Query 013772
Match_columns 436
No_of_seqs 299 out of 1409
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:49:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 3.5E-62 1.2E-66 484.0 29.9 351 60-428 6-409 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 3.1E-58 1E-62 456.3 32.4 347 61-431 8-400 (403)
3 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-57 5E-62 443.5 29.9 314 65-432 15-350 (351)
4 1t6e_X Xylanase inhibitor; two 100.0 1.6E-57 5.5E-62 447.9 29.3 339 62-425 2-374 (381)
5 2apr_A Rhizopuspepsin; hydrola 100.0 2.6E-57 9E-62 437.1 28.5 299 73-424 13-324 (325)
6 1j71_A Candidapepsin, aspartic 100.0 1.1E-57 3.8E-62 441.5 25.9 311 62-433 2-333 (334)
7 2x0b_A Renin; hydrolase-hormon 100.0 8.4E-58 2.9E-62 448.0 24.4 308 62-424 50-383 (383)
8 3psg_A Pepsinogen; hydrolase(a 100.0 1.6E-57 5.4E-62 445.2 26.1 309 63-424 46-370 (370)
9 1mpp_A Pepsin; hydrolase(acid 100.0 5.9E-57 2E-61 441.2 28.8 321 61-430 6-361 (361)
10 2qzx_A Candidapepsin-5; aspart 100.0 3.4E-57 1.2E-61 439.7 26.5 313 63-434 3-341 (342)
11 3fv3_A SAPP1P-secreted asparti 100.0 8.3E-57 2.8E-61 436.7 29.2 310 62-433 2-338 (339)
12 1am5_A Pepsin, acid proteinase 100.0 9.6E-57 3.3E-61 433.3 29.1 306 63-424 2-324 (324)
13 3c9x_A Trichoderma reesei aspa 100.0 1.3E-56 4.4E-61 433.0 28.0 301 72-423 12-329 (329)
14 1dpj_A Proteinase A; proteinas 100.0 9.5E-57 3.3E-61 434.2 26.8 306 64-424 4-329 (329)
15 3pvk_A Candidapepsin-2; hydrol 100.0 1E-56 3.4E-61 436.7 25.7 310 63-434 3-341 (342)
16 3cms_A Chymosin B; hydrolase, 100.0 1.5E-56 5.1E-61 431.6 25.4 304 63-424 4-323 (323)
17 4aa9_A Chymosin; hydrolase, as 100.0 5.8E-57 2E-61 434.3 22.4 304 65-424 3-320 (320)
18 1oew_A Endothiapepsin; hydrola 100.0 2.8E-56 9.6E-61 430.6 26.4 299 73-423 13-329 (329)
19 1htr_B Gastricsin; aspartyl pr 100.0 2.1E-56 7.2E-61 431.8 23.9 299 73-424 10-329 (329)
20 3k1w_A Renin; protease, altern 100.0 1.6E-55 5.3E-60 428.1 24.1 311 60-425 5-341 (341)
21 1miq_A Plasmepsin; aspartic pr 100.0 1.2E-55 4E-60 432.7 22.2 303 63-424 52-374 (375)
22 1ibq_A Aspergillopepsin; aspar 100.0 1.2E-54 4E-59 418.6 28.8 298 73-424 12-325 (325)
23 1izd_A Aspartic proteinase; su 100.0 3.6E-55 1.2E-59 421.6 24.5 297 73-424 13-323 (323)
24 1yg9_A Aspartic protease BLA G 100.0 2.4E-55 8.1E-60 424.1 22.2 302 65-424 9-329 (330)
25 2ewy_A Beta-secretase 2; BACE2 100.0 5.1E-54 1.7E-58 423.8 29.6 312 74-428 12-359 (383)
26 1bxo_A Protein (penicillopepsi 100.0 7.9E-55 2.7E-59 419.4 22.5 295 73-424 13-323 (323)
27 2bju_A Plasmepsin II; aspartic 100.0 1.1E-54 3.7E-59 432.6 22.9 303 63-424 128-450 (453)
28 2qp8_A Beta-secretase 1; BACE1 100.0 1.7E-53 5.7E-58 421.6 29.6 311 74-428 20-371 (395)
29 3lpj_A Beta-secretase 1; alzhe 100.0 1E-53 3.6E-58 430.1 27.8 315 74-429 73-425 (455)
30 3qvc_A Histo-aspartic protease 100.0 1.5E-54 5E-59 432.3 21.3 303 63-424 127-449 (451)
31 1qdm_A Prophytepsin; aspartic 100.0 9.8E-54 3.4E-58 430.1 27.4 325 63-423 42-477 (478)
32 3vf3_A Beta-secretase 1; struc 100.0 2.8E-53 9.7E-58 421.0 29.8 319 74-431 27-381 (402)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.5E-53 1.2E-57 411.1 27.4 301 64-429 4-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 6.6E-42 2.3E-46 314.8 18.4 219 64-313 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 4.5E-38 1.5E-42 290.1 19.6 220 180-424 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 5.1E-21 1.8E-25 148.8 9.6 88 64-175 4-95 (97)
37 1b5f_B Protein (cardosin A); h 99.7 1.4E-16 4.7E-21 121.7 8.3 73 348-424 12-87 (87)
38 2i1a_A DNA damage-inducible pr 92.2 0.39 1.3E-05 39.2 7.3 27 396-422 109-135 (148)
39 3s8i_A Protein DDI1 homolog 1; 91.7 0.33 1.1E-05 39.8 6.2 28 396-423 108-135 (148)
40 1fmb_A EIAV protease; hydrolas 83.7 1.1 3.9E-05 34.1 4.1 26 77-104 9-34 (104)
41 2hs1_A HIV-1 protease; ultra-h 83.4 1.3 4.3E-05 33.4 4.2 27 78-106 10-36 (99)
42 2i1a_A DNA damage-inducible pr 82.0 1.2 4.1E-05 36.2 4.0 32 73-106 23-54 (148)
43 3liy_A Protease; hydrolase, hy 80.3 1.7 5.7E-05 33.5 3.8 29 78-106 12-43 (116)
44 3ec0_A Protease; HIV-2, inhibi 79.2 2 6.8E-05 32.3 3.9 27 78-106 10-36 (99)
45 2hah_A Protease, retropepsin; 73.5 3.2 0.00011 32.2 3.8 24 81-106 18-41 (116)
46 3s8i_A Protein DDI1 homolog 1; 72.2 3.3 0.00011 33.7 3.9 31 74-106 22-52 (148)
47 3sqf_A Protease; folded monome 69.5 5.1 0.00017 30.9 4.1 27 78-106 11-37 (114)
48 3slz_A GAG-Pro-POL polyprotein 59.8 8.8 0.0003 30.5 3.9 29 76-106 22-50 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 53.7 12 0.0004 32.1 3.9 28 77-106 9-36 (203)
50 2rsp_A RSV protease; hydrolase 49.8 13 0.00045 29.1 3.3 20 87-106 29-48 (124)
51 1b5f_A Protein (cardosin A); h 40.8 35 0.0012 29.8 5.2 31 76-106 189-227 (239)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.6 45 0.0015 28.5 3.9 28 77-106 113-140 (203)
53 3c9x_A Trichoderma reesei aspa 29.4 40 0.0014 31.0 3.8 32 75-106 193-230 (329)
54 1lya_B Cathepsin D; lysosomal 28.7 49 0.0017 28.6 4.1 31 76-106 100-137 (241)
55 1mpp_A Pepsin; hydrolase(acid 27.1 61 0.0021 30.1 4.7 44 251-302 4-49 (361)
56 1qdm_A Prophytepsin; aspartic 25.5 77 0.0026 30.9 5.2 31 76-106 232-270 (478)
57 2apr_A Rhizopuspepsin; hydrola 24.2 65 0.0022 29.5 4.2 31 76-106 194-229 (325)
58 1bxo_A Protein (penicillopepsi 24.2 80 0.0027 28.8 4.9 31 76-106 190-224 (323)
59 3cms_A Chymosin B; hydrolase, 24.0 70 0.0024 29.1 4.4 42 253-302 2-45 (323)
60 1oew_A Endothiapepsin; hydrola 23.5 84 0.0029 28.7 4.8 31 76-106 193-229 (329)
61 1yg9_A Aspartic protease BLA G 22.6 37 0.0013 31.3 2.2 32 75-106 193-230 (330)
62 1ibq_A Aspergillopepsin; aspar 22.3 88 0.003 28.5 4.7 31 76-106 189-225 (325)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3.5e-62 Score=483.98 Aligned_cols=351 Identities=22% Similarity=0.395 Sum_probs=282.2
Q ss_pred CcceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 013772 60 GSSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHA 139 (436)
Q Consensus 60 ~~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~ 139 (436)
.+.+.+|++++. .++.|+++|+||||||++.|+|||||+++||+|. +|. ....|. .++|.++.|...+.
T Consensus 6 ~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c~-----~Sst~~----~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 6 PSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QNY-----VSSTYR----PVRCRTSQCSLSGS 74 (413)
T ss_dssp CSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SSC-----CCTTCE----ECBTTSHHHHHTTC
T ss_pred CccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CCC-----CCCCcC----ccCCCccccccccc
Confidence 577889999974 7899999999999999999999999999999987 662 122233 38999999998776
Q ss_pred CCCCC--------CCCCCCCeeeeee-CCCceEEEEEEEEEEEeecCCCC-----cCCCceEEeeeeecC-CCCCCCCCc
Q 013772 140 PGQHK--------CEDPTQCDYEVEY-ADGGSSLGVLVKDAFAFNYTNGQ-----RLNPRLALGCGYDQV-PGASYHPLD 204 (436)
Q Consensus 140 ~~~~~--------c~~~~~~~~~~~Y-~~Gs~~~G~~~~D~v~~~~~~g~-----~~~~~~~Fg~~~~~~-~~~~~~~~~ 204 (436)
+.+.. |. ++.|.|.+.| ++|+.+.|.+++|+|+|+..+|. ..++++.|||++.+. .+ .....+
T Consensus 75 ~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~d 152 (413)
T 3vla_A 75 IACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVV 152 (413)
T ss_dssp CEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCC
T ss_pred CCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccc
Confidence 54332 33 2579999999 58889999999999999765443 467899999998751 23 245789
Q ss_pred eeeeecCCCCcHHHHhhhccccceeeEEEeCC--CCCceEEeCCCCC-------CCCC-cEEEEcccCC-----------
Q 013772 205 GILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--RGGGFLFFGDDLY-------DSSR-VVWTSMSSDY----------- 263 (436)
Q Consensus 205 GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~--~~~G~l~fG~~~~-------~~~~-~~~~p~~~~~----------- 263 (436)
||||||++++|++.||.+++.++++||+||.+ +..|.|+||+.+. +.++ +.|+|++.++
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~ 232 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGE 232 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccC
Confidence 99999999999999999999889999999985 4679999998753 3567 9999999753
Q ss_pred -CCceeeEeeEEEECCEEeccC----------CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCcc
Q 013772 264 -TKYYSPGVAELFFGGKTTGLK----------NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLC 332 (436)
Q Consensus 264 -~~~~~v~l~~i~v~g~~i~~~----------~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C 332 (436)
..+|.|.+++|+||++.+.++ ...+||||||++++||+++|++|.++|.+++....+++......++.|
T Consensus 233 ~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C 312 (413)
T 3vla_A 233 PSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGAC 312 (413)
T ss_dssp CCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCE
T ss_pred CCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcce
Confidence 269999999999999998764 368999999999999999999999999998753223333334456789
Q ss_pred ccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEE
Q 013772 333 WKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYD 412 (436)
Q Consensus 333 ~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD 412 (436)
++...... ...+..+|+|+|+|+++ ++.|+|++++|+++..++..|++++..... ..+.||||+.|||++|+|||
T Consensus 313 ~~~~~~~~--~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvfD 387 (413)
T 3vla_A 313 FSTDNILS--TRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQFD 387 (413)
T ss_dssp EECTTCCE--ETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHHTTEEEEEE
T ss_pred eccCCccc--cccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhhcCeEEEEE
Confidence 97643100 01224689999999963 389999999999987677899999875421 23689999999999999999
Q ss_pred CCCCEEEEEeC------CCCCC
Q 013772 413 NEKQRIGWMPA------NCDRI 428 (436)
Q Consensus 413 ~~~~riGfa~~------~c~~~ 428 (436)
++++|||||++ .|++.
T Consensus 388 ~~~~riGfa~~~~~~~~~c~~~ 409 (413)
T 3vla_A 388 LATSRVGFSGTLLGSRTTCANF 409 (413)
T ss_dssp TTTTEEEEEEEGGGGTCCGGGS
T ss_pred CCCCEEEEEEecccCcccccCc
Confidence 99999999996 56664
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.1e-58 Score=456.31 Aligned_cols=347 Identities=18% Similarity=0.354 Sum_probs=267.2
Q ss_pred cceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 61 SSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 61 ~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
+.+.+||.++. .++.|+++|.||||+|++.|+|||||+++||+|. +|. ....|. .++|.++.|...+.+
T Consensus 8 ~~~~~pl~~~~-~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~~-----~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQNDG-STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQY-----SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SCC-----CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecCC-CCceEEEEEECCCCCceeEEEEECCCCceeECCC-CCC-----CCCCCC----ccCCCCccccCcccc
Confidence 45678999653 6789999999999999999999999999999987 652 122233 379999999887655
Q ss_pred CC--------CCCCCCCCCeeeeeeC-CCceEEEEEEEEEEEeecCCCC-------cCCCceEEeeeeecCCC-CCCCCC
Q 013772 141 GQ--------HKCEDPTQCDYEVEYA-DGGSSLGVLVKDAFAFNYTNGQ-------RLNPRLALGCGYDQVPG-ASYHPL 203 (436)
Q Consensus 141 ~~--------~~c~~~~~~~~~~~Y~-~Gs~~~G~~~~D~v~~~~~~g~-------~~~~~~~Fg~~~~~~~~-~~~~~~ 203 (436)
.+ ..|.. ..|.|.+.|+ ||+.+.|.+++|+|+|+..+|. ..++++.|||++..... +.....
T Consensus 77 ~c~~c~~~~~s~~~~-~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 77 QCLSCPAASRPGCHK-NTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CEEECSSSCBTTBCS-SEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred CccccCCCCCCCCCC-CcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 21 23432 5799999998 7889999999999999764332 56789999999875212 334578
Q ss_pred ceeeeecCCCCcHHHHhhhccccceeeEEEeCC--CCCceEEeCCCC-CC--C-C-----CcEEEEcccCCCCceeeEee
Q 013772 204 DGILGLGKGKSSIVSQLHSQKLIRNVVGHCLSG--RGGGFLFFGDDL-YD--S-S-----RVVWTSMSSDYTKYYSPGVA 272 (436)
Q Consensus 204 ~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~l~~--~~~G~l~fG~~~-~~--~-~-----~~~~~p~~~~~~~~~~v~l~ 272 (436)
+||||||++.++++.||+++.+.+++||+||.+ ...|.|+||+.. ++ . | ++.|+|++.++..+|.|.++
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~ 235 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVN 235 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEE
Confidence 999999999999999997654448999999985 568999999821 23 3 4 99999999765579999999
Q ss_pred EEEECCEEe-ccCC----------CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCc
Q 013772 273 ELFFGGKTT-GLKN----------LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKN 341 (436)
Q Consensus 273 ~i~v~g~~i-~~~~----------~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 341 (436)
+|+|+++.+ .++. ..+||||||++++||+++|++|.++|.+++.. ++.......+..|+....
T Consensus 236 ~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c~~---- 309 (403)
T 3aup_A 236 SIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNSNK---- 309 (403)
T ss_dssp EEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECGGG----
T ss_pred EEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEECCC----
Confidence 999999988 5432 35999999999999999999999999876542 122111122345764321
Q ss_pred ccccccccceEEEEEeCCCcceEEEEcCceeEEEeCCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEE-
Q 013772 342 VRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGW- 420 (436)
Q Consensus 342 ~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGf- 420 (436)
...+|+|+|+|+++ +++.|+|++++|+++..++..|++|+..... ..+.||||+.|||++|+|||++++||||
T Consensus 310 ----~~~~P~i~f~f~g~-~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~-~~~~~ILG~~fl~~~yvvfD~~~~rIGf~ 383 (403)
T 3aup_A 310 ----INAYPSVDLVMDKP-NGPVWRISGEDLMVQAQPGVTCLGVMNGGMQ-PRAEITLGARQLEENLVVFDLARSRVGFS 383 (403)
T ss_dssp ----CCCCCCEEEEESST-TCCEEEECHHHHEEEC---CEEECEEECCSC-CSSSEEECHHHHTTSCEEEETTTTEEEEE
T ss_pred ----cCcCCcEEEEEcCC-CceEEEEcccceEEEcCCCeEEEEEEcCCCC-CCCcEEEChHHhcCeEEEEECCCCEEEEe
Confidence 12589999999972 0169999999999986656799998876521 2358999999999999999999999999
Q ss_pred ------EeCCCCCCccc
Q 013772 421 ------MPANCDRIPKS 431 (436)
Q Consensus 421 ------a~~~c~~~~~~ 431 (436)
++++|++..+.
T Consensus 384 A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 384 TSSLHSHGVKCADLFNF 400 (403)
T ss_dssp SSCGGGGTCCGGGSCCT
T ss_pred cccccccCCCccccccc
Confidence 66788876654
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-57 Score=443.51 Aligned_cols=314 Identities=20% Similarity=0.337 Sum_probs=249.9
Q ss_pred EEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772 65 FRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAPGQ 142 (436)
Q Consensus 65 ~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~ 142 (436)
+||.+ +.+..|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|. +++.
