Your job contains 1 sequence.
>013776
MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL
VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNG
PALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISG
SKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK
AGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG
RPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVT
RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA
PENLEGYRTSSTGNVQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013776
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126649 - symbol:UBP24 "ubiquitin-specific pro... 1021 4.7e-103 1
ASPGD|ASPL0000031525 - symbol:AN5186 species:162425 "Emer... 351 5.1e-31 1
UNIPROTKB|Q2NL57 - symbol:usp10-a "Ubiquitin carboxyl-ter... 322 8.5e-31 2
UNIPROTKB|Q7ZXR7 - symbol:usp10-b "Ubiquitin carboxyl-ter... 322 2.7e-29 2
UNIPROTKB|G4N4M0 - symbol:MGG_05996 "Ubiquitin C-terminal... 332 8.4e-29 1
DICTYBASE|DDB_G0275021 - symbol:ubpB "putative ubiquitin ... 260 1.6e-28 2
UNIPROTKB|Q6DIJ4 - symbol:usp10 "Ubiquitin carboxyl-termi... 315 6.9e-28 3
UNIPROTKB|F1S5V0 - symbol:USP10 "Uncharacterized protein"... 300 1.2e-26 1
UNIPROTKB|F1NG89 - symbol:USP10 "Ubiquitin carboxyl-termi... 306 1.5e-26 2
RGD|1561965 - symbol:Usp10 "ubiquitin specific peptidase ... 310 4.0e-26 2
UNIPROTKB|Q3KR59 - symbol:Usp10 "Ubiquitin carboxyl-termi... 310 4.0e-26 2
UNIPROTKB|Q5ZJN4 - symbol:USP10 "Ubiquitin carboxyl-termi... 306 9.7e-26 2
UNIPROTKB|F1NQY5 - symbol:USP10 "Ubiquitin carboxyl-termi... 306 1.0e-25 2
UNIPROTKB|Q14694 - symbol:USP10 "Ubiquitin carboxyl-termi... 302 1.3e-25 2
ZFIN|ZDB-GENE-030219-132 - symbol:usp10 "ubiquitin specif... 311 1.3e-25 2
MGI|MGI:894652 - symbol:Usp10 "ubiquitin specific peptida... 299 1.1e-24 2
UNIPROTKB|F1PEV7 - symbol:USP10 "Ubiquitin carboxyl-termi... 301 3.0e-24 1
UNIPROTKB|A5PJS6 - symbol:USP10 "Ubiquitin carboxyl-termi... 301 3.2e-24 2
FB|FBgn0052479 - symbol:CG32479 species:7227 "Drosophila ... 290 1.9e-22 1
UNIPROTKB|H3BNA1 - symbol:USP10 "Ubiquitin carboxyl-termi... 240 9.0e-20 1
POMBASE|SPBP8B7.21 - symbol:ubp3 "ubiquitin C-terminal hy... 252 7.0e-19 1
SGD|S000000953 - symbol:UBP3 "Ubiquitin-specific protease... 146 1.2e-17 4
UNIPROTKB|J3KT19 - symbol:USP10 "Ubiquitin carboxyl-termi... 194 1.1e-14 1
UNIPROTKB|H3BVF1 - symbol:USP10 "Ubiquitin carboxyl-termi... 124 7.4e-09 2
POMBASE|SPBC18H10.08c - symbol:ubp4 "ubiquitin C-terminal... 159 2.6e-08 1
UNIPROTKB|E2RGE7 - symbol:USP21 "Ubiquitin carboxyl-termi... 155 6.6e-08 1
UNIPROTKB|O57429 - symbol:USP2 "Ubiquitin carboxyl-termin... 151 7.7e-08 1
UNIPROTKB|F1MH36 - symbol:USP21 "Ubiquitin carboxyl-termi... 153 1.1e-07 1
UNIPROTKB|Q9UK80 - symbol:USP21 "Ubiquitin carboxyl-termi... 153 1.1e-07 1
UNIPROTKB|F1S196 - symbol:USP21 "Ubiquitin carboxyl-termi... 153 1.1e-07 1
UNIPROTKB|Q2KJ72 - symbol:USP21 "Ubiquitin carboxyl-termi... 152 1.4e-07 1
MGI|MGI:1858178 - symbol:Usp2 "ubiquitin specific peptida... 151 2.1e-07 1
RGD|621073 - symbol:Usp2 "ubiquitin specific peptidase 2"... 149 3.5e-07 1
UNIPROTKB|Q5U349 - symbol:Usp2 "Ubiquitin carboxyl-termin... 149 3.5e-07 1
UNIPROTKB|E9PPM2 - symbol:USP2 "Ubiquitin carboxyl-termin... 145 3.8e-07 1
UNIPROTKB|Q2KHV7 - symbol:USP2 "Ubiquitin carboxyl-termin... 148 4.4e-07 1
RGD|1588822 - symbol:Usp21 "ubiquitin specific peptidase ... 147 5.0e-07 1
SGD|S000002476 - symbol:DOA4 "Ubiquitin isopeptidase" spe... 148 7.8e-07 1
MGI|MGI:1353665 - symbol:Usp21 "ubiquitin specific peptid... 145 8.4e-07 1
UNIPROTKB|O75604 - symbol:USP2 "Ubiquitin carboxyl-termin... 145 9.3e-07 1
UNIPROTKB|F1SAF6 - symbol:USP2 "Ubiquitin carboxyl-termin... 142 9.8e-07 1
UNIPROTKB|E2RSX3 - symbol:USP2 "Ubiquitin carboxyl-termin... 144 1.2e-06 1
UNIPROTKB|F1NQJ6 - symbol:USP3 "Ubiquitin carboxyl-termin... 142 1.6e-06 1
UNIPROTKB|B4DKA8 - symbol:USP8 "Ubiquitin carboxyl-termin... 128 2.0e-06 3
UNIPROTKB|I3LI16 - symbol:USP2 "Ubiquitin carboxyl-termin... 142 2.0e-06 1
UNIPROTKB|F1S096 - symbol:LOC100738199 "Uncharacterized p... 136 2.3e-06 1
UNIPROTKB|P40818 - symbol:USP8 "Ubiquitin carboxyl-termin... 128 2.8e-06 3
ZFIN|ZDB-GENE-040426-1219 - symbol:usp20 "ubiquitin speci... 101 3.0e-06 4
ZFIN|ZDB-GENE-041212-59 - symbol:usp2a "ubiquitin specifi... 139 4.2e-06 1
RGD|1308852 - symbol:Usp3 "ubiquitin specific peptidase 3... 138 4.3e-06 1
UNIPROTKB|F1PD56 - symbol:USP20 "Ubiquitin carboxyl-termi... 98 4.9e-06 3
ASPGD|ASPL0000072219 - symbol:AN11102 species:162425 "Eme... 137 6.5e-06 1
RGD|1562061 - symbol:Usp17l5 "ubiquitin specific peptidas... 81 6.8e-06 3
RGD|1565607 - symbol:RGD1565607 "similar to mouse deubiqu... 81 6.8e-06 3
UNIPROTKB|Q5R5Z6 - symbol:USP20 "Ubiquitin carboxyl-termi... 98 7.6e-06 3
UNIPROTKB|H0YLB7 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 8.8e-06 1
UNIPROTKB|H0YKU8 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 9.3e-06 1
UNIPROTKB|F1N0I6 - symbol:USP3 "Ubiquitin carboxyl-termin... 135 9.4e-06 1
UNIPROTKB|I3LBG3 - symbol:USP20 "Ubiquitin carboxyl-termi... 99 9.5e-06 3
UNIPROTKB|Q6JHV3 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 1.1e-05 1
UNIPROTKB|H0YMI4 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 1.1e-05 1
UNIPROTKB|F1P4F0 - symbol:USP20 "Ubiquitin carboxyl-termi... 98 1.2e-05 3
UNIPROTKB|E2QZQ0 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 1.2e-05 1
UNIPROTKB|Q9Y6I4 - symbol:USP3 "Ubiquitin carboxyl-termin... 134 1.2e-05 1
MGI|MGI:2152450 - symbol:Usp3 "ubiquitin specific peptida... 134 1.2e-05 1
UNIPROTKB|A7Z056 - symbol:USP20 "Ubiquitin carboxyl-termi... 98 1.5e-05 3
UNIPROTKB|Q0IIM6 - symbol:USP8 "Ubiquitin carboxyl-termin... 129 1.7e-05 2
UNIPROTKB|Q9Y2K6 - symbol:USP20 "Ubiquitin carboxyl-termi... 98 1.9e-05 3
RGD|1304979 - symbol:Usp8 "ubiquitin specific peptidase 8... 93 1.9e-05 3
FB|FBgn0031187 - symbol:CG14619 species:7227 "Drosophila ... 115 1.9e-05 3
UNIPROTKB|F1RYL9 - symbol:USP8 "Ubiquitin carboxyl-termin... 127 2.0e-05 3
SGD|S000003733 - symbol:UBP12 "Ubiquitin-specific proteas... 137 2.1e-05 2
RGD|1307192 - symbol:Usp16 "ubiquitin specific peptidase ... 134 2.3e-05 1
RGD|1588758 - symbol:LOC689730 "similar to ubiquitin spec... 82 2.4e-05 3
CGD|CAL0001949 - symbol:orf19.3815 species:5476 "Candida ... 133 3.5e-05 1
UNIPROTKB|Q5A675 - symbol:UBP7 "Ubiquitin carboxyl-termin... 133 3.5e-05 1
UNIPROTKB|E2RH35 - symbol:USP8 "Ubiquitin carboxyl-termin... 129 4.2e-05 3
UNIPROTKB|B1WBD7 - symbol:usp20 "Ubiquitin carboxyl-termi... 95 4.3e-05 4
SGD|S000000946 - symbol:UBP5 "Putative ubiquitin-specific... 136 4.8e-05 2
UNIPROTKB|A0JM59 - symbol:usp20 "Ubiquitin carboxyl-termi... 95 5.3e-05 4
UNIPROTKB|E1BF70 - symbol:USP8 "Ubiquitin carboxyl-termin... 89 5.6e-05 3
UNIPROTKB|F5GXG2 - symbol:USP30 "Ubiquitin carboxyl-termi... 104 6.2e-05 1
WB|WBGene00010702 - symbol:usp-33 species:6239 "Caenorhab... 129 6.7e-05 1
UNIPROTKB|J9PAN5 - symbol:LOC609268 "Ubiquitin carboxyl-t... 83 9.6e-05 3
MGI|MGI:1921362 - symbol:Usp16 "ubiquitin specific peptid... 128 0.00010 1
WB|WBGene00000874 - symbol:cyk-3 species:6239 "Caenorhabd... 129 0.00012 1
SGD|S000001806 - symbol:UBP11 "Ubiquitin-specific proteas... 125 0.00018 1
UNIPROTKB|Q4R6X7 - symbol:USP16 "Ubiquitin carboxyl-termi... 125 0.00022 1
UNIPROTKB|F1PQJ0 - symbol:LOC100686685 "Uncharacterized p... 75 0.00022 3
DICTYBASE|DDB_G0293770 - symbol:DDB_G0293770 "putative ub... 126 0.00024 1
UNIPROTKB|F1NES4 - symbol:LOC100858727 "Uncharacterized p... 123 0.00024 1
TAIR|locus:2058490 - symbol:UBP5 "ubiquitin-specific prot... 125 0.00025 1
UNIPROTKB|E1C0G5 - symbol:E1C0G5 "Ubiquitin carboxyl-term... 125 0.00030 1
WB|WBGene00011216 - symbol:usp-46 species:6239 "Caenorhab... 120 0.00031 1
ZFIN|ZDB-GENE-050227-1 - symbol:fbxl22 "F-box and leucine... 121 0.00033 1
UNIPROTKB|E2QRF0 - symbol:USP45 "Ubiquitin carboxyl-termi... 123 0.00033 1
UNIPROTKB|E2R2N1 - symbol:LOC609437 "Ubiquitin carboxyl-t... 78 0.00034 3
UNIPROTKB|Q9Y5T5 - symbol:USP16 "Ubiquitin carboxyl-termi... 123 0.00036 1
DICTYBASE|DDB_G0284381 - symbol:DDB_G0284381 "putative ub... 124 0.00039 1
TAIR|locus:2037985 - symbol:UBP11 "AT1G32850" species:370... 123 0.00040 1
WARNING: Descriptions of 13 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2126649 [details] [associations]
symbol:UBP24 "ubiquitin-specific protease 24"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 EMBL:AL022198
EMBL:AL161577 GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11841
EMBL:AF302672 EMBL:AY127002 EMBL:BT000568 IPI:IPI00539881
PIR:F85361 RefSeq:NP_001190875.1 RefSeq:NP_567860.1
RefSeq:NP_974644.1 UniGene:At.22252 ProteinModelPortal:Q9FPS3
SMR:Q9FPS3 STRING:Q9FPS3 MEROPS:C19.A14 PaxDb:Q9FPS3 PRIDE:Q9FPS3
EnsemblPlants:AT4G30890.1 EnsemblPlants:AT4G30890.2
EnsemblPlants:AT4G30890.3 GeneID:829213 KEGG:ath:AT4G30890
TAIR:At4g30890 HOGENOM:HOG000084329 InParanoid:Q9FPS3 OMA:KIMILHL
PhylomeDB:Q9FPS3 ProtClustDB:CLSN2689694 Genevestigator:Q9FPS3
Uniprot:Q9FPS3
Length = 551
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 235/447 (52%), Positives = 299/447 (66%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+FVFGSFTE ETRS+ + + + K P +S+ +K +QFGSLN E+S
Sbjct: 1 MSEKKVFVFGSFTEHETRSFFEQKPT---KDPQNSK--DKCVGS--IQFGSLNLAAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +ND D ++ P+ +NG
Sbjct: 54 VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112
Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
IK S + +L+NGV +K D I + + G ++P + SKF L D D
Sbjct: 113 IIKEISESNKSLNNGVA-VKTDPIGLDNLSMS-DGESDPVYKASSSKFQAL-----DNED 165
Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
++ + + SI K +K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LLQ+++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTG 433
V IEDAL LFSA E+LEGYR S TG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTG 429
>ASPGD|ASPL0000031525 [details] [associations]
symbol:AN5186 species:162425 "Emericella nidulans"
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
EMBL:BN001305 GO:GO:0006511 EMBL:AACD01000089 GO:GO:0004221
eggNOG:COG5533 KO:K11841 OrthoDB:EOG4TJ035 RefSeq:XP_662790.1
EnsemblFungi:CADANIAT00003182 GeneID:2871476 KEGG:ani:AN5186.2
HOGENOM:HOG000209472 OMA:KVAYLLF Uniprot:Q5B2P4
Length = 840
Score = 351 (128.6 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 85/248 (34%), Positives = 134/248 (54%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSDF 256
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 385 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGKRASHSFHSDFPMVDALIMFMKEF 444
Query: 257 ---DTPSGGSSKKKNISVLDI---GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
D + + ++ G F P V++ P + G Q+DAQEF
Sbjct: 445 RVIDAARNEEQLRMRLKANELEQYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 501
Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA- 369
L F++++MH+E + ++S A+T D W VG K K AVTR+ + S
Sbjct: 502 LGFLLEEMHEECARATSANSSTEPAST---DSENGDGWLEVGHKQKPAVTRSSGHIASES 558
Query: 370 -LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
++ IFGG+++S + GNKAS T++P+ L LDI + +H I DAL+ + PE+++G
Sbjct: 559 PITKIFGGKIRSEFRVPGNKASVTLEPYQPLQLDIGAPEIHNIVDALKGLTKPESIQGDF 618
Query: 429 TSSTG-NV 435
SS G NV
Sbjct: 619 NSSRGPNV 626
>UNIPROTKB|Q2NL57 [details] [associations]
symbol:usp10-a "Ubiquitin carboxyl-terminal hydrolase 10-A"
species:8355 "Xenopus laevis" [GO:0002039 "p53 binding"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0010506 "regulation of autophagy" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0030330
"DNA damage response, signal transduction by p53 class mediator"
evidence=ISS] [GO:0044325 "ion channel binding" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0006511
GO:GO:0005769 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0002039 GO:GO:0030330 KO:K11841 EMBL:BC110953
RefSeq:NP_001090293.1 UniGene:Xl.45461 ProteinModelPortal:Q2NL57
MEROPS:C19.018 PRIDE:Q2NL57 GeneID:779202 KEGG:xla:779202
Xenbase:XB-GENE-966190 HOVERGEN:HBG059823 Uniprot:Q2NL57
Length = 791
Score = 322 (118.4 bits), Expect = 8.5e-31, Sum P(2) = 8.5e-31
Identities = 79/219 (36%), Positives = 122/219 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTP 292
P P + +FV +++F P + + + V DI G PF P+ +L F
Sbjct: 448 PCTSTPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK- 505
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE-- 344
+S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 506 ---SSLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVN 562
Query: 345 -------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFL 397
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF
Sbjct: 563 KEEQEGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFF 622
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI SE + T++DAL A E+++GY T + V+
Sbjct: 623 TLQLDIQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 661
Score = 213 (80.0 bits), Expect = 7.5e-15, Sum P(2) = 7.5e-15
Identities = 54/150 (36%), Positives = 87/150 (58%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TR-DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + T+ P
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451
Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F P + + + V DI G PF P+ +L F +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQ 326
S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALK 536
Score = 52 (23.4 bits), Expect = 8.5e-31, Sum P(2) = 8.5e-31
Identities = 29/136 (21%), Positives = 55/136 (40%)
Query: 2 SDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEK--PAEDKELQFGS----LNFG 55
S S+ ++FG F+++E + + + +V+ P + P + Q G + FG
Sbjct: 3 SPSEQYIFGEFSDDEFKQFFVTARC-TVELPPYNEHFFPCGPQSSGDFQDGEECPRIEFG 61
Query: 56 TESSLVGTTDEPNGK--SVVDGPVVFQPSTLLKKDDKVK-SVGASNDHDLGAVGCPKENG 112
E + T PN S+ P +L K S ++++ A+ C
Sbjct: 62 IEEVIDHNTTLPNNTDYSISSNLNPQAPEFILTCSSSPKDSNNVLHENNFDAIDCQFSES 121
Query: 113 HIKNSTNGPALSNGVN 128
I + + G A S+G +
Sbjct: 122 SIPDGS-GNADSDGTS 136
Score = 38 (18.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 112 GHIKNST--NGPALSNGVNHLKADGIDFS 138
G + + T NG A S G+N + D D +
Sbjct: 161 GDVPSETLLNGHANSAGLNSISTDDPDLA 189
>UNIPROTKB|Q7ZXR7 [details] [associations]
symbol:usp10-b "Ubiquitin carboxyl-terminal hydrolase 10-B"
species:8355 "Xenopus laevis" [GO:0002039 "p53 binding"
evidence=ISS] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0010506 "regulation of autophagy" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0030330
"DNA damage response, signal transduction by p53 class mediator"
evidence=ISS] [GO:0044325 "ion channel binding" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0006511
GO:GO:0005769 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0002039 GO:GO:0030330 KO:K11841 MEROPS:C19.018
HOVERGEN:HBG059823 EMBL:BC044285 RefSeq:NP_001080643.1
UniGene:Xl.2271 ProteinModelPortal:Q7ZXR7 GeneID:380335
KEGG:xla:380335 CTD:9100 Uniprot:Q7ZXR7
Length = 805
Score = 322 (118.4 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 78/219 (35%), Positives = 122/219 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTP 292
P P + +FV +++F P + + + + DI G PF P+ +L F
Sbjct: 462 PCTSTPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-IKDIRPGAPFEPTYIYRLLTVFK- 519
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE-- 344
+S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 520 ---SSLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVN 576
Query: 345 -------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFL 397
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF
Sbjct: 577 KEEQEGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFF 636
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI SE + T++DAL A E+++GY T + V+
Sbjct: 637 TLQLDIQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 675
Score = 213 (80.0 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 59/182 (32%), Positives = 97/182 (53%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TR-DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + T+ P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F P + + + + DI G PF P+ +L F +
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-IKDIRPGAPFEPTYIYRLLTVFK----S 520
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWET 350
S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E ++ E
Sbjct: 521 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQ 580
Query: 351 VG 352
G
Sbjct: 581 EG 582
Score = 38 (18.4 bits), Expect = 2.7e-29, Sum P(2) = 2.7e-29
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 2 SDSKLFVFGSFTEEETRSW 20
S S ++FG F+++E + +
Sbjct: 3 SPSGQYIFGEFSDDEFKQF 21
>UNIPROTKB|G4N4M0 [details] [associations]
symbol:MGG_05996 "Ubiquitin C-terminal hydrolase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
EMBL:CM001233 GO:GO:0006511 GO:GO:0004221 KO:K11841
RefSeq:XP_003711842.1 ProteinModelPortal:G4N4M0
EnsemblFungi:MGG_05996T0 GeneID:2683979 KEGG:mgr:MGG_05996
Uniprot:G4N4M0
Length = 1024
Score = 332 (121.9 bits), Expect = 8.4e-29, P = 8.4e-29
Identities = 87/254 (34%), Positives = 138/254 (54%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDFDT 258
PRGLIN+GN+C++N+ LQ L+ C+PF L++ + + P + A + F+ DF
Sbjct: 569 PRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDFKI 628
Query: 259 PSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQEF 310
S + K+ + G PF+P ++EA+ K +P S R Q+DA+EF
Sbjct: 629 IDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAEEF 683
Query: 311 LSFIMDQMHDE---LLKLQGES--TSI---NGANTALVSLAEED-EWETVGPKNKSAVTR 361
L F ++ +HDE +++ G+ TS + A T S D +W VGP+ ++A+TR
Sbjct: 684 LGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAITR 743
Query: 362 TQ--SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
+ S + S ++ IFGG+L+S ++ G K S T++P+ L LDI + V I DALR +
Sbjct: 744 SSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRHLT 803
Query: 420 APENLEGYRTSSTG 433
PE+L G S G
Sbjct: 804 NPESLRGDFNSPRG 817
>DICTYBASE|DDB_G0275021 [details] [associations]
symbol:ubpB "putative ubiquitin carboxyl-terminal
hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
dictyBase:DDB_G0275021 GO:GO:0008234 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
HSSP:P54578 KO:K11841 eggNOG:COG5560 EMBL:AF093690
RefSeq:XP_643807.1 ProteinModelPortal:O96612 MEROPS:C19.A68
EnsemblProtists:DDB0191402 GeneID:8619853 KEGG:ddi:DDB_G0275021
InParanoid:O96612 OMA:INTSNTC Uniprot:O96612
Length = 451
Score = 260 (96.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 60/145 (41%), Positives = 86/145 (59%)
Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALVSLAEEDEWETVGP 353
NS+ Q+DAQEFL F++D +H+E L L + + +T + +D WE VG
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIVDDNWEVVGK 250
Query: 354 KNKSAV-TRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
K K+A+ T +Q LP +S IF G L+S G+K S TV+PF LHLDI E ++++
Sbjct: 251 KGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEEINSL 310
Query: 412 EDALRLFSAPENLEGYRTSSTGNVQ 436
EDAL+ F PE +EGY T ST ++
Sbjct: 311 EDALKFFMKPEIIEGY-TCSTKKIE 334
Score = 118 (46.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 186 MKAINE-PVKS-VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG- 242
MK I E P KS + RGLIN+ N CF+N LQ+L C F+++++ L D+ G
Sbjct: 1 MKNIEEMPSKSQLVAHRSRGLINTSNTCFMNVILQSLTGCQLFLRVIKNLS--DLEDLGK 58
