BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013765
(437 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 187/354 (52%), Gaps = 13/354 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K+ V PLGVVG I WNYP + A+ +G V+K SE AS + C F +
Sbjct: 141 KSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLEFGEV-- 197
Query: 83 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
VG P +++++TG + G LVS VDKI F GS G +M +A++ + PVTL
Sbjct: 198 -CNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQLVKPVTL 256
Query: 140 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 199
ELGGK +V +DVD+ V + + ++GQ C+ R VH I A FV ++ K K
Sbjct: 257 ELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTK 316
Query: 200 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 258
++ P +G + +K+ ++ A +GA IL GS HL +G Y
Sbjct: 317 NIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKG---YYIE 373
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL AVFS R I
Sbjct: 374 PTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERI 433
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372
++ G +N S P+GG+K SGFGR G G++ +K V +D
Sbjct: 434 TKALEVGAVWVN--CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQD 485
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 197/373 (52%), Gaps = 13/373 (3%)
Query: 1 MHFHSLIHYNVCRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 60
M++ + V + R+ + ++ V P+GVVGAIV+WN P N + A+ +G
Sbjct: 117 MNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCT 176
Query: 61 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVG 118
IV+K + + + A VG PE ++ V+ G ETG+AL S+ +D F G
Sbjct: 177 IVLKPAAETPLTA----NALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTG 232
Query: 119 SPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178
S VGR + R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C
Sbjct: 233 SSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQT 292
Query: 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAE 238
R R Y V+ V V ++ GPP +G L + +++ + +++GA
Sbjct: 293 RILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGAR 352
Query: 239 ILARGSFGHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 297
++ G EG + +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +AN
Sbjct: 353 LVCGGG---RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIAN 409
Query: 298 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV 357
DS YGL +V++ + +I+ QI+ G IN +A + PFGG K+SG GR G
Sbjct: 410 DSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGP 466
Query: 358 EGLRACCLVKSVV 370
EG+ KSV+
Sbjct: 467 EGVEHFTQQKSVL 479
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 186/352 (52%), Gaps = 13/352 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K+ + P+GVV I WNYPF + A+ +G ++K SE AS + C I
Sbjct: 144 KSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVT-CLELGEI-- 200
Query: 83 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
VG P +++++TG E G +L S VDKI F GS G IM A++ + PV+L
Sbjct: 201 -CKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQLVKPVSL 259
Query: 140 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 199
ELGGK +V +DVD+ VA+ V ++GQ C+ R VH I FV ++ K +
Sbjct: 260 ELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAE 319
Query: 200 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFP 258
++ PL +G + +K+ N ++ A +GA IL G HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKG---YFVE 376
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT+I +V +M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 377 PTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERL 436
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
+ +Q G+ IN +++ P+GG+K SGFGR G GL VK V
Sbjct: 437 SKALQAGIVWINCAQPSFI--QAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 187/353 (52%), Gaps = 13/353 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K + P+GVVG I WNYP + A+ +G V+K SE AS + C I
Sbjct: 161 KCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVT-CLELADI-- 217
Query: 83 ALAAVGAPENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
VG P +++++TG A +S+ VDK+ F GS G+ IM +A+ + PVTL
Sbjct: 218 -CKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAPMVKPVTL 276
Query: 140 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 199
ELGGK +V DDVD+ + + ++GQ C+ R +H I F ++ K
Sbjct: 277 ELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAK 336
Query: 200 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-SFGHLSEGAVDQYFP 258
++ PL +G + EK++ +++A +GA IL G HL +G +
Sbjct: 337 NIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGF---FIE 393
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT+I ++ +M++ +EE FGP++ + +F+T++E ++LAND++YGL AV SG + R + +
Sbjct: 394 PTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRL 453
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371
+ +I G +N + CQ+ P+GG K SGFGR G G+ VK V E
Sbjct: 454 SEEIDAGCIWVN-CSQPCFCQA-PWGGNKRSGFGRELGEGGIDNYLSVKQVTE 504
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/353 (34%), Positives = 184/353 (52%), Gaps = 13/353 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K+ V P+GVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 144 KSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLT-CLELGEI-- 200
Query: 83 ALAAVGAPENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
VG P +++++TG E G L + VDK+ F GS G IM A++ + PV+L
Sbjct: 201 -CKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSL 259
Query: 140 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 199
ELGGK +V +DVD+ A+ A+ ++GQ C+ R +H I F++++ K +K
Sbjct: 260 ELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIK 319
Query: 200 SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFG-HLSEGAVDQYFP 258
++ PL +G + EK+ V++A +GA IL GS HL +G +
Sbjct: 320 NIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGF---FIE 376
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT+I +V M++ +EE FGP++ + F+T+EE + LAND+ YGLG AV S R +
Sbjct: 377 PTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERV 436
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371
+ G+ +N S P+GGVK SGFGR G GL VK V +
Sbjct: 437 TKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 182/354 (51%), Gaps = 14/354 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K+ V PLGVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 157 KSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI-- 213
Query: 83 ALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
+G P ++++TG E G L S VDKI F GS G IM A++ + PV+L
Sbjct: 214 -CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSL 272
Query: 140 ELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
ELGGK +V DD+D + A+ + ++GQ C+ R V +I + F+ ++ K
Sbjct: 273 ELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWT 332
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF 257
K++ PL +G + EK+ +++A +GA IL G HL +G Y
Sbjct: 333 KNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYV 389
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R
Sbjct: 390 QPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCER 449
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371
Q G+ IN S LP+GG K SGFGR G GL +K V E
Sbjct: 450 FTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 172/332 (51%), Gaps = 10/332 (3%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGV I++WNYPF A+ GN +V K S +G I A G
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEA----G 209
Query: 89 APENLVDVITGFAETGEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 146
P LV+V+ G AETG L +V K+ F GS G+ +M ++KT+ VTLELGGK
Sbjct: 210 VPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSP 269
Query: 147 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 206
++ D ++ + + A+ A + GQ C R +V R+I F+ +V K K++ G P
Sbjct: 270 LLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329
Query: 207 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVIVN 264
L + MG L +K+ V A +GA +L G S+ + + P V+ N
Sbjct: 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN 389
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
M ++EE FGP+M ++ F+T+EEV++ AN++ +GL VF+ RA +AA ++
Sbjct: 390 CRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEA 449
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 356
G IN ++ + + +PFGG K SGFGR G
Sbjct: 450 GTCYINTYSISPV--EVPFGGYKMSGFGRENG 479
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 187/373 (50%), Gaps = 9/373 (2%)
Query: 1 MHFHSLIHYNVCRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNG 60
M+F L + + ++K+ P+GVV I WNYP + A+ +G
Sbjct: 141 MYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCS 200
Query: 61 IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALV--SSVDKIIFV 117
+V+K SE + F +++ VG P+ +++I G +E G+ + VD + F
Sbjct: 201 LVMKPSEITPLTTIRVFELMEE----VGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFT 256
Query: 118 GSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177
G G+ IM+NA+ +T + LELGGK+ I+ DD D A+ +GQ C+
Sbjct: 257 GGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAG 316
Query: 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA 237
R V I F + VK + G +MG + EH K+++ ++ A +GA
Sbjct: 317 SRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGA 376
Query: 238 EILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAN 297
I G + +F PTVI N + +M+++QEE FGP++ + F T++E ++LAN
Sbjct: 377 TIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLAN 436
Query: 298 DSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGV 357
DS YGL AVFS +A+ +A +++ G INDF Y Q+ P+GG K SG GR G
Sbjct: 437 DSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHP-YFAQA-PWGGYKQSGIGRELGK 494
Query: 358 EGLRACCLVKSVV 370
EGL + K ++
Sbjct: 495 EGLEEYLVSKHIL 507
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 181/354 (51%), Gaps = 14/354 (3%)
Query: 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQA 82
K+ V PLGVVG I WNYP + A+ +G ++K SE AS + C I
Sbjct: 157 KSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASIT-CLELGEI-- 213
Query: 83 ALAAVGAPENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTL 139
+G P ++++TG E G L S VDKI F GS G IM A++ + PV+L
Sbjct: 214 -CREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSL 272
Query: 140 ELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
LGGK +V DD+D + A+ + ++GQ C+ R V +I + F+ ++ K
Sbjct: 273 ALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWT 332
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYF 257
K++ PL +G + EK+ +++A +GA IL G HL +G Y
Sbjct: 333 KNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKG---YYV 389
