Query 013771
Match_columns 436
No_of_seqs 153 out of 1224
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:48:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 5.9E-81 2E-85 633.1 40.3 408 5-423 3-421 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 4E-79 1.4E-83 622.9 42.9 396 2-409 3-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 4.4E-72 1.5E-76 573.6 35.8 401 1-415 1-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 5.3E-72 1.8E-76 573.0 33.0 399 7-415 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 6.9E-65 2.4E-69 520.1 36.9 387 27-419 4-449 (451)
6 1q9j_A PAPA5, polyketide synth 99.0 6.6E-08 2.3E-12 96.5 24.8 271 26-322 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.5 4.3E-05 1.5E-09 78.4 25.7 265 26-322 95-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.5 1.2E-05 4E-10 80.5 20.6 238 60-322 34-305 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.3 5.8E-05 2E-09 76.9 22.5 269 26-322 12-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.3 0.00049 1.7E-08 69.2 27.6 274 26-323 16-337 (466)
11 2vsq_A Surfactin synthetase su 98.0 0.001 3.4E-08 76.0 25.7 241 60-322 48-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.7 0.0013 4.6E-08 67.2 17.7 174 148-321 177-399 (519)
13 3cla_A Type III chloramphenico 76.9 2 6.8E-05 38.2 4.0 44 134-177 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 75.8 2.2 7.6E-05 38.0 4.0 43 134-176 172-216 (217)
15 1q23_A Chloramphenicol acetylt 75.7 2.2 7.7E-05 38.0 4.0 44 134-177 168-213 (219)
16 3rqc_A Probable lipoamide acyl 72.8 2.5 8.4E-05 37.9 3.5 30 149-178 187-216 (224)
17 1scz_A E2, dihydrolipoamide su 72.3 3 0.0001 37.5 4.0 30 149-178 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 72.2 3 0.0001 37.8 4.0 30 149-178 208-237 (243)
19 3b8k_A PDCE2;, dihydrolipoylly 72.2 2.8 9.5E-05 37.9 3.8 30 149-178 204-233 (239)
20 2ii3_A Lipoamide acyltransfera 70.7 3.4 0.00012 37.9 4.0 30 149-178 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 66.7 4.6 0.00016 36.9 4.0 30 149-178 210-239 (256)
22 3l60_A Branched-chain alpha-ke 65.3 5.1 0.00018 36.4 4.0 30 149-178 205-234 (250)
23 1x93_A Hypothetical protein HP 49.9 21 0.00071 23.2 3.7 38 215-259 2-39 (55)
24 2k1o_A Putative; repressor, tr 48.9 32 0.0011 23.2 4.6 42 213-261 14-55 (66)
25 2xl1_A Arginine attenuator pep 47.2 11 0.00037 20.3 1.7 18 240-257 7-24 (26)
26 3dva_I Dihydrolipoyllysine-res 43.1 5.1 0.00017 39.6 0.0 30 149-178 391-420 (428)
27 2kke_A Uncharacterized protein 26.9 1.1E+02 0.0038 19.2 4.2 37 213-257 12-48 (53)
28 2xt6_A 2-oxoglutarate decarbox 24.5 53 0.0018 36.5 4.2 29 149-177 192-220 (1113)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.9e-81 Score=633.15 Aligned_cols=408 Identities=35% Similarity=0.560 Sum_probs=348.5
Q ss_pred ceEEEEeeeEeeCCCCCCCCCceecCCccccCCcccceeEEEEecCCCCC-CCchhHHHHHHHHHHHhhhcccCCCceec
Q 013771 5 LEVEILARETIKPSSPTPHNLRNFKLSLLDQIMPVEYTAAILFYSNNGHH-ADGAEMSQRLKAALPETLKNFYPFAGIIK 83 (436)
Q Consensus 5 ~~v~~~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 83 (436)
|+|+++++++|+|+.|||.+.+.++||+||+..++.|++.+|||+.++.. .+...+++.||+||+++|++||+|||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 88999999999999999876678999999998778999999999975431 13457899999999999999999999999
Q ss_pred CceeEEeCCCCcEEEEEEeccChhhhccC-CChhhhhcccCCccccCC----CCCCCeEEEEEEEEecCcEEEEeeeccc
Q 013771 84 DNVLVECNDNGAVFVEARANYPLSEVLQQ-HDHKLLREFLPIEIESTK----AGSGPLLLTQVTIFKCGGVAVGNCLSHK 158 (436)
Q Consensus 84 ~~~~i~~~~~gv~f~~a~~~~~l~~l~~~-p~~~~~~~l~P~~~~~~~----~~~~Pll~vQvt~f~cGG~~l~~~~~H~ 158 (436)
++++|+||++||.|++|+++++++|+... |+...++.|+|... ... ..+.|++.+|||+|+|||++||+++||.
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~ 161 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHK 161 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEEeeEE
Confidence 88999999999999999999999999765 66556778888762 221 3568999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHhcCCCCCCCCCCCccccc-ccccCC-CCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhcC
Q 013771 159 IADGCAASFLAKSWAATVLDPGNKAKVNTPEYVIA-ASLFPP-DDSLEPHADVTGQNYITKRFVFHASKIAQLKAKVTSA 236 (436)
Q Consensus 159 v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~P~~drr-~~l~~~-~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~ 236 (436)
++||.|+.+|+++||++|||. +.. ..|.+| | ..+.|+ ++.+.+ .+....++..++|+|++++|++||+.+.++
T Consensus 162 v~Dg~~~~~fl~~wa~~~rg~--~~~-~~P~~d-r~~~l~p~~~~~~~~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~ 236 (421)
T 2bgh_A 162 IADVLSLATFLNAWTATCRGE--TEI-VLPNFD-LAARHFPPVDNTPSP-ELVPDENVVMKRFVFDKEKIGALRAQASSA 236 (421)
T ss_dssp TCCHHHHHHHHHHHHHHHTTC--SCC-CCCBCS-HHHHHSCCCTTCCCC-CCCCCSSEEEEEEEECHHHHHHHHHHTC--
T ss_pred echHHHHHHHHHHHHHHhcCC--CCC-CCCccc-cccccCCCcccCCCC-ccCCccceEEEEEEECHHHHHHHHHHhhcc
Confidence 999999999999999999994 223 678999 6 556665 443222 233346789999999999999999999765
Q ss_pred CC-CCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCCCCCCcccccccceeeeecccc-ccHHHHHHH
Q 013771 237 SV-PKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKATQRE-IELQDLVHQ 314 (436)
Q Consensus 237 ~~-~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~e-~~L~~~A~~ 314 (436)
.. .++|++|+|+||+|+|++|||....++++.+.+.++||+|+|++||+|++||||++..+.+..++++ .+|+++|.+
T Consensus 237 ~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ 316 (421)
T 2bgh_A 237 SEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGP 316 (421)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGGHHH
T ss_pred CCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHHHHH
Confidence 33 6899999999999999999987543335789999999999999999999999999999998888876 899999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhcccCCcCCCCceEEEeccCCCCCCcccccccceeeeeccc-ccCcEEEEEEcCCCCeE
Q 013771 315 LRKGKDEFCKNGMQNILEKKSSLMHGVEGDAVDFYMYSDLSRLPMYDTDFGLGKPVWVTIPN-YMHNMIMLLSTRNGEGI 393 (436)
Q Consensus 315 Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~~~DFG~G~P~~v~~~~-~~~g~~~i~p~~~~~g~ 393 (436)
||+++++++++|++... ++.+..... ...+.+.+|||.++++|++|||||+|.++++.. +.+|.++++|+++++|+
T Consensus 317 ir~ai~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~~gi 393 (421)
T 2bgh_A 317 LRTSLEKTEDDHNHELL-KGMTCLYEL--EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGV 393 (421)
T ss_dssp HHHHTCCCSSCHHHHHH-HHHHHHHTS--CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTSSSE
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcc--CCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCCCeE
Confidence 99999999999999886 666543221 223469999999999999999999999999887 67899999999988899
Q ss_pred EEEEecCHHHHHHHhccHHHhcccCCCCCc
Q 013771 394 EALVSLSEEDMALFERDEELLAFADPNPSV 423 (436)
Q Consensus 394 ev~v~L~~~~m~~l~~D~e~~~~~~~~~~~ 423 (436)
||.|+|++++|++|++ ||.+|+++||++
T Consensus 394 ~v~v~L~~~~m~~f~~--e~~~~~~~~~~~ 421 (421)
T 2bgh_A 394 EAWLPMAEDEMAMLPV--ELLSLVDSDFSK 421 (421)
T ss_dssp EEEEEEEHHHHHHSCH--HHHTTBCCCCCC
