Query         013772
Match_columns 436
No_of_seqs    299 out of 1409
Neff          9.3 
Searched_HMMs 13730
Date          Mon Mar 25 16:49:46 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013772.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013772hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2apra_ b.50.1.2 (A:) Acid pro 100.0 5.9E-54 4.3E-58  412.1  29.2  306   64-423     5-323 (325)
  2 g1htr.1 b.50.1.2 (P:,B:) Pepsi 100.0 8.7E-55 6.3E-59  425.7  21.0  302   72-423    52-371 (372)
  3 d3psga_ b.50.1.2 (A:) Pepsin(o 100.0 1.5E-53 1.1E-57  416.4  26.6  307   65-423    48-369 (370)
  4 d1dpja_ b.50.1.2 (A:) Acid pro 100.0 3.4E-53 2.5E-57  407.4  28.2  310   62-423     2-328 (329)
  5 d1j71a_ b.50.1.2 (A:) Acid pro 100.0 6.5E-53 4.7E-57  406.2  26.5  300   74-433    11-333 (334)
  6 d1am5a_ b.50.1.2 (A:) Pepsin(o 100.0 1.2E-51 8.8E-56  395.7  30.2  308   64-423     3-323 (324)
  7 d1oewa_ b.50.1.2 (A:) Endothia 100.0   2E-52 1.5E-56  402.1  24.6  308   62-422     5-329 (330)
  8 d1smra_ b.50.1.2 (A:) Chymosin 100.0 1.9E-51 1.4E-55  396.2  22.4  311   64-424     6-335 (335)
  9 d1eaga_ b.50.1.2 (A:) Acid pro 100.0 4.8E-51 3.5E-55  394.5  24.4  312   63-433     3-340 (342)
 10 d1miqa_ b.50.1.2 (A:) Plasmeps 100.0 6.8E-51   5E-55  398.1  23.6  306   65-425    52-373 (373)
 11 d1mppa_ b.50.1.2 (A:) Pepsin { 100.0 1.1E-49 7.7E-54  387.3  29.5  323   63-430     3-357 (357)
 12 d2qp8a1 b.50.1.2 (A:60-446) be 100.0 1.1E-49   8E-54  391.4  28.9  324   73-433    12-369 (387)
 13 d1t6ex_ b.50.1.2 (X:) Xylanase 100.0 4.9E-49 3.6E-53  385.9  30.0  340   63-426     3-375 (381)
 14 d1hrna_ b.50.1.2 (A:) Chymosin 100.0 1.7E-49 1.2E-53  382.8  23.8  311   63-424     5-337 (337)
 15 d1izea_ b.50.1.2 (A:) Acid pro 100.0 3.4E-49 2.5E-53  378.4  23.5  304   61-423     5-322 (323)
 16 d1wkra_ b.50.1.2 (A:) Acid pro 100.0 5.2E-48 3.8E-52  372.9  26.9  303   64-430     4-339 (340)
 17 d1bxoa_ b.50.1.2 (A:) Acid pro 100.0 2.6E-48 1.9E-52  372.2  22.7  302   62-423     6-322 (323)
 18 d3cmsa_ b.50.1.2 (A:) Chymosin 100.0 7.7E-48 5.6E-52  368.5  25.5  308   61-423     2-322 (323)
 19 d2bjua1 b.50.1.2 (A:1-329) Pla 100.0 4.1E-48   3E-52  371.5  23.4  309   63-426     4-328 (329)
 20 g1b5f.1 b.50.1.2 (A:,B:) Plant 100.0 7.9E-47 5.7E-51  362.1  27.3  306   64-423     4-325 (326)
 21 g1lya.1 b.50.1.2 (A:,B:) Cathe 100.0 2.2E-46 1.6E-50  360.4  29.1  314   63-423     3-337 (338)
 22 d1qdma2 b.50.1.2 (A:2-247,A:24 100.0 3.8E-46 2.8E-50  358.5  24.8  309   64-423     6-336 (337)
 23 d2nmza1 b.50.1.1 (A:1-99) Huma  79.3    0.98 7.2E-05   31.7   3.9   27   78-106    10-36  (99)
 24 d4fiva_ b.50.1.1 (A:) Feline i  78.0     1.1 7.9E-05   32.8   4.1   27   78-106    12-38  (113)
 25 d3ecga1 b.50.1.1 (A:1-99) Huma  77.2     1.2   9E-05   31.1   3.9   27   78-106    10-36  (99)
 26 d2fmba_ b.50.1.1 (A:) EIAV pro  76.1     1.3 9.7E-05   31.8   4.1   27   78-106    10-36  (104)
 27 d1hvca_ b.50.1.1 (A:) Human im  56.1     4.8 0.00035   31.8   3.8   32  265-301   108-139 (203)
 28 d1nsoa_ b.50.1.1 (A:) Mason-Pf  51.9     2.9 0.00021   30.1   1.8   26   79-106    12-37  (107)
 29 d1bxoa_ b.50.1.2 (A:) Acid pro  49.4     7.4 0.00054   33.3   4.6   41  252-302     4-44  (323)
 30 d3cmsa_ b.50.1.2 (A:) Chymosin  43.4     5.7 0.00042   34.0   2.7   44  252-301     1-44  (323)
 31 d1izea_ b.50.1.2 (A:) Acid pro  37.9      13 0.00092   31.7   4.2   41  252-302     4-44  (323)
 32 d1hvca_ b.50.1.1 (A:) Human im  36.9      16  0.0012   28.6   4.1   29   76-106   112-140 (203)
 33 d2fmba_ b.50.1.1 (A:) EIAV pro  30.3      18  0.0013   25.4   3.2   33  266-303     5-37  (104)
 34 d1oewa_ b.50.1.2 (A:) Endothia  27.3      49  0.0036   27.9   6.4   28   79-106   200-230 (330)
 35 g1b5f.1 b.50.1.2 (A:,B:) Plant  24.0      14   0.001   31.3   1.9   38  258-301     6-43  (326)
 36 d1t6ex_ b.50.1.2 (X:) Xylanase  23.9      20  0.0015   31.2   3.0   33  257-300     5-38  (381)
 37 d2rspa_ b.50.1.1 (A:) Rous sar  23.8      18  0.0013   26.4   2.1   20   87-106    29-48  (124)
 38 d2apra_ b.50.1.2 (A:) Acid pro  21.8      53  0.0038   27.6   5.4   27   80-106   201-229 (325)
 39 d1miqa_ b.50.1.2 (A:) Plasmeps  21.5      19  0.0014   31.3   2.3   32   75-106   237-271 (373)
 40 d1mppa_ b.50.1.2 (A:) Pepsin {  20.6      50  0.0037   28.1   5.0   18   89-106   227-244 (357)
 41 d1dpja_ b.50.1.2 (A:) Acid pro  20.5      22  0.0016   30.1   2.4   41  256-302     4-44  (329)

No 1  
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=100.00  E-value=5.9e-54  Score=412.11  Aligned_cols=306  Identities=22%  Similarity=0.360  Sum_probs=251.0

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQH  143 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~  143 (436)
                      .+|+.... .+..|+++|.||||+|++.|+|||||+++||+|. +|..|..+. +.|+|++|.      +++.       
T Consensus         5 ~vpl~~~~-~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~-~C~~c~~~~-~~y~~~~Ss------T~~~-------   68 (325)
T d2apra_           5 TVPMTDYG-NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNCGSGQ-TKYDPNQSS------TYQA-------   68 (325)
T ss_dssp             EEEEEEET-TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSCCTTS-CCBCGGGCT------TCEE-------
T ss_pred             EEEeEecC-CCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCC-CCCccccCC-CccCcccCC------ceeE-------
Confidence            46776321 2458999999999999999999999999999999 999997653 579998872      2332       


Q ss_pred             CCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC-------CcH
Q 013772          144 KCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK-------SSI  216 (436)
Q Consensus       144 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~-------~s~  216 (436)
                           ..|.|.+.|++|+.+.|.+++|++++    ++..+.++.|+++............+||+|||+..       .++
T Consensus        69 -----~~~~~~~~y~~g~~~~G~~~~D~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~~~~~~~~~~~~~  139 (325)
T d2apra_          69 -----DGRTWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP  139 (325)
T ss_dssp             -----EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred             -----CCeEEEEEeCCCCeEEEEEEeeeEEe----eeeeccCcceeeeeeecccccccccCcccccccccccccccCCcc
Confidence                 46799999999988999999999999    56778899999998752223455789999999763       369


Q ss_pred             HHHhhhcccc-ceeeEEEeCC---CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEE
Q 013772          217 VSQLHSQKLI-RNVVGHCLSG---RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVF  290 (436)
Q Consensus       217 ~~ql~~~g~i-~~~Fs~~l~~---~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~ii  290 (436)
                      +.++.+++.| +++||+||.+   ...|.|+||+++  +..+++.|+|+.. ...+|.|.++++.+++..+.. +..++|
T Consensus       140 ~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~-~~~~~~v~l~~i~i~~~~~~~-~~~~ii  217 (325)
T d2apra_         140 MDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN-SRGWWGITVDRATVGTSTVAS-SFDGIL  217 (325)
T ss_dssp             HHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC-TTSSCEEEECEEEETTEEEEC-CEEEEE
T ss_pred             hhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecC-CCceEEEEEeeEEECCEeecc-eeeeec
Confidence            9999999999 8999999973   456899999865  5679999999973 457999999999999998764 578999


Q ss_pred             eccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCc
Q 013772          291 DSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTE  370 (436)
Q Consensus       291 DSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~  370 (436)
                      ||||++++||.+++++|.+.+.+...      . ...+..+|...            .+|+|+|+|++    .++.|+|+
T Consensus       218 DSGt~~~~lp~~~~~~l~~~~~~~~~------~-~~~~~~~C~~~------------~~p~i~f~f~g----~~~~i~~~  274 (325)
T d2apra_         218 DTGTTLLILPNNIAASVARAYGASDN------G-DGTYTISCDTS------------AFKPLVFSING----ASFQVSPD  274 (325)
T ss_dssp             CTTCSSEEEEHHHHHHHHHHHTCEEC------S-SSCEEECSCGG------------GCCCEEEEETT----EEEEECGG
T ss_pred             cCCCccccCCHHHHHHHHHHhCCccc------C-CCceeecccCC------------CCCcEEEEECC----EEEEEChH
Confidence            99999999999999999998865332      1 12223347532            37999999986    99999999


Q ss_pred             eeEEEeCCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          371 AYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       371 ~y~~~~~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      +|+++..++.||++|....    .+.+|||++|||++|+|||+|++||||||+
T Consensus       275 ~y~~~~~~~~C~~~i~~~~----~~~~iLG~~flr~~y~vfD~~~~~IGfAp~  323 (325)
T d2apra_         275 SLVFEEFQGQCIAGFGYGN----WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV  323 (325)
T ss_dssp             GGEEEEETTEEEESEEEES----SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             HeEEecCCCEEEEEEccCC----CCCEEECHHHhCcEEEEEECCCCEEeEEEc
Confidence            9999876666567887654    467899999999999999999999999996


No 2  
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=100.00  E-value=8.7e-55  Score=425.69  Aligned_cols=302  Identities=22%  Similarity=0.415  Sum_probs=250.1

Q ss_pred             cCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCC
Q 013772           72 YPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQC  151 (436)
Q Consensus        72 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~  151 (436)
                      +.+..|+++|+||||||++.|++||||+++||+|. +|..|..+.++.|+|++|.      +|..            ..|
T Consensus        52 ~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~-~C~~~~~~~~~~y~~~~Ss------t~~~------------~~~  112 (372)
T g1htr.1          52 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACTSHSRFNPSESS------TYST------------NGQ  112 (372)
T ss_dssp             GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE------------EEE
T ss_pred             ccCCeEEEEEEEcCCCeEEEEEEeCCCCceeeccC-CCCCccccCCCCCCccccC------cccc------------CCc
Confidence            45779999999999999999999999999999999 9999988889999998872      2222            467


Q ss_pred             eeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------cHHHHhhhc
Q 013772          152 DYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------SIVSQLHSQ  223 (436)
Q Consensus       152 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------s~~~ql~~~  223 (436)
                      .+.+.|++| +++|.+++|+|++    ++..+.++.|+++... .+  +.....+||+|||++..      +++.+|.++
T Consensus       113 ~~~i~Yg~G-s~~G~~~~d~v~~----~~~~~~~~~f~~~~~~-~~~~~~~~~~~Gi~Gl~~~~~~~~~~~~~~~~l~~~  186 (372)
T g1htr.1         113 TFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENE-PGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQE  186 (372)
T ss_dssp             EEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSC-SSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHT
T ss_pred             eeEEecCCe-EEEEEEEeeeeee----ccceeCceEEEEEEec-cccccccccccCcccccCCccccCCcchhhhHHHhc
Confidence            999999999 7899999999999    5667889999999875 33  44567899999998753      589999999


Q ss_pred             ccc-ceeeEEEeCC---CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC--CCCEEEecccc
Q 013772          224 KLI-RNVVGHCLSG---RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK--NLPVVFDSGSS  295 (436)
Q Consensus       224 g~i-~~~Fs~~l~~---~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~--~~~~iiDSGTt  295 (436)
                      |.| +++||+||..   ...|.|+||+.+  +..+++.|+|+..  ..+|.|.+++|.|+++.+...  ...+||||||+
T Consensus       187 g~i~~~~Fs~~l~~~~~~~~g~l~~Gg~d~~~~~g~~~~~p~~~--~~~~~v~l~~i~vg~~~~~~~~~~~~aiiDSGtt  264 (372)
T g1htr.1         187 GALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ--ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTS  264 (372)
T ss_dssp             TCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS--SSSCEEEECEEEETTEECCTTTTCEEEEECTTCC
T ss_pred             CCcccceeeEEeccCCCCCcceEecCCcCcccccCceeEeeecc--ccceEEeeeeEEECCEEeeeecCCceEEEeCCCC
Confidence            999 8999999974   245899999865  4568999999974  489999999999999987653  35799999999


Q ss_pred             ccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCceeEEE
Q 013772          296 YTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEAYLII  375 (436)
Q Consensus       296 ~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~y~~~  375 (436)
                      +++||.+++++|.+++.+....       ......+|...           ..+|+|+|+|+|    .++.|+|++|+++
T Consensus       265 ~~~lp~~~~~~l~~~~~~~~~~-------~~~~~~~C~~~-----------~~~P~i~f~f~g----~~~~l~~~~yi~~  322 (372)
T g1htr.1         265 LLTVPQQYMSALLQATGAQEDE-------YGQFLVNCNSI-----------QNLPSLTFIING----VEFPLPPSSYILS  322 (372)
T ss_dssp             SEEEEGGGHHHHHHHHTCEECT-------TSCEEECGGGG-----------GGSCCEEEEETT----EEEEECHHHHEEE
T ss_pred             cEEccHHHHHHHHHHhCCeecc-------CCcEEeecccc-----------CcCCcEEEEECC----EEEEECHHHeEEe
Confidence            9999999999999998664331       12233457643           248999999985    9999999999987


Q ss_pred             eCCCeEEEEEEeCCc--CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          376 SNRGNVCLGILNGAE--VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       376 ~~~~~~Cl~~~~~~~--~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                       .++.+|+++.....  ....+.||||+.|||++|+|||++++|||||++
T Consensus       323 -~~~~c~~~i~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfA~A  371 (372)
T g1htr.1         323 -NNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATA  371 (372)
T ss_dssp             -CSSCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             -cCCEEEEEEEecccCCCCCCccEEEcHHhhCCEEEEEECCCCEEEEEec
Confidence             44556677765321  123467999999999999999999999999996


No 3  
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00  E-value=1.5e-53  Score=416.36  Aligned_cols=307  Identities=20%  Similarity=0.390  Sum_probs=250.1

