Query 013765
Match_columns 437
No_of_seqs 269 out of 2006
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:41:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.3E-89 4.3E-94 716.5 42.5 347 21-373 133-483 (490)
2 3sza_A Aldehyde dehydrogenase, 100.0 8.4E-88 2.9E-92 700.5 39.7 354 20-393 110-464 (469)
3 3ed6_A Betaine aldehyde dehydr 100.0 1.3E-86 4.4E-91 698.9 41.4 347 21-373 161-510 (520)
4 3iwj_A Putative aminoaldehyde 100.0 2.7E-86 9.3E-91 695.0 43.0 345 21-373 142-489 (503)
5 3ros_A NAD-dependent aldehyde 100.0 1.7E-86 5.9E-91 692.7 39.4 343 21-374 114-459 (484)
6 3pqa_A Lactaldehyde dehydrogen 100.0 1.7E-86 5.7E-91 693.2 39.2 342 21-374 121-465 (486)
7 3ifg_A Succinate-semialdehyde 100.0 1.9E-86 6.7E-91 692.7 38.0 341 21-371 139-482 (484)
8 3rh9_A Succinate-semialdehyde 100.0 3.3E-86 1.1E-90 693.7 39.6 345 21-374 137-485 (506)
9 4e4g_A Methylmalonate-semialde 100.0 4.2E-86 1.4E-90 695.2 39.5 346 22-372 154-504 (521)
10 3k2w_A Betaine-aldehyde dehydr 100.0 3.8E-86 1.3E-90 693.0 39.0 347 21-373 139-488 (497)
11 3ek1_A Aldehyde dehydrogenase; 100.0 2.4E-86 8.2E-91 694.4 37.1 341 21-373 159-502 (504)
12 2j6l_A Aldehyde dehydrogenase 100.0 6.3E-86 2.1E-90 691.8 39.6 345 23-372 150-498 (500)
13 3r31_A BADH, betaine aldehyde 100.0 2.4E-86 8.2E-91 696.4 36.3 344 24-374 144-489 (517)
14 3u4j_A NAD-dependent aldehyde 100.0 8.6E-86 2.9E-90 693.8 39.3 344 21-373 152-498 (528)
15 3prl_A NADP-dependent glyceral 100.0 1.1E-85 3.7E-90 690.0 39.2 337 22-373 144-483 (505)
16 3b4w_A Aldehyde dehydrogenase; 100.0 1.2E-85 4.1E-90 688.5 39.3 342 22-372 138-481 (495)
17 2o2p_A Formyltetrahydrofolate 100.0 2.7E-85 9.2E-90 688.4 40.6 340 23-372 171-516 (517)
18 1bxs_A Aldehyde dehydrogenase; 100.0 3E-85 1E-89 686.1 40.8 342 21-372 150-495 (501)
19 4f3x_A Putative aldehyde dehyd 100.0 1E-85 3.4E-90 689.2 37.1 341 21-372 152-496 (498)
20 1o04_A Aldehyde dehydrogenase, 100.0 1.8E-85 6.2E-90 687.6 39.0 341 22-372 150-494 (500)
21 1a4s_A ALDH, betaine aldehyde 100.0 2.8E-85 9.5E-90 687.0 39.7 346 22-373 147-496 (503)
22 3jz4_A Succinate-semialdehyde 100.0 3.9E-85 1.3E-89 683.4 40.5 342 21-372 136-480 (481)
23 2imp_A Lactaldehyde dehydrogen 100.0 5.3E-85 1.8E-89 682.0 40.4 341 22-372 134-478 (479)
24 3i44_A Aldehyde dehydrogenase; 100.0 1.2E-84 4E-89 681.0 42.0 340 22-370 152-495 (497)
25 2d4e_A 5-carboxymethyl-2-hydro 100.0 9.6E-85 3.3E-89 684.8 41.4 346 21-373 153-505 (515)
26 1wnd_A Putative betaine aldehy 100.0 7.7E-85 2.6E-89 682.1 40.2 339 22-372 151-494 (495)
27 3qan_A 1-pyrroline-5-carboxyla 100.0 4.9E-85 1.7E-89 689.5 38.9 344 21-373 163-516 (538)
28 4h7n_A Aldehyde dehydrogenase; 100.0 3.4E-85 1.1E-89 682.7 37.1 354 22-388 118-472 (474)
29 3etf_A Putative succinate-semi 100.0 1.1E-84 3.8E-89 677.1 40.7 343 21-373 117-461 (462)
30 3r64_A NAD dependent benzaldeh 100.0 1E-84 3.5E-89 683.8 40.7 342 21-374 139-486 (508)
31 2ve5_A BADH, betaine aldehyde 100.0 2.2E-84 7.5E-89 679.4 41.5 347 21-373 133-483 (490)
32 1uxt_A Glyceraldehyde-3-phosph 100.0 1.8E-84 6.3E-89 680.5 38.4 337 23-373 150-492 (501)
33 2w8n_A Succinate-semialdehyde 100.0 8.6E-85 2.9E-89 681.1 34.1 341 21-372 137-485 (487)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.7E-83 5.6E-88 675.9 40.9 342 21-372 164-515 (516)
35 4dng_A Uncharacterized aldehyd 100.0 5.2E-84 1.8E-88 675.8 35.9 341 21-373 134-478 (485)
36 1t90_A MMSDH, probable methylm 100.0 1.9E-83 6.5E-88 671.2 38.7 342 22-372 133-479 (486)
37 1euh_A NADP dependent non phos 100.0 2.3E-83 8E-88 669.0 38.8 334 23-372 135-473 (475)
38 3lns_A Benzaldehyde dehydrogen 100.0 3E-83 1E-87 665.2 39.1 335 20-372 120-456 (457)
39 3ty7_A Putative aldehyde dehyd 100.0 1.7E-83 5.8E-88 670.7 35.4 342 22-371 131-475 (478)
40 4e3x_A Delta-1-pyrroline-5-car 100.0 1E-81 3.4E-86 666.1 38.6 353 23-391 193-562 (563)
41 2y53_A Aldehyde dehydrogenase 100.0 1.3E-79 4.4E-84 649.1 34.1 346 23-374 143-520 (534)
42 3ju8_A Succinylglutamic semial 100.0 2.6E-78 8.8E-83 633.0 42.6 336 22-373 131-471 (490)
43 4f9i_A Proline dehydrogenase/d 100.0 8.8E-79 3E-83 676.9 39.7 344 21-373 657-1010(1026)
44 3haz_A Proline dehydrogenase; 100.0 1.8E-77 6.1E-82 665.1 39.1 341 21-374 640-988 (1001)
45 3v4c_A Aldehyde dehydrogenase 100.0 2.9E-77 1E-81 630.3 30.8 333 22-370 161-515 (528)
46 1ez0_A ALDH, aldehyde dehydrog 100.0 1.9E-76 6.5E-81 621.7 32.7 330 23-370 129-480 (510)
47 3k9d_A LMO1179 protein, aldehy 100.0 5.1E-72 1.8E-76 581.9 25.7 327 21-372 99-448 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 1.7E-71 5.8E-76 577.5 24.1 307 22-373 118-440 (468)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 5.8E-70 2E-74 565.3 25.7 298 22-373 132-435 (463)
50 4ghk_A Gamma-glutamyl phosphat 100.0 2.8E-69 9.6E-74 558.2 25.9 301 21-373 128-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.1E-68 3.9E-73 551.1 25.7 298 22-373 117-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 1E-65 3.6E-70 532.8 23.6 321 22-372 95-448 (452)
53 4gic_A HDH, histidinol dehydro 95.9 1.6 5.5E-05 43.5 22.6 256 21-370 120-400 (423)
54 1kae_A HDH, histidinol dehydro 94.3 4.8 0.00016 40.2 25.3 253 22-370 115-393 (434)
55 2fiu_A Conserved hypothetical 79.2 4.8 0.00016 31.7 6.5 59 218-300 16-75 (99)
56 3lo3_A Uncharacterized conserv 59.1 23 0.00079 27.3 6.3 60 218-301 15-75 (94)
57 1b93_A Protein (methylglyoxal 56.3 9.8 0.00034 32.5 3.9 115 29-171 8-135 (152)
58 1vmd_A MGS, methylglyoxal synt 50.3 8.5 0.00029 33.8 2.6 119 26-171 21-151 (178)
59 2yvq_A Carbamoyl-phosphate syn 50.3 11 0.00039 31.6 3.4 58 84-141 63-132 (143)
60 3hhl_A RPA0582; alpha-beta-bar 47.2 30 0.001 29.1 5.5 63 216-299 45-108 (143)
61 2xw6_A MGS, methylglyoxal synt 38.4 8.3 0.00028 32.3 0.6 55 87-141 48-112 (134)
62 1gvf_A Tagatose-bisphosphate a 38.3 1.3E+02 0.0046 28.1 9.1 95 48-143 32-137 (286)
63 3q94_A Fructose-bisphosphate a 28.2 1.6E+02 0.0055 27.6 7.8 95 47-142 34-142 (288)
64 2ec4_A FAS-associated factor 1 27.3 26 0.00088 30.5 1.9 49 274-322 25-77 (178)
65 1s7i_A Hypothetical protein PA 25.5 2.5E+02 0.0086 22.5 7.6 28 274-302 81-108 (124)
66 1hqk_A 6,7-dimethyl-8-ribityll 24.9 2.1E+02 0.0073 24.1 7.2 96 66-162 20-128 (154)
67 3u3x_A Oxidoreductase; structu 24.5 2.5E+02 0.0086 26.6 8.8 87 104-206 80-170 (361)
68 3nq4_A 6,7-dimethyl-8-ribityll 24.1 2.6E+02 0.0088 23.7 7.6 97 66-162 20-129 (156)
69 2v9v_A Selenocysteine-specific 23.6 91 0.0031 25.0 4.6 80 161-243 36-124 (135)
70 2isw_A Putative fructose-1,6-b 23.6 2.4E+02 0.008 27.0 8.1 95 48-143 32-138 (323)
71 3n9r_A Fructose-bisphosphate a 23.3 2.6E+02 0.0088 26.5 8.2 94 48-142 31-136 (307)
72 2pjk_A 178AA long hypothetical 23.1 51 0.0018 28.5 3.1 41 83-123 48-94 (178)
73 2wk1_A NOVP; transferase, O-me 22.9 1.6E+02 0.0053 27.5 6.6 69 78-154 175-246 (282)
74 1c2y_A Protein (lumazine synth 22.0 3E+02 0.01 23.3 7.6 96 66-162 21-128 (156)
75 4djd_C C/Fe-SP, corrinoid/iron 21.8 4.6E+02 0.016 26.2 10.0 142 168-331 15-184 (446)
76 3kbq_A Protein TA0487; structu 20.9 1E+02 0.0034 26.6 4.5 41 82-122 30-74 (172)
77 1rvg_A Fructose-1,6-bisphospha 20.1 3.3E+02 0.011 25.7 8.2 93 48-142 31-134 (305)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.3e-89 Score=716.52 Aligned_cols=347 Identities=31% Similarity=0.522 Sum_probs=328.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
....+++|+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. +||+|+|++|+|+|+
T Consensus 133 ~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~----eaGlP~gv~~vv~g~ 208 (490)
T 2wme_A 133 TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGVPDGVFNVLTGS 208 (490)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSC
T ss_pred CcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHH----HhCCCCCcEEEEeCC
Confidence 4567899999999999999999999999999999999999999999999999999888764 689999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHH-HhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMR-NASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~-~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
+ +.++.|++ +||+|+||||+.+|+.|++ .+++++||++||||||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 209 g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a 288 (490)
T 2wme_A 209 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN 288 (490)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTC
T ss_pred hHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCC
Confidence 6 78999988 8999999999999999876 557789999999999999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
++|+|||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||..........|+|
T Consensus 289 ~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~ 368 (490)
T 2wme_A 289 GTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368 (490)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTC
T ss_pred ceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998654433457999
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 369 ~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~- 447 (490)
T 2wme_A 369 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES- 447 (490)
T ss_dssp BCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-
T ss_pred cCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|+||+|++||++||++||+.|+|+++.
T Consensus 448 -~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 448 -PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp -CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred -CCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 346899999999999999999999999999999875
No 2
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=8.4e-88 Score=700.48 Aligned_cols=354 Identities=30% Similarity=0.494 Sum_probs=330.0
Q ss_pred ccccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 20 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 20 ~~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
.....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+|
T Consensus 110 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g 184 (469)
T 3sza_A 110 QQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ----Y-LDKDLYPVING 184 (469)
T ss_dssp TTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH----H-SCTTTSCBCCC
T ss_pred CCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----h-CCcceEEEEEC
Confidence 345788999999999999999999999999999999999999999999999999999988764 4 99999999999
Q ss_pred ChhhHHHHHh-ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 100 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 100 ~~~~~~~L~~-~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+.+.+|+. ++|+|+||||+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 185 ~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 264 (469)
T 3sza_A 185 GVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPD 264 (469)
T ss_dssp SHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCC
T ss_pred CHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 8777778888 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++ .|+|.++++++||++++++++++++++ +|+++++||.. +..|+|++
T Consensus 265 rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~-----~~~g~~~~ 333 (469)
T 3sza_A 265 YILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTG-----DAATRYIA 333 (469)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCE-----ETTTTEEC
T ss_pred EEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCcc-----CCCCceeC
Confidence 99999999999999999999998 599999999999999999999999998 58999999973 34689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+...
T Consensus 334 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~ 413 (469)
T 3sza_A 334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITL 413 (469)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSC
T ss_pred CeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998665555
Q ss_pred CCCCccccCCCCCCCcccHHHHHhcceeeEEEEcccccccccCCCCCCCCCCcch
Q 013765 339 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVAEN 393 (437)
Q Consensus 339 ~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~~~ 393 (437)
+.+||||+|+||+|+++|.+||++||+.|+|+.++++. ....+++|||+.+
T Consensus 414 ~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~----~~~~~~~yppy~~ 464 (469)
T 3sza_A 414 HSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMN----DEGLKVRYPPSPA 464 (469)
T ss_dssp TTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSC----CGGGGGGSSSCCC
T ss_pred CCCCcCCccccccCccchHHHHHHhhCeeEEEECCccc----ccccccccCCCCc
Confidence 67999999999999999999999999999999987641 1123578888643
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.3e-86 Score=698.94 Aligned_cols=347 Identities=33% Similarity=0.557 Sum_probs=328.5
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
....+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 161 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~----eaGlP~gvvnvv~g~ 236 (520)
T 3ed6_A 161 DTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME----EVGFPKGTINLILGA 236 (520)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHH----HHCCCTTSEEECCSC
T ss_pred CCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHH----HhCCCCCeEEEEeCC
Confidence 4567899999999999999999999999999999999999999999999999998888764 689999999999996
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 237 ~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~ 316 (520)
T 3ed6_A 237 GSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAG 316 (520)
T ss_dssp CTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCC
T ss_pred ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccC
Confidence 5 78999987 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..........|+|+
T Consensus 317 ~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~ 396 (520)
T 3ed6_A 317 SRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFF 396 (520)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCC
T ss_pred ceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999984321112468999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+
T Consensus 397 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-- 474 (520)
T 3ed6_A 397 EPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-- 474 (520)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC--
T ss_pred CCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 475 ~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~ 510 (520)
T 3ed6_A 475 FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT 510 (520)
T ss_dssp CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence 356899999999999999999999999999998764
No 4
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2.7e-86 Score=695.03 Aligned_cols=345 Identities=34% Similarity=0.561 Sum_probs=327.4
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
....+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 142 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~ 217 (503)
T 3iwj_A 142 TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEIC----KEVGLPPGVLNILTGL 217 (503)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCSC
T ss_pred CccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHH----HHhCcCcCeEEEEeCC
Confidence 457899999999999999999999999999999999999999999999999999888775 4689999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 218 ~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 297 (503)
T 3iwj_A 218 GPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSAT 297 (503)
T ss_dssp HHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCE
T ss_pred cHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccC
Confidence 6 78889987 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.+++++++++|+++++||.... ....|+|+
T Consensus 298 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~ 375 (503)
T 3iwj_A 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFI 375 (503)
T ss_dssp EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCC
T ss_pred CeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCcee
Confidence 9999999999999999999999999999999999999999999999999999999999999999997421 11479999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 376 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-- 453 (503)
T 3iwj_A 376 EPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC-- 453 (503)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC--
T ss_pred CCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987433
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|.||+|+++|++||++||+.|+|+...
T Consensus 454 ~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~~ 489 (503)
T 3iwj_A 454 FTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYI 489 (503)
T ss_dssp CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEeC
Confidence 456999999999999999999999999999998864
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.7e-86 Score=692.74 Aligned_cols=343 Identities=29% Similarity=0.473 Sum_probs=326.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 114 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~ 189 (484)
T 3ros_A 114 LGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIK----RAGAPEGSLINLYPS 189 (484)
T ss_dssp TSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHH----HHTCCTTSEEEECCC
T ss_pred CceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCcCcCeEEEEeCC
Confidence 4578999999999999999999999999999999999999999999999999998887764 679999999999998
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.++ |++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 190 ~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 268 (484)
T 3ros_A 190 YDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSS 268 (484)
T ss_dssp HHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSC
T ss_pred hHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 4566 887 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++++++++++++|+++++||... +..|+|+
T Consensus 269 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~ 344 (484)
T 3ros_A 269 KRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEI----DSKGAFF 344 (484)
T ss_dssp CEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCC----CCSSCCC
T ss_pred ceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcC----CCCCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999999742 3579999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 345 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-- 422 (484)
T 3ros_A 345 RPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT-- 422 (484)
T ss_dssp CCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCC--
T ss_pred CCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996433
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEccc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
.+.+||||+|+||+|+++|++||++||+.|+|+.+..
T Consensus 423 ~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 423 SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp CTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred CCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 4569999999999999999999999999999998753
No 6
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.7e-86 Score=693.22 Aligned_cols=342 Identities=30% Similarity=0.512 Sum_probs=327.8
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.++++++|+|+|++++|+|+
T Consensus 121 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~ 200 (486)
T 3pqa_A 121 DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGA 200 (486)
T ss_dssp TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSC
T ss_pred CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 201 ~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 278 (486)
T 3pqa_A 201 GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISV 278 (486)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE
T ss_pred chHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCC
Confidence 6 56899987 8999999999999999999988 99999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++|||+++++++++++++++++++|+++++||. ..|+|+
T Consensus 279 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g~~~ 351 (486)
T 3pqa_A 279 GMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RDKALF 351 (486)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEE
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCcEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 258999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||++||||+|.++++++++++++|+|+||++..+..