T ss_pred EEEEEcCHHHHHHHHH--HHHHhhcCCCCC
Confidence 9999999999999998 999999999874
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=4e-79 Score=622.88 Aligned_cols=396 Identities=23% Similarity=0.345 Sum_probs=330.7
Q ss_pred CccceEEEEeeeEeeCCCCCCCCCceecCCccccCCcccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCce
Q 013771 2 VRALEVEILARETIKPSSPTPHNLRNFKLSLLDQIMPVEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGI 81 (436)
Q Consensus 2 ~~~~~v~~~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGr 81 (436)
|++|+|+++++++|+|+.|||. +.++||+||+.+++.|++.+|||+.+.. +....+++||+||+++|++|||||||
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGR 78 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGR 78 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCE
T ss_pred CCceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhcccccee
Confidence 5679999999999999999975 5799999999988899999999997543 23356899999999999999999999
Q ss_pred ec----CceeEEeCCCCcEEEEEEeccChhhhccCCChhhhhcccCCccccCCCCCCCeEEEEEEEEecCcEEEEeeecc
Q 013771 82 IK----DNVLVECNDNGAVFVEARANYPLSEVLQQHDHKLLREFLPIEIESTKAGSGPLLLTQVTIFKCGGVAVGNCLSH 157 (436)
Q Consensus 82 l~----~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H 157 (436)
|+ ++++|+||++||.|+||+++++++|+....+...+++|+|..+......+.|++.+|||+|+|||++||+++||
T Consensus 79 l~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H 158 (439)
T 4g22_A 79 LKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRH 158 (439)
T ss_dssp EEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECT
T ss_pred eeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeee
Confidence 97 47999999999999999999999999653223356778886544333356899999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHhcCCCCCCCCCCCcccccccccC---CCC-C------CCCCC-------CCCC-CCeEEEEE
Q 013771 158 KIADGCAASFLAKSWAATVLDPGNKAKVNTPEYVIAASLFP---PDD-S------LEPHA-------DVTG-QNYITKRF 219 (436)
Q Consensus 158 ~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~P~~drr~~l~~---~~~-~------~~~~~-------~~~~-~~~~~~~f 219 (436)
.++||.|+.+|+++||++|||. + ....|.+| |+.+.+ |.. . +.+.. +..+ .++..++|
T Consensus 159 ~v~Dg~~~~~Fl~~wa~~~rg~--~-~~~~P~~d-r~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 234 (439)
T 4g22_A 159 HAADGFSGLHFINSWSDMARGL--D-VTLPPFID-RTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIF 234 (439)
T ss_dssp TTCCHHHHHHHHHHHHHHHTTC--C-CSSCCBCC-GGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEE
T ss_pred ccCcHHHHHHHHHHHHHHhCCC--C-CCCCCccc-cccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEE
Confidence 9999999999999999999994 2 24678999 553321 110 0 11100 0112 56899999
Q ss_pred EeCHHHHHHHHHHhhcCC-CCCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCCCCCCccccccccee
Q 013771 220 VFHASKIAQLKAKVTSAS-VPKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFP 298 (436)
Q Consensus 220 ~f~~~~l~~Lk~~a~~~~-~~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~ 298 (436)
+|++++|++||+.+.++. ..++|++|+|+||+|+|++|||+..+ ++.+.+.++||+|+|++||+|++||||++..+.
T Consensus 235 ~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~ 312 (439)
T 4g22_A 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTAT 312 (439)
T ss_dssp EECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEEC
T ss_pred EECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehhh
Confidence 999999999999997653 46899999999999999999997643 578999999999999999999999999999999
Q ss_pred eeecccc---ccHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcccCC---c-----CCCCceEEEeccCCCCCCccccccc
Q 013771 299 AKATQRE---IELQDLVHQLRKGKDEFCKNGMQNILEKKSSLMHGV---E-----GDAVDFYMYSDLSRLPMYDTDFGLG 367 (436)
Q Consensus 299 ~~~~~~e---~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~tsw~~~~~~~~DFG~G 367 (436)
+..+++| .+|+++|.+||+++++++++|+++.+ +|++..... . .... .+++|||.++++|++|||||
T Consensus 313 ~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~vssw~r~~~y~~DFGwG 390 (439)
T 4g22_A 313 PIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSAL-DYLELQPDLKALVRGAHTFKCP-NLGITSWVRLPIHDADFGWG 390 (439)
T ss_dssp CEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHH-HHHHTCSCSTTCCCCHHHHCTT-CEEEEECTTSCTTCCCCSSC
T ss_pred cceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHH-HHHHhCccchhhcccCCcCcCC-cEEEeecCcCCccccccCCC
Confidence 9998887 79999999999999999999999998 898755321 1 1123 49999999999999999999
Q ss_pred ceeeeeccc-ccCcEEEEEEcCC-CCeEEEEEecCHHHHHHHhc
Q 013771 368 KPVWVTIPN-YMHNMIMLLSTRN-GEGIEALVSLSEEDMALFER 409 (436)
Q Consensus 368 ~P~~v~~~~-~~~g~~~i~p~~~-~~g~ev~v~L~~~~m~~l~~ 409 (436)
+|+++++.. +.+|.++++|+++ +||++|.|+|++++|++|++
T Consensus 391 kP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 391 RPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 999999877 6789999999865 45899999999999999987
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=4.4e-72 Score=573.62 Aligned_cols=401 Identities=21% Similarity=0.296 Sum_probs=317.0
Q ss_pred CCccceEEEEeeeEeeCCCCCCCCCceecCCccccCCc-ccceeEEEEecCCCCCCC--chhHHHHHHHHHHHhhhcccC
Q 013771 1 MVRALEVEILARETIKPSSPTPHNLRNFKLSLLDQIMP-VEYTAAILFYSNNGHHAD--GAEMSQRLKAALPETLKNFYP 77 (436)
Q Consensus 1 ~~~~~~v~~~~~~~V~P~~pt~~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~ 77 (436)
|.+..+|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.+... + .+.++++||+||+++|++||+
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~p 78 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITR-SQFTETVVPNIKHSLSITLKHFYP 78 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCH-HHHHHTHHHHHHHHHHHHHTTCGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCc-chhhHHHHHHHHHHHHHHhhhccc
Confidence 56678999999999999987544 37899999999754 5699999999875421 1 335789999999999999999
Q ss_pred CCceec--C----ceeEEeC-CCCcEEEEEEeccChhhhccC-C-ChhhhhcccCCccccC---CCCCCCeEEEEEEEEe
Q 013771 78 FAGIIK--D----NVLVECN-DNGAVFVEARANYPLSEVLQQ-H-DHKLLREFLPIEIEST---KAGSGPLLLTQVTIFK 145 (436)
Q Consensus 78 LaGrl~--~----~~~i~~~-~~gv~f~~a~~~~~l~~l~~~-p-~~~~~~~l~P~~~~~~---~~~~~Pll~vQvt~f~ 145 (436)
|||||+ + +++|+|| ++||.|++|+++.+++++... + +...++.|+|..+... +..+.|++.+|||+|+
T Consensus 79 lAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~ 158 (454)
T 2e1v_A 79 FVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFP 158 (454)
T ss_dssp GGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEET
T ss_pred cceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEec
Confidence 999997 2 6999999 599999999999999999653 2 3445677888654221 1133599999999999
Q ss_pred cCcEEEEeeecccccchhhHHHHHHHHHHHhc-CCCCC---CCCCCCcccccccccCCC-CCC----C---C------CC
Q 013771 146 CGGVAVGNCLSHKIADGCAASFLAKSWAATVL-DPGNK---AKVNTPEYVIAASLFPPD-DSL----E---P------HA 207 (436)
Q Consensus 146 cGG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~---~~~~~P~~drr~~l~~~~-~~~----~---~------~~ 207 (436)
|||++||+++||.++||.|+.+|+++||++|| |...+ .+...|.+| | .+..|. +.+ + . ..