Q ss_pred             EEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 013772           65 FRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHK  144 (436)
Q Consensus        65 ~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~  144 (436)
                      .||.+  +.+..|+++|.||||||++.|+|||||+++||+|. +|..|..+.++.|+|++|.      +|+.        
T Consensus        48 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~-~C~~~~~~~~~~yd~~~Ss------t~~~--------  110 (370)
T d3psga_          48 EPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFEA--------  110 (370)
T ss_dssp             CTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCEE--------
T ss_pred             ccccc--ccCCEEEEEEEEcCCCeEEEEEEeCCCCCeEEECc-cCCCcccccccccCCCccc------cccc--------
Confidence            45553  35679999999999999999999999999999999 9999998999999998882      2332        


Q ss_pred             CCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC------cH
Q 013772          145 CEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS------SI  216 (436)
Q Consensus       145 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~------s~  216 (436)
                          ..|.|.+.|++| ++.|.++.|++.+    ++..+.++.|||++.. .+  +.....+||+|||++..      ++
T Consensus       111 ----~~~~~~~~Yg~G-s~~G~~~~d~~~~----~~~~~~~~~f~~~~~~-~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~  180 (370)
T d3psga_         111 ----TSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETE-PGSFLYYAPFDGILGLAYPSISASGATPV  180 (370)
T ss_dssp             ----EEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSC-CCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred             ----CCCcEEEEeCCc-eEEEEEEEEEEee----eceeeeeeEEEEEeec-cCceecccccccccccccCcccccCCCch
Confidence                467999999999 7999999999999    5677899999999876 33  34457899999998743      58


Q ss_pred             HHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-CCCEEE
Q 013772          217 VSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-NLPVVF  290 (436)
Q Consensus       217 ~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-~~~~ii  290 (436)
                      +.+|.++++| +++||+|+..  ..+|.|+||+.+  +..+++.|+|+...  .+|.|.++++.++|+.+... ...++|
T Consensus       181 ~~~l~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~l~~~p~~~~--~~w~v~~~~i~v~g~~~~~~~~~~aii  258 (370)
T d3psga_         181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE--GYWQITLDSITMDGETIACSGGCQAIV  258 (370)
T ss_dssp             HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE--TTEEEEECEEESSSSEEECTTCEEEEE
T ss_pred             hhhhhhhcccccceeEEEeecCCCCCceEecCCcCchhcccceeEEeeccc--ceEEEEEeeEEeCCeEEecCCCccEEE
Confidence            9999999999 8999999984  457899999865  56789999999753  89999999999999877653 468999


Q ss_pred             eccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCc
Q 013772          291 DSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTE  370 (436)
Q Consensus       291 DSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~  370 (436)
                      ||||++++||++++++|.+++.+...      . ......+|+...           .+|+|+|+|+|    .++.|+|+
T Consensus       259 DSGTs~~~lp~~~~~~i~~~l~~~~~------~-~~~~~~~C~~~~-----------~~P~l~f~f~g----~~~~l~~~  316 (370)
T d3psga_         259 DTGTSLLTGPTSAIANIQSDIGASEN------S-DGEMVISCSSID-----------SLPDIVFTIDG----VQYPLSPS  316 (370)
T ss_dssp             CTTCCSEEEEHHHHHHHHHHTTCEEC------T-TCCEECCGGGGG-----------GCCCEEEEETT----EEEEECHH
T ss_pred             ecCCceEeCCHHHHHHHHHHhCCeee------c-CCcEEEeccccC-----------CCceEEEEECC----EEEEEChH
Confidence            99999999999999999998865432      1 223344587542           38999999975    99999999


Q ss_pred             eeEEEeCCCeEEEEEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          371 AYLIISNRGNVCLGILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       371 ~y~~~~~~~~~Cl~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      +|+++.. +.+++++..... ....+.||||++|||++|+|||++++||||||+
T Consensus       317 ~yi~~~~-~~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  369 (370)
T d3psga_         317 AYILQDD-DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV  369 (370)
T ss_dssp             HHEEECS-SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             HeEEEcC-CeEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEec
Confidence            9998743 333345543221 123568999999999999999999999999996


No 4  
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=100.00  E-value=3.4e-53  Score=407.36  Aligned_cols=310  Identities=19%  Similarity=0.323  Sum_probs=254.3

Q ss_pred             ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772           62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPG  141 (436)
Q Consensus        62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~  141 (436)
                      ...+||++  +.+++|+++|.||||||++.|++||||+++||+|. .|..|..+.++.|||++|.      +++.     
T Consensus         2 ~~~vpl~n--~~~~~Y~~~i~iGtP~q~~~~~iDTGSs~~Wv~~~-~C~~~~c~~~~~f~~~~Ss------t~~~-----   67 (329)
T d1dpja_           2 GHDVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACFLHSKYDHEASS------SYKA-----   67 (329)
T ss_dssp             CEEEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE-----
T ss_pred             CcceEeEE--ccCCEEEEEEEEeCCCeEEEEEEECCcccEEEECC-CCCCccccCCCcCCcccCC------ceeE-----
Confidence            35788874  46789999999999999999999999999999999 9999887788899998872      2222     


Q ss_pred             CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCC-----
Q 013772          142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKS-----  214 (436)
Q Consensus       142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~-----  214 (436)
                             ..|.|.+.|++| ++.|.+++|++++    ++.++.++.|+++... .+  +.....+||+|||+...     
T Consensus        68 -------~~~~~~~~y~~g-s~~G~~~~D~~~~----g~~~~~~~~~~~~~~~-~~~~~~~~~~~Gi~Glg~~~~~~~~~  134 (329)
T d1dpja_          68 -------NGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSE-PGLTFAFGKFDGILGLGYDTISVDKV  134 (329)
T ss_dssp             -------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CHHHHTTCSCSEEEECSCGGGCGGGC
T ss_pred             -------CCeeEEEEccCc-eEEEEEEEEEEEe----cceEEeeEEEEEEeec-cCccccccccccccccccCccccccC
Confidence                   467899999999 7899999999999    5667789999999875 33  44567899999998743     


Q ss_pred             -cHHHHhhhcccc-ceeeEEEeCC-----CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCC
Q 013772          215 -SIVSQLHSQKLI-RNVVGHCLSG-----RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKN  285 (436)
Q Consensus       215 -s~~~ql~~~g~i-~~~Fs~~l~~-----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~  285 (436)
                       +...+|..+++| +++||+||..     ...|.|+||+.+  ++.+++.|+|+..  ..+|.|.+++|.++++.+..++
T Consensus       135 ~~~~~~l~~~~~i~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~--~~~~~v~~~~i~v~~~~~~~~~  212 (329)
T d1dpja_         135 VPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR--KAYWEVKFEGIGLGDEYAELES  212 (329)
T ss_dssp             CCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEECSS
T ss_pred             CchhhhHhhccCcccceEEEEEEecCCCcCCCCceECCCCchhhccCceeEecccc--cceeEEEEeeEEECCeEeeeee
Confidence             467889999999 8999999962     456899999865  4568899999864  4899999999999999998888


Q ss_pred             CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772          286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF  365 (436)
Q Consensus       286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~  365 (436)
                      ..++|||||+++++|+++|++|.+++.....      . ......+|...           ..+|+|+|+|++    .++
T Consensus       213 ~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~------~-~~~~~~~c~~~-----------~~~P~i~f~f~g----~~~  270 (329)
T d1dpja_         213 HGAAIDTGTSLITLPSGLAEMINAEIGAKKG------W-TGQYTLDCNTR-----------DNLPDLIFNFNG----YNF  270 (329)
T ss_dssp             CEEEECTTCSCEEECHHHHHHHHHHHTCEEC------T-TSSEEECGGGG-----------GGCCCEEEEETT----EEE
T ss_pred             cccccCcccceeeCCHHHHHHHHHHhCCccc------c-ceeEEEecccc-----------CccceEEEEECC----EEE
Confidence            9999999999999999999999998854322      1 12222347542           348999999986    999


Q ss_pred             EEcCceeEEEeCCCeEEEEEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          366 ELTTEAYLIISNRGNVCLGILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       366 ~i~~~~y~~~~~~~~~Cl~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      .|+|++|+++.. +.+++++..... ....+.+|||+.|||++|+|||+|++|||||++
T Consensus       271 ~l~p~~y~~~~~-~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a  328 (329)
T d1dpja_         271 TIGPYDYTLEVS-GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKA  328 (329)
T ss_dssp             EECTTTSEEEET-TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             EECHHHeEEecC-CcEEEEEEECccCCCCCCcEEEcHHhhCcEEEEEECCCCEEEEEEe
Confidence            999999998753 444466765432 123467899999999999999999999999996


No 5  
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=100.00  E-value=6.5e-53  Score=406.16  Aligned_cols=300  Identities=20%  Similarity=0.312  Sum_probs=243.2

Q ss_pred             CeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCC--CCCCC-------CCCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 013772           74 TGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPC--VQCVE-------APHPLYRPSNDLVPCEDPICASLHAPGQHK  144 (436)
Q Consensus        74 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c--~~C~~-------~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~  144 (436)
                      +..|+++|.||||||++.|+|||||+++||++. .|  ..|..       ..++.|+|++|.      +++.        
T Consensus        11 ~~~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv~~~-~~~c~~~~~~~~~~~c~~~~~y~~~~Ss------T~~~--------   75 (334)
T d1j71a_          11 GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDT-DAECQVTYSGQTNNFCKQEGTFDPSSSS------SAQN--------   75 (334)
T ss_dssp             SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGSSCCBCGGGCT------TCEE--------
T ss_pred             CCEEEEEEEEcCCCeEEEEEEECCCcceEEeeC-CCCccccccccCCcccccCCcCCcccCC------cccC--------
Confidence            568999999999999999999999999999876 33  23322       123457766551      2222        


Q ss_pred             CCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCCC--------cH
Q 013772          145 CEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGKS--------SI  216 (436)
Q Consensus       145 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~~--------s~  216 (436)
                          ..|.|.+.|++|+++.|.++.|+++|    ++..+.++.||++...      ...+||+|||+...        ++
T Consensus        76 ----~~~~~~~~Y~~g~~~~G~~~~D~~~~----g~~~~~~~~f~~~~~~------~~~~GilGlg~~~~~~~~~~~~~~  141 (334)
T d1j71a_          76 ----LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT------SVDQGIMGIGFTADEAGYNLYDNV  141 (334)
T ss_dssp             ----EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE------SSSSCEEECSCGGGSSTTCCCCCH
T ss_pred             ----CCcCEEEEeCCCceEEEEEEeeEEEE----eeeeccCceeeeeeee------ccccCccccccccccccccccchh
Confidence                46799999999889999999999999    5677889999999884      34689999998743        48


Q ss_pred             HHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEe
Q 013772          217 VSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFD  291 (436)
Q Consensus       217 ~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiD  291 (436)
                      +.+|.+|+.| +++|++|+.+  ...|+|+||+.+  +..+++.|+|+..  ..+|.+.+++|.|++..+.. +..++||
T Consensus       142 ~~~l~~q~~i~~~~fs~~l~~~~~~~g~l~lGg~d~~~~~g~~~~~~~~~--~~~~~v~l~~i~v~g~~~~~-~~~aiiD  218 (334)
T d1j71a_         142 PVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS--SVELRVHLGSINFDGTSVST-NADVVLD  218 (334)
T ss_dssp             HHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC--SSSCEEEEEEEEETTEEEEE-EEEEEEC
T ss_pred             hHHHHhccccccceEEEEeccCCCCCceEEecccChhhcccceeEeeecc--ccceEEeeceEEECCEEecc-ccccccc
Confidence            9999999999 8999999984  456999999764  4568899999974  47899999999999998865 4689999


Q ss_pred             ccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCce
Q 013772          292 SGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEA  371 (436)
Q Consensus       292 SGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~  371 (436)
                      |||++++||+++|++|++++......     ....+.++ |.             ...|.++|+|++   +++++|++++
T Consensus       219 SGt~~~~lp~~~~~~l~~~~~~~~~~-----~~~~~~~~-~~-------------~~~p~i~f~f~~---g~~~~i~~~~  276 (334)
T d1j71a_         219 SGTTITYFSQSTADKFARIVGATWDS-----RNEIYRLP-SC-------------DLSGDAVFNFDQ---GVKITVPLSE  276 (334)
T ss_dssp             TTCSSEEECHHHHHHHHHHHTCEEET-----TTTEEECS-SS-------------CCCSEEEEEEST---TCEEEEEGGG
T ss_pred             CCCcceeccHHHHHHHHHHhCCEEcC-----CCCeeecc-cc-------------ccCCCceEEeCC---CEEEEEChHH
Confidence            99999999999999999988654331     11112222 32             125899999986   4999999999


Q ss_pred             eEEEeCCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772          372 YLIISNRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA  433 (436)
Q Consensus       372 y~~~~~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~  433 (436)
                      |+++..++..|+ ++...      +.+|||++|||++|+|||+|++|||||+++|++.+++++
T Consensus       277 y~~~~~~~~~C~~~i~~~------~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~~~~~~v~~  333 (334)
T d1j71a_         277 LILKDSDSSICYFGISRN------DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISA  333 (334)
T ss_dssp             GEEECSSSSCEEESEEEC------TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred             eEEecCCCCEEEEEecCC------CCcEECHHhhCcEEEEEECCCCEEEEEECCCCCcCCeeE
Confidence            999877677784 66543      468999999999999999999999999999999998876


No 6  
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=100.00  E-value=1.2e-51  Score=395.67  Aligned_cols=308  Identities=19%  Similarity=0.382  Sum_probs=250.9

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQH  143 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~  143 (436)
                      .-+|++  +.++.|+++|.||||+|++.|++||||+++||+|. +|..|..+.++.|||++|.      +|+.       
T Consensus         3 ~~~~~n--~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~-~C~~~~~~~~~~f~p~~Ss------t~~~-------   66 (324)
T d1am5a_           3 TEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACSNHNKFKPRQSS------TYVE-------   66 (324)
T ss_dssp             EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHHTSCCBCGGGCT------TCEE-------
T ss_pred             ceeeec--cCCcEEEEEEEEcCCCeEEEEEEECCCcceEEecC-CCCccccCCCCCCCcccCC------ceeE-------
Confidence            445664  35779999999999999999999999999999999 9999887778899998882      3333       


Q ss_pred             CCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCC------CcH
Q 013772          144 KCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGK------SSI  216 (436)
Q Consensus       144 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~------~s~  216 (436)
                           ..|.+.+.|++| .++|.+++|.+++    ++.+..++.|+|+...... +.....+||+|||++.      .++
T Consensus        67 -----~~~~~~~~y~~g-~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~gLg~~~~~~~~~~~~  136 (324)
T d1am5a_          67 -----TGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPV  136 (324)
T ss_dssp             -----EEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred             -----CCcceEEEecCC-ceEEEEEEeeccc----CcccceeEEEEEeeeeccceeecccccccccccCcccccCCCCcH
Confidence                 357899999999 7999999999999    4567789999999886222 3445689999999764      359


Q ss_pred             HHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEe
Q 013772          217 VSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFD  291 (436)
Q Consensus       217 ~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiD  291 (436)
                      +.++.++++| +++||+||..  ...|.|+||+.+  +..+++.|+|+...  .+|.|.++++.+++..+...+..++||
T Consensus       137 ~~~~~~~~~i~~~~fs~~l~~~~~~~g~l~~Gg~d~~~~~~~~~~~p~~~~--~~~~v~~~~~~~~~~~~~~~~~~~iiD  214 (324)
T d1am5a_         137 FDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE--KYWQVALDGITVNGQTAACEGCQAIVD  214 (324)
T ss_dssp             HHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE--TTEEEEECEEEETTEECCCCCEEEEEC
T ss_pred             HHHHHhccCcccceEEEEecCCCCCCceEEeeccccccccCceEEeecccc--ceEEEEEeeEEeCCcccccCCcceeec
Confidence            9999999999 8999999973  457999999765  56789999999754  799999999999999988888899999