T Consensus 15 ~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~~------ 77 (351)
T 1tzs_A 15 EPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS------TYSQ------ 77 (351)
T ss_dssp CTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCBC------
T ss_pred eecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc------ceEE------
Confidence 45553 35678999999999999999999999999999998 997 676 46789998872 2222
Q ss_pred CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------
Q 013772 143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------ 214 (436)
Q Consensus 143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------ 214 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..+.++.|||++.. .+ +.....+||||||++..
T Consensus 78 ------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~ 145 (351)
T 1tzs_A 78 ------PGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTE-PGQTFVDAEFDGILGLGYPSLAVGGVT 145 (351)
T ss_dssp ------CSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSC-CCGGGGGCSCSEEEECSCGGGSGGGCC
T ss_pred ------CCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEec-cccccccCCCceEEecCCccccccCCC
Confidence 468999999999 5899999999999 5677889999999875 44 33457899999999864
Q ss_pred cHHHHhhhcccc-ceeeEEEeCCCC----CceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEec-cCCC
Q 013772 215 SIVSQLHSQKLI-RNVVGHCLSGRG----GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTG-LKNL 286 (436)
Q Consensus 215 s~~~ql~~~g~i-~~~Fs~~l~~~~----~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~-~~~~ 286 (436)
+++++|++||+| +++||+||.+.. .|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+. ....
T Consensus 146 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~ 223 (351)
T 1tzs_A 146 PVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK--QAYWQIALDNIQVGGTVMFCSEGC 223 (351)
T ss_dssp CHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE--ETTEEEEEEEEEETTEEEECTTCE
T ss_pred cHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC--CceEEEEeCEEEECCceEEcCCCc
Confidence 488999999999 899999998542 7999999875 4679999999985 3899999999999998853 3356
Q ss_pred CEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEE
Q 013772 287 PVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFE 366 (436)
Q Consensus 287 ~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~ 366 (436)
.+||||||++++||++++++|.+++.+... . ..+..+|+... .+|+|+|+|+| .+|+
T Consensus 224 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~---g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~ 280 (351)
T 1tzs_A 224 QAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D---GEYAVECANLN-----------VMPDVTFTING----VPYT 280 (351)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S---SSEEECGGGGG-----------GSCCEEEEETT----EEEE
T ss_pred eEEeccCCcceeCCHHHHHHHHHHhCCccc-----C---CeEEEeCCCCc-----------cCCcEEEEECC----EEEE
Confidence 899999999999999999999999855321 1 22233597532 47999999975 9999
Q ss_pred EcCceeEEEeCC--CeEEE-EEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCcccc
Q 013772 367 LTTEAYLIISNR--GNVCL-GILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSK 432 (436)
Q Consensus 367 i~~~~y~~~~~~--~~~Cl-~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~ 432 (436)
|++++|+++..+ +..|+ +|...... ...+.||||+.|||++|+|||++++|||||+++|...+++|
T Consensus 281 i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s~~~~~ 350 (351)
T 1tzs_A 281 LSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWSHPQFE 350 (351)
T ss_dssp ECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--------
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcccchhhc
Confidence 999999986532 35797 67764321 12468999999999999999999999999999999888776
No 4
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.6e-57 Score=447.88 Aligned_cols=339 Identities=20% Similarity=0.337 Sum_probs=263.1
Q ss_pred ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772 62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPG 141 (436)
Q Consensus 62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~ 141 (436)
.+.+|++.+ +.+..|+++|+|||| |+|||||+++||+|. +|. .|.+ ++|.++.|...+.+.
T Consensus 2 ~~~~pv~~~-~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~~----~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVTKD-PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPAE----IPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEEEC-TTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCCC----CBTTSHHHHHHHSSC
T ss_pred ceEEeEEec-CCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCCc----cCCCCchhccccCCC
Confidence 356788865 468899999999998 999999999999987 542 1332 889999998765554
Q ss_pred CCCCCC--------CCCC-eeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCce----EEeeeeecC-CCCCCCCCceee
Q 013772 142 QHKCED--------PTQC-DYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRL----ALGCGYDQV-PGASYHPLDGIL 207 (436)
Q Consensus 142 ~~~c~~--------~~~~-~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~----~Fg~~~~~~-~~~~~~~~~GIl 207 (436)
..+|.. +..| .|.+.|++|+.++|.+++|+|+|+..+|...++++ .|||++.+. .++ ....+|||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIl 141 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVA 141 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEE
Confidence 456653 1456 59999999987899999999999764444455554 579998741 222 46789999
Q ss_pred eecCCCCcHHHHhhhccccceeeEEEeCCCCCceEEeCCCCC----CCCCcEEEEcccCC-CCceeeEeeEEEECCEEec
Q 013772 208 GLGKGKSSIVSQLHSQKLIRNVVGHCLSGRGGGFLFFGDDLY----DSSRVVWTSMSSDY-TKYYSPGVAELFFGGKTTG 282 (436)
Q Consensus 208 GLg~~~~s~~~ql~~~g~i~~~Fs~~l~~~~~G~l~fG~~~~----~~~~~~~~p~~~~~-~~~~~v~l~~i~v~g~~i~ 282 (436)
|||+++++++.||+++++++++||+||.+...|.|+||+.+. +.+++.|+|++.++ ..+|.|.+++|+|+++.+.
T Consensus 142 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~ 221 (381)
T 1t6e_X 142 GLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVP 221 (381)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECC
T ss_pred EeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEec
Confidence 999999999999999997799999999976789999998754 36899999998643 2466799999999999886
Q ss_pred cCC-----CCEEEeccccccccCHHHHHHHHHHHHHhhcc-----CCCccC-CCCCCCCccccCCCCCCcccccccccce
Q 013772 283 LKN-----LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSA-----KSLKEA-PEDRTLPLCWKGKRPFKNVRDVKKYFKS 351 (436)
Q Consensus 283 ~~~-----~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~~~~~~~~~~~~~~P~ 351 (436)
++. ..+||||||++++||+++|++|.++|.+++.. ..+.+. .....++.|++...... ......+|+
T Consensus 222 ~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~P~ 299 (381)
T 1t6e_X 222 VPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN--NLGGYAVPN 299 (381)
T ss_dssp CCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE--ETTEECCCC
T ss_pred CCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcc--cccCCcCCe
Confidence 542 57999999999999999999999999987641 112222 12334567986542100 001235899
Q ss_pred EEEEEeCCCcceEEEEcCceeEEEeCCCeEEEEEEeCCcC----CCCCceeeChhhhcceEEEEECCCCEEEEEeCCC
Q 013772 352 LALSFTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAEV----GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANC 425 (436)
Q Consensus 352 i~f~f~~g~~~~~~~i~~~~y~~~~~~~~~Cl~~~~~~~~----~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c 425 (436)
|+|+|+| +++|+|++++|+++..++..|++++..... ...+.||||+.|||++|+|||++++|||||++..
T Consensus 300 i~f~f~g---g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 300 VQLGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp EEEEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred EEEEECC---CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 9999986 499999999999987667899998876521 1125799999999999999999999999999754
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.6e-57 Score=437.07 Aligned_cols=299 Identities=21% Similarity=0.364 Sum_probs=247.9
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD 152 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~ 152 (436)
.+..|+++|+||||+|++.|+|||||+++||+|. +|..| .+.++.|+|++|. +++. ..|.
T Consensus 13 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss------T~~~------------~~~~ 72 (325)
T 2apr_A 13 NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS------TYQA------------DGRT 72 (325)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT------TCEE------------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC------Ceee------------CCCE
Confidence 4669999999999999999999999999999999 99999 6778899998872 2222 3679
Q ss_pred eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCCC-------cHHHHhhhccc
Q 013772 153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKS-------SIVSQLHSQKL 225 (436)
Q Consensus 153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~g~ 225 (436)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.....+.....+||||||++.. +++++|++||+
T Consensus 73 ~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~ 148 (325)
T 2apr_A 73 WSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGL 148 (325)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTS
T ss_pred EEEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHHhcCC
Confidence 9999999988999999999999 567788999999988522233445899999998754 58999999999
Q ss_pred c-ceeeEEEeC---CCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEecccccccc
Q 013772 226 I-RNVVGHCLS---GRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYL 299 (436)
Q Consensus 226 i-~~~Fs~~l~---~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~l 299 (436)
| +++||+||. ....|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|+|++ .+...+..+||||||++++|
T Consensus 149 i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~~~l 226 (325)
T 2apr_A 149 ISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN-SRGWWGITVDRATVGT-STVASSFDGILDTGTTLLIL 226 (325)
T ss_dssp CSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC-TTSSCEEEECEEEETT-EEEECCEEEEECTTCSSEEE
T ss_pred CCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccC-CCCEEEEEEeEEEECC-EecCCCceEEEecCCccEEC
Confidence 9 899999995 3568999999875 5679999999973 3579999999999999 44445678999999999999
Q ss_pred CHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCCC
Q 013772 300 SHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNRG 379 (436)
Q Consensus 300 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~~ 379 (436)
|+++|+++++++.+.+... .. +..+|+. ..+|+|+|+|++ .+++||+++|+++.. +
T Consensus 227 P~~~~~~~~~~~~~~~~~~------g~-~~~~C~~------------~~~p~i~f~f~g----~~~~ip~~~~~~~~~-~ 282 (325)
T 2apr_A 227 PNNIAASVARAYGASDNGD------GT-YTISCDT------------SAFKPLVFSING----ASFQVSPDSLVFEEF-Q 282 (325)
T ss_dssp EHHHHHHHHHHHTCEECSS------SC-EEECSCG------------GGCCCEEEEETT----EEEEECGGGGEEEEE-T
T ss_pred CHHHHHHHHHHHhcccCCC------Ce-EEEECCC------------CCCCcEEEEECC----EEEEECHHHEEEcCC-C
Confidence 9999999999997765421 12 2335863 137999999997 699999999998654 6
Q ss_pred eEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 380 NVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 380 ~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
..|++.+.... .+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 283 GQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp TEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 68976443221 4679999999999999999999999999974
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-57 Score=441.50 Aligned_cols=311 Identities=19% Similarity=0.291 Sum_probs=253.0
Q ss_pred ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCC-CCCCCC-------CCCCCCCCCCCCCCCCCCcc
Q 013772 62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDA-PCVQCV-------EAPHPLYRPSNDLVPCEDPI 133 (436)
Q Consensus 62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~-~c~~C~-------~~~~~~y~p~~S~~~c~s~~ 133 (436)
.+.+||.+. +..|+++|.||||+|++.|+|||||+++||+|.. +|..|. ...++.|+|++|. +
T Consensus 2 ~~~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T 72 (334)
T 1j71_A 2 DVPTTLINE---GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSS------S 72 (334)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCT------T
T ss_pred ceeEEEecC---CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCC------C
Confidence 356788753 5589999999999999999999999999998641 354321 1235678887762 2
Q ss_pred cccCCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC
Q 013772 134 CASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK 213 (436)
Q Consensus 134 c~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~ 213 (436)
++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||++.
T Consensus 73 ~~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~------~~~~GilGLg~~~ 130 (334)
T 1j71_A 73 AQN------------LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT------SVDQGIMGIGFTA 130 (334)
T ss_dssp CEE------------EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE------SSSSCEEECSCGG
T ss_pred ccc------------CCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEec------CCCccEEEEcCCc
Confidence 222 36799999999988999999999999 5677899999999874 3689999999986
Q ss_pred C--------cHHHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEE
Q 013772 214 S--------SIVSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKT 280 (436)
Q Consensus 214 ~--------s~~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~ 280 (436)
. +++.+|++||+| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~ 208 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS--VELRVHLGSINFDGTS 208 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS--SSCEEEEEEEEETTEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC--CeEEEEEeEEEECCEe
Confidence 4 799999999999 8999999985 468999999865 45689999999854 6999999999999998
Q ss_pred eccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCC
Q 013772 281 TGLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK 360 (436)
Q Consensus 281 i~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~ 360 (436)
+.. +..+||||||++++||++++++|.+++.+... .....+.+.+|+. +|.|+|+|++
T Consensus 209 ~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~~~~~~~~~C~~--------------~p~i~f~f~~-- 266 (334)
T 1j71_A 209 VST-NADVVLDSGTTITYFSQSTADKFARIVGATWD-----SRNEIYRLPSCDL--------------SGDAVFNFDQ-- 266 (334)
T ss_dssp EEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-----TTTTEEECSSSCC--------------CSEEEEEEST--
T ss_pred ccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCccc-----CCCceEEEEcCCC--------------CCceEEEEcC--
Confidence 865 36899999999999999999999999976542 1111222256853 5899999964
Q ss_pred cceEEEEcCceeEEEeCCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772 361 TRTLFELTTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA 433 (436)
Q Consensus 361 ~~~~~~i~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~ 433 (436)
+.+++|++++|+++..++..|+..+... +.||||+.|||++|+|||++++|||||+++|++.+++++
T Consensus 267 -g~~~~i~~~~y~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~ 333 (334)
T 1j71_A 267 -GVKITVPLSELILKDSDSSICYFGISRN-----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISA 333 (334)
T ss_dssp -TCEEEEEGGGGEEECSSSSCEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred -CcEEEECHHHheeecCCCCeeEEEEeEC-----CCcEEChHhhccEEEEEECCCCEEEEEecCCCCccceEE
Confidence 4999999999999865555696543322 359999999999999999999999999999999888875
No 7
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=8.4e-58 Score=447.95 Aligned_cols=308 Identities=19% Similarity=0.306 Sum_probs=252.5
Q ss_pred ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccccC
Q 013772 62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV----QCVEAPHPLYRPSNDLVPCEDPICASL 137 (436)
Q Consensus 62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~p~~S~~~c~s~~c~~~ 137 (436)
....||.+ +.+..|+++|+||||||++.|+|||||+++||+|. .|. .|.. ++.|+|++|. +++.
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~~--~~~y~~~~Ss------T~~~- 117 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACVY--HKLFDASDSS------SYKH- 117 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHHT--SCCBCGGGCT------TCEE-
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCcccccC--CCCCCCCCCC------cEEE-
Confidence 34578875 46779999999999999999999999999999999 896 5864 5789998872 3332
Q ss_pred CCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC-
Q 013772 138 HAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS- 214 (436)
Q Consensus 138 ~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~- 214 (436)
..|.|.+.|++| +++|.+++|+|+| |+..++ +.|||++.+ .+ +....+|||||||++..
T Consensus 118 -----------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~-~g~~f~~~~~dGIlGLg~~~~s 179 (383)
T 2x0b_A 118 -----------NGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEM-PALPFMLAEFDGVVGMGFIEQA 179 (383)
T ss_dssp -----------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEEC-CHHHHTTCSSSEEEECSCGGGC
T ss_pred -----------CCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEec-CCcccccCCCceEeccCCCccc
Confidence 467999999999 5999999999999 567778 999999985 44 44567899999999865
Q ss_pred -----cHHHHhhhcccc-ceeeEEEeCCC------CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEE
Q 013772 215 -----SIVSQLHSQKLI-RNVVGHCLSGR------GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKT 280 (436)
Q Consensus 215 -----s~~~ql~~~g~i-~~~Fs~~l~~~------~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~ 280 (436)
+++++|++||+| +++||+||.+. .+|.|+||+.+ ++.+++.|+|+.. ..||.|.+++|.|+++.
T Consensus 180 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~--~~~w~v~l~~i~v~~~~ 257 (383)
T 2x0b_A 180 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK--TGVWQIQMKGVSVGSST 257 (383)
T ss_dssp GGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS--TTSCEEEECEEEESSCC
T ss_pred cCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC--CceEEEEEeEEEeCCce
Confidence 488999999999 89999999853 27999999876 4568999999975 48999999999999987
Q ss_pred ec-cCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCC
Q 013772 281 TG-LKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDG 359 (436)
Q Consensus 281 i~-~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g 359 (436)
+. .....+|+||||+++++|++++++|.+++.+.. . .+.+..+|+... .+|+|+|+|+|
T Consensus 258 ~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-------~-~g~~~v~C~~~~-----------~~P~i~f~~~g- 317 (383)
T 2x0b_A 258 LLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-------R-LFDYVVKCNEGP-----------TLPDISFHLGG- 317 (383)
T ss_dssp CBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-------C-SSCEEEEGGGTT-----------TCCCEEEEETT-
T ss_pred EEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-------c-CCcEEEeccccc-----------cCceEEEEECC-
Confidence 43 345689999999999999999999999986532 1 222334597643 37999999986
Q ss_pred CcceEEEEcCceeEEEeCC--CeEEE-EEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 360 KTRTLFELTTEAYLIISNR--GNVCL-GILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 360 ~~~~~~~i~~~~y~~~~~~--~~~Cl-~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
..|+|++++|+++..+ +..|+ +|...... ...+.||||+.|||++|+|||++++|||||+++
T Consensus 318 ---~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 318 ---KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp ---EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 9999999999987542 45897 67764321 124689999999999999999999999999974
No 8
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.6e-57 Score=445.22 Aligned_cols=309 Identities=20% Similarity=0.385 Sum_probs=251.7
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQ 142 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~ 142 (436)
...||.+ +.+..|+++|+||||||++.|+|||||+++||+|. .|..|....++.|+|++|. ++..
T Consensus 46 ~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss------T~~~------ 110 (370)
T 3psg_A 46 GDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFEA------ 110 (370)
T ss_dssp CCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCEE------
T ss_pred ceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc------CcEE------
Confidence 3455653 46779999999999999999999999999999998 9986555567899998872 2222
Q ss_pred CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------
Q 013772 143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------ 214 (436)
Q Consensus 143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------ 214 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++..
