BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013772
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
pdb|3HD8|C Chain C, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 132/361 (36%), Gaps = 47/361 (13%)
Query: 92 LDLDTGSDLIWLQCD---APCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDP 148
L LD L+W C+ +P +P L + C P C G + + P
Sbjct: 28 LVLDVAGLLVWSTCEGGQSPAEIACSSPTCLLANAYPAPGCPAPSC------GSDRHDKP 81
Query: 149 TQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQR----LNPRLALGCGYDQVPGASYHPLD 204
Y G + G L FA N T+G + +N R+ C ++ +
Sbjct: 82 CTA-YPSNPVTGACAAGSLFHTRFAANTTDGNKPVSEVNVRVLAACAPSKLLASLPRGST 140
Query: 205 GILGLGKGKSSIVSQLHSQKLIRNVVGHCXXXXXXXXXXXXXXXXXXXRVVWTSMSSDYT 264
G+ GL ++ SQ+ S + + N C + + S DYT
Sbjct: 141 GVAGLAGSGLALPSQVASAQKVPNKFLLCLPTGGPGVAIFGGGPLPWPQF---TQSMDYT 197
Query: 265 KYYSPGVAEL-FFGGKTTGLKN--LP----------VVFDSGSSYTYLSHVAYQTLTSMM 311
+ G + + ++ ++N +P V+ + Y L Y+ L
Sbjct: 198 PLVAKGGSPAHYISARSIKVENTRVPISERALATGGVMLSTRLPYVLLRRDVYRPLVDAF 257
Query: 312 KRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKK-------YFKSLALSFTDGKTRTL 364
+ L+A+ AP R + K PF+ D K Y+ L DG +
Sbjct: 258 TKALAAQPANGAPVARAV----KPVAPFELCYDTKTLGNNPGGYWVPNVLLELDGGSD-- 311
Query: 365 FELTTEAYLIISNRGNVCLGILNGAEVGLQDLN----VIGDISMQDRVVIYDNEKQRIGW 420
+ +T + ++ G C+ + V D + ++G M+D V+ +D EK+R+G+
Sbjct: 312 WAMTGKNSMVDVKPGTACVAFVEMKGVDAGDGSAPAVILGGAQMEDFVLDFDMEKKRLGF 371
Query: 421 M 421
+
Sbjct: 372 L 372
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6
pdb|1UH8|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 8.0
pdb|1UH9|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 7.0
Length = 325
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 31/153 (20%)
Query: 81 VYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP 140
V +G P K + LD DTGS +W+ C C + Y P+ ++ A
Sbjct: 21 VTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNC-GSRQTKYDPNQ---------SSTYQAD 69
Query: 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASY 200
G+ + + Y DG S+ G+L KD N G L + + +
Sbjct: 70 GRT---------WSISYGDGSSASGILAKD----NVNLGGLLIKGQTIELAKREAASFAS 116
Query: 201 HPLDGILGLG-------KGKSSIVSQLHSQKLI 226
P DG+LGLG +G + + L SQ LI
Sbjct: 117 GPNDGLLGLGFDTITTVRGVKTPMDNLISQGLI 149
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic
Proteinase From Rhizopus Chinensis. Implications For A
Mechanism Of Action
pdb|4APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|5APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|6APR|E Chain E, Structures Of Complexes Of Rhizopuspepsin With Pepstatin
And Other Statine-Containing Inhibitors
pdb|2APR|A Chain A, Structure And Refinement At 1.8 Angstroms Resolution Of
The Aspartic Proteinase From Rhizopus Chinensis
Length = 325
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 31/153 (20%)
Query: 81 VYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP 140
V +G P K + LD DTGS +W+ C C + Y P+ ++ A
Sbjct: 21 VTIGTPGKKFNLDFDTGSSDLWI-ASTLCTNC-GSGQTKYDPNQ---------SSTYQAD 69
Query: 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASY 200
G+ + + Y DG S+ G+L KD N G L + + +
Sbjct: 70 GRT---------WSISYGDGSSASGILAKD----NVNLGGLLIKGQTIELAKREAASFAS 116
Query: 201 HPLDGILGLG-------KGKSSIVSQLHSQKLI 226
P DG+LGLG +G + + L SQ LI
Sbjct: 117 GPNDGLLGLGFDTITTVRGVKTPMDNLISQGLI 149
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor I
pdb|1T6G|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
pdb|1T6G|B Chain B, Crystal Structure Of The Triticum Aestivum Xylanase
Inhibitor-i In Complex With Aspergillus Niger Xylanase-i
Length = 381
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 123/369 (33%), Gaps = 65/369 (17%)