T Consensus 352 ~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~ 429 (486)
T 3pqa_A 352 YPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQ 429 (486)
T ss_dssp CCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCC
T ss_pred ccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCC
Confidence 99999 9999999999999999999999999 999999999999999999999999999999999999999999866433
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEccc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
..+||||+|+||+|++||++||++||+.|+|+.+..
T Consensus 430 -~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 430 -DNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp -TTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred -CCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 369999999999999999999999999999988754
No 7
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.9e-86 Score=692.74 Aligned_cols=341 Identities=32% Similarity=0.565 Sum_probs=325.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 139 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gv~~vv~g~ 214 (484)
T 3ifg_A 139 NKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLA----ERAGVPKGVLSVVIGD 214 (484)
T ss_dssp TEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCBC
T ss_pred CceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH----HHhCCCcccEEEEeCC
Confidence 456789999999999999999999999999999999999999999999999999888775 4689999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 215 ~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 294 (484)
T 3ifg_A 215 PKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCT 294 (484)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC
T ss_pred CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCC
Confidence 6 78999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... ...|+|+
T Consensus 295 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~ 370 (484)
T 3ifg_A 295 NRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFF 370 (484)
T ss_dssp CEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCB
T ss_pred CeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCceE
Confidence 999999999999999999999999999999999999999999999999999999999999999999742 2368999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... .
T Consensus 371 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~--~ 448 (484)
T 3ifg_A 371 EPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI--S 448 (484)
T ss_dssp CCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC--C
T ss_pred cCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998643 2
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEE
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~ 371 (437)
.+.+||||+|+||+|+++|++||++||+.|+|+.
T Consensus 449 ~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 449 NEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp CSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred CCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence 4569999999999999999999999999999875
No 8
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=3.3e-86 Score=693.66 Aligned_cols=345 Identities=32% Similarity=0.548 Sum_probs=326.7
Q ss_pred cccceEEE-eeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 21 HKKAKVEF-HPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 21 ~~~~~~~~-~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
+...++++ +|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|
T Consensus 137 ~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g 212 (506)
T 3rh9_A 137 KDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMD----KLDLPDGMVNLVMG 212 (506)
T ss_dssp GGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHT----TTTCCTTSEEECCS
T ss_pred CceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHH----HhCcChhhEEEEeC
Confidence 45678888 99999999999999999999999999999999999999999999998888764 68999999999999
Q ss_pred Ch-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 100 FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 100 ~~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
++ +.+++|++ +||+|+||||+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 213 ~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a 292 (506)
T 3rh9_A 213 KASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC 292 (506)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSS
T ss_pred CChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCccc
Confidence 76 78899998 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||...+ ...|+|
T Consensus 293 ~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~ 369 (506)
T 3rh9_A 293 ANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLF 369 (506)
T ss_dssp CCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSC
T ss_pred CcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999997421 127899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+.
T Consensus 370 ~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~ 449 (506)
T 3rh9_A 370 FPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPT 449 (506)
T ss_dssp CCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCC
T ss_pred ECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEccc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
+.+||||+|.||+|+++|++||++||+.|+|+.+..
T Consensus 450 --~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 450 --PEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp --TTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred --CCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 458999999999999999999999999999988753
No 9
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-86 Score=695.20 Aligned_cols=346 Identities=21% Similarity=0.369 Sum_probs=327.5
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.
T Consensus 154 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~----~eaGlP~gvv~vv~g~~ 229 (521)
T 4e4g_A 154 IDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELM----IEAGLPAGILNVVNGDK 229 (521)
T ss_dssp EEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHH----HHTTCCTTSEEECCCCH
T ss_pred cceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCcCeEEEEeCCh
Confidence 45789999999999999999999999999999999999999999999999999888776 46899999999999988
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccE
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 179 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 179 (437)
+.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|
T Consensus 230 ~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~r 309 (521)
T 4e4g_A 230 GAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISV 309 (521)
T ss_dssp HHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEE
T ss_pred HHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeE
Confidence 88889987 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecc-cHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 180 FYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 180 v~V~~~-v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
+|||++ ++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||.....+.+..|+|++
T Consensus 310 vlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 389 (521)
T 4e4g_A 310 AVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIG 389 (521)
T ss_dssp EEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCC
T ss_pred EEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEEC
Confidence 999999 9999999999999999999999999999999999999999999999999999999999743222235799999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... ..
T Consensus 390 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~ 468 (521)
T 4e4g_A 390 GCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPV-PL 468 (521)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCC-CC
T ss_pred CEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997533 23
Q ss_pred CCCCccccCCCCCC--CcccHHHHHhcceeeEEEEc
Q 013765 339 QSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 339 ~~~PfGG~~~SG~G--~~~G~~~l~~ft~~k~v~~~ 372 (437)
+.+||||+|.||+| ++||++||++||+.|+|+.+
T Consensus 469 ~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 469 AYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp TTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 56899999999999 79999999999999999875
No 10
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.8e-86 Score=692.96 Aligned_cols=347 Identities=29% Similarity=0.500 Sum_probs=325.5
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 139 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll----~~aGlP~gvv~vv~g~ 214 (497)
T 3k2w_A 139 DEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIA----KEAGLPDGVLNVINGT 214 (497)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHH----HHTTCCTTSEEECCSC
T ss_pred CcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCC
Confidence 456789999999999999999999999999999999999999999999999999888875 4789999999999996
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 215 ~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 294 (497)
T 3k2w_A 215 GSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCV 294 (497)
T ss_dssp TTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSE
T ss_pred chHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCC
Confidence 5 78999988 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.+++++++++|+++++||..........|+|+
T Consensus 295 ~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 374 (497)
T 3k2w_A 295 ERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY 374 (497)
T ss_dssp EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCC
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999973111111368999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+.
T Consensus 375 ~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~- 453 (497)
T 3k2w_A 375 EPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ- 453 (497)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-
T ss_pred CCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986653
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 454 -~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 454 -HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp -TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred -CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 56899999999999999999999999999998754
No 11
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.4e-86 Score=694.43 Aligned_cols=341 Identities=30% Similarity=0.523 Sum_probs=325.6
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 159 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~----~eaGlP~gv~~vv~g~ 234 (504)
T 3ek1_A 159 GQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLA----EKAGIPAGVLQIVTGK 234 (504)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTTEEECCSC
T ss_pred cccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH----HHhCCCcccEEEEeCC
Confidence 456789999999999999999999999999999999999999999999999998888765 5789999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 235 ~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~ 314 (504)
T 3ek1_A 235 AREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCA 314 (504)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE
T ss_pred CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 6 78999988 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||.. ..|+|+
T Consensus 315 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~ 388 (504)
T 3ek1_A 315 NRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFF 388 (504)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEE
T ss_pred CEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999973 368999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 389 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-- 466 (504)
T 3ek1_A 389 EPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS-- 466 (504)
T ss_dssp CCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCC--
T ss_pred CCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987532
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 467 ~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 467 NEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp CSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 456899999999999999999999999999998753
No 12
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=6.3e-86 Score=691.81 Aligned_cols=345 Identities=25% Similarity=0.398 Sum_probs=329.0
Q ss_pred cceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCChh
Q 013765 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 102 (437)
Q Consensus 23 ~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~ 102 (437)
..+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+.+
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~ 229 (500)
T 2j6l_A 150 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGAD 229 (500)
T ss_dssp EEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHH
T ss_pred eeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999667
Q ss_pred hHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccEE
Q 013765 103 TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 180 (437)
Q Consensus 103 ~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v 180 (437)
.+++|++ ++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus 230 ~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv 309 (500)
T 2j6l_A 230 IGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 309 (500)
T ss_dssp HHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEE
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEE
Confidence 8999987 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccccce
Q 013765 181 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 260 (437)
Q Consensus 181 ~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Pt 260 (437)
|||++++|+|+++|+++++++++|+|.++++++|||+++++++++++++++++++|+++++||... +..|+|++||
T Consensus 310 lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PT 385 (500)
T 2j6l_A 310 FIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPT 385 (500)
T ss_dssp EEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCE
T ss_pred EEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCE
Confidence 999999999999999999999999999999999999999999999999999999999999999742 2368999999
Q ss_pred eeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHH--HHhccceEEECCCcccCCC
Q 013765 261 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIA--AQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 261 vl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~--~~l~~G~v~IN~~~~~~~~ 338 (437)
|+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ +++++|+|+||++... ..
T Consensus 386 vl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~-~~ 464 (500)
T 2j6l_A 386 IVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AE 464 (500)
T ss_dssp EEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTC-CC
T ss_pred EEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCcc-CC
Confidence 99999999999999999999999999999999999999999999999999999999999 7799999999986543 23
Q ss_pred CCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 339 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 339 ~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
..+||||+|.||+|++||.+|+++|++.|+|+.+
T Consensus 465 ~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 465 IGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp TTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred CCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 4689999999999999999999999999999764
No 13
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.4e-86 Score=696.41 Aligned_cols=344 Identities=31% Similarity=0.494 Sum_probs=326.3
Q ss_pred ceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCChhh
Q 013765 24 AKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAET 103 (437)
Q Consensus 24 ~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~~ 103 (437)
.+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.+.
T Consensus 144 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~----eaGlP~gvv~vv~g~~~~ 219 (517)
T 3r31_A 144 AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILI----EAGLPKGLFNVIQGDRDT 219 (517)
T ss_dssp EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHH----HTTCCTTSEEECCCCTTH
T ss_pred ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHH----HhCcCcccEEEEECCHHH
Confidence 8899999999999999999999999999999999999999999999999998887764 689999999999996688
Q ss_pred HHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccEEE
Q 013765 104 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 181 (437)
Q Consensus 104 ~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~ 181 (437)
+++|++ +||+|+||||+.+|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||
T Consensus 220 g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvl 299 (517)
T 3r31_A 220 GPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVF 299 (517)
T ss_dssp HHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEE
T ss_pred HHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEE
Confidence 999998 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccccee
Q 013765 182 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 261 (437)
Q Consensus 182 V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptv 261 (437)
||++++|+|+++|+++++++++|+|.++++++||+++++++++++++|++++++|+++++|| .........|+|++|||
T Consensus 300 V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTv 378 (517)
T 3r31_A 300 VQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTV 378 (517)
T ss_dssp EEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEE
T ss_pred EeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 31111124699999999
Q ss_pred eecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCCCCC
Q 013765 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 341 (437)
Q Consensus 262 l~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~ 341 (437)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+
T Consensus 379 l~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~~~ 456 (517)
T 3r31_A 379 FADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC--PVEI 456 (517)
T ss_dssp EEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC--CTTS
T ss_pred EecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC--CCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997543 4569
Q ss_pred CccccCCCCCCCcccHHHHHhcceeeEEEEccc
Q 013765 342 PFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 342 PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
||||+|.||+|+++|++||++||+.|+|+.+..
T Consensus 457 PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 457 PFGGSKQSGFGRENSAAALEHYSELKTVYVSTG 489 (517)
T ss_dssp CBCCEETTEECCBSTGGGGGGSEEEEEEEECCC
T ss_pred CcCCcCcCCCCcCchHHHHHHhhceEEEEEcCC
Confidence 999999999999999999999999999988653
No 14
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.6e-86 Score=693.81 Aligned_cols=344 Identities=32% Similarity=0.507 Sum_probs=327.3
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 152 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~ 227 (528)
T 3u4j_A 152 DRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAR----EAGIPDGVFNVVTGY 227 (528)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HHTCCTTSEEECCCS
T ss_pred CceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHH----HhCCCCCeEEEEeCC
Confidence 4568899999999999999999999999999999999999999999999999999888764 679999999999995
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 228 ~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 307 (528)
T 3u4j_A 228 GDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISG 307 (528)
T ss_dssp STTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE
T ss_pred cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCC
Confidence 5 78999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++.+++++++++|+++++||.... ...|+|+
T Consensus 308 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~ 384 (528)
T 3u4j_A 308 SRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG---REAGLYY 384 (528)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC---TTTSCEE
T ss_pred CEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---CCCCcEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999997421 1179999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 385 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-- 462 (528)
T 3u4j_A 385 APTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-- 462 (528)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC--
T ss_pred cceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997544
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|.||+|++||++||++||+.|+|+.+.
T Consensus 463 ~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 463 TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 456999999999999999999999999999998864
No 15
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.1e-85 Score=690.04 Aligned_cols=337 Identities=33% Similarity=0.535 Sum_probs=322.0
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|++
T Consensus 144 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll----~eaGlP~gvv~vv~g~~ 219 (505)
T 3prl_A 144 KIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEAL----ADAGAPEGIIQVVTGRG 219 (505)
T ss_dssp EEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHH----HHTTCCTTSEEECCCCH
T ss_pred ceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH----HHhCcCcCeEEEEeCCC
Confidence 45789999999999999999999999999999999999999999999999998887765 57899999999999965
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ +||+|+||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 220 ~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 297 (505)
T 3prl_A 220 SVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIK 297 (505)
T ss_dssp HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCc
Confidence 78899987 8999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++++|+|. +++++||++++++++++.+++++++++|+++++||. ..|+|++
T Consensus 298 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~-------~~g~~~~ 369 (505)
T 3prl_A 298 RVFVQDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNK-------RQGNLLS 369 (505)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTEEC
T ss_pred eEEEeHHHHHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCceeC
Confidence 99999999999999999999999999999 999999999999999999999999999999999997 3689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.... .
T Consensus 370 PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~-~ 448 (505)
T 3prl_A 370 PTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERG-P 448 (505)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSC-S
T ss_pred CeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986533 3
Q ss_pred CCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 339 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 339 ~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 449 ~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 449 DHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp TTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeC
Confidence 56999999999999999999999999999998764
No 16
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-85 Score=688.51 Aligned_cols=342 Identities=34% Similarity=0.577 Sum_probs=324.5
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.
T Consensus 138 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~ 213 (495)
T 3b4w_A 138 GQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFA----EVGLPEGVLSVVPGGI 213 (495)
T ss_dssp EEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHH----HTTCCTTSEEECCBSH
T ss_pred ceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCH
Confidence 356899999999999999999999999999999999999999999999999999888765 6899999999999955
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccE
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 179 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 179 (437)
+.+++|++ +||+|+||||+.+|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|
T Consensus 214 ~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~r 293 (495)
T 3b4w_A 214 ETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTR 293 (495)
T ss_dssp HHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEE
T ss_pred HHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence 78999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccccc
Q 013765 180 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 259 (437)
Q Consensus 180 v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 259 (437)
||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||..... ...|+|++|
T Consensus 294 vlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~P 371 (495)
T 3b4w_A 294 ILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQP 371 (495)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCC
T ss_pred EEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999974210 125899999
Q ss_pred eeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCCC
Q 013765 260 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 339 (437)
Q Consensus 260 tvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~ 339 (437)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. ..+
T Consensus 372 Tvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~---~~~ 448 (495)
T 3b4w_A 372 TVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA---FDP 448 (495)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC---CCT
T ss_pred EEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC---CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999875 245
Q ss_pred CCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 340 SLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 340 ~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 449 ~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 449 GSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp TSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred CCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence 699999999999999999999999999999764
No 17
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.7e-85 Score=688.44 Aligned_cols=340 Identities=30% Similarity=0.534 Sum_probs=324.0
Q ss_pred cceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-
Q 013765 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 101 (437)
Q Consensus 23 ~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~- 101 (437)
..+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++
T Consensus 171 ~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~g~ 246 (517)
T 2o2p_A 171 LTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTL----KAGIPKGVVNILPGSGS 246 (517)
T ss_dssp EEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----HTTCCTTSEEECCSCHH
T ss_pred eEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHH----HhCCCcCeEEEEeCCCH
Confidence 56899999999999999999999999999999999999999999999999999888764 6899999999999966
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhh-ccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa-~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ +||+|+||||+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 247 ~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~ 326 (517)
T 2o2p_A 247 LVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAG 326 (517)
T ss_dssp HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEE
T ss_pred HHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCe
Confidence 67899988 8999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... ...|+|++
T Consensus 327 rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~ 402 (517)
T 2o2p_A 327 RLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQ 402 (517)
T ss_dssp EEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBC
T ss_pred EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC----CCCCCeEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999742 13689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCC--HHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
|||+.+++++|++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 403 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~- 481 (517)
T 2o2p_A 403 PTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT- 481 (517)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC-
T ss_pred CEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC-
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999999987443
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|+||+|+++|+++|++||+.|+|+.+
T Consensus 482 -~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 482 -DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp -CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred -CCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 34699999999999999999999999999999763
No 18
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3e-85 Score=686.07 Aligned_cols=342 Identities=32% Similarity=0.541 Sum_probs=324.7
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 150 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gv~~vv~g~ 225 (501)
T 1bxs_A 150 NFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI----KEAGFPPGVVNIVPGY 225 (501)
T ss_dssp SEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCSC
T ss_pred CcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHH----HHhCCCcceEEEEecC
Confidence 345689999999999999999999999999999999999999999999999999888775 4689999999999995
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhh-ccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa-~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 226 ~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a 305 (501)
T 1bxs_A 226 GPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIA 305 (501)
T ss_dssp TTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTC
T ss_pred chHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 4 78999998 7999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
++|||||++++|+|+++|+++++++++|+|.++++++||++++++++|+++++++++++|+++++||... ...|+|
T Consensus 306 ~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~ 381 (501)
T 1bxs_A 306 ASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYF 381 (501)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCE
T ss_pred CCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999731 236899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 382 ~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~- 460 (501)
T 1bxs_A 382 IQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV- 460 (501)
T ss_dssp ECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-
T ss_pred eCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|+++|+++|++|++.|+|+.+
T Consensus 461 -~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 461 -SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp -CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred -CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 34699999999999999999999999999999875
No 19
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1e-85 Score=689.25 Aligned_cols=341 Identities=29% Similarity=0.511 Sum_probs=326.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|+
T Consensus 152 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~----ea-lP~gv~nvv~g~ 226 (498)
T 4f3x_A 152 GHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIA----DI-LPEGVVNVITGR 226 (498)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHH----TT-SCTTSEEECCCC
T ss_pred cccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHH----Hh-CCcCeEEEEeCC
Confidence 4567899999999999999999999999999999999999999999999999999888875 56 999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 227 ~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 306 (498)
T 4f3x_A 227 GETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAA 306 (498)
T ss_dssp TTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCE
T ss_pred chHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCC
Confidence 6 68999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCC-eEeecCCCCCCCCCCCccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGA-EILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga-~v~~gG~~~~~~~~~~g~~ 256 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+ ++++||... +..|+|
T Consensus 307 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~ 382 (498)
T 4f3x_A 307 CRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFF 382 (498)
T ss_dssp EEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCC
T ss_pred ceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcE
Confidence 999999999999999999999999999999999999999999999999999999999999 999999742 247999
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+.