T Consensus 111 ------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~-~~~~~~~~~~dGIlGLg~~~~s~~~~~ 178 (370)
T 3psg_A 111 ------TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETE-PGSFLYYAPFDGILGLAYPSISASGAT 178 (370)
T ss_dssp ------EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSC-CCGGGGGCSCSEEEECSCGGGCGGGCC
T ss_pred ------CCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEee-cccccccCCccceeccCCccccccCCC
Confidence 357899999999 5999999999999 6678899999999886 44 45567899999999864
Q ss_pred cHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEecc-CCCCE
Q 013772 215 SIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGL-KNLPV 288 (436)
Q Consensus 215 s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~-~~~~~ 288 (436)
+++++|++||+| +++||+||.+. .+|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+.. ....+
T Consensus 179 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~--~~w~v~l~~i~v~g~~~~~~~~~~a 256 (370)
T 3psg_A 179 PVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQA 256 (370)
T ss_dssp CHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEE
T ss_pred CHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc--ceeEEEEeEEEECCEEEecCCCceE
Confidence 589999999999 89999999853 58999999875 56799999999854 8999999999999987754 35689
Q ss_pred EEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEc
Q 013772 289 VFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELT 368 (436)
Q Consensus 289 iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~ 368 (436)
|+||||+++++|++++++|.+++.+... . .+.+..+|.... .+|+|+|+|+| ..++|+
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a~~~------~-~g~~~v~C~~~~-----------~lP~i~f~~~g----~~~~l~ 314 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGASEN------S-DGEMVISCSSID-----------SLPDIVFTIDG----VQYPLS 314 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCEECCGGGGG-----------GCCCEEEEETT----EEEEEC
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEECCCcc-----------cCCcEEEEECC----EEEEEC
Confidence 9999999999999999999998865321 1 222344587532 47999999986 999999
Q ss_pred CceeEEEeCCCeEEE-EEEeCCcCC-CCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 369 TEAYLIISNRGNVCL-GILNGAEVG-LQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 369 ~~~y~~~~~~~~~Cl-~~~~~~~~~-~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+++|+++ .++ .|+ ++....... .+..||||++|||++|+|||++++|||||+++
T Consensus 315 ~~~yi~~-~~~-~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 315 PSAYILQ-DDD-SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHHEEE-CSS-CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHHhccc-CCC-EEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 9999998 333 596 565533111 23469999999999999999999999999974
No 9
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=5.9e-57 Score=441.22 Aligned_cols=321 Identities=19% Similarity=0.323 Sum_probs=259.7
Q ss_pred cceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccC
Q 013772 61 SSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV---QCVEAPHPLYRPSNDLVPCEDPICASL 137 (436)
Q Consensus 61 ~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~p~~S~~~c~s~~c~~~ 137 (436)
+...+||.+ +.++.|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|. +++.
T Consensus 6 ~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~- 73 (361)
T 1mpp_A 6 SVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVG--KRFFDPSSSS------TFKE- 73 (361)
T ss_dssp CEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCS--SCCBCGGGCT------TCEE-
T ss_pred ccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCCC--CCcCCCccCC------ceEe-
Confidence 445578885 35779999999999999999999999999999999 998 7875 5789998872 2332
Q ss_pred CCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCC------CCCCCCCceeeeecC
Q 013772 138 HAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVP------GASYHPLDGILGLGK 211 (436)
Q Consensus 138 ~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~------~~~~~~~~GIlGLg~ 211 (436)
..|.|.+.|++|+ +.|.+++|+|+| ++..++++.|||++.... .+.....+||||||+
T Consensus 74 -----------~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~ 137 (361)
T 1mpp_A 74 -----------TDYNLNITYGTGG-ANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAY 137 (361)
T ss_dssp -----------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSC
T ss_pred -----------cCCeEEEEECCce-EEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCC
Confidence 3579999999995 899999999999 567889999999998622 234567899999998
Q ss_pred CC------------CcHHHHhhhcccc-ceeeEEEeCCC-CCceEEeCCCC--CCCCCcEEEEcccCCC--CceeeEeeE
Q 013772 212 GK------------SSIVSQLHSQKLI-RNVVGHCLSGR-GGGFLFFGDDL--YDSSRVVWTSMSSDYT--KYYSPGVAE 273 (436)
Q Consensus 212 ~~------------~s~~~ql~~~g~i-~~~Fs~~l~~~-~~G~l~fG~~~--~~~~~~~~~p~~~~~~--~~~~v~l~~ 273 (436)
+. .+++++|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+..... .+|.|.+++
T Consensus 138 ~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~ 217 (361)
T 1mpp_A 138 PDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTG 217 (361)
T ss_dssp GGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEE
T ss_pred cccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeE
Confidence 74 3577899999999 89999999864 58999999875 4679999999986532 299999999
Q ss_pred EEECCEEecc-CCCCEE-EeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCccccccccc-c
Q 013772 274 LFFGGKTTGL-KNLPVV-FDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYF-K 350 (436)
Q Consensus 274 i~v~g~~i~~-~~~~~i-iDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~-P 350 (436)
|.|+++.+.. ....+| |||||++++||++++++|.+++.+... .. ...+..+|+... .+ |
T Consensus 218 i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~~~-----------~~~p 280 (361)
T 1mpp_A 218 VKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKYQ-----------DSKT 280 (361)
T ss_dssp EEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHHT-----------TCCC
T ss_pred EEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCCcc-----------cCCC
Confidence 9999988743 346899 999999999999999999999866432 11 122334697532 35 9
Q ss_pred eEEEEE--eC-CCcceEEEEcCceeEEEeC-CCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCC
Q 013772 351 SLALSF--TD-GKTRTLFELTTEAYLIISN-RGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANC 425 (436)
Q Consensus 351 ~i~f~f--~~-g~~~~~~~i~~~~y~~~~~-~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c 425 (436)
+|+|+| ++ ++++.+|+|++++|+++.. .+..|+ +|.... .+.||||+.|||++|+|||++++|||||+++|
T Consensus 281 ~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~----~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~ 356 (361)
T 1mpp_A 281 TFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG----GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLAS 356 (361)
T ss_dssp EEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCT
T ss_pred cEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC----CCCEEEChHHhccEEEEEECCCCEEEEEEccc
Confidence 999999 51 0123999999999999865 346896 777642 45799999999999999999999999999999
Q ss_pred CCCcc
Q 013772 426 DRIPK 430 (436)
Q Consensus 426 ~~~~~ 430 (436)
+...+
T Consensus 357 ~~~~~ 361 (361)
T 1mpp_A 357 GYEND 361 (361)
T ss_dssp TTCCC
T ss_pred CCCCC
Confidence 97643
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.4e-57 Score=439.67 Aligned_cols=313 Identities=18% Similarity=0.315 Sum_probs=252.5
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCC-CCCCCC-------CCCCCCCCCCCCCCCCCCccc
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDA-PCVQCV-------EAPHPLYRPSNDLVPCEDPIC 134 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~-~c~~C~-------~~~~~~y~p~~S~~~c~s~~c 134 (436)
+.+|+.+. +..|+++|.||||+|++.|+|||||+++||+|.. +|..|. ...++.|+|++|. ++
T Consensus 3 v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T~ 73 (342)
T 2qzx_A 3 VAVTLHNE---AITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSR------TS 73 (342)
T ss_dssp EEEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCT------TC
T ss_pred eeEEEecC---CeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCC------Cc
Confidence 56777753 5689999999999999999999999999998541 354321 1235678887762 22
Q ss_pred ccCCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCCC
Q 013772 135 ASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKS 214 (436)
Q Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~ 214 (436)
+. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||++..
T Consensus 74 ~~------------~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~------~~~~GilGLg~~~~ 131 (342)
T 2qzx_A 74 QN------------LNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWST------SARKGILGIGFQSG 131 (342)
T ss_dssp EE------------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE------CSSSCEEECSCGGG
T ss_pred cc------------CCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEec------CCCcCEEEEccccc
Confidence 22 36799999999988999999999999 5677899999999874 25899999999754
Q ss_pred --------cHHHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEe
Q 013772 215 --------SIVSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTT 281 (436)
Q Consensus 215 --------s~~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i 281 (436)
+++.+|++||+| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.+
T Consensus 132 ~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 132 EATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE--KKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp CSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETTEEE
T ss_pred cCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC--ceEEEEEeEEEECCEec
Confidence 799999999999 8999999985 467999999864 56799999999854 69999999999999988
Q ss_pred ccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCc
Q 013772 282 GLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKT 361 (436)
Q Consensus 282 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~ 361 (436)
.. +..+||||||++++||++++++|.+++.+... +.......+..+|+. +|.|+|+|++
T Consensus 210 ~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~~~C~~--------------~p~i~f~f~~--- 268 (342)
T 2qzx_A 210 DA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMK---FDSAGNKVYVADCKT--------------SGTIDFQFGN--- 268 (342)
T ss_dssp EE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---ECTTSCEEEEECTTC--------------CCEEEEEETT---
T ss_pred CC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee---eccCCCcEEEEECCC--------------CCcEEEEECC---
Confidence 65 36899999999999999999999999977543 111112122335852 5899999964
Q ss_pred ceEEEEcCceeEEEe-----CCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCcccccc
Q 013772 362 RTLFELTTEAYLIIS-----NRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKAM 434 (436)
Q Consensus 362 ~~~~~i~~~~y~~~~-----~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~~ 434 (436)
+.+|+|++++|+++. +++..|++.+... +.||||+.|||++|+|||++++|||||+++|.+.++|++.
T Consensus 269 g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~-----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~~i~~i 341 (342)
T 2qzx_A 269 NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES-----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTSESDIVAI 341 (342)
T ss_dssp TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC-----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEEC
T ss_pred CcEEEEcHHHhcccccccCCCCCCccEEEEecC-----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCCCCCeEEc
Confidence 499999999999863 2235797544432 3599999999999999999999999999999998888753
No 11
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=8.3e-57 Score=436.65 Aligned_cols=310 Identities=19% Similarity=0.288 Sum_probs=256.8
Q ss_pred ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEe-----cCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 013772 62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQ-----CDAPCVQCVEAPHPLYRPSNDLVPCEDPICAS 136 (436)
Q Consensus 62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~-----~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~ 136 (436)
.+.+|+... ++.|+++|.||||+|++.|+|||||+++||+ |. +|..|.. ++.|+|++|. +++.
T Consensus 2 ~i~~~l~~~---~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~~--~~~y~~~~Ss------T~~~ 69 (339)
T 3fv3_A 2 SISLSLINE---GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCKS--SGTFTPSSSS------SYKN 69 (339)
T ss_dssp CEEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTTT--TCCBCGGGCT------TCEE
T ss_pred ceeeEEEcC---CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCCC--CCcCCCccCc------ceee
Confidence 357788754 4589999999999999999999999999998 65 5667864 6789998872 2222
Q ss_pred CCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCCC--
Q 013772 137 LHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKS-- 214 (436)
Q Consensus 137 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~-- 214 (436)
..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. . ..+||||||++..
T Consensus 70 ------------~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~-~-----~~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 70 ------------LGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQT-S-----VDQGILGIGYTSNEA 127 (339)
T ss_dssp ------------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-S-----SSSCEEECSCGGGCC
T ss_pred ------------CCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEec-C-----CCceeEEecCccccc
Confidence 35799999999999999999999999 5678899999999985 2 3699999999754
Q ss_pred --------------cHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEE
Q 013772 215 --------------SIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELF 275 (436)
Q Consensus 215 --------------s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~ 275 (436)
+|+.+|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~ 205 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS--QALTISLASVN 205 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS--SSCEEEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC--ccEEEEEEEEE
Confidence 389999999999 89999999853 47999999764 56799999999854 69999999999
Q ss_pred ECCEEeccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEE
Q 013772 276 FGGKTTGLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALS 355 (436)
Q Consensus 276 v~g~~i~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~ 355 (436)
|+++.+..+ ..++|||||++++||++++++|.+++.+.... .... ...+..+|+.. .+|+|+|+
T Consensus 206 v~g~~~~~~-~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~--~~~~-~~~~~~~C~~~------------~~p~i~f~ 269 (339)
T 3fv3_A 206 LKGSSFSFG-DGALLDSGTTLTYFPSDFAAQLADKAGARLVQ--VARD-QYLYFIDCNTD------------TSGTTVFN 269 (339)
T ss_dssp ESSCEEEEE-EEEEECTTBSSEEECHHHHHHHHHHHTCEEEE--EETT-EEEEEECTTCC------------CCSEEEEE
T ss_pred ECCEeecCC-ccEEEeCCCCCEecCHHHHHHHHHHcCCEEcc--cccc-CceEEEecCCC------------CCCcEEEE
Confidence 999988763 78999999999999999999999999865431 0011 22233469741 36999999
Q ss_pred EeCCCcceEEEEcCceeEEEeCCCeEE-EEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772 356 FTDGKTRTLFELTTEAYLIISNRGNVC-LGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA 433 (436)
Q Consensus 356 f~~g~~~~~~~i~~~~y~~~~~~~~~C-l~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~ 433 (436)
|++ +.+++|++++|+++..++ .| +++... +.||||+.|||++|+|||++++|||||+++|++.++|+.
T Consensus 270 f~~---g~~~~v~~~~~~~~~~~~-~C~~~i~~~------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~i~~ 338 (339)
T 3fv3_A 270 FGN---GAKITVPNTEYVYQNGDG-TCLWGIQPS------DDTILGDNFLRHAYLLYNLDANTISIAQVKYTTDSSISA 338 (339)
T ss_dssp ETT---SCEEEEEGGGGEEECSSS-CEEESEEEC------SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred ECC---CCEEEECHHHheeeCCCC-eEEEEEEeC------CcEEeChHHHhCEEEEEECCCCEEEEEecCCCCccceEE
Confidence 975 399999999999986444 56 777762 469999999999999999999999999999999888875
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=9.6e-57 Score=433.26 Aligned_cols=306 Identities=21% Similarity=0.432 Sum_probs=252.8
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
+.+||.+ +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|. +++.
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~---- 66 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACSN--HNKFKPRQSS------TYVE---- 66 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHHT--SCCBCGGGCT------TCEE----
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCcccccC--CCcCCCccCC------CeEe----
Confidence 3467775 35779999999999999999999999999999998 897 5754 5789998872 2332
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC----
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS---- 214 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~---- 214 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++..
T Consensus 67 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~ 132 (324)
T 1am5_A 67 --------TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTE-PGPFQAAAPFDGILGLAYPSIAAAG 132 (324)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEEC-CSTTTTTCSSSEEEECSCGGGCGGG
T ss_pred --------CCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEec-ccccccCCCCceEEecCCccccccC
Confidence 357999999999 5699999999999 5678899999999986 43 34567899999999854
Q ss_pred --cHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCC
Q 013772 215 --SIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLP 287 (436)
Q Consensus 215 --s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~ 287 (436)
+++++|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|+|+++.+......
T Consensus 133 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~ 210 (324)
T 1am5_A 133 AVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA--EKYWQVALDGITVNGQTAACEGCQ 210 (324)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE--ETTEEEEECEEEETTEECCCCCEE
T ss_pred CCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC--CcEEEEEEeEEEECCceeeccCce
Confidence 589999999999 89999999854 48999999875 4579999999985 379999999999999886433478
Q ss_pred EEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEE
Q 013772 288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFEL 367 (436)
Q Consensus 288 ~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i 367 (436)
+||||||++++||++++++|.+++.+. . . .+.+..+|+... .+|+|+|+|+| .+++|
T Consensus 211 aiiDSGTt~~~lp~~~~~~l~~~~~~~-~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i 267 (324)
T 1am5_A 211 AIVDTGTSKIVAPVSALANIMKDIGAS-E------N-QGEMMGNCASVQ-----------SLPDITFTING----VKQPL 267 (324)
T ss_dssp EEECTTCSSEEECTTTHHHHHHHHTCE-E------C-CCCEECCTTSSS-----------SSCCEEEEETT----EEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCc-c------c-CCcEEEeCCCcc-----------cCCcEEEEECC----EEEEE
Confidence 999999999999999999999998654 2 1 122334697532 37999999985 99999
Q ss_pred cCceeEEEeCCCeEEE-EEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 368 TTEAYLIISNRGNVCL-GILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 368 ~~~~y~~~~~~~~~Cl-~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
++++|+++. +..|+ ++...... ...+.||||+.|||++|+|||++++|||||+++
T Consensus 268 ~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 268 PPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 999999975 56796 67664321 124689999999999999999999999999974
No 13
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.3e-56 Score=432.99 Aligned_cols=301 Identities=17% Similarity=0.311 Sum_probs=247.1
Q ss_pred cCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCC
Q 013772 72 YPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQC 151 (436)
Q Consensus 72 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~ 151 (436)
+.+..|+++|+||||+|++.|+|||||+++||+|. +|..|..+.++.|+|++|. +|+.+ +.|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~~-----------~~~ 73 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSKKV-----------SGA 73 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCEEC-----------TTC
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------CceEc-----------CCC
Confidence 45678999999999999999999999999999999 9998877778899998872 33332 357
Q ss_pred eeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-C-CCCCCceeeeecCCCC---------cHHHHh
Q 013772 152 DYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-A-SYHPLDGILGLGKGKS---------SIVSQL 220 (436)
Q Consensus 152 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~---------s~~~ql 220 (436)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. .+ + .....+||||||++.. +++++|
T Consensus 74 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 74 SWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRV-STEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp BEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEec-CccccccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 99999999977999999999999 5677899999999985 33 2 1257899999998743 488899
Q ss_pred hhcccc-ceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEecccccc
Q 013772 221 HSQKLI-RNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYT 297 (436)
Q Consensus 221 ~~~g~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~ 297 (436)
+++ | +++||+||.++..|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|.|+++.+...+..+||||||+++
T Consensus 149 ~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 149 ASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDN-SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLL 225 (329)
T ss_dssp HTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBC-TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSE
T ss_pred HHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccC-CCceEEEEEeeEEECCEeccCCCceEEEECCCCcE
Confidence 886 6 8999999997778999999875 5679999999973 35799999999999998776556789999999999
Q ss_pred ccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeC
Q 013772 298 YLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISN 377 (436)
Q Consensus 298 ~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~ 377 (436)
+||++++++|.+++.++.. ... ...+..+|+. .+|+|+|+|+| .+++||+++|++...