Query: 92 LDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPT-- 149
L LD L+W CD +P + +PC P C +A C P+
Sbjct: 26 LVLDVAGPLVWSTCDG------------GQPPAE-IPCSSPTCLLANAYPAPGCPAPSCG 72
Query: 150 ------QCD-YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALG----CGYDQVPGA 198
C Y G + G L F N T+G + ++ +G C ++ +
Sbjct: 73 SDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS 132
Query: 199 SYHPLDGILGLGKGKSSIVSQLHSQKLIRNVVGHCXXXXXXXXXXXXXXXXXXXRVVWT- 257
G+ GL ++ +Q+ S + + N C V W
Sbjct: 133 LPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGP-----VPWPQ 187
Query: 258 -SMSSDYTKYYSPG-------VAELFFGGKT------TGLKNLPVVFDSGSSYTYLSHVA 303
+ S YT + G A G T L V+ + Y L
Sbjct: 188 FTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDV 247
Query: 304 YQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLA--------LS 355
Y+ L + L+A+ AP R + + PF D K +L L
Sbjct: 248 YRPLMDAFTKALAAQHANGAPVARAV----EAVAPFGVCYDTKTLGNNLGGYAVPNVQLG 303
Query: 356 FTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLN----VIGDISMQDRVVIY 411
G T+ T + ++ +G C+ + V D ++G M+D V+ +
Sbjct: 304 LDGGSDWTM---TGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDF 360
Query: 412 DNEKQRIGW 420
D EK+R+G+
Sbjct: 361 DMEKKRLGF 369
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
Length = 413
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 296 YTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALS 355
YT L Y+ +T +E +A+++ C+ N+ + ++
Sbjct: 276 YTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTD----NILSTRLGPSVPSID 331
Query: 356 FTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEK 415
++ +T ++ N VCLG+++G L+ VIG ++D +V +D
Sbjct: 332 LVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTSIVIGGHQLEDNLVQFDLAT 390
Query: 416 QRIGW 420
R+G+
Sbjct: 391 SRVGF 395
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp
pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp
Length = 413
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 296 YTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALS 355
YT L Y+ +T +E +A+++ C+ N+ + ++
Sbjct: 276 YTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTD----NILSTRLGPSVPSID 331
Query: 356 FTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEK 415
++ +T ++ N VCLG+++G L+ VIG ++D +V +D
Sbjct: 332 LVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTSIVIGGHQLEDNLVQFDLAT 390
Query: 416 QRIGW 420
R+G+
Sbjct: 391 SRVGF 395
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|B Chain B, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|C Chain C, Crystal Structure Of Basic 7s Globulin From Soybean
pdb|3AUP|D Chain D, Crystal Structure Of Basic 7s Globulin From Soybean
Length = 403
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLP--LCWKGKRPFKNVRDV 345
+ + + + L YQ T + ++L K+A P LC+ N +
Sbjct: 262 TMISTSTPHMVLQQSVYQAFTQVFAQQLP----KQAQVKSVAPFGLCF-------NSNKI 310
Query: 346 KKYFKSLALSFTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQ 405
Y S+ L D ++ ++ E ++ + G CLG++NG ++ +G ++
Sbjct: 311 NAY-PSVDL-VMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEI-TLGARQLE 367
Query: 406 DRVVIYDNEKQRIGW 420
+ +V++D + R+G+
Sbjct: 368 ENLVVFDLARSRVGF 382
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of
Cathepsin E
Length = 351
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 43/163 (26%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAP---HPLYRPSNDLVPCEDPI 133
Y T+ +G PP+ + + DTGS +W+ P V C H ++PS
Sbjct: 25 YFGTISIGSPPQNFTVIFDTGSSNLWV----PSVYCTSPACKTHSRFQPSQS-------- 72
Query: 134 CASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTN--GQRLNPRLALGCG 191
++ PGQ + ++Y G S G++ D + GQ+ +