Query: 243 YPTLTAFVGFVSD-FDTPS 260
YPTL +F F ++ F P+
Sbjct: 59 YPTLHSFNQFYTEYFSNPT 77
>UNIPROTKB|Q6DIJ4 [details] [associations]
symbol:usp10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0002039 "p53
binding" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769 "early endosome"
evidence=ISS] [GO:0010506 "regulation of autophagy" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0030330
"DNA damage response, signal transduction by p53 class mediator"
evidence=ISS] [GO:0044325 "ion channel binding" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0006511
GO:GO:0005769 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0002039 GO:GO:0030330 eggNOG:COG5533 KO:K11841
MEROPS:C19.018 HOVERGEN:HBG059823 CTD:9100 HOGENOM:HOG000285959
OrthoDB:EOG4FN4H7 EMBL:CR855702 EMBL:BC075544 RefSeq:NP_001006761.1
UniGene:Str.51 ProteinModelPortal:Q6DIJ4 STRING:Q6DIJ4
GeneID:448441 KEGG:xtr:448441 Xenbase:XB-GENE-966184
InParanoid:Q6DIJ4 Uniprot:Q6DIJ4
Length = 805
Score = 315 (115.9 bits), Expect = 6.9e-28, Sum P(3) = 6.9e-28
Identities = 77/219 (35%), Positives = 121/219 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTP 292
P P + +FV +++F P + + + + DI G PF P+ +L F
Sbjct: 462 PCTSTPMIDSFVRLMNEFTNMPILPKAKQASGEKV-IRDIRPGAPFEPAYIYRLLTVFK- 519
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE-- 344
+S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + E
Sbjct: 520 ---SSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEIN 576
Query: 345 -------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFL 397
++EWE VGP++KS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF
Sbjct: 577 KDEQEGSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFF 636
Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI SE + T++DAL A E+++GY T + V+
Sbjct: 637 TLQLDIQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 675
Score = 214 (80.4 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 53/150 (35%), Positives = 87/150 (58%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TR-DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + T+ P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F P + + + + DI G PF P+ +L F +
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKV-IRDIRPGAPFEPAYIYRLLTVFK----S 520
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQ 326
S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 521 SLSEKGRQEDAEEYLGFILNGLHEEMLSLK 550
Score = 40 (19.1 bits), Expect = 6.9e-28, Sum P(3) = 6.9e-28
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 112 GHIKNST--NGPALSNGVNHLKADGIDFS 138
G + + T NG A S G+N + D D +
Sbjct: 175 GDVPSETLVNGHANSTGLNSISTDDPDLA 203
Score = 38 (18.4 bits), Expect = 6.9e-28, Sum P(3) = 6.9e-28
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 2 SDSKLFVFGSFTEEETRSW 20
S S ++FG F+++E + +
Sbjct: 3 SPSGQYIFGEFSDDEFKQF 21
>UNIPROTKB|F1S5V0 [details] [associations]
symbol:USP10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00550000074994 EMBL:FP102375
Ensembl:ENSSSCT00000002961 OMA:HEEMLIL ArrayExpress:F1S5V0
Uniprot:F1S5V0
Length = 309
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 65/158 (41%), Positives = 100/158 (63%)
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E ++ NG + LV E
Sbjct: 22 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPDNEKLTVSNGPQSHLVDEDEQE 81
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 82 EPGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 141
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 142 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 179
>UNIPROTKB|F1NG89 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
GO:GO:0006511 InterPro:IPR009818 Pfam:PF07145 GO:GO:0004221
GeneTree:ENSGT00550000074994 EMBL:AADN02064349 EMBL:AADN02064350
EMBL:AADN02064351 EMBL:AADN02064352 IPI:IPI00570950
Ensembl:ENSGALT00000009099 ArrayExpress:F1NG89 Uniprot:F1NG89
Length = 716
Score = 306 (112.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 74/184 (40%), Positives = 108/184 (58%)
Query: 271 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ-- 326
V DI G F P+ +L + +S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 469 VRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLTLKKL 524
Query: 327 ----GESTSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSD 372
E S+ NG V EE DEWE VGP+NKS+VTR F+ + ++D
Sbjct: 525 LSPHNEKLSVSNGPEVQTVREEEEQDEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITD 584
Query: 373 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 585 IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 644
Query: 433 GNVQ 436
V+
Sbjct: 645 QEVE 648
Score = 208 (78.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 60/186 (32%), Positives = 100/186 (53%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 382 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 437
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKKK--NISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P +K+ + V DI G F P+ +L + +S
Sbjct: 438 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 493
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDEWET 350
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V EE + +
Sbjct: 494 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 553
Query: 351 VGPKNK 356
G +++
Sbjct: 554 EGSEDE 559
Score = 51 (23.0 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 25/125 (20%), Positives = 54/125 (43%)
Query: 146 GHANPSPISKFHVLCDGNIDGRDQN-AAACNSSISGSKEVPMK-AINEPVKSVKDLLPRG 203
G +P ++F V +++ N +C +G + ++ +NE +++ +L
Sbjct: 4 GEFSPDEFNQFFVTPRCSVELPPYNETVSCGIKSTGEEYQRIEFGVNEVIETESSVLNNT 63
Query: 204 LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSDFDTPSGG 262
+ + A + ++SC+P + E I + PTLT G ++ D SGG
Sbjct: 64 DYSISSTLNPQAP-EFILSCAPAQKTPDETNYNSIDCQFSDPTLTLDSGSNAENDGLSGG 122
Query: 263 SSKKK 267
+++
Sbjct: 123 LGQRE 127
Score = 40 (19.1 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 118 TNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPIS 154
TNG L + A+G++ + A P S
Sbjct: 263 TNGQTLESSGEDTAANGVELHTVESTDSDQAKPEEAS 299
>RGD|1561965 [details] [associations]
symbol:Usp10 "ubiquitin specific peptidase 10" species:10116
"Rattus norvegicus" [GO:0002039 "p53 binding" evidence=ISO;ISS]
[GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA;ISO;ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0005769 "early
endosome" evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0010506
"regulation of autophagy" evidence=ISO;ISS] [GO:0016579 "protein
deubiquitination" evidence=ISO;ISS] [GO:0030330 "DNA damage
response, signal transduction by p53 class mediator"
evidence=ISO;ISS] [GO:0044325 "ion channel binding"
evidence=ISO;ISS] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA;ISO] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
RGD:1561965 GO:GO:0005634 GO:GO:0044325 GO:GO:0006281 GO:GO:0006914
GO:GO:0010506 GO:GO:0045111 GO:GO:0006511 GO:GO:0005769
GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GO:GO:0002039 GO:GO:0030330 eggNOG:COG5533 KO:K11841 MEROPS:C19.018
HOVERGEN:HBG059823 CTD:9100 GeneTree:ENSGT00550000074994
HOGENOM:HOG000285959 OrthoDB:EOG4FN4H7 EMBL:BC105892
IPI:IPI00359825 RefSeq:NP_001029318.1 UniGene:Rn.24862
ProteinModelPortal:Q3KR59 STRING:Q3KR59 PhosphoSite:Q3KR59
PRIDE:Q3KR59 Ensembl:ENSRNOT00000022432 GeneID:307905
KEGG:rno:307905 UCSC:RGD:1561965 InParanoid:Q3KR59 NextBio:658066
ArrayExpress:Q3KR59 Genevestigator:Q3KR59 Uniprot:Q3KR59
Length = 794
Score = 310 (114.2 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 78/218 (35%), Positives = 122/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L
Sbjct: 451 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV---- 506
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E
Sbjct: 507 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELE 566
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGPKNK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 567 DTGEGSEDEWEQVGPKNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 626
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 627 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 664
Score = 198 (74.8 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
+++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 402 VHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 457
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L + +S+S
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAEEDEWETVG 352
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E++E E G
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLI---EDEELEDTG 569
Score = 42 (19.8 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 7 FVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKEL---QFGSLNFGTE 57
++FG F+ +E + + S P S + AE++ L + + FG +
Sbjct: 8 YIFGDFSPDEFNQFFVTPRSSVELPPYSGTQCGIQAEEELLDGQEHQRIEFGVD 61
>UNIPROTKB|Q3KR59 [details] [associations]
symbol:Usp10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1561965 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0045111
GO:GO:0006511 GO:GO:0005769 GO:GO:0004197 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0002039 GO:GO:0030330
eggNOG:COG5533 KO:K11841 MEROPS:C19.018 HOVERGEN:HBG059823 CTD:9100
GeneTree:ENSGT00550000074994 HOGENOM:HOG000285959 OrthoDB:EOG4FN4H7
EMBL:BC105892 IPI:IPI00359825 RefSeq:NP_001029318.1
UniGene:Rn.24862 ProteinModelPortal:Q3KR59 STRING:Q3KR59
PhosphoSite:Q3KR59 PRIDE:Q3KR59 Ensembl:ENSRNOT00000022432
GeneID:307905 KEGG:rno:307905 UCSC:RGD:1561965 InParanoid:Q3KR59
NextBio:658066 ArrayExpress:Q3KR59 Genevestigator:Q3KR59
Uniprot:Q3KR59
Length = 794
Score = 310 (114.2 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 78/218 (35%), Positives = 122/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L
Sbjct: 451 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV---- 506
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E
Sbjct: 507 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELE 566
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGPKNK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 567 DTGEGSEDEWEQVGPKNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 626
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 627 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 664
Score = 198 (74.8 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 59/179 (32%), Positives = 97/179 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
+++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 402 VHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 457
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L + +S+S
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAEEDEWETVG 352
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E++E E G
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLI---EDEELEDTG 569
Score = 42 (19.8 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 7 FVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKEL---QFGSLNFGTE 57
++FG F+ +E + + S P S + AE++ L + + FG +
Sbjct: 8 YIFGDFSPDEFNQFFVTPRSSVELPPYSGTQCGIQAEEELLDGQEHQRIEFGVD 61
>UNIPROTKB|Q5ZJN4 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0010506
"regulation of autophagy" evidence=ISS] [GO:0005769 "early
endosome" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044325 "ion channel binding" evidence=ISS] [GO:0030330 "DNA
damage response, signal transduction by p53 class mediator"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0002039 "p53
binding" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0006511
GO:GO:0005769 GO:GO:0004197 InterPro:IPR009818 Pfam:PF07145
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0002039
GO:GO:0030330 eggNOG:COG5533 KO:K11841 MEROPS:C19.018
HOVERGEN:HBG059823 CTD:9100 HOGENOM:HOG000285959 OrthoDB:EOG4FN4H7
EMBL:AJ720400 IPI:IPI00819631 RefSeq:NP_001006130.1
UniGene:Gga.3193 ProteinModelPortal:Q5ZJN4 STRING:Q5ZJN4
GeneID:415817 KEGG:gga:415817 InParanoid:Q5ZJN4 NextBio:20819362
Uniprot:Q5ZJN4
Length = 785
Score = 306 (112.8 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 74/184 (40%), Positives = 108/184 (58%)
Query: 271 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ-- 326
V DI G F P+ +L + +S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 476 VRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLTLKKL 531
Query: 327 ----GESTSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSD 372
E S+ NG V EE DEWE VGP+NKS+VTR F+ + ++D
Sbjct: 532 LSPHNEKLSVSNGPEVQTVREEEEQDEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITD 591
Query: 373 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 592 IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 651
Query: 433 GNVQ 436
V+
Sbjct: 652 QEVE 655
Score = 208 (78.3 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 60/186 (32%), Positives = 100/186 (53%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKKK--NISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P +K+ + V DI G F P+ +L + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDEWET 350
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V EE + +
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560
Query: 351 VGPKNK 356
G +++
Sbjct: 561 EGSEDE 566
Score = 45 (20.9 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 220 LMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
++SC+P + E I + PTLT G ++ D SGG +++
Sbjct: 86 ILSCAPAQKTPDETNYNSIDCQFSDPTLTLDSGSNAENDGLSGGLGQRE 134
Score = 40 (19.1 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 118 TNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPIS 154
TNG L + A+G++ + A P S
Sbjct: 270 TNGQTLESSGEDTAANGVELHTVESTDSDQAKPEEAS 306
>UNIPROTKB|F1NQY5 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0010506 "regulation of
autophagy" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0030330 "DNA damage response, signal transduction
by p53 class mediator" evidence=IEA] [GO:0044325 "ion channel
binding" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634
GO:GO:0010506 GO:GO:0045111 GO:GO:0006511 GO:GO:0005769
GO:GO:0004197 InterPro:IPR009818 Pfam:PF07145 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0030330
GeneTree:ENSGT00550000074994 OMA:GQEYQRI IPI:IPI00819631
EMBL:AADN02064349 EMBL:AADN02064350 EMBL:AADN02064351
EMBL:AADN02064352 Ensembl:ENSGALT00000039042 ArrayExpress:F1NQY5
Uniprot:F1NQY5
Length = 795
Score = 306 (112.8 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 74/184 (40%), Positives = 108/184 (58%)
Query: 271 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ-- 326
V DI G F P+ +L + +S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 486 VRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLTLKKL 541
Query: 327 ----GESTSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSD 372
E S+ NG V EE DEWE VGP+NKS+VTR F+ + ++D
Sbjct: 542 LSPHNEKLSVSNGPEVQTVREEEEQDEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITD 601
Query: 373 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 602 IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 661
Query: 433 GNVQ 436
V+
Sbjct: 662 QEVE 665
Score = 191 (72.3 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 60/191 (31%), Positives = 100/191 (52%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNA-----TLQALMSCSPFVQLLQEL---RTRD 237
+K +++PV L PRGLIN GN C++NA TLQAL++C P L++ +
Sbjct: 394 VKLVHKPVS----LQPRGLINKGNWCYINAVSLPWTLQALVACPPMYHLMKSIPMYSKSQ 449
Query: 238 IPKAGYPTLTAFVGFVSDF-DTPSGGSSKKK--NISVLDI--GRPFSPSMFEAVLKNFTP 292
P P + +FV +++F + P +K+ + V DI G F P+ +L
Sbjct: 450 RPCTSTPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV--- 506
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE 345
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V EE
Sbjct: 507 -IKSSLSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEE 565
Query: 346 DEWETVGPKNK 356
+ + G +++
Sbjct: 566 QDEQGEGSEDE 576
Score = 45 (20.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 220 LMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
++SC+P + E I + PTLT G ++ D SGG +++
Sbjct: 91 ILSCAPAQKTPDETNYNSIDCQFSDPTLTLDSGSNAENDGLSGGLGQRE 139
Score = 40 (19.1 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 118 TNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPIS 154
TNG L + A+G++ + A P S
Sbjct: 275 TNGQTLESSGEDTAANGVELHTVESTDSDQAKPEEAS 311
Score = 37 (18.1 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 16/69 (23%), Positives = 26/69 (37%)
Query: 41 PAEDKELQFGSLNFGTESSLVGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDH 100
P + E++ G + + + + +V PV QP L+ K + S
Sbjct: 365 PEKQVEVKEGPVPVSEDPVAIKIAELLENVKLVHKPVSLQPRGLINKGNWCYINAVSLPW 424
Query: 101 DLGA-VGCP 108
L A V CP
Sbjct: 425 TLQALVACP 433
>UNIPROTKB|Q14694 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0030330 "DNA damage response,
signal transduction by p53 class mediator" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=IMP;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IDA;IMP] [GO:0016579
"protein deubiquitination" evidence=IDA;IMP] [GO:0002039 "p53
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0044325 "ion channel binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IMP] [GO:0010506 "regulation of autophagy"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634
GO:GO:0044325 GO:GO:0006281 GO:GO:0006914 GO:GO:0010506
GO:GO:0045111 GO:GO:0006511 GO:GO:0005769 GO:GO:0004197
InterPro:IPR009818 Pfam:PF07145 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0030330 eggNOG:COG5533 KO:K11841 MEROPS:C19.018
HOVERGEN:HBG059823 CTD:9100 HOGENOM:HOG000285959 OMA:GQEYQRI
OrthoDB:EOG4FN4H7 EMBL:D80012 EMBL:AK299618 EMBL:AK315570
EMBL:AL162049 EMBL:BX537402 EMBL:AC009116 EMBL:AC025280
EMBL:BC000263 IPI:IPI00291946 IPI:IPI00941385 IPI:IPI00955965
RefSeq:NP_001259004.1 RefSeq:NP_005144.2 UniGene:Hs.136778
ProteinModelPortal:Q14694 SMR:Q14694 IntAct:Q14694 STRING:Q14694
PhosphoSite:Q14694 DMDM:2501458 PaxDb:Q14694 PRIDE:Q14694
DNASU:9100 Ensembl:ENST00000219473 Ensembl:ENST00000570191
GeneID:9100 KEGG:hsa:9100 UCSC:uc002fii.3 UCSC:uc010voe.2
GeneCards:GC16P084734 H-InvDB:HIX0173245 HGNC:HGNC:12608
HPA:HPA006731 HPA:HPA006749 MIM:609818 neXtProt:NX_Q14694
PharmGKB:PA37234 InParanoid:Q14694 ChiTaRS:USP10 GenomeRNAi:9100
NextBio:34113 ArrayExpress:Q14694 Bgee:Q14694 CleanEx:HS_USP10
Genevestigator:Q14694 GermOnline:ENSG00000103194 Uniprot:Q14694
Length = 798
Score = 302 (111.4 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 78/218 (35%), Positives = 122/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L T +
Sbjct: 455 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLL---TVN 511
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE-- 344
+S+S + RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E
Sbjct: 512 -KSSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQE 570
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 571 EQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 630
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 631 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 668
Score = 194 (73.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L T + +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLL---TVN-KSSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDE 347