T Consensus 383 ~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~ 462 (498)
T 4f3x_A 383 FQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT 462 (498)
T ss_dssp BCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC
T ss_pred ECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986653
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
+.+||||+|+||+|+++|+++|++||+.|+|+.+
T Consensus 463 --~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 463 --NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp --TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred --CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 5699999999999999999999999999999764
No 20
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.8e-85 Score=687.61 Aligned_cols=341 Identities=34% Similarity=0.537 Sum_probs=324.5
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|++
T Consensus 150 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~ 225 (500)
T 1o04_A 150 FFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI----KEAGFPPGVVNIVPGFG 225 (500)
T ss_dssp EEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTSEEECCBCT
T ss_pred ceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHH----HHhCCCcCeEEEEecCc
Confidence 45689999999999999999999999999999999999999999999999999888776 46899999999999954
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhh-ccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS-KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa-~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+.+++|++ +||+|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 226 ~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 305 (500)
T 1o04_A 226 PTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAG 305 (500)
T ss_dssp TTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCE
T ss_pred HHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCC
Confidence 78999998 7999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||... ...|+|+
T Consensus 306 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~ 381 (500)
T 1o04_A 306 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFI 381 (500)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCB
T ss_pred CEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCee
Confidence 999999999999999999999999999999999999999999999999999999999999999999731 2368999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 382 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-- 459 (500)
T 1o04_A 382 QPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-- 459 (500)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC--
T ss_pred CCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|+++|+++|++|++.|+|+.+
T Consensus 460 ~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 460 GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 34699999999999999999999999999999875
No 21
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=2.8e-85 Score=687.03 Aligned_cols=346 Identities=34% Similarity=0.554 Sum_probs=325.6
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++
T Consensus 147 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----~aGlP~gvv~vv~g~~ 222 (503)
T 1a4s_A 147 AFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFH----EAGVPVGLVNVVQGGA 222 (503)
T ss_dssp CEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCSH
T ss_pred ceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCcCeEEEEecCc
Confidence 467899999999999999999999999999999999999999999999999999888764 7899999999999965
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccE
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 179 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 179 (437)
+.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|
T Consensus 223 ~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~r 302 (503)
T 1a4s_A 223 ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTR 302 (503)
T ss_dssp HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCE
T ss_pred hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcE
Confidence 77889988 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC--CCCcccc
Q 013765 180 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE--GAVDQYF 257 (437)
Q Consensus 180 v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~--~~~g~~~ 257 (437)
||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||....... ...|+|+
T Consensus 303 vlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~ 382 (503)
T 1a4s_A 303 VFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382 (503)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCB
T ss_pred EEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999997421000 0358999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 383 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-- 460 (503)
T 1a4s_A 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-- 460 (503)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC--
T ss_pred CCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|+||+|+++|++||++||+.|+|+.+.
T Consensus 461 ~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 461 PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 346899999999999999999999999999998753
No 22
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=3.9e-85 Score=683.35 Aligned_cols=342 Identities=30% Similarity=0.546 Sum_probs=325.6
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 136 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~----~~aGlP~gvv~vv~g~ 211 (481)
T 3jz4_A 136 DKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELA----IRAGVPAGVFNVVTGS 211 (481)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHH----HHHTCCTTTEEECCBC
T ss_pred CceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH----HHhCcCCCeEEEEeCC
Confidence 456789999999999999999999999999999999999999999999999999888775 4689999999999996
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 212 ~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 291 (481)
T 3jz4_A 212 AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCA 291 (481)
T ss_dssp THHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSE
T ss_pred ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCC
Confidence 5 78899988 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||... +..|+|+
T Consensus 292 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~ 367 (481)
T 3jz4_A 292 NRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFF 367 (481)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCB
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999999742 2458999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 368 ~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-- 445 (481)
T 3jz4_A 368 QPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-- 445 (481)
T ss_dssp CCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC--
T ss_pred ccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|+||+|++||++||++||+.|+|+..
T Consensus 446 ~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 446 NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 34689999999999999999999999999999763
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=5.3e-85 Score=682.05 Aligned_cols=341 Identities=31% Similarity=0.530 Sum_probs=325.0
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++
T Consensus 134 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~ 209 (479)
T 2imp_A 134 ENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD----EIGLPRGVFNLVLGRG 209 (479)
T ss_dssp EEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSCT
T ss_pred ceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHH----HhCCCcCeEEEEECCc
Confidence 467899999999999999999999999999999999999999999999999999888765 6899999999999976
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ ++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 210 ~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~ 289 (479)
T 2imp_A 210 ETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAE 289 (479)
T ss_dssp TTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCS
T ss_pred HHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCc
Confidence 67898987 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCC-CCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLA-GKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
|||||++++|+|+++|+++++++++|+|.+ +++++|||+++.+++++++++++++++|+++++||... +..|+|+
T Consensus 290 rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~ 365 (479)
T 2imp_A 290 RVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAV----EGKGYYY 365 (479)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCC
T ss_pred EEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCceE
Confidence 999999999999999999999999999999 99999999999999999999999999999999999741 2358999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+
T Consensus 366 ~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-- 443 (479)
T 2imp_A 366 PPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-- 443 (479)
T ss_dssp CCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC--
T ss_pred CCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997655
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|++||++||++||+.|+|+.+
T Consensus 444 ~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 444 AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 35699999999999999999999999999999764
No 24
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.2e-84 Score=681.02 Aligned_cols=340 Identities=32% Similarity=0.548 Sum_probs=320.5
Q ss_pred ccceEE-EeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 22 KKAKVE-FHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 22 ~~~~~~-~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
...+++ ++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 152 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~----~eaGlP~gvvnvv~g~ 227 (497)
T 3i44_A 152 NEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEIL----DEAALPSGVFNLINGD 227 (497)
T ss_dssp CSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHH----HHTTCCTTSEEECCCC
T ss_pred ceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHH----HHhCcCCCeEEEEeCC
Confidence 346788 99999999999999999999999999999999999999999999999888775 5789999999999996
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+++|+.|++.+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|+++
T Consensus 228 ~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~ 306 (497)
T 3i44_A 228 GANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAP 306 (497)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCC
T ss_pred ChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccC
Confidence 6 78999987 899999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||+++++++++++++|++++++|+++++||..... ....|+|+
T Consensus 307 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~~~~g~~~ 385 (497)
T 3i44_A 307 TRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM-GMERGYYV 385 (497)
T ss_dssp CEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCT-TCCSSCCC
T ss_pred CEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-cCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999942111 12369999
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
+|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+. ..
T Consensus 386 ~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~---~~ 462 (497)
T 3i44_A 386 RPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH---EL 462 (497)
T ss_dssp CCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC---CC
T ss_pred CCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC---CC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999952 22
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEE
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~ 370 (437)
.+.+||||+|.||+|+++|+++|++||+.|+|+
T Consensus 463 ~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 463 PGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp CTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred CCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 356899999999999999999999999999985
No 25
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-85 Score=684.77 Aligned_cols=346 Identities=29% Similarity=0.490 Sum_probs=325.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 153 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~ 228 (515)
T 2d4e_A 153 DWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILK----EADLPPGVFNLVQGF 228 (515)
T ss_dssp TEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCC
T ss_pred CceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHH----HhCCCcCeEEEEeCC
Confidence 3467899999999999999999999999999999999999999999999999999888764 789999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
+ +.+++|++ +||+|+||||+.+|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 229 ~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 308 (515)
T 2d4e_A 229 GEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTAS 308 (515)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCC
T ss_pred chHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 5 78899987 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC----CCCCC
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL----SEGAV 253 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~----~~~~~ 253 (437)
+|||||++++|+|+++|+++++++++|+|.++++++||+++++++++++++|++++++|+++++||..... .....
T Consensus 309 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~ 388 (515)
T 2d4e_A 309 SRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSR 388 (515)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTT
T ss_pred eEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999974210 00025
Q ss_pred cccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCc
Q 013765 254 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 333 (437)
Q Consensus 254 g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~ 333 (437)
|+|++|||+.+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 389 g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 467 (515)
T 2d4e_A 389 GNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHN 467 (515)
T ss_dssp TTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSC
T ss_pred CceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence 89999999999 99999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred ccCCCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 334 SNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 334 ~~~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
. ..+.+||||+|+||+|++||++||++||+.|+|+.+.
T Consensus 468 ~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 468 V--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp C--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred C--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 4 2456999999999999999999999999999998763
No 26
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=7.7e-85 Score=682.07 Aligned_cols=339 Identities=28% Similarity=0.524 Sum_probs=322.8
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++ +|+|++|+|+|++
T Consensus 151 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~----ea-lP~gvv~vv~g~~ 225 (495)
T 1wnd_A 151 HTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK----DI-FPAGVVNILFGRG 225 (495)
T ss_dssp EEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHT----TT-SCTTSEEECCCCT
T ss_pred ceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHH----Hh-CCcCeEEEEeCCC
Confidence 356899999999999999999999999999999999999999999999999999888875 56 9999999999954
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 226 ~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 305 (495)
T 1wnd_A 226 KTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 305 (495)
T ss_dssp TTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCC
T ss_pred HHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCc
Confidence 78999998 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcC-CeEeecCC-CCCCCCCCCccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKG-AEILARGS-FGHLSEGAVDQY 256 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G-a~v~~gG~-~~~~~~~~~g~~ 256 (437)
|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++++++++++++| +++++||. .. ..|+|
T Consensus 306 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~ 380 (495)
T 1wnd_A 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYY 380 (495)
T ss_dssp EEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCC
T ss_pred EEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCe
Confidence 9999999999999999999999999999999999999999999999999999999999 99999986 31 26899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 381 ~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~- 459 (495)
T 1wnd_A 381 YAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML- 459 (495)
T ss_dssp BCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-
T ss_pred eCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 460 -~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 460 -VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp -CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred -CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 35699999999999999999999999999999763
No 27
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.9e-85 Score=689.49 Aligned_cols=344 Identities=25% Similarity=0.456 Sum_probs=325.6
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 163 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~----~eaGlP~gvv~vv~g~ 238 (538)
T 3qan_A 163 GEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVL----EDAGLPKGVINYVPGS 238 (538)
T ss_dssp TEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHH----HHTTCCTTSEEECCBC
T ss_pred CcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH----HHhCCCCCeEEEEecC
Confidence 457889999999999999999999999999999999999999999999999998888765 4789999999999996
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhcc------CCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCC
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT------LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~------~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 171 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.++++ +||+++|||||||+||++|||++.|++.+++++|.|+|
T Consensus 239 ~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G 318 (538)
T 3qan_A 239 GAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSG 318 (538)
T ss_dssp TTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGG
T ss_pred CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5 78999997 899999999999999999999998 99999999999999999999999999999999999999
Q ss_pred CccccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCC
Q 013765 172 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 251 (437)
Q Consensus 172 Q~C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~ 251 (437)
|.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++| ++++||... .
T Consensus 319 Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~----~ 393 (538)
T 3qan_A 319 QKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD----S 393 (538)
T ss_dssp CSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE----C
T ss_pred CCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC----C
Confidence 99999999999999999999999999999999999999999999999999999999999999999 999999742 1
Q ss_pred CCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECC
Q 013765 252 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 331 (437)
Q Consensus 252 ~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~ 331 (437)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 394 ~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~ 473 (538)
T 3qan_A 394 STGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNR 473 (538)
T ss_dssp SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESS
T ss_pred CCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeC
Confidence 26999999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CcccCCCCCCCccccCCCCCC-CcccHHHHHhcceeeEEEEcc
Q 013765 332 FASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 332 ~~~~~~~~~~PfGG~~~SG~G-~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.......+.+||||+|.||+| +++|++||++||+.|+|+.+.
T Consensus 474 ~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~~ 516 (538)
T 3qan_A 474 NCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEMY 516 (538)
T ss_dssp CSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEec
Confidence 444433456999999999999 999999999999999998864
No 28
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.4e-85 Score=682.68 Aligned_cols=354 Identities=31% Similarity=0.476 Sum_probs=333.3
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .++|+|+|++++++|+.
T Consensus 118 ~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~----~~ag~p~gv~~~v~g~~ 193 (474)
T 4h7n_A 118 IALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMAL----NTVPELRDVLIFVEGGG 193 (474)
T ss_dssp EEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHH----TTCTTTTTTEEECCCCH
T ss_pred ccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhh----hhhcccccceeeccccc
Confidence 34567889999999999999999999999999999999999999999999988877664 57899999999999988
Q ss_pred hhHHHHHhccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccEEE
Q 013765 102 ETGEALVSSVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 181 (437)
Q Consensus 102 ~~~~~L~~~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~ 181 (437)
+.+..|+.++|+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|
T Consensus 194 ~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~ 273 (474)
T 4h7n_A 194 ETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIY 273 (474)
T ss_dssp HHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred hhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeeccccc
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccccee
Q 013765 182 VHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPTV 261 (437)
Q Consensus 182 V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptv 261 (437)
||++++|+|++++.++++++++|+|.++++++||++++.+++++.+++++++++|+++++||... ....|+|++|||
T Consensus 274 V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv 350 (474)
T 4h7n_A 274 VAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVE---ELGGGWWCRPTV 350 (474)
T ss_dssp EEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCE---EETTEEECCCEE
T ss_pred chHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCccc---ccCCCcccCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998742 134689999999
Q ss_pred eecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCCCCC
Q 013765 262 IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSL 341 (437)
Q Consensus 262 l~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~ 341 (437)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+...+...+.+
T Consensus 351 ~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~ 430 (474)
T 4h7n_A 351 MTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEG 430 (474)
T ss_dssp EESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCS
T ss_pred EEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777666779
Q ss_pred CccccCCCCCC-CcccHHHHHhcceeeEEEEcccccccccCCCCCCCC
Q 013765 342 PFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQY 388 (437)
Q Consensus 342 PfGG~~~SG~G-~~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~ 388 (437)
||||+|.||+| +++|.+||++||+.|+|+.+.. ..+.|+||
T Consensus 431 pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~------~~~~p~w~ 472 (474)
T 4h7n_A 431 EKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTN------STSDPWWF 472 (474)
T ss_dssp CCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECS------SSCCTTSC
T ss_pred CCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCC------CCCCCCCc
Confidence 99999999998 8999999999999999998764 33456665
No 29
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.1e-84 Score=677.15 Aligned_cols=343 Identities=30% Similarity=0.557 Sum_probs=327.3
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+
T Consensus 117 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l----~~aglP~gv~~vv~g~ 192 (462)
T 3etf_A 117 NQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARIL----AEAGTPAGVYGWVNAN 192 (462)
T ss_dssp GGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH----HHTTCCBTTEEECCCC
T ss_pred CceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHH----HHhCCCcCeEEEEECC
Confidence 456789999999999999999999999999999999999999999999999998887765 5789999999999998
Q ss_pred hhhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 101 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 101 ~~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
.+.+++|++ ++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 193 ~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 272 (462)
T 3etf_A 193 NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAK 272 (462)
T ss_dssp HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEE
T ss_pred HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCc
Confidence 888888987 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... +..|+|++
T Consensus 273 rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~ 348 (462)
T 3etf_A 273 RFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKI----AGEGNYYA 348 (462)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBC
T ss_pred EEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCcEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999742 24689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .
T Consensus 349 Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~--~ 426 (462)
T 3etf_A 349 ATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSAS--D 426 (462)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCC--C
T ss_pred eEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997543 3
Q ss_pred CCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 339 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 339 ~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
+.+||||+|+||+|+++|++||++||+.|+|+.++
T Consensus 427 ~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 427 ARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp TTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 56899999999999999999999999999998764
No 30
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-84 Score=683.83 Aligned_cols=342 Identities=30% Similarity=0.487 Sum_probs=310.4
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHH-HHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~-~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++ .++++++ .++|+|+|++++|+|
T Consensus 139 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll----~~aGlP~gvv~vv~g 214 (508)
T 3r64_A 139 GKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIF----EEAGVPAGVISTVAG 214 (508)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHH----HTTTCCTTTEEECCC
T ss_pred CceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHH----HHhCcCcCeEEEEeC
Confidence 35678999999999999999999999999999999999999999999999999 8877764 579999999999999
Q ss_pred C-hhhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhc--cCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcc
Q 013765 100 F-AETGEALVS--SVDKIIFVGSPGVGRMIMRNASK--TLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 174 (437)
Q Consensus 100 ~-~~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~--~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C 174 (437)
+ .+.+++|++ +||+|+||||+++|+.|++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|
T Consensus 215 ~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C 294 (508)
T 3r64_A 215 AGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQIC 294 (508)
T ss_dssp CTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTT
T ss_pred CCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCc
Confidence 7 478999998 89999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCc
Q 013765 175 AGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD 254 (437)
Q Consensus 175 ~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g 254 (437)
++++|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||. ..|
T Consensus 295 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~-------~~g 367 (508)
T 3r64_A 295 MSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP-------IEG 367 (508)
T ss_dssp TCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCC-------EET
T ss_pred ccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCC-------CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997 268
Q ss_pred ccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcc
Q 013765 255 QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFAS 334 (437)
Q Consensus 255 ~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~ 334 (437)
+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..
T Consensus 368 ~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~ 447 (508)
T 3r64_A 368 RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTV 447 (508)
T ss_dssp TEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC---
T ss_pred cEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEccc
Q 013765 335 NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 335 ~~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
+ ..+.+||||+|.||+|++||+++|++||+.|+|+.+..
T Consensus 448 ~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 448 N-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRS 486 (508)
T ss_dssp ------------------CCCHHHHHHHTEEEEEEEEECC
T ss_pred C-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecc
Confidence 5 34569999999999999999999999999999988753
No 31
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.2e-84 Score=679.40 Aligned_cols=347 Identities=31% Similarity=0.525 Sum_probs=327.5
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 133 ~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~ 208 (490)
T 2ve5_A 133 TSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT----EAGVPDGVFNVLTGS 208 (490)
T ss_dssp TEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HHTCCTTSEEECCSC
T ss_pred CceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEeCC
Confidence 4567899999999999999999999999999999999999999999999999999888764 679999999999995
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHh-hccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNA-SKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~a-a~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
+ +.+++|++ +||+|+||||+.+|+.|++.+ ++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 209 ~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a 288 (490)
T 2ve5_A 209 GREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN 288 (490)
T ss_dssp TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTC
T ss_pred ChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccC
Confidence 4 78999988 799999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||..........|+|
T Consensus 289 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~ 368 (490)
T 2ve5_A 289 GTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368 (490)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTC
T ss_pred CCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999997432111246899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 369 ~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~- 447 (490)
T 2ve5_A 369 VAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES- 447 (490)
T ss_dssp BCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-
T ss_pred EccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997544
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|.||+|+++|.++|++||+.|+|+.+.