Sbjct: 73 -STYSQPGQ---------SFSIQYGTGSLS-GIIGADQVSVEGLTVVGQQFGESVT---- 117
Query: 192 YDQVPGASY--HPLDGILGLG------KGKSSIVSQLHSQKLI 226
PG ++ DGILGLG G + + + +Q L+
Sbjct: 118 ---EPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLV 157
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of
A Pepsin From Atlantic Cod (Gadus Morhua)
Length = 324
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 32/165 (19%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPC 129
N T YY V + +G PP+ + + DTGS +W+ + C + H ++P
Sbjct: 8 NEADTEYYGV-ISIGTPPESFKVIFDTGSSNLWVS-SSHCSAQACSNHNKFKPRQSSTYV 65
Query: 130 EDPICASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALG 189
E T ++ Y GG G+L +D + G +P LG
Sbjct: 66 E------------------TGKTVDLTYGTGGMR-GILGQDTVSV----GGGSDPNQELG 102
Query: 190 CGYDQV-PGASYHPLDGILGL------GKGKSSIVSQLHSQKLIR 227
+ P + P DGILGL G + + SQ L+
Sbjct: 103 ESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVE 147
>pdb|1WKR|A Chain A, Crystal Structure Of Aspartic Proteinase From Irpex
Lacteus
Length = 340
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQC 112
Y V V VG P Y L +DTGS WL D V+
Sbjct: 14 YVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKT 49
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
pdb|2QZW|B Chain B, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans
Length = 341
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 30/139 (21%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWL-----QCDAPCVQCVEAPHPLYRPSNDLVPCED 131
Y + +G + + + +DTGS +W+ CD P RP C+
Sbjct: 14 YAADITIGSNKQKFNVIVDTGSSDLWVPDASVTCDKP------------RPGQSADFCK- 60
Query: 132 PICASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCG 191
++ P + + Y DG SS G L KD F G + ++
Sbjct: 61 --GKGIYTPKSSTTSQNLGTPFYIGYGDGSSSQGTLYKDTVGF---GGASITKQVFADIT 115
Query: 192 YDQVPGASYHPLDGILGLG 210
+P GILG+G
Sbjct: 116 KTSIP-------QGILGIG 127
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L.
pdb|1B5F|C Chain C, Native Cardosin A From Cynara Cardunculus L
Length = 239
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 83 VGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEA----PHPLYRPSN 124
+G PP+ + + DTGS ++W+ P +C+ + H +Y S+
Sbjct: 21 IGTPPQKFTVIFDTGSSVLWV----PSSKCINSKACRAHSMYESSD 62
>pdb|1PPL|E Chain E, Crystallographic Analysis Of Transition-State Mimics Bound
To Penicillopepsin: Phosphorus-Containing Peptide
Analogues
pdb|1PPM|E Chain E, Crystallographic Analysis Of Transition-state Mimics Bound
To Penicillopepsin: Phosphorus-containing Peptide
Analogues
pdb|1APT|E Chain E, Crystallographic Analysis Of A Pepstatin Analogue Binding
To The Aspartyl Proteinase Penicillopepsin At 1.8
Angstroms Resolution
pdb|1APU|E Chain E, Crystallographic Analysis Of A Pepstatin Analogue Binding
To The Aspartyl Proteinase Penicillopepsin At 1.8
Angstroms Resolution
pdb|1APV|E Chain E, Crystallographic Analysis Of Transition State Mimics Bound
To Penicillopepsin: Difluorostatine-And
Difluorostatone-Containing Peptides
pdb|1APW|E Chain E, Crystallographic Analysis Of Transition State Mimics Bound
To Penicillopepsin: Difluorostatine-And
Difluorostatone-Containing Peptides
pdb|1PPK|E Chain E, Crystallographic Analysis Of Transition State Mimics Bound
To Penicillopepsin: Phosphorous-Containing Peptide
Analogues
pdb|1BXO|A Chain A, Acid Proteinase (Penicillopepsin) (E.C.3.4.23.20) Complex
With Phosphonate Inhibitor: Methyl
Cyclo[(2s)-2-[[(1r)-1-(N-(L-N-(3-
Methylbutanoyl)valyl-L-Aspartyl)amino)-3-Methylbut Yl]
Hydroxyphosphinyloxy]-3-(3-Aminomethyl) Phenylpropanoate
pdb|1BXQ|A Chain A, Acid Proteinase (Penicillopepsin) Complex With Phosphonate
Inhibitor.