Q ss_pred             ccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCce
Q 013772          292 SGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEA  371 (436)
Q Consensus       292 SGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~  371 (436)
                      |||++++||++++++|.+++.....        .......|..           ...+|+|+|+|++    ..+.|+|++
T Consensus       215 sGts~~~lp~~~~~~l~~~i~~~~~--------~~~~~~~~~~-----------~~~~P~i~f~f~g----~~~~l~~~~  271 (324)
T d1am5a_         215 TGTSKIVAPVSALANIMKDIGASEN--------QGEMMGNCAS-----------VQSLPDITFTING----VKQPLPPSA  271 (324)
T ss_dssp             TTCSSEEECTTTHHHHHHHHTCEEC--------CCCEECCTTS-----------SSSSCCEEEEETT----EEEEECHHH
T ss_pred             cCcccccCCHHHHHHHHHHhCCccc--------CCcccccccc-----------cccCCceEEEECC----EEEEECHHH
Confidence            9999999999999999999854322        1111111211           1248999999975    999999999


Q ss_pred             eEEEeCCCeEEEEEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          372 YLIISNRGNVCLGILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       372 y~~~~~~~~~Cl~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      |+.. .++.+|+++..... ....+.+|||++|||++|+|||+|++|||||++
T Consensus       272 y~~~-~~~~c~~~i~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~igfA~a  323 (324)
T d1am5a_         272 YIEG-DQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA  323 (324)
T ss_dssp             HEEE-SSSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred             hEec-CCCeEEEEEEecCcCCCCCCCEEECHHhhcCEEEEEECCCCEEEEEEc
Confidence            9875 34445566765432 123567899999999999999999999999997


No 7  
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=100.00  E-value=2e-52  Score=402.10  Aligned_cols=308  Identities=18%  Similarity=0.274  Sum_probs=241.5

Q ss_pred             ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772           62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPG  141 (436)
Q Consensus        62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~  141 (436)
                      ...+|+.   +.+..|+++|.||||||++.|+|||||+++||+|. .|..|..+.++.|+|++|.      +++..    
T Consensus         5 ~~~~p~~---~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~c~~~~c~~~~~y~~~~Ss------T~~~~----   70 (330)
T d1oewa_           5 ATTTPID---SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEVDGQTIYTPSKST------TAKLL----   70 (330)
T ss_dssp             EEEEESS---TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEEE----
T ss_pred             ccccccc---ccCCEEEEEEEEcCCCeEEEEEEECCccceEEECC-CCCchhhcCCCccCccccc------ccccc----
Confidence            4556764   34568999999999999999999999999999999 9998887788899998883      22221    


Q ss_pred             CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCCCc-----
Q 013772          142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGKSS-----  215 (436)
Q Consensus       142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s-----  215 (436)
                             +.+.|.+.|++|+.+.|.+++|+|++    ++..+.++.|+++...... +.....+||||||+...+     
T Consensus        71 -------~~~~~~~~Y~~G~~~~G~~~~D~v~~----~~~~~~~~~f~~~~~~~~~~~~~~~~~GilGlg~~~~~~~~~~  139 (330)
T d1oewa_          71 -------SGATWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPT  139 (330)
T ss_dssp             -------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSS
T ss_pred             -------CCCeEEEEeCCCCcEEEEEEEEEEEe----ecceecceEEEEeeeccccccccCCcccccccccCcccccCcc
Confidence                   24589999999988999999999999    5677889999999875211 345678999999987532     


Q ss_pred             ----HHHHhhhcccc-ceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCE
Q 013772          216 ----IVSQLHSQKLI-RNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPV  288 (436)
Q Consensus       216 ----~~~ql~~~g~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~  288 (436)
                          +...+  ++.| .++||+||.++..|.|+||+++  ++.+++.|+|+.. ...+|.|.+++|.++++.+...+..+
T Consensus       140 ~~~~~~~~~--~~~i~~~~fs~~l~~~~~g~l~~Gg~d~~~~~g~~~~~~~~~-~~~~~~v~l~~i~v~~~~~~~~~~~~  216 (330)
T d1oewa_         140 QQKTFFDNA--KASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVST-KQGFWEWTSTGYAVGSGTFKSTSIDG  216 (330)
T ss_dssp             CCCCHHHHH--TTTSSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBC-TTSSCEEEEEEEEETTSCCEEEEEEE
T ss_pred             ccccHHHhh--hhhhcccceeeecccccCCceeecccccccccCcceeeeccC-CCCceEEEEeEEEEEeeeeecCCcce
Confidence                33333  4667 8999999998888999999875  4579999999873 45789999999999998877766789


Q ss_pred             EEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEc
Q 013772          289 VFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELT  368 (436)
Q Consensus       289 iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~  368 (436)
                      +|||||++++||++++++|.+++.....    ... ...+..+|..             .+|+|+|+|++    ..+.||
T Consensus       217 iiDSGts~~~lp~~~~~~i~~~~~~~~~----~~~-~~~~~~~C~~-------------~~P~i~f~f~g----~~~~lp  274 (330)
T d1oewa_         217 IADTGTTLLYLPATVVSAYWAQVSGAKS----SSS-VGGYVFPCSA-------------TLPSFTFGVGS----ARIVIP  274 (330)
T ss_dssp             EECTTCCSEEECHHHHHHHHTTSTTCEE----ETT-TTEEEEETTC-------------CCCCEEEEETT----EEEEEC
T ss_pred             eeccccccccCCHHHHHHHHHHccCccc----Ccc-cceEEecccC-------------CCCcEEEEECC----EEEecC
Confidence            9999999999999999999887754322    111 1222335742             37999999975    999998


Q ss_pred             CceeEEEe--CCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEEC-CCCEEEEEe
Q 013772          369 TEAYLIIS--NRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDN-EKQRIGWMP  422 (436)
Q Consensus       369 ~~~y~~~~--~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~-~~~riGfa~  422 (436)
                      ++.|.+..  ..+..|+ +|....   ..+.+|||++|||++|+|||. +++|||||.
T Consensus       275 ~~~~~~~~~~~~~~~C~~~i~~~~---~~~~~ILG~~flr~~y~vfD~~~~~~IGfA~  329 (330)
T d1oewa_         275 GDYIDFGPISTGSSSCFGGIQSSA---GIGINIFGDVALKAAFVVFNGATTPTLGFAS  329 (330)
T ss_dssp             HHHHEEEESSTTCSEEEESEEEST---TTSSEEECHHHHTTEEEEEECSSSCEEEEEE
T ss_pred             HHHeeEEEecCCCCEEEEEEECCC---CCCCEEECHHHhCCEEEEEECCCCCEEEEec
Confidence            87766643  2345785 666554   345789999999999999998 667999996


No 8  
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.9e-51  Score=396.20  Aligned_cols=311  Identities=18%  Similarity=0.288  Sum_probs=243.0

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE--APHPLYRPSNDLVPCEDPICASLHAPG  141 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~--~~~~~y~p~~S~~~c~s~~c~~~~~~~  141 (436)
                      .++|++  |.+++|+++|.||||||++.|+|||||+++||+|. .|..|..  ..++.|+|++|.      +|+.     
T Consensus         6 ~~~l~n--~~~~~Y~~~i~iGtP~Q~~~l~~DTGSs~~Wv~~~-~C~~~~~~c~~~~~f~~~~Ss------T~~~-----   71 (335)
T d1smra_           6 PVVLTN--YLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPST-KCSRLYLACGIHSLYESSDSS------SYME-----   71 (335)
T ss_dssp             EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCGGGGGSCCBCGGGCT------TCEE-----
T ss_pred             ceeecc--cCCCEEEEEEEECCCCeEEEEEEECCcccEEEEcC-CCCCccccccCCCcCCCccCc------cccc-----
Confidence            466664  56779999999999999999999999999999999 8987654  356789998882      3333     


Q ss_pred             CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC------Cc
Q 013772          142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK------SS  215 (436)
Q Consensus       142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~------~s  215 (436)
                             ..|.|.+.|++| ++.|.+++|++++    ++....+..+++.......+.....+||+|||+..      .+
T Consensus        72 -------~~~~~~~~Y~~g-s~~G~~~~D~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~glg~~~~~~~~~~~  139 (335)
T d1smra_          72 -------NGDDFTIHYGSG-RVKGFLSQDSVTV----GGITVTQTFGEVTQLPLIPFMLAQFDGVLGMGFPAQAVGGVTP  139 (335)
T ss_dssp             -------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred             -------CCCcEEEEecCc-eEEEEEEEEEEEe----cccccccEEEEEEecccccccccccccccccccccccccCCCc
Confidence                   356899999999 7899999999999    45555555554444321123456789999999875      35


Q ss_pred             HHHHhhhcccc-ceeeEEEeCC---CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-CCCE
Q 013772          216 IVSQLHSQKLI-RNVVGHCLSG---RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-NLPV  288 (436)
Q Consensus       216 ~~~ql~~~g~i-~~~Fs~~l~~---~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-~~~~  288 (436)
                      +..+|.+++.| ++.|++||..   ...|.|+||+.+  +..+++.|+|+..  ..+|.|.+.+|.+++..+... ...+
T Consensus       140 ~~~~l~~~~~i~~~~fs~~l~~~~~~~~g~l~~G~~d~~~~~~~~~~~~~~~--~~~~~v~~~~i~~~~~~~~~~~~~~~  217 (335)
T d1smra_         140 VFDHILSQGVLKEKVFSVYYNRGPHLLGGEVVLGGSDPQHYQGDFHYVSLSK--TDSWQITMKGVSVGSSTLLCEEGCEV  217 (335)
T ss_dssp             HHHHHHHTTCBSSSEEEEEECCSSSSCCEEEEESSCCGGGEEEEEEEEECSB--TTTTEEEEEEEEETTSCCBCTTCEEE
T ss_pred             hHHHHHHhcCccccceeEEeccCCCccceeEeccccCcccccCceeeeeccc--ccceEEEEeEEEECCeeEeccCCceE
Confidence            88999999999 8999999974   346899999865  4568999999964  378999999999999876543 4689


Q ss_pred             EEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEc
Q 013772          289 VFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELT  368 (436)
Q Consensus       289 iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~  368 (436)
                      +|||||++++||+++|++|.+++.+....       .......|+..           ..+|.|+|+|++    ..+.|+
T Consensus       218 iiDSGtt~~~lp~~~~~~l~~~~~~~~~~-------~~~~~~~c~~~-----------~~~P~i~f~f~g----~~~~l~  275 (335)
T d1smra_         218 VVDTGSSFISAPTSSLKLIMQALGAKEKR-------LHEYVVSCSQV-----------PTLPDISFNLGG----RAYTLS  275 (335)
T ss_dssp             EECTTBSSEEECHHHHHHHHHHHTCEEEE-------TTEEEEEGGGG-----------GGSCCEEEEETT----EEEEEC
T ss_pred             EEeCCCCcccCCHHHHHHHHHHhCCeecc-------CCceeeccccc-----------CCCCccEEEECC----eEEEEC
Confidence            99999999999999999999988653321       12223347643           248999999975    999999


Q ss_pred             CceeEEEe--CCCeEEE-EEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772          369 TEAYLIIS--NRGNVCL-GILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN  424 (436)
Q Consensus       369 ~~~y~~~~--~~~~~Cl-~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~  424 (436)
                      |++|+++.  ..+..|+ ++..... ....+.+|||++|||++|+|||+|++|||||++|
T Consensus       276 ~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~ak  335 (335)
T d1smra_         276 STDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALAR  335 (335)
T ss_dssp             HHHHBTT----CCCEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             hHHeEEEeccCCCCEEEEEEEecCcCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEEcC
Confidence            99998642  3456784 5554331 1234679999999999999999999999999986


No 9  
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=100.00  E-value=4.8e-51  Score=394.54  Aligned_cols=312  Identities=20%  Similarity=0.292  Sum_probs=244.7

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCC--CCCCC-------CCCCCCCCCCCCCCCCCcc
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPC--VQCVE-------APHPLYRPSNDLVPCEDPI  133 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c--~~C~~-------~~~~~y~p~~S~~~c~s~~  133 (436)
                      +.+++++   .+..|+++|.||||||++.|+|||||+++||+|. .|  ..|..       ..+..|+|++|.      +
T Consensus         3 vp~~l~~---~~~~Y~~~i~iGtP~Q~~~~i~DTGS~~~Wv~~~-~~~c~~~~~~~~~~~~~~~~~y~~~~Ss------t   72 (342)
T d1eaga_           3 VPVTLHN---EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCKQKGTYDPSGSS------A   72 (342)
T ss_dssp             EEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGTTCCBCGGGCT------T
T ss_pred             eeeEecC---CCcEEEEEEEECCCCeEEEEEEECCCcceEEeec-CCCccccccccCccccccCCcCCCccCc------c
Confidence            4556654   3568999999999999999999999999999986 44  22321       123456665551      2


Q ss_pred             cccCCCCCCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC
Q 013772          134 CASLHAPGQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK  213 (436)
Q Consensus       134 c~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~  213 (436)
                      |..            ..|.|.+.|++|+.+.|.++.|+++|    ++.++.++.|++++..      ...+|++|||+..
T Consensus        73 ~~~------------~~~~~~~~Y~~g~~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~------~~~~g~~Glg~~~  130 (342)
T d1eaga_          73 SQD------------LNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDST------SIDQGILGVGYKT  130 (342)
T ss_dssp             CEE------------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE------SSSSCEEECSCGG
T ss_pred             eeE------------CCeeEEEEeCCCceEEEEEEeeEEEe----ceEeeeeeEEEeecee------ecccccccccccc
Confidence            222            46799999999988999999999999    5567889999999874      3468999999763


Q ss_pred             -------CcHHHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEe
Q 013772          214 -------SSIVSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTT  281 (436)
Q Consensus       214 -------~s~~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i  281 (436)
                             .+++.+|.+|+.| +++||+|+.+  ...|.|+||+.+  +..+++.|+|+..  ..+|.|.+++|.|+|+.+
T Consensus       131 ~~~~~~~~~~~~~L~~q~~i~~~~fs~~l~~~~~~~G~l~~Gg~d~~~~~g~~~~~p~~~--~~~w~v~l~~i~vgg~~~  208 (342)
T d1eaga_         131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS--DRELRISLGSVEVSGKTI  208 (342)
T ss_dssp             GCSSCSCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC--SSSCEEEEEEEEETTEEE
T ss_pred             cccCCccCccceehhhcCCccceEEEEEcCCCCCCCceEEEcccCchhccceEEEEeccc--ccceEEEEeeEEECCEEe
Confidence                   3689999999999 8999999974  357999999764  4568899999974  488999999999999999


Q ss_pred             ccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCc
Q 013772          282 GLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKT  361 (436)
Q Consensus       282 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~  361 (436)
                      ..++..+||||||++++||+++|++|.+++.+.....   .........+|.              ..|+|+|+|.+   
T Consensus       209 ~~~~~~~iiDSGts~~~lp~~~~~~l~~~l~~~~~~~---~~~~~~~~~~c~--------------~~p~i~f~f~~---  268 (342)
T d1eaga_         209 NTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD---SNGNSFYEVDCN--------------LSGDVVFNFSK---  268 (342)
T ss_dssp             EEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC---TTSCEEEEEESC--------------CCSEEEEECST---
T ss_pred             cccccccccccCCccccCCHHHHHHHHHHhCcccccc---CCCCceeccccc--------------cCCCEEEEECC---
Confidence            8877889999999999999999999999987654421   110111112242              25899999986   


Q ss_pred             ceEEEEcCceeEEEeCCC-----eEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772          362 RTLFELTTEAYLIISNRG-----NVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA  433 (436)
Q Consensus       362 ~~~~~i~~~~y~~~~~~~-----~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~  433 (436)
                      +..+.|||++|+++....     ..|......     .+.+|||++|||++|+|||++++|||||+++.++.+++++
T Consensus       269 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~-----~~~~ILG~~fl~~~y~vfD~~~~~iGfA~a~~~~~~~~~~  340 (342)
T d1eaga_         269 NAKISVPASEFAASLQGDDGQPYDKCQLLFDV-----NDANILGDNFLRSAYIVYDLDDNEISLAQVKYTSASSISA  340 (342)
T ss_dssp             TCEEEEEGGGGEEEC---CCSCTTEEEECEEE-----CTTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred             CEEEEEChHHeEEEecCCCCceeeEEEEccCC-----CCCcEECHHhhCcEEEEEECCCCEEEEEECCCCCCCCEEe
Confidence            499999999999875322     256544332     3568999999999999999999999999999999888764