T Consensus 226 ~lp~~~~~~i~~~i~~a~~----~~~-~~~~~~~C~~-------------~~P~i~f~f~g----~~~~ip~~~~~~~~~ 283 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQY----DNQ-QEGVVFDCDE-------------DLPSFSFGVGS----STITIPGDLLNLTPL 283 (329)
T ss_dssp EECHHHHHHHHTTCTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECGGGGEEEES
T ss_pred eCCHHHHHHHHHhCCCcEE----cCC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeecc
Confidence 9999999998887743221 111 1222235862 37999999985 999999999998753
Q ss_pred C--CeEEEE-EEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772 378 R--GNVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA 423 (436)
Q Consensus 378 ~--~~~Cl~-~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~ 423 (436)
+ ...|++ +.... ..+.||||+.|||++|+|||++++|||||+.
T Consensus 284 ~~~~~~C~~~i~~~~---~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 284 EEGSSTCFGGLQSSS---GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp STTCSEEEESEEECT---TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCeEEEEEEcCC---CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 2 378976 55543 2468999999999999999999999999974
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9.5e-57 Score=434.22 Aligned_cols=306 Identities=20% Similarity=0.354 Sum_probs=251.0
Q ss_pred EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772 64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQ--CVEAPHPLYRPSNDLVPCEDPICASLHAPG 141 (436)
Q Consensus 64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~--C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~ 141 (436)
.+||.+ +.+..|+++|+||||+|++.|+|||||+++||+|. +|.. |.. ++.|+|++|. +++.
T Consensus 4 ~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~----- 67 (329)
T 1dpj_A 4 DVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFL--HSKYDHEASS------SYKA----- 67 (329)
T ss_dssp EEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHT--SCCBCGGGCT------TCEE-----
T ss_pred ceeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccCC--cCcCCcccCc------CeEE-----
Confidence 456664 34679999999999999999999999999999999 8986 654 5689998872 2222
Q ss_pred CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC-----
Q 013772 142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS----- 214 (436)
Q Consensus 142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~----- 214 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++..
T Consensus 68 -------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~-~~~~f~~~~~~GilGLg~~~~s~~~~ 134 (329)
T 1dpj_A 68 -------NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSE-PGLTFAFGKFDGILGLGYDTISVDKV 134 (329)
T ss_dssp -------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CHHHHTTCSCSEEEECSCGGGCGGGC
T ss_pred -------CCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEec-CccccccCCcceEEEeCCchhhccCC
Confidence 467999999999 8999999999999 5677899999999985 43 33457899999999865
Q ss_pred -cHHHHhhhcccc-ceeeEEEeCCC-----CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCC
Q 013772 215 -SIVSQLHSQKLI-RNVVGHCLSGR-----GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKN 285 (436)
Q Consensus 215 -s~~~ql~~~g~i-~~~Fs~~l~~~-----~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~ 285 (436)
+++.+|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|+|+++.+...+
T Consensus 135 ~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~ 212 (329)
T 1dpj_A 135 VPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR--KAYWEVKFEGIGLGDEYAELES 212 (329)
T ss_dssp CCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEECSS
T ss_pred CCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC--CceEEEEeeeEEECCeEecCCC
Confidence 467899999999 89999999743 36999999876 4568999999975 4899999999999999887667
Q ss_pred CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772 286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF 365 (436)
Q Consensus 286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~ 365 (436)
..+||||||++++||++++++|.+++.+... . ...+..+|+.. ..+|+|+|+|++ .++
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~-----------~~~P~i~f~f~g----~~~ 270 (329)
T 1dpj_A 213 HGAAIDTGTSLITLPSGLAEMINAEIGAKKG------W-TGQYTLDCNTR-----------DNLPDLIFNFNG----YNF 270 (329)
T ss_dssp CEEEECTTCSCEEECHHHHHHHHHHHTCEEC------T-TSSEEECGGGG-----------GGCCCEEEEETT----EEE
T ss_pred ccEEeeCCCCcEECCHHHHHHHHHHhCCccC------C-CCeEEEECCCC-----------CcCCcEEEEECC----EEE
Confidence 8999999999999999999999999864311 1 12222358643 247999999986 999
Q ss_pred EEcCceeEEEeCCCeEEE-EEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 366 ELTTEAYLIISNRGNVCL-GILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 366 ~i~~~~y~~~~~~~~~Cl-~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+|++++|+++.. ..|+ +|...... ...+.||||+.|||++|+|||++++|||||+++
T Consensus 271 ~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 271 TIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 999999999754 5796 67654211 134689999999999999999999999999974
No 15
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-56 Score=436.70 Aligned_cols=310 Identities=21% Similarity=0.324 Sum_probs=252.4
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCC--CC---------CCCCCCCCCCCCCCCCCCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAP--CV---------QCVEAPHPLYRPSNDLVPCED 131 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~--c~---------~C~~~~~~~y~p~~S~~~c~s 131 (436)
+.+|+... ++.|+++|.||||+|++.|+|||||+++||+|. . |. .|. .++.|+|++|.
T Consensus 3 v~~~l~~~---~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~--~~~~y~~~~Ss----- 71 (342)
T 3pvk_A 3 VPVTLHNE---QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCK--QKGTYDPSGSS----- 71 (342)
T ss_dssp EEEEEEEC---SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGG--TTCCBCGGGCT-----
T ss_pred cceEEecC---CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCC--CCCcCCCccCc-----
Confidence 55677653 458999999999999999999999999999865 3 53 454 35678887772
Q ss_pred cccccCCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecC
Q 013772 132 PICASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGK 211 (436)
Q Consensus 132 ~~c~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~ 211 (436)
+++. ..|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. ...+||||||+
T Consensus 72 -T~~~------------~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~------~~~~GilGLg~ 128 (342)
T 3pvk_A 72 -ASQD------------LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDST------SIDQGILGVGY 128 (342)
T ss_dssp -TCEE------------EEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE------SSSSCEEECSC
T ss_pred -ceee------------cCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEcc------CCCccEEEecC
Confidence 2222 35799999999988999999999999 5678899999999885 26899999999
Q ss_pred CC-------CcHHHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCE
Q 013772 212 GK-------SSIVSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGK 279 (436)
Q Consensus 212 ~~-------~s~~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~ 279 (436)
+. .+++.+|++||+| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~ 206 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD--RELRISLGSVEVSGK 206 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS--SSCEEEEEEEEETTE
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc--ceEEEEEeEEEECCE
Confidence 86 4799999999999 8999999975 357999999764 56799999999854 699999999999999
Q ss_pred EeccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCC
Q 013772 280 TTGLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDG 359 (436)
Q Consensus 280 ~i~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g 359 (436)
.+..++..++|||||++++||++++++|.+++.+.... .......+..+|+. .|+|+|+|++
T Consensus 207 ~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~---~~~~~~~~~~~C~~--------------~p~i~f~f~~- 268 (342)
T 3pvk_A 207 TINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ---DSNGNSFYEVDCNL--------------SGDVVFNFSK- 268 (342)
T ss_dssp EEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE---CTTSCEEEEECSCC--------------CSEEEEEEST-
T ss_pred EecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecc---cCCCceEEEEecCC--------------CCceEEEECC-
Confidence 98776678999999999999999999999999765431 11101123445863 4899999985
Q ss_pred CcceEEEEcCceeEEEe--CCC---eEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772 360 KTRTLFELTTEAYLIIS--NRG---NVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA 433 (436)
Q Consensus 360 ~~~~~~~i~~~~y~~~~--~~~---~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~ 433 (436)
+.+++||+++|+++. .++ ..|+ ++... +.||||+.|||++|+|||++++|||||+++|++.+++++
T Consensus 269 --g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~~s~iv~ 340 (342)
T 3pvk_A 269 --NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN------DANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISA 340 (342)
T ss_dssp --TCEEEEEGGGGEEC----------CEEESEEEC------TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCSCCCEEE
T ss_pred --CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC------CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCCCCCEEE
Confidence 389999999999863 123 5795 44442 469999999999999999999999999999999888876
Q ss_pred c
Q 013772 434 M 434 (436)
Q Consensus 434 ~ 434 (436)
+
T Consensus 341 i 341 (342)
T 3pvk_A 341 L 341 (342)
T ss_dssp C
T ss_pred e
Confidence 4
No 16
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.5e-56 Score=431.63 Aligned_cols=304 Identities=18% Similarity=0.361 Sum_probs=249.4
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCC--CCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPC--VQCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c--~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
...||.+ +.++.|+++|.||||+|++.|+|||||+++||+|. +| ..|.. ++.|+|++|. +++.
T Consensus 4 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~---- 68 (323)
T 3cms_A 4 ASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACKN--HQRFDPRKSS------TFQN---- 68 (323)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHT--SCCBCGGGCT------TCEE----
T ss_pred ceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCcccccC--CCCCCCccCC------CeEE----
Confidence 3467774 35679999999999999999999999999999998 89 46864 5689998872 2332
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC----
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS---- 214 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~---- 214 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++..
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 69 --------LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQE-PGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp --------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred --------CCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEec-ccccccccCCceEEecCcchhhccC
Confidence 367899999999 5899999999999 5677889999999985 43 23356899999998854
Q ss_pred --cHHHHhhhcccc-ceeeEEEeCCC-CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-CCC
Q 013772 215 --SIVSQLHSQKLI-RNVVGHCLSGR-GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-NLP 287 (436)
Q Consensus 215 --s~~~ql~~~g~i-~~~Fs~~l~~~-~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-~~~ 287 (436)
+++++|++|++| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+..+ ...
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~ 212 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTV--QQYWQFTVDSVTISGVVVACEGGCQ 212 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEESTTCEE
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECcc--CCeEEEEEeeEEECCEEeecCCCcE
Confidence 589999999999 89999999853 45999999876 4568999999975 489999999999999887643 468
Q ss_pred EEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEE
Q 013772 288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFEL 367 (436)
Q Consensus 288 ~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i 367 (436)
+||||||++++||++++++|.+++.+... . ...+..+|+... .+|+|+|+|++ .+++|
T Consensus 213 aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i 270 (323)
T 3cms_A 213 AILDTGTSKLVGPSSDILNIQQAIGATQN------Q-YGEFDIDCDNLS-----------YMPTVVFEING----KMYPL 270 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHHHHTCEEE------T-TTEEEECTTCTT-----------TSCCEEEEETT----EEEEE
T ss_pred EEEecCCccEeCCHHHHHHHHHHhCCeec------C-CCcEEEECCCCc-----------cCceEEEEECC----EEEEE
Confidence 99999999999999999999999864321 1 122234597532 37999999975 99999
Q ss_pred cCceeEEEeCCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 368 TTEAYLIISNRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 368 ~~~~y~~~~~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
++++|+++ ++..|+ +++... ..+.||||+.|||++|+|||++++|||||+++
T Consensus 271 ~~~~y~~~--~~~~C~~~i~~~~---~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 271 TPSAYTSQ--DQGFCTSGFQSEN---HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp CHHHHEEE--ETTEEEESEEEC------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CHHHhccC--CCCEEEEEEEeCC---CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 99999997 456896 577653 24689999999999999999999999999974
No 17
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.8e-57 Score=434.27 Aligned_cols=304 Identities=19% Similarity=0.373 Sum_probs=247.5
Q ss_pred EEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 013772 65 FRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHK 144 (436)
Q Consensus 65 ~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~ 144 (436)
.||.+ +.+..|+++|+||||+|++.|+|||||+++||+|. +|..|....++.|+|++|. +++.
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss------T~~~-------- 65 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS------TFRN-------- 65 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE--------
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc------CeEc--------
Confidence 35553 35778999999999999999999999999999998 8984322346789998872 2222
Q ss_pred CCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC------CcH
Q 013772 145 CEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK------SSI 216 (436)
Q Consensus 145 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~------~s~ 216 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++. .++
T Consensus 66 ----~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 135 (320)
T 4aa9_A 66 ----LGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQ-PGEVFTYSEFDGILGLAYPSLASEYSVPV 135 (320)
T ss_dssp ----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CSHHHHSCCCSEEEECSCGGGSCTTCCCH
T ss_pred ----CCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEc-ccccccccCcccEEecCcccccccCCCCH
Confidence 357899999999 5899999999999 5678899999999986 44 3445689999999874 359
Q ss_pred HHHhhhcccc-ceeeEEEeCC-CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-CCCEEEe
Q 013772 217 VSQLHSQKLI-RNVVGHCLSG-RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-NLPVVFD 291 (436)
Q Consensus 217 ~~ql~~~g~i-~~~Fs~~l~~-~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-~~~~iiD 291 (436)
+++|++||+| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+..+ ...++||
T Consensus 136 ~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~~~iiD 213 (320)
T 4aa9_A 136 FDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTL--QQYWQFTVDSVTINGVAVACVGGCQAILD 213 (320)
T ss_dssp HHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSS--BTTBEEEECEEEETTEEEESTTCEEEEEC
T ss_pred HHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEccc--CCceEEEEeEEEECCEEeccCCCcEEEEE
Confidence 9999999999 8999999996 378999999876 4568999999974 489999999999999987653 4689999
Q ss_pred ccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCce
Q 013772 292 SGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEA 371 (436)
Q Consensus 292 SGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~ 371 (436)
|||++++||++++++|.+++.+... . ...+..+|+... .+|+|+|+|++ .+++|++++
T Consensus 214 sGtt~~~lP~~~~~~i~~~~~~~~~------~-~g~~~~~C~~~~-----------~~p~i~f~f~g----~~~~l~~~~ 271 (320)
T 4aa9_A 214 TGTSVLFGPSSDILKIQMAIGATEN------R-YGEFDVNCGNLR-----------SMPTVVFEING----RDYPLSPSA 271 (320)
T ss_dssp TTCSSEEEEHHHHHHHHHHTTCEEC------T-TSCEEECGGGGG-----------GCCCEEEEETT----EEEEECHHH
T ss_pred CCCCcEECCHHHHHHHHHHhCCccc------C-CCcEEEeCCCCC-----------cCceEEEEECC----EEEEECHHH
Confidence 9999999999999999998855322 1 222334597532 47999999986 999999999
Q ss_pred eEEEeCCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 372 YLIISNRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 372 y~~~~~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
|+.+ ++..|+ ++.... ..+.||||++|||++|+|||++++|||||+++
T Consensus 272 y~~~--~~~~C~~~i~~~~---~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 272 YTSK--DQGFCTSGFQGDN---NSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp HEEE--ETTEEEESEEEET---TCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC--CCCeEEEEEEcCC---CCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9976 446796 576633 24679999999999999999999999999975
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.8e-56 Score=430.64 Aligned_cols=299 Identities=18% Similarity=0.287 Sum_probs=243.4
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD 152 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~ 152 (436)
.++.|+++|.||||+|++.|+|||||+++||+|. +|..|.. .++.|+|++|. +++.+ +.|.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss------T~~~~-----------~~~~ 73 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST------TAKLL-----------SGAT 73 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEEE-----------EEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc------cceec-----------CCCe
Confidence 5668999999999999999999999999999999 9998876 67899998872 23321 2578
Q ss_pred eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-C-CCCCCceeeeecCCCC---------cHHHHhh
Q 013772 153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-A-SYHPLDGILGLGKGKS---------SIVSQLH 221 (436)
Q Consensus 153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~---------s~~~ql~ 221 (436)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. .+ + .....+||||||++.. +++++|+
T Consensus 74 ~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 148 (329)
T 1oew_A 74 WSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKV-SSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAK 148 (329)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHT
T ss_pred EEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEec-CccccccCCCceEEEeccccccccCcCCCCCHHHHHH
Confidence 9999999977999999999999 5678899999999985 33 2 1256899999998753 4888998
Q ss_pred hcccc-ceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccc
Q 013772 222 SQKLI-RNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTY 298 (436)
Q Consensus 222 ~~g~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~ 298 (436)
++ | +++||+||.++..|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|+|+++.+...+..+||||||++++
T Consensus 149 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 225 (329)
T 1oew_A 149 AS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVST-KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLY 225 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBC-TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEE
T ss_pred Hh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccC-CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEE
Confidence 87 6 8999999997778999999875 5679999999973 357999999999999987654457899999999999
Q ss_pred cCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCC
Q 013772 299 LSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNR 378 (436)
Q Consensus 299 lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~ 378 (436)
||++++++|.+++.++.. ... ...+..+|+. .+|+|+|+|++ .+++||+++|++...+
T Consensus 226 lP~~~~~~l~~~i~~a~~----~~~-~g~~~~~C~~-------------~~P~i~f~fgg----~~~~ip~~~~~~~~~~ 283 (329)
T 1oew_A 226 LPATVVSAYWAQVSGAKS----SSS-VGGYVFPCSA-------------TLPSFTFGVGS----ARIVIPGDYIDFGPIS 283 (329)
T ss_dssp ECHHHHHHHHTTSTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESS
T ss_pred CCHHHHHHHHHhCCCcEE----cCC-CCEEEEECCC-------------CCCcEEEEECC----EEEEECHHHeeeeecC
Confidence 999999999887743221 111 1222245862 37999999964 9999999999987532
Q ss_pred --CeEEEE-EEeCCcCCCCCceeeChhhhcceEEEEEC-CCCEEEEEeC
Q 013772 379 --GNVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDN-EKQRIGWMPA 423 (436)
Q Consensus 379 --~~~Cl~-~~~~~~~~~~~~~iLG~~fl~~~yvvfD~-~~~riGfa~~ 423 (436)
...|++ +.... ..+.||||+.|||++|+|||+ +++|||||+.