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGLG AV S R
Sbjct: 390 QPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCER 449
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371
Q G+ IN S LP+GG K SGFGR G GL +K V E
Sbjct: 450 FTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENFLNIKQVTE 501
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 179/348 (51%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTL+LGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ+C+ R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 151 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 206
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 207 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 266
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 267 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 326
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 327 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 380
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 381 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 440
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 441 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 486
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 15/337 (4%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
+K+ V P+GV AI WN+P I + A+ +G IV+K +E+ +S +
Sbjct: 139 NKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLA 198
Query: 81 QAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPV 137
+ A G P+ ++ V+ G + G + S+ V K+ F GS VGR++M ++ T+ +
Sbjct: 199 ERA----GVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKL 254
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
TLELGG FIV DD D+ + A+ + +++GQ C RF+VH +Y F ++A
Sbjct: 255 TLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAA 314
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
V + G +G L +K+++ + DAL KGA ++ G L G +F
Sbjct: 315 VSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHG----FF 370
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
PTV+ V M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL ++S R
Sbjct: 371 EPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWR 430
Query: 318 IAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 353
+A ++ G+ IN SN + PFGGVK SG GR
Sbjct: 431 VAEALEYGMVGINTGLISNEVA---PFGGVKQSGLGR 464
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG G+ G GL+A VK+V
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGQELGEYGLQAYTEVKTVT 492
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 181/349 (51%), Gaps = 20/349 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 261
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 321
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 322 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
+Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 180/349 (51%), Gaps = 20/349 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
I+ D D+ + A A + GQ CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 261
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 321
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 322 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
+Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVKTVT 492
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 173/340 (50%), Gaps = 18/340 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIY FV + KS G
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTVF 386
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++ +
Sbjct: 387 GDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQAL 446
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 362
Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 447 QAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 178/348 (51%), Gaps = 18/348 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 156 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 211
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P +V+VI GF T A ++S VDK+ F GS VG +I A K+ L VTLE+GGK
Sbjct: 212 FPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGK 271
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + A A + GQ C R +V DIYA FV + KS G
Sbjct: 272 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG 331
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + + G +K+ + ++G ++L G A D+ + PTV
Sbjct: 332 NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG------AAADRGYFIQPTVF 385
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
++ M + +EE FGP+M I+KF + EEVV AN+S+YGL AVF+ +A ++ +
Sbjct: 386 GDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQAL 445
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G +N + + QS PFGG K SG GR G GL+A VK+V
Sbjct: 446 QAGTVWVNCY-DVFGAQS-PFGGYKLSGSGRELGEYGLQAYTEVKTVT 491
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 186/358 (51%), Gaps = 24/358 (6%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
+++A + + +GVVG I WN+P + + ++ A+ +G +V+K SE A S + I+
Sbjct: 152 NEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEIL 211
Query: 81 -QAALAAVGAPENLVDVITG-FAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTP 136
+AAL P + ++I G A G L + D I F GS G+ I +NAS TL
Sbjct: 212 DEAAL-----PSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKR 266
Query: 137 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 196
V LELGGK A I+ D D+ + Q VR +SGQ+C R V + IY +
Sbjct: 267 VCLELGGKGANIIFADADIDAL-QRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKD 325
Query: 197 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256
I + GP +G + E +K+Q+L+ +D+GA ++ G+ L G Y
Sbjct: 326 IAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT--GLPMGMERGY 383
Query: 257 F-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 315
+ PTV +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL + S + +
Sbjct: 384 YVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKC 443
Query: 316 REIAAQIQCGVAAINDFASNYMCQSLP----FGGVKDSGFGRFAGVEGLRACCLVKSV 369
R IAAQ++ G+ +N LP FGGVK SG R G+ G++ K++
Sbjct: 444 RRIAAQVRSGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 14/346 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ GN +VIK +E S + +I+ A G
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEA----G 211
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P +V+++ G+ T A ++S +DKI F GS VG++I A ++ L VTLELGGK
Sbjct: 212 FPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGK 271
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ + + A + + GQ C R +V IY FV + + K G
Sbjct: 272 SPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVG 331
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
P + G + K+ L+ + +GA++ G G + PTV N
Sbjct: 332 SPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK----GLGRKGFFIEPTVFSN 387
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V M++ +EE FGP+ I++F T +EV++ AN+S +GL AVF+ ++A +++ +Q
Sbjct: 388 VTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQA 447
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
G IN + N + PFGG K SG GR G GLR VK+V
Sbjct: 448 GTVWINCY--NALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVT 491
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 177/341 (51%), Gaps = 20/341 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ +GN +V+KV+E + + +I+ A G
Sbjct: 157 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEA----G 212
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGK 144
P +V+++ GF T A ++S VDK+ F GS +GR+I A S L VTLELGGK
Sbjct: 213 FPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGK 272
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
I+ D D+ + A A + GQ +CAG+ R +V DIY FV + KS
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYDEFVERSVARAKSRVV 331
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTV 261
G P K + G +K+ +N +GA++L G A D+ + PTV
Sbjct: 332 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI------AADRGYFIQPTV 385
Query: 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQ 321
+V M + +EE FGP+M I+KF T EEVV AN+S YGL AVF+ +A ++
Sbjct: 386 FGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQA 445
Query: 322 IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 362
+Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 446 LQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I+ WN+P + A+ GN +V+K +E + +I+ A G
Sbjct: 158 EPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEA----G 213
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P +V+++ G+ T A +SS VDK+ F GS VG++I A K+ L V+LELGGK
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGK 273
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
IV D D+ + + A + GQ C A R +V IY FV + + K G
Sbjct: 274 SPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL G E EK+ +L+ +GA++ G G + PTV +
Sbjct: 334 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSD 389
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V M++ +EE FGP+ IMKF + ++V+K AN++ YGL +F+ +A +++ +Q
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQS 449
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
G +N ++ + PFGG K SG GR G G VK+V
Sbjct: 450 GTVWVNCYS--VVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 14/347 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 195
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 196 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 255
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 256 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 373
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 374 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 433
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 434 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 14/347 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 16/335 (4%)
Query: 31 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 90
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 91 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 147
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPA 258
Query: 148 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 208 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
A + D MG L E+++ V A+++GA + +FG + Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDV 373
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 360
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 178/335 (53%), Gaps = 16/335 (4%)
Query: 31 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 90
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 91 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 147