No 10 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=100.00  E-value=6.8e-51  Score=398.13  Aligned_cols=306  Identities=19%  Similarity=0.287  Sum_probs=245.9

Q ss_pred             EEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCC
Q 013772           65 FRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHK  144 (436)
Q Consensus        65 ~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~  144 (436)
                      ++|.+  +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|..+.++.|+|++|.      +|..        
T Consensus        52 ~~l~n--~~~~~Y~~~I~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss------T~~~--------  114 (373)
T d1miqa_          52 IELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCSIKNLYDSSKSK------SYEK--------  114 (373)
T ss_dssp             CCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGGGSCCBCGGGCT------TCEE--------
T ss_pred             EEeee--ccCCEEEEEEEECCCCEEEEEEEECCchheEEECC-CCCCccccCCCccCCCCCC------ceeE--------
Confidence            45553  46789999999999999999999999999999999 9999988888999998883      3333        


Q ss_pred             CCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC------CcH
Q 013772          145 CEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK------SSI  216 (436)
Q Consensus       145 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~------~s~  216 (436)
                          ..|.+.+.|++| .++|.+++|+|++    ++..+.++.|+++......  +.....+|++|++...      .++
T Consensus       115 ----~~~~~~~~y~~G-~~~G~~~~D~v~i----g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~  185 (373)
T d1miqa_         115 ----DGTKVDITYGSG-TVKGFFSKDLVTL----GHLSMPYKFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPI  185 (373)
T ss_dssp             ----EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEECGGGTTHHHHSCCCEEEECSSCCTTCSSCCCH
T ss_pred             ----CCccEEEEeCCc-EEEEEEEEEEEEE----cCcceEeeEEEEEeccccCccccccccccccccccccccCCCccce
Confidence                467899999999 8999999999999    6677888889887764222  3456789999999874      358


Q ss_pred             HHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEe
Q 013772          217 VSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFD  291 (436)
Q Consensus       217 ~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiD  291 (436)
                      +.++..++.+ +++||+|+..  ...|.++||+.+  +..+++.|+|+..  ..+|.|.+. +.+++....  ...++||
T Consensus       186 ~~~~~~~~~~~~~~fs~~~~~~~~~~g~l~~Gg~d~~~~~g~~~~~pv~~--~~~w~i~l~-~~~~~~~~~--~~~~iiD  260 (373)
T d1miqa_         186 VVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH--DLYWQIDLD-VHFGKQTME--KANVIVD  260 (373)
T ss_dssp             HHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS--SSSSEEEEE-EEETTEEEE--EEEEEEC
T ss_pred             ehhhhhhhccccceEEEEeccCCCCCceeeccCCCchhccceeeEEeccc--cceEEEEEE-EEECcEecC--CcceEec
Confidence            9999999999 8999999984  456899999875  4568999999964  489999985 666776554  4679999


Q ss_pred             ccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCce
Q 013772          292 SGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTEA  371 (436)
Q Consensus       292 SGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~~  371 (436)
                      |||+++++|++++++|.+++......     . ...... |...           ..+|+|+|+|+|    ..+.|+|++
T Consensus       261 TGTs~~~lP~~~~~~l~~~i~~~~~~-----~-~~~~~~-~~~~-----------~~~P~itf~f~g----~~~~l~p~~  318 (373)
T d1miqa_         261 SGTTTITAPSEFLNKFFANLNVIKVP-----F-LPFYVT-TCDN-----------KEMPTLEFKSAN----NTYTLEPEY  318 (373)
T ss_dssp             TTBSSEEECHHHHHHHHHHHTCEECT-----T-SSCEEE-ETTC-----------TTCCCEEEECSS----CEEEECGGG
T ss_pred             cCCceeccCHHHHHHHHHHhCCeecc-----C-CCeeEe-cccc-----------CCCceEEEEECC----EEEEECHHH
Confidence            99999999999999999998654321     1 122222 4322           248999999986    999999999


Q ss_pred             eEEEe--CCCeEE-EEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCC
Q 013772          372 YLIIS--NRGNVC-LGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANC  425 (436)
Q Consensus       372 y~~~~--~~~~~C-l~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c  425 (436)
                      |+.+.  .++..| ++|+....  ..+.||||++|||++|+|||++++|||||+++.
T Consensus       319 y~~~~~~~~~~~C~~~~~~~~~--~~~~~ILG~~fl~~~y~vfD~~~~rIGfA~ak~  373 (373)
T d1miqa_         319 YMNPILEVDDTLCMITMLPVDI--DSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN  373 (373)
T ss_dssp             SEEESSSSSCSEEEESEEECCS--SSSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred             eeEEEEeCCCCEEEEEEEECCC--CCCCEEEcHHhhCcEEEEEECCCCEEEEEEcCC
Confidence            99874  234455 78877542  245799999999999999999999999999873


No 11 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=100.00  E-value=1.1e-49  Score=387.34  Aligned_cols=323  Identities=18%  Similarity=0.293  Sum_probs=251.8

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC-CCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE-APHPLYRPSNDLVPCEDPICASLHAPG  141 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~-~~~~~y~p~~S~~~c~s~~c~~~~~~~  141 (436)
                      ++.|.-.+ +.+++|+++|.||||+|++.|+|||||+++||+|. .|..|.. +.++.|||++|.      +|+.     
T Consensus         3 ~~~~~~~~-~~~~~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv~~~-~C~~~~~c~~~~~f~~~~Ss------T~~~-----   69 (357)
T d1mppa_           3 VDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCVGKRFFDPSSSS------TFKE-----   69 (357)
T ss_dssp             EEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCCSSCCBCGGGCT------TCEE-----
T ss_pred             ccccceec-CCCCEEEEEEEEcCCCeEEEEEEeCCCcceEEccC-CCCCCccccCCCCCCCccCC------cccc-----
Confidence            34553332 46889999999999999999999999999999998 8875432 345689998872      3333     


Q ss_pred             CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecC------CCCCCCCCceeeeecCCC--
Q 013772          142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQV------PGASYHPLDGILGLGKGK--  213 (436)
Q Consensus       142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~------~~~~~~~~~GIlGLg~~~--  213 (436)
                             ..|.+.+.|++| .+.|.+++|++.+    ++..+.++.|++++...      ........+||+|||+..  
T Consensus        70 -------~~~~~~~~y~~g-~~~G~~~~d~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Gl~~~~~~  137 (357)
T d1mppa_          70 -------TDYNLNITYGTG-GANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNT  137 (357)
T ss_dssp             -------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGS
T ss_pred             -------CCcceEEecCCC-cEEEEEEeeeccc----ccceECcEEEEEEEeecccceecccccccccccccccccCCcc
Confidence                   356899999999 8999999999999    56778899999988741      112345689999999874  


Q ss_pred             ----------CcHHHHhhhcccc-ceeeEEEeCC-CCCceEEeCCCC--CCCCCcEEEEcccCCC--CceeeEeeEEEEC
Q 013772          214 ----------SSIVSQLHSQKLI-RNVVGHCLSG-RGGGFLFFGDDL--YDSSRVVWTSMSSDYT--KYYSPGVAELFFG  277 (436)
Q Consensus       214 ----------~s~~~ql~~~g~i-~~~Fs~~l~~-~~~G~l~fG~~~--~~~~~~~~~p~~~~~~--~~~~v~l~~i~v~  277 (436)
                                .+++.+|.++++| +++||+||.+ ...|.|+||+.+  +..+++.|+|+.....  .+|.|.+++|.++
T Consensus       138 ~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~~~G~l~~Gg~d~~~~~~~~~~~pi~~~~~~~~~~~v~l~~i~v~  217 (357)
T d1mppa_         138 AMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKID  217 (357)
T ss_dssp             HHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEET
T ss_pred             ccccccCCCCCCHHHHHHhccccccceEEEEeccCCCCceEECcccChhHcCCceeEEEeccCCCCceeEEEEEeeEEEC
Confidence                      3689999999999 8999999974 567999999865  4679999999986543  5899999999999


Q ss_pred             CEEeccC--CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEE
Q 013772          278 GKTTGLK--NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALS  355 (436)
Q Consensus       278 g~~i~~~--~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~  355 (436)
                      ++.....  ...++|||||++++||++++++|++++.....     .. ......+|....          +..|.++|.
T Consensus       218 g~~~~~~~~~~~~ilDSGts~~~lp~~~~~~i~~~~~~~~~-----~~-~~~~~~~C~~~~----------~~~~~~~~~  281 (357)
T d1mppa_         218 GSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKYQ----------DSKTTFSLV  281 (357)
T ss_dssp             TEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHHT----------TCCCEEEEE
T ss_pred             CeEeeecCCCcceEeeccCccccCCHHHHHHHHHHhcCCcc-----cc-CCceeccccccc----------ccCceEEEE
Confidence            9765432  35789999999999999999999998854332     11 122223476432          236788888


Q ss_pred             EeCC---CcceEEEEcCceeEEEeCC-CeEE-EEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCcc
Q 013772          356 FTDG---KTRTLFELTTEAYLIISNR-GNVC-LGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPK  430 (436)
Q Consensus       356 f~~g---~~~~~~~i~~~~y~~~~~~-~~~C-l~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~  430 (436)
                      |...   .+...+.||+++|+.+... +..| +++.+..    .+.+|||++|||++|+|||++++||||||++.++.++
T Consensus       282 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~c~~~~~~~~----~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~  357 (357)
T d1mppa_         282 LQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG----GNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYEND  357 (357)
T ss_dssp             EECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES----SSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTCCC
T ss_pred             EeccccccccEEEEEchHHeEEEecCCCCEEEEEEcCCC----CCCEEechHHhCCEEEEEECCCCEEEEEECCcCCCCC
Confidence            8743   2356899999999987643 3466 5565543    4678999999999999999999999999999887654


No 12 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-49  Score=391.44  Aligned_cols=324  Identities=18%  Similarity=0.255  Sum_probs=248.6

Q ss_pred             CCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCe
Q 013772           73 PTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQHKCEDPTQCD  152 (436)
Q Consensus        73 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~~c~~~~~~~  152 (436)
                      ..+.|+++|+||||+|++.|+|||||++|||+|. +|..|+    +.|+|++|.      +|+.            ..|.
T Consensus        12 ~~~~Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~~-~c~~~~----~~f~~~~Ss------T~~~------------~~~~   68 (387)
T d2qp8a1          12 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFLH----RYYQRQLSS------TYRD------------LRKG   68 (387)
T ss_dssp             TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTCS----CCCCGGGCT------TCEE------------EEEE
T ss_pred             CCCEEEEEEEECCCCEEEEEEEECCccceEEccC-CCCcCC----CccCcccCC------CcEe------------CCCc
Confidence            4557999999999999999999999999999999 897775    479998872      3333            3568


Q ss_pred             eeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeec-CCCCCCCCCceeeeecCCCC--------cHHHHhhhc
Q 013772          153 YEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQ-VPGASYHPLDGILGLGKGKS--------SIVSQLHSQ  223 (436)
Q Consensus       153 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~-~~~~~~~~~~GIlGLg~~~~--------s~~~ql~~~  223 (436)
                      +.+.|++| .+.|.+++|+|+|+.  +.....++.|++.+.. .........+||||||++..        .+...|.++
T Consensus        69 ~~i~Y~~g-~~~G~~~~D~v~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~~  145 (387)
T d2qp8a1          69 VYVPYTQG-KWEGELGTDLVSIPH--GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQ  145 (387)
T ss_dssp             EEEECSSC-EEEEEEEEEEEECTT--SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred             EEEEeCCc-cEEEEEEEEEEEEcC--CCceeEeEEEEEEEecCCcccccccccccccccccccccCCCCCCchHHHHhhc
Confidence            99999999 899999999999964  2223334445555443 22244567899999998743        367788888


Q ss_pred             cccceeeEEEeCC------------CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-----
Q 013772          224 KLIRNVVGHCLSG------------RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-----  284 (436)
Q Consensus       224 g~i~~~Fs~~l~~------------~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-----  284 (436)
                      +.++++||+|+..            ..+|.|+||+++  ++.++++|+|+..  ..+|.+.+.+|.++++.+...     
T Consensus       146 ~~~~~~fs~~l~~~~~~~~~~~~~~~~~G~l~~Gg~d~~~~~g~~~~~~~~~--~~~~~v~~~~i~v~g~~~~~~~~~~~  223 (387)
T d2qp8a1         146 THVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR--EWYYEVIIVRVEINGQDLKMDCKEYN  223 (387)
T ss_dssp             SCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS--BTTBBCCEEEEEETTEECCCCGGGGG
T ss_pred             cCcceeEeEeeccccccccccccccCCCceeEecccccccccCceEeecccc--cceeEEEEEEEEECCEecccccccCC
Confidence            8889999999963            356899999865  4578999999864  379999999999999998643     


Q ss_pred             CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCC--Ccc
Q 013772          285 NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDG--KTR  362 (436)
Q Consensus       285 ~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g--~~~  362 (436)
                      ...++|||||++++||++++++|.++|.+..................|+....      .....||.++|.|.+.  ..+
T Consensus       224 ~~~aiiDSGts~i~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~------~~~~~fp~~~~~~~~~~~~~~  297 (387)
T d2qp8a1         224 YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT------TPWNIFPVISLYLMGEVTNQS  297 (387)
T ss_dssp             SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC------CCGGGSCCEEEEEECSSTTEE
T ss_pred             ccceEEecCCCeEeCCHHHHHHHHHHhcccccccccCCccccceeeeeeecCC------CccccccceEEEeccccccce
Confidence            46899999999999999999999999988765321111111223345876542      1233589999999863  245


Q ss_pred             eEEEEcCceeEEEeCC----CeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCccccc
Q 013772          363 TLFELTTEAYLIISNR----GNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPKSKA  433 (436)
Q Consensus       363 ~~~~i~~~~y~~~~~~----~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~~~~  433 (436)
                      ..+.|+|++|+.+..+    ...|+.+....   ....+|||++|||++|+|||+|++|||||+++|....++..
T Consensus       298 ~~~~i~p~~y~~~~~~~~~~~~~c~~~~~~~---~~~~~ILG~~Flr~~y~vfD~~~~~IGfA~a~c~~~~~~~~  369 (387)
T d2qp8a1         298 FRITILPQQYLRPVEDVATSQDDCYKFAISQ---SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRT  369 (387)
T ss_dssp             EEEEECHHHHEEEECCTTCCSCEEEEECEEE---ESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCC
T ss_pred             EEEEECHHHheeeccccCCcCceEEEEEeCC---CCCCEEEhHHhhCcEEEEEECCCCEEEEEECCcCCCCCccc
Confidence            7899999999987643    24686655433   24578999999999999999999999999999976666544


No 13 
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=100.00  E-value=4.9e-49  Score=385.92  Aligned_cols=340  Identities=19%  Similarity=0.309  Sum_probs=250.6

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQ  142 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~  142 (436)
                      +.+|++.+. .++.|+++|.||||     |+|||||+++||+|. .|..|..            .+|.+..|.....+..
T Consensus         3 ~~~pi~~~~-~~~~Y~~~i~iGtp-----liiDTGSs~~Wvpc~-~c~~~~~------------~~~~~~~c~~~~~~~~   63 (381)
T d1t6ex_           3 VLAPVTKDP-ATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQPPAE------------IPCSSPTCLLANAYPA   63 (381)
T ss_dssp             EEEEEEECT-TTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTCCCCC------------CBTTSHHHHHHHSSCC
T ss_pred             EEEeecccC-CCCeEEEEEEcCCc-----eEEECCCCceeeccC-CCCCCcc------------cccCCchhhhccCcCC
Confidence            568888765 35789999999998     999999999999998 8887753            3444444443322222