T Consensus 159 cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~d-r-~l~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (454)
T 2e1v_A 159 NQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYD-R-IIKYPMLDEAYLKRAKVESFNEDYVTQ 236 (454)
T ss_dssp TTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCC-C-CCCCHHHHHHHHHHTTCTTHHHHCCCC
T ss_pred CCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCccc-c-cCCCCCcchHHHHhhhccccccccCcc
Confidence 99999999999999999999999999999999 73101 113568899 5 332111 000 0 0 01
Q ss_pred CC-CCCCeEEEEEEeCHHHHHHHHHHhhcCCC--CCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCC
Q 013771 208 DV-TGQNYITKRFVFHASKIAQLKAKVTSASV--PKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPP 284 (436)
Q Consensus 208 ~~-~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~--~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pp 284 (436)
.. .+.+...++|+|++++|++||+.+.++.. .++|+||+|+||+|+|++||| + ++.+.+.++||+|+|++||
T Consensus 237 ~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~pp 311 (454)
T 2e1v_A 237 SLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMKPP 311 (454)
T ss_dssp CCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSSSC
T ss_pred cCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccCCC
Confidence 11 23567899999999999999999976432 689999999999999999999 2 4789999999999999999
Q ss_pred CCCCcccccccceeeeecccc----ccHHHHHHHHHHHHHHHh----hhhHHH-HHHHHHhcccCCcCCCCceEEEeccC
Q 013771 285 LPDNCVGNFVGDFPAKATQRE----IELQDLVHQLRKGKDEFC----KNGMQN-ILEKKSSLMHGVEGDAVDFYMYSDLS 355 (436)
Q Consensus 285 lp~~Y~GN~v~~~~~~~~~~e----~~L~~~A~~Ir~ai~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~tsw~ 355 (436)
+|++||||++..+.+.++++| .+|+++|.+||+++++++ ++++++ .. +|++..+.+ ... ..+.+|||.
T Consensus 312 lP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~-~~~~vssw~ 388 (454)
T 2e1v_A 312 IPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDME-SFNDLVSEG-MPT-TMTWVSGTP 388 (454)
T ss_dssp CCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC------CHHHHHC-CCS-EEEEEECCT
T ss_pred CCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHH-HHHHHHHhh-cCC-ceEEEecCC
Confidence 999999999999998888875 689999999999999997 455665 44 676643322 222 359999999
Q ss_pred CCCCCcccccccceeeeeccc-ccCcEEEEEEcCCC-CeEEEEEecCHHHHHHHhccHHHhc
Q 013771 356 RLPMYDTDFGLGKPVWVTIPN-YMHNMIMLLSTRNG-EGIEALVSLSEEDMALFERDEELLA 415 (436)
Q Consensus 356 ~~~~~~~DFG~G~P~~v~~~~-~~~g~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~D~e~~~ 415 (436)
++++|++|||||+|.++++.. +.+|.++++|++++ ||++|.|+|++++|++|++ ||.+
T Consensus 389 ~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 389 KLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp TSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred CCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 999999999999999999877 67899999998765 4899999999999999965 6654
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.3e-72 Score=572.96 Aligned_cols=399 Identities=19% Similarity=0.270 Sum_probs=322.5
Q ss_pred EEEEeeeEeeCCCCCCCCCceecCCccccCCc-ccceeEEEEecCCCCCCC--chhHHHHHHHHHHHhhhcccCCCceec
Q 013771 7 VEILARETIKPSSPTPHNLRNFKLSLLDQIMP-VEYTAAILFYSNNGHHAD--GAEMSQRLKAALPETLKNFYPFAGIIK 83 (436)
Q Consensus 7 v~~~~~~~V~P~~pt~~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~~--~~~~~~~L~~sL~~~L~~~p~LaGrl~ 83 (436)
|+|+++++|+|+.|+++ .+.++||+||+.+. ..|++.+|||+.+... + .+.+++.||+||+++|++||+|||||+
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 79 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISR-PDFVQTIIPTLKDSLSLTLKYYLPLAGNVA 79 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCS-HHHHHTHHHHHHHHHHHHHTTSGGGGSCCE
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCC-chhHHHHHHHHHHHHHHHhhhccccCeeEE
Confidence 89999999999987544 37899999999754 4699999999876421 1 345789999999999999999999994
Q ss_pred ------CceeEEeC-CCCcEEEEEEeccChhhhccC--CChhhhhcccCCccccCC---CCCCCeEEEEEEEEecCcEEE
Q 013771 84 ------DNVLVECN-DNGAVFVEARANYPLSEVLQQ--HDHKLLREFLPIEIESTK---AGSGPLLLTQVTIFKCGGVAV 151 (436)
Q Consensus 84 ------~~~~i~~~-~~gv~f~~a~~~~~l~~l~~~--p~~~~~~~l~P~~~~~~~---~~~~Pll~vQvt~f~cGG~~l 151 (436)
++++|+|+ ++||.|++|+++.+++++... ++...++.|+|..+.... ..+.|++.+|||+|+|||++|
T Consensus 80 ~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~l 159 (453)
T 2xr7_A 80 CPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISI 159 (453)
T ss_dssp EESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEE
T ss_pred ccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEE
Confidence 37999999 599999999999999999752 234466778886542211 112899999999999999999
Q ss_pred EeeecccccchhhHHHHHHHHHHHhc-CCCC--CCCCCCCcccccccccCCCCC-----C-C---CCC-CC----CCCCe
Q 013771 152 GNCLSHKIADGCAASFLAKSWAATVL-DPGN--KAKVNTPEYVIAASLFPPDDS-----L-E---PHA-DV----TGQNY 214 (436)
Q Consensus 152 ~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~--~~~~~~P~~drr~~l~~~~~~-----~-~---~~~-~~----~~~~~ 214 (436)
|+++||.++||.|+.+|+++||++|| |... ......|.+| |+.+.+|.+. . + +.. .. ...++
T Consensus 160 g~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~d-r~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 160 GFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYD-RSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp EEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCC-CSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSC
T ss_pred EEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccc-cccccCCCCcchHHHHhccccCCccccccccCCCCc
Confidence 99999999999999999999999999 7410 0123568999 5655544321 0 0 110 11 23457
Q ss_pred EEEEEEeCHHHHHHHHHHhhcCCC--CCCChhHHHHHHHHHHHHHhhcCc--C-CCCceEEEEEEeccccccCCCCCCCc
Q 013771 215 ITKRFVFHASKIAQLKAKVTSASV--PKPTRVEAIVALIWKSTITASRSI--R-GFPRVSLTAHSMNLRRMVSPPLPDNC 289 (436)
Q Consensus 215 ~~~~f~f~~~~l~~Lk~~a~~~~~--~~~St~dal~A~lW~~~~rAr~~~--~-~~~~~~~l~~~vd~R~rl~pplp~~Y 289 (436)
..++|+|++++|++||+.+.++.. .++|+||+|+||+|+|++|||... . ++++.+.+.++||+|+|++||+|++|
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y 318 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSY 318 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTB
T ss_pred eEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCccc
Confidence 789999999999999999976432 689999999999999999999752 1 23578999999999999999999999
Q ss_pred ccccccceeeeecccc----ccHHHHHHHHHHHHHH--Hhhh-hHHHHHHHHHhcccCCcCCCCceEEEeccCCCCCCcc
Q 013771 290 VGNFVGDFPAKATQRE----IELQDLVHQLRKGKDE--FCKN-GMQNILEKKSSLMHGVEGDAVDFYMYSDLSRLPMYDT 362 (436)
Q Consensus 290 ~GN~v~~~~~~~~~~e----~~L~~~A~~Ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~~~ 362 (436)
|||++..+.+.++++| .+|+++|..||+++++ ++++ |+++ +|++..+.+ ... ..+.+|||.++++|++
T Consensus 319 ~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~---~~~~~~~~~-~~~-~~~~vssw~~~~~y~~ 393 (453)
T 2xr7_A 319 FGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG---SWFKEYDKV-DAK-RSLSVAGSPKLDLYAA 393 (453)
T ss_dssp CSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS---CTTSCCCCS-CGG-GEEEECSCSSCCGGGC
T ss_pred ccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh---HHHHHHHhh-ccC-CcEEEeccccCCcccc
Confidence 9999999998888874 6899999999999999 5677 8886 577654433 122 3599999999999999
Q ss_pred cccccceeeeeccc-ccCc--EEEEEEcCCC-CeEEEEEecCHHHHHHHhccHHHhc
Q 013771 363 DFGLGKPVWVTIPN-YMHN--MIMLLSTRNG-EGIEALVSLSEEDMALFERDEELLA 415 (436)
Q Consensus 363 DFG~G~P~~v~~~~-~~~g--~~~i~p~~~~-~g~ev~v~L~~~~m~~l~~D~e~~~ 415 (436)
|||||+|.++++.. +.+| .++++|++++ ||++|.|+|++++|++|++ ||.+
T Consensus 394 DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 394 DFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp CCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred ccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 99999999999877 6678 8888887765 4899999999999999965 6654
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=6.9e-65 Score=520.11 Aligned_cols=387 Identities=17% Similarity=0.180 Sum_probs=300.9
Q ss_pred eecCCccccCC--cccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCceec---------CceeEEeCCCCc
Q 013771 27 NFKLSLLDQIM--PVEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGIIK---------DNVLVECNDNGA 95 (436)
Q Consensus 27 ~~~LS~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---------~~~~i~~~~~gv 95 (436)
.++||.|||+. ++.|++.+|||+.++.. +.+++++.||+||+++|++||||||||+ ++++|+|++.++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~ 82 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS-QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVP 82 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG-GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSC
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCC
Confidence 37999999987 68999999999964321 2456899999999999999999999985 257888877777
Q ss_pred EEEEEEecc-----Chhhhcc-CCChhhh--hcccCCcc-----ccCCCCCCCeEEEEEEEEecCcEEEEeeecccccch
Q 013771 96 VFVEARANY-----PLSEVLQ-QHDHKLL--REFLPIEI-----ESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADG 162 (436)
Q Consensus 96 ~f~~a~~~~-----~l~~l~~-~p~~~~~--~~l~P~~~-----~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg 162 (436)
.|++++++. +++++.. ......+ ..|.|... ......+.|++.+|||+| |||++||+++||.++||
T Consensus 83 ~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~Dg 161 (451)
T 2rkv_A 83 RVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMDM 161 (451)
T ss_dssp EEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCCH
T ss_pred eEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccccH
Confidence 798888864 5777753 2111111 12334321 111224589999999965 79999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCCCC-CCCCCcccccccccCCC-----C--C--C-CCC------CCCCCCCeEEEEEEeCHHH
Q 013771 163 CAASFLAKSWAATVLDPGNKA-KVNTPEYVIAASLFPPD-----D--S--L-EPH------ADVTGQNYITKRFVFHASK 225 (436)
Q Consensus 163 ~g~~~fl~~wa~~~rg~~~~~-~~~~P~~drr~~l~~~~-----~--~--~-~~~------~~~~~~~~~~~~f~f~~~~ 225 (436)
.|+.+|+++||++|||...+. ....|.+| |+.+.|.. + . + +.. .+....++..++|+|++++
T Consensus 162 ~g~~~Fl~awa~~~rg~~~~~~~~~~p~~d-r~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~ 240 (451)
T 2rkv_A 162 VGQDAVIRLLSKACRNDPFTEEEMTAMNLD-RKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKA 240 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHTTCC-STTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccCc-hhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHH
Confidence 999999999999999942110 01257888 45444321 0 0 0 110 1122356889999999999
Q ss_pred HHHHHHHhhcCC---CCCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCCCCCCcccccccceeeeec
Q 013771 226 IAQLKAKVTSAS---VPKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKAT 302 (436)
Q Consensus 226 l~~Lk~~a~~~~---~~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~ 302 (436)
|++||+.+.++. ..++|++|+|+||+|+|++|||....++++.+++.++||+|+|++ +|.+||||++..+.+..+
T Consensus 241 i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~ 318 (451)
T 2rkv_A 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNST 318 (451)
T ss_dssp HHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEE
T ss_pred HHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccCc
Confidence 999999998653 367999999999999999999831123357899999999999998 899999999999998888
Q ss_pred ccc---ccHHHHHHHHHHHHHHHhhhh-HHHHHHHHHhcccC---Cc----CCCCceEEEeccCCCCCCccccc--ccce
Q 013771 303 QRE---IELQDLVHQLRKGKDEFCKNG-MQNILEKKSSLMHG---VE----GDAVDFYMYSDLSRLPMYDTDFG--LGKP 369 (436)
Q Consensus 303 ~~e---~~L~~~A~~Ir~ai~~~~~~~-~~~~~~~~~~~~~~---~~----~~~~~~~~~tsw~~~~~~~~DFG--~G~P 369 (436)
++| .+|+++|.+||+++.+++.+| +++.+ +|++.... +. ......+++|||+++++|++||| ||+|
T Consensus 319 ~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P 397 (451)
T 2rkv_A 319 IGEIANESLGATASRLRSELDPASMRQRTRGLA-TYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKP 397 (451)
T ss_dssp HHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHH-HHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSC
T ss_pred HHHhccchHHHHHHHHHHHhcccCchhHHHHHH-HHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCCCc
Confidence 876 899999999999999999888 99998 88876431 11 11122499999999999999998 7999
Q ss_pred eeeeccc--ccCcEEEEEEcCCCCeEEEEEecCHHHHHHHhccHHHhcccCC
Q 013771 370 VWVTIPN--YMHNMIMLLSTRNGEGIEALVSLSEEDMALFERDEELLAFADP 419 (436)
Q Consensus 370 ~~v~~~~--~~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~D~e~~~~~~~ 419 (436)
.+++.+. +.+|.++++|++.+||++|.++|++++|++|++|+||++|++.