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPA 258
Query: 148 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 208 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
A + D MG L E+++ V A+++GA + +FG + Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV----AFGGKAVEGKGYYYPPTLLLDV 373
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M +M EE FGP++P++ F+T E+ + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 360
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 179/335 (53%), Gaps = 16/335 (4%)
Query: 31 LGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAP 90
LGV I+ WN+PF I M A+ +GN IVIK SE + + +I+ +G P
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLP 198
Query: 91 ENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 147
+ +++ G ET G+ L + V + GS G IM A+K +T V LELGGK
Sbjct: 199 RGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPA 258
Query: 148 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
IV DD D+ + V + + +SGQ C AER YV + IY FV+++ + +++V G P
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP- 317
Query: 208 AGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
A + D MG L E+++ V A+++GA + A G G EG Y+PPT++++V
Sbjct: 318 AERNDIAMGPLINAAALERVEQKVARAVEEGARV-ALG--GKAVEGK-GYYYPPTLLLDV 373
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M +M EE FGP++P++ F+T EE + +ANDS YGL ++++ + + A + ++ G
Sbjct: 374 RQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 360
IN N+ G + SG G G GL
Sbjct: 434 ETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 179/376 (47%), Gaps = 23/376 (6%)
Query: 2 HF----HSLIHYNVCRSSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFS 57
HF +L +Y G ++ K+A +GV G I WN+P + + AA +
Sbjct: 113 HFVAARDALDNYEFEERRGDDLVVKEA------IGVSGLITPWNFPTNQTSLKLAAAFAA 166
Query: 58 GNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF-AETGEALVS--SVDKI 114
G+ +V+K SE ++ I+ VG P+ + +++ G A G L V
Sbjct: 167 GSPVVLKPSEETPFAAV----ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXX 222
Query: 115 IFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 174
F GS G I A+K V+LELGGK +IV DDVD+ A+ + ++GQ C
Sbjct: 223 SFTGSGPTGSKIXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVC 282
Query: 175 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD 234
R V I F++++ + V G P +G + + +++QN +N ++
Sbjct: 283 TAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIE 342
Query: 235 KGAEILARGSFGHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV 293
+GAE+ G EG YF PT+ +NV++ + QEE FGP+ ++ +N +E +
Sbjct: 343 EGAELFYGGP--GKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAI 400
Query: 294 KLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 353
++AND++YGL V + ++A I+ G IN+ LPFGG K SG GR
Sbjct: 401 QIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGR 457
Query: 354 FAGVEGLRACCLVKSV 369
G G+ VKS+
Sbjct: 458 EWGDYGIEEFLEVKSI 473
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 195
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ LGGK
Sbjct: 196 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGK 255
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ A IAV A SSGQ C R ++HR A F ++V + V+ + G
Sbjct: 256 SPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLG 315
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 316 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 373
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 374 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 433
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 434 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 478
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ A IAV A SSGQ R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 168/354 (47%), Gaps = 22/354 (6%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
+ PLGVV I +WNYPF+ PM+ A+ +GN +V+K SE + II L
Sbjct: 116 IHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD 175
Query: 86 AVGAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 144
++L VI G ET E L D I++ GS GVG++IM A+K LTPVTLELGGK
Sbjct: 176 -----KDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGK 230
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
V + D+ + +SGQ C + I V ++ K +K G
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
D G + H +++ L+ + +A G G A +Y PT++ +
Sbjct: 290 EDAKKSRDYGRIISARHFQRVMGLIE------GQKVAYGGTGD----AATRYIAPTILTD 339
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V+ +MQEE FGP++PI+ + EE ++ N L +FS + +++ A+
Sbjct: 340 VDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSS 399
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL-----RACCLVKSVVEDR 373
G A ND + SLPFGGV +SG G + G + R CLV+ ++ D
Sbjct: 400 GGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDE 453
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
PLGVV I +WNYP A+ +GN ++ K SE + I A G
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA----G 196
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P+ + +V+TG E G+ L ++KI F G G+ +M +AS + L VT+ELGGK
Sbjct: 197 VPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGK 256
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ A IAV A SSGQ R ++HR A F ++V + V+ + G
Sbjct: 257 SPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLG 316
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ--YFPPTVI 262
P + G L H E + + + A +L G +++GA + Y PTV
Sbjct: 317 DPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVTDGAFGKGAYVAPTVF 374
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
+ M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V + RA ++
Sbjct: 375 TDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRL 434
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ IN + + +P GG K SG GR G+ L +KSV
Sbjct: 435 EAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 26/369 (7%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
+ PLGVV I +WNYPF+ PM+ AV +GN +++K SE + + + A L
Sbjct: 99 IHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSG-----HMADLLATLI 153
Query: 86 AVGAPENLVDVITG-FAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 144
+NL V+ G ET E L D I++ GS VG+++M A+K LTPVTLELGGK
Sbjct: 154 PQYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGK 213
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
V D D+ + +SGQ C + I V ++ K +K G
Sbjct: 214 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 272
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
D G + H ++++ L+++ ++ G++ S +Y PT++V+
Sbjct: 273 EDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTWDQSS-----RYIAPTILVD 322
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V+ +MQEE FGP+MPI+ + EE ++ N L VFS ++ +++ A+
Sbjct: 323 VDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSS 382
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL-----RACCLVKSVVEDR----WW 375
G ND + +LPFGGV +SG G + G + R CLVKS++ + +
Sbjct: 383 GGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARY 442
Query: 376 PYIKTKIPK 384
P K+P+
Sbjct: 443 PPSPAKMPR 451
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G I WN P + + A+ GN +++K +E + +I+ A G
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEA----G 213
Query: 89 APENLVDVITGFAETGEALVSS---VDKIIFVGSPGVGRMIMRNASKT-LTPVTLELGGK 144
P +V+++ G+ T A +SS VDK+ F GS VG+MI A+K+ L VTLELG K
Sbjct: 214 FPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAK 273
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
+ IV D D+ + A + + GQ+C A + +V IY FV + + K G
Sbjct: 274 NPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFG 333
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G K+ L+ +GA++ G G + PTV N
Sbjct: 334 NPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGG----PWGNKGYFIQPTVFSN 389
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V M++ +EE FGP+ IMKF + +EV+K AN++ YGL VF+ +A +++ +Q
Sbjct: 390 VTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQA 449
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
G +N + + QS P GG K SG GR G G+ VK+V
Sbjct: 450 GTVWVNCYLA-ASAQS-PAGGFKMSGHGREMGEYGIHEYTEVKTVT 493
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 164/356 (46%), Gaps = 20/356 (5%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
P +VG I WN+P + A+ +G +V+K SE A R + L A+
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAP-------RFVAPLLXALNT 178
Query: 90 PENLVDV---ITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 146
L DV + G ETG L++ VD + F GS GR + A++ P LELGGKD
Sbjct: 179 VPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDP 238
Query: 147 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 206
IV + ++ + A+ ++GQ+C ER YV + F Q+ + P
Sbjct: 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYP 298
Query: 207 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVN 266
L +G + + + + + + DA++KGA I G L G + PTV NVN
Sbjct: 299 LVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGG---WWCRPTVXTNVN 355
Query: 267 HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGV 326
H+ K+ EE FGPI P+ F EE V LAND+ YGL AVF+GS+ A ++A Q+ G
Sbjct: 356 HSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGA 415
Query: 327 AAINDFASNYMCQSLPFGGVKDSGF-GRFAGVEGLR------ACCLVKSVVEDRWW 375
+IND A SG G G GL+ A + + D WW
Sbjct: 416 ISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWW 471
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 172/368 (46%), Gaps = 23/368 (6%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
PLGV I +WNYP A+ +GN +V K SEN I+ A G
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEA----GL 205
Query: 90 PENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAF 147
P+ L +VI G +TG LV+ D K+ GS GR + A+ L VT+ELGGK
Sbjct: 206 PKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPM 265
Query: 148 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
IV DD D+ A+ SSGQ C+ R +V + A F+ + + +++ G PL
Sbjct: 266 IVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325
Query: 208 AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH--LSEGAVDQYFPPTVIVNV 265
+G L EK+ + + +GA ++ G + EGA Y PTV +V
Sbjct: 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA---YVQPTVFADV 382
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M + +EE FGP+M ++ F+ ++EV+ AN + +GL VF+ RA + ++ G
Sbjct: 383 TDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAG 442
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKP 385
IN + N +PFGG K SGFGR L +K+V Y+ T
Sbjct: 443 TLWINTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTV-------YVST---GK 490
Query: 386 IQYPVAEN 393
+ P AEN
Sbjct: 491 VDAPYAEN 498