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E++E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEE 571
Score = 50 (22.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 53/253 (20%), Positives = 93/253 (36%)
Query: 4 SKLFVFGSFTEEETRSWLQSQSSGSVKKPVS------SRRAEKPAEDKELQFGSLNFGTE 57
S ++FG F+ +E + + S P S ++ +K + +E Q + FG +
Sbjct: 5 SPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQAVDKLPDGQEYQ--RIEFGVD 62
Query: 58 SSLVGTTDEPNGKSV-VDGPVVFQ-PSTLLK-KDDKVKSVGASNDHDLGAVGC--PKENG 112
+ + P S + + Q P +L K+ G + + G++ C P
Sbjct: 63 EVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPDGITKEASYGSIDCQYPGSAL 122
Query: 113 HIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAA 172
+ S+N A L+ DG+ Q P + L DG D A
Sbjct: 123 ALDGSSNVEA-----EVLENDGVS-GGLGQRERKKKKKRPPGYYSYLKDGGDDSISTEAL 176
Query: 173 ACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNAT--LQALMSCSPFVQLL 230
N + + VP E + + D+ P + N N+T + ++ SPF L
Sbjct: 177 V-NGHANSA--VPNSVSAEDAEFMGDMPPSVTPRTCNSP-QNSTDSVSDIVPDSPFPGAL 232
Query: 231 -QELRTRDIPKAG 242
+ RT P+ G
Sbjct: 233 GSDTRTAGQPEGG 245
Score = 41 (19.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 23/87 (26%), Positives = 29/87 (33%)
Query: 55 GTESSLVGTTDEPNGKSVVD-GPVVFQPS----TLLKKDDKVKSVGASNDHDLGAVGCPK 109
G S T +P G D G F TL + VG +LG
Sbjct: 230 GALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGTDTTENLGVA---- 285
Query: 110 ENGHIKNSTNGPALSNGVNHLKADGID 136
NG I S+ +NGV + ID
Sbjct: 286 -NGQILESSGEGTATNGVELHTTESID 311
>ZFIN|ZDB-GENE-030219-132 [details] [associations]
symbol:usp10 "ubiquitin specific peptidase 10"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-030219-132 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00550000074994
EMBL:CU693489 EMBL:FP067427 IPI:IPI00502066
Ensembl:ENSDART00000111762 Uniprot:E7F2D1
Length = 870
Score = 311 (114.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 73/201 (36%), Positives = 118/201 (58%)
Query: 254 SDFDTPSGGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
S+ PS + +K + L +G PF P+ V K T + +S+S + RQEDA+E+
Sbjct: 511 SNMPVPSKAKQQAAGEKILKDLRVGAPFEPTY---VYKLLTL-IKSSLSEKGRQEDAEEY 566
Query: 311 LSFIMDQMHDELLKL-------QGESTSINGANT--------ALVSLAEEDEWETVGPKN 355
L FI++ +H+E+L L + ++ + NG + A +DEWE VGP+N
Sbjct: 567 LGFILNGLHEEMLALKKLISPQEEKAPTPNGPESQPGVEEDPAEKEEGSDDEWEQVGPRN 626
Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
K+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LDI SE + T+++AL
Sbjct: 627 KTSITRQADFIRTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSEKIRTVQEAL 686
Query: 416 RLFSAPENLEGYRTSSTGNVQ 436
+ A E+++GY T S ++
Sbjct: 687 EVLVARESVQGYTTKSKQEIE 707
Score = 219 (82.2 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 55/150 (36%), Positives = 86/150 (57%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 441 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLFSETQRPCTS 496
Query: 243 YPTLTAFVGFVSDFDT---PSGGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
P + F+ V++F PS + +K + L +G PF P+ V K T + +
Sbjct: 497 TPMMDNFIRLVNEFSNMPVPSKAKQQAAGEKILKDLRVGAPFEPTY---VYKLLTL-IKS 552
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQ 326
S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 553 SLSEKGRQEDAEEYLGFILNGLHEEMLALK 582
Score = 37 (18.1 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 2 SDSKLFVFGSFTEEE 16
S S ++FG F+ +E
Sbjct: 3 SQSNQYIFGEFSPDE 17
>MGI|MGI:894652 [details] [associations]
symbol:Usp10 "ubiquitin specific peptidase 10" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0010506 "regulation of autophagy" evidence=ISO] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030330 "DNA damage response, signal
transduction by p53 class mediator" evidence=ISO] [GO:0044325 "ion
channel binding" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:894652 GO:GO:0005634 GO:GO:0044325
GO:GO:0006281 GO:GO:0006914 GO:GO:0010506 GO:GO:0045111
GO:GO:0006511 EMBL:CH466525 GO:GO:0005769 GO:GO:0004197
InterPro:IPR009818 Pfam:PF07145 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0002039 GO:GO:0030330 KO:K11841 MEROPS:C19.018
HOVERGEN:HBG059823 CTD:9100 GeneTree:ENSGT00550000074994
OMA:GQEYQRI ChiTaRS:USP10 EMBL:D84096 EMBL:AK129083 EMBL:AK153675
EMBL:AK157970 EMBL:AK165156 EMBL:AK172443 EMBL:BC007134
IPI:IPI00420601 IPI:IPI00955687 RefSeq:NP_033488.1
UniGene:Mm.256910 UniGene:Mm.421337 ProteinModelPortal:P52479
SMR:P52479 STRING:P52479 PhosphoSite:P52479 PRIDE:P52479
DNASU:22224 Ensembl:ENSMUST00000108988 Ensembl:ENSMUST00000144458
GeneID:22224 KEGG:mmu:22224 UCSC:uc009nqn.1 UCSC:uc009nqo.1
InParanoid:Q6ZQG9 NextBio:302247 Bgee:P52479 CleanEx:MM_USP10
Genevestigator:P52479 GermOnline:ENSMUSG00000031826 Uniprot:P52479
Length = 792
Score = 299 (110.3 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L
Sbjct: 449 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV---- 504
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E
Sbjct: 505 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELE 564
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F
Sbjct: 565 DTGKGSEDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFT 624
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 625 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 662
Score = 199 (75.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 60/179 (33%), Positives = 97/179 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAEEDEWETVG 352
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E++E E G
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLI---EDEELEDTG 567
Score = 45 (20.9 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 15/55 (27%), Positives = 23/55 (41%)
Query: 7 FVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGS----LNFGTE 57
++FG F+ +E + + S P S AED EL G + FG +
Sbjct: 8 YIFGDFSPDEFNQFFVTPRSSVELPPYSGTLCSIQAED-ELPDGQEHQRIEFGVD 61
>UNIPROTKB|F1PEV7 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0045111 "intermediate
filament cytoskeleton" evidence=IEA] [GO:0044325 "ion channel
binding" evidence=IEA] [GO:0030330 "DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0010506 "regulation of
autophagy" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005634 GO:GO:0010506 GO:GO:0045111 GO:GO:0006511
GO:GO:0005769 GO:GO:0004197 InterPro:IPR009818 Pfam:PF07145
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0030330
GeneTree:ENSGT00550000074994 OMA:GQEYQRI EMBL:AAEX03004017
Ensembl:ENSCAFT00000031734 Uniprot:F1PEV7
Length = 799
Score = 301 (111.0 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 76/218 (34%), Positives = 122/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L
Sbjct: 456 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV---- 511
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ +
Sbjct: 512 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTISNGPKSHSVTEDDQE 571
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 572 EPGEGSEDEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 631
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 632 LQLDIQSDRIRTVQDALESLVARESVQGYTTKTKQEVE 669
Score = 195 (73.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 59/176 (33%), Positives = 96/176 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 407 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 462
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L + +S+S
Sbjct: 463 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 518
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDEWE 349
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + S+ E+D+ E
Sbjct: 519 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTISNGPKSH--SVTEDDQEE 572
>UNIPROTKB|A5PJS6 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9913 "Bos taurus" [GO:0030330 "DNA damage response, signal
transduction by p53 class mediator" evidence=ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0010506
"regulation of autophagy" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0002039 "p53 binding"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0044325 "ion
channel binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005769 "early endosome" evidence=ISS]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005634 GO:GO:0044325 GO:GO:0006281 GO:GO:0006914
GO:GO:0010506 GO:GO:0045111 GO:GO:0006511 GO:GO:0005769
GO:GO:0004197 InterPro:IPR009818 Pfam:PF07145 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GO:GO:0002039 GO:GO:0030330
eggNOG:COG5533 KO:K11841 HOVERGEN:HBG059823 CTD:9100 EMBL:BC142223
IPI:IPI00714006 RefSeq:NP_001092394.1 UniGene:Bt.27346
ProteinModelPortal:A5PJS6 STRING:A5PJS6 Ensembl:ENSBTAT00000012432
GeneID:510164 KEGG:bta:510164 GeneTree:ENSGT00550000074994
HOGENOM:HOG000285959 InParanoid:A5PJS6 OMA:GQEYQRI
OrthoDB:EOG4FN4H7 NextBio:20869309 Uniprot:A5PJS6
Length = 800
Score = 301 (111.0 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 76/218 (34%), Positives = 121/218 (55%)
Query: 239 PKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPD 293
P P + +FV +++F ++ + V DI G F P+ +L
Sbjct: 457 PCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV---- 512
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ-------GESTSINGANTALVSLAE-- 344
+ +S+S + RQEDA+E+L FI++ +H+E+L L+ + T NG + V+ E
Sbjct: 513 IKSSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQE 572
Query: 345 ------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF
Sbjct: 573 EPGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFT 632
Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
L LDI S+ + T++DAL A E+++GY T + V+
Sbjct: 633 LQLDIQSDKIRTVQDALESLVARESVQGYTTKTRQEVE 670
Score = 193 (73.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 51/146 (34%), Positives = 83/146 (56%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L + +S+S
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ 326
+ RQEDA+E+L FI++ +H+E+L L+
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLK 545
Score = 38 (18.4 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 103 GAVGCPKENGHIKNSTNGPALSNGV 127
G G P + N GPA+SN V
Sbjct: 166 GGEGGPSAEALV-NGHAGPAVSNSV 189
>FB|FBgn0052479 [details] [associations]
symbol:CG32479 species:7227 "Drosophila melanogaster"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014296 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5533 KO:K11841 GeneTree:ENSGT00550000074994
EMBL:AY122170 RefSeq:NP_728554.1 UniGene:Dm.31128 SMR:Q9W0L7
MINT:MINT-811326 MEROPS:C19.A49 EnsemblMetazoa:FBtr0072589
EnsemblMetazoa:FBtr0333267 GeneID:38103 KEGG:dme:Dmel_CG32479
UCSC:CG32479-RA FlyBase:FBgn0052479 InParanoid:Q9W0L7 OMA:NDSREEH
OrthoDB:EOG4STQKS ChiTaRS:CG32479 GenomeRNAi:38103 NextBio:807015
Uniprot:Q9W0L7
Length = 1517
Score = 290 (107.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 82/253 (32%), Positives = 135/253 (53%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
L PRGL N N C++N+ LQAL+ CSPF LL+ + + + + PT+ A + F+++F
Sbjct: 1107 LRPRGLTNRSNYCYINSILQALLGCSPFYNLLRSIPKQAAVLSEVKTPTVNAMMSFMTNF 1166
Query: 257 DT-PSGGSSKKKNISV------LD--IGRPFSPSM-FEA--VLKNFTPDVPNSISGRPRQ 304
+ PSG + N++ D +G M FE + K + + GR Q
Sbjct: 1167 SSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPTEIYKLWNDSREEHVEGR--Q 1224
Query: 305 EDAQEFLSFIMDQMHDELL---KLQGEST-SINGANTALVSLAEEDEWETV-GPKNKSAV 359
EDA+EFL +++++++DE+L KL + T NG A D W+ + +NK +V
Sbjct: 1225 EDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGG-DVWQMICNNRNKGSV 1283
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
TR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E ++++AL +
Sbjct: 1284 TRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVKEALEILV 1341
Query: 420 APENLEGYRTSST 432
+ LEG S T
Sbjct: 1342 GRDQLEGVTGSKT 1354
>UNIPROTKB|H3BNA1 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394 Pfam:PF00443
GO:GO:0006511 GO:GO:0004221 EMBL:AC009116 EMBL:AC025280
HGNC:HGNC:12608 ChiTaRS:USP10 Ensembl:ENST00000570053 Bgee:H3BNA1
Uniprot:H3BNA1
Length = 150
Score = 240 (89.5 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 61/144 (42%), Positives = 85/144 (59%)
Query: 278 FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTS 331
FSP F TP +S+ GR QEDA+E+L FI++ +H+E+L L+ E +
Sbjct: 13 FSPDEFNQFF--VTPR--SSVEGR--QEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLT 66
Query: 332 I-NGANTALVSLAE--------EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
I NG V+ E EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV
Sbjct: 67 ISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVV 126
Query: 383 KAQGNKASATVQPFLLLHLDIYSE 406
Q +K SAT+QPF L LDI S+
Sbjct: 127 YQQSSKESATLQPFFTLQLDIQSD 150
>POMBASE|SPBP8B7.21 [details] [associations]
symbol:ubp3 "ubiquitin C-terminal hydrolase Ubp3"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IDA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PomBase:SPBP8B7.21 GO:GO:0005829 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006511 GO:GO:0060628
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 KO:K11841
PIR:T40815 RefSeq:NP_596528.1 ProteinModelPortal:O94269
STRING:O94269 MEROPS:C19.A57 EnsemblFungi:SPBP8B7.21.1
GeneID:2541378 KEGG:spo:SPBP8B7.21 OMA:INTGNIC OrthoDB:EOG4TJ035
NextBio:20802487 Uniprot:O94269
Length = 512
Score = 252 (93.8 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 87/302 (28%), Positives = 140/302 (46%)
Query: 151 SPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNL 210
SP+ K H + + + NSS+ E +++ P + + PRG IN+GN+
Sbjct: 89 SPVKKSHSV---PVPSDRSEKKSFNSSLGELIETYSPSLDAP----RPIQPRGFINTGNI 141
Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 270
CF+N+ LQALM C PF LL+++ R +P + T + ++ S+K ++
Sbjct: 142 CFMNSILQALMYCVPFYNLLKQIN-RMVPY-NFERTTPLIESLTMLSRDFREYSEKFDLQ 199
Query: 271 VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--QEDAQEFLS-----FIMDQMHDELL 323
G P + + K P +G +E FL F+ ++ H LL
Sbjct: 200 ----GDSILPEVVYSATKG-NPRFEMLQTGEQEDAEEFLNLFLDELHEEFVRERRH-YLL 253
Query: 324 KL--QGESTSI---NGANTALVSLAEEDE-----WETVGPKNKSAVTRTQSFLPSALSDI 373
K + + I NG + L S ++ W VG K + R+ + S +S I
Sbjct: 254 KNDERNPKSDIKISNGIKSGLDSFDDQSSVEASGWTEVGKNKKPVIARSATVERSPISQI 313
Query: 374 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
FGGQL+S ++ + S ++PF L LDI +E +H++ DAL +APE L + SS G
Sbjct: 314 FGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTAPEILPEWH-SSKG 372
Query: 434 NV 435
NV
Sbjct: 373 NV 374
>SGD|S000000953 [details] [associations]
symbol:UBP3 "Ubiquitin-specific protease involved in
transport and osmotic response" species:4932 "Saccharomyces
cerevisiae" [GO:0004843 "ubiquitin-specific protease activity"
evidence=IDA] [GO:0034517 "ribophagy" evidence=IMP] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IMP;IDA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IC] [GO:0047484 "regulation of response to osmotic stress"
evidence=IMP;IPI] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SGD:S000000953 GO:GO:0005737
GO:GO:0003729 EMBL:BK006939 GO:GO:0006511 GO:GO:0060628
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 EMBL:U18917
RefSeq:NP_011082.3 GeneID:856899 KEGG:sce:YER155C PDB:2QIY
PDBsum:2QIY GO:GO:0034517 eggNOG:COG5533 GO:GO:0047484
RefSeq:NP_011078.3 GeneID:856895 KEGG:sce:YER151C KO:K11841
GeneTree:ENSGT00550000074994 OrthoDB:EOG4TJ035 EMBL:M94917
PIR:B44450 ProteinModelPortal:Q01477 SMR:Q01477 DIP:DIP-4255N
IntAct:Q01477 MINT:MINT-527025 STRING:Q01477 MEROPS:C19.004
PaxDb:Q01477 PeptideAtlas:Q01477 EnsemblFungi:YER151C CYGD:YER151c
HOGENOM:HOG000141876 OMA:ANICFMS EvolutionaryTrace:Q01477
NextBio:983307 Genevestigator:Q01477 GermOnline:YER151C
Uniprot:Q01477
Length = 912
Score = 146 (56.5 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 344 EEDEWETV------GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQP 395
EE+ W V G K K+A RT +PS +S +FGGQ +SV+ NK S T+ P
Sbjct: 665 EENGWHEVSGSSKRGKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDP 724
Query: 396 FLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
F + LDI V+ +E A + FS E L +++SS +V+
Sbjct: 725 FQTIQLDISDAGVNDLETAFKKFSEYELLP-FKSSSGNDVE 764
Score = 116 (45.9 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD 237
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRN 495
Score = 80 (33.2 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
SSK K+ P F L P + G QEDA+EFL+ ++DQ+H+EL
Sbjct: 545 SSKSKSFQHCATADAVKPDEFYKTLSTI-PKFKDLQWGH--QEDAEEFLTHLLDQLHEEL 601
Query: 323 LKLQGESTSINGANTALVSLAEE 345
+ T N L S+ +E
Sbjct: 602 ISAIDGLTD-NEIQNMLQSINDE 623
Score = 39 (18.8 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 96 ASNDHDLGAVGCPKENGHIKNSTNG 120
+S H + PK N +K T+G
Sbjct: 247 SSAHHHTKSHSIPKHNEEVKTETHG 271
Score = 39 (18.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
T +G SS N++ IG+ SP + + K VP S G
Sbjct: 381 TTAGVSST--NMAAATIGKSSSPLLSKQPQKKDKKYVPPSTKG 421
>UNIPROTKB|J3KT19 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 EMBL:AC009116 EMBL:AC025280
HGNC:HGNC:12608 ChiTaRS:USP10 Ensembl:ENST00000569038
Uniprot:J3KT19
Length = 208
Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 31 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 86
Query: 246 LTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F ++ + V DI G F P+ +L T + +S+S
Sbjct: 87 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLL---TVN-KSSLSE 142
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDE 347
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E++E
Sbjct: 143 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEE 196
>UNIPROTKB|H3BVF1 [details] [associations]
symbol:USP10 "Ubiquitin carboxyl-terminal hydrolase 10"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 GO:GO:0006511
GO:GO:0004221 EMBL:AC009116 EMBL:AC025280 HGNC:HGNC:12608
ChiTaRS:USP10 Ensembl:ENST00000563892 Bgee:H3BVF1 Uniprot:H3BVF1
Length = 158
Score = 124 (48.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 59 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 114
Query: 246 LTAFVGFVSDF 256
+ +FV +++F
Sbjct: 115 IDSFVRLMNEF 125
Score = 37 (18.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 4 SKLFVFGSFTEEETRSWLQSQSSGSVKKP 32
S ++FG F+ +E + + S SV+ P
Sbjct: 5 SPQYIFGDFSPDEFNQFFVTPRS-SVELP 32
>POMBASE|SPBC18H10.08c [details] [associations]
symbol:ubp4 "ubiquitin C-terminal hydrolase Ubp4"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0032153 "cell division site"
evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PomBase:SPBC18H10.08c GO:GO:0032153 GO:GO:0005768 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006511 GO:GO:0030133 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 PIR:T39772
RefSeq:NP_595732.2 STRING:O60139 MEROPS:C19.A58
EnsemblFungi:SPBC18H10.08c.1 GeneID:2540837 OrthoDB:EOG4HX88F
NextBio:20801954 Uniprot:O60139
Length = 593
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 70/244 (28%), Positives = 109/244 (44%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 247
S ++ P GL N GN C++N LQ L +C P +Q LLQ + T++ G +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279
Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIG-RPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
AF + +L+ G R SP F ++++ D SI G Q D
Sbjct: 280 AFFSLLQSV--------------LLNHGQRSISPRNFLEIVQSLNRDF--SIDG---QCD 320
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