T Consensus 398 ~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 398 ETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp SEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred eEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 9998765 4689999998766678999999999999999999999999864
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.02 E-value=6.6e-08 Score=96.45 Aligned_cols=271 Identities=14% Similarity=0.084 Sum_probs=155.9
Q ss_pred ceecCCccccCCc--ccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCceecCceeEEeCCCC-cEEEEEEe
Q 013771 26 RNFKLSLLDQIMP--VEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGIIKDNVLVECNDNG-AVFVEARA 102 (436)
Q Consensus 26 ~~~~LS~lD~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~g-v~f~~a~~ 102 (436)
..+|||++.+.+. ..++...+-++.+. ..+.|+++|.+++..+|.|-.++.. .+.+ +..+....
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l-------d~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~q~v~~~~ 72 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI-------DVDALSDAFDALLETHPVLASHLEQ------SSDGGWNLVADDL 72 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC-------CHHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEEEECCS
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC-------CHHHHHHHHHHHHHhCccceEEEEe------cCCcceeeeccCC
Confidence 4689999887542 23344444455433 3789999999999999999988751 1111 11111111
Q ss_pred cc---ChhhhccCCChhhhhcccCCccccCCCCCCCeEEEEEEEEecCcEEEEeeecccccchhhHHHHHHHHHHHhc--
Q 013771 103 NY---PLSEVLQQHDHKLLREFLPIEIESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFLAKSWAATVL-- 177 (436)
Q Consensus 103 ~~---~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-- 177 (436)
.. ...|+........+.. .. ...+ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.+.++
T Consensus 73 ~~~~~~~~d~~~~~~~~~~~~---~~-~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~ 146 (422)
T 1q9j_A 73 LHSGICVIDGTAATNGSPSGN---AE-LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDA 146 (422)
T ss_dssp SSCCCEEEC---------------CC-CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCCcchhhhc---cc-CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHh
Confidence 11 1111111111001100 00 1112 467888888777 778899999999999999999999999999887
Q ss_pred ---CCCCCCCCCCCcccc------cccccC-------C--CCC---------CCCC--CCCCCCCeEEEEEEeCHHHHHH
Q 013771 178 ---DPGNKAKVNTPEYVI------AASLFP-------P--DDS---------LEPH--ADVTGQNYITKRFVFHASKIAQ 228 (436)
Q Consensus 178 ---g~~~~~~~~~P~~dr------r~~l~~-------~--~~~---------~~~~--~~~~~~~~~~~~f~f~~~~l~~ 228 (436)
|... .....+.-+. ...... . .++ ++|. ............+.++.+..++
T Consensus 147 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (422)
T 1q9j_A 147 VTTGDPG-PITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSD 225 (422)
T ss_dssp HHSSSCC-CCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHHH
T ss_pred hccCCCC-CCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHH
Confidence 3211 1111111110 000000 0 011 1111 1111122356788899999999
Q ss_pred HHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCCCCCCcccccccceeeeecccc-cc
Q 013771 229 LKAKVTSASVPKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKATQRE-IE 307 (436)
Q Consensus 229 Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~e-~~ 307 (436)
|++.|.+ ..+|.++++.|.+-..+.|-+.. . .....+.+++++|....|+++..=+.|.+.+....++++. .+
T Consensus 226 l~~~a~~---~~~t~~~~l~aa~~~~l~r~~~~-~--~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~~~ 299 (422)
T 1q9j_A 226 LMAFGRE---HRLSLNAVVAAAILLTEWQLRNT-P--HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTD 299 (422)
T ss_dssp HHHHHTT---TTCCHHHHHHHHHHHHHHHHHTC-S--SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSSCC
T ss_pred HHHHHHH---hCCCHHHHHHHHHHHHHHhcccC-C--CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCCCC
Confidence 9999875 56899999999876666654221 1 2467889999999987655432223344444334444443 57
Q ss_pred HHHHHHHHHHHHHHH
Q 013771 308 LQDLVHQLRKGKDEF 322 (436)
Q Consensus 308 L~~~A~~Ir~ai~~~ 322 (436)
+.+++..+++.+.+.
T Consensus 300 ~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 300 IVDLASDIVATLRAD 314 (422)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 778888888877653
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.48 E-value=4.3e-05 Score=78.39 Aligned_cols=265 Identities=10% Similarity=0.041 Sum_probs=161.1
Q ss_pred ceecCCccccCC-------c---ccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCceec---Cce-eEEeC
Q 013771 26 RNFKLSLLDQIM-------P---VEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGIIK---DNV-LVECN 91 (436)
Q Consensus 26 ~~~~LS~lD~~~-------~---~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~~-~i~~~ 91 (436)
..+|||+.-+.+ + ..++...+-++... ..+.|++++.+++.++|.|--++. +.+ .+...
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l-------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 167 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL-------ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHE 167 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC-------CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECS
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC-------CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECC
Confidence 468999765421 1 12345555555433 389999999999999999988875 111 11111
Q ss_pred CCCcEEEEEEeccChhhhccCCChhhhhcc--cCCccccCCCCCCCeEEEEEEEEecCcEEEEeeecccccchhhHHHHH
Q 013771 92 DNGAVFVEARANYPLSEVLQQHDHKLLREF--LPIEIESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFLA 169 (436)
Q Consensus 92 ~~gv~f~~a~~~~~l~~l~~~p~~~~~~~l--~P~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~fl 169 (436)
+..+.+...+ .+-+++. ..... -|. +....|++++.+.....+...|-+.+||.++||.|+..|+
T Consensus 168 ~~~~~~~~~~--~~~~~~~------~~~~~~~~~f-----dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~ 234 (520)
T 2jgp_A 168 DVPFALAYSE--VTEEEAR------ELVSSLVQPF-----DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILL 234 (520)
T ss_dssp CCCCCCEEEE--CCHHHHH------HHHHHTCCCC-----CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHH
T ss_pred CCCCceEEEe--CCHHHHH------HHHHHhcCCC-----CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHH
Confidence 1111111111 1111111 01111 121 1235788888877776677999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCcccc----cc----------------cccC-CCCCCCCC----CCCCCCCeEEEEEEeCHH
Q 013771 170 KSWAATVLDPGNKAKVNTPEYVI----AA----------------SLFP-PDDSLEPH----ADVTGQNYITKRFVFHAS 224 (436)
Q Consensus 170 ~~wa~~~rg~~~~~~~~~P~~dr----r~----------------~l~~-~~~~~~~~----~~~~~~~~~~~~f~f~~~ 224 (436)
+.+.+.+++...+ +...+.-|. +. .+.. +...++|. +...........+.++.+
T Consensus 235 ~el~~~Y~~~~l~-~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 313 (520)
T 2jgp_A 235 AEWVQLYQGDVLP-ELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKA 313 (520)
T ss_dssp HHHHHHHTTCCCC-CCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHH
T ss_pred HHHHHHHccCCCC-CCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHH
Confidence 9999999984211 111111110 00 0000 00012221 111223355678899999
Q ss_pred HHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCCCCCCCcccccccceeeeeccc
Q 013771 225 KIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKATQR 304 (436)
Q Consensus 225 ~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~ 304 (436)
..++|++.|.. ..+|.+.++.|.+-..+.+-.+ .+...+.+++++|..- --++-+|+.+-.........
T Consensus 314 ~~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~ 382 (520)
T 2jgp_A 314 LTEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQ 382 (520)
T ss_dssp HHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCC
T ss_pred HHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCC
Confidence 99999999875 4689999998876555555443 2457899999999752 23466788777766666655
Q ss_pred c-ccHHHHHHHHHHHHHHH
Q 013771 305 E-IELQDLVHQLRKGKDEF 322 (436)
Q Consensus 305 e-~~L~~~A~~Ir~ai~~~ 322 (436)
. .++.+++..|++.+.+.