T Consensus 448 -~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~~~ 483 (490)
T 2ve5_A 448 -PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp -CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred -CCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEEcc
Confidence 356999999999999999999999999999998754
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.8e-84 Score=680.50 Aligned_cols=337 Identities=28% Similarity=0.446 Sum_probs=322.2
Q ss_pred cceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCChh
Q 013765 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFAE 102 (437)
Q Consensus 23 ~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~~ 102 (437)
..+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+++
T Consensus 150 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----eaGlP~gvv~vv~g~~~ 225 (501)
T 1uxt_A 150 EGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL----DAGFPPDAIALLNLPGK 225 (501)
T ss_dssp EEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHH----HTTCCTTSEEECCCCHH
T ss_pred eEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHH----HhCCCcCeEEEEeCCcH
Confidence 67899999999999999999999999999999999999999999999999999888764 68999999999999777
Q ss_pred hHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccEE
Q 013765 103 TGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERF 180 (437)
Q Consensus 103 ~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v 180 (437)
.+++|++ +||+|+||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus 226 ~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv 303 (501)
T 1uxt_A 226 EAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV 303 (501)
T ss_dssp HHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE
T ss_pred HHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEE
Confidence 7899987 8999999999999999999988 99999999999999999999999999999999999999999999999
Q ss_pred EEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCc-ccccc
Q 013765 181 YVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVD-QYFPP 259 (437)
Q Consensus 181 ~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g-~~~~P 259 (437)
|||++++|+|+++|+++++++++|+|.++++++|||+++++++++++++++++++|+++++||.. .| +|++|
T Consensus 304 lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~P 376 (501)
T 1uxt_A 304 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQP 376 (501)
T ss_dssp EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCC
T ss_pred EeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECC
Confidence 99999999999999999999999999999999999999999999999999999999999999972 57 89999
Q ss_pred eeeecCC---CCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 260 TVIVNVN---HTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 260 tvl~~~~---~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
||+.+++ ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. +.
T Consensus 377 tvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~-~~ 455 (501)
T 1uxt_A 377 TFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP-RH 455 (501)
T ss_dssp EEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC-CC
T ss_pred EEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC-CC
Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999874 22
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
..+.+||||+|+||+|++||+++|++||+.|+|+.+.
T Consensus 456 ~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 492 (501)
T 1uxt_A 456 GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNY 492 (501)
T ss_dssp TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEEC
T ss_pred CCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEec
Confidence 3456999999999999999999999999999998864
No 33
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=8.6e-85 Score=681.15 Aligned_cols=341 Identities=32% Similarity=0.540 Sum_probs=324.4
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEe--
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT-- 98 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~-- 98 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+
T Consensus 137 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~~~ 212 (487)
T 2w8n_A 137 DRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELA----SQAGIPSGVYNVIPCS 212 (487)
T ss_dssp TCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHH----HHHTCCTTSEEECCCC
T ss_pred CceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCeEEEEecC
Confidence 446789999999999999999999999999999999999999999999999999888776 46899999999999
Q ss_pred -CCh-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcc
Q 013765 99 -GFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 174 (437)
Q Consensus 99 -g~~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C 174 (437)
|++ +.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|
T Consensus 213 ~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C 292 (487)
T 2w8n_A 213 RKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC 292 (487)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCC
T ss_pred CCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCcc
Confidence 854 67899987 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEecccHHHHHHHHHHHhhc-cccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCC
Q 013765 175 AGAERFYVHRDIYALFVSQVAKIVKS-VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 253 (437)
Q Consensus 175 ~a~~~v~V~~~v~d~f~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~ 253 (437)
++++|||||++++|+|+++|++++++ +++|+|.++++++|||+++.+++++++++++++++|+++++||.. ...
T Consensus 293 ~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~-----~~~ 367 (487)
T 2w8n_A 293 VCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR-----HQL 367 (487)
T ss_dssp SEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSB-----CTT
T ss_pred ccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-----CCC
Confidence 99999999999999999999999999 999999999999999999999999999999999999999999973 235
Q ss_pred cc-cccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCC
Q 013765 254 DQ-YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDF 332 (437)
Q Consensus 254 g~-~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~ 332 (437)
|+ |++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++
T Consensus 368 g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~ 447 (487)
T 2w8n_A 368 GKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEG 447 (487)
T ss_dssp CTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCS
T ss_pred CCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCC
Confidence 88 99999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 333 ASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 333 ~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
..+. +.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 448 ~~~~--~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 448 LISS--VECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp CCCC--TTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred CCCC--CCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 6553 4589999999999999999999999999999864
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.7e-83 Score=675.86 Aligned_cols=342 Identities=27% Similarity=0.431 Sum_probs=322.3
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+
T Consensus 164 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~----eaGlP~gvv~vv~g~ 239 (516)
T 1uzb_A 164 GEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFH----EAGFPPGVVNFLPGV 239 (516)
T ss_dssp TEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH----HHTCCTTSEEECCCS
T ss_pred CceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHH----HhCCCcCeEEEEeCC
Confidence 3467899999999999999999999999999999999999999999999999998887764 689999999999995
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhh------ccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCC
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa------~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 171 (437)
+ +.+++|++ +||+|+||||+++|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+|
T Consensus 240 ~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G 319 (516)
T 1uzb_A 240 GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQG 319 (516)
T ss_dssp SSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGG
T ss_pred CchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCC
Confidence 4 78999998 7999999999999999999998 8899999999999999999999999999999999999999
Q ss_pred CccccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCC
Q 013765 172 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 251 (437)
Q Consensus 172 Q~C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~ 251 (437)
|.|++++|||||++++|+|+++|+++++++++|+| ++++++|||+++.+++++++++++++++| ++++||... +
T Consensus 320 Q~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~ 393 (516)
T 1uzb_A 320 QKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----E 393 (516)
T ss_dssp CSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----S
T ss_pred CccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----C
Confidence 99999999999999999999999999999999999 99999999999999999999999999889 899999731 2
Q ss_pred CCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECC
Q 013765 252 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 331 (437)
Q Consensus 252 ~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~ 331 (437)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 394 ~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~ 473 (516)
T 1uzb_A 394 GEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNR 473 (516)
T ss_dssp SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESS
T ss_pred CCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCccccCCCCCCC-cccHHHHHhcceeeEEEEc
Q 013765 332 FASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 332 ~~~~~~~~~~PfGG~~~SG~G~-~~G~~~l~~ft~~k~v~~~ 372 (437)
+..+...+.+||||+|.||+|+ .+|.+++++||+.|+|+.+
T Consensus 474 ~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 474 KITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp CSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 7655445679999999999995 6899999999999999763
No 35
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=5.2e-84 Score=675.78 Aligned_cols=341 Identities=30% Similarity=0.488 Sum_probs=303.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHH-HHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSG-CFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~-~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++ .++++++ .++|+|+|++|+|+|
T Consensus 134 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l----~~aGlP~gvv~vv~g 209 (485)
T 4dng_A 134 GKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAF----EHAGLPAGVLNVMLT 209 (485)
T ss_dssp TEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHH----HHTTCCTTSEEECCC
T ss_pred CceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH----HHhCcCCCeEEEEeC
Confidence 35678999999999999999999999999999999999999999999999999 7776665 579999999999999
Q ss_pred Ch-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 100 FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 100 ~~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
++ +.+++|++ ++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++
T Consensus 210 ~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a 289 (485)
T 4dng_A 210 DVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMI 289 (485)
T ss_dssp CHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CC
T ss_pred CChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence 87 58899988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||. ..|+|
T Consensus 290 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~-------~~g~~ 362 (485)
T 4dng_A 290 INRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RVGNV 362 (485)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC-------EETTE
T ss_pred CCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCC-------CCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 26899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++..+
T Consensus 363 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~- 441 (485)
T 4dng_A 363 LTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN- 441 (485)
T ss_dssp ECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----
T ss_pred ECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998655
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
..+.+||||+|.||+|++||+++|++||+.|+|+.+.
T Consensus 442 ~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 442 DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp -------------------CHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 3456999999999999999999999999999998754
No 36
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.9e-83 Score=671.16 Aligned_cols=342 Identities=23% Similarity=0.367 Sum_probs=324.1
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|+.
T Consensus 133 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~----~aGlP~gvv~vv~g~~ 208 (486)
T 1t90_A 133 VEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFE----KAGLPKGVFNVVYGAH 208 (486)
T ss_dssp EEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHH----HTTCCTTSEEECCCSH
T ss_pred ceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH----HhCCCCCEEEEEECCH
Confidence 456889999999999999999999999999999999999999999999999999888764 6899999999999977
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccE
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 179 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 179 (437)
+.+++|++ +||+|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|
T Consensus 209 ~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~r 288 (486)
T 1t90_A 209 DVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAV 288 (486)
T ss_dssp HHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCe
Confidence 88899988 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -EEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 180 -FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 180 -v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
||||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||... .+..|+|++
T Consensus 289 vv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~ 364 (486)
T 1t90_A 289 VTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVG 364 (486)
T ss_dssp EEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCC
T ss_pred eEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEEC
Confidence 999999 999999999999999999999999999999999999999999999999999999999732 123689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++. ....
T Consensus 365 Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~-~~~~ 443 (486)
T 1t90_A 365 PTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV-PAPM 443 (486)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC-CCCC
T ss_pred CEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999863 3233
Q ss_pred CCCCccccCCCCCC--CcccHHHHHhcceeeEEEEc
Q 013765 339 QSLPFGGVKDSGFG--RFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 339 ~~~PfGG~~~SG~G--~~~G~~~l~~ft~~k~v~~~ 372 (437)
+.+||||+|.||+| +++|++||++||+.|+|+.+
T Consensus 444 ~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 444 AFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp TTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred CCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 56999999999999 89999999999999999875
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.3e-83 Score=668.97 Aligned_cols=334 Identities=33% Similarity=0.504 Sum_probs=319.2
Q ss_pred cc-eEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 23 KA-KVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 23 ~~-~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
.. +++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++
T Consensus 135 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~----~aGlP~gvv~vv~g~~ 210 (475)
T 1euh_A 135 KIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFA----EAGLPAGVFNTITGRG 210 (475)
T ss_dssp EEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHH----HHTCCTTTEEECCCCH
T ss_pred eeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHH----HhCCCcCeEEEEeCCc
Confidence 55 899999999999999999999999999999999999999999999999999888765 6899999999999975
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ ++|+|+||||+++|+.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 211 ~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~ 288 (475)
T 1euh_A 211 SEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVK 288 (475)
T ss_dssp HHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEE
T ss_pred HHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCc
Confidence 67899987 7999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++++|+|.+ ++++|||+++++++++++++++++++|+++++||.. .|+|++
T Consensus 289 rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~ 360 (475)
T 1euh_A 289 RVLVMESVADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLIC 360 (475)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEEC
T ss_pred EEEEehhHHHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeC
Confidence 999999999999999999999999999999 999999999999999999999999999999999872 589999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECC-CcccCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYM 337 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~-~~~~~~ 337 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ +..+
T Consensus 361 Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-- 438 (475)
T 1euh_A 361 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-- 438 (475)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC--
T ss_pred CEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC--
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 5443
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|+++|++||++||+.|+|+.+
T Consensus 439 ~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 439 TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 35699999999999999999999999999999764
No 38
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3e-83 Score=665.16 Aligned_cols=335 Identities=30% Similarity=0.454 Sum_probs=316.2
Q ss_pred ccccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 20 IHKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 20 ~~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
.+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+|
T Consensus 120 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~----a-lP~gvv~vv~g 194 (457)
T 3lns_A 120 APSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE----A-FAPEYVAVIQG 194 (457)
T ss_dssp CSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHH----H-CCTTTEEECCC
T ss_pred CCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH----h-CCHhhEEEecC
Confidence 346789999999999999999999999999999999999999999999999999999998765 3 99999999999
Q ss_pred ChhhHHHHHh-ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 100 FAETGEALVS-SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 100 ~~~~~~~L~~-~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+.+++|++ ++|+|+||||+++|+.|++++++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 195 ~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 274 (457)
T 3lns_A 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPD 274 (457)
T ss_dssp CHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEE
T ss_pred CHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCc
Confidence 7788999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|++++++++ |.++ ++||+++++++++++++++++ ++++++||.. +..|+|++
T Consensus 275 rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~-----~~~g~~~~ 341 (457)
T 3lns_A 275 YLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQA-----DVSKRALS 341 (457)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCE-----EGGGTEEC
T ss_pred eEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCcc-----CCCCceeC
Confidence 999999999999999999999987 5555 999999999999999999986 3599999973 24689999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhc-CCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLAND-SRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~-~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
|||+++++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.++++++++++++|+|+||++..+..
T Consensus 342 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~ 421 (457)
T 3lns_A 342 ATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAF 421 (457)
T ss_dssp CEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGG
T ss_pred CEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999865544
Q ss_pred CCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 338 CQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
.+.+||||+|.||+|+++|++||++||+.|+|+..
T Consensus 422 ~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 422 SPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp CTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 56799999999999999999999999999999764
No 39
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.7e-83 Score=670.72 Aligned_cols=342 Identities=31% Similarity=0.536 Sum_probs=301.3
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++. ++|+|+|++|+|+|++
T Consensus 131 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~----~aGlP~gvv~vv~g~~ 206 (478)
T 3ty7_A 131 GDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFD----KVGVPKGVFNLVNGDG 206 (478)
T ss_dssp TTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHH----HHTCCTTTEEECCCCT
T ss_pred ccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHH----HhCcCcCeEEEEECCC
Confidence 467899999999999999999999999999999999999999999999999998888764 6799999999999965
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ ++|+|+||||+++|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 207 ~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~ 286 (478)
T 3ty7_A 207 AGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGT 286 (478)
T ss_dssp TTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCC
T ss_pred hHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCC
Confidence 78999987 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
|||||++++|+|+++|+++++++++|+|.++++++||++++++++++++++++++++|+++++||..... ....|+|++
T Consensus 287 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~~~~g~~~~ 365 (478)
T 3ty7_A 287 RVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE-GLEKGYFAR 365 (478)
T ss_dssp EEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCT-TCCSSCCCC
T ss_pred eEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCcc-ccCCCceeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999952111 124699999
Q ss_pred ceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCC
Q 013765 259 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMC 338 (437)
Q Consensus 259 Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~ 338 (437)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+ .. ..
T Consensus 366 Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~--~~ 442 (478)
T 3ty7_A 366 PTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG--RK 442 (478)
T ss_dssp CEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----
T ss_pred CEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 22 23
Q ss_pred CCCCccccCCCCCCCcccHHHHHhcceeeEEEE
Q 013765 339 QSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVE 371 (437)
Q Consensus 339 ~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~ 371 (437)
+.+||||+|+||+|+++|++||++||+.|+|+.
T Consensus 443 ~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 443 PDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp --------------------CCGGGEEEEEEET
T ss_pred CCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 468999999999999999999999999999873
No 40
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1e-81 Score=666.09 Aligned_cols=353 Identities=24% Similarity=0.347 Sum_probs=327.1
Q ss_pred cceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh-
Q 013765 23 KAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA- 101 (437)
Q Consensus 23 ~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~- 101 (437)
..++++.|+|||++|+|||||+.+..+++++|| +||+||+|||+.+|+++.++++++ .+||+|+|++|+|+|++
T Consensus 193 ~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll----~eAGlP~Gvvnvv~g~g~ 267 (563)
T 4e3x_A 193 NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRIL----REAGLPPNIIQFVPADGP 267 (563)
T ss_dssp EEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHH----HHTTCCTTSEEECCCCHH
T ss_pred ceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHH----HHhCCCCCeEEEEeCCcH
Confidence 345666778999999999999999999999999 599999999999999999887775 47899999999999987
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCC------ccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCc
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTP------VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQN 173 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~p------v~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~ 173 (437)
+.+++|++ +||+|+||||+.+|+.|++.++++++| +++|||||||+||++|||++.|++.+++++|.|+||.
T Consensus 268 ~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~ 347 (563)
T 4e3x_A 268 TFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQK 347 (563)
T ss_dssp HHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCS
T ss_pred HHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCC
Confidence 67899987 899999999999999999999999985 9999999999999999999999999999999999999
Q ss_pred cccccEEEEecccHHHHHHHHHHHhhccccCCC-CCCCCCcccccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCC
Q 013765 174 CAGAERFYVHRDIYALFVSQVAKIVKSVSAGPP-LAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEG 251 (437)
Q Consensus 174 C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~ 251 (437)
|++++|+|||++++|+|+++|+++++++++|+| .++++++||++++.+++++.++|+++++ +|+++++||... +
T Consensus 348 C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~ 423 (563)
T 4e3x_A 348 CSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----E 423 (563)
T ss_dssp TTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----C
T ss_pred CcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----C
Confidence 999999999999999999999999999999999 9999999999999999999999999996 899999999742 2
Q ss_pred CCcccccceeeecCCCCccccccccccCeeeEEEeCC--HHHHHHHh-hcCCCCceeEEecCCHHHHHHHHHHhc--cce
Q 013765 252 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLA-NDSRYGLGCAVFSGSQHRAREIAAQIQ--CGV 326 (437)
Q Consensus 252 ~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~-n~~~~gL~~sv~s~d~~~~~~~~~~l~--~G~ 326 (437)
..|+|++|||+.+++++|++++||+||||++|++|+| +||||+++ |+++|||++||||+|.+++++++++++ +|+
T Consensus 424 ~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~ 503 (563)
T 4e3x_A 424 SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGN 503 (563)
T ss_dssp SSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSE
T ss_pred CCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeE
Confidence 4699999999999999999999999999999999996 79999999 799999999999999999999999976 999
Q ss_pred EEECCCcccCCCCCCCccccCCCCCC-CcccHHHHHhcceeeEEEEcccccccccCCCCCCCCCCc
Q 013765 327 AAINDFASNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRWWPYIKTKIPKPIQYPVA 391 (437)
Q Consensus 327 v~IN~~~~~~~~~~~PfGG~~~SG~G-~~~G~~~l~~ft~~k~v~~~~~~~~~~~~~~~~~~~p~~ 391 (437)
|+||+..+....+.+||||+|.||+| +.+|+++|++|++.|+|.++ | ..+..+|||++
T Consensus 504 v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~-~------~~~~~~~yp~~ 562 (563)
T 4e3x_A 504 FYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKET-H------KPLGDWRYSYM 562 (563)
T ss_dssp EEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE-C------SCCCCSSCTTC
T ss_pred EEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEe-C------cCCCcccCCCC
Confidence 99999866555567999999999998 89999999999999999886 3 23556899975
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.3e-79 Score=649.08 Aligned_cols=346 Identities=18% Similarity=0.280 Sum_probs=313.8
Q ss_pred cceEEEeec-eEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcC-CCCCcEEEEeCC
Q 013765 23 KAKVEFHPL-GVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVG-APENLVDVITGF 100 (437)
Q Consensus 23 ~~~~~~~P~-GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aG-lp~g~v~vv~g~ 100 (437)
..++.++|+ |||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++| +|+|++|+|+|+
T Consensus 143 ~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~----~~aG~lP~gvv~vv~g~ 218 (534)
T 2y53_A 143 SAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADV----VDAGILPPGALSIICGS 218 (534)
T ss_dssp EEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHH----HHHTCSCTTSEEECCSC
T ss_pred cceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH----HHhCCCCCCeEEEEeCC
Confidence 357889997 9999999999999999999999999999999999999999999888876 4689 799999999996
Q ss_pred hh-hHHHHHhccCEEEEeCCHHHHHHHHHHhh--ccCCCccccCCCCCeEEEcCCC-----CHHHHHHHHHHHHhhcCCC
Q 013765 101 AE-TGEALVSSVDKIIFVGSPGVGRMIMRNAS--KTLTPVTLELGGKDAFIVCDDV-----DVPHVAQIAVRAALQSSGQ 172 (437)
Q Consensus 101 ~~-~~~~L~~~vd~v~fTGs~~~g~~v~~~aa--~~~~pv~lElgGk~p~iV~~da-----Dl~~aa~~i~~~~~~n~GQ 172 (437)
++ .++.| ..+|+|+||||+.+|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||
T Consensus 219 ~~~l~~~l-~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ 297 (534)
T 2y53_A 219 SAGLLDQI-RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQ 297 (534)
T ss_dssp CTTSGGGC-CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGC
T ss_pred hHHHHhcc-cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCC
Confidence 53 23322 16899999999999999998875 8999999999999999999999 9999999999999999999
Q ss_pred ccccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC--CC
Q 013765 173 NCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL--SE 250 (437)
Q Consensus 173 ~C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~--~~ 250 (437)
.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.++++++++|+++ .+|+++++||..... ..