Q ss_pred             CCCCC---------CCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcC----CCceEEeeeeecCCCCCCCCCceeeee
Q 013772          143 HKCED---------PTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRL----NPRLALGCGYDQVPGASYHPLDGILGL  209 (436)
Q Consensus       143 ~~c~~---------~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~----~~~~~Fg~~~~~~~~~~~~~~~GIlGL  209 (436)
                      ..|..         ...+.|.+.|++|+.+.|.+++|+|+++..+....    ..++.|++.............+||+||
T Consensus        64 ~~c~~~~~~~~~~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGi~Gl  143 (381)
T d1t6ex_          64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGL  143 (381)
T ss_dssp             TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEEC
T ss_pred             CCCCCccccCCCCCCCCceeEEEeCCCCEEEEEEEEEEEEecccccccceeeEEeeeeeeccccccccccccCcceeeec
Confidence            22211         14567999999998899999999999975322211    223344554443122345678999999


Q ss_pred             cCCCCcHHHHhhhccccceeeEEEeCCCCCceEEeC--CCC--CCCCCcEEEEcccCCC-CceeeEeeEEEECCEEeccC
Q 013772          210 GKGKSSIVSQLHSQKLIRNVVGHCLSGRGGGFLFFG--DDL--YDSSRVVWTSMSSDYT-KYYSPGVAELFFGGKTTGLK  284 (436)
Q Consensus       210 g~~~~s~~~ql~~~g~i~~~Fs~~l~~~~~G~l~fG--~~~--~~~~~~~~~p~~~~~~-~~~~v~l~~i~v~g~~i~~~  284 (436)
                      |+...+++.||.+++.++++|++|+.+...+...||  +.+  ++.+++.|+|++.+.. .+|.|.+++|.+++..+..+
T Consensus       144 g~~~~s~~~ql~~~~~~~~~fsl~l~~~~~~~~~~~~g~~~~~~~~g~~~~~pi~~~~~~~~~~v~l~~i~v~~~~~~~~  223 (381)
T d1t6ex_         144 ANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVP  223 (381)
T ss_dssp             SSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCC
T ss_pred             CCCCcchHHHHhhhcCcceEEEeecCCCcccceEeecccccccccCCceEEEeeeccCCCceeEEEEEEEeeCCeeeccC
Confidence            999999999999999999999999987666655555  433  3468999999986543 78999999999999988653


Q ss_pred             -----CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCC------ccCCCCCCCCccccCCCCCCcccccccccceEE
Q 013772          285 -----NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSL------KEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLA  353 (436)
Q Consensus       285 -----~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~------~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~  353 (436)
                           ...+++||||++++||+++++++.+++.+.......      ........+..|++......  ......+|.|+
T Consensus       224 ~~~~~~~~~i~DTGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~i~  301 (381)
T d1t6ex_         224 EGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGN--NLGGYAVPNVQ  301 (381)
T ss_dssp             TTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCE--ETTEECCCCEE
T ss_pred             cccccCcceEEecCCceEECCHHHHHHHHHHHHHHhcccccccccccccccccCCcceeeccccccc--cccccccccEE
Confidence                 357999999999999999999999999887653210      11112334556775443111  11234589999


Q ss_pred             EEEeCCCcceEEEEcCceeEEEeCCCeEEEEEEeCCc----CCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCC
Q 013772          354 LSFTDGKTRTLFELTTEAYLIISNRGNVCLGILNGAE----VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCD  426 (436)
Q Consensus       354 f~f~~g~~~~~~~i~~~~y~~~~~~~~~Cl~~~~~~~----~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~  426 (436)
                      |+|.+   +..+.++|++|++...++.+|++++....    ......||||+.|||++|+|||++++|||||+....
T Consensus       302 ~~f~~---~~~~~i~~~~y~~~~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~~  375 (381)
T d1t6ex_         302 LGLDG---GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHF  375 (381)
T ss_dssp             EEETT---SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCTT
T ss_pred             EEEcC---CcEEEEChhHeEEEeCCCcEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEECCCC
Confidence            99986   59999999999998888899998876432    123457999999999999999999999999997543


No 14 
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-49  Score=382.80  Aligned_cols=311  Identities=17%  Similarity=0.264  Sum_probs=245.1

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCC
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE--APHPLYRPSNDLVPCEDPICASLHAP  140 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~--~~~~~y~p~~S~~~c~s~~c~~~~~~  140 (436)
                      ..+.|++  |.+.+|+++|.||||||++.|+|||||+++||+|. .|..|..  ..++.|+|++|.      +|+.    
T Consensus         5 ~~~~l~n--~~d~~Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv~~~-~C~~~~~~c~~~~~y~~~~Ss------t~~~----   71 (337)
T d1hrna_           5 SSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACVYHKLFDASDSS------SYKH----   71 (337)
T ss_dssp             EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHHSSCCBCGGGCS------SCEE----
T ss_pred             cceEeEE--cCCcEEEEEEEEeCCCEEEEEEEECCCcceEEEcC-CCCCcccccccCCCCChhhCC------ceEE----
Confidence            3455664  35779999999999999999999999999999998 8987653  246789998872      3333    


Q ss_pred             CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC------C
Q 013772          141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK------S  214 (436)
Q Consensus       141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~------~  214 (436)
                              ..|.+.+.|++| ++.|.++.|++.+    ++..+.++.+++.......+.....+||+|||+..      .
T Consensus        72 --------~~~~~~~~~~~g-~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~GilGl~~~~~~~~~~~  138 (337)
T d1hrna_          72 --------NGTELTLRYSTG-TVSGFLSQDIITV----GGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVT  138 (337)
T ss_dssp             --------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEECCHHHHTTCSSCEEEECSCGGGCGGGCC
T ss_pred             --------CCccEEEEecCc-EEEEEEEEeeeee----cCceeeeEEEEEEeccccccccccccccccccccccccCCCC
Confidence                    367899999999 7999999999999    45566677777766532224456789999999864      3


Q ss_pred             cHHHHhhhcccc-ceeeEEEeCC------CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-
Q 013772          215 SIVSQLHSQKLI-RNVVGHCLSG------RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-  284 (436)
Q Consensus       215 s~~~ql~~~g~i-~~~Fs~~l~~------~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-  284 (436)
                      +++.+|.+++.| ++.|++||..      ...|.|+||+.+  +..+++.|+|+..  ..+|.+.+.++.++++..... 
T Consensus       139 ~~~~~l~~~~~i~~~~f~~~l~~~~~~~~~~~g~l~~G~~d~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~  216 (337)
T d1hrna_         139 PIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK--TGVWQIQMKGVSVGSSTLLCED  216 (337)
T ss_dssp             CHHHHHHTTTCBSSSEEEEEECCCCC---CCCEEEEETSCCGGGEEEEEEEEEBSS--TTSCEEEECEEEETTEEEESTT
T ss_pred             cchhhHhhcCCCccceeeEEeccccCCCcccCceEEccccChhhcCCceeeeeeec--cceeEEeecceecccccccccc
Confidence            588999999999 8999999973      346899999765  4468899999975  489999999999999876543 


Q ss_pred             CCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceE
Q 013772          285 NLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTL  364 (436)
Q Consensus       285 ~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~  364 (436)
                      ...++|||||++++||+++|++|++++.....        ......+|+..           ..+|+|+|+|++    .+
T Consensus       217 ~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~~--------~~~~~~~c~~~-----------~~~P~l~f~f~g----~~  273 (337)
T d1hrna_         217 GCLALVDTGASYISGSTSSIEKLMEALGAKKR--------LFDYVVKCNEG-----------PTLPDISFHLGG----KE  273 (337)
T ss_dssp             CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC--------SSCEEEETTTG-----------GGCCCEEEEETT----EE
T ss_pred             CcceEEeCCCcceeccHHHHHHHHHHhCCccc--------ccceeeecccc-----------CCCCceeEEECC----EE
Confidence            46799999999999999999999998864322        12223346543           348999999986    99


Q ss_pred             EEEcCceeEEEeCC--CeEEE-EEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeCC
Q 013772          365 FELTTEAYLIISNR--GNVCL-GILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPAN  424 (436)
Q Consensus       365 ~~i~~~~y~~~~~~--~~~Cl-~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~  424 (436)
                      ++|+|++|+++..+  +..|+ ++..... ....+.||||+.|||++|+|||+|++|||||++|
T Consensus       274 ~~l~p~~yl~~~~~~~~~~C~~~i~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~IGfA~ak  337 (337)
T d1hrna_         274 YTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR  337 (337)
T ss_dssp             EEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEChHHeEEEecCCCCCEEEEEEEcCCcCCCCCCCEEECHHhhCCEEEEEECCCCEEEEEEcC
Confidence            99999999976432  35784 5654432 2245679999999999999999999999999986


No 15 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=100.00  E-value=3.4e-49  Score=378.44  Aligned_cols=304  Identities=16%  Similarity=0.234  Sum_probs=240.1

Q ss_pred             cceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772           61 SSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP  140 (436)
Q Consensus        61 ~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~  140 (436)
                      .....|+.++    ..|+++|.||+  |++.|+|||||+++||+|. .|..|..+.++.|+|++|       +|..    
T Consensus         5 ~~~~~~~~~d----~~Y~~~i~iG~--q~~~l~~DTGSs~~Wv~~~-~C~~~~~~~~~~~~~~sS-------t~~~----   66 (323)
T d1izea_           5 SVTTNPTSND----EEYITQVTVGD--DTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSS-------AQKI----   66 (323)
T ss_dssp             EEEEEECGGG----CCEEEEEEETT--EEEEEEEETTCCCCEECBT-TSCHHHHTTSCCBCCCTT-------CEEE----
T ss_pred             cccccccCCc----cEEEEEEEECC--eeEEEEEECCCcceEEEcC-CCCChhhcCCCccCcccc-------cccc----
Confidence            3445566654    37999999995  7999999999999999999 999888888889998766       2332    


Q ss_pred             CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCCCc----
Q 013772          141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGKSS----  215 (436)
Q Consensus       141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~s----  215 (436)
                              ..|.|.+.|++|+.+.|.+++|++++    ++..+.++.|++....... ......+||||||+...+    
T Consensus        67 --------~~~~~~i~Y~~G~~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~~~~~~  134 (323)
T d1izea_          67 --------DGATWSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQP  134 (323)
T ss_dssp             --------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred             --------CCCEEEEEcCCcceeeeEEEeeeeec----cCccccceEEEEEEeccCccccccccccccccccccccccCc
Confidence                    46789999999989999999999999    5677889999999875211 345668999999986432    


Q ss_pred             -----HHHHhhhcccc-ceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCC
Q 013772          216 -----IVSQLHSQKLI-RNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLP  287 (436)
Q Consensus       216 -----~~~ql~~~g~i-~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~  287 (436)
                           +..++.  +.+ +++|++|+.+...|.|+||+.+  ++.+++.|+|+.. ...+|.+.+.+|.++++.... ...
T Consensus       135 ~~~~~~~~~~~--~~~~~~~fs~~l~~~~~g~l~~Gg~d~~~~~g~~~~~~~~~-~~~~~~v~~~~i~v~~~~~~~-~~~  210 (323)
T d1izea_         135 TPQKTFFDNVK--SSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDN-SQGFWGFTADGYSIGSDSSSD-SIT  210 (323)
T ss_dssp             SCCCCHHHHHG--GGSSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBC-TTSSCEEEESEEEETTEEECC-CEE
T ss_pred             ccchHHHHhhh--hhcCcceEEEEccCCCCeeEEccccCcccccCcceeeeecC-CCceEEEEeceEEECCCcccc-Cce
Confidence                 444443  335 8899999998888999999875  4468899999973 457899999999999988765 478


Q ss_pred             EEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEE
Q 013772          288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFEL  367 (436)
Q Consensus       288 ~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i  367 (436)
                      ++|||||+++++|+++++++.+++.+....     . .. ....|...           ..+|.++|+|++    .++.|
T Consensus       211 ~ivDSGts~~~lp~~~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~-----------~~~p~i~f~f~g----~~~~i  268 (323)
T d1izea_         211 GIADTGTTLLLLDDSIVDAYYEQVNGASYD-----S-SQ-GGYVFPSS-----------ASLPDFSVTIGD----YTATV  268 (323)
T ss_dssp             EEECTTCCSEEECHHHHHHHHTTSTTCEEE-----T-TT-TEEEEETT-----------CCCCCEEEEETT----EEEEE
T ss_pred             EEeccCCccccCCHHHHHHHHHHcCCcccc-----C-CC-CcEEeecc-----------cCCceEEEEECC----EEEEc
Confidence            999999999999999999988877543211     1 11 11123321           247999999986    99999


Q ss_pred             cCceeEEEeCCCeEE-EEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          368 TTEAYLIISNRGNVC-LGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       368 ~~~~y~~~~~~~~~C-l~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      |+++|++...++..| +++....   ..+.+|||++|||++|+|||+|++|||||++
T Consensus       269 p~~~~~~~~~~~~~C~~~i~~~~---~~~~~iLG~~flr~~y~vfD~~~~~IGfA~~  322 (323)
T d1izea_         269 PGEYISFADVGNGQTFGGIQSNS---GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ  322 (323)
T ss_dssp             CHHHHEEEECSTTEEEESEEECT---TTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             ChHHEEEEeCCCCEEEEEEECCC---CCCCEEECHHHhCCEEEEEECCCCEEEEccC
Confidence            999999876656667 5666544   3467999999999999999999999999986


No 16 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=100.00  E-value=5.2e-48  Score=372.86  Aligned_cols=303  Identities=21%  Similarity=0.267  Sum_probs=232.6

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQH  143 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~~  143 (436)
                      .+|+++..   .+|+++|.||||||++.|+|||||+++||+|. +|..|..                  ++..       
T Consensus         4 ~~p~~~~~---~~Y~~~i~iGtP~Q~~~~i~DTGSs~~wv~~~-~c~~~ss------------------t~~~-------   54 (340)
T d1wkra_           4 SVPATNQL---VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-KSYVKTS------------------TSSA-------   54 (340)
T ss_dssp             EEEEEECS---SCEEEEEEETTTTEEEEEEEETTCCCCEECSS-SCCCCCT------------------TCEE-------
T ss_pred             eEceecCC---eEEEEEEEEcCCCeEEEEEEECCCcceEEcCC-CCCCCCC------------------CcCC-------
Confidence            57888653   36999999999999999999999999999987 6643310                  0011       


Q ss_pred             CCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCCCCCCCCceeeeecCCC----------
Q 013772          144 KCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPGASYHPLDGILGLGKGK----------  213 (436)
Q Consensus       144 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~GIlGLg~~~----------  213 (436)
                           ..+.|.+.|++| ++.|.+++|++++    ++.++.++.|||++.. .+  ....+||+|+|+..          
T Consensus        55 -----~~~~~~i~Y~~g-s~~G~~~~D~~~~----~~~~~~~~~fg~~~~~-~~--~~~~~gi~g~g~~~~~~~~~~~~~  121 (340)
T d1wkra_          55 -----TSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRD-SG--FDGVDGILGVGPVDLTVGTLSPHT  121 (340)
T ss_dssp             -----EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-ES--CTTCSEEEECSCGGGGTTSEESCT
T ss_pred             -----CCCeEEEEeCCe-EEEEEEEEEEEee----CCeeeccEEEEEEEec-cC--cccccceecccccccccccccCcc
Confidence                 245899999999 8999999999999    5678899999999886 33  24579999999763          


Q ss_pred             ----CcHHHHhhhcccc-ceeeEEEeCC-----CCCceEEeCCCC--CCCCCcEEEEcccCCC--CceeeEeeEEEECCE
Q 013772          214 ----SSIVSQLHSQKLI-RNVVGHCLSG-----RGGGFLFFGDDL--YDSSRVVWTSMSSDYT--KYYSPGVAELFFGGK  279 (436)
Q Consensus       214 ----~s~~~ql~~~g~i-~~~Fs~~l~~-----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~--~~~~v~l~~i~v~g~  279 (436)
                          .+++.+|.+++.+ +++|++||..     ...|.|+||+.+  ++.+++.|+|++....  .||.|.++.+.++++
T Consensus       122 ~~~~~~~~~~l~~q~~i~~~~fs~~l~~~~~~~~~~g~l~~Gg~d~~~~~g~i~~~pv~~~~~~~~y~~i~~~~~~~~~~  201 (340)
T d1wkra_         122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSST  201 (340)
T ss_dssp             TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEETTTE
T ss_pred             ccCcCchhhhHHhhhccchhheeeeecccCCCCCCCceEEccccChhhcccceEEEEeecCCCCcceeEEEEEEEECCce
Confidence                2589999999999 8999999973     235889999875  4679999999986543  689999876666666