T Consensus 383 ~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 383 REKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp TTSBHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 4 68889999998887664
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.47 E-value=1.2e-05 Score=80.49 Aligned_cols=238 Identities=13% Similarity=0.054 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHhhhcccCCCceecCceeEEeCCCCcEEEEEEeccChhhhccCCCh-hhh----hcc--cCCccccCCCC
Q 013771 60 MSQRLKAALPETLKNFYPFAGIIKDNVLVECNDNGAVFVEARANYPLSEVLQQHDH-KLL----REF--LPIEIESTKAG 132 (436)
Q Consensus 60 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~-~~~----~~l--~P~~~~~~~~~ 132 (436)
..+.|++++.+++..+|.|--++...-.+......+.+. +.|+...++. ..+ ... -|.+ ..
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~~~~v~~~~~~~~~-------~~d~~~~~~~~~~~~~~~~~~~~~~fd-----l~ 101 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPID-------YQDLSIHLEAEPLAWRQIEQDLQRSST-----LI 101 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCCCE-------EEECTTCTTHHHHHHHHHHHHHTSCCC-----CB
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEecCCeECCCcCCCcc-------EEeCCCCCCHHHHHHHHHHHHhcCCCC-----cC
Confidence 389999999999999999988875200011111111111 1112111111 011 111 1222 23
Q ss_pred CCCeEEEEEEEEecCcEEEEeeecccccchhhHHHHHHHHHHHhc----CCCCCCCCCCCcccc---cccccC-------
Q 013771 133 SGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFLAKSWAATVL----DPGNKAKVNTPEYVI---AASLFP------- 198 (436)
Q Consensus 133 ~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~~~P~~dr---r~~l~~------- 198 (436)
..|++++.+.....+...|.+.+||.++||.|+..|++.+.+.+. |... .....+.-|- ...+..
T Consensus 102 ~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
T 1l5a_A 102 DAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTP-TAAFKPYQSYLEEEAAYLTSHRYWQD 180 (436)
T ss_dssp TSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCC-CCCCCCHHHHHHHHHHHHTSHHHHHH
T ss_pred CCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCC-CCCccCHHHHHHHHHHhhccHhHHHH
Confidence 468888877777667899999999999999999999999999887 4211 1111111110 000000
Q ss_pred -----------CCCCCCCCCC-CCCCCeEEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcCcCCCC
Q 013771 199 -----------PDDSLEPHAD-VTGQNYITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASRSIRGFP 266 (436)
Q Consensus 199 -----------~~~~~~~~~~-~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~~~~~~ 266 (436)
+....+|... ..........+.++.+..++|++.|.. ..+|.+.++.|.+-..+.+-.+
T Consensus 181 ~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~g------ 251 (436)
T 1l5a_A 181 KQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAEP------ 251 (436)
T ss_dssp HHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHST------
T ss_pred HHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhhC------
Confidence 0001122111 112234577889999999999999986 4689999998876555554432
Q ss_pred ceEEEEEEeccccccCCCCCCCcccccccceeeeecccc-ccHHHHHHHHHHHHHHH
Q 013771 267 RVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKATQRE-IELQDLVHQLRKGKDEF 322 (436)
Q Consensus 267 ~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~e-~~L~~~A~~Ir~ai~~~ 322 (436)
+...+.+++++|.. + --.+-+|+.+-.......... .++.+++..|++.+.+.
T Consensus 252 ~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 252 DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 34789999999965 2 234667777766666666554 68999999999888764
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.34 E-value=5.8e-05 Score=76.87 Aligned_cols=269 Identities=14% Similarity=0.037 Sum_probs=153.3
Q ss_pred ceecCCccccC-------CcccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCceec---CceeEEeCCCCc
Q 013771 26 RNFKLSLLDQI-------MPVEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGIIK---DNVLVECNDNGA 95 (436)
Q Consensus 26 ~~~~LS~lD~~-------~~~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~~~i~~~~~gv 95 (436)
..+|||+.-+. .+.......+.|..... ...++|+++|.+++..+|.|--++. +.+. ......+
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~ 85 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-----IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENAD 85 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-----CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCC
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-----CCHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCC
Confidence 46888876542 12111233334443332 2489999999999999999988875 2222 2221113
Q ss_pred EEEEEEeccChhhhccCCCh-hhh----hcc--cCCccccCCCCCCCeEEEEEEEEecCcEEEEeeecccccchhhHHHH
Q 013771 96 VFVEARANYPLSEVLQQHDH-KLL----REF--LPIEIESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFL 168 (436)
Q Consensus 96 ~f~~a~~~~~l~~l~~~p~~-~~~----~~l--~P~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~f 168 (436)
.+.+.+.. ..++. ..+ ... -|.+ ....|++++.+.....+...|.+.+||.++||.|+..|
T Consensus 86 ~~~~~d~~-------~~~~~~~~~~~~~~~~~~~~fd-----l~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l 153 (493)
T 4hvm_A 86 ALVRSDLR-------GHPDPQARCVELLRADRDRPTD-----PERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMV 153 (493)
T ss_dssp CEEEEECT-------TSSSHHHHHHHHHHHHHSSCCC-----TTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHH
T ss_pred CceEEECC-------CCCchHHHHHHHHHHHhcCCCC-----CCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHH
Confidence 33322211 11110 111 111 1221 23568888887777756689999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCcccc----cc--cccCCC-------------CC-CCCCCCCCCCCeEEEEEEeCHHHHHH
Q 013771 169 AKSWAATVLDPGNKAKVNTPEYVI----AA--SLFPPD-------------DS-LEPHADVTGQNYITKRFVFHASKIAQ 228 (436)
Q Consensus 169 l~~wa~~~rg~~~~~~~~~P~~dr----r~--~l~~~~-------------~~-~~~~~~~~~~~~~~~~f~f~~~~l~~ 228 (436)
++.+.+.+.|.. .+ .+..|. +. .+..+. +. +++....+........+.++.+..++
T Consensus 154 ~~~l~~~Y~g~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~ 229 (493)
T 4hvm_A 154 LGAVWQAYYGRF--RP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRVPGSRWQA 229 (493)
T ss_dssp HHHHHHHHTTCC--CG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEEEEHHHHHH
T ss_pred HHHHHHHhCCCC--CC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEcCHHHHHH
Confidence 999999998732 11 221110 00 000000 00 10000001112567788999999999
Q ss_pred HHHHhhcCCCCCCC--hhHHHHHHHHHHHHHhhcC------cCCCCceEEEEEEeccccccCCCCCCCcccccccceeee
Q 013771 229 LKAKVTSASVPKPT--RVEAIVALIWKSTITASRS------IRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAK 300 (436)
Q Consensus 229 Lk~~a~~~~~~~~S--t~dal~A~lW~~~~rAr~~------~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~ 300 (436)
|++.|.+ ..+| .+.++.|.+-..+.+-+.. .........+.+++++|..- --.+.+|+++-.....
T Consensus 230 l~~~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr 303 (493)
T 4hvm_A 230 LTEPGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFG 303 (493)
T ss_dssp HHCC---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEE
T ss_pred HHHHHHH---cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---chhcCeEeeeceeEEE
Confidence 9988764 4688 9999988765555444110 00113578899999999762 2457788877766666
Q ss_pred eccc---cccHHHHHHHHHHHHHHH
Q 013771 301 ATQR---EIELQDLVHQLRKGKDEF 322 (436)
Q Consensus 301 ~~~~---e~~L~~~A~~Ir~ai~~~ 322 (436)
+... +.++.+++..+++.+.+.