T Consensus 298 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~ 376 (534)
T 2y53_A 298 KCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDAD 376 (534)
T ss_dssp CTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCC
T ss_pred cccCCCEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999 689999999973210 01
Q ss_pred CCCcccccceeeecCCCC--ccccccccccCeeeEEEeC---CH-----HHHHHHhhcCCCCceeEEecCCHHHHHHHHH
Q 013765 251 GAVDQYFPPTVIVNVNHT--MKLMQEEAFGPIMPIMKFN---TD-----EEVVKLANDSRYGLGCAVFSGSQHRAREIAA 320 (437)
Q Consensus 251 ~~~g~~~~Ptvl~~~~~~--~~i~~eE~FGPvl~v~~~~---~~-----~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~ 320 (437)
...|+|++|||+.+++++ |.+++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++
T Consensus 377 ~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 456 (534)
T 2y53_A 377 ANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLAL 456 (534)
T ss_dssp TTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHH
T ss_pred CCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHH
Confidence 135899999999999987 6899999999999999999 99 9999999999999999999999999999999
Q ss_pred Hh--ccceEEECCCccc-------CCCCCCCccccCCCCCCCc-ccHHHHHhcceeeEEEEccc
Q 013765 321 QI--QCGVAAINDFASN-------YMCQSLPFGGVKDSGFGRF-AGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 321 ~l--~~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~-~G~~~l~~ft~~k~v~~~~~ 374 (437)
++ ++|+|+||++..+ ...+.+||||+|.||+|++ +|++++++|++.|++...+.
T Consensus 457 ~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~p~ 520 (534)
T 2y53_A 457 ELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAASA 520 (534)
T ss_dssp HHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEEHH
T ss_pred HHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecCHH
Confidence 99 8999999986431 2245699999999999999 69999999999999987653
No 42
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.6e-78 Score=632.97 Aligned_cols=336 Identities=23% Similarity=0.372 Sum_probs=316.1
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+|+|+.
T Consensus 131 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~----~~aGlP~gvv~vv~g~~ 206 (490)
T 3ju8_A 131 ATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAW----IQAGLPAGVLNLVQGGR 206 (490)
T ss_dssp EEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHH----HHTTCCTTTEEECCCSH
T ss_pred CeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHH----HHhCcCcCeEEEEeCCH
Confidence 45678899999999999999999999999999999999999999999999999887765 47899999999999987
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCc-cccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPV-TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv-~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ +||+|+||||+.+|+.|+++++++++|+ ++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 207 ~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~ 286 (490)
T 3ju8_A 207 ETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCAR 286 (490)
T ss_dssp HHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEE
T ss_pred HHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCC
Confidence 88999998 7999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred EEEEeccc-HHHHHHHHHHHhhccccCC-CCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccc
Q 013765 179 RFYVHRDI-YALFVSQVAKIVKSVSAGP-PLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 256 (437)
Q Consensus 179 ~v~V~~~v-~d~f~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~ 256 (437)
|+|||+++ +|+|+++|+++++++++|+ |.++++++||++++++++++++++++++++|+++++||... +..|+|
T Consensus 287 rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~ 362 (490)
T 3ju8_A 287 RLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAAL 362 (490)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC----STTSCC
T ss_pred EEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCE
Confidence 99999996 9999999999999999999 99999999999999999999999999999999999999742 257899
Q ss_pred ccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccC
Q 013765 257 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNY 336 (437)
Q Consensus 257 ~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~ 336 (437)
++|||+. ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....
T Consensus 363 ~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~ 441 (490)
T 3ju8_A 363 LTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGA 441 (490)
T ss_dssp CCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCC
T ss_pred EccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCC
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999976533
Q ss_pred CCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 337 MCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 337 ~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||+|.||++ ++++||+.|+|+...
T Consensus 442 -~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 442 -ASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp -CTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred -CCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 356999999999985 478999999887653
No 43
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=8.8e-79 Score=676.92 Aligned_cols=344 Identities=25% Similarity=0.426 Sum_probs=325.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+..+++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++.++++++ .+||+|+|++|+|+|+
T Consensus 657 g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell----~eAGlP~gvvnvV~G~ 732 (1026)
T 4f9i_A 657 GELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELF----REAGLPEGVFNFTPGR 732 (1026)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH----HHTTCCTTSEEECCCC
T ss_pred CccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHH----HHhCcCCCeEEEEecC
Confidence 456788999999999999999999999999999999999999999999999999888776 4789999999999997
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhh------ccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCC
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNAS------KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa------~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 171 (437)
+ +.+++|++ +||+|+||||+++|+.|++.++ ++++|+++|||||||+||++|||++.|++.+++|+|.|+|
T Consensus 733 g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aG 812 (1026)
T 4f9i_A 733 GSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQG 812 (1026)
T ss_dssp HHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGG
T ss_pred cHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 6 68999998 8999999999999999999998 5789999999999999999999999999999999999999
Q ss_pred CccccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCC
Q 013765 172 QNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEG 251 (437)
Q Consensus 172 Q~C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~ 251 (437)
|.|+|++|+|||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++++||... .
T Consensus 813 Q~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~ 887 (1026)
T 4f9i_A 813 QKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----A 887 (1026)
T ss_dssp CSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----S
T ss_pred CCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----C
Confidence 99999999999999999999999999999999999999999999999999999999999999999 999998731 2
Q ss_pred CCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECC
Q 013765 252 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 331 (437)
Q Consensus 252 ~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~ 331 (437)
..|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+
T Consensus 888 ~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~ 967 (1026)
T 4f9i_A 888 GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINR 967 (1026)
T ss_dssp SSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESS
T ss_pred CCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcC
Confidence 24999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCccccCCCCCCC-cccHHHHHhcceeeEEEEcc
Q 013765 332 FASNYMCQSLPFGGVKDSGFGR-FAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 332 ~~~~~~~~~~PfGG~~~SG~G~-~~G~~~l~~ft~~k~v~~~~ 373 (437)
..++...+.+||||+|.||+|+ .+|+++|++|++.|+|.++.
T Consensus 968 ~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 968 NNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp CSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence 8766555679999999999995 68999999999999998865
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.8e-77 Score=665.10 Aligned_cols=341 Identities=23% Similarity=0.377 Sum_probs=319.7
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+|+
T Consensus 640 g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~----eAGlP~gvv~vV~G~ 715 (1001)
T 3haz_A 640 GESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH----EAGIPKSALYLVTGD 715 (1001)
T ss_dssp TEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH----HHTCCTTTEEECCCC
T ss_pred CCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH----HhCcCcCcEEEEecC
Confidence 4567899999999999999999999999999999999999999999999999998887764 679999999999998
Q ss_pred hhhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhcc---CCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccc
Q 013765 101 AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKT---LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCA 175 (437)
Q Consensus 101 ~~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~---~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~ 175 (437)
++.+++|++ +||+|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+
T Consensus 716 g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~ 795 (1001)
T 3haz_A 716 GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCS 795 (1001)
T ss_dssp HHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTT
T ss_pred chHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCC
Confidence 755999988 799999999999999999999864 899999999999999999999999999999999999999999
Q ss_pred cccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcc
Q 013765 176 GAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQ 255 (437)
Q Consensus 176 a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~ 255 (437)
|+++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +||.. +..|+
T Consensus 796 A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~-----~~~G~ 868 (1001)
T 3haz_A 796 ALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGP-----APEGC 868 (1001)
T ss_dssp CEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECC-----CCSSS
T ss_pred CCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ecccc-----CCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999888 88 88873 34599
Q ss_pred cccceeeecCCCCccccccccccCeeeEEEeCC--HHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCc
Q 013765 256 YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNT--DEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 333 (437)
Q Consensus 256 ~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~ 333 (437)
|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 869 fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~ 946 (1001)
T 3haz_A 869 FVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNM 946 (1001)
T ss_dssp CCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCS
T ss_pred EEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCC
Confidence 999999975 6889999999999999999986 899999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCccccCCCCCC-CcccHHHHHhcceeeEEEEccc
Q 013765 334 SNYMCQSLPFGGVKDSGFG-RFAGVEGLRACCLVKSVVEDRW 374 (437)
Q Consensus 334 ~~~~~~~~PfGG~~~SG~G-~~~G~~~l~~ft~~k~v~~~~~ 374 (437)
.+...+.+||||+|.||+| +.+|+++|++||+.|+|+.+..
T Consensus 947 ~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~~ 988 (1001)
T 3haz_A 947 IGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTA 988 (1001)
T ss_dssp CCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEECG
T ss_pred cCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECCc
Confidence 6665566899999999999 5678999999999999988653
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.9e-77 Score=630.27 Aligned_cols=333 Identities=17% Similarity=0.225 Sum_probs=309.5
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhH--HHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeC
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIF--NPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG 99 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~--~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g 99 (437)
...+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|
T Consensus 161 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g 240 (528)
T 3v4c_A 161 QEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQG 240 (528)
T ss_dssp CCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeC
Confidence 356889999999999999999999865 999999999999999999999999999999999999999999999999999
Q ss_pred Ch-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccC--CCccccCCCCCeEEEcCCC---CHHHHHHHHHHHHhhcCC
Q 013765 100 FA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDV---DVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 100 ~~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~--~pv~lElgGk~p~iV~~da---Dl~~aa~~i~~~~~~n~G 171 (437)
++ +.+++|++ +||+|+||||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+|
T Consensus 241 ~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~G 320 (528)
T 3v4c_A 241 GSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320 (528)
T ss_dssp CCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred CCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCC
Confidence 65 78899998 8999999999999999999999999 9999999999999999999 899999999999999999
Q ss_pred CccccccEEEEecc-cHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCC
Q 013765 172 QNCAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 250 (437)
Q Consensus 172 Q~C~a~~~v~V~~~-v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~ 250 (437)
|.|++++|||||++ ++|+|+++|++++++++.| +.+||++++.+.++++++++ ++|+++++||.
T Consensus 321 Q~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~------ 385 (528)
T 3v4c_A 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATE------ 385 (528)
T ss_dssp CCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCC------
T ss_pred CccccCcEEEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCC------
Confidence 99999999999997 9999999999999998754 57899999888888887763 47999999997
Q ss_pred CCCcccccceeeecCCCC---ccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecC--CHHHHHHHHHHhc--
Q 013765 251 GAVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG--SQHRAREIAAQIQ-- 323 (437)
Q Consensus 251 ~~~g~~~~Ptvl~~~~~~---~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~--d~~~~~~~~~~l~-- 323 (437)
..|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++
T Consensus 386 -~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~ 464 (528)
T 3v4c_A 386 -SSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERK 464 (528)
T ss_dssp -CCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred -cCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhc
Confidence 26899999999988887 899999999999999999999999999999999999999999 8899999999998
Q ss_pred cceEEECCCcccC-CCCCCCccc-cCCCCCCCcc--cHHHHHhcceeeEEE
Q 013765 324 CGVAAINDFASNY-MCQSLPFGG-VKDSGFGRFA--GVEGLRACCLVKSVV 370 (437)
Q Consensus 324 ~G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~~~--G~~~l~~ft~~k~v~ 370 (437)
+|+|+||++.+.. ..+.+|||| +|.||+|++| |++|+++||+.|++.
T Consensus 465 aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 465 AGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp EEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence 9999999975532 346799999 9999999987 999999999999754
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.9e-76 Score=621.69 Aligned_cols=330 Identities=17% Similarity=0.233 Sum_probs=305.4
Q ss_pred cceEEEeeceEEEEEcCCccchHhh--HHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 23 KAKVEFHPLGVVGAIVSWNYPFHNI--FNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 23 ~~~~~~~P~GVv~ii~p~N~P~~~~--~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
..+++++|+|||++|+|||||+.+. .+++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+
T Consensus 129 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~ 208 (510)
T 1ez0_A 129 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN 208 (510)
T ss_dssp CEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS
T ss_pred CceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3578999999999999999999985 49999999999999999999999999999999999999999999999999995
Q ss_pred -hhhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccC--CCccccCCCCCeEEEcCCCCHH--HHHHHHHHHHhhcCCCc
Q 013765 101 -AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTL--TPVTLELGGKDAFIVCDDVDVP--HVAQIAVRAALQSSGQN 173 (437)
Q Consensus 101 -~~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~--~pv~lElgGk~p~iV~~daDl~--~aa~~i~~~~~~n~GQ~ 173 (437)
.+.+++|++ .||+|+||||+.+|+.|++.+++++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.
T Consensus 209 ~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~ 288 (510)
T 1ez0_A 209 QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQF 288 (510)
T ss_dssp CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCC
T ss_pred cHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCC
Confidence 478899988 7999999999999999999999986 9999999999999999999999 99999999999999999
Q ss_pred cccccEEEEecc-cHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCC
Q 013765 174 CAGAERFYVHRD-IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEG 251 (437)
Q Consensus 174 C~a~~~v~V~~~-v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~-~~Ga~v~~gG~~~~~~~~ 251 (437)
|++++|||||++ ++|+|+++|+++++++++ ||++++.+.+++.+++++++ ++|+++++||.
T Consensus 289 C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~------- 351 (510)
T 1ez0_A 289 CTKPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA------- 351 (510)
T ss_dssp TTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-------
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-------
Confidence 999999999999 999999999999999864 57888889999999999998 47999999986
Q ss_pred CCcccccceeeecCCCC---ccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCH--HHHHHHHHHh--cc
Q 013765 252 AVDQYFPPTVIVNVNHT---MKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQ--HRAREIAAQI--QC 324 (437)
Q Consensus 252 ~~g~~~~Ptvl~~~~~~---~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~--~~~~~~~~~l--~~ 324 (437)
.|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++
T Consensus 352 -~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~a 430 (510)
T 1ez0_A 352 -ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIA 430 (510)
T ss_dssp -CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTE
T ss_pred -CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcc
Confidence 2899999999988777 99999999999999999999999999999999999999999987 7899999999 79
Q ss_pred ceEEECCCcccC-CCCCCCccc-cCCCCCCC--cccHHHHHhcceeeEEE
Q 013765 325 GVAAINDFASNY-MCQSLPFGG-VKDSGFGR--FAGVEGLRACCLVKSVV 370 (437)
Q Consensus 325 G~v~IN~~~~~~-~~~~~PfGG-~~~SG~G~--~~G~~~l~~ft~~k~v~ 370 (437)
|+|+||++.... ..+.+|||| +|.||+|+ .+|++||++|++.|++.
T Consensus 431 G~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 431 GRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred cEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 999999875432 234689999 79999985 48999999999988654
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=5.1e-72 Score=581.88 Aligned_cols=327 Identities=18% Similarity=0.236 Sum_probs=302.1
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++.++|+|+|++++|+|+
T Consensus 99 ~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~ 178 (464)
T 3k9d_A 99 EKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVP 178 (464)
T ss_dssp TTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSC
T ss_pred CceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred -hhhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCC-CCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 101 -AETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELG-GKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 101 -~~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElg-Gk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
.+.+++|++ +||+|+||||+.+ ++++++++||+ +|+| ||||+||++|||++.|++.|++++|.|+||.|++
T Consensus 179 ~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a 253 (464)
T 3k9d_A 179 TIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICAS 253 (464)
T ss_dssp CHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTS
T ss_pred CHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence 478999998 7999999999984 67788899999 8888 9999999999999999999999999999999999
Q ss_pred ccEEEEecccHHHHHHHHHHHh-------hccccCCCC-CCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCC
Q 013765 177 AERFYVHRDIYALFVSQVAKIV-------KSVSAGPPL-AGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 248 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~ 248 (437)
++|||||++++|+|+++|+++. +.+++|++. ++++++||+++.++++++.++++.++.+|+++++||..
T Consensus 254 ~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--- 330 (464)
T 3k9d_A 254 EQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--- 330 (464)
T ss_dssp CCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC---
T ss_pred CcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC---
Confidence 9999999999999999999986 456778887 67889999999999999999999888899999999861
Q ss_pred CCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHH----HHhhcCCCCceeEEecCCHHHHHHHHHHhcc
Q 013765 249 SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVV----KLANDSRYGLGCAVFSGSQHRAREIAAQIQC 324 (437)
Q Consensus 249 ~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai----~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~ 324 (437)
++++++++. ||+||||++|++|+|+|||| +++|+++|||++||||+|.++++++++++++
T Consensus 331 ---------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~ 394 (464)
T 3k9d_A 331 ---------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPV 394 (464)
T ss_dssp ---------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSE
T ss_pred ---------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCE
Confidence 456777765 89999999999999999997 7999999999999999999999999999999
Q ss_pred ceEEECCCccc-------CCCCCCCccccCCCCCCCcccHHHHHhcceeeEEEEc
Q 013765 325 GVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVED 372 (437)
Q Consensus 325 G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~~~ 372 (437)
|+|+||++..+ ...+.+|||| |.+|.|.++|..|+++|++.|+|.+.