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 168/329 (51%), Gaps = 15/329 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV AI WN+P I A+ +G +V+K + +S + + A+ A G
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-G 199
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 145
P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG
Sbjct: 200 VPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNA 259
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + + G
Sbjct: 260 PFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
L +G L + K++ + DAL+KGA ++ G H G +F PT++V+V
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDV 375
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G
Sbjct: 376 PANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYG 435
Query: 326 VAAIND-FASNYMCQSLPFGGVKDSGFGR 353
+ IN SN + PFGG+K SG GR
Sbjct: 436 IVGINTGIISNEVA---PFGGIKASGLGR 461
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 168/329 (51%), Gaps = 15/329 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV AI WN+P I A+ +G +V+K + +S + + A+ A G
Sbjct: 144 QPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA---LALAELAIRA-G 199
Query: 89 APENLVDVITGFA-ETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 145
P + +V+TG A G L S+ V K+ F GS +GR +M +K + V+LELGG
Sbjct: 200 VPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNA 259
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
FIV DD D+ + A+ + +++GQ C A R YV +Y F ++ + + + G
Sbjct: 260 PFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
L +G L + K++ + DAL+KGA ++ G H G +F PT++V+V
Sbjct: 320 GLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-AHERGG---NFFQPTILVDV 375
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
K+ +EE FGP+ P+ +F + +V+ AND+ +GL ++ R + ++ G
Sbjct: 376 PANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYG 435
Query: 326 VAAIND-FASNYMCQSLPFGGVKDSGFGR 353
+ IN SN + PFGG+K SG GR
Sbjct: 436 IVGINTGIISNEVA---PFGGIKASGLGR 461
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 172/347 (49%), Gaps = 22/347 (6%)
Query: 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 81
K A VE PLGVV AI +NYP + + A+ +GN +V K + S SG
Sbjct: 144 KIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVE--- 200
Query: 82 AALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVT 138
ALA GAPE ++ V+TG G+ LV +D I F G G I A + PV
Sbjct: 201 -ALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVV 257
Query: 139 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
LELGGKD IV DD D+ A V A SGQ C +R +V + V+ + ++V
Sbjct: 258 LELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELV 317
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258
+ ++ G P D+ + + + +Q L++DAL+ GA +L+ G+ +G
Sbjct: 318 EQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLS----GNKRQG---NLLS 369
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT++ +V M++ EE FGP++PI++ E + L+N S YGL ++F+ RA I
Sbjct: 370 PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINI 429
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 365
++ G IN + PF GVK SG GV+G++ L
Sbjct: 430 GKHLEVGTVHIN-AKTERGPDHFPFLGVKKSGL----GVQGIKPSLL 471
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 168/338 (49%), Gaps = 12/338 (3%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
V + P+GV G IV WN+P I + AA+ +G VIK + + +F +
Sbjct: 143 VHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDK--- 199
Query: 86 AVGAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELG 142
+ P+ V+++ G A G+ L D + F GS VGR ++ + ++ + + LELG
Sbjct: 200 -LDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVKKLALELG 258
Query: 143 GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 202
G FIV DD D+ A + + GQ C A R +VH + F ++A+ V +
Sbjct: 259 GNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXT 318
Query: 203 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI 262
G D+G L + +K++ + DALDKGA ++A L +G +FPPTV+
Sbjct: 319 VGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGL---FFPPTVV 375
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V+ QEE FGP++P F T+EEV+ ND+ +GL VF+ RA+ +AA +
Sbjct: 376 QGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGL 435
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 360
+ G N PFGG K SG GR G+EGL
Sbjct: 436 RFGHVGWN--TGTGPTPEAPFGGXKASGIGREGGLEGL 471
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 168/347 (48%), Gaps = 14/347 (4%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
P G VG I WN P + A+ GN +V+K +E + ++ I++ A
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEA----DL 217
Query: 90 PENLVDVITGFAE-TGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 146
P + +++ GF E G ALV+ V + G G+++MRNA+ L ++ ELGGK
Sbjct: 218 PPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSP 277
Query: 147 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 206
+V D D+ V +G+ C + R V I+ FV +V + +++ G P
Sbjct: 278 ALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337
Query: 207 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD----QYFPPTVI 262
L + ++G L EH +++ V +GA +L G S D Y PTV
Sbjct: 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397
Query: 263 VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V NH MK+ QEE FGP++ + F +EE ++ AND++YGL VF+ RA +A ++
Sbjct: 398 VGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALEL 456
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+ G+ +N + N PFGGVK SG R G L +K++
Sbjct: 457 EAGMVYLN--SHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 13/355 (3%)
Query: 21 HKKAKVEFH--PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 78
++ K+ H P GVV I +WN+P + A+ +GN +V+K ++ + R
Sbjct: 137 NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGR 196
Query: 79 IIQAALAAVGAPENLVDVITGFAET-GEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 135
I + A G P+ +++VI G G+ L S I GS G+ I + +++ +T
Sbjct: 197 IAKEA----GLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMT 252
Query: 136 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 195
PV LELGGK +V DD D+ A+ A+ + GQ C ER YVH +Y F+++
Sbjct: 253 PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFL 312
Query: 196 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 255
+VK + G P+ MG C + + ++V++A+ +GA + G +
Sbjct: 313 PLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGC 372
Query: 256 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA 315
++ PTV+V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL V + S
Sbjct: 373 WYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANI 432
Query: 316 REIAAQIQCGVAAINDFASNYMCQSLPF-GGVKDSGFGRFAGVEGLRACCLVKSV 369
+ + ++ G IN Q F G K SGFG G GL K+V
Sbjct: 433 NQAISDLEVGEVYINRGMGE---QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 182/359 (50%), Gaps = 26/359 (7%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
K A V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 81 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 137
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLI 359
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 372
IA Q++ G IN+ + + PF G K SG AG++G++ A VKSVV D
Sbjct: 420 IAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 182/359 (50%), Gaps = 26/359 (7%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
K A V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 81 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 137
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPI 247
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLI 359
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 372
IA Q++ G IN+ + + PF G K SG AG++G++ A VKSVV D
Sbjct: 420 IAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 14/334 (4%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV+ A WN+P + + GN I++K + N S +II+ A GAPE
Sbjct: 125 GVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRA----GAPE 180
Query: 92 -NLVDVITGFAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 149
+L+++ + + + + + + GS G + A K L T ELGG DAFIV
Sbjct: 181 GSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIV 240
Query: 150 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 209
DD D + + A + GQ C ++R V + Y + ++ + ++ AG PL
Sbjct: 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEA 300
Query: 210 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL-SEGAVDQYFPPTVIVNVNHT 268
+ + EKL+ V +A+D GA++ + + + S+GA +F PT++ ++
Sbjct: 301 DTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQ--YPEIDSKGA---FFRPTILTDIAKD 355
Query: 269 MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAA 328
+ +E FGPI + D ++LANDS YGLG +V RA++++AQI+ G
Sbjct: 356 NPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGXTV 415
Query: 329 INDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 362
IN LPFGG+K SG+GR GL A
Sbjct: 416 IN--GRWITSGELPFGGIKKSGYGRELSGLGLXA 447
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 173/345 (50%), Gaps = 15/345 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+G+VGAI +N+P + + + A+ +GN IV S A +II+ AL
Sbjct: 129 EPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYN 188
Query: 89 APENLVDVITGFAET-GEALV--SSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 145
P + +++TG E G+ +V V+ I F GS VG +I + A + LELGG +
Sbjct: 189 VPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVN 246
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
IV D D+ ++ + +GQ C V I F+ K ++ G
Sbjct: 247 PNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGN 306
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
PL K D+G L +EH+E ++ +V A+D+G ++L G F PT I+ V
Sbjct: 307 PLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK-------ALFYPT-ILEV 358
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
+ L + E F P++PI++ N +EE++ +AN + YGL A+F+ +++ + A ++ G
Sbjct: 359 DRDNILCKTETFAPVIPIIRTN-EEEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFG 417
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
IND +S + ++PFGGVK SG GR + +K+++
Sbjct: 418 GVVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 26/359 (7%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
K A V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 81 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 137
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
L LGGKD+ IV +D D+ A+ + A SGQ C +R V + V ++ +
Sbjct: 248 MLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREK 307
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLI 359
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 372
IA Q++ G IN+ + + PF G K SG AG++G++ A VKSVV D