T Consensus 284 ~~~~~C~~~i~~~~---~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 284 TGSSSCFGGIQSSA---GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp TTCSEEEESEEEST---TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCeEEEEEEeCC---CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 368976 55443 246899999999999999999 9999999974
No 19
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.1e-56 Score=431.82 Aligned_cols=299 Identities=22% Similarity=0.440 Sum_probs=246.2
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCC--CCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCC
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQ--CVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQ 150 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~--C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~ 150 (436)
.+..|+++|.||||+|++.|+|||||+++||+|. +|.. |.. ++.|+|++|. +++. ..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~------------~~ 68 (329)
T 1htr_B 10 MDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACTS--HSRFNPSESS------TYST------------NG 68 (329)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHT--SCCBCGGGCT------TCEE------------EE
T ss_pred cCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccCC--CCcCCCccCC------CeEE------------CC
Confidence 5668999999999999999999999999999998 8974 764 5789998872 2332 35
Q ss_pred CeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------cHHHHhhh
Q 013772 151 CDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------SIVSQLHS 222 (436)
Q Consensus 151 ~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------s~~~ql~~ 222 (436)
|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++.. +++++|++
T Consensus 69 ~~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 69 QTFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENE-PGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp EEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSC-SSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred cEEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEc-cccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 7999999999 5699999999999 5678899999999875 44 33467899999999864 58999999
Q ss_pred cccc-ceeeEEEeCCCC---CceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEec--cCCCCEEEeccc
Q 013772 223 QKLI-RNVVGHCLSGRG---GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTG--LKNLPVVFDSGS 294 (436)
Q Consensus 223 ~g~i-~~~Fs~~l~~~~---~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~--~~~~~~iiDSGT 294 (436)
||+| +++||+||.+.. .|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|+|+++.+. .....+||||||
T Consensus 143 qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGT 220 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ--ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGT 220 (329)
T ss_dssp TTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS--SSSCEEEECEEEETTEECCTTTTCEEEEECTTC
T ss_pred cCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC--CceEEEEEeEEEECCceeeecCCCceEEEecCC
Confidence 9999 899999998643 7999999875 4568999999975 4899999999999998865 234689999999
Q ss_pred cccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEE
Q 013772 295 SYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLI 374 (436)
Q Consensus 295 t~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~ 374 (436)
++++||++++++|.+++.+... . ...+..+|+... .+|+|+|+|++ .+|+|++++|++
T Consensus 221 t~~~lp~~~~~~l~~~~~~~~~------~-~g~~~~~C~~~~-----------~~P~i~f~f~g----~~~~i~~~~y~~ 278 (329)
T 1htr_B 221 SLLTVPQQYMSALLQATGAQED------E-YGQFLVNCNSIQ-----------NLPSLTFIING----VEFPLPPSSYIL 278 (329)
T ss_dssp CSEEEEGGGHHHHHHHHTCEEC------T-TSCEEECGGGGG-----------GSCCEEEEETT----EEEEECHHHHEE
T ss_pred ccEECCHHHHHHHHHHhCCeec------C-CCeEEEeCCCcc-----------cCCcEEEEECC----EEEEECHHHhcc
Confidence 9999999999999999865332 1 122334597532 47999999975 999999999999
Q ss_pred EeCCCeEEE-EEEeCCcC-CCCC-ceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 375 ISNRGNVCL-GILNGAEV-GLQD-LNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 375 ~~~~~~~Cl-~~~~~~~~-~~~~-~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+.. + .|+ ++...... ...+ .||||+.|||++|+|||++++|||||+++
T Consensus 279 ~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 279 SNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 865 4 896 67654311 1234 89999999999999999999999999974
No 20
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-55 Score=428.14 Aligned_cols=311 Identities=18% Similarity=0.309 Sum_probs=254.2
Q ss_pred CcceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccc
Q 013772 60 GSSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV----QCVEAPHPLYRPSNDLVPCEDPICA 135 (436)
Q Consensus 60 ~~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~p~~S~~~c~s~~c~ 135 (436)
.+...+||.+. .+..|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|. +++
T Consensus 5 ~~~~~~~l~n~--~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss------T~~ 73 (341)
T 3k1w_A 5 NTTSSVILTNY--MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYK 73 (341)
T ss_dssp CBCEEEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT------TCE
T ss_pred CCCccccceEc--cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc------Cee
Confidence 34567788853 5779999999999999999999999999999998 897 575 45789998872 222
Q ss_pred cCCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC
Q 013772 136 SLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK 213 (436)
Q Consensus 136 ~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~ 213 (436)
. ..|.|.+.|++| ++.|.+++|+|+| ++..+ ++.|||++.. .+ +.....+||||||++.
T Consensus 74 ~------------~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~ 134 (341)
T 3k1w_A 74 H------------NGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEM-PALPFMLAEFDGVVGMGFIE 134 (341)
T ss_dssp E------------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEEC-CHHHHTTCSSSEEEECSCGG
T ss_pred E------------CCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEc-cccccccCCcceEEECCchh
Confidence 2 467999999999 5999999999999 56777 9999999986 33 3456689999999986
Q ss_pred C------cHHHHhhhcccc-ceeeEEEeCCCC------CceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECC
Q 013772 214 S------SIVSQLHSQKLI-RNVVGHCLSGRG------GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGG 278 (436)
Q Consensus 214 ~------s~~~ql~~~g~i-~~~Fs~~l~~~~------~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g 278 (436)
. +++++|++||+| +++||+||.+.. .|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|++
T Consensus 135 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~ 212 (341)
T 3k1w_A 135 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK--TGVWQIQMKGVSVGS 212 (341)
T ss_dssp GCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS--TTSCEEEECCEEETT
T ss_pred hcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC--CCEEEEEEeEEEECC
Confidence 5 489999999999 899999998643 8999999875 4568999999974 489999999999999
Q ss_pred EEecc-CCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEe
Q 013772 279 KTTGL-KNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFT 357 (436)
Q Consensus 279 ~~i~~-~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~ 357 (436)
+.+.. ....++|||||++++||++++++|.+++.+... . .+ +..+|... ..+|+|+|+|+
T Consensus 213 ~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~------~-~g-~~~~C~~~-----------~~~p~i~f~f~ 273 (341)
T 3k1w_A 213 STLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR------L-FD-YVVKCNEG-----------PTLPDISFHLG 273 (341)
T ss_dssp EEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC------S-SC-EEEEGGGG-----------GGCCCEEEEET
T ss_pred EEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec------C-CC-eEEeCCCC-----------CcCCcEEEEEC
Confidence 86543 346899999999999999999999999865432 1 12 33458753 24799999999
Q ss_pred CCCcceEEEEcCceeEEEeC--CCeEEE-EEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCCC
Q 013772 358 DGKTRTLFELTTEAYLIISN--RGNVCL-GILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANC 425 (436)
Q Consensus 358 ~g~~~~~~~i~~~~y~~~~~--~~~~Cl-~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c 425 (436)
+ .+++|++++|+++.. ++..|+ ++...... ...+.||||+.|||++|+|||++++|||||+++.
T Consensus 274 g----~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~~ 341 (341)
T 3k1w_A 274 G----KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALARH 341 (341)
T ss_dssp T----EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEECC
T ss_pred C----EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECCC
Confidence 6 999999999998653 257897 56663211 1346899999999999999999999999999863
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.2e-55 Score=432.75 Aligned_cols=303 Identities=20% Similarity=0.321 Sum_probs=250.0
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
..+||.+ +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|. ++..
T Consensus 52 ~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~--~~~y~~~~Ss------T~~~---- 116 (375)
T 1miq_A 52 DVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSI--KNLYDSSKSK------SYEK---- 116 (375)
T ss_dssp BCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGG--SCCBCGGGCT------TCEE----
T ss_pred ceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCcccccC--CCcCCCccCC------ceEE----
Confidence 3456664 35779999999999999999999999999999999 996 5754 6789998872 2332
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeee----cCCCCCCCCCceeeeecCCCC--
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYD----QVPGASYHPLDGILGLGKGKS-- 214 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~~-- 214 (436)
..|.|.+.|++|+ +.|.+++|+|+| |+..+.+ .|||++. + ..+.....+||||||++..
T Consensus 117 --------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~-~~f~~~~~dGilGLg~~~~s~ 181 (375)
T 1miq_A 117 --------DGTKVDITYGSGT-VKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLE-PIYSSVEFDGILGLGWKDLSI 181 (375)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGT-THHHHSCCCEEEECSSCCTTC
T ss_pred --------CCcEEEEEeCCCe-EEEEEEEEEEEE----cCceECc-EEEEEEeccccc-cccccCCCceEEeCCCCcccc
Confidence 3679999999995 899999999999 5677888 9999998 4 3333457899999999864
Q ss_pred ----cHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCC
Q 013772 215 ----SIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKN 285 (436)
Q Consensus 215 ----s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~ 285 (436)
+++++|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..+|.|.++ |.|+++.+ ..
T Consensus 182 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~-i~v~g~~~--~~ 256 (375)
T 1miq_A 182 GSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH--DLYWQIDLD-VHFGKQTM--EK 256 (375)
T ss_dssp SSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS--SSSSEEEEE-EEETTEEE--EE
T ss_pred cCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC--CceEEEEEE-EEECCEEc--cc
Confidence 589999999999 89999999864 48999999876 4568999999974 489999999 99999887 45
Q ss_pred CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772 286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF 365 (436)
Q Consensus 286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~ 365 (436)
..+||||||++++||++++++|.+++.+... .. .+.+..+|+. . .+|+|+|+|+| ..|
T Consensus 257 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~-~-----------~~P~i~f~f~g----~~~ 314 (375)
T 1miq_A 257 ANVIVDSGTTTITAPSEFLNKFFANLNVIKV-----PF-LPFYVTTCDN-K-----------EMPTLEFKSAN----NTY 314 (375)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEC-----TT-SSCEEEETTC-T-----------TCCCEEEECSS----CEE
T ss_pred ceEEecCCCccEEcCHHHHHHHHHHhCCccc-----CC-CCeEEEECCC-C-----------CCCcEEEEECC----EEE
Confidence 7899999999999999999999999865422 11 2223456975 2 37999999985 999
Q ss_pred EEcCceeEEEeC--CCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 366 ELTTEAYLIISN--RGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 366 ~i~~~~y~~~~~--~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+|++++|+++.. ++..|+ +|+.... ..+.||||+.|||++|+|||++++|||||+++
T Consensus 315 ~l~~~~yi~~~~~~g~~~C~~~~~~~~~--~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 315 TLEPEYYMNPILEVDDTLCMITMLPVDI--DSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EECGGGSEEESSSSSCSEEEESEEECCS--SSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhEeeccCCCCCeEEEEEEECCC--CCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 999999999864 345896 7877542 12689999999999999999999999999975
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-54 Score=418.57 Aligned_cols=298 Identities=19% Similarity=0.299 Sum_probs=244.0
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD 152 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~ 152 (436)
.+..|+++|+|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|. +.. ..|.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-------~~~------------~~~~ 69 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA-------TKL------------SGYS 69 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC-------EEC------------TTCB
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC-------Ccc------------CCCE
Confidence 466899999999 89999999999999999999 9998876778899998882 111 4679
Q ss_pred eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-C-CCCCCceeeeecCCCC---------cHHHHhh
Q 013772 153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-A-SYHPLDGILGLGKGKS---------SIVSQLH 221 (436)
Q Consensus 153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~---------s~~~ql~ 221 (436)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. .+ + .....+||||||++.. +++++|+
T Consensus 70 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 144 (325)
T 1ibq_A 70 WDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKI-SSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVK 144 (325)
T ss_dssp EEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEec-CccccccCCCceEEEeCcccccccCcCCCCCHHHHHH
Confidence 9999999977999999999999 5678899999999985 33 2 2257899999999754 3789998
Q ss_pred hccccceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEecccccccc
Q 013772 222 SQKLIRNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYL 299 (436)
Q Consensus 222 ~~g~i~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~l 299 (436)
++ +-+++||+||.++..|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|.|+++.+...+..+||||||++++|
T Consensus 145 ~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 222 (325)
T 1ibq_A 145 SQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADS-SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILL 222 (325)
T ss_dssp GG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEE
T ss_pred Hh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCC-CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeC
Confidence 87 338999999997778999999875 5679999999973 3579999999999999877655678999999999999
Q ss_pred CHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCC-
Q 013772 300 SHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNR- 378 (436)
Q Consensus 300 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~- 378 (436)
|++++++|.+++.++.. ......+ ..+|+. .+|+|+|+|++ .+++||+++|++...+
T Consensus 223 P~~~~~~i~~~i~~a~~----~~~~g~~-~~~C~~-------------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~ 280 (325)
T 1ibq_A 223 DDEIVSAYYEQVSGAQE----SYEAGGY-VFSCST-------------DLPDFTVVIGD----YKAVVPGKYINYAPVST 280 (325)
T ss_dssp CHHHHHHHHTTSTTCBC----CSSSSSC-EEETTC-------------CCCCEEEEETT----EEEEECHHHHEEEESST
T ss_pred CHHHHHHHHHhCCCceE----cCcCCeE-EEEcCC-------------CCCcEEEEECC----EEEEECHHHhcccccCC
Confidence 99999999888743221 1111222 335862 37999999975 9999999999987533
Q ss_pred C-eEEEE-EEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 379 G-NVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 379 ~-~~Cl~-~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+ ..|++ +.... ..+.||||+.|||++|+|||++++|||||++.
T Consensus 281 ~~~~C~~~i~~~~---~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 281 GSSTCYGGIQSNS---GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TCSEEEESEEECT---TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEEcCC---CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 3 78976 55543 24689999999999999999999999999863
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.6e-55 Score=421.63 Aligned_cols=297 Identities=16% Similarity=0.250 Sum_probs=242.4
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD 152 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~ 152 (436)
.+..|+++|+|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|. +.. +.|.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-------~~~------------~~~~ 70 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA-------QKI------------DGAT 70 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC-------EEE------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC-------Ccc------------CCCe
Confidence 355899999999 79999999999999999999 9998766678899998882 111 3579
Q ss_pred eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-C-CCCCCceeeeecCCCC---------cHHHHhh
Q 013772 153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-A-SYHPLDGILGLGKGKS---------SIVSQLH 221 (436)
Q Consensus 153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~---------s~~~ql~ 221 (436)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. .+ + .....+||||||++.. +++++|+
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 145 (323)
T 1izd_A 71 WSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKV-SSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVK 145 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEec-cccccccCCCceEEecCcccccccCCCCCCCHHHHHH
Confidence 9999999977999999999999 5678899999999985 33 2 1256899999998753 4789998
Q ss_pred hccccceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEecccccccc
Q 013772 222 SQKLIRNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYL 299 (436)
Q Consensus 222 ~~g~i~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~l 299 (436)
++ +-+++||+||.++..|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|+|++ .+...+..+||||||+++++
T Consensus 146 ~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~l 222 (323)
T 1izd_A 146 SS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDN-SQGFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLL 222 (323)
T ss_dssp GG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBC-TTSSCEEEESEEEETT-EEECCCEEEEECTTCCSEEE
T ss_pred Hh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCC-CCceEEEEECeEEECC-cccCCCceEEEeCCCcceeC
Confidence 87 338999999997778999999876 3468999999973 3579999999999999 66555678999999999999
Q ss_pred CHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCCC
Q 013772 300 SHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNRG 379 (436)
Q Consensus 300 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~~ 379 (436)
|++++++|.+++.+... ......+. .+|+. .+|+|+|+|++ .+++||+++|+++..++
T Consensus 223 p~~~~~~i~~~i~ga~~----~~~~g~~~-~~C~~-------------~~P~i~f~fgg----~~~~i~~~~~~~~~~~~ 280 (323)
T 1izd_A 223 DDSIVDAYYEQVNGASY----DSSQGGYV-FPSSA-------------SLPDFSVTIGD----YTATVPGEYISFADVGN 280 (323)
T ss_dssp CHHHHHHHHTTSTTCEE----ETTTTEEE-EETTC-------------CCCCEEEEETT----EEEEECHHHHEEEECST
T ss_pred CHHHHHHHHHhCCCcEE----cCcCCEEE-EECCC-------------CCceEEEEECC----EEEecCHHHeEEecCCC
Confidence 99999999888743221 11112222 34862 37999999975 99999999999876556
Q ss_pred eEEEE-EEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 380 NVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 380 ~~Cl~-~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
..|++ +.... ..+.||||+.|||++|+|||++++|||||++.