T Consensus 395 G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 395 SRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred eEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 99999998653 2356799998 78999999999999999999999764
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.7e-71 Score=577.50 Aligned_cols=307 Identities=15% Similarity=0.159 Sum_probs=249.8
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHH----cCCCCCcEEEE
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA----VGAPENLVDVI 97 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~----aGlp~g~v~vv 97 (437)
...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.++++++.++|.+ +|+|+|++|+|
T Consensus 118 ~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv 195 (468)
T 1vlu_A 118 LTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLI 195 (468)
T ss_dssp EEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEEC
T ss_pred ceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEE
Confidence 45689999999999999999 9 999999999999999999999999999999999999999999 99999999999
Q ss_pred eCCh-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcc
Q 013765 98 TGFA-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC 174 (437)
Q Consensus 98 ~g~~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C 174 (437)
+ ++ +.++.|++ +||+|+||||+++|+.|++.+ +||+++|||||||+||++|||++.|++.+++++|.|+| .|
T Consensus 196 ~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C 270 (468)
T 1vlu_A 196 E-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GC 270 (468)
T ss_dssp C-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----C
T ss_pred C-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cC
Confidence 9 65 67888887 799999999999999999877 79999999999999999999999999999999999999 99
Q ss_pred ccccEEEEecccHHHHHHHHHHHhhcccc---CCCCCCCCCcccccCHHHHHHHHHH-HHHHHhcCCeEeecCCCCCCCC
Q 013765 175 AGAERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNL-VNDALDKGAEILARGSFGHLSE 250 (437)
Q Consensus 175 ~a~~~v~V~~~v~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~-i~~a~~~Ga~v~~gG~~~~~~~ 250 (437)
++++|||||+++ |+|+++|.++++++++ |+|.+ +++ +++++ ++++||.
T Consensus 271 ~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~------ 322 (468)
T 1vlu_A 271 NAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE------ 322 (468)
T ss_dssp CCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH------
T ss_pred CcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC------
Confidence 999999999999 9999999999999987 76532 345 66654 4666664
Q ss_pred CCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEEC
Q 013765 251 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAIN 330 (437)
Q Consensus 251 ~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN 330 (437)
| ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 323 ---g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN 395 (468)
T 1vlu_A 323 ---A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN 395 (468)
T ss_dssp ---H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEES
T ss_pred ---C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEc
Confidence 4 689987 788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCcc-----ccCCCCCCCcccHHHHHhcceeeEEEEcc
Q 013765 331 DFASNYMCQSLPFG-----GVKDSGFGRFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 331 ~~~~~~~~~~~PfG-----G~~~SG~G~~~G~~~l~~ft~~k~v~~~~ 373 (437)
++... .+.+||| |+|.||+|++ |++|+++||+.|+|+...
T Consensus 396 ~~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 396 ASTRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp SCGGG--CC-----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 97654 3458999 9999999999 999999999999998754
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.8e-70 Score=565.28 Aligned_cols=298 Identities=18% Similarity=0.195 Sum_probs=258.7
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...+++++|+|||++|+||| |+..+ +++++||++||+||+|||+.+|+++.++++++.++|.++| |+|++|+|+|+.
T Consensus 132 ~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~ 208 (463)
T 2h5g_A 132 LELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTRE 208 (463)
T ss_dssp EEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTC
T ss_pred ceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCH
Confidence 35689999999999999887 77766 8999999999999999999999999999999999888889 999999999955
Q ss_pred hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccE
Q 013765 102 ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAER 179 (437)
Q Consensus 102 ~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~ 179 (437)
+.++.|++ +||+|+||||+.+|+.|++.++ +||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|
T Consensus 209 ~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~r 285 (463)
T 2h5g_A 209 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALET 285 (463)
T ss_dssp CC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEE
T ss_pred HHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcE
Confidence 78899987 7999999999999999999988 999999999999999999999999999999999999 999999999
Q ss_pred EEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccccc
Q 013765 180 FYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPP 259 (437)
Q Consensus 180 v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~P 259 (437)
||||++++| ||+ + ++++++++++|++++.|+.. ...++|+
T Consensus 286 vlV~~~i~d-------------------------~p~-----~---~~~i~~~~~~Ga~v~~G~~~-----~~~g~~~-- 325 (463)
T 2h5g_A 286 LLIHRDLLR-------------------------TPL-----F---DQIIDMLRVEQVKIHAGPKF-----ASYLTFS-- 325 (463)
T ss_dssp EEEEGGGTT-------------------------SHH-----H---HHHHHHHHHTTCEEEECHHH-----HC-------
T ss_pred EEEeccccc-------------------------hHH-----H---HHHHHHHHhCCCEEEeCCcc-----cccCccC--
Confidence 999999998 232 2 33577788899999855431 1224332
Q ss_pred eeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCCCC
Q 013765 260 TVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQ 339 (437)
Q Consensus 260 tvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~ 339 (437)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+
T Consensus 326 ------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~--~~ 397 (463)
T 2h5g_A 326 ------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF--SD 397 (463)
T ss_dssp ----------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--CS
T ss_pred ------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC--CC
Confidence 5789999999999999999999999999999999999999999999999999999999999999997654 34
Q ss_pred CCCccccCCCCCC--Cc--ccHHHHHhcceeeEEEEcc
Q 013765 340 SLPFGGVKDSGFG--RF--AGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 340 ~~PfGG~~~SG~G--~~--~G~~~l~~ft~~k~v~~~~ 373 (437)
.+||||+|+||+| ++ +|++||++||+.|+|+.+.
T Consensus 398 ~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 398 GYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp TTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 6999999999999 76 9999999999999998864
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.8e-69 Score=558.17 Aligned_cols=301 Identities=20% Similarity=0.248 Sum_probs=260.7
Q ss_pred cccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 013765 21 HKKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGF 100 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~ 100 (437)
+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+|+
T Consensus 128 ~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 205 (444)
T 4ghk_A 128 GIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205 (444)
T ss_dssp SCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCC
T ss_pred CccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCC
Confidence 346789999999999999998 8 68999999999999999999999999999999999999999999999999999984
Q ss_pred -h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccc
Q 013765 101 -A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAG 176 (437)
Q Consensus 101 -~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a 176 (437)
. +.++.|.. +||+|+||||+.+|+.|++.+ +||+++|||||||+||++|||++.|++.+++++|.|+| .|++
T Consensus 206 ~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a 281 (444)
T 4ghk_A 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNT 281 (444)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCC
T ss_pred CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCc
Confidence 3 36777765 799999999999999999877 69999999999999999999999999999999999999 9999
Q ss_pred ccEEEEecccHHHHHHHHHHHhhcccc---CCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCC
Q 013765 177 AERFYVHRDIYALFVSQVAKIVKSVSA---GPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 253 (437)
Q Consensus 177 ~~~v~V~~~v~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~ 253 (437)
++|||||++++|+|+++|+++++++++ |+|. ..++++++. .
T Consensus 282 ~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~--------~----------- 325 (444)
T 4ghk_A 282 METLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG--------V----------- 325 (444)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT--------C-----------
T ss_pred CceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc--------c-----------
Confidence 999999999999999999999999987 6542 134555431 0
Q ss_pred cccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCc
Q 013765 254 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFA 333 (437)
Q Consensus 254 g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~ 333 (437)
| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.
T Consensus 326 G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~ 397 (444)
T 4ghk_A 326 G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNAST 397 (444)
T ss_dssp C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECG
T ss_pred C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCC
Confidence 1 12 356789999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCccccCCCCCC----CcccHHHHHhcceeeEEEEcc
Q 013765 334 SNYMCQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 334 ~~~~~~~~PfGG~~~SG~G----~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+ .+.+||||.+.||+| +++|++||++||+.|+|+...
T Consensus 398 ~~--~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 398 RF--ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp GG--CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred cc--CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 54 345899999999998 789999999999999998765
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.1e-68 Score=551.09 Aligned_cols=298 Identities=20% Similarity=0.228 Sum_probs=268.2
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeC-C
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITG-F 100 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g-~ 100 (437)
...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++.++++++.++|.++|+|+|++|+|+| +
T Consensus 117 ~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~ 194 (427)
T 1o20_A 117 LRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD 194 (427)
T ss_dssp CEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCC
T ss_pred ceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCC
Confidence 34688999999999999886 47899999999999999999999999999999999999999999999999999998 4
Q ss_pred h-hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccc
Q 013765 101 A-ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGA 177 (437)
Q Consensus 101 ~-~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~ 177 (437)
. +.++.|.. +||+|+||||+.+|+.|++.+ +||+++|||||||+||++|||++.|++.+++++|.|+| .|+++
T Consensus 195 ~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~ 270 (427)
T 1o20_A 195 RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAA 270 (427)
T ss_dssp THHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSE
T ss_pred hHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCc
Confidence 4 46777775 799999999999999999988 59999999999999999999999999999999999999 99999
Q ss_pred cEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCcccc
Q 013765 178 ERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 257 (437)
Q Consensus 178 ~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 257 (437)
+|||||++++|+|+++|++++++++++ +.||.. ..+ |+
T Consensus 271 ~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~------~~~-~~ 308 (427)
T 1o20_A 271 EKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEK------TRE-IV 308 (427)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHH------HHH-HS
T ss_pred cEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChh------hhh-hC
Confidence 999999999999999999999987642 123321 012 33
Q ss_pred cceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhccceEEECCCcccCC
Q 013765 258 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYM 337 (437)
Q Consensus 258 ~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~~~~~~~ 337 (437)
||| ++.+|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++...
T Consensus 309 -Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~-- 382 (427)
T 1o20_A 309 -PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF-- 382 (427)
T ss_dssp -TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG--
T ss_pred -Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc--
Confidence 886 34578999999999999999999999999999999999999999999999999999999999999997553
Q ss_pred CCCCCccccCCCCCC----CcccHHHHHhcceeeEEEEcc
Q 013765 338 CQSLPFGGVKDSGFG----RFAGVEGLRACCLVKSVVEDR 373 (437)
Q Consensus 338 ~~~~PfGG~~~SG~G----~~~G~~~l~~ft~~k~v~~~~ 373 (437)
.+.+||||.|.||+| +++|++||++||+.|+|+...
T Consensus 383 ~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 383 TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 345899999999997 478999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1e-65 Score=532.82 Aligned_cols=321 Identities=18% Similarity=0.236 Sum_probs=270.5
Q ss_pred ccceEEEeeceEEEEEcCCccchHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEeCCh
Q 013765 22 KKAKVEFHPLGVVGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVITGFA 101 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~N~P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~g~~ 101 (437)
...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.+++.++|+|+|++|+|+|++
T Consensus 95 ~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~ 174 (452)
T 3my7_A 95 LGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPS 174 (452)
T ss_dssp --CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCC
T ss_pred CceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999954
Q ss_pred -hhHHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCcccccc
Q 013765 102 -ETGEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE 178 (437)
Q Consensus 102 -~~~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~ 178 (437)
+.+++|++ +||+|+||||+.+ ++++++++||+++|+|||||+||++|||++.|++.|++++|.|+||.|++++
T Consensus 175 ~~~~~~L~~~p~v~~V~fTGs~~~----~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~ 250 (452)
T 3my7_A 175 VELSNALMKHDDIALILATGGPGM----VKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQ 250 (452)
T ss_dssp HHHHHHHHHCTTCCEEEECSCHHH----HHHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEE
T ss_pred HHHHHHHHhCCCccEEEEECcHHH----HHHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCc
Confidence 88999998 8999999999985 4567788999999999999999999999999999999999999999999999
Q ss_pred EEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecCCCCCCCCCCCccccc
Q 013765 179 RFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 258 (437)
Q Consensus 179 ~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~ 258 (437)
+||||+++||+|+++|+++ +||+++++++++++++++++...|+++ .||.... .....|+|++
T Consensus 251 rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~-~~~~~G~~v~ 313 (452)
T 3my7_A 251 AVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATA-IAEMAGVKVP 313 (452)
T ss_dssp EEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHH-HHHHHTCCCC
T ss_pred EEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccch-hHHhCCceeC
Confidence 9999999999999999874 389999999999999998766677776 4664210 0013589999
Q ss_pred cee-------eecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCC----CCceeEEecCCHHHHHH---HHHHhcc
Q 013765 259 PTV-------IVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR----YGLGCAVFSGSQHRARE---IAAQIQC 324 (437)
Q Consensus 259 Ptv-------l~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~----~gL~~sv~s~d~~~~~~---~~~~l~~ 324 (437)
||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||++||||+|.+++++ +++++++
T Consensus 314 pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~ 392 (452)
T 3my7_A 314 ADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKT 392 (452)
T ss_dssp TTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCC
T ss_pred CCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCE
Confidence 998 778899999876 89999999999999999999999985 99999999999877777 9999999
Q ss_pred ceEEECCCcccCCCCCCCccccCCC-----------CCCCcccH-----HHHHhcceeeEEEEc
Q 013765 325 GVAAINDFASNYMCQSLPFGGVKDS-----------GFGRFAGV-----EGLRACCLVKSVVED 372 (437)
Q Consensus 325 G~v~IN~~~~~~~~~~~PfGG~~~S-----------G~G~~~G~-----~~l~~ft~~k~v~~~ 372 (437)
|+|+||++ .||||.|.. |+|.++|. -+.+++.+.|+|.+.
T Consensus 393 G~V~VN~~--------~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 393 ARILINIP--------TTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp SEEEESCC--------CC----------------------------CCCCCGGGGEEEEEEECC
T ss_pred EEEEECCC--------CCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEee
Confidence 99999985 255555431 44444433 355666777777653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=95.89 E-value=1.6 Score=43.53 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=141.2
Q ss_pred cccceEEEeeceEEEEEcCCc---cchHhhHHHHHHHHhcCCe--EEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEE
Q 013765 21 HKKAKVEFHPLGVVGAIVSWN---YPFHNIFNPMLAAVFSGNG--IVIKVSENASWSGCFYFRIIQAALAAVGAPENLVD 95 (437)
Q Consensus 21 ~~~~~~~~~P~GVv~ii~p~N---~P~~~~~~~l~~ALaaGN~--VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~ 95 (437)
+.....++.|+--|++-.|.- || ++++...+||-.||+. |+.-|.+........|+ +.+.+|..+
T Consensus 120 G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~-----AA~l~Gv~e---- 189 (423)
T 4gic_A 120 GTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLA-----AAYISGVDR---- 189 (423)
T ss_dssp SCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHH-----HHHHHTCCE----
T ss_pred CCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHH-----HHHhcCCcE----
Confidence 344567899999999999954 65 4456667899999986 34445432111111121 123466754
Q ss_pred EEe-CChhhHHHHHh------ccCEEEEeCCHHHHHHHHHHhhccCCCccccC-CCCCeEEE--cCCCCHHHHHHHHHHH
Q 013765 96 VIT-GFAETGEALVS------SVDKIIFVGSPGVGRMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 165 (437)
Q Consensus 96 vv~-g~~~~~~~L~~------~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lEl-gGk~p~iV--~~daDl~~aa~~i~~~ 165 (437)
+.. |+.+.-.+|.- +||+|+=.|..=+... +..-. ..|-..+ -|.+=++| ++++|.+..|..++.-
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~--g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF--GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB--TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc--CCcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 223 43444445542 8999998888755321 11111 1222222 24444333 3459999988888765
Q ss_pred HhhcCCCccccccEEEEecc--cHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 013765 166 ALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 243 (437)
Q Consensus 166 ~~~n~GQ~C~a~~~v~V~~~--v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG 243 (437)
+=+.. .+ +-++|..+ +.++..+++.+.++.+. ..+...+.++. .|
T Consensus 266 AEHd~----~a-~~iLvT~s~~la~~V~~~i~~~l~~l~------------------r~~i~~~sl~~---~g------- 312 (423)
T 4gic_A 266 AEHDE----DA-QAILISPDAAHLEAVQASIERLLPGME------------------RAEVIRTSLER---RG------- 312 (423)
T ss_dssp HTTCT----TC-EEEEEESCHHHHHHHHHHHHHHGGGCT------------------THHHHHHHHHH---HC-------
T ss_pred hccCC----CC-eEEEEeCcHHHHHHHHHHHHHHHhhCc------------------cHHHHHHHHhc---Cc-------
Confidence 54432 22 34455443 33444444444444331 01111111110 01
Q ss_pred CCCCCCCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhc
Q 013765 244 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 323 (437)
Q Consensus 244 ~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~ 323 (437)
.++-++|++|+++++|..- +=..-|.++|.. .++.+++
T Consensus 313 --------------------------------------~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~ 350 (423)
T 4gic_A 313 --------------------------------------GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIR 350 (423)
T ss_dssp --------------------------------------EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCC
T ss_pred --------------------------------------eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCc
Confidence 3455799999999999842 236778888864 5777777
Q ss_pred -cceEEECCCccc-------CCCCCCCccccCCCCCCCcccHHHHHhcceeeEEE
Q 013765 324 -CGVAAINDFASN-------YMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370 (437)
Q Consensus 324 -~G~v~IN~~~~~-------~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~ 370 (437)
+|.|++..+... ..++.+|- +|..|+.+.-+.+.|...-++.
T Consensus 351 nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 351 NAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp CCSEEEEC----------------CCCC-----TTGGGTCCCCCGGGGEEEEEEE
T ss_pred EeceeecCCCCchhhhhcCcCCCccCCC-----CCcccccCCCCHHHeeeeeeEE
Confidence 899999765221 11233443 5666677766778887765543
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=94.31 E-value=4.8 Score=40.24 Aligned_cols=253 Identities=15% Similarity=0.164 Sum_probs=144.6
Q ss_pred ccceEEEeeceEEEEEcCC---ccchHhhHHHHHHHHhcCCeEEE--eCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEE
Q 013765 22 KKAKVEFHPLGVVGAIVSW---NYPFHNIFNPMLAAVFSGNGIVI--KVSENASWSGCFYFRIIQAALAAVGAPENLVDV 96 (437)
Q Consensus 22 ~~~~~~~~P~GVv~ii~p~---N~P~~~~~~~l~~ALaaGN~Vvl--Kps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~v 96 (437)
.....++.|+--|++-.|. -|| +++++..+||-.||+.=|+ -|....|.+ |+ +.+.+|..+ ++.