Sbjct: 420 IAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 26/359 (7%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
K A V P+G+V AI +NYP + + + A+ +GN I K S SG ++
Sbjct: 134 KKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL----LL 189
Query: 81 QAALAAVGAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV 137
A A G P + + ITG +E G+ +V +V+ I F GS G+G I + A + P+
Sbjct: 190 AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPI 247
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
LELGGKD+ IV +D D+ A+ + A SGQ +R V + V ++ +
Sbjct: 248 MLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREK 307
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 308 VLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG---NLI 359
Query: 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 317
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+ RA
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 318 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSVVED 372
IA Q++ G IN+ + + PF G K SG AG++G++ A VKSVV D
Sbjct: 420 IAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSVVFD 473
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 175/340 (51%), Gaps = 19/340 (5%)
Query: 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 81
++A V P+GV I WN+P I + AA+ +G +V+K +E+ +S +
Sbjct: 138 RRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELAS 197
Query: 82 AALAAVGAPENLVDVI----TGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 135
A G P + +VI E GEA+ + V KI F GS G++++ +A+ ++
Sbjct: 198 QA----GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 253
Query: 136 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 195
V++ELGG FIV D +V A+ + +++GQ C + +F V R I+ FV A
Sbjct: 254 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313
Query: 196 KIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 254
+ +K ++ G G L + EK++ VNDA+ KGA ++ G L +
Sbjct: 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK---- 369
Query: 255 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 314
+F PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL +S +
Sbjct: 370 NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429
Query: 315 AREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 353
+A Q++ G+ +N+ S+ C PFGGVK SG GR
Sbjct: 430 IWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGR 466
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 178/361 (49%), Gaps = 15/361 (4%)
Query: 14 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 73
++G + + + PLGVV +I WNYP + A+ +GN +V+K SE +
Sbjct: 143 AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 202
Query: 74 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNA 130
+ A LA P +V+++ G +T G+ L V + GS G I+ +
Sbjct: 203 -----LKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 131 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 190
+ ++ +ELGGK IV DD D+ V + ++GQ+C A R Y + IY
Sbjct: 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL 317
Query: 191 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 250
V ++ V ++ +G P ++G L L H E++ V +A G + G
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 377
Query: 251 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 310
G Y+ PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL +V++
Sbjct: 378 G---YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK 434
Query: 311 SQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
RA ++A++Q G +N +++M S +P GG K SG+G+ + GL +V+ V
Sbjct: 435 DVGRAHRVSARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
Query: 370 V 370
+
Sbjct: 492 M 492
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRII 80
+++A +E+ PLGV+ AI WN+P + + + +GN ++K + N + GC + I
Sbjct: 117 NQQAVIEYRPLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVT--GCA--QXI 172
Query: 81 QAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVT 138
LA G P + + E ++ + + GS G I A L
Sbjct: 173 ARILAEAGTPAGVYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCV 232
Query: 139 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
LELGG D FIV +D D+ + AV Q++GQ CA A+RF V I F +
Sbjct: 233 LELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAA 292
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258
++ G PL + D+G + ++L V ++ +GA +L G Y+
Sbjct: 293 AALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLL----LGGEKIAGEGNYYA 348
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
TV+ +V ++E FGP+ I + LANDS +GL +F+ A E
Sbjct: 349 ATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEX 408
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373
AA+++CG IN ++++ + FGGVK SGFGR GL C V++V ++R
Sbjct: 409 AARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 168/360 (46%), Gaps = 15/360 (4%)
Query: 14 SSGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG 73
++G + + + P+G+VG+I WNYP + A+ GN +V K SE +
Sbjct: 145 AAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTA 204
Query: 74 CFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVS--SVDKIIFVGSPGVGRMIMRNA 130
R+I L PE +V+VITG ET G AL++ V + G G+ ++ A
Sbjct: 205 LKLARLIADIL-----PEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAAA 259
Query: 131 SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALF 190
+KT+ LELGGK IV D D+ V ++GQ+C A R Y IY
Sbjct: 260 AKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL 319
Query: 191 VSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLS 249
V+ + V ++ + ++G L +++ + V A D K EI G G
Sbjct: 320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS-D 378
Query: 250 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 309
EG +F PTV+ ++++ E FGP++ + +F ++ V ANDS YGL +V++
Sbjct: 379 EGF---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWT 435
Query: 310 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
+A A+++Q G IN + P GG+K SG+G+ V L V+ +
Sbjct: 436 KDISKAXRAASRLQYGCTWINTHFX--LTNEXPHGGIKQSGYGKDXSVYALEDYTAVRHI 493
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 165/362 (45%), Gaps = 17/362 (4%)
Query: 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 81
K K+ PLGV+ +I +N+P + + A+ GN +V K + SG II
Sbjct: 135 KTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG---TIIA 191
Query: 82 AALAAVGAPENLVDV-ITGFAETGEALVSS-VDKII-FVGSPGVGRMIMRNASKTLTPVT 138
A G P +++V +T E G+ ++++ + ++I F GS VGR I A + +
Sbjct: 192 KAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMA 251
Query: 139 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
LELGG + F V D DV A+ GQ C R VH+D+Y FV + V
Sbjct: 252 LELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARV 311
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258
K + G K +G L EK ++ A G E+ G V
Sbjct: 312 KQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNVLT 364
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
P V V ++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+ + +
Sbjct: 365 PYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKF 424
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG---VEGLRACCLVKSVVEDRWW 375
A QI G+ +ND + N ++ FGG K SG GRF VE + + R +
Sbjct: 425 ALQIDSGMTHVNDQSVND-SPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRKY 483
Query: 376 PY 377
P+
Sbjct: 484 PF 485
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 174/340 (51%), Gaps = 19/340 (5%)
Query: 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQ 81
++A V P+GV I WN+P I + AA+ +G +V+K +E+ +S +
Sbjct: 138 RRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELAS 197
Query: 82 AALAAVGAPENLVDVI----TGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLT 135
A G P + +VI E GEA+ + V KI F GS G++++ +A+ ++
Sbjct: 198 QA----GIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVK 253
Query: 136 PVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 195
V++ELGG FIV D +V A+ + +++GQ + +F V R I+ FV A
Sbjct: 254 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFVKAFA 313
Query: 196 KIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 254
+ +K ++ G G L + EK++ VNDA+ KGA ++ G L +
Sbjct: 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGK---- 369
Query: 255 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 314
+F PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL +S +
Sbjct: 370 NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQ 429
Query: 315 AREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 353
+A Q++ G+ +N+ S+ C PFGGVK SG GR
Sbjct: 430 IWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGR 466
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 170/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 169/330 (51%), Gaps = 19/330 (5%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV AI WN+P I A+ +G ++++ ++ + + + A G
Sbjct: 167 QPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKA----G 222
Query: 89 APENLVDVITGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 145
P ++ ++TG A E G L S +V K+ F GS VGR++M + T+ ++LELGG
Sbjct: 223 IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNA 282
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
FIV DD D+ A+ + +++GQ C A R YV R +Y F ++A VK + G
Sbjct: 283 PFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGN 342
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS-FGHLSEGAVDQYFPPTVIVN 264
+G + + K++ + DA+ KGA+++ G G L +F P ++
Sbjct: 343 GTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGL-------FFEPGILTG 395
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324
V M + +EE FGP+ P+ F+T+EEV+ AND+ +GL ++ + RA ++ ++
Sbjct: 396 VTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEY 455
Query: 325 GVAAIND-FASNYMCQSLPFGGVKDSGFGR 353
G+ N SN + PFGGVK SG GR
Sbjct: 456 GMVGHNTGLISNEVA---PFGGVKQSGLGR 482
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 170/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L+LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+NC A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+LELGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 162/344 (47%), Gaps = 12/344 (3%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GVVG I WN+PF + A+ SG +V+K SE S + R+ + A A G
Sbjct: 160 EPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS---IRLAELAREA-G 215
Query: 89 APENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKD 145
P+ + +V+TG+ + G+ L +VD + F GS VG + A++T+ V LELGGK
Sbjct: 216 IPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKG 275
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
IV D D+ A ++GQ C R V I ++ I + V+ G
Sbjct: 276 PQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGD 335
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