pdb|2WEA|A Chain A, Acid Proteinase (Penicillopepsin) (E.C.3.4.23.20) Complex
With Phosphonate Inhibitor:
Methyl[cyclo-7[(2r)-((N-Valyl)
Amino)-2-(Hydroxyl-(1s)-1-Methyoxycarbonyl-2-
Phenylethoxy)
Phosphinyloxy-Ethyl]-1-Naphthaleneacetamide], Sodium
Salt
pdb|2WEB|A Chain A, Acid Proteinase (penicillopepsin) (e.c.3.4.23.20) Complex
With Phosphonate Inhibitor:
Methyl(2s)-[1-(((n-formyl)-l-
Valyl)amino-2-(2-naphthyl)ethyl)hydroxyphosphinyloxy]-3-
Phenylpropanoate, Sodium Salt
pdb|2WEC|A Chain A, Acid Proteinase (Penicillopepsin) (E.C.3.4.23.20) Complex
With Phosphonate Inhibitor: Methyl(2s)-[1-(((N-(1-
Naphthaleneacetyl))-L-Valyl)aminomethyl)hydroxy
Phosphinyloxy]-3-Phenylpropanoate, Sodium Salt
pdb|2WED|A Chain A, Acid Proteinase (penicillopepsin) (e.c.3.4.23.20) Complex
With Phosphonate Macrocyclic
Inhibitor:methyl[cyclo-7[(2r)-
((n-valyl)amino)-2-(hydroxyl-(1s)-1-methyoxycarbonyl-2-
Phenylethoxy)phosphinyloxy-ethyl]-1-
naphthaleneacetamide], Sodium Salt
pdb|3APP|A Chain A, Structure And Refinement Of Penicillopepsin At 1.8
Angstroms Resolution
Length = 323
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 376 SNRGNVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMP 422
S G+ CLG I + + +G ++ GDI ++ + V++D++ ++G+ P
Sbjct: 277 SGDGSTCLGGIQSNSGIGF---SIFGDIFLKSQYVVFDSDGPQLGFAP 321
>pdb|2BJU|A Chain A, Plasmepsin Ii Complexed With A Highly Active Achiral
Inhibitor
Length = 453
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 37/184 (20%)
Query: 57 NRVGSSLLFRVQGNVYPTGYYNVTVY----VGQPPKPYFLDLDTGSDLIWLQCDAPCVQC 112
N +GSS N+ + N+ Y VG +P+ LDTGS +W+ P V+C
Sbjct: 121 NYLGSS-----NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWV----PSVKC 171
Query: 113 VEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAF 172
A C + L+ + + + E+ Y G S G KD
Sbjct: 172 TTA------------GC---LTKHLYDSSKSRTYEKDGTKVEMNYVSGTVS-GFFSKDLV 215
Query: 173 AFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKSS------IVSQLHSQKLI 226
+ + G++ AS DGILGLG S IV +L +Q I
Sbjct: 216 TVGNLSLPYKFIEVIDTNGFEPTYTAS--TFDGILGLGWKDLSIGSVDPIVVELKNQNKI 273
Query: 227 RNVV 230
N +
Sbjct: 274 ENAL 277
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution
Length = 320
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 29/133 (21%)
Query: 81 VYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP 140
+Y+G PP+ + + DTGS +W+ PS + C+ +C + H
Sbjct: 17 IYIGTPPQEFTVVFDTGSSDLWV------------------PS---IYCKSNVCKNHHRF 55
Query: 141 GQHKCEDPTQCDYEVEYADG-GSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGA- 198
K + G GS G L D T ++P +G +Q PG
Sbjct: 56 DPRKSSTFRNLGKPLSIHYGTGSMEGFLGYDTV----TVSNIVDPNQTVGLSTEQ-PGEV 110
Query: 199 -SYHPLDGILGLG 210
+Y DGILGL
Sbjct: 111 FTYSEFDGILGLA 123
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At
1.62 Angstroms Resolution
pdb|1AVF|A Chain A, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
pdb|1AVF|J Chain J, Activation Intermediate 2 Of Human Gastricsin From Human
Stomach
Length = 329
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 70/370 (18%), Positives = 136/370 (36%), Gaps = 86/370 (23%)
Query: 81 VYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE---APHPLYRPSNDLVPCEDPICASL 137
+ +G PP+ + + DTGS +W+ P V C H + PS ++
Sbjct: 18 ISIGTPPQNFLVLFDTGSSNLWV----PSVYCQSQACTSHSRFNPSES---------STY 64
Query: 138 HAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYDQVP 196
GQ + ++Y G + F ++ Q + P G ++ P
Sbjct: 65 STNGQ---------TFSLQYGSGS------LTGFFGYDTLTVQSIQVPNQEFGLSENE-P 108
Query: 197 GAS--YHPLDGILGLG-------KGKSSIVSQLHSQKLIRNVVG-----HCXXXXXXXXX 242
G + Y DGI+GL + +++ + L V
Sbjct: 109 GTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVF 168
Query: 243 XXXXXXXXXXRVVWTSMSSDYTKYYSPGVAELFFGGKTTGL--KNLPVVFDSGSSYTYLS 300
++ W ++ + Y+ G+ E GG+ +G + + D+G+S L
Sbjct: 169 GGVDSSLYTGQIYWAPVTQE--LYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTS---LL 223
Query: 301 HVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK 360
V Q ++++++ A +E + L C +++++ +L+F
Sbjct: 224 TVPQQYMSALLQ----ATGAQEDEYGQFLVNC-------NSIQNLP------SLTFIING 266
Query: 361 TRTLFELTTEAYLIISNRGNVCLGI-------LNGAEVGLQDLNVIGDISMQDRVVIYDN 413