T Consensus 115 v~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~i---L~-----AA~l~Gv~e-Iy~- 183 (434)
T 1kae_A 115 VRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADEI---LY-----AAQLCGVQD-VFN- 183 (434)
T ss_dssp EEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHHH---HH-----HHHHTTCCE-EEE-
T ss_pred cEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHHH---HH-----HHHHcCCCE-Eee-
Confidence 3455688999999999997 355 4556667899999986444 444334432 11 123467765 222
Q ss_pred EeCChhhHHHHHh------ccCEEEEeCCHHHH--HHHHHHhhccCCCccccC-CCCCeEEE--cCCCCHHHHHHHHHHH
Q 013765 97 ITGFAETGEALVS------SVDKIIFVGSPGVG--RMIMRNASKTLTPVTLEL-GGKDAFIV--CDDVDVPHVAQIAVRA 165 (437)
Q Consensus 97 v~g~~~~~~~L~~------~vd~v~fTGs~~~g--~~v~~~aa~~~~pv~lEl-gGk~p~iV--~~daDl~~aa~~i~~~ 165 (437)
+ |+.+.-.+|.- +||+|+=.|..=+. |+....-. ..|-..+ -|.+=++| +++||.+..|..++.-
T Consensus 184 v-GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~---G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQ 259 (434)
T 1kae_A 184 V-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL---DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 259 (434)
T ss_dssp C-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCT---TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred c-ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhc---CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 2 44454455542 89999888887542 22211101 1222222 24444333 4469999988888765
Q ss_pred HhhcCCCccccccEEEEecc--cHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCeEeecC
Q 013765 166 ALQSSGQNCAGAERFYVHRD--IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 243 (437)
Q Consensus 166 ~~~n~GQ~C~a~~~v~V~~~--v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gG 243 (437)
+=+.. .+ +.++|-.+ +.++..+++.++++.+. + .+.++.+.
T Consensus 260 AEHd~----~a-~aiLvT~s~~la~~V~~ev~~ql~~lp----------------r------~~ia~~sl---------- 302 (434)
T 1kae_A 260 AEHGP----DS-QVILLTPAADMARRVAEAVERQLAELP----------------R------AETARQAL---------- 302 (434)
T ss_dssp HTTCT----TC-EEEEEESCHHHHHHHHHHHHHHHTTCT----------------T------HHHHHHHH----------
T ss_pred hccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHH----------
Confidence 54332 23 34455443 33444444444433331 0 01112111
Q ss_pred CCCCCCCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHhhcCCCCceeEEecCCHHHHHHHHHHhc
Q 013765 244 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAAQIQ 323 (437)
Q Consensus 244 ~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gL~~sv~s~d~~~~~~~~~~l~ 323 (437)
..- .|+-++|++||++++|..-. =..-|.++|.. .++.+++
T Consensus 303 ----------------------------------~~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp~---~~l~~I~ 343 (434)
T 1kae_A 303 ----------------------------------NAS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNAR---ELVDSIT 343 (434)
T ss_dssp ----------------------------------TTC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTHH---HHGGGCC
T ss_pred ----------------------------------HcC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCHH---HHHhhcC
Confidence 111 35568999999999998532 36788898864 5677777
Q ss_pred -cceEEECCCcc-------cCCCCCCCccccCCCCCCCcccHHHHHhcceeeEEE
Q 013765 324 -CGVAAINDFAS-------NYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 370 (437)
Q Consensus 324 -~G~v~IN~~~~-------~~~~~~~PfGG~~~SG~G~~~G~~~l~~ft~~k~v~ 370 (437)
+|.|++..+.. ...++-+|- +|+.|+.+.-+.+.|...-++.
T Consensus 344 nAGaIFlG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 344 SAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp SCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred cccchhcCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 89999987522 123445565 4556666666778888765543
No 55
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=79.16 E-value=4.8 Score=31.71 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHH-hcCCeEeecCCCCCCCCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHh
Q 013765 218 LLEHSEKLQNLVNDAL-DKGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 296 (437)
Q Consensus 218 ~~~~~~~~~~~i~~a~-~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 296 (437)
+++.+++..+....+. +.|++++..|. .|.++.+.. .+-+.|+.|+|.++|.++.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~-------------~~~~~eG~~-----------~~~~viieFpS~~aa~~~~ 71 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGG-------------SVTELEGTA-----------RARNVVIEFPSVQHAIDCY 71 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESC-------------CEEEEESCC-----------CSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECC-------------CceEEecCC-----------cCeEEEEECCCHHHHHHHH
Confidence 3444444444444433 34888888765 366665422 1367899999999999999
Q ss_pred hcCC
Q 013765 297 NDSR 300 (437)
Q Consensus 297 n~~~ 300 (437)
|+-+
T Consensus 72 ~s~~ 75 (99)
T 2fiu_A 72 NSPE 75 (99)
T ss_dssp HSHH
T ss_pred cCHH
Confidence 8643
No 56
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=59.12 E-value=23 Score=27.35 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHHHh
Q 013765 218 LLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLA 296 (437)
Q Consensus 218 ~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~~ 296 (437)
+++.+++..+....+.+ -|++++..| . +.++++.. -..-+.|+.|+|.+.|.++.
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~-------------~~~lEG~~----------~~~~~viieFps~~aa~a~y 70 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVKG-S-------------VEQLHGKF----------EHKAQVILEFPSREDAYNWY 70 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEE-E-------------CEEEESCC----------CCSEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEc-c-------------cccccCCC----------CCCeEEEEECCCHHHHHHHH
Confidence 45555555555555443 477887765 3 34444321 02467899999999999999
Q ss_pred hcCCC
Q 013765 297 NDSRY 301 (437)
Q Consensus 297 n~~~~ 301 (437)
|+-.|
T Consensus 71 ~SpeY 75 (94)
T 3lo3_A 71 HSEEY 75 (94)
T ss_dssp HSHHH
T ss_pred CCHHH
Confidence 87544
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=56.35 E-value=9.8 Score=32.52 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=73.7
Q ss_pred eec-eEEEEEcCCcc-chHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEe--CChhh
Q 013765 29 HPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAA-VGAPENLVDVIT--GFAET 103 (437)
Q Consensus 29 ~P~-GVv~ii~p~N~-P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~-aGlp~g~v~vv~--g~~~~ 103 (437)
.|. |-|+++..-+- +-.+.+.+-...+.+|-.++-- .-|+..+ .+ .|++-..++=++ |+.+.
T Consensus 8 ~p~~g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa~~L--------~e~~Gl~v~~v~k~~eGG~p~I 74 (152)
T 1b93_A 8 LPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTGNLI--------SRATGMNVNAMLSGPMGGDQQV 74 (152)
T ss_dssp ECSSCEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHHHHH--------HHHHCCCCEEECCGGGTHHHHH
T ss_pred CCCCCEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHHHHH--------HHHhCceeEEEEecCCCCCchH
Confidence 344 65665554443 4444555555667778888753 3344433 34 799876654333 22245
Q ss_pred HHHHHh-ccCEEEEeCC-------HHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCC
Q 013765 104 GEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 104 ~~~L~~-~vd~v~fTGs-------~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 171 (437)
++.+.+ +||.|+||=+ ..-+..|.+.|..+..|+.--+ ..|+.++.+.+++..
T Consensus 75 ~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 75 GALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp HHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred HHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 666666 9999999866 4577889999998888876544 456677777766664
No 58
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=50.29 E-value=8.5 Score=33.78 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=76.6
Q ss_pred EEEeec-eEEEEEcCCcc-chHhhHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEe--CCh
Q 013765 26 VEFHPL-GVVGAIVSWNY-PFHNIFNPMLAAVFSGNGIVIKVSENASWSGCFYFRIIQAALAAVGAPENLVDVIT--GFA 101 (437)
Q Consensus 26 ~~~~P~-GVv~ii~p~N~-P~~~~~~~l~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~~l~~aGlp~g~v~vv~--g~~ 101 (437)
.+.-|. |-|+++..-+- +-.+.+.+-...+.+|-.++- |.-|+.+|.+ ..|++-..++=++ |+.
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~L~e-------~~Gl~v~~v~k~~eGG~p 88 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGALLQE-------KLGLKVHRLKSGPLGGDQ 88 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHHHHH-------HHCCCCEECSCGGGTHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHHHHH-------HhCceeEEEeecCCCCCc
Confidence 344454 76666655444 455555555667777998875 4455544322 1799876554332 223
Q ss_pred hhHHHHHh-ccCEEEEeCC-------HHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCC
Q 013765 102 ETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSG 171 (437)
Q Consensus 102 ~~~~~L~~-~vd~v~fTGs-------~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~G 171 (437)
+.++.+.+ .||.|+||=+ ..-+..|.+.|..+.+|+..-+ ..|+.++.+.+++..
T Consensus 89 qI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 89 QIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred hHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 45666666 9999999866 2357889999998888876544 456677777777664
No 59
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=50.25 E-value=11 Score=31.55 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=41.9
Q ss_pred HHHcCCCCCcEEEEeC--C----hhhHHHHHh-ccCEEEEeCCH-----HHHHHHHHHhhccCCCccccC
Q 013765 84 LAAVGAPENLVDVITG--F----AETGEALVS-SVDKIIFVGSP-----GVGRMIMRNASKTLTPVTLEL 141 (437)
Q Consensus 84 l~~aGlp~g~v~vv~g--~----~~~~~~L~~-~vd~v~fTGs~-----~~g~~v~~~aa~~~~pv~lEl 141 (437)
|++.|+|-..++-++. + +...+.+.+ +||.|++|=+. .-+..|.+.|.++..|++.++
T Consensus 63 L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 63 LNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 3468998877765543 2 345666666 99999998655 367888999999888887554
No 60
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=47.22 E-value=30 Score=29.06 Aligned_cols=63 Identities=11% Similarity=0.135 Sum_probs=41.9
Q ss_pred ccCHHHHHHHHHHHHHHHh-cCCeEeecCCCCCCCCCCCcccccceeeecCCCCccccccccccCeeeEEEeCCHHHHHH
Q 013765 216 LCLLEHSEKLQNLVNDALD-KGAEILARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVK 294 (437)
Q Consensus 216 li~~~~~~~~~~~i~~a~~-~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 294 (437)
+.+++.+++..+....+.+ -|++++..|. .+.++.+... |.+ .-+.|+.|.|.+.|.+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~-------------~~~~lEG~~~-------e~~-~~~viieFPS~~aa~a 103 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQ-------------FELMLIGPQD-------EHW-DHVFIAEYPSVAAFVE 103 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEE-------------EEEEEESCTT-------CCC-SEEEEEEESCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecC-------------CceeEECCCC-------CCC-CeEEEEECCCHHHHHH
Confidence 5566777777766665543 4888887665 2445554221 111 4578999999999999
Q ss_pred HhhcC
Q 013765 295 LANDS 299 (437)
Q Consensus 295 ~~n~~ 299 (437)
+.++-
T Consensus 104 ~y~Sp 108 (143)
T 3hhl_A 104 MIRDP 108 (143)
T ss_dssp HHHCH
T ss_pred HHcCH
Confidence 98864
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=38.38 E-value=8.3 Score=32.26 Aligned_cols=55 Identities=13% Similarity=0.127 Sum_probs=38.4
Q ss_pred cCCCCCcEEEEe-C-ChhhHHHHHh-ccCEEEEeCC-------HHHHHHHHHHhhccCCCccccC
Q 013765 87 VGAPENLVDVIT-G-FAETGEALVS-SVDKIIFVGS-------PGVGRMIMRNASKTLTPVTLEL 141 (437)
Q Consensus 87 aGlp~g~v~vv~-g-~~~~~~~L~~-~vd~v~fTGs-------~~~g~~v~~~aa~~~~pv~lEl 141 (437)
.|++-..++=++ | +...++.+.+ ++|.|+||=+ ..-+..|.+.|..+..|+.--+
T Consensus 48 ~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l 112 (134)
T 2xw6_A 48 TGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNP 112 (134)
T ss_dssp HCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSH
T ss_pred hCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCH
Confidence 799876665444 3 2356677777 9999999976 2345778888888877765433
No 62
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=38.29 E-value=1.3e+02 Score=28.14 Aligned_cols=95 Identities=11% Similarity=0.028 Sum_probs=64.8
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCH-HHH-HHHHHHHHHHHHHcCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCCH---
Q 013765 48 FNPMLAAVFSGNGIVIKVSENAS-WSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP--- 120 (437)
Q Consensus 48 ~~~l~~ALaaGN~VvlKps~~~p-~~~-~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs~--- 120 (437)
-.-+-+|=..+.+||+--|+.+- +.+ ..++.++..+.+++++|- ++.+=+|.. +....-++ .+.-|+|-||.
T Consensus 32 ~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPV-alHlDHg~~~e~i~~ai~~GFtSVMiDgS~lp~ 110 (286)
T 1gvf_A 32 QAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPL-ALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPF 110 (286)
T ss_dssp HHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCB-EEEEEEECCHHHHHHHHHTTCCEEEECCTTSCH
T ss_pred HHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcE-EEEcCCCCCHHHHHHHHHcCCCeEEECCCCCCH
Confidence 33344566778899999998753 222 446667777777788773 455555643 44444445 99999999998
Q ss_pred ----HHHHHHHHHhhccCCCccccCCC
Q 013765 121 ----GVGRMIMRNASKTLTPVTLELGG 143 (437)
Q Consensus 121 ----~~g~~v~~~aa~~~~pv~lElgG 143 (437)
+.-+.+.+.|.+....|=.|+|-
T Consensus 111 eeNi~~Tk~vv~~ah~~gvsVEaElG~ 137 (286)
T 1gvf_A 111 AENVKLVKSVVDFCHSQDCSVEAELGR 137 (286)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEEee
Confidence 34566777777777888888873
No 63
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=28.16 E-value=1.6e+02 Score=27.62 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=60.8
Q ss_pred hHHHHHHHHhcCCeEEEeCCCCCHHH--H-HHHHHHHHHHHH--HcCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCC
Q 013765 47 IFNPMLAAVFSGNGIVIKVSENASWS--G-CFYFRIIQAALA--AVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGS 119 (437)
Q Consensus 47 ~~~~l~~ALaaGN~VvlKps~~~p~~--~-~~l~~~~~~~l~--~aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs 119 (437)
+-.-+-+|=..+-+||+--|+.+-.- . ..++.++..+.+ .+.+|- ++.+=+|.. +....-++ .+.-|+|-||
T Consensus 34 ~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPV-alHlDHg~~~e~i~~ai~~GFtSVMiDgS 112 (288)
T 3q94_A 34 TQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPV-AIHLDHGSSFEKCKEAIDAGFTSVMIDAS 112 (288)
T ss_dssp HHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCE-EEEEEEECSHHHHHHHHHHTCSEEEECCT
T ss_pred HHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcE-EEECCCCCCHHHHHHHHHcCCCeEEEeCC
Confidence 33344567778899999887644221 2 235556655555 566663 455555533 44444445 9999999999
Q ss_pred H-------HHHHHHHHHhhccCCCccccCC
Q 013765 120 P-------GVGRMIMRNASKTLTPVTLELG 142 (437)
Q Consensus 120 ~-------~~g~~v~~~aa~~~~pv~lElg 142 (437)
. +.-+.+.+.|.+....|=.|+|
T Consensus 113 ~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG 142 (288)
T 3q94_A 113 HHPFEENVETTKKVVEYAHARNVSVEAELG 142 (288)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 8 3456677777777777778887
No 64
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.29 E-value=26 Score=30.53 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=39.2
Q ss_pred cccccCeeeEEEeCCHHHHHHHh----hcCCCCceeEEecCCHHHHHHHHHHh
Q 013765 274 EEAFGPIMPIMKFNTDEEVVKLA----NDSRYGLGCAVFSGSQHRAREIAAQI 322 (437)
Q Consensus 274 eE~FGPvl~v~~~~~~~eai~~~----n~~~~gL~~sv~s~d~~~~~~~~~~l 322 (437)
||-||+..+..--.+.+||++.+ .....-|-.|+++......+.+.+.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~ 77 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQM 77 (178)
T ss_dssp HHHHCSCCCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHT
T ss_pred HHHhCCCCCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHh
Confidence 67788877777667999999999 88888899999998766666666554
No 65
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=25.45 E-value=2.5e+02 Score=22.50 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=21.9
Q ss_pred cccccCeeeEEEeCCHHHHHHHhhcCCCC
Q 013765 274 EEAFGPIMPIMKFNTDEEVVKLANDSRYG 302 (437)
Q Consensus 274 eE~FGPvl~v~~~~~~~eai~~~n~~~~g 302 (437)
.|..|= +.|+.++|.|||++++...++.
T Consensus 81 kE~lgG-~~iie~~s~deA~e~A~~~P~~ 108 (124)
T 1s7i_A 81 KEQLGG-FYLIEARDLNQALQIAAKIPPG 108 (124)
T ss_dssp SSEEEE-EEEEEESSHHHHHHHHTTCGGG
T ss_pred ccccee-EEEEEeCCHHHHHHHHHhCCcc
Confidence 455554 5677899999999999987764
No 66
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=24.85 E-value=2.1e+02 Score=24.14 Aligned_cols=96 Identities=19% Similarity=0.125 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCCCcE--EEEeCChh---hHHHHHh--ccCEEE-----EeCCHHHHHHHHHHhhcc
Q 013765 66 SENASWSGCFYFRIIQAALAAVGAPENLV--DVITGFAE---TGEALVS--SVDKII-----FVGSPGVGRMIMRNASKT 133 (437)
Q Consensus 66 s~~~p~~~~~l~~~~~~~l~~aGlp~g~v--~vv~g~~~---~~~~L~~--~vd~v~-----fTGs~~~g~~v~~~aa~~ 133 (437)
|+........+.+-..+.|.+.|..+.-+ --|+|.=| ..+.|.+ ++|.|+ ..|++.--+.|...+++.
T Consensus 20 arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIalG~VIrG~T~Hfd~Va~~vs~g 99 (154)
T 1hqk_A 20 SRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELARKEDIDAVIAIGVLIRGATPHFDYIASEVSKG 99 (154)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHTCTTCCEEEEEEEEECCSSTHHHHHHHHHHHH
T ss_pred eeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHHH
Confidence 33333333444444455667888876533 33667434 3456665 788765 457776666666666655
Q ss_pred CCCccccCCCCCe-EEEcCCCCHHHHHHHH
Q 013765 134 LTPVTLELGGKDA-FIVCDDVDVPHVAQIA 162 (437)
Q Consensus 134 ~~pv~lElgGk~p-~iV~~daDl~~aa~~i 162 (437)
+..+.|+.+=.-- .|+..+ +.+.|.++.