PL + +GA H+EK+ + V + GAE+L G G Y+ PTV V
Sbjct: 336 PLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGL---YYAPTVFAGV 392
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
+ +EE FGP++ + F T +E V LAN + +GL +V+S + A + +I+ G
Sbjct: 393 TPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAG 452
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 369
IN LP GG K SG GR G G K V
Sbjct: 453 RCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 168/348 (48%), Gaps = 16/348 (4%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+GV G ++ WNYP + A + +GN +VIK ++ + + + A G
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKA----G 232
Query: 89 APENLVDVITGFAE-TGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKTLTPVTLELGGK 144
P+ +V+++ G G+ L D KI F GS VG+ IM++ A + V+L LGGK
Sbjct: 233 IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGK 292
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
I+ D D+ Q+ + + + G+N A R +V I+ FV +V + V+ + G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
PL + G H KL + +GA ++ G+ + +F PTV +
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN--QVPRPGF--FFQPTVFTD 408
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIAAQI 322
V M + +EE+FGPIM I +F + V+ AN + +GL VF+ ++A ++ ++
Sbjct: 409 VEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKL 468
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
Q G IN + N + PFGG K SGFG+ G L +K+V
Sbjct: 469 QAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 153/328 (46%), Gaps = 18/328 (5%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
P GV I +NYP + P++ A+ GN +IK SE + +II A A
Sbjct: 130 PYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA---- 185
Query: 90 PENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 149
PE + + G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV
Sbjct: 186 PEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIV 245
Query: 150 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 209
D D+ + +SGQ C + YVH Y++ + + ++V+ V P
Sbjct: 246 LPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVH---YSVKDALLERLVERVKTELP--- 299
Query: 210 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 269
++ + L ++Q LV+ ++L GS +S+ A+ TV+ V
Sbjct: 300 --EINSTGKLVTERQVQRLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWND 352
Query: 270 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAA 328
LM EE FGPI+P+++F++ + N L VF A+ I QIQ G A
Sbjct: 353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ 412
Query: 329 INDFASNYMCQSLPFGGVKDSGFGRFAG 356
+N + LPFGG+ SG G + G
Sbjct: 413 VNGVMLHAFSPYLPFGGIGASGMGEYHG 440
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 152/328 (46%), Gaps = 18/328 (5%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
P GV I +NYP + P++ A+ GN +IK SE + +II A A
Sbjct: 130 PYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFA---- 185
Query: 90 PENLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIV 149
PE + + G E L D I F GSP VG+++M+ A+K LTPV LELGGK IV
Sbjct: 186 PEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIV 245
Query: 150 CDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAG 209
D D+ + +SGQ + YVH Y++ + + ++V+ V P
Sbjct: 246 LPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVH---YSVKDALLERLVERVKTELP--- 299
Query: 210 KYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 269
++ + L ++Q LV+ ++L GS +S+ A+ TV+ V
Sbjct: 300 --EINSTGKLVTERQVQRLVSLLEATQGQVLV-GSQADVSKRALSA----TVVDGVEWND 352
Query: 270 KLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGLGCAVFSGSQHRAREIAAQIQCGVAA 328
LM EE FGPI+P+++F++ + N L VF A+ I QIQ G A
Sbjct: 353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ 412
Query: 329 INDFASNYMCQSLPFGGVKDSGFGRFAG 356
+N + LPFGG+ SG G + G
Sbjct: 413 VNGVMLHAFSPYLPFGGIGASGMGEYHG 440
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 18/338 (5%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ P GV I WN+ F + +A + +GN +V+K + A + +++ +
Sbjct: 170 YTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEES---- 225
Query: 88 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVT 138
G P+ +V+ + G AE G+ LV I F GS VG I A+K L V
Sbjct: 226 GLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVI 285
Query: 139 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
E+GGKD +V +D D+ AQ +A +GQ C+ R VH +Y + +V +I
Sbjct: 286 AEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258
+S G P + MG + K+ + + ++G L G G S+G +
Sbjct: 346 ESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDDSKG---YFIE 400
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT+ +++ +LMQEE FGP++ K ++ +E +++AN++ YGL AV + ++
Sbjct: 401 PTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRA 460
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 356
+ G N + + PFGG K SG AG
Sbjct: 461 KQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 18/338 (5%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ P+GV I WN+ + +A + +GN +V+K + + +++ A
Sbjct: 170 YTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDA---- 225
Query: 88 GAPENLVDVITGF-AETGEALVS--SVDKIIFVGSPGVG-RM-----IMRNASKTLTPVT 138
G P+ +++ + G AE G+ LV I F GS VG R+ ++R L V
Sbjct: 226 GLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVI 285
Query: 139 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
+E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D+Y + + +
Sbjct: 286 VEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALA 345
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258
K+++ G P MG + + EK+ + + +G L G G S G +
Sbjct: 346 KNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGEGDSSTGF---FIQ 400
Query: 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREI 318
PT+I +++ +MQEE FGP++ K N + +++AN++ YGL AV + ++ +
Sbjct: 401 PTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQA 460
Query: 319 AAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 356
+ G N + + PFGG K SG AG
Sbjct: 461 KREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 162/349 (46%), Gaps = 24/349 (6%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIK-VSENASWSGCFYFRIIQAALAAVGAP 90
GVVG I WN+P + + A+ GN +VIK S+ G RI + A G P
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEA----GVP 205
Query: 91 ENLVDVITGF-AETGEALVS-SVDKII-FVGSPGVGRMIMRNA--SKTLTPVTLELGGKD 145
++ + G +E G+ V+ +V K+I F GS VGR + A + V LELGG
Sbjct: 206 AGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNA 265
Query: 146 AFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
F+V D D+ AQ A A GQ C R V ++ F+ + + VK++ G
Sbjct: 266 PFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
P A +G + L+ + A +GA + G EG + P V +V
Sbjct: 326 PSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EG---RLVHPHVFSDV 378
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M++ +EE FGP++ ++K + + +LAN S +GL AV+S RA + A QI G
Sbjct: 379 TSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSG 438
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374
+ IND N + FGG K+SG GRF G ++ DRW
Sbjct: 439 MVHINDLTVNDEPHVM-FGGSKNSGLGRFNG------DWAIEEFTTDRW 480
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 18/350 (5%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 86 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 143
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 144 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 262
G P D+G L +++ + DA++KG +LA G L Y PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVE 380
Query: 263 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 320
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 321 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 18/350 (5%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 86 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 143
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 144 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 262
G P D+G L +++ + DA++KG +LA G L Y PT++
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTLVE 380
Query: 263 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 320
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 321 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 150/350 (42%), Gaps = 18/350 (5%)
Query: 26 VEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALA 85
V PLGVV AI +NYP + N + + GN +V+K S + + AL
Sbjct: 153 VRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK----ALL 208
Query: 86 AVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGG 143
G P + + ++ + E +V+ V + F GS VG +++ + +ELGG
Sbjct: 209 DAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGG 266
Query: 144 KDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSA 203
D IV +D D+ A R +GQ C + R +Y V +VAK + S+
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRV 326
Query: 204 GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVI- 262
G P D+G L +++ + DA++KG +LA G L Y PT +
Sbjct: 327 GDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYVQPTFVE 380
Query: 263 --VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 320
+ M L + E F P+ ++ ++ ++LAN YGL AVF + R
Sbjct: 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVR 440
Query: 321 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370
++ G IND + PFGG K SG R + A K++V
Sbjct: 441 LLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 9/339 (2%)
Query: 27 EFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA 86
+++P+G+VG I ++N+P A+ GN + K + + +I+ L
Sbjct: 152 QWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQ 211
Query: 87 VGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK 144
P + + G A+ G A+ VD + F GS VG+M+ + LELGG
Sbjct: 212 NNLPGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGN 271
Query: 145 DAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
+A IV +D D+ V AV A++ ++GQ C R +H ++ V ++AK K V G
Sbjct: 272 NAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIG 331
Query: 205 PPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVN 264
P G L + ++ + A +G ++ G Y PT+I
Sbjct: 332 DPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRP----GNYVEPTIITG 387
Query: 265 VNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-REIAAQ-I 322
+ H ++ E F PI+ ++KF T+EE N+ + GL ++F+ R R + +
Sbjct: 388 LAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGS 447
Query: 323 QCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 361
CG+ +N S FGG K +G GR +G + +
Sbjct: 448 DCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDSWK 485
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 88 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 137