Q ss_pred             EeccCCCCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCC
Q 013772          280 TTGLKNLPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDG  359 (436)
Q Consensus       280 ~i~~~~~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g  359 (436)
                      .+.. +..+||||||++++||+++|++|.+++.....     .. ......+|...           ..+|+|+|+|++ 
T Consensus       202 ~~~~-~~~aiiDSGtt~~~lP~~~~~~l~~~~~~~~~-----~~-~~~~~~~c~~~-----------~~~P~i~f~f~g-  262 (340)
T d1wkra_         202 SILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVAD-----NN-TGLLRLTTAQY-----------ANLQSLFFTIGG-  262 (340)
T ss_dssp             EEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC-----TT-TSSEEECHHHH-----------HTCCCEEEEETT-
T ss_pred             Eecc-CcceEEecCCccEeccHHHHHHHHHHhCcccc-----CC-ceEEEEecccc-----------CCCCceEEEECC-
Confidence            5543 46799999999999999999999988864322     11 12223346532           247999999986 


Q ss_pred             CcceEEEEcCceeEEEeCC-------C--eEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCCCCcc
Q 013772          360 KTRTLFELTTEAYLIISNR-------G--NVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCDRIPK  430 (436)
Q Consensus       360 ~~~~~~~i~~~~y~~~~~~-------~--~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~~~~~  430 (436)
                         ..++|++++|+.+...       .  ..|..............||||++|||++|+|||+|++|||||++++++..+
T Consensus       263 ---~~~~i~~~~yi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~~iGfA~~~~~~~~~  339 (340)
T d1wkra_         263 ---QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTATS  339 (340)
T ss_dssp             ---EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCCC
T ss_pred             ---EEEEEChHHeEeeccCceeecCccceEEEEEecccCCCCCCCCEEechHHhCCEEEEEECCCCEEEEEECCCCCCCC
Confidence               9999999999875321       1  122222222222334579999999999999999999999999999988754


No 17 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=100.00  E-value=2.6e-48  Score=372.21  Aligned_cols=302  Identities=18%  Similarity=0.280  Sum_probs=238.8

Q ss_pred             ceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCC
Q 013772           62 SLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPG  141 (436)
Q Consensus        62 ~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~  141 (436)
                      ...+|+.++.    +|+++|.||+|  +++|+|||||+++||+|. .|..|..+.++.|+|++|.      ++.      
T Consensus         6 ~~~~~~~~d~----~Y~~~i~vG~~--~~~v~~DTGSs~~Wv~~~-~C~~c~~~~~~~y~~s~Ss------t~~------   66 (323)
T d1bxoa_           6 ATNTPTANDE----EYITPVTIGGT--TLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG------KEL------   66 (323)
T ss_dssp             EEEEECGGGS----CEEEEEEETTE--EEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC------EEE------
T ss_pred             cccccccCCc----EEEEEEEECCc--cEEEEEECCCcceEEECC-CCCchhhcCCCCCCCcccc------ccc------
Confidence            3456776553    89999999985  678999999999999999 9999888888899997762      222      


Q ss_pred             CCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCCCc----
Q 013772          142 QHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGKSS----  215 (436)
Q Consensus       142 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~~s----  215 (436)
                             +.|.|.+.|++|+.+.|.+++|++++    ++..+.++.|++.... ..  ......+||||||+...+    
T Consensus        67 -------~~~~~~~~Y~~G~~~~G~~~~D~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~GilGlg~~~~s~~~~  134 (323)
T d1bxoa_          67 -------SGYTWSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQI-SAQFQQDTNNDGLLGLAFSSINTVQP  134 (323)
T ss_dssp             -------EEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE-CHHHHTCTTCSEEEECSCGGGCCCBS
T ss_pred             -------CCCEEEEEeCCCCcEEEEEEEEeeec----cCcccccceeeeeeee-ecccccccccccccccccCcccccCC
Confidence                   35789999999988999999999999    5667889999998875 32  234568999999986432    


Q ss_pred             -----HHHHhhhccccceeeEEEeCCCCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCE
Q 013772          216 -----IVSQLHSQKLIRNVVGHCLSGRGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPV  288 (436)
Q Consensus       216 -----~~~ql~~~g~i~~~Fs~~l~~~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~  288 (436)
                           +...+. ..+.++.|++++.....|.|+||+.+  +..+++.|+|+.. ...+|.+.+++|.++++...  ...+
T Consensus       135 ~~~~~~~~~~~-~~~~~~~fs~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~~~~~~--~~~a  210 (323)
T d1bxoa_         135 QSQTTFFDTVK-SSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDN-SQGFWSFNVDSYTAGSQSGD--GFSG  210 (323)
T ss_dssp             SCCCCHHHHHG-GGBSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBC-TTSSCEEEEEEEEETTEEEE--EEEE
T ss_pred             CcCchHHHHHh-hhcccceeeeccccCCCceeeeeccccccccCceeeeeccC-cccceeEeeeeEEECCEecC--Ccce
Confidence                 333333 33448899999988888999999865  5678999999974 45789999999999998754  3689


Q ss_pred             EEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEc
Q 013772          289 VFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELT  368 (436)
Q Consensus       289 iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~  368 (436)
                      +|||||++++||.+++++|.+++......     ........+|..             .+|+|+|+|+|    .++.|+
T Consensus       211 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~~~~c~~-------------~~p~itf~f~g----~~~~i~  268 (323)
T d1bxoa_         211 IADTGTTLLLLDDSVVSQYYSQVSGAQQD-----SNAGGYVFDCST-------------NLPDFSVSISG----YTATVP  268 (323)
T ss_dssp             EECTTCSSEEECHHHHHHHHTTSTTCEEE-----TTTTEEEECTTC-------------CCCCEEEEETT----EEEEEC
T ss_pred             EEecccccccCCHHHHHHHHHHhCCcccc-----CCCCcEEEeccC-------------CCCcEEEEECC----EEEEEC
Confidence            99999999999999999998877543321     111222334642             37999999986    999999


Q ss_pred             CceeEEEe-CCCeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          369 TEAYLIIS-NRGNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       369 ~~~y~~~~-~~~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      +++|++.. .++.+|+ ++....   ..+.+|||++|||++|+|||+|++|||||++
T Consensus       269 ~~~~~~~~~~~~~~C~~~i~~~~---~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~  322 (323)
T d1bxoa_         269 GSLINYGPSGDGSTCLGGIQSNS---GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ  322 (323)
T ss_dssp             HHHHEEEECSSSSCEEESEEECT---TCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred             hHHeEEEEcCCCCEEEEEEECCC---CCCcEEECHHHhCCEEEEEECCCCEEeEEeC
Confidence            99998754 4556786 555544   2456899999999999999999999999986


No 18 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=7.7e-48  Score=368.52  Aligned_cols=308  Identities=17%  Similarity=0.335  Sum_probs=247.1

Q ss_pred             cceEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCC
Q 013772           61 SSLLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAP  140 (436)
Q Consensus        61 ~~~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~  140 (436)
                      +.+.+||++  +.+.+|+++|.||||+|++.|++||||+++||+|. +|..|..+.++.|+|++|.      +|+.    
T Consensus         2 ~~~svPl~~--~~d~~Y~~~i~vGtP~q~~~~~~DTGSs~~Wv~~~-~C~~~~~~~~~~y~~~~Ss------t~~~----   68 (323)
T d3cmsa_           2 EVASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACKNHQRFDPRKSS------TFQN----   68 (323)
T ss_dssp             CCEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCEE----
T ss_pred             CceEEeeEe--ccCCEEEEEEEECCCCEEEEEEEECCCCceEEecC-CCCCcccCCCCCCCccccC------cccc----
Confidence            346789874  46779999999999999999999999999999999 9999988888999998872      3333    


Q ss_pred             CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC-----
Q 013772          141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK-----  213 (436)
Q Consensus       141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~-----  213 (436)
                              ..|.+.+.|++| +++|.+++|.+++    ++.......|++.... ..  .......+++|+++..     
T Consensus        69 --------~~~~~~~~y~~g-s~~G~~~~d~v~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~  134 (323)
T d3cmsa_          69 --------LGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQE-PGDFFTYAEFDGILGMAYPSLASEY  134 (323)
T ss_dssp             --------EEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred             --------CCCcEEEEcCCc-eEEEEEEEEEEEE----eccccccceEEEEEee-cccccccccccccccccccccccCC
Confidence                    357899999999 7899999999999    4556677778777765 33  2334567788887653     


Q ss_pred             -CcHHHHhhhcccc-ceeeEEEeCC-CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC-CCC
Q 013772          214 -SSIVSQLHSQKLI-RNVVGHCLSG-RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK-NLP  287 (436)
Q Consensus       214 -~s~~~ql~~~g~i-~~~Fs~~l~~-~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~-~~~  287 (436)
                       .+++.+|.+++.| +++||+||.. ...|.+.+|+.+  +..+++.|+|+..  ..+|.+.+.++.+++...... ...
T Consensus       135 ~~~~~~~l~~~~~i~~~~fs~~l~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  212 (323)
T d3cmsa_         135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTV--QQYWQFTVDSVTISGVVVACEGGCQ  212 (323)
T ss_dssp             CCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTEEEESTTCEE
T ss_pred             CcchhhhHhhcCCCcccceeEEeccCCCCCceeccccCcccccCceEEeeccc--cceeEEEEeeEeeCCeeeecCCCee
Confidence             4689999999999 8999999984 446889999765  4457889999864  478999999999988876554 468


Q ss_pred             EEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEE
Q 013772          288 VVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFEL  367 (436)
Q Consensus       288 ~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i  367 (436)
                      ++|||||++++||+++++++.+++.+....       .......|...           ..+|+|+|+|++    +.++|
T Consensus       213 ~iiDSGtt~~~lp~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~-----------~~~p~i~f~f~g----~~~~l  270 (323)
T d3cmsa_         213 AILDTGTSKLVGPSSDILNIQQAIGATQNQ-------YGEFDIDCDNL-----------SYMPTVVFEING----KMYPL  270 (323)
T ss_dssp             EEECTTCCSEEECHHHHHHHHHHHTCEEET-------TTEEEECTTCT-----------TTSCCEEEEETT----EEEEE
T ss_pred             EEEecCcceEEecHHHHHHHHHHhCceecc-------CCceeEecccc-----------CCCCeEEEEECC----EEEEE
Confidence            999999999999999999999988664431       11111224322           348999999986    99999


Q ss_pred             cCceeEEEeCCCeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          368 TTEAYLIISNRGNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       368 ~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      ++++|+.+ .++.+|++|....   ..+.+|||+.|||++|++||+|++|||||++
T Consensus       271 ~~~~y~~~-~~~~c~~~i~~~~---~~~~~iLG~~~l~~~yvvfD~~~~~igfa~a  322 (323)
T d3cmsa_         271 TPSAYTSQ-DQGFCTSGFQSEN---HSQKWILGDVFIREYYSVFDRANNLVGLAKA  322 (323)
T ss_dssp             CHHHHEEE-ETTEEEESEEEC------CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             CHHHeEEc-CCCEEEEEEEeCC---CCCCEEEcHHhhCcEEEEEECCCCEEEEEEe
Confidence            99999876 4556678888765   3467899999999999999999999999996


No 19 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=100.00  E-value=4.1e-48  Score=371.54  Aligned_cols=309  Identities=18%  Similarity=0.230  Sum_probs=244.5

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVEAPHPLYRPSNDLVPCEDPICASLHAPGQ  142 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~~~~~~y~p~~S~~~c~s~~c~~~~~~~~  142 (436)
                      ..++|.+  +.+..|+++|+||||+|++.|++||||+++||+|. +|..|..+.++.|+|++|.      +|+.      
T Consensus         4 ~~~~l~~--~~~~~Y~~~v~iGtP~q~~~~~~DTGS~~~Wv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~------   68 (329)
T d2bjua1           4 DNIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCLTKHLYDSSKSR------TYEK------   68 (329)
T ss_dssp             EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGGGSCCBCGGGCT------TCEE------
T ss_pred             CcEEeEE--ecCCEEEEEEEECCCCEEEEEEEECCCcceEEECC-CCCCccccCCCCCCcccCC------CccC------
Confidence            3456653  46779999999999999999999999999999999 9999988888999998873      3443      


Q ss_pred             CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC------C
Q 013772          143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK------S  214 (436)
Q Consensus       143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~------~  214 (436)
                            ..|.+.+.|++| .+.|.++.|++++    ++..+.++.++++......  ......+|++|+++..      .
T Consensus        69 ------~~~~~~~~Y~~g-~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~  137 (329)
T d2bjua1          69 ------DGTKVEMNYVSG-TVSGFFSKDLVTV----GNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVD  137 (329)
T ss_dssp             ------EEEEEEEECSSS-EEEEEEEEEEEEE----TTEEEEEEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCC
T ss_pred             ------CCccEEEEcCCC-cEEEEEEEeeeee----eeeeeccceEEEEEeeccCccccccccCccccccccccccCCcc
Confidence                  367899999999 7999999999999    5566777777777664221  3346689999998753      3


Q ss_pred             cHHHHhhhcccc-ceeeEEEeCC--CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEE
Q 013772          215 SIVSQLHSQKLI-RNVVGHCLSG--RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVV  289 (436)
Q Consensus       215 s~~~ql~~~g~i-~~~Fs~~l~~--~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~i  289 (436)
                      .+...+..++.+ ++.|++|+..  ...|.++||+.+  +..+++.|+|+..  ..+|.+.++.+.++...   .+..++
T Consensus       138 ~~~~~~~~~~~i~~~~fs~~l~~~~~~~g~l~~gg~d~~~~~g~~~~~~~~~--~~~~~v~~~~~~~~~~~---~~~~~~  212 (329)
T d2bjua1         138 PIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH--DLYWQITLDAHVGNIML---EKANCI  212 (329)
T ss_dssp             CHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE--ETTEEEEEEEEETTEEE---EEEEEE
T ss_pred             ccchhhhhhhccccceeeEEecCCcCCcceeeecCCCcccccCceEEEeeee--eeeEEEEEeeeEeeeEc---cCCccc
Confidence            588889999999 8999999974  457999999865  4468899999964  48899999887654332   235899


Q ss_pred             EeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcC
Q 013772          290 FDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTT  369 (436)
Q Consensus       290 iDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~  369 (436)
                      |||||++++||.+++++|++++.+....     . ...... |...           ..+|.++|+|++    .+++|+|
T Consensus       213 iDSGt~~~~lp~~~~~~l~~~~~~~~~~-----~-~~~~~~-~~~~-----------~~~p~~~f~~~g----~~~~i~p  270 (329)
T d2bjua1         213 VDSGTSAITVPTDFLNKMLQNLDVIKVP-----F-LPFYVT-LCNN-----------SKLPTFEFTSEN----GKYTLEP  270 (329)
T ss_dssp             ECTTCCSEEECHHHHHHHTTTSSCEECT-----T-SSCEEE-ETTC-----------TTCCCEEEECSS----CEEEECH
T ss_pred             ccccccceeCCHHHHHHHHHHhCCeecC-----C-CCeeEe-eccc-----------CCCCceeEEeCC----EEEEECH
Confidence            9999999999999999998887543321     1 122222 3322           247999999996    8999999