F L +Y I+SN G +G+ NG Q L ++GD+ ++ +YD
Sbjct: 267 VE--FPLPPSSY-ILSNNGYCTVGVEPTYLSSQNG-----QPLWILGDVFLRSYYSVYDL 318
Query: 414 EKQRIGWMPA 423
R+G+ A
Sbjct: 319 GNNRVGFATA 328
>pdb|3C9X|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic
Proteinase
pdb|3EMY|A Chain A, Crystal Structure Of Trichoderma Reesei Aspartic
Proteinase Complexed With Pepstatin A
Length = 329
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 8/25 (32%), Positives = 19/25 (76%)
Query: 396 LNVIGDISMQDRVVIYDNEKQRIGW 420
+N+ GD++++ +V++D +R+GW
Sbjct: 302 INIFGDVALKAALVVFDLGNERLGW 326
>pdb|1PFZ|A Chain A, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|B Chain B, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|C Chain C, Proplasmepsin Ii From Plasmodium Falciparum
pdb|1PFZ|D Chain D, Proplasmepsin Ii From Plasmodium Falciparum
Length = 380
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 37/184 (20%)
Query: 57 NRVGSSLLFRVQGNVYPTGYYNVTVY----VGQPPKPYFLDLDTGSDLIWLQCDAPCVQC 112
N +GSS N+ + N+ Y VG +P+ LDTGS +W+ P V+C
Sbjct: 48 NYLGSS-----NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWV----PSVKC 98
Query: 113 VEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAF 172
A C + L+ + + + E+ Y G S G KD
Sbjct: 99 TTA------------GC---LTKHLYDSSKSRTYEKDGTKVEMNYVSGTVS-GFFSKDLV 142
Query: 173 AFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKSS------IVSQLHSQKLI 226
+ + G++ AS DGILGLG S IV +L +Q I
Sbjct: 143 TVGNLSLPYKFIEVIDTNGFEPTYTAS--TFDGILGLGWKDLSIGSVDPIVVELKNQNKI 200
Query: 227 RNVV 230
N +
Sbjct: 201 ENAL 204
>pdb|1J71|A Chain A, Structure Of The Extracellular Aspartic Proteinase From
Candida Tropicalis Yeast
Length = 334
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWL-QCDAPCVQCVEAPHPLYRPSNDLVPCEDPICA 135
Y + VG + + +DTGS +W+ DA C Q + +N+ E
Sbjct: 14 YAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAEC-QVTYSGQ-----TNNFCKQEGTFDP 67
Query: 136 SLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAF 174
S + Q+ +D + +EY D SS G KD F
Sbjct: 68 SSSSSAQNLNQD-----FSIEYGDLTSSQGSFYKDTVGF 101
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin
pdb|3VCM|B Chain B, Crystal Structure Of Human Prorenin
Length = 335
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 14 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 68
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|C Chain C, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|E Chain E, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
pdb|2X0B|G Chain G, Crystal Structure Of Human Angiotensinogen Complexed With
Renin
Length = 383
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 57 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 111
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1HRN|B Chain B, High Resolution Crystal Structures Of Recombinant Human
Renin In Complex With Polyhydroxymonoamide Inhibitors
pdb|1BIM|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIM|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|A Chain A, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|1BIL|B Chain B, Crystallographic Studies On The Binding Modes Of P2-P3
Butanediamide Renin Inhibitors
pdb|3GW5|A Chain A, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3GW5|B Chain B, Crystal Structure Of Human Renin Complexed With A Novel
Inhibitor
pdb|3KM4|A Chain A, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
pdb|3KM4|B Chain B, Optimization Of Orally Bioavailable Alkyl Amine Renin
Inhibitors
Length = 337
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 11 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 65
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX
pdb|2I4Q|B Chain B, Human ReninPF02342674 COMPLEX
Length = 336
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 10 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 64
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKS|B Chain B, Crystal Structure Of Renin-Pf00074777 Complex
pdb|2BKT|A Chain A, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2BKT|B Chain B, Crystal Structure Of Renin-Pf00257567 Complex