T Consensus 281 ~~C~~~i~~~~---~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 281 GQTFGGIQSNS---GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TEEEESEEECT---TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CeEEEEEEcCC---CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 78976 66543 24689999999999999999999999999863
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.4e-55 Score=424.14 Aligned_cols=302 Identities=14% Similarity=0.208 Sum_probs=246.1
Q ss_pred EEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772 65 FRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAPGQ 142 (436)
Q Consensus 65 ~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~ 142 (436)
.||.+ +.+..|+++|+|| +|++.|+|||||+++||+|. +|. .|....++.|+|++| +++.
T Consensus 9 ~~l~n--~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S-------T~~~------ 70 (330)
T 1yg9_A 9 KLVHV--FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP-------KYIS------ 70 (330)
T ss_dssp SCEEE--EECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC-------EEEE------
T ss_pred eeeec--CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC-------ceEE------
Confidence 34543 2355899999999 89999999999999999999 997 685455778999876 2222
Q ss_pred CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCCCc------
Q 013772 143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGKSS------ 215 (436)
Q Consensus 143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------ 215 (436)
..+.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .. +.....+||||||++..+
T Consensus 71 ------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~ 138 (330)
T 1yg9_A 71 ------DGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGK 138 (330)
T ss_dssp ------EEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCC
T ss_pred ------CCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCC
Confidence 246899999999 5699999999999 5678899999999985 32 334578999999998765
Q ss_pred -HHHHhhhccccceeeEEEeCCC--C--CceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCE
Q 013772 216 -IVSQLHSQKLIRNVVGHCLSGR--G--GGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPV 288 (436)
Q Consensus 216 -~~~ql~~~g~i~~~Fs~~l~~~--~--~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~ 288 (436)
++++|++||+|+++||+||.+. . .|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+...+..+
T Consensus 139 ~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~a 216 (330)
T 1yg9_A 139 TVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG--DDSWKFRLDGVKIGDTTVAPAGTQA 216 (330)
T ss_dssp CHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC--TTSCCEECSEEEETTEEEECTTCEE
T ss_pred CHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC--CCEEEEEeCeEEECCEEEcCCCcEE
Confidence 9999999998899999999853 2 7999999875 4568999999973 4899999999999998876556789
Q ss_pred EEeccccccccCHHHHHHHHHHHHHhhccCCCccCCC--CCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEE
Q 013772 289 VFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPE--DRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFE 366 (436)
Q Consensus 289 iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~ 366 (436)
||||||++++||++++++|.+++.+... .. . .+...+|+.. ..+|+|+|+|++ .+++
T Consensus 217 iiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~-g~~~~~~~~C~~~-----------~~~p~i~f~fgg----~~~~ 275 (330)
T 1yg9_A 217 IIDTSKAIIVGPKAYVNPINEAIGCVVE-----KT-TTRRICKLDCSKI-----------PSLPDVTFVING----RNFN 275 (330)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHTCEEE-----EC-SSCEEEEECGGGG-----------GGSCCEEEEETT----EEEE
T ss_pred EEecCCccccCCHHHHHHHHHHhCCccc-----CC-CceEEEEEECCCc-----------cccCcEEEEECC----EEEE
Confidence 9999999999999999999999865432 11 1 2203348643 247999999975 9999
Q ss_pred EcCceeEEEeCCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 367 LTTEAYLIISNRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 367 i~~~~y~~~~~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
|++++|+++. +..|+ ++.... ..+.||||+.|||++|+|||++++|||||+++
T Consensus 276 l~~~~y~~~~--~~~C~~~i~~~~---~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 276 ISSQYYIQQN--GNLCYSGFQPCG---HSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ECHHHHEEEE--TTEEEESEEEET---TCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ECHHHhcccC--CCcEEEEEEeCC---CCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 9999999976 56896 566532 24679999999999999999999999999974
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-54 Score=423.83 Aligned_cols=312 Identities=21% Similarity=0.341 Sum_probs=243.6
Q ss_pred CeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCee
Q 013772 74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDY 153 (436)
Q Consensus 74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~~ 153 (436)
+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++|. +++. ..|.|
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~Ss------T~~~------------~~~~~ 68 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSS------TYRS------------KGFDV 68 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCT------TCEE------------EEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCc------ccee------------CCceE
Confidence 457999999999999999999999999999998 88777 4689998872 2222 35789
Q ss_pred eeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCC--CCCCCceeeeecCCCC--------cHHHHhhhc
Q 013772 154 EVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGA--SYHPLDGILGLGKGKS--------SIVSQLHSQ 223 (436)
Q Consensus 154 ~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~--~~~~~~GIlGLg~~~~--------s~~~ql~~~ 223 (436)
.+.|++| +++|.+++|+|+|+. +......+.|+++.+. .++ .....+||||||++.+ +++++|.+|
T Consensus 69 ~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q 144 (383)
T 2ewy_A 69 TVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFES-ENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQ 144 (383)
T ss_dssp EEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEE-ESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEee-cceeeccCcCceEEecCchhcccccccccCHHHHHHHc
Confidence 9999999 579999999999953 1111224678887664 332 1346899999998754 488899999
Q ss_pred cccceeeEEEeC---------CCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-----CCC
Q 013772 224 KLIRNVVGHCLS---------GRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-----NLP 287 (436)
Q Consensus 224 g~i~~~Fs~~l~---------~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-----~~~ 287 (436)
+.|+++||+||. ....|.|+||+.+ ++.+++.|+|+... .+|.|.+++|+|+++.+.++ ...
T Consensus 145 ~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~g~~~~~~~~~~~~~~ 222 (383)
T 2ewy_A 145 ANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE--WYYQIEILKLEIGGQSLNLDCREYNADK 222 (383)
T ss_dssp HTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB--TTBBCCEEEEEETTEECCCCTTTTTSSC
T ss_pred cCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC--ceEEEEEEEEEECCEEccccccccCCcc
Confidence 988889999985 2357999999875 56799999999853 79999999999999988653 358
Q ss_pred EEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCC---CCCCccccCCCCCCcccccccccceEEEEEeCCC--cc
Q 013772 288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPED---RTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK--TR 362 (436)
Q Consensus 288 ~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~--~~ 362 (436)
+||||||++++||+++|++|.+++.+.... ...... ....+|+.... .....+|+|+|+|+++. ..
T Consensus 223 aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~~ 293 (383)
T 2ewy_A 223 AIVDSGTTLLRLPQKVFDAVVEAVARASLI---PEFSDGFWTGSQLACWTNSE------TPWSYFPKISIYLRDENSSRS 293 (383)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHHHTTCS---SCCCHHHHHTSEEEEECSSS------CGGGGSCCEEEEEECSSTTEE
T ss_pred EEEEcCCccccCCHHHHHHHHHHHhhhccc---ccCccccccccccccccCCc------ccHhhCCcEEEEECCCCCCce
Confidence 999999999999999999999999886541 111111 12456986432 11235899999999731 13
Q ss_pred eEEEEcCceeEEEeC---CCeEEEEE--EeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCC
Q 013772 363 TLFELTTEAYLIISN---RGNVCLGI--LNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRI 428 (436)
Q Consensus 363 ~~~~i~~~~y~~~~~---~~~~Cl~~--~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 428 (436)
.+|+|++++|+.+.. .+..|+++ ... .+.||||+.|||++|+|||++++|||||+++|+..
T Consensus 294 ~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 359 (383)
T 2ewy_A 294 FRITILPQLYIQPMMGAGLNYECYRFGISPS-----TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEI 359 (383)
T ss_dssp EEEEECHHHHEEEECCCTTCSEEEEESEEEE-----SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBS
T ss_pred EEEEEChHHheeecccCCCCceeEEEEecCC-----CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCc
Confidence 589999999998763 35689753 332 35799999999999999999999999999999753
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=7.9e-55 Score=419.42 Aligned_cols=295 Identities=18% Similarity=0.277 Sum_probs=240.4
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD 152 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~ 152 (436)
.+..|+++|+|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|. +.. ..|.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss-------~~~------------~~~~ 70 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG-------KEL------------SGYT 70 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC-------EEE------------EEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC-------ccc------------CCCe
Confidence 355899999999 89999999999999999999 9998876778899998772 111 3679
Q ss_pred eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-C-CCCCCceeeeecCCCC---------cHHHHhh
Q 013772 153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-A-SYHPLDGILGLGKGKS---------SIVSQLH 221 (436)
Q Consensus 153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~---------s~~~ql~ 221 (436)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.. .+ + .....+||||||++.. +++++|+
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~-~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 145 (323)
T 1bxo_A 71 WSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQI-SAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVK 145 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEec-CcccccCCCCceEEEeCcccccccccCCCCCHHHHHH
Confidence 9999999977999999999999 5677899999999985 33 2 2257899999998743 4889999
Q ss_pred hcccc-ceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccc
Q 013772 222 SQKLI-RNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTY 298 (436)
Q Consensus 222 ~~g~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~ 298 (436)
++ | +++||+||.++..|.|+||+.+ ++.+++.|+|+.. ...+|.|.+++|+|++ +...+..+||||||++++
T Consensus 146 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~~ 220 (323)
T 1bxo_A 146 SS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDN-SQGFWSFNVDSYTAGS--QSGDGFSGIADTGTTLLL 220 (323)
T ss_dssp GG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEEEEEEETT--EEEEEEEEEECTTCSSEE
T ss_pred Hh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCC-CCCeEEEEEeeEEECC--ccCCCceEEEeCCCCcee
Confidence 87 6 8999999997778999999876 5679999999974 3579999999999999 333357899999999999
Q ss_pred cCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCC
Q 013772 299 LSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNR 378 (436)
Q Consensus 299 lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~ 378 (436)
+|++++++|.+++.+... ......+. .+|+. .+|+|+|+|++ .+++||+++|+++..+
T Consensus 221 lP~~~~~~l~~~i~~a~~----~~~~g~~~-~~C~~-------------~~P~i~f~fgg----~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 221 LDDSVVSQYYSQVSGAQQ----DSNAGGYV-FDCST-------------NLPDFSVSISG----YTATVPGSLINYGPSG 278 (323)
T ss_dssp ECHHHHHHHHTTSTTCEE----ETTTTEEE-ECTTC-------------CCCCEEEEETT----EEEEECHHHHEEEECS
T ss_pred CCHHHHHHHHHhCCCceE----cCcCCEEE-EECCC-------------CCceEEEEECC----EEEEECHHHeEEeccC
Confidence 999999999888743221 11112222 35862 37999999975 9999999999987643
Q ss_pred C-eEEEE-EEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 379 G-NVCLG-ILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 379 ~-~~Cl~-~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+ ..|++ +.... ..+.||||+.|||++|+|||++++|||||++.
T Consensus 279 ~~~~C~~~i~~~~---~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 279 DGSTCLGGIQSNS---GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSSCEEESEEECT---TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEECCC---CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 3 68976 66543 24689999999999999999999999999863
No 27
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.1e-54 Score=432.62 Aligned_cols=303 Identities=20% Similarity=0.306 Sum_probs=247.7
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
..+||.. +.+..|+++|+||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|. ++..
T Consensus 128 ~~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss------T~~~---- 192 (453)
T 2bju_A 128 DNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR------TYEK---- 192 (453)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT------TCEE----
T ss_pred CceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC------ceeE----
Confidence 4577774 35679999999999999999999999999999999 997 565 46789998872 2332
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCC--C--CCCCCCceeeeecCCCC--
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVP--G--ASYHPLDGILGLGKGKS-- 214 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~--~--~~~~~~~GIlGLg~~~~-- 214 (436)
..|.|.+.|++|+ ++|.+++|+|+| |+..++ +.|||++.. . + +.....+||||||++..
T Consensus 193 --------~~~~~~i~YgdGs-~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~-~~~g~~f~~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 193 --------DGTKVEMNYVSGT-VSGFFSKDLVTV----GNLSLP-YKFIEVIDT-NGFEPTYTASTFDGILGLGWKDLSI 257 (453)
T ss_dssp --------EEEEEEEECSSSE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEC-GGGTTHHHHSSCCEEEECSCGGGST
T ss_pred --------CCcEEEEEcCCCC-eEEEEEEEEEEE----eCcEEE-EEEEEEEEe-cccCccccccCCceeEeccCCcccc
Confidence 3679999999995 899999999999 567778 999999986 3 3 23357899999998753
Q ss_pred ----cHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCC
Q 013772 215 ----SIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKN 285 (436)
Q Consensus 215 ----s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~ 285 (436)
+++++|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+... .+|.|.++ |.|++..+ .+
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~--~~w~V~l~-I~Vgg~~~--~~ 332 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD--LYWQITLD-AHVGNIML--EK 332 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE--TTEEEEEE-EEETTEEE--EE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC--ceEEEEEE-EEECcEEe--cc
Confidence 588999999999 89999999854 68999999876 45689999999753 89999999 99999432 45
Q ss_pred CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772 286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF 365 (436)
Q Consensus 286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~ 365 (436)
..+||||||+++++|++++++|.+++.+.. ...+..+..+|+. . .+|+|+|+|+| ..+
T Consensus 333 ~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~------~~~g~~~~v~C~~-~-----------~~P~itf~fgg----~~~ 390 (453)
T 2bju_A 333 ANCIVDSGTSAITVPTDFLNKMLQNLDVIK------VPFLPFYVTLCNN-S-----------KLPTFEFTSEN----GKY 390 (453)
T ss_dssp EEEEECTTCCSEEECHHHHHHHTTTSSCEE------CTTSSCEEEETTC-T-----------TCCCEEEECSS----CEE
T ss_pred ccEEEcCCCCeEecCHHHHHHHHHHhCCcc------cCCCceEEEecCC-C-----------CCCcEEEEECC----EEE
Confidence 789999999999999999999988875421 1111133456975 2 37999999985 999
Q ss_pred EEcCceeEEEeCC--CeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 366 ELTTEAYLIISNR--GNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 366 ~i~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+|+|++|+++... +..|+ ++..... ..+.||||++|||++|+|||++++|||||+++
T Consensus 391 ~l~~~~yi~~~~~~g~~~C~~~~~~~~~--~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 391 TLEPEYYLQHIEDVGPGLCMLNIIGLDF--PVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCC--SSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EECHHHhEeecccCCCceEEEEEEeCCC--CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 9999999998653 46896 6776542 13589999999999999999999999999986
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.7e-53 Score=421.60 Aligned_cols=311 Identities=20% Similarity=0.286 Sum_probs=244.0
Q ss_pred CeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCee
Q 013772 74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDY 153 (436)
Q Consensus 74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~~ 153 (436)
+..|+++|+||||+|++.|+|||||+++||+|. +|..| ++.|+|++|. +++. ..|.|
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss------T~~~------------~~~~~ 76 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS------TYRD------------LRKGV 76 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT------TCEE------------EEEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC------Ccee------------CCceE
Confidence 458999999999999999999999999999998 88765 4689998872 2222 35789
Q ss_pred eeeeCCCceEEEEEEEEEEEeecCCCCcCCC-ceEEeeeeecCCC-C-CCCCCceeeeecCCCC--------cHHHHhhh
Q 013772 154 EVEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYDQVPG-A-SYHPLDGILGLGKGKS--------SIVSQLHS 222 (436)
Q Consensus 154 ~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~~--------s~~~ql~~ 222 (436)
.+.|++| +++|.+++|+|+|+. +..+. .+.|+++... .+ + .....+||||||++.. +++++|++
T Consensus 77 ~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~-~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~ 151 (395)
T 2qp8_A 77 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITES-DKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 151 (395)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEE-ESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEcc-CcccccccCccceEEcCchhhccCCCCCCCHHHHHHH
Confidence 9999999 569999999999952 22232 3668887654 33 2 1356899999998753 58889999
Q ss_pred ccccceeeEEEeCC------------CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC----
Q 013772 223 QKLIRNVVGHCLSG------------RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK---- 284 (436)
Q Consensus 223 ~g~i~~~Fs~~l~~------------~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~---- 284 (436)
|+.|+++||+||.+ ...|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|+|+++.+.++
T Consensus 152 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~g~~~~~~~~~~ 229 (395)
T 2qp8_A 152 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEY 229 (395)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS--BTTBBCCEEEEEETTEECCCCGGGG
T ss_pred ccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC--CceEEEEEEEEEECCEEcccCcccc
Confidence 99998899999964 267999999875 4568999999975 379999999999999987643
Q ss_pred -CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCC---CCCCCccccCCCCCCcccccccccceEEEEEeCCC
Q 013772 285 -NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPE---DRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK 360 (436)
Q Consensus 285 -~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~ 360 (436)
...+||||||++++||+++|++|.++|.+.... ..... .....+|+.... .....+|+|+|+|+++.
T Consensus 230 ~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~ 300 (395)
T 2qp8_A 230 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST---EKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEV 300 (395)
T ss_dssp GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTT---SCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSS
T ss_pred CCceEEEEcCCCcEecCHHHHHHHHHHHhhhccc---ccCCcccccccccccccccc------chHhhCCcEEEEEccCC
Confidence 368999999999999999999999999887542 11111 112346986532 12335899999999731
Q ss_pred --cceEEEEcCceeEEEeCC----CeEEE--EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCC
Q 013772 361 --TRTLFELTTEAYLIISNR----GNVCL--GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRI 428 (436)
Q Consensus 361 --~~~~~~i~~~~y~~~~~~----~~~Cl--~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~ 428 (436)
...+|+|+|++|+++..+ ...|+ ++... .+.||||+.|||++|+|||++++|||||+++|+..