AQEFL+F +D++H++L + I +S EE + R+
Sbjct: 321 AQEFLNFFLDKLHEDL-NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHLRSNK-- 377
Query: 367 PSALSDIFGGQLKSVVKAQG-NKASATVQPF--LLLHLDIYSEAVHTIEDALRLFSAPEN 423
S + + F GQL S + + S T PF L + +D S V ++++ L FSAPE
Sbjct: 378 -SIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV-SLQECLLKFSAPEL 435
Query: 424 LEGY 427
L+G+
Sbjct: 436 LQGH 439
>UNIPROTKB|E2RGE7 [details] [associations]
symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0019784 "NEDD8-specific
protease activity" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
GO:GO:0019784 CTD:27005 KO:K11833 OMA:NVQPRVG
GeneTree:ENSGT00670000098024 EMBL:AAEX03018447 EMBL:AAEX03018448
RefSeq:XP_536136.3 ProteinModelPortal:E2RGE7
Ensembl:ENSCAFT00000020298 GeneID:478979 KEGG:cfa:478979
NextBio:20854234 Uniprot:E2RGE7
Length = 565
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 74/238 (31%), Positives = 104/238 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I ++ A +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILASSPAPAQPRRGGALLEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELE 430
>UNIPROTKB|O57429 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
SMR:O57429 Uniprot:O57429
Length = 357
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 72/233 (30%), Positives = 103/233 (44%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ RD+ TA + S+F
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMR-TALM---SEF----- 70
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I +L P SPS F+ ++ + P G Q+DAQEFL F++D +
Sbjct: 71 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAP----RFVGY-NQQDAQEFLRFLLDGL 121
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171
Query: 379 KSVVK-AQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDG 222
>UNIPROTKB|F1MH36 [details] [associations]
symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0019784 "NEDD8-specific protease
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
GO:GO:0019784 IPI:IPI00715496 UniGene:Bt.24990 OMA:NVQPRVG
GeneTree:ENSGT00670000098024 EMBL:DAAA02006959
Ensembl:ENSBTAT00000029184 Uniprot:F1MH36
Length = 565
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 74/238 (31%), Positives = 104/238 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I ++ A +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELE 430
>UNIPROTKB|Q9UK80 [details] [associations]
symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS;IDA;TAS] [GO:0006464 "cellular
protein modification process" evidence=NAS] [GO:0008234
"cysteine-type peptidase activity" evidence=ISS;IMP] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0016578
"histone deubiquitination" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0019784 "NEDD8-specific protease activity" evidence=IDA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
EMBL:CH471121 EMBL:AL590714 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 PDB:2Y5B PDB:3I3T
PDB:3MTN PDBsum:2Y5B PDBsum:3I3T PDBsum:3MTN MEROPS:C19.034
CTD:27005 HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD
EMBL:AF177758 EMBL:AF233442 EMBL:AK292319 EMBL:AF217979
EMBL:AB208899 EMBL:BC003130 EMBL:BC090946 EMBL:BC136291
IPI:IPI00007262 IPI:IPI00376946 IPI:IPI00873033
RefSeq:NP_001014443.1 RefSeq:NP_036607.3 UniGene:Hs.8015
ProteinModelPortal:Q9UK80 SMR:Q9UK80 IntAct:Q9UK80 STRING:Q9UK80
PhosphoSite:Q9UK80 DMDM:10720334 PRIDE:Q9UK80
Ensembl:ENST00000289865 Ensembl:ENST00000368001
Ensembl:ENST00000368002 GeneID:27005 KEGG:hsa:27005 UCSC:uc010pkc.2
GeneCards:GC01P161129 HGNC:HGNC:12620 HPA:HPA028397 MIM:604729
neXtProt:NX_Q9UK80 PharmGKB:PA37246 OMA:NVQPRVG BRENDA:3.1.2.15
EvolutionaryTrace:Q9UK80 GenomeRNAi:27005 NextBio:49506
PMAP-CutDB:Q9UK80 Bgee:Q9UK80 CleanEx:HS_USP21
Genevestigator:Q9UK80 GermOnline:ENSG00000143258 Uniprot:Q9UK80
Length = 565
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/238 (31%), Positives = 104/238 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSI--NGANTALV----SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I NG + +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELE 430
>UNIPROTKB|F1S196 [details] [associations]
symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0019784 "NEDD8-specific protease
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
GO:GO:0019784 KO:K11833 OMA:NVQPRVG GeneTree:ENSGT00670000098024
EMBL:CU463216 RefSeq:XP_001927817.1 UniGene:Ssc.6203
Ensembl:ENSSSCT00000006971 GeneID:100152455 KEGG:ssc:100152455
Uniprot:F1S196
Length = 565
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 74/238 (31%), Positives = 104/238 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I ++ A +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELE 430
>UNIPROTKB|Q2KJ72 [details] [associations]
symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0019784 "NEDD8-specific protease
activity" evidence=ISS] [GO:0008234 "cysteine-type peptidase
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0016578 "histone
deubiquitination" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0019784
eggNOG:COG5533 HOGENOM:HOG000231498 HSSP:P43593 EMBL:BC105488
IPI:IPI00715496 RefSeq:NP_001039841.1 UniGene:Bt.24990
ProteinModelPortal:Q2KJ72 MEROPS:C19.034 GeneID:534273
KEGG:bta:534273 CTD:27005 HOVERGEN:HBG011164 InParanoid:Q2KJ72
KO:K11833 OrthoDB:EOG4229JD NextBio:20876334 Uniprot:Q2KJ72
Length = 565
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 74/238 (31%), Positives = 104/238 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I ++ A +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELE 430
>MGI|MGI:1858178 [details] [associations]
symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
[GO:0048642 "negative regulation of skeletal muscle tissue
development" evidence=ISO] [GO:0048643 "positive regulation of
skeletal muscle tissue development" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
Length = 613
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 72/242 (29%), Positives = 110/242 (45%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A
Sbjct: 269 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTAL 322
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 323 MEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFMGY-NQQDAQE 368
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ + + L L +E++ + K + R S
Sbjct: 369 FLRFLLDGLHNEVNRVAARPKA---SPETLDHLPDEEKGRQMWRKY---LEREDS----R 418
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 419 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDIL 476
Query: 425 EG 426
+G
Sbjct: 477 DG 478
>RGD|621073 [details] [associations]
symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter"
evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
[GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
regulation of skeletal muscle tissue development" evidence=IDA]
[GO:0048643 "positive regulation of skeletal muscle tissue
development" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
Length = 618
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 72/242 (29%), Positives = 110/242 (45%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A
Sbjct: 274 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTAL 327
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 328 MEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 373
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ + +L L +E++ + K + R S
Sbjct: 374 FLRFLLDGLHNEVNRVAARPKP---SPESLDHLPDEEKGRQMWRKY---LEREDS----R 423
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 424 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 481
Query: 425 EG 426
+G
Sbjct: 482 DG 483
>UNIPROTKB|Q5U349 [details] [associations]
symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
Length = 618
Score = 149 (57.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 72/242 (29%), Positives = 110/242 (45%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A
Sbjct: 274 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTAL 327
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 328 MEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 373
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ + +L L +E++ + K + R S
Sbjct: 374 FLRFLLDGLHNEVNRVAARPKP---SPESLDHLPDEEKGRQMWRKY---LEREDS----R 423
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 424 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 481
Query: 425 EG 426
+G
Sbjct: 482 DG 483
>UNIPROTKB|E9PPM2 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
Length = 362
Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 73/242 (30%), Positives = 107/242 (44%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ A
Sbjct: 18 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTAL 71
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
V +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 72 VEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 117
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ S N N L L ++++ + K + R S
Sbjct: 118 FLRFLLDGLHNEVNRVTLRPKS-NPEN--LDHLPDDEKGRQMWRKY---LEREDS----R 167
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 168 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 225
Query: 425 EG 426
+G
Sbjct: 226 DG 227
>UNIPROTKB|Q2KHV7 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0050821 "protein stabilization"
evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
Uniprot:Q2KHV7
Length = 606
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 70/239 (29%), Positives = 102/239 (42%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ + F
Sbjct: 262 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEF 319
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
T S D+ SPS F+ ++ + P G Q+DAQEFL
Sbjct: 320 AKLIQTIWTSSPN-------DV---VSPSEFKTQIQRYAP----RFVGY-NQQDAQEFLR 364
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
F++D +H+E+ ++ S NT + +DE K + + S + D
Sbjct: 365 FLLDGLHNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGD 414
Query: 373 IFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 415 LFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDG 471
>RGD|1588822 [details] [associations]
symbol:Usp21 "ubiquitin specific peptidase 21" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=ISO;ISS]
[GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
[GO:0019784 "NEDD8-specific protease activity" evidence=ISO;ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1588822 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0006351
GO:GO:0003713 GO:GO:0006511 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 CTD:27005
HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD EMBL:BC166443
IPI:IPI00896130 RefSeq:NP_001121110.1 UniGene:Rn.136743
ProteinModelPortal:B2GUX4 PRIDE:B2GUX4 GeneID:688466
KEGG:rno:688466 UCSC:RGD:1588822 NextBio:736555 ArrayExpress:B2GUX4
Genevestigator:B2GUX4 Uniprot:B2GUX4
Length = 565
Score = 147 (56.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 73/238 (30%), Positives = 102/238 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
H E+ + + I + +L EE E N R S + D
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMW-KRYLEREDSKIVD 372
Query: 373 IFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 LFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELE 430
>SGD|S000002476 [details] [associations]
symbol:DOA4 "Ubiquitin isopeptidase" species:4932
"Saccharomyces cerevisiae" [GO:0004843 "ubiquitin-specific protease
activity" evidence=IMP;IDA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=TAS] [GO:0006897 "endocytosis" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IMP] [GO:0004175 "endopeptidase activity"
evidence=IGI;IPI] [GO:0000502 "proteasome complex" evidence=IPI]
[GO:0010995 "free ubiquitin chain depolymerization" evidence=IDA]
[GO:0010992 "ubiquitin homeostasis" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;IMP]
[GO:0043162 "ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0031902
"late endosome membrane" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SGD:S000002476 GO:GO:0005739 GO:GO:0006275
GO:GO:0031902 GO:GO:0005768 GO:GO:0006897 EMBL:BK006938
GO:GO:0004175 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000502 EMBL:Z46796
EMBL:X84162 EMBL:Z49209 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5533 GO:GO:0043162 GO:GO:0010992 RefSeq:NP_010354.3
GeneID:851641 KEGG:sce:YDR069C KO:K11839 RefSeq:NP_010358.3
GeneID:851645 KEGG:sce:YDR073W KO:K11774
GeneTree:ENSGT00670000097591 OrthoDB:EOG4HX88F EMBL:U02518
EMBL:L08070 EMBL:Z74365 PIR:S39344 ProteinModelPortal:P32571
SMR:P32571 DIP:DIP-5298N IntAct:P32571 MINT:MINT-550253
STRING:P32571 MEROPS:C19.005 PaxDb:P32571 EnsemblFungi:YDR069C
CYGD:YDR069c HOGENOM:HOG000248489 OMA:YIVFYER NextBio:969209
Genevestigator:P32571 GermOnline:YDR069C GO:GO:0010995
Uniprot:P32571
Length = 926
Score = 148 (57.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 69/238 (28%), Positives = 106/238 (44%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI---PKAGYPTLTA--FVGFVSDF 256
GL N GN C++N +Q ++ Q+ L + + I K G + A F V
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
SKK IS+ SP F+ + NS+ Q+D QEF F++D
Sbjct: 623 YKEQVDGSKK--ISI-------SPIKFKLACGSV-----NSLFKTASQQDCQEFCQFLLD 668
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLP---SALS 371
+H++L + G+N L L++E E E + + S++ + FL S +
Sbjct: 669 GLHEDLNQC--------GSNPPLKELSQEAEARREKLSLRIASSI-EWERFLTTDFSVIV 719
Query: 372 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVH---TIEDALRLFSAPENLE 425
D+F GQ S +K + + S T QPF +L + I + TIED R F+ ENLE
Sbjct: 720 DLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLE 777
>MGI|MGI:1353665 [details] [associations]
symbol:Usp21 "ubiquitin specific peptidase 21" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO;IDA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IC]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019784
"NEDD8-specific protease activity" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:1353665 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0006351 GO:GO:0003713
GO:GO:0006511 GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GO:GO:0019784 eggNOG:COG5533 HOGENOM:HOG000231498 MEROPS:C19.034
CTD:27005 HOVERGEN:HBG011164 KO:K11833 EMBL:AF177759 EMBL:AK011148
EMBL:BC021903 IPI:IPI00830385 RefSeq:NP_038947.2 UniGene:Mm.27510
ProteinModelPortal:Q9QZL6 SMR:Q9QZL6 STRING:Q9QZL6
PhosphoSite:Q9QZL6 PRIDE:Q9QZL6 Ensembl:ENSMUST00000111306
GeneID:30941 KEGG:mmu:30941 UCSC:uc011wwa.1
GeneTree:ENSGT00670000098024 NextBio:307382 Bgee:Q9QZL6
CleanEx:MM_USP21 Genevestigator:Q9QZL6
GermOnline:ENSMUSG00000053483 Uniprot:Q9QZL6
Length = 566
Score = 145 (56.1 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 73/239 (30%), Positives = 102/239 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P S + N P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 PD--SCEAVN-----------PTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
H E+ + + I + +L EE E N R S +
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMW-KRYLEREDSKIV 372
Query: 372 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLE 425
D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E LE
Sbjct: 373 DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELE 431
>UNIPROTKB|O75604 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
"negative regulation of skeletal muscle tissue development"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
[GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
"positive regulation of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
Length = 605
Score = 145 (56.1 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 73/242 (30%), Positives = 107/242 (44%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ A
Sbjct: 261 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTAL 314
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
V +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 315 VEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 360
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ S N N L L ++++ + K + R S
Sbjct: 361 FLRFLLDGLHNEVNRVTLRPKS-NPEN--LDHLPDDEKGRQMWRKY---LEREDS----R 410
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 411 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 468
Query: 425 EG 426
+G
Sbjct: 469 DG 470
>UNIPROTKB|F1SAF6 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
Length = 396
Score = 142 (55.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 70/242 (28%), Positives = 108/242 (44%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ + +A
Sbjct: 52 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTAL 105
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 106 MEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 151
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ S + L L ++++ + K + R S
Sbjct: 152 FLRFLLDGLHNEVNRVTVRPKS---SPEGLDHLPDDEKGRQMWRKY---LEREDS----R 201
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 202 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 259
Query: 425 EG 426
+G
Sbjct: 260 DG 261
>UNIPROTKB|E2RSX3 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0050821 "protein
stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
NextBio:20893859 Uniprot:E2RSX3
Length = 606
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 71/239 (29%), Positives = 105/239 (43%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ + F
Sbjct: 262 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEF 319
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
T S D+ SPS F+ ++ + P G Q+DAQEFL
Sbjct: 320 AKLIQTIWTSSPN-------DV---VSPSEFKTQIQRYAP----RFVGY-NQQDAQEFLR 364
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
F++D +H+E+ ++ S N N L L ++++ + K + R S + D
Sbjct: 365 FLLDGLHNEVNRVTVRPKS-NPEN--LDHLPDDEKGRQMWRKY---LEREDS----RIGD 414
Query: 373 IFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 415 LFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVLDG 471
>UNIPROTKB|F1NQJ6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
Length = 521
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 70/221 (31%), Positives = 103/221 (46%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFV 250
S L GL N GN CF+NA LQ+L + F +EL R+ AG T T
Sbjct: 151 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 210
Query: 251 GFVSDFDTPSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDA 307
G D + S +K + L G FSP S+F V K +PN S +Q+DA
Sbjct: 211 G---D-NNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPNFSSRGYQQQDA 262
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
EF+ +++D +H L+LQG NG + +++ L E ++ +K + + +
Sbjct: 263 HEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLTASSKCCINGASTVVT 312
Query: 368 SALSDIFGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSE 406
+ IFGG L++ V G + S PFL L LDI S+
Sbjct: 313 A----IFGGILQNEVNCLICGTE-SRKFDPFLDLSLDIPSQ 348
>UNIPROTKB|B4DKA8 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
GO:GO:0006511 GO:GO:0004221 UniGene:Hs.443731 HGNC:HGNC:12631
HOGENOM:HOG000231497 HOVERGEN:HBG012631 ChiTaRS:USP8
InterPro:IPR015063 Pfam:PF08969 EMBL:AC012170 EMBL:AK296480
IPI:IPI00941811 SMR:B4DKA8 STRING:B4DKA8 Ensembl:ENST00000425032