Q ss_pred             ceeEEEeCC---CeEEEEEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeCCCC
Q 013772          370 EAYLIISNR---GNVCLGILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPANCD  426 (436)
Q Consensus       370 ~~y~~~~~~---~~~Cl~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~~c~  426 (436)
                      ++|+.+..+   +.+|++|.....  ..+.+|||++|||++|+|||+|++|||||+++++
T Consensus       271 ~~y~~~~~~~~~~~C~~~i~~~~~--~~~~~IlG~~fl~~~y~vfD~~~~~iGfA~a~~n  328 (329)
T d2bjua1         271 EYYLQHIEDVGPGLCMLNIIGLDF--PVPTFILGDPFMRKYFTVFDYDNHSVGIALAKKN  328 (329)
T ss_dssp             HHHEEECTTTSTTEEEECEEECCC--SSCEEEECHHHHHHEEEEEETTTTEEEEEEECSC
T ss_pred             HHhEEEeecCCCCEEEEEEEECCC--CCCCEEEchHhhCcEEEEEECCCCEEEEEEeccC
Confidence            999987643   244588886542  2467999999999999999999999999999875


No 20 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=100.00  E-value=7.9e-47  Score=362.06  Aligned_cols=306  Identities=20%  Similarity=0.334  Sum_probs=244.6

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC-CCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE-APHPLYRPSNDLVPCEDPICASLHAPGQ  142 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~-~~~~~y~p~~S~~~c~s~~c~~~~~~~~  142 (436)
                      .++|+++  .+..|+++|.||||||++.|++||||+++||+|. .|..|.. +.++.|+|++|.      +|..      
T Consensus         4 ~~~~~~~--~d~~Y~~~i~IGtP~Q~~~l~~DTGS~~~Wv~~~-~C~~~~~c~~~~~yn~~~S~------t~~~------   68 (326)
T g1b5f.1           4 VVALTND--RDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACRAHSMYESSDSS------TYKE------   68 (326)
T ss_dssp             EEEEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHHTSCCBCGGGCT------TCEE------
T ss_pred             eeeeeec--cCCEEEEEEEECCCCeEEEEEEECCCcceEEecC-CCCCCccccCCCcCCCccCc------cccc------
Confidence            4566643  5679999999999999999999999999999999 8987643 456789998772      2222      


Q ss_pred             CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCCC--cHHHH
Q 013772          143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGKS--SIVSQ  219 (436)
Q Consensus       143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~~--s~~~q  219 (436)
                            ..|.+...|++| .+.|.+++|++++    ++..+..+.++++...... ......+|++|||+...  ++..+
T Consensus        69 ------~~~~~~~~y~~g-~~~G~~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~Gl~~~~~~~~~~~~  137 (326)
T g1b5f.1          69 ------NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYN  137 (326)
T ss_dssp             ------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHH
T ss_pred             ------CCcceEEEecCc-ceEEEEEeeccEe----ecceeccceeEEEEeeeccccccccccccccccccccccChhHh
Confidence                  356899999999 7889999999999    4556677788877664122 34567899999998865  58889


Q ss_pred             hhhcccc-ceeeEEEeCC----CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC--CCCEEE
Q 013772          220 LHSQKLI-RNVVGHCLSG----RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK--NLPVVF  290 (436)
Q Consensus       220 l~~~g~i-~~~Fs~~l~~----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~--~~~~ii  290 (436)
                      |..++.| ++.|++|+..    ...|.|+||+.+  ++.++++|+|+...  .+|.+.+.++.+++..+...  ...+++
T Consensus       138 l~~~~~i~~~~~s~~~~~~~~~~~~~~l~~G~~d~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~  215 (326)
T g1b5f.1         138 MLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQAFA  215 (326)
T ss_dssp             HHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE--TTEEEEECCEEETTEECCTTTTCEEEEE
T ss_pred             hhhccccCCceeeEEEecCCCCCCCeEEEcCCCCchhccceeEEEeecCC--CceEEEeccEEeccceeeecCCCceEEe
Confidence            9999999 8999999973    457799999865  45688999998653  78999999999999887653  468999


Q ss_pred             eccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEEEEcCc
Q 013772          291 DSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLFELTTE  370 (436)
Q Consensus       291 DSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~~i~~~  370 (436)
                      |||+++++||+++++++.+++.+..           ....+|+..           +.+|.|+|+|++    .++.|+++
T Consensus       216 dsgt~~~~lp~~~~~~~~~~~~~~~-----------~~~~~C~~~-----------~~~p~itf~f~g----~~~~i~~~  269 (326)
T g1b5f.1         216 DSGTSLLSGPTAIVTQINHAIGANE-----------ELQVDCNTL-----------SSMPNVSFTIGG----KKFGLTPE  269 (326)
T ss_dssp             CTTCSSEEECHHHHHHHHHHTTCCC-----------CCEECGGGG-----------GGCCCEEEEETT----EEEEECHH
T ss_pred             eCCCceEEcChHHHHHHHHhhCCce-----------eEEccccCC-----------CCCCcEEEEECC----EEEEECHH
Confidence            9999999999999999988874321           122348653           247999999986    99999999


Q ss_pred             eeEEEeCC--CeEEE-EEEeCCcCCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          371 AYLIISNR--GNVCL-GILNGAEVGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       371 ~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      +|+++..+  ...|+ +|.........+.+|||++|||++|+|||+|++||||||+
T Consensus       270 ~y~~~~~~~~~~~C~~~i~~~~~~~~~~~~ilG~~fl~~~yvvfD~~~~~igfA~a  325 (326)
T g1b5f.1         270 QYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA  325 (326)
T ss_dssp             HHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             HeEEEecCCCCCEEEEEEEeCCCCCCCCcEEECHHHhCCEEEEEECCCCEEEEEEC
Confidence            99987644  35885 6666543334467899999999999999999999999996


No 21 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-46  Score=360.39  Aligned_cols=314  Identities=19%  Similarity=0.326  Sum_probs=244.6

Q ss_pred             eEEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCC
Q 013772           63 LLFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE--APHPLYRPSNDLVPCEDPICASLHAP  140 (436)
Q Consensus        63 ~~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~--~~~~~y~p~~S~~~c~s~~c~~~~~~  140 (436)
                      +..||++  |.+..|+++|.||||||++.|+|||||+++||+|. +|..|..  +.++.|||++|.      +|+.    
T Consensus         3 ~~~~l~~--~~d~~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~-~C~~~~~~~~~~~~yn~~~Ss------T~~~----   69 (338)
T g1lya.1           3 IPEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACWIHHKYNSDKSS------TYVK----   69 (338)
T ss_dssp             EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHHTSCCBCGGGCT------TCEE----
T ss_pred             CCcccee--cCCcEEEEEEEEcCCCeEEEEEEECCCcceEEecC-CCCCcccccccCCCCCcccCc------cccC----
Confidence            4456764  56789999999999999999999999999999999 8987754  467789998872      3332    


Q ss_pred             CCCCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC-CCCCCCceeeeecCCC------
Q 013772          141 GQHKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG-ASYHPLDGILGLGKGK------  213 (436)
Q Consensus       141 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~-~~~~~~~GIlGLg~~~------  213 (436)
                              ..|.+.+.|++| ++.|.+++|+|+++... ...+..+.|++....... ......+||||||++.      
T Consensus        70 --------~~~~~~~~y~~g-s~~G~~~~D~v~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~~~~~~  139 (338)
T g1lya.1          70 --------NGTSFDIHYGSG-SLSGYLSQDTVSVPCQG-GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNV  139 (338)
T ss_dssp             --------EEEEEEEECSSC-EEEEEEEEEEEEESCCC-CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGC
T ss_pred             --------CCcceEEeccce-EEEEEEEEEEEEECCcC-ceeeeeeEEEEecccccccccccccccccccCCCccccCCc
Confidence                    367899999999 88999999999996422 234567788887765222 3455689999999864      


Q ss_pred             CcHHHHhhhcccc-ceeeEEEeCC----CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEecc-CC
Q 013772          214 SSIVSQLHSQKLI-RNVVGHCLSG----RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGL-KN  285 (436)
Q Consensus       214 ~s~~~ql~~~g~i-~~~Fs~~l~~----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~-~~  285 (436)
                      .++..++..+++| ++.|++++..    ...|.++||+.+  ++.+++.|.|+..  ..+|.|.+.++.+++..... ..
T Consensus       140 ~~~~~~l~~~~~i~~~~~s~~~~~~~~~~~~g~l~~G~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~  217 (338)
T g1lya.1         140 LPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTR--KAYWQVHLDQVEVASGLTLCKEG  217 (338)
T ss_dssp             CCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCCGGGEEEEEEEEECSS--BTTBEEEEEEEEETTSCEESTTC
T ss_pred             CcHhHhhHhhcccccccceeEeccCCCCCCCceEEcCCcCcccccccceeccccc--cceeEEeeeeEEECCceeecCCC
Confidence            3589999999999 8999999973    456889999865  4567888998864  37899999999998876543 34


Q ss_pred             CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772          286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF  365 (436)
Q Consensus       286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~  365 (436)
                      ..+++||||++++||.+++++|.+++.+.....      ....+. |..           ...+|.|+|+|++    .++
T Consensus       218 ~~~~iDsgt~~~~lp~~~~~~l~~~l~~~~~~~------~~~~~~-~~~-----------~~~~p~i~f~f~g----~~~  275 (338)
T g1lya.1         218 CEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQ------GEYMIP-CEK-----------VSTLPAITLKLGG----KGY  275 (338)
T ss_dssp             EEEEECTTCSSEEECHHHHHHHHHHHTCEEEET------TEEEEE-GGG-----------GGGSCCEEEEETT----EEE
T ss_pred             eeEEeecCcceecCCHHHHHHHHHHHhheeccC------Cceeee-ccc-----------cCCCceEEEEECC----EEE
Confidence            679999999999999999999999986543310      111222 322           2348999999975    999


Q ss_pred             EEcCceeEEEeCC--CeEEEE-EEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          366 ELTTEAYLIISNR--GNVCLG-ILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       366 ~i~~~~y~~~~~~--~~~Cl~-~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      +|++++|++...+  +..|+. +..... ....+.+|||++|||++|+|||++++||||||+
T Consensus       276 ~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~igfa~a  337 (338)
T g1lya.1         276 KLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA  337 (338)
T ss_dssp             EECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             EEChHHeEEEEccCCCcEEEEEEEecccCCCCCCcEEEhHHhhccEEEEEECCCCEEEEEEC
Confidence            9999999987543  368964 544321 123456899999999999999999999999997


No 22 
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=100.00  E-value=3.8e-46  Score=358.54  Aligned_cols=309  Identities=21%  Similarity=0.352  Sum_probs=244.1

Q ss_pred             EEEEeecccCCeeEEEEEEeCCCCceEEEEEecCCCceEEecCCCCCCCCC-CCCCCCCCCCCCCCCCCcccccCCCCCC
Q 013772           64 LFRVQGNVYPTGYYNVTVYVGQPPKPYFLDLDTGSDLIWLQCDAPCVQCVE-APHPLYRPSNDLVPCEDPICASLHAPGQ  142 (436)
Q Consensus        64 ~~~l~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~~c~~C~~-~~~~~y~p~~S~~~c~s~~c~~~~~~~~  142 (436)
                      .+||+  .|.+.+|+++|.||||||++.|++||||+++||+|. .|..|.. +.++.|||++|.      +|+.      
T Consensus         6 ~~~l~--~y~d~~Y~~~v~iGtP~q~~~l~~DTGS~~~Wv~~~-~C~~~~~~~~~~~y~p~~Ss------T~~~------   70 (337)
T d1qdma2           6 IVALK--NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACYLHSRYKAGASS------TYKK------   70 (337)
T ss_dssp             SGGGC--CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGGGSCCBCGGGCT------TCBC------
T ss_pred             eEeee--eecCCEEEEEEEEcCCCEEEEEEEECCCcceEEecC-CCCCCccccCCCCCCcccCC------cccc------
Confidence            45555  356778999999999999999999999999999998 8987654 446789998872      3332      


Q ss_pred             CCCCCCCCCeeeeeeCCCceEEEEEEEEEEEeecCCCCcCCCceEEeeeeecCCC--CCCCCCceeeeecCCC------C
Q 013772          143 HKCEDPTQCDYEVEYADGGSSLGVLVKDAFAFNYTNGQRLNPRLALGCGYDQVPG--ASYHPLDGILGLGKGK------S  214 (436)
Q Consensus       143 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~--~~~~~~~GIlGLg~~~------~  214 (436)
                            ..|.+.+.|++| ++.|.+++|++++    +.....++.|++.... .+  ......+|++||+++.      .
T Consensus        71 ------~~~~~~~~y~~g-s~~G~~~~d~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~l~~~~~~~~~~~  138 (337)
T d1qdma2          71 ------NGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKE-PGITFLVAKFDGILGLGFKEISVGKAV  138 (337)
T ss_dssp             ------CCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEC-CBSHHHHCSSSEEEECSCGGGCGGGCC
T ss_pred             ------CCceEEEecCCc-eEEEEEEeeeEEE----Eeeccccceeeeeccc-cceeecccccccccccccCccccCCCc
Confidence                  468999999999 8999999999999    5667788888888775 33  2345679999999874      3


Q ss_pred             cHHHHhhhcccc-ceeeEEEeCC----CCCceEEeCCCC--CCCCCcEEEEcccCCCCceeeEeeEEEECCEEeccC--C
Q 013772          215 SIVSQLHSQKLI-RNVVGHCLSG----RGGGFLFFGDDL--YDSSRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLK--N  285 (436)
Q Consensus       215 s~~~ql~~~g~i-~~~Fs~~l~~----~~~G~l~fG~~~--~~~~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~--~  285 (436)
                      .+..++..++.+ +++|++++..    ...|.+.||+.+  ++.+.+.|+|+...  .+|.+.+.++.+++..+...  +
T Consensus       139 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~g~l~~g~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~  216 (337)
T d1qdma2         139 PVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK--GYWQFDMGDVLVGGKSTGFCAGG  216 (337)
T ss_dssp             CHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE--TTEEEEECCEEETTEECSTTTTC
T ss_pred             cchhhhhhhhccCCCeEEEEeecCCCcccCcceecCCcCccccccceeeeeeccc--cceeeccceEEECCeEeeecCCC
Confidence            477888888888 8999999973    457999999865  34578888888754  78999999999999887653  4


Q ss_pred             CCEEEeccccccccCHHHHHHHHHHHHHhhccCCCccCCCCCCCCccccCCCCCCcccccccccceEEEEEeCCCcceEE
Q 013772          286 LPVVFDSGSSYTYLSHVAYQTLTSMMKRELSAKSLKEAPEDRTLPLCWKGKRPFKNVRDVKKYFKSLALSFTDGKTRTLF  365 (436)
Q Consensus       286 ~~~iiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~P~i~f~f~~g~~~~~~  365 (436)
                      ..++|||||++++||.++++++.+++.+....       .......|...           ..+|.|+|+|+|    +++
T Consensus       217 ~~~iiDtgt~~~~l~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~-----------~~~p~itf~f~g----~~~  274 (337)
T d1qdma2         217 CAAIADSGTSLLAGPTAIITEINEKIGAAGSP-------MGESAVDCGSL-----------GSMPDIEFTIGG----KKF  274 (337)
T ss_dssp             EEEEECSSCCSEEECHHHHHHHHHHHTCCCCS-------SSCCEECGGGG-----------TTCCCEEEEETT----EEE
T ss_pred             ceEEeeccCcceecchHHHHHHHHHhcccccc-------CCccccccccc-----------CCCCceEEEECC----EEE
Confidence            68999999999999999999999999664331       11122235442           347999999985    999