pdb|2IKO|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKO|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IKU|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IKU|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitors
pdb|2IL2|A Chain A, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2IL2|B Chain B, Crystal Structure Of Human Renin Complexed With Inhibitor
pdb|2V0Z|C Chain C, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V0Z|O Chain O, Crystal Structure Of Renin With Inhibitor 10 (Aliskiren)
pdb|2V10|C Chain C, Crystal Structure Of Renin With Inhibitor 9
pdb|2V10|O Chain O, Crystal Structure Of Renin With Inhibitor 9
pdb|2V11|C Chain C, Crystal Structure Of Renin With Inhibitor 6
pdb|2V11|O Chain O, Crystal Structure Of Renin With Inhibitor 6
pdb|2V12|C Chain C, Crystal Structure Of Renin With Inhibitor 8
pdb|2V12|O Chain O, Crystal Structure Of Renin With Inhibitor 8
pdb|1BBS|A Chain A, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1BBS|B Chain B, X-Ray Analyses Of Peptide Inhibitor Complexes Define The
Structural Basis Of Specificity For Human And Mouse
Renins
pdb|1RNE|A Chain A, The Crystal Structure Of Recombinant Glycosylated Human
Renin Alone And In Complex With A Transition State
Analog Inhibitor
pdb|2REN|A Chain A, Structure Of Recombinant Human Renin, A Target For
Cardiovascular- Active Drugs, At 2.5 Angstroms
Resolution
pdb|2V13|A Chain A, Crystal Structure Of Renin With Inhibitor 7
pdb|2V16|C Chain C, Crystal Structure Of Renin With Inhibitor 3
pdb|2V16|O Chain O, Crystal Structure Of Renin With Inhibitor 3
pdb|3G72|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G72|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3OQF|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OQF|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazine
Inhibitor Complexes
pdb|3OOT|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OOT|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|A Chain A, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3OQK|B Chain B, Crystal Structure Analysis Of Renin-Indole-Piperazin
Inhibitor Complexes
pdb|3Q3T|A Chain A, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3Q3T|B Chain B, Alkyl Amine Renin Inhibitors: Filling S1 From S3
pdb|3SFC|A Chain A, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3SFC|B Chain B, Structure-Based Optimization Of Potent 4- And
6-Azaindole-3- Carboxamides As Renin Inhibitors
pdb|3Q4B|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q4B|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|A Chain A, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3Q5H|B Chain B, Clinically Useful Alkyl Amine Renin Inhibitors
pdb|3VSW|A Chain A, Human Renin In Complex With Compound 8
pdb|3VSW|B Chain B, Human Renin In Complex With Compound 8
pdb|3VSX|A Chain A, Human Renin In Complex With Compound 18
pdb|3VSX|B Chain B, Human Renin In Complex With Compound 18
pdb|3VYD|A Chain A, Human Renin In Complex With Inhibitor 6
pdb|3VYD|B Chain B, Human Renin In Complex With Inhibitor 6
pdb|3VYE|A Chain A, Human Renin In Complex With Inhibitor 7
pdb|3VYE|B Chain B, Human Renin In Complex With Inhibitor 7
pdb|3VYF|A Chain A, Human Renin In Complex With Inhibitor 9
pdb|3VYF|B Chain B, Human Renin In Complex With Inhibitor 9
pdb|4GJ8|A Chain A, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ8|B Chain B, Crystal Structure Of Renin In Complex With Pkf909-724
(compound 3)
pdb|4GJ9|A Chain A, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJ9|B Chain B, Crystal Structure Of Renin In Complex With Gp055321
(compound 4)
pdb|4GJA|A Chain A, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJA|B Chain B, Crystal Structure Of Renin In Complex With Nvp-ayl747
(compound 5)
pdb|4GJB|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJB|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bbv031
(compound 6)
pdb|4GJC|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJC|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bch965
(compound 9)
pdb|4GJD|A Chain A, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
pdb|4GJD|B Chain B, Crystal Structure Of Renin In Complex With Nvp-bgq311