T Consensus 301 ~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~ 371 (395)
T 2qp8_A 301 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-----STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVH 371 (395)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-----SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCC
T ss_pred CCceEEEEECHHHhEeecccCCCCCceEEEEEecCC-----CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCC
Confidence 113799999999987643 24896 44432 35799999999999999999999999999999964
No 29
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1e-53 Score=430.10 Aligned_cols=315 Identities=19% Similarity=0.263 Sum_probs=247.4
Q ss_pred CeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCee
Q 013772 74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDY 153 (436)
Q Consensus 74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~~ 153 (436)
+..|+++|+||||+|++.|+|||||+++||+|. +| |. .++.|+|++|. +++. ..|.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss------T~~~------------~~~~~ 129 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYRD------------LRKGV 129 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC------Cccc------------CCccE
Confidence 448999999999999999999999999999998 77 43 46789998872 2222 35799
Q ss_pred eeeeCCCceEEEEEEEEEEEeecCCCCcCC-CceEEeeeeecCCCC-CCCCCceeeeecCCC--------CcHHHHhhhc
Q 013772 154 EVEYADGGSSLGVLVKDAFAFNYTNGQRLN-PRLALGCGYDQVPGA-SYHPLDGILGLGKGK--------SSIVSQLHSQ 223 (436)
Q Consensus 154 ~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~-~~~~Fg~~~~~~~~~-~~~~~~GIlGLg~~~--------~s~~~ql~~~ 223 (436)
.+.|++| ++.|.+++|+|+|+. ...+ ..+.|+++......+ .....+||||||++. .+++++|++|
T Consensus 130 ~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q 205 (455)
T 3lpj_A 130 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ 205 (455)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred EEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHc
Confidence 9999999 579999999999953 2222 246788887752222 235789999999874 3689999999
Q ss_pred cccceeeEEEeCC------------CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-----
Q 013772 224 KLIRNVVGHCLSG------------RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK----- 284 (436)
Q Consensus 224 g~i~~~Fs~~l~~------------~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~----- 284 (436)
+.|+++||+||.+ ...|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+.++
T Consensus 206 ~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~g~~~~~~~~~~~ 283 (455)
T 3lpj_A 206 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEYN 283 (455)
T ss_dssp SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS--BTTBBCCEEEEEETTEECCCCGGGGG
T ss_pred cCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC--CceeEEEEeEEEECCEEccccccccC
Confidence 9998899999963 357999999875 4568999999985 489999999999999988653
Q ss_pred CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCC---CCCCCccccCCCCCCcccccccccceEEEEEeCCC-
Q 013772 285 NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPE---DRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK- 360 (436)
Q Consensus 285 ~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~- 360 (436)
...+||||||++++||++++++|.++|.+.... ..... .....+|+.... ..+..+|+|+|+|++..
T Consensus 284 ~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~---~~~~~~~~~g~~~~C~~~~~------~~~~~~P~i~f~f~g~~~ 354 (455)
T 3lpj_A 284 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASST---EKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVT 354 (455)
T ss_dssp SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTT---SCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSST
T ss_pred CCeEEEECCCcceeCCHHHHHHHHHHhhhhccc---cccCcccccCcceecccccC------CchhcCCcEEEEEcCCCc
Confidence 468999999999999999999999999987541 11111 122457987542 11235899999999731
Q ss_pred -cceEEEEcCceeEEEeCCC----eEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCc
Q 013772 361 -TRTLFELTTEAYLIISNRG----NVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIP 429 (436)
Q Consensus 361 -~~~~~~i~~~~y~~~~~~~----~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~ 429 (436)
...+|+|+|++|+++..+. ..|+++.... ..+.||||+.|||++|+|||++++|||||+++|+..+
T Consensus 355 ~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~ 425 (455)
T 3lpj_A 355 NQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHD 425 (455)
T ss_dssp TEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE---ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCC
T ss_pred CceEEEEECHHHheEeccCCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEeccccccc
Confidence 1236999999999976542 5898643221 1357999999999999999999999999999998775
No 30
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.5e-54 Score=432.32 Aligned_cols=303 Identities=17% Similarity=0.261 Sum_probs=247.0
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC--CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV--QCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~--~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
..+||.. +.+..|+++|+||||||++.|++||||+++||+|. .|. .|.. ++.|+|++|. ++..
T Consensus 127 ~~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~~--~~~ydps~Ss------T~~~---- 191 (451)
T 3qvc_A 127 DNVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCES--KNHYDSSKSK------TYEK---- 191 (451)
T ss_dssp CCCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGTT--SCCBCGGGCT------TCEE----
T ss_pred Cccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccCC--CCCCCCCCCc------cccc----
Confidence 3456653 35778999999999999999999999999999999 894 6854 5789998872 2222
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeee----cCCCCCCCCCceeeeecCCC---
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYD----QVPGASYHPLDGILGLGKGK--- 213 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~GIlGLg~~~--- 213 (436)
..|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++. . .++.....+||||||++.
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~-~~f~~~~~dGILGLg~~~~s~ 256 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFE-PFYSESDVDGVFGLGWKDLSI 256 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECT-THHHHSCCCEEEECSSBCSSS
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEE----CCEEEE-EEEEEEEeccccC-CCccCCCCCEEEecCCCcccc
Confidence 3579999999995 999999999999 567778 99999988 4 334345789999999975
Q ss_pred ---CcHHHHhhhcccc-ceeeEEEeCCC--CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCC
Q 013772 214 ---SSIVSQLHSQKLI-RNVVGHCLSGR--GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKN 285 (436)
Q Consensus 214 ---~s~~~ql~~~g~i-~~~Fs~~l~~~--~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~ 285 (436)
.+++++|++||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..+|.|.++ |.|+++ ....
T Consensus 257 ~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~--~~~w~v~l~-I~Vgg~--~~~~ 331 (451)
T 3qvc_A 257 GSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH--DLMWQVDLD-VHFGNV--SSKK 331 (451)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS--TTSSEEEEE-EEETTE--EEEE
T ss_pred cCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc--CCeeEEEEE-EEECCc--cCCC
Confidence 3699999999999 89999999854 47999999876 4568999999984 489999999 999998 3335
Q ss_pred CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772 286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF 365 (436)
Q Consensus 286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~ 365 (436)
..+++||||+++++|++++++|.+++.+... .. .+.+..+|. . ..+|+|+|+|+| .++
T Consensus 332 ~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~-----~~-~g~y~v~C~-~-----------~~~P~itf~fgg----~~i 389 (451)
T 3qvc_A 332 ANVILDSATSVITVPTEFFNQFVESASVFKV-----PF-LSLYVTTCG-N-----------TKLPTLEYRSPN----KVY 389 (451)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHTTTTCEEC-----TT-SSCEEEETT-C-----------TTCCCEEEEETT----EEE
T ss_pred ceEEEeCCCccccCCHHHHHHHHHHcCCeec-----CC-CCeEEeeCC-c-----------CcCCcEEEEECC----EEE
Confidence 7899999999999999999999988865432 11 122334686 2 247999999986 999
Q ss_pred EEcCceeEEEeC--CCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 366 ELTTEAYLIISN--RGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 366 ~i~~~~y~~~~~--~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
+||+++|+++.. ++..|+ ++..... ..+.||||++|||++|+|||++++|||||+++
T Consensus 390 ~lp~~~yi~~~~~~~~~~C~~~i~~~~~--~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 390 TLEPKQYLEPLENIFSALCMLNIVPIDL--EKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EECHHHHEEECTTTSTTEEEECEEECCC--STTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEcHHHheeecccCCCCeEEEEEEeCCC--CCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999999864 246785 5666431 14689999999999999999999999999985
No 31
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=9.8e-54 Score=430.13 Aligned_cols=325 Identities=21% Similarity=0.347 Sum_probs=247.9
Q ss_pred eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 013772 63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV---QCVEAPHPLYRPSNDLVPCEDPICASLHA 139 (436)
Q Consensus 63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~p~~S~~~c~s~~c~~~~~ 139 (436)
..+||.+ +.++.|+++|+||||+|++.|+|||||+++||+|. .|. .|.. ++.|+|++|. +++.
T Consensus 42 ~~~~l~n--~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~--- 107 (478)
T 1qdm_A 42 DIVALKN--YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYL--HSRYKAGASS------TYKK--- 107 (478)
T ss_dssp CSGGGCC--GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGG--SCCBCGGGCT------TCBC---
T ss_pred ceEEeEe--ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCccccC--CCCCCcccCC------Ceee---
Confidence 3456664 35678999999999999999999999999999998 895 6875 4689998872 2222
Q ss_pred CCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCCc--
Q 013772 140 PGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKSS-- 215 (436)
Q Consensus 140 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~s-- 215 (436)
..|.|.+.|++| +++|.+++|+|+| |+..+.++.|||++.+ .+ +.....+||||||++..+
T Consensus 108 ---------~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~-~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 108 ---------NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKE-PGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp ---------CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CBSHHHHCSSSEEEECSCGGGCGG
T ss_pred ---------CCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEec-CCcccccccccceecccccccccC
Confidence 467999999999 5899999999999 5677889999999885 43 334568999999998654
Q ss_pred ----HHHHhhhcccc-ceeeEEEeCCC----CCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEecc-
Q 013772 216 ----IVSQLHSQKLI-RNVVGHCLSGR----GGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGL- 283 (436)
Q Consensus 216 ----~~~ql~~~g~i-~~~Fs~~l~~~----~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~- 283 (436)
++.+|.+||+| +++||+||.+. ..|.|+||+.+ ++.+++.|+|+.. ..||.|.+++|.|+++.+.+
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~--~~~w~v~l~~i~v~g~~~~~~ 250 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ--KGYWQFDMGDVLVGGKSTGFC 250 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE--ETTEEEEECCEEETTEECSTT
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC--CCeEEEEEeEEEECCEEEeec
Confidence 67899999999 89999999853 47999999876 4468999999975 37999999999999998754
Q ss_pred -CCCCEEEeccccccccCHHHHHHHHHHHHHhh----------------------ccC---------CCccCCCC-----
Q 013772 284 -KNLPVVFDSGSSYTYLSHVAYQTLTSMMKREL----------------------SAK---------SLKEAPED----- 326 (436)
Q Consensus 284 -~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~----------------------~~~---------~~~~~~~~----- 326 (436)
....+|+||||+++++|++++++|.++|.+.. ... ++......
T Consensus 251 ~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~ 330 (478)
T 1qdm_A 251 AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSA 330 (478)
T ss_dssp TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----------
T ss_pred CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccc
Confidence 34689999999999999999999999886421 000 00000000
Q ss_pred -----------------------------------------------CCCCccccCCCCCC----cccccccccceEEEE
Q 013772 327 -----------------------------------------------RTLPLCWKGKRPFK----NVRDVKKYFKSLALS 355 (436)
Q Consensus 327 -----------------------------------------------~~~~~C~~~~~~~~----~~~~~~~~~P~i~f~ 355 (436)
+..+.|+..+.... .+. ....+|+|+|+
T Consensus 331 ~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~-~~~~lP~i~f~ 409 (478)
T 1qdm_A 331 GIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCG-SLGSMPDIEFT 409 (478)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGG-GGTTCCCEEEE
T ss_pred cccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecc-cccccccEEEE
Confidence 00112333221100 001 12458999999
Q ss_pred EeCCCcceEEEEcCceeEEEeCC--CeEEEE-EEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772 356 FTDGKTRTLFELTTEAYLIISNR--GNVCLG-ILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA 423 (436)
Q Consensus 356 f~~g~~~~~~~i~~~~y~~~~~~--~~~Cl~-~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~ 423 (436)
|+| ..|+|+|++|+++..+ +..|++ |...... ...+.||||+.|||++|+|||++++|||||++
T Consensus 410 ~gg----~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 410 IGG----KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp ETT----EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ECC----EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 986 9999999999998654 358975 6543211 12468999999999999999999999999986
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.8e-53 Score=421.03 Aligned_cols=319 Identities=18% Similarity=0.254 Sum_probs=245.2
Q ss_pred CeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCee
Q 013772 74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCDY 153 (436)
Q Consensus 74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~~ 153 (436)
...|+++|+||||+|++.|+|||||+++||+|. +| |. .++.|+|++|. +++. ..|.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss------T~~~------------~~~~~ 83 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYRD------------LRKGV 83 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCEE------------EEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc------cccc------------CCCEE
Confidence 348999999999999999999999999999998 77 42 35789998872 2222 36799
Q ss_pred eeeeCCCceEEEEEEEEEEEeecCCCCcCCC-ceEEeeeeecCCC-C-CCCCCceeeeecCCC--------CcHHHHhhh
Q 013772 154 EVEYADGGSSLGVLVKDAFAFNYTNGQRLNP-RLALGCGYDQVPG-A-SYHPLDGILGLGKGK--------SSIVSQLHS 222 (436)
Q Consensus 154 ~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~-~-~~~~~~GIlGLg~~~--------~s~~~ql~~ 222 (436)
.+.|++| ++.|.+++|+|+|+. ...+. .+.|+++... .+ + .....+||||||++. .+++++|++
T Consensus 84 ~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~-~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 158 (402)
T 3vf3_A 84 YVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITES-DKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 158 (402)
T ss_dssp EEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEE-ESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEcc-ccccccCCCccceEEcCchhhcccCCcCCcHHHHHHH
Confidence 9999999 579999999999952 22233 3457887764 33 2 235789999999874 368999999
Q ss_pred ccccceeeEEEeCC------------CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC----
Q 013772 223 QKLIRNVVGHCLSG------------RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK---- 284 (436)
Q Consensus 223 ~g~i~~~Fs~~l~~------------~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~---- 284 (436)
|+.|+++||+||.+ ...|.|+||+.+ ++.+++.|+|+.. ..+|.|.+++|.|+++.+..+
T Consensus 159 q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~--~~~w~v~l~~i~v~g~~~~~~~~~~ 236 (402)
T 3vf3_A 159 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEY 236 (402)
T ss_dssp HSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS--BTTBEECEEEEEETTEECCCCGGGG
T ss_pred ccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc--CcEEEEEEeEEEECCEEeccccccc
Confidence 99998899999962 347999999875 4568999999985 489999999999999988653
Q ss_pred -CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCC--c
Q 013772 285 -NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGK--T 361 (436)
Q Consensus 285 -~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~--~ 361 (436)
...+||||||++++||++++++|.+++.+......+..........+|+.... ..+..+|+|+|+|+++. .
T Consensus 237 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~~P~i~f~f~g~~~~~ 310 (402)
T 3vf3_A 237 NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQ 310 (402)
T ss_dssp GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC------CCGGGSCCEEEEEECSSTTE
T ss_pred CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc------chHhhCCceEEEEecCCCCc
Confidence 46899999999999999999999999998754111111101112457986542 11235899999999731 1
Q ss_pred ceEEEEcCceeEEEeCCC----eEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccc
Q 013772 362 RTLFELTTEAYLIISNRG----NVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKS 431 (436)
Q Consensus 362 ~~~~~i~~~~y~~~~~~~----~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~ 431 (436)
..+++|+|++|+++..+. ..|+++.... ..+.||||+.|||++|+|||++++|||||+++|+...++
T Consensus 311 ~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~---~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~ 381 (402)
T 3vf3_A 311 SFRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEF 381 (402)
T ss_dssp EEEEEECHHHHEEECCCGGGTTEEEEEECEEE---ESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSS
T ss_pred eEEEEECHHHheehhccCCCCCceEEEEeccC---CCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCc
Confidence 236999999999976432 4898642211 135799999999999999999999999999999975543
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-53 Score=411.12 Aligned_cols=301 Identities=22% Similarity=0.287 Sum_probs=241.3
Q ss_pred EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 013772 64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQH 143 (436)
Q Consensus 64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~ 143 (436)
.+||.+. +..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|. +.
T Consensus 4 ~~~l~n~---~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss--------~~------- 54 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTS--------SA------- 54 (340)
T ss_dssp EEEEEEC---SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTC--------EE-------
T ss_pred cEeeecc---CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCc--------cc-------
Confidence 4677753 348999999999999999999999999999875 368987762 11
Q ss_pred CCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCCC---------
Q 013772 144 KCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKS--------- 214 (436)
Q Consensus 144 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~--------- 214 (436)
..|.|.+.|++| +++|.+++|+|+| ++..++++.|||++.. .++ ...+||||||++..