T Consensus 100 l~~v~l~~~vPV~~GVLT~~-~~eQA~~Ra 128 (154)
T 1hqk_A 100 LANLSLELRKPITFGVITAD-TLEQAIERA 128 (154)
T ss_dssp HHHHHHHHTSCEEEEEEEES-SHHHHHHHE
T ss_pred HHHHHhhcCCCEEEEEeCCC-CHHHHHHHh
Confidence 5444444431111 223333 677776554
No 67
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.47 E-value=2.5e+02 Score=26.63 Aligned_cols=87 Identities=13% Similarity=0.166 Sum_probs=53.5
Q ss_pred HHHHHh--ccCEEEEeCCHHHHHHHHHHhhccCCCccccCCCCCeEEEcCCCCHHHHHHHHHHHHhhcCCCccccccEEE
Q 013765 104 GEALVS--SVDKIIFVGSPGVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFY 181 (437)
Q Consensus 104 ~~~L~~--~vd~v~fTGs~~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daDl~~aa~~i~~~~~~n~GQ~C~a~~~v~ 181 (437)
-+.|++ ++|.|+....+.....+...+.+..|+|.+|-.- ..+++.+- +++..+ ...|. .+.
T Consensus 80 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPl--------a~~~~ea~-~l~~~a-~~~g~------~l~ 143 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPG--------MTSFDQLA-KLRRVQ-AETGR------IFS 143 (361)
T ss_dssp HHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCS--------CSSHHHHH-HHHHHH-HTTCC------CEE
T ss_pred HHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCC--------CCCHHHHH-HHHHHH-HHcCC------EEE
Confidence 345555 7999999999999999999888887765555321 23555543 343332 23343 223
Q ss_pred E-ecccHH-HHHHHHHHHhhccccCCC
Q 013765 182 V-HRDIYA-LFVSQVAKIVKSVSAGPP 206 (437)
Q Consensus 182 V-~~~v~d-~f~~~l~~~~~~~~~g~~ 206 (437)
| +...++ ....++++.+++=.+|+.
T Consensus 144 v~~~~R~~~p~~~~~k~~i~~g~iG~i 170 (361)
T 3u3x_A 144 ILYSEHFESPATVKAGELVAAGAIGEV 170 (361)
T ss_dssp EECHHHHTCHHHHHHHHHHHTTTTSSE
T ss_pred EechHhhCCHHHHHHHHHHHcCCCCCe
Confidence 3 334454 667788887776555543
No 68
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=24.12 E-value=2.6e+02 Score=23.71 Aligned_cols=97 Identities=21% Similarity=0.225 Sum_probs=51.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcC-CCCCcEEE--EeCChh---hHHHHHh--ccCEEE-----EeCCHHHHHHHHHHhhc
Q 013765 66 SENASWSGCFYFRIIQAALAAVG-APENLVDV--ITGFAE---TGEALVS--SVDKII-----FVGSPGVGRMIMRNASK 132 (437)
Q Consensus 66 s~~~p~~~~~l~~~~~~~l~~aG-lp~g~v~v--v~g~~~---~~~~L~~--~vd~v~-----fTGs~~~g~~v~~~aa~ 132 (437)
|+........+.+-..+.|.+.| ..+.-+.+ |+|.=| ..+.|.+ ++|.|. ..|++.--+.|...+++
T Consensus 20 arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~ 99 (156)
T 3nq4_A 20 ARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGGTAHFEYVAGGASN 99 (156)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHHCSCSEEEEEEEEECCSSTHHHHHHHHHHH
T ss_pred eeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhcCCCCEEEEeeeeecCCchHHHHHHHHHHH
Confidence 33334434444444455667788 76554444 556433 3455654 688665 55777666666666665
Q ss_pred cCCCccccCCCCCeEEEcCCCCHHHHHHHH
Q 013765 133 TLTPVTLELGGKDAFIVCDDVDVPHVAQIA 162 (437)
Q Consensus 133 ~~~pv~lElgGk~p~iV~~daDl~~aa~~i 162 (437)
.+..+.|+.+=.--.-|.-.-+.+.|.++.
T Consensus 100 Gl~~v~L~~~vPV~~GVLT~~~~eQA~~Ra 129 (156)
T 3nq4_A 100 GLASVAQDSGVPVAFGVLTTESIEQAIERA 129 (156)
T ss_dssp HHHHHHHHHCCCEEEEEEEESCHHHHHHHB
T ss_pred HHHHHHhccCCCEEEEEeCCCCHHHHHHHh
Confidence 555555554321112222224677766654
No 69
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=23.60 E-value=91 Score=24.98 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=46.0
Q ss_pred HHHHHHhhcCCCcccc--ccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccc-------cCHHHHHHHHHHHHH
Q 013765 161 IAVRAALQSSGQNCAG--AERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGAL-------CLLEHSEKLQNLVND 231 (437)
Q Consensus 161 ~i~~~~~~n~GQ~C~a--~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl-------i~~~~~~~~~~~i~~ 231 (437)
..+.......+-.|.. ....+++.+.++++.+++.+.++.+.--.|...+..-..+ .++.. +..+++.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~---~~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARV---YQALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHH---HHHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHH---HHHHHHH
Confidence 3334444444444554 2344899999999999999999886555555444322222 23333 3456666
Q ss_pred HHhcCCeEeecC
Q 013765 232 ALDKGAEILARG 243 (437)
Q Consensus 232 a~~~Ga~v~~gG 243 (437)
..++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 666775444443
No 70
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=23.59 E-value=2.4e+02 Score=26.96 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=61.6
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCHH-HH-HHHHHHHHHHHHH-cCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCCH--
Q 013765 48 FNPMLAAVFSGNGIVIKVSENASW-SG-CFYFRIIQAALAA-VGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP-- 120 (437)
Q Consensus 48 ~~~l~~ALaaGN~VvlKps~~~p~-~~-~~l~~~~~~~l~~-aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs~-- 120 (437)
-.-+-+|=..+.+||+--|+.+-. .+ ..+..++..+.++ +++|- ++.+=+|.. +....-++ .+.-|+|-||.
T Consensus 32 ~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPV-alHlDHg~~~e~i~~ai~~GFtSVMiDgS~~p 110 (323)
T 2isw_A 32 QGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPI-CIHLDHGDTLESVKMAIDLGFSSVMIDASHHP 110 (323)
T ss_dssp HHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCE-EEEEEEECSHHHHHHHHHTTCSEEEECCTTSC
T ss_pred HHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCcE-EEECCCCCCHHHHHHHHHcCCCeEEecCCCCC
Confidence 334455677789999988875421 11 2344555555555 56663 455555644 44444455 99999999997
Q ss_pred -----HHHHHHHHHhhccCCCccccCCC
Q 013765 121 -----GVGRMIMRNASKTLTPVTLELGG 143 (437)
Q Consensus 121 -----~~g~~v~~~aa~~~~pv~lElgG 143 (437)
+.-+.+.+.|.+....|=.|||-
T Consensus 111 ~eENi~~Tk~vv~~ah~~gvsVEaELG~ 138 (323)
T 2isw_A 111 FDENVRITKEVVAYAHARSVSVEAELGT 138 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 34566777787777788888874
No 71
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=23.27 E-value=2.6e+02 Score=26.47 Aligned_cols=94 Identities=18% Similarity=0.160 Sum_probs=58.7
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCHH-HH-HHHHHHHHHHHHH-cCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCCH--
Q 013765 48 FNPMLAAVFSGNGIVIKVSENASW-SG-CFYFRIIQAALAA-VGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP-- 120 (437)
Q Consensus 48 ~~~l~~ALaaGN~VvlKps~~~p~-~~-~~l~~~~~~~l~~-aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs~-- 120 (437)
-.-+-+|=..+-+||+--|+.+-. .. ..+..++..+.++ +++|- ++.+=+|.. +....-++ .+.-|+|-||.
T Consensus 31 ~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPV-alHLDHg~~~e~~~~ai~~GFtSVMiDgS~~p 109 (307)
T 3n9r_A 31 NAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPV-ALHLDHGTTFESCEKAVKAGFTSVMIDASHHA 109 (307)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCE-EEEEEEECSHHHHHHHHHHTCSEEEECCTTSC
T ss_pred HHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcE-EEECCCCCCHHHHHHHHHhCCCcEEEECCCCC
Confidence 334456777889999988865422 22 2344444444444 56663 455555543 43333344 99999999997
Q ss_pred -----HHHHHHHHHhhccCCCccccCC
Q 013765 121 -----GVGRMIMRNASKTLTPVTLELG 142 (437)
Q Consensus 121 -----~~g~~v~~~aa~~~~pv~lElg 142 (437)
+.-+.+.+.|.+....|=.|||
T Consensus 110 ~eeNi~~Tk~vv~~ah~~gvsVEaELG 136 (307)
T 3n9r_A 110 FEENLELTSKVVKMAHNAGVSVEAELG 136 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 3456677777777777777876
No 72
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.09 E-value=51 Score=28.53 Aligned_cols=41 Identities=22% Similarity=0.131 Sum_probs=27.0
Q ss_pred HHHHcCCCCCcEEEEeCChh-hHHHHHh---c--cCEEEEeCCHHHH
Q 013765 83 ALAAVGAPENLVDVITGFAE-TGEALVS---S--VDKIIFVGSPGVG 123 (437)
Q Consensus 83 ~l~~aGlp~g~v~vv~g~~~-~~~~L~~---~--vd~v~fTGs~~~g 123 (437)
.|.+.|+..-...++.-+.+ ..++|.+ + .|.|+.||++..+
T Consensus 48 ~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 48 LLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred HHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 34567886655666765543 4445543 4 8999999998654
No 73
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=22.86 E-value=1.6e+02 Score=27.50 Aligned_cols=69 Identities=10% Similarity=0.141 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCCH-HHHHHHHHHhhccCCCccccCCCCCeEEEcCCCC
Q 013765 78 RIIQAALAAVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP-GVGRMIMRNASKTLTPVTLELGGKDAFIVCDDVD 154 (437)
Q Consensus 78 ~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs~-~~g~~v~~~aa~~~~pv~lElgGk~p~iV~~daD 154 (437)
+.+++.++++|+..+-+.++.|+. ++...+.. .+|.|++=+.. ..-....+...+.++| ..+||.+|..
T Consensus 175 ~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~p--------GGiIv~DD~~ 246 (282)
T 2wk1_A 175 EEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSV--------GGYVIVDDYM 246 (282)
T ss_dssp HHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEE--------EEEEEESSCT
T ss_pred HHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCC--------CEEEEEcCCC
Confidence 456777889999877899999986 33333333 78888888865 2223445555555433 3378888863
No 74
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=22.04 E-value=3e+02 Score=23.25 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCCCc-EEEEeCChh---hHHHHHh--ccCEEEE-----eCCHHHHHHHHHHhhccC
Q 013765 66 SENASWSGCFYFRIIQAALAAVGAPENL-VDVITGFAE---TGEALVS--SVDKIIF-----VGSPGVGRMIMRNASKTL 134 (437)
Q Consensus 66 s~~~p~~~~~l~~~~~~~l~~aGlp~g~-v~vv~g~~~---~~~~L~~--~vd~v~f-----TGs~~~g~~v~~~aa~~~ 134 (437)
|+........+.+-..+.|.+.|...+. +--|+|.=| ..+.|.+ ++|.|.- .|++.--+.|...+++.+
T Consensus 21 arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~~~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl 100 (156)
T 1c2y_A 21 ARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGV 100 (156)
T ss_dssp ESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHHTTCCSEEEEEEECCCCSSTHHHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHhcCCCCEEEEecccccCCchHHHHHHHHHHHHH
Confidence 3333333333444445556778876222 223566433 3455654 7887764 466665566665555555
Q ss_pred CCccccCCCCCe-EEEcCCCCHHHHHHHH
Q 013765 135 TPVTLELGGKDA-FIVCDDVDVPHVAQIA 162 (437)
Q Consensus 135 ~pv~lElgGk~p-~iV~~daDl~~aa~~i 162 (437)
..+.|+.+=.-- .|+..+ +.+.|.++.
T Consensus 101 ~~v~L~~~vPV~~GVLT~~-~~eQA~~Ra 128 (156)
T 1c2y_A 101 LSAGLNSGVPCVFGVLTCD-NMDQAINRA 128 (156)
T ss_dssp HHHHHHHTSCEEEEEECCS-SHHHHHHHE
T ss_pred HHHHhhcCCCEEEEEeCCC-CHHHHHHHc
Confidence 444444432111 234444 777776654
No 75
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=21.76 E-value=4.6e+02 Score=26.15 Aligned_cols=142 Identities=12% Similarity=0.125 Sum_probs=78.9
Q ss_pred hcCCCccccccEEEEecccHHHHHHHHHHHhhccccCCCCCCCCCcccccCHHHHHHHHHHHHHHHh-----cCC-eEee
Q 013765 168 QSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-----KGA-EILA 241 (437)
Q Consensus 168 ~n~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~-----~Ga-~v~~ 241 (437)
.|+|+ |.-+. ...|.+++.+.-.. .+..|...++..+++.+++.-.+. .|- .+-.
T Consensus 15 ~nCg~-CG~~~--------C~~fA~ai~~G~a~----------~~~Cp~~~~~~~~~la~~lappI~~V~iG~G~~~v~i 75 (446)
T 4djd_C 15 KNCGE-CGTPT--------CLAFAMNLASGKAS----------LDSCPYVSDAAREALDAAAAPPIAKVVLGAGPTAVEM 75 (446)
T ss_dssp CCCCT-TSSSS--------HHHHHHHHHHTCSC----------GGGCSCSCHHHHHHHHHTTSCSSCEEEESSTTSCEEE
T ss_pred CCCCC-CCccC--------HHHHHHHHHcCCCC----------cccCCCCcHHHHHHHHhhccCCceeEEecCCcEEEEE
Confidence 35666 65543 56777777762211 123344456666666655532211 121 3445
Q ss_pred cCCCCCCCCCCCcccccceeee-cCCCCcc---c-------------cccccccCeeeEEEeCC-----HHHHHHHhhcC
Q 013765 242 RGSFGHLSEGAVDQYFPPTVIV-NVNHTMK---L-------------MQEEAFGPIMPIMKFNT-----DEEVVKLANDS 299 (437)
Q Consensus 242 gG~~~~~~~~~~g~~~~Ptvl~-~~~~~~~---i-------------~~eE~FGPvl~v~~~~~-----~~eai~~~n~~ 299 (437)
||+..- ...++.|..|+.+. ++.++++ + .--|.+++=+..++..+ ...+++.+.+
T Consensus 76 GGEtvL--~rhE~tf~n~p~ia~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dpe~~~~vVk~V~e- 152 (446)
T 4djd_C 76 GDETEL--FRHDKRFYHETAIAIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDPAAFKAAVASVAA- 152 (446)
T ss_dssp ECCCCS--SGGGSCCCSCCEEEEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSSTHHHHHHHHHHHT-
T ss_pred CCeeeE--EeCCcCCCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCHHHHHHHHHHHHH-
Confidence 666321 22355666665543 3333321 1 12256677777777743 3444555544
Q ss_pred CCCceeEEecCCHHHHHHHHHHhccceEEECC
Q 013765 300 RYGLGCAVFSGSQHRAREIAAQIQCGVAAIND 331 (437)
Q Consensus 300 ~~gL~~sv~s~d~~~~~~~~~~l~~G~v~IN~ 331 (437)
...+-.+|.|.|.+.+++.++....+.-.||.
T Consensus 153 ~~dvPL~IDS~dpevleaALea~a~~~plI~s 184 (446)
T 4djd_C 153 ATQLNLVLMADDPDVLKEALAGVADRKPLLYA 184 (446)
T ss_dssp TCCSEEEEECSCHHHHHHHHGGGGGGCCEEEE
T ss_pred hCCCCEEEecCCHHHHHHHHHhhcCcCCeeEe
Confidence 34577899999999999988877666666664
No 76
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.88 E-value=1e+02 Score=26.64 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=27.3
Q ss_pred HHHHHcCCCCCcEEEEeCChh-hHHHHHh---ccCEEEEeCCHHH
Q 013765 82 AALAAVGAPENLVDVITGFAE-TGEALVS---SVDKIIFVGSPGV 122 (437)
Q Consensus 82 ~~l~~aGlp~g~v~vv~g~~~-~~~~L~~---~vd~v~fTGs~~~ 122 (437)
+.|.+.|+....+.+|.-+.+ ..++|.+ +.|.|+.||++..
T Consensus 30 ~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~ 74 (172)
T 3kbq_A 30 NFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGP 74 (172)
T ss_dssp HHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSS
T ss_pred HHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcC
Confidence 345678887766677765543 4445543 7899999998754
No 77
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.07 E-value=3.3e+02 Score=25.72 Aligned_cols=93 Identities=19% Similarity=0.204 Sum_probs=59.9
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCH-HHH-HHHHHHHHHHHHHcCCCCCcEEEEeCCh-hhHHHHHh-ccCEEEEeCCH---
Q 013765 48 FNPMLAAVFSGNGIVIKVSENAS-WSG-CFYFRIIQAALAAVGAPENLVDVITGFA-ETGEALVS-SVDKIIFVGSP--- 120 (437)
Q Consensus 48 ~~~l~~ALaaGN~VvlKps~~~p-~~~-~~l~~~~~~~l~~aGlp~g~v~vv~g~~-~~~~~L~~-~vd~v~fTGs~--- 120 (437)
-.-+-+|=..+.+||+--|+.+- +.+ ..+..++..+.+ +.+|- ++.+=+|.. +....-++ .+.-|+|-||.
T Consensus 31 ~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~-~~VPV-alHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~ 108 (305)
T 1rvg_A 31 QAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE-ARVPV-AVHLDHGSSYESVLRALRAGFTSVMIDKSHEDF 108 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH-CSSCE-EEEEEEECSHHHHHHHHHTTCSEEEECCTTSCH
T ss_pred HHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh-CCCcE-EEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCH
Confidence 33445567778999999887653 232 345556655544 65553 445444543 33333344 99999999998
Q ss_pred ----HHHHHHHHHhhccCCCccccCC
Q 013765 121 ----GVGRMIMRNASKTLTPVTLELG 142 (437)
Q Consensus 121 ----~~g~~v~~~aa~~~~pv~lElg 142 (437)
+.-+.+.+.|.+....|=.|||
T Consensus 109 eENi~~Tk~vv~~ah~~gvsVEaELG 134 (305)
T 1rvg_A 109 ETNVRETRRVVEAAHAVGVTVEAELG 134 (305)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEEe
Confidence 3456677777777788888887
Done!