(compound 12)
Length = 340
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 14 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 68
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren
pdb|3D91|B Chain B, Human Renin In Complex With Remikiren
pdb|3G6Z|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G6Z|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|A Chain A, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3G70|B Chain B, Design And Preparation Of Potent, Non-Peptidic,
Bioavailable Renin Inhibitors
pdb|3K1W|A Chain A, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3K1W|B Chain B, New Classes Of Potent And Bioavailable Human Renin
Inhibitors
pdb|3OWN|A Chain A, Potent Macrocyclic Renin Inhibitors
pdb|3OWN|B Chain B, Potent Macrocyclic Renin Inhibitors
Length = 341
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 14 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 68
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G24|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G26|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G27|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2FS4|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2FS4|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1N|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1N|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1O|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1R|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1R|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1S|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G1Y|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G1Y|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G20|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G20|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
C Ring
pdb|2G21|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G21|B Chain B, Ketopiperazine-Based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|A Chain A, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
pdb|2G22|B Chain B, Ketopiperazine-based Renin Inhibitors: Optimization Of The
"c" Ring
Length = 333
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 7 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 61
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAD|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|A Chain A, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3OAG|C Chain C, Design And Optimization Of New Piperidines As Renin
Inhibitors
pdb|3O9L|A Chain A, Design And Optimisation Of New Piperidines As Renin
Inhibitors
pdb|3O9L|C Chain C, Design And Optimisation Of New Piperidines As Renin
Inhibitors
Length = 166
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 70 NVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWL---QCDAPCVQCVEAPHPLYRPSN 124
N T YY + +G PP+ + + DTGS +W+ +C CV H L+ S+
Sbjct: 14 NYMDTQYYG-EIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASD 68
>pdb|1ER8|E Chain E, The Active Site Of Aspartic Proteinases
pdb|2ER0|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes
pdb|2ER6|E Chain E, The Structure Of A Synthetic Pepsin Inhibitor Complexed
With Endothiapepsin.
pdb|2ER7|E Chain E, X-Ray Analyses Of Aspartic Proteinases.Iii.
Three-Dimensional Structure Of Endothiapepsin Complexed
With A Transition-State Isostere Inhibitor Of Renin At
1.6 Angstroms Resolution
pdb|2ER9|E Chain E, X-Ray Studies Of Aspartic Proteinase-Statine Inhibitor
Complexes.
pdb|3ER3|E Chain E, The Active Site Of Aspartic Proteinases
pdb|3ER5|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER1|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER2|E Chain E, The Active Site Of Aspartic Proteinases
pdb|4ER4|E Chain E, High-Resolution X-Ray Analyses Of Renin Inhibitor-Aspartic
Proteinase Complexes
pdb|5ER1|E Chain E, A Rational Approach To The Design Of Antihypertensives.
X-Ray Studies Of Complexes Between Aspartic Proteinases
And Aminoalcohol Renin Inhibitors
pdb|5ER2|E Chain E, High-Resolution X-Ray Diffraction Study Of The Complex
Between Endothiapepsin And An Oligopeptide Inhibitor.