UCSC:uc010ufh.2 Uniprot:B4DKA8
Length = 1012
Score = 128 (50.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 760 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 818
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 819 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 868
Query: 422 ENL 424
E L
Sbjct: 869 EKL 871
Score = 56 (24.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 169 QNAAAC--NSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQAL 220
+N C + IS ++ +N PV GL N GN C++N+ LQ L
Sbjct: 637 ENKPTCYPKAEISRLSASQIRNLN-PVFGGSGPALTGLRNLGNTCYMNSILQCL 689
Score = 50 (22.7 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 28 SVKKPVSSRRAEKPA----EDKELQFGSLNFGTESSLVGTTDEPNGKSVVDGPVVFQPST 83
S+K R +KPA E+ ++ S N +S G P+ + PVVF P+
Sbjct: 323 SIKNVPQIDRTKKPAVKLPEEHRIKSESTNHEQQSPQSGKVI-PDRSTK---PVVFSPTL 378
Query: 84 LLKKDDKVK 92
+L ++K +
Sbjct: 379 MLTDEEKAR 387
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 14 EEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKE 46
E+E R Q + ++K ++A+K E +E
Sbjct: 402 EKELRERQQEEQKEKLRKEEQEQKAKKKQEAEE 434
>UNIPROTKB|I3LI16 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
Uniprot:I3LI16
Length = 606
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 70/242 (28%), Positives = 108/242 (44%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L GL N GN CF+N+ LQ L + LQ L RD+ + +A
Sbjct: 262 KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTAL 315
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
+ +F K I + P SPS F+ ++ + P G Q+DAQE
Sbjct: 316 MEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAP----RFVGY-NQQDAQE 361
Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
FL F++D +H+E+ ++ S + L L ++++ + K + R S
Sbjct: 362 FLRFLLDGLHNEVNRVTVRPKS---SPEGLDHLPDDEKGRQMWRKY---LEREDS----R 411
Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS + +TV PF L L I Y E T+ D +RLF+ + L
Sbjct: 412 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 469
Query: 425 EG 426
+G
Sbjct: 470 DG 471
>UNIPROTKB|F1S096 [details] [associations]
symbol:LOC100738199 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042393 "histone binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0016578 "histone deubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00690000102047 EMBL:CU550694
Ensembl:ENSSSCT00000005040 OMA:ATAICAT ArrayExpress:F1S096
Uniprot:F1S096
Length = 291
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 65/211 (30%), Positives = 99/211 (46%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 77 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 132
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 133 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 186
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + S+ +E+ T+ NK + + + + I
Sbjct: 187 DHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGASTVVTAIFGGILQ 236
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 237 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 264
>UNIPROTKB|P40818 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase 8"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0019897 "extrinsic to
plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0000281 "cytokinesis after mitosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=IMP] [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 GO:GO:0007265 GO:GO:0008283
GO:GO:0019897 GO:GO:0010008 Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000281
GO:GO:0006511 GO:GO:0030496 GO:GO:0007032 GO:GO:0005769
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004843
GO:GO:0004221 eggNOG:COG5533 PDB:2GWF PDBsum:2GWF KO:K11839
PDB:3N3K PDBsum:3N3K BRENDA:3.1.2.15 EMBL:D29956 EMBL:BX537420
EMBL:BC038801 EMBL:BC051345 EMBL:BC110590 IPI:IPI00030915
RefSeq:NP_001122082.1 RefSeq:NP_001122083.1 RefSeq:NP_005145.3
UniGene:Hs.443731 PDB:1WHB PDB:2A9U PDB:2GFO PDBsum:1WHB
PDBsum:2A9U PDBsum:2GFO ProteinModelPortal:P40818 SMR:P40818
DIP:DIP-40365N IntAct:P40818 MINT:MINT-244406 STRING:P40818
MEROPS:C19.011 PhosphoSite:P40818 DMDM:731046 PaxDb:P40818
PeptideAtlas:P40818 PRIDE:P40818 Ensembl:ENST00000307179
Ensembl:ENST00000396444 Ensembl:ENST00000433963 GeneID:9101
KEGG:hsa:9101 UCSC:uc001zyl.4 CTD:9101 GeneCards:GC15P050716
H-InvDB:HIX0172812 HGNC:HGNC:12631 HPA:HPA004869 MIM:603158
neXtProt:NX_P40818 PharmGKB:PA37256 HOGENOM:HOG000231497
HOVERGEN:HBG012631 InParanoid:P40818 OMA:KINDQFA OrthoDB:EOG4XKV6B
PhylomeDB:P40818 ChiTaRS:USP8 EvolutionaryTrace:P40818
GenomeRNAi:9101 NextBio:34117 ArrayExpress:P40818 Bgee:P40818
CleanEx:HS_USP8 Genevestigator:P40818 GermOnline:ENSG00000138592
InterPro:IPR015063 Pfam:PF08969 Uniprot:P40818
Length = 1118
Score = 128 (50.1 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 866 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 924
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 925 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 974
Query: 422 ENL 424
E L
Sbjct: 975 EKL 977
Score = 56 (24.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 169 QNAAAC--NSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQAL 220
+N C + IS ++ +N PV GL N GN C++N+ LQ L
Sbjct: 743 ENKPTCYPKAEISRLSASQIRNLN-PVFGGSGPALTGLRNLGNTCYMNSILQCL 795
Score = 50 (22.7 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 28 SVKKPVSSRRAEKPA----EDKELQFGSLNFGTESSLVGTTDEPNGKSVVDGPVVFQPST 83
S+K R +KPA E+ ++ S N +S G P+ + PVVF P+
Sbjct: 400 SIKNVPQIDRTKKPAVKLPEEHRIKSESTNHEQQSPQSGKVI-PDRSTK---PVVFSPTL 455
Query: 84 LLKKDDKVK 92
+L ++K +
Sbjct: 456 MLTDEEKAR 464
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 14 EEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKE 46
E+E R Q + ++K ++A+K E +E
Sbjct: 479 EKELRERQQEEQKEKLRKEEQEQKAKKKQEAEE 511
>ZFIN|ZDB-GENE-040426-1219 [details] [associations]
symbol:usp20 "ubiquitin specific protease 20"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS] [GO:0021551
"central nervous system morphogenesis" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-040426-1219
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 GO:GO:0021551
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:BX927184
IPI:IPI00920034 Ensembl:ENSDART00000006021 ArrayExpress:F1QTS8
Bgee:F1QTS8 Uniprot:F1QTS8
Length = 913
Score = 101 (40.6 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 182 KEVPMKAINEP-VKSVKD-LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +S +D L PRGL N GN C++NA LQAL +C P Q Q+
Sbjct: 123 KAVPIAVADEEGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFQD 178
Score = 69 (29.3 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 232 QQDTQEFLRCLMDQLHEEL 250
Score = 61 (26.5 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI 403
S + QS S +SDIF G + S+V+ ++ S TV+ F L L I
Sbjct: 432 STKKKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPI 479
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(4) = 3.0e-06
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 410 TIEDALRLFSAPENLEG 426
T+ED L F A + L+G
Sbjct: 538 TLEDCLAAFFAADELKG 554
>ZFIN|ZDB-GENE-041212-59 [details] [associations]
symbol:usp2a "ubiquitin specific peptidase 2a"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
Uniprot:E7FEC1
Length = 600
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 65/237 (27%), Positives = 103/237 (43%)
Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGF 252
KS + L+ GL N GN CF+N+ LQ L + L RD+ T TA +
Sbjct: 262 KSAQGLV--GLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNR-THTALMEE 318
Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
+ SS + +S PS F+ ++ + P G Q+DAQEFL
Sbjct: 319 FAKLIQTMWTSSSSEAVS---------PSEFKTQIQRYAP----RFVGY-NQQDAQEFLR 364
Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
F++D +H+E+ ++ + G L +E++ G K S + S + D
Sbjct: 365 FLLDGLHNEVNRV---TVRPRGNTEDFDHLPDEEK----GKKMWSKYLERED---SKIVD 414
Query: 373 IFGGQLKSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPENLEG 426
+F GQLKS + ++ S PF L L I + + D +RLF+ + L+G
Sbjct: 415 LFVGQLKSSLTCSECGYCSTVFDPFWDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDG 471
>RGD|1308852 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
"Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
evidence=ISO] [GO:0031647 "regulation of protein stability"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
Genevestigator:Q4JL29 Uniprot:Q4JL29
Length = 520
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 66/211 (31%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---DSNV 216
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G RQ+DA EF+ +++
Sbjct: 217 -SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-RQQDAHEFMRYLL 269
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 270 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSANNKCCINGASTVVTTIFGGILQ 319
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 320 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 347
>UNIPROTKB|F1PD56 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
of G-protein coupled receptor protein signaling pathway"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
Uniprot:F1PD56
Length = 915
Score = 98 (39.6 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 72 (30.4 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET 350
Q+D QEFL +MDQ+H+EL + + A ALV + D +T
Sbjct: 229 QQDTQEFLCCLMDQLHEELKE------PVVAAAAALVETRDSDSSDT 269
Score = 61 (26.5 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S +SDIF G + S+V+ ++ S TV+ F L L I + ED RL SA
Sbjct: 444 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK-----EDLARLHSA 492
>ASPGD|ASPL0000072219 [details] [associations]
symbol:AN11102 species:162425 "Emericella nidulans"
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] InterPro:IPR000626
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 SMART:SM00213
GO:GO:0008234 GO:GO:0006511 EMBL:BN001303 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004221 OMA:YGPRRIE
EnsemblFungi:CADANIAT00006373 Uniprot:C8VA49
Length = 572
Score = 137 (53.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 66/232 (28%), Positives = 95/232 (40%)
Query: 149 NPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSG 208
N P F ++ G G DQ A A K + E K+ +P GL N G
Sbjct: 62 NAKPNQTFMMM--GTPSG-DQGAGALTRPKEVVKFLEDMTEAEAAKAA-GAIPAGLQNLG 117
Query: 209 NLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAG-YPTLTAFV--GFVSDFDTPSGGSS 264
N C+LN+TLQ L S + LQ R +R+I A L+ F G + D S
Sbjct: 118 NTCYLNSTLQTLRSVPELHEELQRYRPSRNISGASNLSNLSDFGLGGLGASMDLTSALRD 177
Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRP-RQEDAQEFLSFIMDQMHDEL 322
K +S G F P +F L+N P +G Q+DA+E S I+ Q+ +L
Sbjct: 178 LFKQMSETQEG--FPPILFLNALRNVFPQFAQQDRNGHGYAQQDAEEAWSQIVSQLRQKL 235
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ GE S + V +E+V ++ A P+ SD+F
Sbjct: 236 VIKDGEGES--ATEVSFVEKYMGGRFESVTECDEPAAKEAGE-QPNKTSDVF 284
>RGD|1562061 [details] [associations]
symbol:Usp17l5 "ubiquitin specific peptidase 17-like 5"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
Ensembl:ENSRNOT00000023213 Uniprot:F1M413
Length = 504
Score = 81 (33.6 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLF 418
+ T S S + DIFGGQ++S +K + + + PFL L LDI S +++ AL
Sbjct: 156 SETTSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDL 213
Query: 419 SAPENLEG 426
E L+G
Sbjct: 214 VKVEELQG 221
Score = 74 (31.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK--LQGESTS 331
++ S + RQEDA EFL F ++ MH+ L+ Q E+TS
Sbjct: 120 EILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTS 160
Score = 67 (28.6 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 28/91 (30%), Positives = 38/91 (41%)
Query: 186 MKAINEPVKSVKDLL-P-RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY 243
+ A +P S++ L P GL N GN C+LNA LQ L P + L + Y
Sbjct: 33 LSAKGKPSLSLQRLQRPGSGLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCY 90
Query: 244 P---TLTAFVGFVSD--FDTPSGGSSKKKNI 269
P + A V+ + SGG K I
Sbjct: 91 PEGCNMCAMEAHVTQSLLHSHSGGVMKPSEI 121
>RGD|1565607 [details] [associations]
symbol:RGD1565607 "similar to mouse deubiquitinating enzyme 6"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
Ensembl:ENSRNOT00000023213 Uniprot:F1M413
Length = 504
Score = 81 (33.6 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLF 418
+ T S S + DIFGGQ++S +K + + + PFL L LDI S +++ AL
Sbjct: 156 SETTSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDL 213
Query: 419 SAPENLEG 426
E L+G
Sbjct: 214 VKVEELQG 221
Score = 74 (31.1 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK--LQGESTS 331
++ S + RQEDA EFL F ++ MH+ L+ Q E+TS
Sbjct: 120 EILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTS 160
Score = 67 (28.6 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 28/91 (30%), Positives = 38/91 (41%)
Query: 186 MKAINEPVKSVKDLL-P-RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY 243
+ A +P S++ L P GL N GN C+LNA LQ L P + L + Y
Sbjct: 33 LSAKGKPSLSLQRLQRPGSGLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCY 90
Query: 244 P---TLTAFVGFVSD--FDTPSGGSSKKKNI 269
P + A V+ + SGG K I
Sbjct: 91 PEGCNMCAMEAHVTQSLLHSHSGGVMKPSEI 121
>UNIPROTKB|Q5R5Z6 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
Uniprot:Q5R5Z6
Length = 913
Score = 98 (39.6 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 119 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 174
Score = 69 (29.3 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 228 QQDTQEFLRCLMDQLHEEL 246
Score = 62 (26.9 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S +SDIF G + S+V+ ++ SATV+ F L L I + ED +L SA
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPIPGK-----EDLAKLHSA 490
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VHTIEDALRLFSAPENLEG 426
V T+ED L F A + L+G
Sbjct: 535 VVTLEDCLAAFFAADELKG 553
>UNIPROTKB|H0YLB7 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
ProteinModelPortal:H0YLB7 SMR:H0YLB7 Ensembl:ENST00000559711
Bgee:H0YLB7 Uniprot:H0YLB7
Length = 431
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 71 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 126
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 127 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 180
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 181 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 230
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 231 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 258
>UNIPROTKB|H0YKU8 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008270 GO:GO:0008234
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
Ensembl:ENST00000559257 Uniprot:H0YKU8
Length = 443
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 83 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 138
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 139 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 192
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 193 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 242
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 243 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 270
>UNIPROTKB|F1N0I6 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
Length = 521
Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 58/207 (28%), Positives = 94/207 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ+L + F +EL ++ + + S
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGENNVSLV 220
Query: 263 SSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+K + L G FSP S+F V K +PN G +Q+DA EF+ +++D +H
Sbjct: 221 EEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLLDHLH 274
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L+LQG NG + + S+ +E+ T+ NK + + + + I ++
Sbjct: 275 ---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGASTVVTAIFGGILQNEVN 324
Query: 380 SVVKAQGNKASATVQPFLLLHLDIYSE 406
++ G + S PFL L LDI S+
Sbjct: 325 CLIC--GTE-SRKFDPFLDLSLDIPSQ 348
>UNIPROTKB|I3LBG3 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
[GO:0001664 "G-protein coupled receptor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:CU459043
Ensembl:ENSSSCT00000023659 Uniprot:I3LBG3
Length = 918
Score = 99 (39.9 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 32/96 (33%), Positives = 40/96 (41%)
Query: 142 QNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKD--L 199
Q H P P KF +D C+ K VP+ +E +D L
Sbjct: 94 QRLAAHP-PGPSPKFSEQVALRSSCQDSPPPPCHPL----KAVPIAVADEGESESEDDDL 148
Query: 200 LPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
PRGL N GN C++NA LQAL +C P Q E
Sbjct: 149 KPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 184
Score = 69 (29.3 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 238 QQDTQEFLRCLMDQLHEEL 256
Score = 60 (26.2 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTI 411
P S + Q + S +SDIF G + S+V+ ++ S TV+ F L L I +
Sbjct: 431 PSTGSRRRKEQQYR-SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK----- 484
Query: 412 EDALRLFSA 420
ED +L SA
Sbjct: 485 EDLAKLHSA 493
>UNIPROTKB|Q6JHV3 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
Length = 498
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 193
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 194 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 247
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 248 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 297
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 298 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 325
>UNIPROTKB|H0YMI4 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
Length = 503
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 143 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 198
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 199 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 252
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 253 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 302
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 303 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 330
>UNIPROTKB|F1P4F0 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
Uniprot:F1P4F0
Length = 903
Score = 98 (39.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 115 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 170
Score = 69 (29.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 224 QQDTQEFLRCLMDQLHEEL 242
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
S +SDIF G + S+V+ ++ S TV+ F L L I + ED +L SA
Sbjct: 430 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK-----EDLAKLHSAIYQTVP 484
Query: 427 YRTSSTGN 434
+T + G+
Sbjct: 485 AKTGACGD 492
>UNIPROTKB|E2QZQ0 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
evidence=IEA] [GO:0031647 "regulation of protein stability"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
NextBio:20861160 Uniprot:E2QZQ0
Length = 520
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 215
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 269
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 270 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 319
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 320 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 347
>UNIPROTKB|Q9Y6I4 [details] [associations]
symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
[GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
"regulation of protein stability" evidence=IDA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
"ubiquitin-specific protease activity" evidence=TAS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
Length = 520
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---D-NN 215
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 216 VSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 269
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 270 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 319
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 320 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 347
>MGI|MGI:2152450 [details] [associations]
symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
"Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
Uniprot:Q91W36
Length = 520
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 65/211 (30%), Positives = 97/211 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL-TAFVGFVSDFDT 258
GL N GN CF+NA LQ+L + F +EL R+ AG T T G D +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQG---DSNV 216
Query: 259 PSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S +K + L G FSP S+F V K +PN G +Q+DA EF+ +++
Sbjct: 217 -SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKI----MPN-FRGY-QQQDAHEFMRYLL 269
Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
D +H L+LQG NG + + + L E T+ NK + + + + I
Sbjct: 270 DHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGASTVVTAIFGGILQ 319
Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
++ ++ G + S PFL L LDI S+
Sbjct: 320 NEVNCLIC--GTE-SRKFDPFLDLSLDIPSQ 347
>UNIPROTKB|A7Z056 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0071108 "protein
K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
Uniprot:A7Z056
Length = 912
Score = 98 (39.6 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 69 (29.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 229 QQDTQEFLRCLMDQLHEEL 247
Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
+ QS+ S +SDIF G + S+V+ ++ S TV+ F L L I + ED +L S
Sbjct: 435 KEQSYR-SVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGK-----EDLAKLHS 488
Query: 420 A 420
A
Sbjct: 489 A 489
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VHTIEDALRLFSAPENLEG 426
V T+ED L F A + L+G
Sbjct: 534 VVTLEDCLAAFFAADELKG 552
>UNIPROTKB|Q0IIM6 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
[GO:0007265 "Ras protein signal transduction" evidence=IEA]
[GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
eggNOG:COG5533 KO:K11839 GeneTree:ENSGT00670000097591
MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
OMA:KINDQFA OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969
EMBL:DAAA02029069 EMBL:DAAA02029070 EMBL:BC122571 IPI:IPI00697060
RefSeq:NP_001069594.1 UniGene:Bt.9664 SMR:Q0IIM6 STRING:Q0IIM6
Ensembl:ENSBTAT00000033814 GeneID:538743 KEGG:bta:538743
InParanoid:Q0IIM6 NextBio:20877551 Uniprot:Q0IIM6
Length = 1085
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 833 QQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 891
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 892 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 941
Query: 422 ENL 424
E L
Sbjct: 942 EKL 944
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 203 GLINSGNLCFLNATLQAL 220
GL N GN C++N+ LQ L
Sbjct: 745 GLRNLGNTCYMNSILQCL 762
>UNIPROTKB|Q9Y2K6 [details] [associations]
symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
"protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
"regulation of G-protein coupled receptor protein signaling
pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
Ensembl:ENST00000315480 Ensembl:ENST00000358355
Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
Length = 914
Score = 98 (39.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 229 QQDTQEFLRCLMDQLHEEL 247
Score = 58 (25.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
S +SDIF G + S+V+ ++ S TV+ F L L I + ED +L SA
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGK-----EDLAKLHSA 491
Score = 41 (19.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 408 VHTIEDALRLFSAPENLEG 426
V T+ED L F A + L+G
Sbjct: 536 VVTLEDCLAAFFAADELKG 554
>RGD|1304979 [details] [associations]
symbol:Usp8 "ubiquitin specific peptidase 8" species:10116
"Rattus norvegicus" [GO:0000281 "cytokinesis after mitosis"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007032 "endosome organization" evidence=ISO] [GO:0007265 "Ras
protein signal transduction" evidence=ISO] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0019897 "extrinsic to
plasma membrane" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0031313 "extrinsic to endosome membrane" evidence=ISO]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
[GO:0001669 "acrosomal vesicle" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1304979 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 IPI:IPI00782723 Ensembl:ENSRNOT00000057174
UCSC:RGD:1304979 ArrayExpress:D4A7S5 Uniprot:D4A7S5
Length = 416
Score = 93 (37.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 355 NKSAV--TRTQSFLP----SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEA 407
NK V TRT +P S + +F GQ KS V+ +K S T + F+ L L + S +
Sbjct: 199 NKVRVGHTRTGHQIPLQMVSIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTS 258
Query: 408 VHTIEDALRLFSAPENL 424
T++D LRLFS E L
Sbjct: 259 KCTLQDCLRLFSKEEKL 275
Score = 65 (27.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQ 326
Q+D+QE L F+MD +H++L K++
Sbjct: 180 QQDSQELLLFLMDGLHEDLNKVR 202
Score = 55 (24.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 203 GLINSGNLCFLNATLQAL 220
GL N GN C++N+ LQ L
Sbjct: 96 GLRNLGNTCYMNSILQCL 113
>FB|FBgn0031187 [details] [associations]
symbol:CG14619 species:7227 "Drosophila melanogaster"
[GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
[GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IMP]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
InParanoid:Q8IQ27 Uniprot:Q8IQ27
Length = 938
Score = 115 (45.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 44/126 (34%), Positives = 64/126 (50%)
Query: 304 QEDAQEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
Q+DAQEFL F +D +H L ++GE+ +I+ N + A+ WE TR
Sbjct: 697 QQDAQEFLRFFLDSLHSALNSGVKGETLNIDD-NLSDNKKADLT-WEWY--------TRH 746
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
++ S + D+F GQLKS +K GN S T PF L + + S + +E L LF
Sbjct: 747 EN---SLVRDLFVGQLKSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIR 802
Query: 421 PENLEG 426
E L+G
Sbjct: 803 EEVLDG 808
Score = 60 (26.2 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ +Q L + L+ +R + L F + + T
Sbjct: 614 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWT--- 670
Query: 262 GSSKKKNISVLDIGRPFS 279
+ ++ +++ R FS
Sbjct: 671 --ANVHTVTPMELKRAFS 686
Score = 49 (22.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 63 TTDEPNG--KSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNG 120
T++ NG K V ST + K+K + N++ A G NGH N+ N
Sbjct: 153 TSNTSNGVLKYSVRSTTATATSTSTRNYGKLKPL---NNNQTTA-GVAMMNGHTNNNNNN 208
Query: 121 PALSNGVNH 129
S+ +N+
Sbjct: 209 TRNSSNINN 217
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 2 SDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLV 61
S S + V + + S L +GS ++R P ++ + GT S +
Sbjct: 523 SVSTVTVTAAAPNSASDSTLARSGTGSSS---TARSVLPPMTPTSSRYWDRDSGTSRSSI 579
Query: 62 GTTDEPNGKSV 72
GT+ N S+
Sbjct: 580 GTSSALNSSSL 590
>UNIPROTKB|F1RYL9 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
[GO:0007265 "Ras protein signal transduction" evidence=IEA]
[GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
Pfam:PF08969 EMBL:CU469118 EMBL:CU582768 Ensembl:ENSSSCT00000005124
Uniprot:F1RYL9
Length = 1089
Score = 127 (49.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 837 QQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA- 895
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 896 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 945
Query: 422 ENL 424
E L
Sbjct: 946 EKL 948
Score = 55 (24.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 203 GLINSGNLCFLNATLQAL 220
GL N GN C++N+ LQ L
Sbjct: 749 GLRNLGNTCYMNSILQCL 766
Score = 43 (20.2 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 11 SFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFG--TESSLVGTTD-EP 67
+FT L S+ + + +P+ + + ++ + G LN E +D P
Sbjct: 333 NFTYPSLEESLPSKPTAQMSRPIEVNESIELTNNQNERVGPLNIPIPVEPIAASKSDVSP 392
Query: 68 NGKSVVDGPVVFQ------PSTLLKKDDKVKSVGASNDHD 101
+ V +V Q P+ L +D +VKS S DH+
Sbjct: 393 IIQPVPTVKIVPQIDRTKKPAVKLPEDHRVKS--ESTDHE 430
>SGD|S000003733 [details] [associations]
symbol:UBP12 "Ubiquitin-specific protease" species:4932
"Saccharomyces cerevisiae" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS51283 SMART:SM00695 SGD:S000003733 GO:GO:0005634
GO:GO:0005737 EMBL:BK006943 EMBL:X77688 GO:GO:0006511 GO:GO:0004843
GO:GO:0004221 eggNOG:COG5560 KO:K11835 GeneTree:ENSGT00670000097750
OrthoDB:EOG4FR40X EMBL:Z49472 PIR:S46636 RefSeq:NP_012338.1
ProteinModelPortal:P39538 SMR:P39538 DIP:DIP-6312N IntAct:P39538
MINT:MINT-704453 STRING:P39538 MEROPS:C19.103 PaxDb:P39538
PeptideAtlas:P39538 PRIDE:P39538 EnsemblFungi:YJL197W GeneID:853242
KEGG:sce:YJL197W CYGD:YJL197w HOGENOM:HOG000057142 OMA:WYHTFTI
NextBio:973472 Genevestigator:P39538 GermOnline:YJL197W
Uniprot:P39538
Length = 1254
Score = 137 (53.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 50/198 (25%), Positives = 87/198 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C++N+ LQ L+ D P + G+V+ +
Sbjct: 365 GLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL--GYHGYVARAFSDLVQ 422
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ +S++ F PSMF++ + +F NS+ Q+D+QEFL+F++D +H++L
Sbjct: 423 KLFQNRMSIMQRNAAFPPSMFKSTIGHF-----NSMFSGYMQQDSQEFLAFLLDSLHEDL 477
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQLK 379
++ I T SL+ D+ K A + L S ++D+F G K
Sbjct: 478 NRI------IKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFVGMYK 531
Query: 380 SVVKA-QGNKASATVQPF 396
S + + S T P+
Sbjct: 532 STLYCPECQNVSITFDPY 549
Score = 47 (21.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 406 EAVHTIEDALRLFSAPENL 424
E T++D L+LFS PE L
Sbjct: 959 ERTITLDDCLQLFSKPEIL 977
>RGD|1307192 [details] [associations]
symbol:Usp16 "ubiquitin specific peptidase 16" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=ISO;ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO;ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006974 "response to
DNA damage stimulus" evidence=ISO;ISS] [GO:0007067 "mitosis"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=ISO;ISS]
[GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043130
"ubiquitin binding" evidence=ISO;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0045901 "positive regulation of translational elongation"
evidence=ISO;ISS] [GO:0051289 "protein homotetramerization"
evidence=ISO;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1307192
GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006974
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
eggNOG:COG5207 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
KO:K11844 OrthoDB:EOG495ZRD GeneTree:ENSGT00690000102047
OMA:CKNVAEE MEROPS:C19.050 EMBL:CH473989 EMBL:BC112386
IPI:IPI00190797 IPI:IPI00923707 RefSeq:NP_001093971.1
UniGene:Rn.55800 PRIDE:Q2KJ09 Ensembl:ENSRNOT00000002173
GeneID:288306 KEGG:rno:288306 UCSC:RGD:1307192 InParanoid:Q2KJ09
NextBio:627930 Genevestigator:Q2KJ09 Uniprot:Q2KJ09
Length = 826
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 62/231 (26%), Positives = 98/231 (42%)
Query: 182 KEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPK 240
K M N P+ S + +GL N GN CF NA +Q L +LL+E++ + I K
Sbjct: 175 KSESMAKENIPLDSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVK 234
Query: 241 AGYPTLTAFVGFVSDFDTPSG---GSSKKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN 296
P L + + P S+ N + R +P +F V K T
Sbjct: 235 IEPPDLALTEPLEVNLEPPGPLTLAMSQFLNEMQENKKRIVTPKELFSQVCKKAT----- 289
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
G +Q+D+QE L +++D M E + + S G A + E+ + E KNK
Sbjct: 290 RFKGY-QQQDSQELLRYLLDGMRAE----EHQRVS-KGILKAFGNSTEKLDEEV---KNK 340
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE 406
+ +PS + IFGG+L S + + + V + FL L L + +
Sbjct: 341 VKDYEKKKAIPSFVDRIFGGELTSTIMCDDCRTVSLVHESFLDLSLPVLDD 391
>RGD|1588758 [details] [associations]
symbol:LOC689730 "similar to ubiquitin specific peptidase 17
(homolog)" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1588758 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
IPI:IPI00557791 Ensembl:ENSRNOT00000042131 Uniprot:F1LVL3
Length = 523
Score = 82 (33.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYS-EAV-HTIEDALR 416
+ T S S + DIFGGQ++S +K + + + PFL L LDI S ++V +ED ++
Sbjct: 156 SETSSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVK 215
Query: 417 LFSAPENLEG 426
L E L+G
Sbjct: 216 L----EELQG 221
Score = 70 (29.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK--LQGESTS 331
++ S + RQEDA EFL F ++ MH+ L+ Q E++S
Sbjct: 120 EILTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSETSS 160
Score = 65 (27.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 23/72 (31%), Positives = 29/72 (40%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT---LTAFVGFVSD--FD 257
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 109
Query: 258 TPSGGSSKKKNI 269
+ SGG K I
Sbjct: 110 SHSGGVMKPSEI 121
>CGD|CAL0001949 [details] [associations]
symbol:orf19.3815 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 CGD:CAL0001949 GO:GO:0008234 GO:GO:0006511
EMBL:AACQ01000057 EMBL:AACQ01000056 GO:GO:0004221 eggNOG:COG5533
KO:K11871 RefSeq:XP_717220.1 RefSeq:XP_717296.1
ProteinModelPortal:Q5A675 GeneID:3641038 GeneID:3641150
KEGG:cal:CaO19.11296 KEGG:cal:CaO19.3815 Uniprot:Q5A675
Length = 949
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 64/241 (26%), Positives = 102/241 (42%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG-FVS 254
+K+ GL N G+ C++N+T+Q L PF + + + Y + A
Sbjct: 539 LKEYFICGLRNFGSSCYINSTIQLLFGVYPFKSIFNHGYQKYVKDPKYLKILAKPNSHTK 598
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--VPNSISGRPRQEDAQEFLS 312
+ S S + G SP+ F V PD +P+ Q+DAQEFL
Sbjct: 599 ESVLLSEAISGLLRTFQQNGGVSVSPTKFIRVTSLLKPDFNIPHE------QQDAQEFLL 652
Query: 313 FIMDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
F++D++H+EL K Q +++ E++ + KS S S +
Sbjct: 653 FVLDRLHEELADKRQDNYDPELSVQKWRININMENK-DKYMEWCKSLHEHEGS---SPIM 708
Query: 372 DIFGGQLKSVVKAQGNKA---SATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLE 425
D+F G L++ +K NK S + PF +L L I Y V+ + D LR + E L
Sbjct: 709 DLFQGHLQNKLKC--NKCGYESVSYSPFSILSLPIPNNYKNEVN-LSDCLRYYIQDEVLS 765
Query: 426 G 426
G
Sbjct: 766 G 766
>UNIPROTKB|Q5A675 [details] [associations]
symbol:UBP7 "Ubiquitin carboxyl-terminal hydrolase"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 CGD:CAL0001949 GO:GO:0008234 GO:GO:0006511
EMBL:AACQ01000057 EMBL:AACQ01000056 GO:GO:0004221 eggNOG:COG5533
KO:K11871 RefSeq:XP_717220.1 RefSeq:XP_717296.1
ProteinModelPortal:Q5A675 GeneID:3641038 GeneID:3641150
KEGG:cal:CaO19.11296 KEGG:cal:CaO19.3815 Uniprot:Q5A675
Length = 949
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 64/241 (26%), Positives = 102/241 (42%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG-FVS 254
+K+ GL N G+ C++N+T+Q L PF + + + Y + A
Sbjct: 539 LKEYFICGLRNFGSSCYINSTIQLLFGVYPFKSIFNHGYQKYVKDPKYLKILAKPNSHTK 598
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--VPNSISGRPRQEDAQEFLS 312
+ S S + G SP+ F V PD +P+ Q+DAQEFL
Sbjct: 599 ESVLLSEAISGLLRTFQQNGGVSVSPTKFIRVTSLLKPDFNIPHE------QQDAQEFLL 652
Query: 313 FIMDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
F++D++H+EL K Q +++ E++ + KS S S +
Sbjct: 653 FVLDRLHEELADKRQDNYDPELSVQKWRININMENK-DKYMEWCKSLHEHEGS---SPIM 708
Query: 372 DIFGGQLKSVVKAQGNKA---SATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLE 425
D+F G L++ +K NK S + PF +L L I Y V+ + D LR + E L
Sbjct: 709 DLFQGHLQNKLKC--NKCGYESVSYSPFSILSLPIPNNYKNEVN-LSDCLRYYIQDEVLS 765
Query: 426 G 426
G
Sbjct: 766 G 766
>UNIPROTKB|E2RH35 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
GO:GO:0006511 GO:GO:0004221 KO:K11839 GeneTree:ENSGT00670000097591
CTD:9101 OMA:KINDQFA InterPro:IPR015063 Pfam:PF08969
EMBL:AAEX03016119 RefSeq:XP_535474.1 Ensembl:ENSCAFT00000024054
GeneID:478299 KEGG:cfa:478299 Uniprot:E2RH35
Length = 1116
Score = 129 (50.5 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 40/123 (32%), Positives = 58/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 864 QQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 922
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 923 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 972
Query: 422 ENL 424
E L
Sbjct: 973 EKL 975
Score = 55 (24.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 203 GLINSGNLCFLNATLQAL 220
GL N GN C++N+ LQ L
Sbjct: 776 GLRNLGNTCYMNSILQCL 793
Score = 38 (18.4 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 14 EEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQ 48
E+E R Q + +++ ++A K E +E Q
Sbjct: 479 EKELRERQQEEQKEKLRREEQEQKARKKQEAEENQ 513
>UNIPROTKB|B1WBD7 [details] [associations]
symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
G-protein coupled receptor protein signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
GO:GO:0004197 GO:GO:0004221 CTD:10868 HOVERGEN:HBG054196 KO:K11848
EMBL:BC161716 RefSeq:NP_001121345.1 UniGene:Xl.16107
ProteinModelPortal:B1WBD7 SMR:B1WBD7 GeneID:100158436
KEGG:xla:100158436 Xenbase:XB-GENE-966533 Uniprot:B1WBD7
Length = 840
Score = 95 (38.5 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 182 KEVPMKAINEPVKSVKD---LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ A+ + +S D + PRGL N GN C++NA LQAL +C P Q E
Sbjct: 76 KSVPI-AVGDDGESESDEDDIKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE 131
Score = 69 (29.3 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 185 QQDTQEFLRCLMDQLHEEL 203
Score = 54 (24.1 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI 403
S +SDIF G + S+V+ ++ S T++ F L L I
Sbjct: 369 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPI 405
Score = 40 (19.1 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 410 TIEDALRLFSAPENLEG 426
T+ED L F A + L+G
Sbjct: 464 TLEDCLAAFFAADELKG 480
>SGD|S000000946 [details] [associations]
symbol:UBP5 "Putative ubiquitin-specific protease"
species:4932 "Saccharomyces cerevisiae" [GO:0004843
"ubiquitin-specific protease activity" evidence=TAS] [GO:0016579
"protein deubiquitination" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0000131
"incipient cellular bud site" evidence=IDA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005935 "cellular bud neck" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SGD:S000000946 Pfam:PF00581
GO:GO:0005935 EMBL:BK006939 Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0000131 EMBL:U18917
eggNOG:COG5533 KO:K11839 RefSeq:NP_011071.3 GeneID:856887
KEGG:sce:YER144C KO:K03120 RefSeq:NP_011075.3 GeneID:856891
KEGG:sce:YER148W GeneTree:ENSGT00670000097591 OrthoDB:EOG4HX88F
HOGENOM:HOG000248489 EMBL:U10082 PIR:S50277
ProteinModelPortal:P39944 SMR:P39944 DIP:DIP-1716N IntAct:P39944