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
+E GGKDA IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 258 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 316
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 317 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 371
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 14/351 (3%)
Query: 15 SGRSMIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGC 74
SG ++I +++P+G+VG I ++N+P A+ GN + K + S
Sbjct: 147 SGHALIE-----QWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201
Query: 75 FYFRIIQAALAAVGAPENLVDVITGFAETGEALVSS--VDKIIFVGSPGVGRMIMRNASK 132
+II L P + + G A+ G A+ V+ + F GS VG+ + +
Sbjct: 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQE 261
Query: 133 TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 192
LELGG +A I +D D+ V A+ AA+ ++GQ C A R ++H I+ V+
Sbjct: 262 RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321
Query: 193 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGA 252
++ K + G P G L + V +A +G ++ +G
Sbjct: 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV----YGGKVMDR 377
Query: 253 VDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ 312
Y PT++ + H + E F PI+ + KF +EEV N+ + GL ++F+
Sbjct: 378 PGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437
Query: 313 HRA-REIAAQ-IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 361
R R + + CG+ +N S FGG K +G GR +G + +
Sbjct: 438 GRIFRWLGPKGSDCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDAWK 487
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 156/356 (43%), Gaps = 24/356 (6%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 88 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 137
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 286 YVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKR 345
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 258 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 316
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 317 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 371
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 24/356 (6%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ PLG I WN+P ++ V GN ++ K +E+A G F I A
Sbjct: 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEA---- 226
Query: 88 GAPENLVDVITGFAE-TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP-------V 137
G P +V+ + G E G LV + I F GS VG I A + L P
Sbjct: 227 GFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRA 285
Query: 138 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 197
+E GGKDA IV + D A+ V +A GQ + A R + + Y + +V K
Sbjct: 286 YVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKR 345
Query: 198 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 346 AERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYF 398
Query: 258 -PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 316
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 317 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 371
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 12/327 (3%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
+P+GVVG I +N+P A+ GN ++K SE + + A G
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKA----G 195
Query: 89 APENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 146
P+ + +V+ G + ++ + I FVGS VG + + S+ L V G K+
Sbjct: 196 LPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNH 255
Query: 147 FIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP 206
IV +D ++ V AA S+G+ C V I F++++ + V + G
Sbjct: 256 TIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNG 315
Query: 207 LAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF-PPTVIVNV 265
L +G + ++ ++ + + L++GA ++ G ++S+ D YF PT+ NV
Sbjct: 316 LDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSD---DGYFVGPTIFDNV 371
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
M + ++E F P++ +++ +E +++AN S + G +F+ + + R I G
Sbjct: 372 TTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAG 431
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFG 352
+ IN M PF G K S FG
Sbjct: 432 MLGINLGVPAPMA-FFPFSGWKSSFFG 457
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 36/347 (10%)
Query: 28 FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV 87
+ P GV I WN+P AA+ +GN +V K S S G + + A
Sbjct: 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREA---- 719
Query: 88 GAPENLVDVITGFAET-GEALVSSVD--KIIFVGSPGVGRMIMRNASK------TLTPVT 138
G PE + + G G+ LV D I F GS G I+ A+K + +
Sbjct: 720 GLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKII 779
Query: 139 LELGGKDAFIVCDDVD----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 194
E+GGK+A I+ DD D VPHV + +A GQ C+ R V +Y F+ ++
Sbjct: 780 SEMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERL 835
Query: 195 AKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV 253
+ K+ GP MGA+ + ++ + AEI R GH L E V
Sbjct: 836 VSMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPV 885
Query: 254 ---DQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 309
+ YF P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L +FS
Sbjct: 886 PAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFS 945
Query: 310 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 356
S + + + G IN + + + PFGG + SG G AG
Sbjct: 946 RSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 153/356 (42%), Gaps = 11/356 (3%)
Query: 29 HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG 88
P+G+ I +N+P A+ GN ++K SE R+ + + A G
Sbjct: 161 QPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDP---SVPIRLAELXIEA-G 216
Query: 89 APENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDA 146
P +++V+ G +A+++ D + FVGS + R + A+ G K+
Sbjct: 217 LPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNH 276
Query: 147 FIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKSVSAGP 205
I+ D D+ A + A S+G+ C A + V + + ++ V+S+ GP
Sbjct: 277 XIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGP 336
Query: 206 PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNV 265
K D G + E +++++L++ +++GA+++ G L + + +V
Sbjct: 337 YTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396
Query: 266 NHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCG 325
+ + E FGP++ +++ EE + L YG G A+++ AR+ A++I G
Sbjct: 397 TPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFASRINIG 456
Query: 326 VAAINDFASNYMCQSLPFGGVKDSGFGRFA--GVEGLRACCLVKSVVEDRWWPYIK 379
+N FGG K S FG G + ++ K++ RW IK
Sbjct: 457 XVGVN-VPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS-RWPSGIK 510
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 149/337 (44%), Gaps = 30/337 (8%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAV---G 88
GV AI WN+P + AA+ +GN +V K +E RI + A+A + G
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTP-------RIAREAVALLHEAG 703
Query: 89 APENLVDVITGFAETGEALVSSVD--KIIFVGSPGVGRMIMRN-ASKT--LTPVTLELGG 143
P++ + ++TG G AL + D ++F GS V R I R A+K + P+ E GG
Sbjct: 704 IPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGG 763
Query: 144 KDAFIVCDDVDVP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVS 202
+A I D +P VA V +A +S+GQ C+ +V D+ + VA + +
Sbjct: 764 INAMI-ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELK 822
Query: 203 AGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEGAVDQYFPPTV 261
G P +G + +E ++L DA + AR F G EG F
Sbjct: 823 IGDPSDVATHVGPVIDVEAKQRL-----DAHIARMKTEARLHFAGPAPEGC----FVAPH 873
Query: 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFSGSQHRAREIA 319
I + +L EE FGPI+ ++++ + E V++ + YGL V S I
Sbjct: 874 IFELTEAGQLT-EEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII 932
Query: 320 AQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 356
++Q G +N + PFGG SG G AG
Sbjct: 933 DRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 158/345 (45%), Gaps = 25/345 (7%)
Query: 19 MIHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFR 78
+ A + P GVV +N+P H ++ A+ +GN +V K SE +
Sbjct: 128 LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLK 187
Query: 79 I-IQAALAAVGAPENLVDVITGFAETGEALVS--SVDKIIFVGSPGVGRMIMRN-ASKTL 134
IQA L P +++++ G ETG AL + +D + F GS G ++ +
Sbjct: 188 AWIQAGL-----PAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 135 TPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQV 194
+ LE GG + +V + D+ +++A S+GQ C A R V + + + +
Sbjct: 243 KILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDAL--L 300
Query: 195 AKIVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 248
A++V +VSA + G++D GA+ L +E L + KGA+ L +
Sbjct: 301 ARLV-AVSATLRV-GRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXT--QP 356
Query: 249 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVF 308
+GA P I++V+ + EE FGP++ +++++ ++ AN ++YGL +
Sbjct: 357 IDGAA--LLTPG-ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLL 413
Query: 309 SGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 353
S S+ R + + + G+ N + S PFGG+ SG R
Sbjct: 414 SDSRERFEQFLVESRAGIVNWNKQLTG-AASSAPFGGIGASGNHR 457
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 42/323 (13%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 110
A GN ++ K S+ A + +RI++ A G P N++ + T G+ + SS
Sbjct: 222 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPTFGDTVTSSE 277
Query: 111 -VDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 163
+ I F GS + + R + +T + E GGK+ V DV V +
Sbjct: 278 HLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTL 337
Query: 164 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-------LAGKYDMGAL 216
R+A + GQ C+ R YV + ++ ++ + + G P + D A
Sbjct: 338 RSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAF 397
Query: 217 C----LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLM 272
LEH+ +L ILA G +V Y P +I + + +M
Sbjct: 398 ARIKKWLEHARSSPSL---------SILAGGQCNE----SVGYYVEPCIIESKDPQEPIM 444
Query: 273 QEEAFGPIMPIMKFNTDE--EVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--CGVA 327
+EE FGP++ + + D+ E +KL + + YGL AVF+ + +E ++ G
Sbjct: 445 KEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNF 504
Query: 328 AINDFASNYMCQSLPFGGVKDSG 350
IND ++ + PFGG + SG
Sbjct: 505 YINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 110
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 111 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 163
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 164 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 217
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 218 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 269