The Analysis Of The Inhibitor Binding And Description Of
The Rigid Body Shift In The Enzyme
pdb|1EED|P Chain P, X-Ray Crystallographic Analysis Of Inhibition Of
Endothiapepsin By Cyclohexyl Renin Inhibitors
pdb|1ENT|E Chain E, X-Ray Analyses Of Aspartic Proteinases. The
Three-Dimensional Structure At 2.1 Angstroms Resolution
Of Endothiapepsin
pdb|1EPL|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPM|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPN|E Chain E, A Structural Comparison Of 21 Inhibitor Complexes Of The
Aspartic Proteinase From Endothia Parasitica
pdb|1EPO|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Cp-81,282 (Mor Phe Nle Chf Nme)
pdb|1EPP|E Chain E, Endothia Aspartic Proteinase (endothiapepsin) Complexed
With Pd-130, 693 (mas Phe Lys+mtf Sta Mba)
pdb|1EPQ|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-133, 450 (Sot Phe Gly+scc Gcl)
pdb|1E5O|E Chain E, Endothiapepsin Complex With Inhibitor Db2
pdb|1E81|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd61395
pdb|1E82|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd59601
pdb|1E80|E Chain E, Endothiapepsin Complex With Renin Inhibitor
Merck-Kgaa-Emd56133
pdb|1OD1|A Chain A, Endothiapepsin Pd135,040 Complex
pdb|4APE|A Chain A, The Active Site Of Aspartic Proteinases
pdb|2V00|A Chain A, X-Ray Crystal Structure Of Endothiapepsin Complexed With
Compound 1
pdb|3LZY|A Chain A, Crystal Structure Of Endothiapesin In Complex With Xenon
pdb|3PB5|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PBZ|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCW|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PCZ|A Chain A, Endothiapepsin In Complex With Benzamidine
pdb|3PGI|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PRS|A Chain A, Endothiapepsin In Complex With Ritonavir
pdb|3PI0|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLD|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PLL|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PM4|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMU|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PMY|A Chain A, Endothiapepsin In Complex With A Fragment
pdb|3PSY|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3PWW|A Chain A, Endothiapepsin In Complex With Saquinavir
pdb|3Q6Y|A Chain A, Endothiapepsin In Complex With A Pyrrolidine Based
Inhibitor
pdb|3T6I|A Chain A, Endothiapepsin In Complex With An Azepin Derivative
pdb|3T7P|A Chain A, Endothiapepsin In Complex With A Hydrazide Derivative
pdb|3T7Q|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
pdb|3T7X|A Chain A, Endothiapepsin In Complex With An Inhibitor Based On The
Gewald Reaction
Length = 330
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPS 123
Y V +G P + LD DTGS +W+ V+ +Y PS
Sbjct: 17 YITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDG-QTIYTPS 62
>pdb|1EPR|E Chain E, Endothia Aspartic Proteinase (Endothiapepsin) Complexed
With Pd-135, 040
Length = 330
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPS 123
Y V +G P + LD DTGS +W+ V+ +Y PS
Sbjct: 17 YITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDG-QTIYTPS 62
>pdb|1GVT|A Chain A, Endothiapepsin Complex With Cp-80,794
pdb|1GVU|A Chain A, Endothiapepsin Complex With H189
pdb|1GVV|A Chain A, Five Atomic Resolution Structures Of Endothiapepsin
Inhibitor Complexes; Implications For The Aspartic
Proteinase Mechanism
pdb|1GVW|A Chain A, Endothiapepsin Complex With Pd-130,328
pdb|1GVX|A Chain A, Endothiapepsin Complexed With H256
pdb|1OEX|A Chain A, Atomic Resolution Structure Of Endothiapepsin In Complex
With A Hydroxyethylene Transition State Analogue
Inhibitor H261
pdb|2JJI|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2JJJ|A Chain A, Endothiapepsin In Complex With A Gem-Diol Inhibitor.
pdb|2VS2|A Chain A, Neutron Diffraction Structure Of Endothiapepsin In Complex
With A Gem- Diol Inhibitor.
pdb|3URJ|A Chain A, Type Iv Native Endothiapepsin
pdb|3URI|A Chain A, Endothiapepsin-Db5 Complex.
pdb|3URL|A Chain A, Endothiapepsin-Db6 Complex.
pdb|1OEW|A Chain A, Atomic Resolution Structure Of Native Endothiapepsin
Length = 329
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPS 123
Y V +G P + LD DTGS +W+ E +Y PS
Sbjct: 17 YITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTAS--EVXQTIYTPS 61
>pdb|1GKT|A Chain A, Neutron Laue Diffraction Structure Of Endothiapepsin
Complexed With Transition State Analogue Inhibitor H261
Length = 329
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPS 123
Y V +G P + LD DTGS +W+ E +Y PS
Sbjct: 17 YITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTAS--EVXQTIYTPS 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,665,140
Number of Sequences: 62578
Number of extensions: 527165
Number of successful extensions: 1164
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1132
Number of HSP's gapped (non-prelim): 62
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)