MINT:MINT-409937 STRING:P39944 MEROPS:C19.006 EnsemblFungi:YER144C
CYGD:YER144c NextBio:983284 Genevestigator:P39944
GermOnline:YER144C Uniprot:P39944
Length = 805
Score = 136 (52.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 67/259 (25%), Positives = 115/259 (44%)
Query: 177 SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---L 233
++S S++ + N V + DL+ GL N GN C++N LQ L+ V++ + L
Sbjct: 425 NLSSSRQTILN--NSQVLDL-DLIV-GLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYL 480
Query: 234 RTRDIPKA-GYPTLTA--FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNF 290
+ + G L A F V++ G+ N+ + P F+ + +
Sbjct: 481 NFINFDSSRGSKGLLAKNFAILVNNMHRH--GAFTPPNVRTI----PVQTIQFKKICGHI 534
Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW-- 348
P +S+ Q+D QEF F++D +H++L + NG+ L L++E+E
Sbjct: 535 NPMYSDSM-----QQDCQEFCQFLLDGLHEDLNQ--------NGSKKHLKQLSDEEERMR 581
Query: 349 ETVGPKNKSAVTRTQSFLP--SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS 405
E + + SA+ + L SA+ D+F GQ S ++ Q S T Q F +L + +
Sbjct: 582 EKMSIRKASALEWERFLLTDFSAIIDLFQGQYASRLQCQVCEHTSTTYQTFSVLSVPVPR 641
Query: 406 EAVHTIEDALRLFSAPENL 424
I D R F+ E L
Sbjct: 642 VKTCNILDCFREFTKCERL 660
Score = 40 (19.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 2 SDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRR 37
+D++L +F + +TR + S SV KP+S +
Sbjct: 230 TDTQLH--NNFQQRQTRILAKILSQNSVIKPLSGTK 263
>UNIPROTKB|A0JM59 [details] [associations]
symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0008277
"regulation of G-protein coupled receptor protein signaling
pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560 CTD:10868
HOVERGEN:HBG054196 KO:K11848 EMBL:BC125749 RefSeq:NP_001090641.1
UniGene:Str.43868 ProteinModelPortal:A0JM59 SMR:A0JM59
GeneID:100036606 KEGG:xtr:100036606 Xenbase:XB-GENE-966528
Uniprot:A0JM59
Length = 884
Score = 95 (38.5 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 182 KEVPMKAINEPVKSVKD---LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ A+ + +S D + PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KSVPI-AVGDDGESESDEDDIKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 69 (29.3 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 229 QQDTQEFLRCLMDQLHEEL 247
Score = 54 (24.1 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI 403
S +SDIF G + S+V+ ++ S T++ F L L I
Sbjct: 413 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPI 449
Score = 40 (19.1 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 410 TIEDALRLFSAPENLEG 426
T+ED L F A + L+G
Sbjct: 508 TLEDCLAAFFAADELKG 524
>UNIPROTKB|E1BF70 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
Uniprot:E1BF70
Length = 421
Score = 89 (36.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 368 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
S + +F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS E L
Sbjct: 223 SIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKL 280
Score = 65 (27.9 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQ 326
Q+D+QE L F+MD +H++L K++
Sbjct: 179 QQDSQELLLFLMDGLHEDLNKVR 201
Score = 55 (24.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 203 GLINSGNLCFLNATLQAL 220
GL N GN C++N+ LQ L
Sbjct: 96 GLRNLGNTCYMNSILQCL 113
>UNIPROTKB|F5GXG2 [details] [associations]
symbol:USP30 "Ubiquitin carboxyl-terminal hydrolase 30"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 GO:GO:0006511
EMBL:AC011596 GO:GO:0004221 HGNC:HGNC:20065 ChiTaRS:USP30
IPI:IPI01014823 ProteinModelPortal:F5GXG2 SMR:F5GXG2
Ensembl:ENST00000539121 ArrayExpress:F5GXG2 Bgee:F5GXG2
Uniprot:F5GXG2
Length = 95
Score = 104 (41.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
I E K K L+P GL+N GN CF+N+ LQ L +C F++ L+E ++
Sbjct: 30 ITERKKRRKGLVP-GLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQ 76
>WB|WBGene00010702 [details] [associations]
symbol:usp-33 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HSSP:Q93009 EMBL:Z79601
GeneTree:ENSGT00690000102047 PIR:T23531 RefSeq:NP_510570.2
ProteinModelPortal:Q93875 SMR:Q93875 MEROPS:C19.A35 PaxDb:Q93875
EnsemblMetazoa:K09A9.4 GeneID:181647 KEGG:cel:CELE_K09A9.4
UCSC:K09A9.4 CTD:181647 WormBase:K09A9.4 HOGENOM:HOG000018261
InParanoid:Q93875 OMA:KRFRHTM NextBio:914812 Uniprot:Q93875
Length = 716
Score = 129 (50.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 98/385 (25%), Positives = 161/385 (41%)
Query: 38 AEKPAEDKELQFGSLNFGTESSLVGT-TD-EPNGKSVVDGPVVFQPSTLLKKDDKVKSVG 95
+ +P+++ E + G L+ + SS GT TD + + + P P + + VK +
Sbjct: 16 SSQPSQNIEKEEGILDEESSSSESGTGTDTDKDDLEENNNPRPMLPKQMESRCKHVKDIN 75
Query: 96 ASNDHDL--GAVGCPKENGHIKNSTNGPALSNGVNHLKADGIDFSSFH--QNAGGHANPS 151
S+ L + C + + S A + +N LK+ +S H + H +P
Sbjct: 76 PSDLSQLLQKKLKCMTCHDSVSFSC---AHQDCINSLKSSCCK-NSDHLLPHMAVHNHP- 130
Query: 152 PISKFH----VLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINS 207
PI +H +LC + ++ S S +V + + + LL G +N
Sbjct: 131 PIL-YHDRKSILCTRCMVYTPVKRFLTHTKFSTSDKVEQETRKMEPLAFRGLL--GYLNF 187
Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
GN C++NA LQ L CSPF Q L EL IP G+ + D P K
Sbjct: 188 GNTCYMNAVLQLLGHCSPFTQYLIEL----IPPGGWSNCS--------HDIP------KT 229
Query: 268 NISV-LDIGRPFS--PSMFEAVLKNFTPDVPNSISGRP--RQEDAQEFLSFIMDQMHDEL 322
I + LD+ +S P + + K T V N + G +Q+DA EF+ ++D + D
Sbjct: 230 AIQMALDLRNMYSDFPLPYLSPWKIITC-VRNEMPGFECFQQQDASEFMRNLLDIL-DRD 287
Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
LK E + NT + E P+ A+ +A+S IF G L++ +
Sbjct: 288 LKTCSE---YHRTNTLI---------EMGNPEMDYAIAMNAPHTKTAISAIFQGVLENQI 335
Query: 383 KAQG-NKASATVQPFLLLHLDIYSE 406
+ S T++ FL L + I E
Sbjct: 336 QCHSCGFRSRTIENFLDLSIPIVGE 360
>UNIPROTKB|J9PAN5 [details] [associations]
symbol:LOC609268 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 InterPro:IPR006861 OMA:EQLMKPE
GeneTree:ENSGT00670000097591 EMBL:AAEX03010544
Ensembl:ENSCAFT00000039099 Uniprot:J9PAN5
Length = 531
Score = 83 (34.3 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 370 LSDIFGGQLKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+ +FGG +S ++ QG S+T++P+L + LDI A H+I AL PE LEG
Sbjct: 194 IQQLFGGYWRSQIQCLHCQG--ISSTLEPYLDISLDI--GAAHSISQALEQLMKPELLEG 249
Score = 68 (29.0 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL 230
GL N GN C++NATLQ L P +
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM 108
Score = 60 (26.2 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELL 323
R +QEDA E+L FI+D M L
Sbjct: 155 RHKQEDAHEYLMFILDAMQQACL 177
>MGI|MGI:1921362 [details] [associations]
symbol:Usp16 "ubiquitin specific peptidase 16" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0043130 "ubiquitin
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045901 "positive
regulation of translational elongation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:1921362
GO:GO:0005634 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006974
GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0042393 GO:GO:0043130 GO:GO:0004197
GO:GO:0004843 GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
eggNOG:COG5207 CTD:10600 HOGENOM:HOG000154755 HOVERGEN:HBG062704
KO:K11844 OrthoDB:EOG495ZRD EMBL:AK160038 EMBL:BC003278
EMBL:BC004577 IPI:IPI00116875 RefSeq:NP_077220.2 UniGene:Mm.152941
ProteinModelPortal:Q99LG0 SMR:Q99LG0 STRING:Q99LG0 MEROPS:C19.050
PhosphoSite:Q99LG0 PaxDb:Q99LG0 PRIDE:Q99LG0 GeneID:74112
KEGG:mmu:74112 UCSC:uc007zuk.2 InParanoid:Q99LG0 NextBio:339808
Genevestigator:Q99LG0 Uniprot:Q99LG0
Length = 825
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 192 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFV 250
P+ S + +GL N GN CF NA +Q L +LL+E++ + I K P L
Sbjct: 185 PMDSASQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTE 244
Query: 251 GFVSDFDTPSGGS-SKKKNISVLDIG--RPFSPS-MFEAVLKNFTPDVPNSISGRPRQED 306
+ + P + + + +S + R +P +F V K T G +Q+D
Sbjct: 245 PLEVNLEPPGPLTLAMSQFLSEMQENKKRVVTPKELFSQVCKKAT-----RFKGY-QQQD 298
Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
+QE L +++D M E + + S G A + E+ + E KNK + +
Sbjct: 299 SQELLRYLLDGMRAE----EHQRVS-KGILKAFGNSTEKLDEEV---KNKVKDYEKKKAI 350
Query: 367 PSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE 406
PS + IFGG+L S + + + V + FL L L + +
Sbjct: 351 PSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDD 391
>WB|WBGene00000874 [details] [associations]
symbol:cyk-3 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
InterPro:IPR011992 Pfam:PF00443 PROSITE:PS50222 PROSITE:PS50235
PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
GO:GO:0009792 GO:GO:0006915 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 EMBL:FO081350
KO:K11837 GeneTree:ENSGT00680000099843 UniGene:Cel.17005
GeneID:175853 KEGG:cel:CELE_ZK328.1 CTD:175853 NextBio:889976
RefSeq:NP_001022992.1 ProteinModelPortal:Q8WT44 SMR:Q8WT44
IntAct:Q8WT44 MINT:MINT-6668483 STRING:Q8WT44 MEROPS:C19.A44
PRIDE:Q8WT44 EnsemblMetazoa:ZK328.1b UCSC:ZK328.1b
WormBase:ZK328.1b HOGENOM:HOG000018770 InParanoid:Q8WT44
OMA:IALANHY ArrayExpress:Q8WT44 Uniprot:Q8WT44
Length = 1178
Score = 129 (50.5 bits), Expect = 0.00012, P = 0.00012
Identities = 73/298 (24%), Positives = 119/298 (39%)
Query: 128 NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMK 187
N L DG + HQ ++K +L + G +S+SG K++
Sbjct: 495 NVLLDDGAQ--NLHQLYSSLGKTKKVNKMKLLLEVRERGTGVWPEELRASLSG-KQITAA 551
Query: 188 AINEPVKSVKDLLPR----GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY 243
+ + D R GL+N GN C+ NA +Q L SP Q + D K G
Sbjct: 552 STLSSNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGN 611
Query: 244 PTLTAFVGFVSDFDT--PSGGSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSIS 299
++ ++KKKNI+ D S MFE
Sbjct: 612 LRRGDAAETTIEYAKLLREMWAAKKKNIAPNDFNDAIRLSSDMFEC-------------- 657
Query: 300 GRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLA----EEDEWETV 351
Q D QEF++F++DQ+H + + L G ++ +S + E D+ E
Sbjct: 658 --SEQHDCQEFVAFLLDQLHTSMYESNKSLHPSPEESEGTDSNKLSDSSKKKEADKEEAD 715
Query: 352 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSEAV 408
K + + T + S ++ +F GQL+S + + ++S++V +PF L L I E V
Sbjct: 716 EEKAERSWTEYEKQNESLVTQLFTGQLRSRLICRTCQSSSSVFEPFTSLSLPIGFEDV 773
>SGD|S000001806 [details] [associations]
symbol:UBP11 "Ubiquitin-specific protease" species:4932
"Saccharomyces cerevisiae" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 SGD:S000001806
EMBL:BK006944 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
eggNOG:COG5533 EMBL:Z28323 PIR:S38177 RefSeq:NP_013024.1
ProteinModelPortal:P36026 SMR:P36026 IntAct:P36026
MINT:MINT-2785419 STRING:P36026 MEROPS:C19.102 EnsemblFungi:YKR098C
GeneID:853973 KEGG:sce:YKR098C CYGD:YKR098c
GeneTree:ENSGT00670000099202 HOGENOM:HOG000142359 KO:K11871
OrthoDB:EOG4QC4DV NextBio:975422 Genevestigator:P36026
GermOnline:YKR098C Uniprot:P36026
Length = 717
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 70/264 (26%), Positives = 116/264 (43%)
Query: 187 KAINEPV-KSVKDLLPR----GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA 241
KA N PV + DLL GL N N C++N+ +Q L + F L + R
Sbjct: 278 KAYNLPVIEDSNDLLSELSITGLQNPCNTCYINSIIQCLFGTTLFRDLFLTKKYRLFLNT 337
Query: 242 G-YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--VPNSI 298
YP + KK L+ GR P+ F + K PD +P+
Sbjct: 338 NKYPKEVQLSRSIYVL-------FKKM---YLNGGRAIIPNRFLKMCKKLRPDLNIPDD- 386
Query: 299 SGRPRQEDAQEFLSFIMDQMHDEL-----LKLQGESTSINGANTALVSLAEEDEWETVGP 353
Q+D QEFL ++ ++H+EL +K + S + AN V+ ++ ++W
Sbjct: 387 -----QQDTQEFLLIVLARIHEELSNENVVKYYPDLVSYD-ANALQVNPSKYEKWY---- 436
Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHT- 410
++ +T S P + I+ GQL++++K Q GN +S + F +L L I ++++
Sbjct: 437 -ERNVITDGLS--P--IDHIYRGQLENILKCQRCGN-SSYSYSTFYVLSLAIPKLSLYSF 490
Query: 411 --------IEDALRLFSAPENLEG 426
+ED + LF+ E L G
Sbjct: 491 TSKSRKIKLEDCINLFTGDEELSG 514
>UNIPROTKB|Q4R6X7 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:9541 "Macaca fascicularis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0007067 "mitosis" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0016578 "histone
deubiquitination" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045901 "positive regulation of translational
elongation" evidence=ISS] [GO:0051289 "protein homotetramerization"
evidence=ISS] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0045893 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0006974 GO:GO:0003713
GO:GO:0051289 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0042393 GO:GO:0043130 GO:GO:0004197 GO:GO:0004843
GO:GO:0004221 GO:GO:0070537 GO:GO:0045901 HSSP:P40818
HOVERGEN:HBG062704 EMBL:AB169053 EMBL:AB169216 PRIDE:Q4R6X7
Uniprot:Q4R6X7
Length = 826
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 61/231 (26%), Positives = 95/231 (41%)
Query: 182 KEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPK 240
K+ M N P+ S + +GL N GN CF NA +Q L +LL+E++ + I K
Sbjct: 176 KKENMAKENPPMNSPSQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVK 235
Query: 241 AGYPTLTAFVGFVSDFDTPSG---GSSKKKN-ISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
P L + + P S+ N + G +F V K
Sbjct: 236 IEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGIVTPKELFSQVCKKAV----- 290
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
G +Q+D+QE L +++D M E + + S G A + E+ + E KNK
Sbjct: 291 RFKGY-QQQDSQELLRYLLDGMRAE----EHQRVS-KGILKAFGNSTEKLDEEL---KNK 341
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSE 406
+ +PS + IFGG+L S + Q S + FL L L + +
Sbjct: 342 VKDYEKKKSIPSFVDRIFGGELTSTIMCDQCRTVSLVHESFLDLSLPVLDD 392
>UNIPROTKB|F1PQJ0 [details] [associations]
symbol:LOC100686685 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 OMA:KISACVV
GeneTree:ENSGT00670000097591 Ensembl:ENSCAFT00000039055
Uniprot:F1PQJ0
Length = 530
Score = 75 (31.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 370 LSDIFGGQLKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+ IFGG +S ++ QG S+T++P+L + LDI A ++ AL PE LEG
Sbjct: 194 IQHIFGGYWRSQIQCLHCQG--ISSTLEPYLDISLDI--GAAQSVSQALEQLVKPEMLEG 249
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 185 PMKAINEPVK---SVKDL--LPRGLINSGNLCFLNATLQALMSCSP 225
P A P K S +DL + GL N GN C++NATLQ L P
Sbjct: 58 PASAGRPPTKTPLSWEDLSQVGAGLQNMGNTCYVNATLQCLTYTEP 103
Score = 63 (27.2 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALV 340
+QEDA E+L FI+D M L S S + ++ L+
Sbjct: 157 KQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQDSTLI 194
>DICTYBASE|DDB_G0293770 [details] [associations]
symbol:DDB_G0293770 "putative ubiquitin
carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
dictyBase:DDB_G0293770 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AAFI02000219 KO:K11835 RefSeq:XP_628978.1
ProteinModelPortal:Q54BB6 EnsemblProtists:DDB0237691 GeneID:8629409
KEGG:ddi:DDB_G0293770 OMA:YTAFALN ProtClustDB:CLSZ2497072
Uniprot:Q54BB6
Length = 1085
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 59/214 (27%), Positives = 94/214 (43%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + P + L + DI K P +G D T
Sbjct: 339 GLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTN-P-----LGCHGDLATDYA 392
Query: 262 GSSKKKNISVLDIGRPFS--PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ I+ + G S P F+ ++ F P +G Q D+QE L+F++D +H
Sbjct: 393 -----ELITEIWEGTYSSVYPRKFKGQIERFAPQ----FAGY-HQHDSQELLAFLLDGLH 442
Query: 320 DELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
++L K++ E +G +++ +++WE +N S + D F
Sbjct: 443 EDLNKVKKKPFHEGKDYDGRPDDVIA---KEQWEMHKSRNNSVIV-----------DWFQ 488
Query: 376 GQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAV 408
QLKS +V S T PF+ L L + SE +
Sbjct: 489 SQLKSKLVCPVCQNISITFDPFMYLSLPLPSETI 522
>UNIPROTKB|F1NES4 [details] [associations]
symbol:LOC100858727 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0048642 "negative
regulation of skeletal muscle tissue development" evidence=IEA]
InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS01360
PROSITE:PS50235 PROSITE:PS50865 GO:GO:0005829 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511
GO:GO:0004843 GO:GO:0004221 InterPro:IPR007052 PROSITE:PS51203
GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
Pfam:PF08959 EMBL:AADN02014171 IPI:IPI00585404
Ensembl:ENSGALT00000011032 Uniprot:F1NES4
Length = 610
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 56/206 (27%), Positives = 97/206 (47%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG- 261
GL+N GN CF+N+ +Q+L + +ELR Y +F ++ ++ P G
Sbjct: 225 GLVNLGNTCFMNSVIQSLSNT-------RELRD-------YFHDRSFESEIN-YNNPLGT 269
Query: 262 GSSKKKNISVL------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
G ++L F PS +A++ + + +G Q DAQEF++F++
Sbjct: 270 GGRLAIGFAMLLRALWKGTHHAFQPSKLKAIVASKA----SQFTGYA-QHDAQEFMAFLL 324
Query: 316 DQMHDELLKLQGES-TSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
D +H++L ++Q + T ++ + E+ W+ ++K R SF+ D+F
Sbjct: 325 DGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQ----RHKM---RNDSFIV----DLF 373
Query: 375 GGQLKS-VVKAQGNKASATVQPFLLL 399
GQ KS +V +K S T PFL L
Sbjct: 374 QGQYKSKLVCPVCSKVSITFDPFLYL 399
>TAIR|locus:2058490 [details] [associations]
symbol:UBP5 "ubiquitin-specific protease 5" species:3702
"Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA;TAS] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 EMBL:AC002409 eggNOG:COG5560
HOGENOM:HOG000264375 KO:K11835 EMBL:AF048705 EMBL:AY099701
EMBL:BT000300 IPI:IPI00536303 PIR:T00757 RefSeq:NP_565944.1
UniGene:At.12368 ProteinModelPortal:O22207 SMR:O22207 IntAct:O22207
MEROPS:C19.093 PaxDb:O22207 PRIDE:O22207 EnsemblPlants:AT2G40930.1
GeneID:818691 KEGG:ath:AT2G40930 GeneFarm:4913 TAIR:At2g40930
InParanoid:O22207 OMA:ADEYWAN PhylomeDB:O22207
ProtClustDB:CLSN2688853 Genevestigator:O22207 GermOnline:AT2G40930
Uniprot:O22207
Length = 924
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 39/125 (31%), Positives = 62/125 (49%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN CF+N+ +Q L+ F QE ++I P +G V + G
Sbjct: 318 GLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQN-P-----LGMVGELALAFGD 371
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+K + GR P +P F+A L F P SG Q D+QE L+F++D +H++
Sbjct: 372 LLRK----LWAPGRTPIAPRPFKAKLARFAPQ----FSGY-NQHDSQELLAFLLDGLHED 422
Query: 322 LLKLQ 326
L +++
Sbjct: 423 LNRVK 427
>UNIPROTKB|E1C0G5 [details] [associations]
symbol:E1C0G5 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0000281 "cytokinesis after
mitosis" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0007265 "Ras protein signal
transduction" evidence=IEA] [GO:0019897 "extrinsic to plasma
membrane" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
Pfam:PF08969 EMBL:AADN02041582 IPI:IPI00592203
Ensembl:ENSGALT00000009484 Uniprot:E1C0G5
Length = 1082
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 40/123 (32%), Positives = 59/123 (47%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
Q+D+QE L F+MD +H++L K N L L A E W+ N+S +
Sbjct: 830 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIVA- 888
Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+F GQ KS V+ +K S T + F+ L L + S + T+++ LRLFS
Sbjct: 889 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKE 938
Query: 422 ENL 424
E L
Sbjct: 939 EKL 941
>WB|WBGene00011216 [details] [associations]
symbol:usp-46 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0071947 "protein deubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:2000311 "regulation of