T Consensus 304 ~~~~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 304 VDLTGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp EECTTCSSCBHHHHHHHHHHHHHHH
T ss_pred EecCCCcCCCHHHHHHHHHHHHHHH
Confidence 5543 367888888888887664
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.28 E-value=0.00049 Score=69.20 Aligned_cols=274 Identities=11% Similarity=0.081 Sum_probs=159.0
Q ss_pred ceecCCccccCC-----c-ccceeEEEEecCCCCCCCchhHHHHHHHHHHHhhhcccCCCceecC---ce-eEEeC--CC
Q 013771 26 RNFKLSLLDQIM-----P-VEYTAAILFYSNNGHHADGAEMSQRLKAALPETLKNFYPFAGIIKD---NV-LVECN--DN 93 (436)
Q Consensus 26 ~~~~LS~lD~~~-----~-~~~~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~---~~-~i~~~--~~ 93 (436)
..+|||+..+++ + .......+.|..... ...+.|+++|.+++..++.|--++.. .+ .+... ..
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG-----FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC-----CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC-----CCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 568999875521 1 112223334443332 24899999999999999999888752 22 11111 12
Q ss_pred CcEEEEEEecc--ChhhhccCCChhhhhcc-cCCccccCCCCCCCeEEEEEEEEecCcEEEEeeecccccchhhHHHHHH
Q 013771 94 GAVFVEARANY--PLSEVLQQHDHKLLREF-LPIEIESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFLAK 170 (436)
Q Consensus 94 gv~f~~a~~~~--~l~~l~~~p~~~~~~~l-~P~~~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~fl~ 170 (436)
.+.+.+.+... ..++... ...+.+ -|.+ ....|++++.+.... ++-.|-+.+||.++||.|+..|++
T Consensus 91 ~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~fd-----l~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~ 160 (466)
T 2xhg_A 91 LYDFFSYNLTAQPDVQQAIE----AETQRLHSSMN-----LQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFE 160 (466)
T ss_dssp CCEEEEEECTTCSCHHHHHH----HHHHHHHTTCC-----TTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHH
T ss_pred cceeEEEecCCcccHHHHHH----HHHHHHHhccC-----CCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHH
Confidence 22332222110 0110000 000111 1221 245688888887777 444577999999999999999999
Q ss_pred HHHHHhcCCC--CCCCCC-CC-cc-c--c--cccc------------------cCCCCCCCCCC----CCCCCCeEEEEE
Q 013771 171 SWAATVLDPG--NKAKVN-TP-EY-V--I--AASL------------------FPPDDSLEPHA----DVTGQNYITKRF 219 (436)
Q Consensus 171 ~wa~~~rg~~--~~~~~~-~P-~~-d--r--r~~l------------------~~~~~~~~~~~----~~~~~~~~~~~f 219 (436)
.+.+.+++.. .+.... .+ .+ | . +... .++. .+|.. ...........+
T Consensus 161 el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~--~lp~~~~~~~~~~~~~~~~~~ 238 (466)
T 2xhg_A 161 DLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNV--SLPKDYEVTDCKQKSVRNMRI 238 (466)
T ss_dssp HHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCC--CCCCSSCCSSCBGGGEEEEEE
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcc--cCCccccccccccccceEEEE
Confidence 9998875310 111111 11 11 1 0 0000 0111 12211 111223466788
Q ss_pred EeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcCcCCCCceEEEEEEeccccccCC-CCCCCccccccccee
Q 013771 220 VFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASRSIRGFPRVSLTAHSMNLRRMVSP-PLPDNCVGNFVGDFP 298 (436)
Q Consensus 220 ~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p-plp~~Y~GN~v~~~~ 298 (436)
.++++..++|++.+... ..+|.++++.|.+-..+.+-.+ .....+.+++++|....+ +--.+-+|+.+....
T Consensus 239 ~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lp 311 (466)
T 2xhg_A 239 RLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYP 311 (466)
T ss_dssp ECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEE
T ss_pred EcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccceeeecc
Confidence 99999999999877532 3588999998886666655543 246789999999976421 123466777776666
Q ss_pred eeecccc-ccHHHHHHHHHHHHHHHh
Q 013771 299 AKATQRE-IELQDLVHQLRKGKDEFC 323 (436)
Q Consensus 299 ~~~~~~e-~~L~~~A~~Ir~ai~~~~ 323 (436)
....... .++.+++..|++.+.++.
T Consensus 312 lr~~~~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 312 VLLDLKQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEECSCCCSHHHHHHHHHHHHHHSG
T ss_pred EEEecCCCCCHHHHHHHHHHHHHhCc
Confidence 6666554 689999999999988763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.01 E-value=0.001 Score=76.04 Aligned_cols=241 Identities=12% Similarity=0.055 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHhhhcccCCCceecC---c--eeEEeCCCCcEEEEEEeccChhhhccCCCh---hhhhcc------cCCc
Q 013771 60 MSQRLKAALPETLKNFYPFAGIIKD---N--VLVECNDNGAVFVEARANYPLSEVLQQHDH---KLLREF------LPIE 125 (436)
Q Consensus 60 ~~~~L~~sL~~~L~~~p~LaGrl~~---~--~~i~~~~~gv~f~~a~~~~~l~~l~~~p~~---~~~~~l------~P~~ 125 (436)
..+.|+++|.+++.+++.|--++.. . .++......+.+.+. |+...+.. ..+..+ -|.+
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEI-------DLTHLTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEE-------ECTTSCHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEE-------ECCCCCchhHHHHHHHHHHHHhcCCCC
Confidence 3899999999999999999888751 1 122222222222111 12111110 111111 1222
Q ss_pred cccCCCCCCCeEEEEEEEEecCcEEEEeeecccccchhhHHHHHHHHHHHhcCCC--CCCC-CCC-Ccccc----cc---
Q 013771 126 IESTKAGSGPLLLTQVTIFKCGGVAVGNCLSHKIADGCAASFLAKSWAATVLDPG--NKAK-VNT-PEYVI----AA--- 194 (436)
Q Consensus 126 ~~~~~~~~~Pll~vQvt~f~cGG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~--~~~~-~~~-P~~dr----r~--- 194 (436)
....|++++.+.....+...|-+.+||.++||.|+..|++.+++.+++.. .+.. ... +.-|. .+
T Consensus 121 -----l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~ 195 (1304)
T 2vsq_A 121 -----LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDK 195 (1304)
T ss_dssp -----TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCH
T ss_pred -----CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchh
Confidence 23568898888888767899999999999999999999999998876410 1110 111 11110 00
Q ss_pred ---------cc--cCCCCCCCCCC---CCCCCCeEEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhc
Q 013771 195 ---------SL--FPPDDSLEPHA---DVTGQNYITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASR 260 (436)
Q Consensus 195 ---------~l--~~~~~~~~~~~---~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~ 260 (436)
.+ .++ ...+|.. ...........+.++++..++||+.|.+ ..+|.+.+|.|.+-..+.|-.+
T Consensus 196 ~~~~~yW~~~L~~~~~-~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~---~~~T~~~vllaa~a~~L~r~tg 271 (1304)
T 2vsq_A 196 QASLRYWREYLEGFEG-QTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKS---QHTTLSTALQAVWSVLISRYQQ 271 (1304)
T ss_dssp HHHHHHHHHHHTTCCC-CCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhCCCCc-cccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC
Confidence 00 000 0012211 1112234567788999999999999986 4689999998875555554432
Q ss_pred CcCCCCceEEEEEEeccccccCCCCCCCcccccccceeeeecccc-ccHHHHHHHHHHHHHHH
Q 013771 261 SIRGFPRVSLTAHSMNLRRMVSPPLPDNCVGNFVGDFPAKATQRE-IELQDLVHQLRKGKDEF 322 (436)
Q Consensus 261 ~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~e-~~L~~~A~~Ir~ai~~~ 322 (436)
.+...+..++++|..-.+.+ ++-.|+.+-....+..... .++.++...+++.+.+.