T Consensus 55 -----~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~-~~~--~~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 55 -----TSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRD-SGF--DGVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp -----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-ESC--TTCSEEEECSCGGGGTTSEESCT
T ss_pred -----cCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEcc-CCC--cCCCcEEECCccccccccccccc
Confidence 367999999999 5999999999999 5678899999999985 443 36899999998753
Q ss_pred -----cHHHHhhhcccc-ceeeEEEeCC-----CCCceEEeCCCC--CCCCCcEEEEcccCC--CCceeeEeeEEEECC-
Q 013772 215 -----SIVSQLHSQKLI-RNVVGHCLSG-----RGGGFLFFGDDL--YDSSRVVWTSMSSDY--TKYYSPGVAELFFGG- 278 (436)
Q Consensus 215 -----s~~~ql~~~g~i-~~~Fs~~l~~-----~~~G~l~fG~~~--~~~~~~~~~p~~~~~--~~~~~v~l~~i~v~g- 278 (436)
+++++|++||+| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+.... ..||.|. .+|.|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 578999999999 8999999984 247999999875 567999999998643 4799999 9999998
Q ss_pred EEeccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeC
Q 013772 279 KTTGLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTD 358 (436)
Q Consensus 279 ~~i~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~ 358 (436)
+.+.. +..+||||||++++||++++++|.+++.+... .. ......+|... ..+|+|+|+|++
T Consensus 201 ~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~-----~~-~g~~~~~C~~~-----------~~~p~i~f~f~g 262 (340)
T 1wkr_A 201 TSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-----NN-TGLLRLTTAQY-----------ANLQSLFFTIGG 262 (340)
T ss_dssp EEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-----TT-TSSEEECHHHH-----------HTCCCEEEEETT
T ss_pred eEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc-----CC-CCeEEeecccc-----------ccCCcEEEEECC
Confidence 77753 46899999999999999999999888865432 11 12233458642 237999999986
Q ss_pred CCcceEEEEcCceeEEEeC-------CCeEE-EEEEeCCcC-CCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCc
Q 013772 359 GKTRTLFELTTEAYLIISN-------RGNVC-LGILNGAEV-GLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIP 429 (436)
Q Consensus 359 g~~~~~~~i~~~~y~~~~~-------~~~~C-l~~~~~~~~-~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~ 429 (436)
..+.|+|++|+++.. +...| +++...... +....||||+.|||++|+|||++++|||||+++|++.+
T Consensus 263 ----~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 263 ----QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp ----EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred ----EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 999999999997642 12345 667653211 12346999999999999999999999999999998754
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.6e-42 Score=314.77 Aligned_cols=219 Identities=21% Similarity=0.352 Sum_probs=184.4
Q ss_pred EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC---CCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772 64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV---QCVEAPHPLYRPSNDLVPCEDPICASLHAP 140 (436)
Q Consensus 64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~---~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~ 140 (436)
.+||.+ +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|. +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~~--~~~y~~~~Ss------T~~~---- 68 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRA--HSMYESSDSS------TYKE---- 68 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHT--SCCBCGGGCT------TCEE----
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccCC--CCCCCCccCC------Ceee----
Confidence 467774 35779999999999999999999999999999998 896 5764 5689998872 2222
Q ss_pred CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCCc--H
Q 013772 141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKSS--I 216 (436)
Q Consensus 141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~s--~ 216 (436)
..|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.. .+ +.....+||||||++..+ +
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~-~~~~f~~~~~~GilGLg~~~~s~p~ 134 (239)
T 1b5f_A 69 --------NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDE-ADNVFLHRLFDGILGLSFQTISVPV 134 (239)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHTTCSCCEEEECSCCSSSCCH
T ss_pred --------CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEec-cCccccccCcceEEecCccccccHH
Confidence 357899999999 5899999999999 5677889999999875 33 345578999999999865 7
Q ss_pred HHHhhhcccc-ceeeEEEeCC----CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC--CCC
Q 013772 217 VSQLHSQKLI-RNVVGHCLSG----RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK--NLP 287 (436)
Q Consensus 217 ~~ql~~~g~i-~~~Fs~~l~~----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~--~~~ 287 (436)
+.+|++|++| +++||+||.+ ...|.|+||+.+ ++.+++.|+|+... .+|.|.+++|.|+++.+.+. ...
T Consensus 135 ~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~ 212 (239)
T 1b5f_A 135 WYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQ 212 (239)
T ss_dssp HHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTTTCEE
T ss_pred HHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC--CeEEEEeeEEEECCEEecccCCCCE
Confidence 7889999999 8999999985 357999999875 45689999999853 79999999999999987643 468
Q ss_pred EEEeccccccccCHHHHHHHHHHHHH
Q 013772 288 VVFDSGSSYTYLSHVAYQTLTSMMKR 313 (436)
Q Consensus 288 ~iiDSGTt~~~lp~~~~~~l~~~i~~ 313 (436)
+||||||++++||++++++|.++|.+
T Consensus 213 aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 213 AFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEEecCcchhhCCHHHHHHHHHHhCC
Confidence 99999999999999999999988753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=4.5e-38 Score=290.14 Aligned_cols=220 Identities=20% Similarity=0.328 Sum_probs=177.0
Q ss_pred CcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------cHHHHhhhcccc-ceeeEEEeCCCC----CceEEeCC
Q 013772 180 QRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------SIVSQLHSQKLI-RNVVGHCLSGRG----GGFLFFGD 246 (436)
Q Consensus 180 ~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------s~~~ql~~~g~i-~~~Fs~~l~~~~----~G~l~fG~ 246 (436)
+.+++++.|||++.+ .+ +.....+||||||++.. +++++|++||+| +++||+||.+.. .|.|+||+
T Consensus 2 g~~v~~~~Fg~~~~~-~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 2 GVKVERQVFGEATKQ-PGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CEEEEEEEEEEEEEC-CSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CeEECCeEEEEEEEc-cCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 456789999999986 44 44567899999999854 588999999999 899999998542 79999998
Q ss_pred CC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEe-ccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccC
Q 013772 247 DL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTT-GLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEA 323 (436)
Q Consensus 247 ~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i-~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~ 323 (436)
.+ ++.+++.|+|+.. ..+|.|.+++|+|+++.+ ...+..+|+||||+++++|++++++|.+++.+... .
T Consensus 81 ~d~~~~~g~l~~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~ 152 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTR--KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL------I 152 (241)
T ss_dssp CCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE------E
T ss_pred cCHHHcCCceEEEECcc--ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec------c
Confidence 75 4568999999974 489999999999999764 33456899999999999999999999999865432 1
Q ss_pred CCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEEeCC--CeEEE-EEEeCCcC-CCCCceee
Q 013772 324 PEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLIISNR--GNVCL-GILNGAEV-GLQDLNVI 399 (436)
Q Consensus 324 ~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~--~~~Cl-~~~~~~~~-~~~~~~iL 399 (436)
...+..+|+... .+|+|+|+|++ .+++|++++|+++..+ +..|+ ++...... ...+.|||
T Consensus 153 -~g~~~~~C~~~~-----------~~p~i~f~f~g----~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~il 216 (241)
T 1lya_B 153 -QGEYMIPCEKVS-----------TLPAITLKLGG----KGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWIL 216 (241)
T ss_dssp -TTEEEEEGGGGG-----------GSCCEEEEETT----EEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEE
T ss_pred -CCcEEEECCCCc-----------cCCeEEEEECC----EEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEe
Confidence 122334597532 47999999975 9999999999998653 46897 57765321 12468999
Q ss_pred ChhhhcceEEEEECCCCEEEEEeCC
Q 013772 400 GDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 400 G~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
|++|||++|+|||++++|||||+++
T Consensus 217 G~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 217 GDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred chHHhcceEEEEECCCCEEEEEEcC
Confidence 9999999999999999999999974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.84 E-value=5.1e-21 Score=148.82 Aligned_cols=88 Identities=22% Similarity=0.456 Sum_probs=73.9
Q ss_pred EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCC----CCCCCCCCCCCCCCCCCCCCCcccccCCC
Q 013772 64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCV----QCVEAPHPLYRPSNDLVPCEDPICASLHA 139 (436)
Q Consensus 64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~----~C~~~~~~~y~p~~S~~~c~s~~c~~~~~ 139 (436)
.+||.+ +.+..|+++|.||||+|++.|+|||||+++||+|. +|. .|.. ++.|+|++|. +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~~--~~~y~p~~Ss------T~~~--- 69 (97)
T 1lya_A 4 PEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWI--HHKYNSDKSS------TYVK--- 69 (97)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHT--SCCBCGGGCT------TCEE---
T ss_pred eEeeEE--CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccCC--CCCCCchhCC------Ccee---
Confidence 467764 35679999999999999999999999999999998 897 6864 5789998872 2222
Q ss_pred CCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEee
Q 013772 140 PGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFN 175 (436)
Q Consensus 140 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~ 175 (436)
..|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 70 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 70 ---------NGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---------EEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---------CCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 3579999999995 9999999999995
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.67 E-value=1.4e-16 Score=121.70 Aligned_cols=73 Identities=21% Similarity=0.408 Sum_probs=60.0
Q ss_pred ccceEEEEEeCCCcceEEEEcCceeEEEeCC--CeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772 348 YFKSLALSFTDGKTRTLFELTTEAYLIISNR--GNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN 424 (436)
Q Consensus 348 ~~P~i~f~f~~g~~~~~~~i~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~ 424 (436)
.+|+|+|+|+| .+++|+|++|+++... +..|+ +++........+.||||+.|||++|+|||++++|||||+++
T Consensus 12 ~~P~i~f~~gg----~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 12 SMPNVSFTIGG----KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GCCCEEEEETT----EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcEEEEECC----EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 47999999986 9999999999997643 36896 57664311124689999999999999999999999999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.19 E-value=0.39 Score=39.20 Aligned_cols=27 Identities=11% Similarity=0.038 Sum_probs=24.7
Q ss_pred ceeeChhhhcceEEEEECCCCEEEEEe
Q 013772 396 LNVIGDISMQDRVVIYDNEKQRIGWMP 422 (436)
Q Consensus 396 ~~iLG~~fl~~~yvvfD~~~~riGfa~ 422 (436)
..|||..||+++-+..|+.++++-|..
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~~ 135 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIAE 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEETT
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEcc
Confidence 379999999999999999999999963
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.74 E-value=0.33 Score=39.81 Aligned_cols=28 Identities=11% Similarity=-0.044 Sum_probs=25.4
Q ss_pred ceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772 396 LNVIGDISMQDRVVIYDNEKQRIGWMPA 423 (436)
Q Consensus 396 ~~iLG~~fl~~~yvvfD~~~~riGfa~~ 423 (436)
..|||..||+.+-.+.|++++++-|...
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 4799999999999999999999998753
No 40
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=83.72 E-value=1.1 Score=34.08 Aligned_cols=26 Identities=31% Similarity=0.351 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceEEe
Q 013772 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQ 104 (436)
Q Consensus 77 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~ 104 (436)
=++.+.|| .|.+.+++|||++++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 35779999 589999999999999997
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=83.45 E-value=1.3 Score=33.44 Aligned_cols=27 Identities=30% Similarity=0.196 Sum_probs=23.2
Q ss_pred EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
++.+.|| .|.+++++|||.+++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 4678998 59999999999999988754
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=82.03 E-value=1.2 Score=36.19 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=26.9
Q ss_pred CCeeEEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
..+.+++++.|+ ++++.++||||++.+.+...
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 355799999998 57999999999999988643
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=80.30 E-value=1.7 Score=33.45 Aligned_cols=29 Identities=28% Similarity=0.318 Sum_probs=24.2
Q ss_pred EEEEEeC---CCCceEEEEEecCCCceEEecC
Q 013772 78 NVTVYVG---QPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 78 ~~~i~iG---tP~q~~~v~~DTGSs~~wv~~~ 106 (436)
.+.+.|| +|+|.+..++|||.+++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4555665 8899999999999999999865
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=79.18 E-value=2 Score=32.30 Aligned_cols=27 Identities=33% Similarity=0.322 Sum_probs=23.2
Q ss_pred EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
++.+.|| .|.+..++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5678998 69999999999999988654
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=73.53 E-value=3.2 Score=32.18 Aligned_cols=24 Identities=33% Similarity=0.491 Sum_probs=21.5
Q ss_pred EEeCCCCceEEEEEecCCCceEEecC
Q 013772 81 VYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 81 i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
+.|| .|.++.++|||.+++-+...
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EEEC--CEEEEEEecCCCCcEEEccc
Confidence 8898 59999999999999998754
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=72.23 E-value=3.3 Score=33.69 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=26.8
Q ss_pred CeeEEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
...|++++.|. .+++.++||||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 34799999997 58999999999999998764
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=69.46 E-value=5.1 Score=30.86 Aligned_cols=27 Identities=19% Similarity=0.401 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
.+.+.|| .|.+..++|||.+++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 5678888 59999999999999999865
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=59.81 E-value=8.8 Score=30.46 Aligned_cols=29 Identities=28% Similarity=0.313 Sum_probs=24.3
Q ss_pred eEEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 76 YYNVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
.=++.+.|+ .|.+..++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 456778998 58999999999999988754
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=53.70 E-value=12 Score=32.11 Aligned_cols=28 Identities=29% Similarity=0.134 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 77 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
-.+.+.|| .|.+..++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 46789999 59999999999999988643
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=49.82 E-value=13 Score=29.06 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=17.3
Q ss_pred CceEEEEEecCCCceEEecC
Q 013772 87 PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 87 ~q~~~v~~DTGSs~~wv~~~ 106 (436)
.|.+..++|||.+++-+...
T Consensus 29 gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEEECTTCSSCEEETT
T ss_pred CEEEEEEecCCCCcEEEecc
Confidence 47789999999999999864
No 51
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=40.79 E-value=35 Score=29.77 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=23.6
Q ss_pred eEEEE---EEeCCC-----CceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQP-----PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.++ |.||.. .....++||||++.+++|..
T Consensus 189 ~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 189 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred eEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 57665 678752 34578999999999999864
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.57 E-value=45 Score=28.45 Aligned_cols=28 Identities=29% Similarity=0.134 Sum_probs=23.5
Q ss_pred EEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772 77 YNVTVYVGQPPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 77 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 106 (436)
=.+++.|| .|.+..++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 35788998 59999999999999988643
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=29.42 E-value=40 Score=31.00 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=24.6
Q ss_pred eeEEEE---EEeCC---CCceEEEEEecCCCceEEecC
Q 013772 75 GYYNVT---VYVGQ---PPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 75 ~~Y~~~---i~iGt---P~q~~~v~~DTGSs~~wv~~~ 106 (436)
++|.++ |.||. +.....++||||++.+++|..
T Consensus 193 ~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 193 GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp SSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 356665 67876 245789999999999999965
No 54
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=28.66 E-value=49 Score=28.65 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=23.4
Q ss_pred eEEE---EEEeCCC----CceEEEEEecCCCceEEecC
Q 013772 76 YYNV---TVYVGQP----PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.+ .|+||.- .....+++|||++.+++|..
T Consensus 100 ~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 100 YWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 5655 4678753 24578999999999999965
No 55
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=27.12 E-value=61 Score=30.11 Aligned_cols=44 Identities=25% Similarity=0.349 Sum_probs=30.6
Q ss_pred CCCcEEEEcccCCCCceeeEeeEEEEC--CEEeccCCCCEEEeccccccccCHH
Q 013772 251 SSRVVWTSMSSDYTKYYSPGVAELFFG--GKTTGLKNLPVVFDSGSSYTYLSHV 302 (436)
Q Consensus 251 ~~~~~~~p~~~~~~~~~~v~l~~i~v~--g~~i~~~~~~~iiDSGTt~~~lp~~ 302 (436)
++.+...|+.......|.+. |.|| .+. ..++||||++.+.+|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP~q~-----~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTPGQD-----FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTTTEE-----EEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCCCcE-----EEEEEcCCCCCeEECCC
Confidence 35666788875444666554 6777 343 36899999999999873
No 56
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=25.51 E-value=77 Score=30.95 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=23.6
Q ss_pred eEEEE---EEeCC-----CCceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQ-----PPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.+. |.||. +.....+++|||++.+++|..
T Consensus 232 ~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 232 YWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred eEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 56665 67775 234678999999999999954
No 57
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=24.22 E-value=65 Score=29.46 Aligned_cols=31 Identities=29% Similarity=0.479 Sum_probs=23.1
Q ss_pred eEEEE---EEeCCC--CceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQP--PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGtP--~q~~~v~~DTGSs~~wv~~~ 106 (436)
.|.+. |+||.+ .....++||||++.+++|..
T Consensus 194 ~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 194 WWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp SCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 45554 677762 34568999999999999964
No 58
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=24.21 E-value=80 Score=28.76 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=23.2
Q ss_pred eEEEE---EEeCC-CCceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQ-PPKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGt-P~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.++ |.||. +.....++||||++.+++|..
T Consensus 190 ~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 190 FWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp SCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred eEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 46554 56775 334578999999999999965
No 59
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=23.95 E-value=70 Score=29.14 Aligned_cols=42 Identities=21% Similarity=0.468 Sum_probs=28.3
Q ss_pred CcEEEEcccCCCCceeeEeeEEEECC--EEeccCCCCEEEeccccccccCHH
Q 013772 253 RVVWTSMSSDYTKYYSPGVAELFFGG--KTTGLKNLPVVFDSGSSYTYLSHV 302 (436)
Q Consensus 253 ~~~~~p~~~~~~~~~~v~l~~i~v~g--~~i~~~~~~~iiDSGTt~~~lp~~ 302 (436)
++...|+.......|.+ .|.||. +. ..++||||++.+.+|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP~q~-----~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTPPQE-----FTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTTTEE-----EEEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCCCeE-----EEEEEeCCccceEEcCC
Confidence 45556776433455654 467763 33 36999999999999864
No 60
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.45 E-value=84 Score=28.72 Aligned_cols=31 Identities=26% Similarity=0.346 Sum_probs=23.6
Q ss_pred eEEEE---EEeCCC---CceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQP---PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.++ |.||.- .....++||||++.+++|..
T Consensus 193 ~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 193 FWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp SCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 46554 678763 34678999999999999965
No 61
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=22.62 E-value=37 Score=31.27 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=23.4
Q ss_pred eeEEEE---EEeCCC---CceEEEEEecCCCceEEecC
Q 013772 75 GYYNVT---VYVGQP---PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 75 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~ 106 (436)
++|.++ |.||.- .....++||||++.+++|..
T Consensus 193 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 193 DSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp TSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred CEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 356554 778752 23468999999999999965
No 62
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=22.27 E-value=88 Score=28.52 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=23.7
Q ss_pred eEEEE---EEeCCC---CceEEEEEecCCCceEEecC
Q 013772 76 YYNVT---VYVGQP---PKPYFLDLDTGSDLIWLQCD 106 (436)
Q Consensus 76 ~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~ 106 (436)
+|.++ |.||.- .+...++||||++.+++|..
T Consensus 189 ~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 189 YWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp SCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred eEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 56554 678762 35678999999999999964
Done!