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 270 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 324
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSG 350
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 110
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 111 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 163
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 164 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 217
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 218 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 269
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 270 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 324
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSG 350
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET-GEALVSS- 110
A GN ++ K S+ A + +RI++ A G P N++ + G+ + SS
Sbjct: 225 APALMGNVVLWKPSDTAMLASYAVYRILREA----GLPPNIIQFVPADGPLFGDTVTSSE 280
Query: 111 -VDKIIFVGSPGVGRMIMRNASK------TLTPVTLELGGKDAFIVCDDVDVPHVAQIAV 163
+ I F GS + + + ++ T + E GGK+ V DV V +
Sbjct: 281 HLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTL 340
Query: 164 RAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALC------ 217
R+A + GQ C+ R YV ++ ++ + + G P D G
Sbjct: 341 RSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAE---DFGTFFSAVIDA 397
Query: 218 --------LLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTM 269
LEH+ +L ILA G + +V + P ++ + +
Sbjct: 398 KSFARIKKWLEHARSSPSLT---------ILAGGK----CDDSVGYFVEPCIVESKDPQE 444
Query: 270 KLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQ--C 324
+M+EE FGP++ + + D +E ++L + + YGL AVFS + +E ++
Sbjct: 445 PIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAA 504
Query: 325 GVAAINDFASNYMCQSLPFGGVKDSG 350
G IND ++ + PFGG + SG
Sbjct: 505 GNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
PLGVV ++ P + L ++ +GN IV NA + RII A G
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 90 PENLVDVITGFAETG-EALVSSVDKIIFVGSPGVGRMIMRNASKTLTP-VTLELGGKDAF 147
P+ + +T G + L+ D + + + G +++ A + TP + + G AF
Sbjct: 168 PKGAISCMTVPTIQGTDQLMKHKDTAVILATG--GSAMVKAAYSSGTPAIGVGPGNGPAF 225
Query: 148 IVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 184
I ++P + + + +G CA + V R
Sbjct: 226 IE-RSANIPRAVKHILDSKTFDNGTICASEQSVVVER 261
>pdb|1O20|A Chain A, Crystal Structure Of Gamma-glutamyl Phosphate Reductase
(tm0293) From Thermotoga Maritima At 2.00 A Resolution
Length = 427
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
P+G +G I+ + P + +LA + SGN I+++ +A S I+ AL
Sbjct: 125 PIGPIG-IIYESRPNVTVETTILA-LKSGNTILLRGGSDALNSNKAIVSAIREALKETEI 182
Query: 90 PENLVDVITGFAETGEALVSSVDK-------IIFVGSPGVGRMIMRNASKTLTPVTLELG 142
PE+ V+ I T +LV + +I G G+ + NA+ PV LE G
Sbjct: 183 PESSVEFIEN---TDRSLVLEXIRLREYLSLVIPRGGYGLISFVRDNAT---VPV-LETG 235
Query: 143 GKDAFIVCDD-VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 191
+ I D+ D+ + + A Q G C AE+ VH I F+
Sbjct: 236 VGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFL 284
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 151 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 207
Query: 92 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 149
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 208 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 267
Query: 150 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 268 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 327
Query: 205 PPLAGKYDMGALCLLEHSEKL 225
P MG+L E E +
Sbjct: 328 NPRNDAVRMGSLVSREQYENV 348
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 92 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 149
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 150 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 205 PPLAGKYDMGALCLLEHSEKL 225
P MG+L E E +
Sbjct: 330 NPRNDAVRMGSLVSREQYENV 350
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 10/201 (4%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 92 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 149
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 150 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
C D D P + VR SGQ C R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 205 PPLAGKYDMGALCLLEHSEKL 225
P MG+L E E +
Sbjct: 330 NPRNDAVRMGSLVSREQYENV 350
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 78/207 (37%), Gaps = 22/207 (10%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 92 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGK------- 144
+ +I G + + S D + F GS + + P ++ G +
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAH------PAFVQRGARLNVQADS 263
Query: 145 -DAFIVCDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 198
++ I+C D D P + VR SGQ C R +V + + +
Sbjct: 264 LNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKL 323
Query: 199 KSVSAGPPLAGKYDMGALCLLEHSEKL 225
++ G P MG+L E E +
Sbjct: 324 AKITVGNPRNDAVRMGSLVSREQYENV 350
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 4/171 (2%)
Query: 30 PLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGA 89
PLGV+G I+ + P I L + SGN +++ A S ++I LA G
Sbjct: 137 PLGVIG-IIYESRPNVTIDAAALC-LKSGNATILRGGSEALESNTALAKLIGEGLAEAGL 194
Query: 90 PENLVDVITGFAETGEALVSSVDKIIFVGSPGVGR-MIMRNASKTLTPVTLELGGKDAFI 148
P++ V V+ + ++ + + V P G+ +I R ++ P+ L G
Sbjct: 195 PQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVY 254
Query: 149 VCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 199
V D V + A G C E V R I +S + ++ +
Sbjct: 255 VDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYR 304
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
pdb|3ZTT|A Chain A, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|B Chain B, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|C Chain C, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|D Chain D, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
Length = 303
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 126 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE--RFYVH 183
++ NA KT KD F V D VDV ++ GQN G E +++
Sbjct: 97 LVENAKKT--------ENKDYFAVSDGVDVIYL-----------EGQNEKGKEDPHAWLN 137
Query: 184 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 243
+ +F +AK +SA P + L E+++KL L ++ DK +I A
Sbjct: 138 LENGIIFAKNIAK---QLSAKDP--NNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEK 192
Query: 244 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 279
SEGA +YF V + ++ EE P
Sbjct: 193 KLIVTSEGAF-KYFSKAYGVPSAYIWEINTEEEGTP 227
>pdb|1V9P|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase
pdb|1V9P|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase
Length = 584
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 107
A F +G+V+K+ + A W Y R + ALA A L+DV+ TG
Sbjct: 280 ALPFEADGVVVKLDDLALWRELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 339
Query: 108 VSSVDKIIFVGSPGVGRMIMRNAS 131
V + +F+ V R+ + N S
Sbjct: 340 PVGVLEPVFIEGSEVSRVTLHNES 363
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 10/201 (4%)
Query: 32 GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPE 91
GV I ++N+P ++ A+ SG +++K + +W R++ + A P
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAW---LTQRMVADVVDAGILPP 209
Query: 92 NLVDVITGFAETGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIV 149
+ +I G + + S D + F GS + + + + + +E ++ I+
Sbjct: 210 GALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVEADSLNSAIL 269
Query: 150 CDDV--DVPH---VAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAG 204
C D D P + VR SGQ R +V + + + ++ G
Sbjct: 270 CADATPDTPAFDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVG 329
Query: 205 PPLAGKYDMGALCLLEHSEKL 225
P MG+L E E +
Sbjct: 330 NPRNDAVRMGSLVSREQYENV 350
>pdb|3K1J|A Chain A, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
pdb|3K1J|B Chain B, Crystal Structure Of Lon Protease From Thermococcus
Onnurineus Na1
Length = 604
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 90 PENLVDVITGFAETGEALVSSVDK---IIFVGSPGVGRMIMRNASKTLTPV-TLE 140
PE L+D + G E + ++ ++ ++ +G PG G+ ++ A L P TLE
Sbjct: 36 PEKLIDQVIGQEHAVEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLE 90
>pdb|3A8I|E Chain E, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8I|F Chain F, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8J|E Chain E, Crystal Structure Of Et-Ehred Complex
pdb|3A8J|F Chain F, Crystal Structure Of Et-Ehred Complex
pdb|3A8K|E Chain E, Crystal Structure Of Etd97n-Ehred Complex
pdb|3A8K|F Chain F, Crystal Structure Of Etd97n-Ehred Complex
pdb|3AB9|A Chain A, Crystal Structure Of Lipoylated E. Coli H-Protein (Reduced
Form)
Length = 129
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 153 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 43 VDLPEVG------ATVSAGDDCAVAESVXAASDIYAPVSGEIVAVNDALSDSPEL 91
>pdb|3A7A|B Chain B, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7A|D Chain D, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7L|A Chain A, Crystal Structure Of E. Coli Apoh-Protein
Length = 128
Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 153 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 207
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 42 VDLPEVG------ATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPEL 90
>pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
Length = 667
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 53 AAVFSGNGIVIKVSENASWSGCFYF-RIIQAALA----AVGAPENLVDVITGFAETGEAL 107
A F +G+V+K+ + W Y R + ALA A L+DV+ TG
Sbjct: 277 ALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKETRLLDVVFQVGRTGRVT 336
Query: 108 VSSVDKIIFVGSPGVGRMIMRNAS 131
V + +F+ V R+ + N S
Sbjct: 337 PVGVLEPVFIEGSEVSRVTLHNES 360
>pdb|3TTS|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTY|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
Length = 675
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 185 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD--KGAEILAR 242
+I AL +IV G L G Y G LC + H+E + L D KG +L R
Sbjct: 516 EIDALLPGHQNEIVLRQDWGG-LRGSYSCGILCDVIHAETAEVLAEYGADYYKGTPVLTR 574
Query: 243 GSFGH 247
FG+
Sbjct: 575 NKFGN 579
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,891,417
Number of Sequences: 62578
Number of extensions: 530377
Number of successful extensions: 1618
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1234
Number of HSP's gapped (non-prelim): 107
length of query: 437
length of database: 14,973,337
effective HSP length: 102
effective length of query: 335
effective length of database: 8,590,381
effective search space: 2877777635
effective search space used: 2877777635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)