T Consensus 272 -----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 272 -----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp -----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 24688999999997532222 4667777766666666554 78999999999888664
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.68 E-value=0.0013 Score=67.25 Aligned_cols=174 Identities=13% Similarity=-0.003 Sum_probs=108.1
Q ss_pred cEEEEeeecccccchhhHHHHHHHHHHHhcCCCC-CCCCCCCccc---ccccccCCCC-C-CCC----------------
Q 013771 148 GVAVGNCLSHKIADGCAASFLAKSWAATVLDPGN-KAKVNTPEYV---IAASLFPPDD-S-LEP---------------- 205 (436)
Q Consensus 148 G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~-~~~~~~P~~d---rr~~l~~~~~-~-~~~---------------- 205 (436)
-.-|-+.+||.++||.|...|++.+=+....... ......|.++ ....|.|+-+ . ++|
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 4678888999999999999999999877763210 0111222221 0112333211 0 111
Q ss_pred -------CCC-----CCCCCeEEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcC-cCCCCceEEEE
Q 013771 206 -------HAD-----VTGQNYITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASRS-IRGFPRVSLTA 272 (436)
Q Consensus 206 -------~~~-----~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~-~~~~~~~~~l~ 272 (436)
..+ ..+..-....+.|++++.++|++.|.+..++.+|-+.+|.|.+-.++.+.... ...........
T Consensus 257 ~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~ 336 (519)
T 3fot_A 257 SALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISP 336 (519)
T ss_dssp HHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEE
T ss_pred HHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEE
Confidence 000 01123445678999999999999998754558999999988776666654221 11113467899
Q ss_pred EEeccccccCCCCCCCcccccccceeeeecc-c---------c--cc--HHHHHHHHHHHHHH
Q 013771 273 HSMNLRRMVSPPLPDNCVGNFVGDFPAKATQ-R---------E--IE--LQDLVHQLRKGKDE 321 (436)
Q Consensus 273 ~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~-~---------e--~~--L~~~A~~Ir~ai~~ 321 (436)
++||+|+++.++.-.+|||.+........+. . | .. +.++++.+++....
T Consensus 337 ~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 337 TSVDGRRWLREDIASNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp EEEECGGGBCHHHHTSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccCCCcccccccceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 9999999997665568888887765544422 1 1 11 46677777776655
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=76.95 E-value=2 Score=38.17 Aligned_cols=44 Identities=9% Similarity=0.128 Sum_probs=32.6
Q ss_pred CCeEEEEEEEEecCc--EEEEeeecccccchhhHHHHHHHHHHHhc
Q 013771 134 GPLLLTQVTIFKCGG--VAVGNCLSHKIADGCAASFLAKSWAATVL 177 (436)
Q Consensus 134 ~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (436)
.|++.+=-..-+.|. +-|++++||.+.||.-+.+|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 587764221112233 67889999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=75.85 E-value=2.2 Score=37.98 Aligned_cols=43 Identities=23% Similarity=0.311 Sum_probs=31.1
Q ss_pred CCeEEEEEEEEecCc--EEEEeeecccccchhhHHHHHHHHHHHh
Q 013771 134 GPLLLTQVTIFKCGG--VAVGNCLSHKIADGCAASFLAKSWAATV 176 (436)
Q Consensus 134 ~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 176 (436)
.|++.+=-..-+.|. +-|++++||.+.||.-+.+|++.+.+..
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 587754111112233 5788999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=75.69 E-value=2.2 Score=38.00 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=32.9
Q ss_pred CCeEEEEEEEEecCc--EEEEeeecccccchhhHHHHHHHHHHHhc
Q 013771 134 GPLLLTQVTIFKCGG--VAVGNCLSHKIADGCAASFLAKSWAATVL 177 (436)
Q Consensus 134 ~Pll~vQvt~f~cGG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (436)
.|++.+--..-+.|. +-|+++++|.+.||.-+.+|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765222223233 67899999999999999999999998764
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=72.80 E-value=2.5 Score=37.88 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=27.5
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998865
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=72.31 E-value=3 Score=37.54 Aligned_cols=30 Identities=13% Similarity=0.166 Sum_probs=27.4
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999988754
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=72.17 E-value=3 Score=37.79 Aligned_cols=30 Identities=17% Similarity=0.298 Sum_probs=27.3
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999987754
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=72.16 E-value=2.8 Score=37.92 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=27.5
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999987643
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=70.74 E-value=3.4 Score=37.94 Aligned_cols=30 Identities=23% Similarity=0.449 Sum_probs=27.1
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999987754
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=66.68 E-value=4.6 Score=36.87 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=27.7
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998875
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=65.35 E-value=5.1 Score=36.43 Aligned_cols=30 Identities=10% Similarity=0.250 Sum_probs=27.5
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998765
No 23
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=49.89 E-value=21 Score=23.22 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=26.7
Q ss_pred EEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhh
Q 013771 215 ITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITAS 259 (436)
Q Consensus 215 ~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr 259 (436)
....|+||+++-+.|++.|.++. |.+..++=|.+.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~-------eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE-------ESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT-------SCTTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 45689999999999999998753 223344555555554
No 24
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=48.93 E-value=32 Score=23.21 Aligned_cols=42 Identities=10% Similarity=0.157 Sum_probs=32.0
Q ss_pred CeEEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhhcC
Q 013771 213 NYITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTITASRS 261 (436)
Q Consensus 213 ~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~rAr~~ 261 (436)
+.-...|+||+++-+.|.+.|.++ -|.+..++=|.+.++...
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~y 55 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIY 55 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCS
T ss_pred cceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 445778999999999999999865 344666777777777543
No 25
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=47.24 E-value=11 Score=20.31 Aligned_cols=18 Identities=11% Similarity=0.237 Sum_probs=14.9
Q ss_pred CCChhHHHHHHHHHHHHH
Q 013771 240 KPTRVEAIVALIWKSTIT 257 (436)
Q Consensus 240 ~~St~dal~A~lW~~~~r 257 (436)
-.+..|-|+-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 467789999999998863
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=43.10 E-value=5.1 Score=39.58 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=0.0
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhcC
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVLD 178 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (436)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 359999999999999999999999987654
No 27
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=26.86 E-value=1.1e+02 Score=19.18 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=27.0
Q ss_pred CeEEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHH
Q 013771 213 NYITKRFVFHASKIAQLKAKVTSASVPKPTRVEAIVALIWKSTIT 257 (436)
Q Consensus 213 ~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~St~dal~A~lW~~~~r 257 (436)
.....++++-+++|++||.. +..|...+|++-+.+..
T Consensus 12 dtkpvvvrlypdeiealksr--------vpantsmsayirriiln 48 (53)
T 2kke_A 12 DTKPVVVRLYPDEIEALKSR--------VPANTSMSAYIRRIILN 48 (53)
T ss_dssp SSEEEEEEECHHHHHHHHTT--------CCSSSCHHHHHHHHHHH
T ss_pred cCCceEEEeChhHHHHHHhc--------CCCcccHHHHHHHHHHh
Confidence 34567788999999999954 44566678888766543
No 28
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=24.54 E-value=53 Score=36.48 Aligned_cols=29 Identities=14% Similarity=0.334 Sum_probs=26.3
Q ss_pred EEEEeeecccccchhhHHHHHHHHHHHhc
Q 013771 149 VAVGNCLSHKIADGCAASFLAKSWAATVL 177 (436)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (436)
+-|+++++|.+.||.-+..|++.+.+...
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le 220 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLL 220 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHh
Confidence 78999999999999999999998887665
Done!