Q ss_pred             EEcCceeEEEeCCC--eEEE-EEEeCCc-CCCCCceeeChhhhcceEEEEECCCCEEEEEeC
Q 013772          366 ELTTEAYLIISNRG--NVCL-GILNGAE-VGLQDLNVIGDISMQDRVVIYDNEKQRIGWMPA  423 (436)
Q Consensus       366 ~i~~~~y~~~~~~~--~~Cl-~~~~~~~-~~~~~~~iLG~~fl~~~yvvfD~~~~riGfa~~  423 (436)
                      .|+|++|++...++  ..|+ +|..... ....+.+|||++|||++|+|||++++||||||+
T Consensus       275 ~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~IlG~~fl~~~y~vfD~~~~~igfA~a  336 (337)
T d1qdma2         275 ALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA  336 (337)
T ss_dssp             EECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             EEChHHeEEEeccCCCCEEEEEEEecCcCCCCCCcEEEhHHhhcCEEEEEECCCCEEEEEEC
Confidence            99999999876443  4675 5655321 223467999999999999999999999999996


No 23 
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=79.28  E-value=0.98  Score=31.68  Aligned_cols=27  Identities=30%  Similarity=0.186  Sum_probs=23.7

Q ss_pred             EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .+.+.||  .|...+++|||.+++-+...
T Consensus        10 ~vtvkIg--Gq~~eaLLDTGADdTVleei   36 (99)
T d2nmza1          10 LVTIKIG--GQLKEALLDTGADDTVIEEM   36 (99)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEESC
T ss_pred             eEEEEEC--CEEEEEeeccCCCceEEecc
Confidence            5789999  69999999999999999754


No 24 
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]}
Probab=77.95  E-value=1.1  Score=32.83  Aligned_cols=27  Identities=30%  Similarity=0.480  Sum_probs=23.2

Q ss_pred             EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .+.+.|+  .|.+++++|||.+++-+...
T Consensus        12 ~v~v~I~--Gq~v~~LLDTGAD~TVi~~~   38 (113)
T d4fiva_          12 EILIFVN--GYPIKFLLDTGADITILNRR   38 (113)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred             eEEEEEC--CEEEEEEEcCCCCcEEEecc
Confidence            4678887  69999999999999999764


No 25 
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=77.18  E-value=1.2  Score=31.10  Aligned_cols=27  Identities=33%  Similarity=0.322  Sum_probs=23.5

Q ss_pred             EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .+.+.||  .|..++++|||.+++-+..-
T Consensus        10 ~vtvkIg--Gq~~eaLLDTGADdTVle~i   36 (99)
T d3ecga1          10 VVTAYIE--GQPVEVLLDTGADDSIVAGI   36 (99)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred             eEEEEEC--CEEeeeecccCCCceeeecc
Confidence            5788999  69999999999999998643


No 26 
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=76.09  E-value=1.3  Score=31.83  Aligned_cols=27  Identities=30%  Similarity=0.367  Sum_probs=22.8

Q ss_pred             EEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           78 NVTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        78 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .+.+.|+  +|+++.++|||.+++-+...
T Consensus        10 ~~~i~I~--Gq~v~~LLDTGAD~TVI~~~   36 (104)
T d2fmba_          10 TTIVLIN--DTPLNVLLDTGADTSVLTTA   36 (104)
T ss_dssp             EEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred             EEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence            4677887  69999999999999988653


No 27 
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=56.13  E-value=4.8  Score=31.84  Aligned_cols=32  Identities=19%  Similarity=0.404  Sum_probs=25.9

Q ss_pred             CceeeEeeEEEECCEEeccCCCCEEEeccccccccCH
Q 013772          265 KYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSH  301 (436)
Q Consensus       265 ~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~  301 (436)
                      ..|+-.+..++++|+..     .|++|||.--+.|.+
T Consensus       108 ~~wqrp~vt~ki~gq~~-----ealldtgaddtv~e~  139 (203)
T d1hvca_         108 TLWQRPLVTIKIGGQLK-----EALLDTGADDTVLEE  139 (203)
T ss_dssp             CSSSCCEEEEEETTEEE-----EEEECTTCSSCEEES
T ss_pred             eecccceEEEecchhHH-----HHHhcccCCceEEec
Confidence            56888888899999874     589999998887643


No 28 
>d1nsoa_ b.50.1.1 (A:) Mason-Pfizer monkey virus protease {Simian retrovirus 1, SRV-1 [TaxId: 11942]}
Probab=51.87  E-value=2.9  Score=30.06  Aligned_cols=26  Identities=19%  Similarity=0.405  Sum_probs=21.6

Q ss_pred             EEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           79 VTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        79 ~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      +.+.|+  +|.++.++|||-+++-+...
T Consensus        12 ~~v~I~--G~~v~~LLDTGAD~TVI~~~   37 (107)
T d1nsoa_          12 LTLWLD--DKMFTGLINTGADVTIIKLE   37 (107)
T ss_dssp             EEEEET--TEEEEECCCSSCSSCBCCGG
T ss_pred             EEEEEC--CEEEEeeecCCCCcEEEecc
Confidence            567777  69999999999999888654


No 29 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=49.40  E-value=7.4  Score=33.33  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             CCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccccCHH
Q 013772          252 SRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSHV  302 (436)
Q Consensus       252 ~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~~  302 (436)
                      |.++.+|+..+  ..|.+.   |.||.+.     ..++||||++++.+|..
T Consensus         4 ~~~~~~~~~~d--~~Y~~~---i~vG~~~-----~~v~~DTGSs~~Wv~~~   44 (323)
T d1bxoa_           4 GVATNTPTAND--EEYITP---VTIGGTT-----LNLNFDTGSADLWVFST   44 (323)
T ss_dssp             EEEEEEECGGG--SCEEEE---EEETTEE-----EEEEEETTCCCEEECBT
T ss_pred             cccccccccCC--cEEEEE---EEECCcc-----EEEEEECCCcceEEECC
Confidence            45677887643  566544   7888754     35899999999999873


No 30 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=43.42  E-value=5.7  Score=33.98  Aligned_cols=44  Identities=20%  Similarity=0.430  Sum_probs=30.0

Q ss_pred             CCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccccCH
Q 013772          252 SRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSH  301 (436)
Q Consensus       252 ~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~  301 (436)
                      |+++.+|+....+..|.+   .|.||.-.   .+..+++|||++++.+|.
T Consensus         1 ~~~~svPl~~~~d~~Y~~---~i~vGtP~---q~~~~~~DTGSs~~Wv~~   44 (323)
T d3cmsa_           1 GEVASVPLTNYLDSQYFG---KIYLGTPP---QEFTVLFDTGSSDFWVPS   44 (323)
T ss_dssp             CCCEEEEEEEETTTEEEE---EEEETTTT---EEEEEEEETTCCCEEEEB
T ss_pred             CCceEEeeEeccCCEEEE---EEEECCCC---EEEEEEEECCCCceEEec
Confidence            467888987533455654   46776411   124699999999999876


No 31 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=37.91  E-value=13  Score=31.73  Aligned_cols=41  Identities=24%  Similarity=0.342  Sum_probs=29.6

Q ss_pred             CCcEEEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccccCHH
Q 013772          252 SRVVWTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSHV  302 (436)
Q Consensus       252 ~~~~~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~~  302 (436)
                      |.++..|+..  +.+|.   ..|.||.+.     ..++||||++.+.+|..
T Consensus         4 ~~~~~~~~~~--d~~Y~---~~i~iG~q~-----~~l~~DTGSs~~Wv~~~   44 (323)
T d1izea_           4 GSVTTNPTSN--DEEYI---TQVTVGDDT-----LGLDFDTGSADLWVFSS   44 (323)
T ss_dssp             EEEEEEECGG--GCCEE---EEEEETTEE-----EEEEEETTCCCCEECBT
T ss_pred             CcccccccCC--ccEEE---EEEEECCee-----EEEEEECCCcceEEEcC
Confidence            4566677754  35565   467888764     35899999999999974


No 32 
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=36.85  E-value=16  Score=28.64  Aligned_cols=29  Identities=31%  Similarity=0.131  Sum_probs=25.1

Q ss_pred             eEEEEEEeCCCCceEEEEEecCCCceEEecC
Q 013772           76 YYNVTVYVGQPPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        76 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .=.+.+.||  .|....++|||.+++-+..-
T Consensus       112 rp~vt~ki~--gq~~ealldtgaddtv~e~~  140 (203)
T d1hvca_         112 RPLVTIKIG--GQLKEALLDTGADDTVLEEM  140 (203)
T ss_dssp             CCEEEEEET--TEEEEEEECTTCSSCEEESC
T ss_pred             cceEEEecc--hhHHHHHhcccCCceEEecc
Confidence            457899999  59999999999999999754


No 33 
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=30.28  E-value=18  Score=25.40  Aligned_cols=33  Identities=12%  Similarity=0.211  Sum_probs=25.7

Q ss_pred             ceeeEeeEEEECCEEeccCCCCEEEeccccccccCHHH
Q 013772          266 YYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSHVA  303 (436)
Q Consensus       266 ~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~~~  303 (436)
                      -|.=.+..+.|+|+.+     .+++|||+..+.+....
T Consensus         5 L~~RP~~~i~I~Gq~v-----~~LLDTGAD~TVI~~~~   37 (104)
T d2fmba_           5 LEKRPTTIVLINDTPL-----NVLLDTGADTSVLTTAH   37 (104)
T ss_dssp             SSSCCEEEEEETTEEE-----EEEECTTCSSCEEEHHH
T ss_pred             cccCeEEEEEECCEEE-----EEEEeCCCCeEEEcccc
Confidence            3444566788899976     48999999999998743


No 34 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=27.35  E-value=49  Score=27.94  Aligned_cols=28  Identities=25%  Similarity=0.248  Sum_probs=21.9

Q ss_pred             EEEEeCCCC---ceEEEEEecCCCceEEecC
Q 013772           79 VTVYVGQPP---KPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        79 ~~i~iGtP~---q~~~v~~DTGSs~~wv~~~  106 (436)
                      ..|.||.-.   ....++||||++.+++|..
T Consensus       200 ~~i~v~~~~~~~~~~~~iiDSGts~~~lp~~  230 (330)
T d1oewa_         200 TGYAVGSGTFKSTSIDGIADTGTTLLYLPAT  230 (330)
T ss_dssp             EEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred             eEEEEEeeeeecCCcceeeccccccccCCHH
Confidence            458888743   4567899999999999964


No 35 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=23.99  E-value=14  Score=31.28  Aligned_cols=38  Identities=24%  Similarity=0.447  Sum_probs=24.4

Q ss_pred             EcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccccCH
Q 013772          258 SMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSH  301 (436)
Q Consensus       258 p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~  301 (436)
                      ++....+..|.++   |.||.-.-   +..+++|||++++.+|.
T Consensus         6 ~~~~~~d~~Y~~~---i~IGtP~Q---~~~l~~DTGS~~~Wv~~   43 (326)
T g1b5f.1           6 ALTNDRDTSYFGE---IGIGTPPQ---KFTVIFDTGSSVLWVPS   43 (326)
T ss_dssp             EEEEETTTEEEEE---EEETTTTE---EEEEEEETTCCCEEEEB
T ss_pred             eeeeccCCEEEEE---EEECCCCe---EEEEEEECCCcceEEec
Confidence            3433344667655   66764211   24699999999999875


No 36 
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=23.93  E-value=20  Score=31.22  Aligned_cols=33  Identities=15%  Similarity=0.327  Sum_probs=22.2

Q ss_pred             EEcccCCC-CceeeEeeEEEECCEEeccCCCCEEEeccccccccC
Q 013772          257 TSMSSDYT-KYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLS  300 (436)
Q Consensus       257 ~p~~~~~~-~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp  300 (436)
                      .|+..... ..|.+.   |.||.        +++||||++.+.+|
T Consensus         5 ~pi~~~~~~~~Y~~~---i~iGt--------pliiDTGSs~~Wvp   38 (381)
T d1t6ex_           5 APVTKDPATSLYTIP---FHDGA--------SLVLDVAGPLVWST   38 (381)
T ss_dssp             EEEEECTTTCCEEEE---EETTE--------EEEEETTCCCEEEC
T ss_pred             EeecccCCCCeEEEE---EEcCC--------ceEEECCCCceeec
Confidence            56654332 456555   45553        29999999999997


No 37 
>d2rspa_ b.50.1.1 (A:) Rous sarcoma virus protease {Rous sarcoma virus, strain pr-C [TaxId: 11886]}
Probab=23.83  E-value=18  Score=26.40  Aligned_cols=20  Identities=20%  Similarity=0.222  Sum_probs=17.8

Q ss_pred             CceEEEEEecCCCceEEecC
Q 013772           87 PKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        87 ~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .|.++.++|||-+++-+...
T Consensus        29 g~~i~~LLDTGAD~TVI~~~   48 (124)
T d2rspa_          29 SVYITALLDSGADITIISEE   48 (124)
T ss_dssp             EEEEEEEECTTCSSCEEETT
T ss_pred             CEEEEEEEcCCCCeEEEcCC
Confidence            58899999999999999765


No 38 
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=21.81  E-value=53  Score=27.55  Aligned_cols=27  Identities=30%  Similarity=0.373  Sum_probs=20.8

Q ss_pred             EEEeCCC--CceEEEEEecCCCceEEecC
Q 013772           80 TVYVGQP--PKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        80 ~i~iGtP--~q~~~v~~DTGSs~~wv~~~  106 (436)
                      .+.||..  .....++||||++.+++|..
T Consensus       201 ~i~i~~~~~~~~~~~iiDSGt~~~~lp~~  229 (325)
T d2apra_         201 RATVGTSTVASSFDGILDTGTTLLILPNN  229 (325)
T ss_dssp             EEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred             eEEECCEeecceeeeeccCCCccccCCHH
Confidence            4667764  23468999999999999964


No 39 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=21.45  E-value=19  Score=31.27  Aligned_cols=32  Identities=19%  Similarity=0.309  Sum_probs=22.5

Q ss_pred             eeEEEEEEe--CC-CCceEEEEEecCCCceEEecC
Q 013772           75 GYYNVTVYV--GQ-PPKPYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        75 ~~Y~~~i~i--Gt-P~q~~~v~~DTGSs~~wv~~~  106 (436)
                      ++|.+.+.+  |. ......++||||++.+++|..
T Consensus       237 ~~w~i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~  271 (373)
T d1miqa_         237 LYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSE  271 (373)
T ss_dssp             SSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHH
T ss_pred             ceEEEEEEEEECcEecCCcceEeccCCceeccCHH
Confidence            356655543  33 235668999999999999965


No 40 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=20.56  E-value=50  Score=28.09  Aligned_cols=18  Identities=17%  Similarity=0.353  Sum_probs=15.2

Q ss_pred             eEEEEEecCCCceEEecC
Q 013772           89 PYFLDLDTGSDLIWLQCD  106 (436)
Q Consensus        89 ~~~v~~DTGSs~~wv~~~  106 (436)
                      ...++||||++.+|+|..
T Consensus       227 ~~~~ilDSGts~~~lp~~  244 (357)
T d1mppa_         227 AQAFTIDTGTNFFIAPSS  244 (357)
T ss_dssp             EEEEEEETTCCSEEEEHH
T ss_pred             CcceEeeccCccccCCHH
Confidence            346799999999999965


No 41 
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=20.51  E-value=22  Score=30.09  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=26.4

Q ss_pred             EEEcccCCCCceeeEeeEEEECCEEeccCCCCEEEeccccccccCHH
Q 013772          256 WTSMSSDYTKYYSPGVAELFFGGKTTGLKNLPVVFDSGSSYTYLSHV  302 (436)
Q Consensus       256 ~~p~~~~~~~~~~v~l~~i~v~g~~i~~~~~~~iiDSGTt~~~lp~~  302 (436)
                      -+|+......+|.+.   |.||.-.   .+..+++|||++.+.+|..
T Consensus         4 ~vpl~n~~~~~Y~~~---i~iGtP~---q~~~~~iDTGSs~~Wv~~~   44 (329)
T d1dpja_           4 DVPLTNYLNAQYYTD---ITLGTPP---QNFKVILDTGSSNLWVPSN   44 (329)
T ss_dssp             EEECEEETTTEEEEE---EEETTTT---EEEEEEEETTCCCEEEEBT
T ss_pred             ceEeEEccCCEEEEE---EEEeCCC---eEEEEEEECCcccEEEECC
Confidence            467764333556554   5676411   1246999999999999863


Done!