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=IPI] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005768 GO:GO:0008234 GO:GO:0040027
GO:GO:0044297 GO:GO:0004221 EMBL:Z29095 GO:GO:2000311
eggNOG:COG5077 GO:GO:0071947 KO:K11842 GeneTree:ENSGT00650000093027
HOGENOM:HOG000231498 PIR:S40715 RefSeq:NP_499162.2
RefSeq:NP_499163.2 UniGene:Cel.6955 ProteinModelPortal:P34547
SMR:P34547 STRING:P34547 MEROPS:C19.A37 PaxDb:P34547 PRIDE:P34547
EnsemblMetazoa:R10E11.3a.1 EnsemblMetazoa:R10E11.3a.2 GeneID:176381
KEGG:cel:CELE_R10E11.3 UCSC:R10E11.3a.1 CTD:176381
WormBase:R10E11.3a WormBase:R10E11.3b InParanoid:P34547 OMA:STDANIQ
NextBio:892334 Uniprot:P34547
Length = 426
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 60/243 (24%), Positives = 104/243 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C+ N+ +QAL C PF + + + + + K+G + V ++D
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYK-QTLKKSG-ASKDNLVTCLADLFHSI-- 83
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+S+K+ + + +P F LK N + Q+DA EF +++++ + + L
Sbjct: 84 ASQKRRVGTI------APKRFITKLKK-----ENELFDNYMQQDAHEFFNYLINTISETL 132
Query: 323 LK---LQGESTSINGA----NT------ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
++ + E S +G N A L DE T +N FL +
Sbjct: 133 IQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGT-SERNGGITVEGNEFLNKS 191
Query: 370 -----LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
+ +IF G L + + S+ + FL L +D+ E +I LR+FS E
Sbjct: 192 DTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDV--EQNTSISHCLRVFSETET 249
Query: 424 LEG 426
L G
Sbjct: 250 LCG 252
>ZFIN|ZDB-GENE-050227-1 [details] [associations]
symbol:fbxl22 "F-box and leucine-rich repeat protein
22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
Length = 527
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 59/220 (26%), Positives = 104/220 (47%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+NA LQ+L + F +EL + + ++G TA + T S G
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVAL-RSGK---TAGRRM---YHTRSQG 216
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 314
S ++S+++ R S+++ F+PD + S G +Q+DA EFL ++
Sbjct: 217 DS---SVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGY-QQQDAHEFLRYL 272
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+D +H E+ QG NG+ + V+ E + ++K + T + + S +
Sbjct: 273 LDHLHREM---QGNK---NGSPSPPVTSDEPNH----ASESKCFINGTSTIVTSVFGGVL 322
Query: 375 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSE-AVHTIED 413
++ ++ G + S PFL L LDI ++ + T +D
Sbjct: 323 QNEVYCLIC--GTE-SRKFDPFLDLSLDIPNQFRIKTTKD 359
>UNIPROTKB|E2QRF0 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 EMBL:AL137784 EMBL:AL513550
HGNC:HGNC:20080 ChiTaRS:USP45 IPI:IPI00966628
ProteinModelPortal:E2QRF0 SMR:E2QRF0 Ensembl:ENST00000369233
ArrayExpress:E2QRF0 Bgee:E2QRF0 Uniprot:E2QRF0
Length = 766
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 56/236 (23%), Positives = 101/236 (42%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG-FVSD 255
++L RG+ N GN CF NA +Q L L+ E++ +P+ + + V +
Sbjct: 185 RNLSVRGITNLGNTCFFNAVMQNLAQTYTLTDLMNEIKESSTKLKIFPSSDSQLDPLVVE 244
Query: 256 FDTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
P +S ++ + G P SP + L P + +Q+D+QE L
Sbjct: 245 LSRPGPLTSALFLFLHSMKETEKG-PLSPKVLFNQLCQKAPRFKDF-----QQQDSQELL 298
Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
+++D + E K + +++ + N A+++ + V K V +F+
Sbjct: 299 HYLLDAVRTEETK-RIQASILKAFNNPTTKTADDETRKKVKAYGKEGVK--MNFIDR--- 352
Query: 372 DIFGGQLKSVVKAQGNKASATVQ-PFLLLHLDIYSEAVHTIED--ALRLFSAPENL 424
IF G+L S V + +TV+ PF+ + L I E I D +R S+ E +
Sbjct: 353 -IFIGELTSTVMCEECANISTVKDPFIDISLPIIEERSQLIHDRKCIRKLSSGETV 407
>UNIPROTKB|E2R2N1 [details] [associations]
symbol:LOC609437 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
EMBL:AAEX03010567 Ensembl:ENSCAFT00000013563
Ensembl:ENSCAFT00000024077 OMA:CQGVSDT Uniprot:E2R2N1
Length = 534
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 370 LSDIFGGQLKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+ +FGG +S ++ QG S+T++P+L + LDI +A H++ AL PE LEG
Sbjct: 194 IQQLFGGYWRSQIQCLHCQG--ISSTLEPYLDISLDI-GDA-HSVSQALEQLVKPELLEG 249
Score = 68 (29.0 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL 230
GL N GN C++NATLQ L P +
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM 108
Score = 60 (26.2 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELL 323
R +QEDA E+L FI+D M L
Sbjct: 155 RHKQEDAHEYLMFILDAMQQACL 177
>UNIPROTKB|Q9Y5T5 [details] [associations]
symbol:USP16 "Ubiquitin carboxyl-terminal hydrolase 16"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0007067 "mitosis" evidence=IDA] [GO:0051289 "protein
homotetramerization" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016578 "histone deubiquitination" evidence=IDA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IDA]
[GO:0045901 "positive regulation of translational elongation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0007049
"cell cycle" evidence=TAS] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 EMBL:CH471079 GO:GO:0006351
GO:GO:0006974 GO:GO:0003713 GO:GO:0051289 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0042393 GO:GO:0043130
GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 EMBL:AL163249
GO:GO:0070537 GO:GO:0045901 EMBL:AF129075 eggNOG:COG5560
MEROPS:C19.021 CTD:10600 HOVERGEN:HBG062704 KO:K11844 OMA:CKNVAEE
EMBL:AF126736 EMBL:AY333928 EMBL:AK023247 EMBL:AK302247
EMBL:AK294284 EMBL:AK222681 EMBL:AK222884 EMBL:BC030777
EMBL:AF113219 IPI:IPI00001780 IPI:IPI00428464 IPI:IPI00792644
IPI:IPI00923398 IPI:IPI00923450 RefSeq:NP_001001992.1
RefSeq:NP_001027582.1 RefSeq:NP_006438.1 UniGene:Hs.99819 PDB:2I50
PDBsum:2I50 ProteinModelPortal:Q9Y5T5 SMR:Q9Y5T5 IntAct:Q9Y5T5
STRING:Q9Y5T5 PhosphoSite:Q9Y5T5 DMDM:6686071 PaxDb:Q9Y5T5
PRIDE:Q9Y5T5 DNASU:10600 Ensembl:ENST00000334352
Ensembl:ENST00000399975 Ensembl:ENST00000399976 GeneID:10600
KEGG:hsa:10600 UCSC:uc002ymw.3 UCSC:uc002ymx.3 UCSC:uc011acm.2
GeneCards:GC21P030396 H-InvDB:HIX0023011 HGNC:HGNC:12614
HPA:HPA021140 MIM:604735 neXtProt:NX_Q9Y5T5 PharmGKB:PA37240
InParanoid:Q9Y5T5 PhylomeDB:Q9Y5T5 ChiTaRS:USP16
EvolutionaryTrace:Q9Y5T5 GenomeRNAi:10600 NextBio:40254
ArrayExpress:Q9Y5T5 Bgee:Q9Y5T5 CleanEx:HS_USP16
Genevestigator:Q9Y5T5 GermOnline:ENSG00000156256 Uniprot:Q9Y5T5
Length = 823
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 61/231 (26%), Positives = 96/231 (41%)
Query: 182 KEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPK 240
K+ M N P+ S + +GL N GN CF NA +Q L +LL+E++ + I K
Sbjct: 176 KKENMAKENPPMNSPCQITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVK 235
Query: 241 AGYPTLTAFVGFVSDFDTPSG---GSSKKKN-ISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
P L + + P S+ N + G +F V K
Sbjct: 236 IEPPDLALTEPLEINLEPPGPLTLAMSQFLNEMQETKKGVVTPKELFSQVCKKAV----- 290
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
G +Q+D+QE L +++D M E + + S G A + E+ + E KNK
Sbjct: 291 RFKGY-QQQDSQELLRYLLDGMRAE----EHQRVS-KGILKAFGNSTEKLDEEL---KNK 341
Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSE 406
+ +PS + IFGG+L S++ Q S + FL L L + +
Sbjct: 342 VKDYEKKKSMPSFVDRIFGGELTSMIMCDQCRTVSLVHESFLDLSLPVLDD 392
>DICTYBASE|DDB_G0284381 [details] [associations]
symbol:DDB_G0284381 "putative ubiquitin
carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
dictyBase:DDB_G0284381 GO:GO:0008234 GO:GO:0006511
EMBL:AAFI02000064 GO:GO:0004221 eggNOG:COG5560 KO:K11835
RefSeq:XP_638597.1 ProteinModelPortal:Q54PQ7
EnsemblProtists:DDB0237697 GeneID:8624568 KEGG:ddi:DDB_G0284381
OMA:AYELPHA Uniprot:Q54PQ7
Length = 1089
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 72/296 (24%), Positives = 126/296 (42%)
Query: 79 FQPSTLLKKDDKVKSVGASND-----HDLGAVG-CPKENGHIKNSTNGPALS-NGVNHLK 131
FQP+ S +S+D H+ + K+ G+I P S + ++ +
Sbjct: 274 FQPNNNCHSSSNSSSSASSSDQSSSHHNPKLMNKISKKIGNIFKKKTHPGRSYSDPSYYQ 333
Query: 132 ADGIDFSSFHQNAGGHA-NPSPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAIN 190
+G SS + N+ G+ N S +G ++ RD ++ + SS + ++ P N
Sbjct: 334 NNG---SSNNNNSNGNGGNNGNQSGGASTTNGGMNIRDNSSTSSTSSSNSNENSPTFEQN 390
Query: 191 EPVKS-VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTA 248
K + + GL N GN CF+N+++Q L P V+ R DI K P
Sbjct: 391 GSTKELISNGKVCGLSNLGNTCFMNSSIQCLAHTGPLVEYFLSGRYLGDINKTN-PL--G 447
Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
G ++D G K S +P + ++ + P + IS Q+D+Q
Sbjct: 448 MKGQIADIY----GKLMKDMWSGSSC---VAPKHLKWIIGKYAPQF-SGIS----QQDSQ 495
Query: 309 EFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
E LSF++D +H++L K+ Q E +V +A E +W+ +N+S +
Sbjct: 496 ELLSFLLDGLHEDLNKVIKKPYQEEKDEPKEPREDIV-VANE-QWDNHIKRNQSII 549
>TAIR|locus:2037985 [details] [associations]
symbol:UBP11 "AT1G32850" species:3702 "Arabidopsis
thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AC006424 HSSP:P40818 eggNOG:COG5560 HOGENOM:HOG000264375
KO:K11835 ProtClustDB:CLSN2689389 IPI:IPI00534425 PIR:C86453
RefSeq:NP_174562.2 UniGene:At.51891 ProteinModelPortal:Q9MAQ3
SMR:Q9MAQ3 MEROPS:C19.A04 EnsemblPlants:AT1G32850.1 GeneID:840179
KEGG:ath:AT1G32850 TAIR:At1g32850 InParanoid:Q9MAQ3 OMA:HCSASEC
PhylomeDB:Q9MAQ3 Genevestigator:Q9MAQ3 Uniprot:Q9MAQ3
Length = 892
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 49/163 (30%), Positives = 78/163 (47%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+TLQ L P V+ LQ+ R+ DI A P +G + G
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRS-DI-NAKNP-----LGMRGELAIAFG 354
Query: 262 GSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
+K + G+ +P F+ L F P SG Q D+QE L+F++D +H+
Sbjct: 355 ELLRK----LWSSGQNTVAPRAFKTKLARFAPQ----FSGY-NQHDSQEMLAFLLDGLHE 405
Query: 321 ELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
+L K++ E+ +G V+ E++W+ +N S +
Sbjct: 406 DLNKVKRKPYIEAKDSDGRPDDEVA---EEKWKYHKARNDSVI 445
>UNIPROTKB|E1C3M0 [details] [associations]
symbol:USP45 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
OMA:CEEKCET EMBL:AADN02002249 EMBL:AADN02002250 EMBL:AADN02002251
IPI:IPI00682564 Ensembl:ENSGALT00000024961 Uniprot:E1C3M0
Length = 738
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 55/212 (25%), Positives = 94/212 (44%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSDFDTPS 260
+G+ N GN CF NA +Q L +L+ E++ + K + + + V + +P
Sbjct: 122 KGINNLGNTCFFNAVMQNLAQTHILNELMYEMKEKGTKLKICHTSDSQLDPLVVNLSSPG 181
Query: 261 GGSSKKKNI--SVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+S S+ + GR P SP + + L P G +Q+D+QE L +++D
Sbjct: 182 PLTSAMFLFLHSMREAGRGPLSPKVLFSQLCQKAP----RFKGF-QQQDSQELLHYLLDA 236
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
M E K + ++ + N A+E+ V + V +F+ IF G+
Sbjct: 237 MRIEETK-RIQTGILKAFNNPTTKTADEETRRKVKAYGREGVK--MNFIDR----IFVGE 289
Query: 378 LKSVVKAQGNKASATV-QPFLLLHLDIYSEAV 408
L S V + + +TV +PF+ L L I E V
Sbjct: 290 LTSTVMCEECENISTVKEPFIDLSLPIIEERV 321
>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
symbol:usp33 "ubiquitin specific peptidase 33"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016477 "cell migration"
evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
protein signaling pathway" evidence=ISS] [GO:0007411 "axon
guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
Length = 897
Score = 86 (35.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQE 232
GL N GN C++NA LQAL +C P Q E
Sbjct: 157 GLKNIGNTCYMNAALQALSNCPPLTQFFLE 186
Score = 80 (33.2 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED 346
Q+D+QEFL +MDQ+H+EL +L E N A A+ +ED
Sbjct: 240 QQDSQEFLRCLMDQLHEELKELIPEPEDPNQA-VAMDDSPDED 281
Score = 46 (21.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
T+ Q S +S++F G + S V+ ++ S T++ F + L I + ED +L
Sbjct: 428 TKRQRKYHSIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIPGK-----EDLAKLH 482
Query: 419 SAPENLEGYRTSSTG 433
S+ + S G
Sbjct: 483 SSSHQTALVKAGSCG 497
>UNIPROTKB|Q2HJE4 [details] [associations]
symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0060389
"pathway-restricted SMAD protein phosphorylation" evidence=ISS]
[GO:0035520 "monoubiquitinated protein deubiquitination"
evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=ISS] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0005160
"transforming growth factor beta receptor binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR013792 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205
GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
GeneTree:ENSGT00670000097750 EMBL:DAAA02013374 EMBL:DAAA02013375
EMBL:DAAA02013376 EMBL:DAAA02013377 EMBL:DAAA02013378 EMBL:BC105521
IPI:IPI00697254 RefSeq:NP_001039895.1 RefSeq:XP_003586138.1
UniGene:Bt.29017 ProteinModelPortal:Q2HJE4 SMR:Q2HJE4
MEROPS:C19.022 PRIDE:Q2HJE4 Ensembl:ENSBTAT00000037574
GeneID:538284 KEGG:bta:538284 InParanoid:Q2HJE4 OMA:RMDPLAK
OrthoDB:EOG4DNF3R NextBio:20877322 Uniprot:Q2HJE4
Length = 952
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 53/214 (24%), Positives = 91/214 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ Q L + P + L + + + G ++
Sbjct: 261 GLSNLGNTCFMNSAFQCLSNTPPLTEYF--LNDKYQEELNFDNPLGMRGEIA-------- 310
Query: 263 SSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
S + I + G+ +P F+ + F P SG +Q+D QE L+F++D +H+
Sbjct: 311 KSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQ----FSGY-QQQDCQELLAFLLDGLHE 365
Query: 321 ELLKLQGES-TSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+L +++ + + A+ + E+ WE +N S + DIF G K
Sbjct: 366 DLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV-----------DIFHGLFK 414
Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
S +V + K S T PF L L + + T+E
Sbjct: 415 STLVCPECAKISVTFDPFCYLTLPLPMKKERTLE 448
>CGD|CAL0003741 [details] [associations]
symbol:DOA4 species:5476 "Candida albicans" [GO:0071285
"cellular response to lithium ion" evidence=IMP] [GO:0005768
"endosome" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006275
"regulation of DNA replication" evidence=IEA] [GO:0006897
"endocytosis" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
evidence=IEA] [GO:0010995 "free ubiquitin chain depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
Length = 811
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 50/208 (24%), Positives = 88/208 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS-- 260
GL+N GN C++N +Q L + T Y + + T
Sbjct: 422 GLVNLGNSCYMNCVIQCLAATPQLTSFFFPTITESFSDHSYKR---HINVNNKLGTKGML 478
Query: 261 GGSSKKKNISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
S + +S+L+ GR FSPS F+ ++ + +P + Q+D EFL+F++D +H
Sbjct: 479 TTSFVELILSMLNNNGRSFSPSKFKKIMGSLSP--ARQFASFD-QQDCIEFLNFLLDALH 535
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGG 376
++L ++ T L E+++ + P ++ + +L S + D F G
Sbjct: 536 EDLNQVTIADPQERKMITELTP--EQEKNREILPVRLASTIEWERYLKLNFSIIVDYFQG 593
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDI 403
Q S +K + S T F +L L I
Sbjct: 594 QYLSQLKCLECGFTSTTYNAFSILSLPI 621
>UNIPROTKB|Q59ZY4 [details] [associations]
symbol:DOA4 "Ubiquitin carboxyl-terminal hydrolase"
species:237561 "Candida albicans SC5314" [GO:0071285 "cellular
response to lithium ion" evidence=IMP] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
Length = 811
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 50/208 (24%), Positives = 88/208 (42%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS-- 260
GL+N GN C++N +Q L + T Y + + T
Sbjct: 422 GLVNLGNSCYMNCVIQCLAATPQLTSFFFPTITESFSDHSYKR---HINVNNKLGTKGML 478
Query: 261 GGSSKKKNISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
S + +S+L+ GR FSPS F+ ++ + +P + Q+D EFL+F++D +H
Sbjct: 479 TTSFVELILSMLNNNGRSFSPSKFKKIMGSLSP--ARQFASFD-QQDCIEFLNFLLDALH 535
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGG 376
++L ++ T L E+++ + P ++ + +L S + D F G
Sbjct: 536 EDLNQVTIADPQERKMITELTP--EQEKNREILPVRLASTIEWERYLKLNFSIIVDYFQG 593
Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDI 403
Q S +K + S T F +L L I
Sbjct: 594 QYLSQLKCLECGFTSTTYNAFSILSLPI 621
>TAIR|locus:2139222 [details] [associations]
symbol:UBP10 "AT4G10590" species:3702 "Arabidopsis
thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 HSSP:P40818
eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
ProtClustDB:CLSN2689389 EMBL:AY054463 EMBL:BT010363 IPI:IPI00534120
PIR:T04194 RefSeq:NP_567363.1 RefSeq:NP_849356.1 UniGene:At.10964
UniGene:At.67146 ProteinModelPortal:Q93Y01 SMR:Q93Y01
MEROPS:C19.A03 PaxDb:Q93Y01 PRIDE:Q93Y01 EnsemblPlants:AT4G10590.1
EnsemblPlants:AT4G10590.2 GeneID:826651 KEGG:ath:AT4G10590
TAIR:At4g10590 InParanoid:Q93Y01 OMA:MDQDILL PhylomeDB:Q93Y01
Genevestigator:Q93Y01 Uniprot:Q93Y01
Length = 910
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L P V+ + + DI + P +G + G
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDN-P-----LGMCGELAIAFGD 357
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
KK + GR +P F+ L F P SG Q D+QE L+F++D +H++
Sbjct: 358 LLKK----LWSSGRNSVAPRAFKTKLARFAPQ----FSGY-NQHDSQELLAFLLDGLHED 408
Query: 322 LLKLQGES-TSINGANTALVSLAEEDEWETVGPKNKSAV 359
L K++ + + +++ E+ W +N S +
Sbjct: 409 LNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVI 447
>TAIR|locus:2139202 [details] [associations]
symbol:UBP9 "AT4G10570" species:3702 "Arabidopsis
thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 EMBL:BT004132
IPI:IPI00521385 PIR:T04192 RefSeq:NP_192795.3 UniGene:At.48842
HSSP:P40818 ProteinModelPortal:Q9ZSB5 SMR:Q9ZSB5 MEROPS:C19.A02
PaxDb:Q9ZSB5 PRIDE:Q9ZSB5 EnsemblPlants:AT4G10570.1 GeneID:826649
KEGG:ath:AT4G10570 TAIR:At4g10570 eggNOG:COG5560
HOGENOM:HOG000264375 InParanoid:Q9ZSB5 KO:K11835 OMA:ENSANEC
PhylomeDB:Q9ZSB5 ProtClustDB:CLSN2689389 Genevestigator:Q9ZSB5
Uniprot:Q9ZSB5
Length = 923
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L P V+ + + DI + P +G + G
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDN-P-----LGMCGELAIAFGD 358
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
KK + GR +P F+ L F P SG Q D+QE L+F++D +H++
Sbjct: 359 LLKK----LWSSGRNAVAPRAFKTKLARFAPQ----FSGY-NQHDSQELLAFLLDGLHED 409
Query: 322 LLKLQGES-TSINGANTALVSLAEEDEWETVGPKNKSAV 359
L K++ + + +++ E+ W +N S +
Sbjct: 410 LNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVI 448
>RGD|1303052 [details] [associations]
symbol:Usp11 "ubiquitin specific peptidase 11" species:10116
"Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=TAS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0016579 "protein deubiquitination" evidence=ISO]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS50235 RGD:1303052 GO:GO:0005634 GO:GO:0006511
GO:GO:0004197 GO:GO:0004221 MEROPS:C19.014 HOVERGEN:HBG000864
IPI:IPI00421768 UniGene:Rn.2492 EMBL:BN000322
ProteinModelPortal:Q6IE71 PRIDE:Q6IE71 UCSC:RGD:1303052
InParanoid:Q6IE71 ArrayExpress:Q6IE71 Genevestigator:Q6IE71
Uniprot:Q6IE71
Length = 700
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 55/206 (26%), Positives = 93/206 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ +S P QL + L R + + + G +++ +
Sbjct: 36 GLTNLGNTCFMNSALQQCLSNVP--QLTEYFLNNRYLEELNFRNPLGMKGELAE----AY 89
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
K+ S R P++F+ + +F + G +Q D+QE LSF++D +H++
Sbjct: 90 ADLVKQTWS--GYHRSIVPNVFKNKVGHFA----SQFLGY-QQHDSQELLSFLLDGLHED 142
Query: 322 LLKLQG-ESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
L +++ E + NGA + +A+E W+ +N S + D F G K
Sbjct: 143 LNRVKKKEYVELCNGAGRPDLEVAQE-AWQNHKRRNDSVIV-----------DTFHGLFK 190
Query: 380 SVVKAQ--GNKASATVQPFLLLHLDI 403
S + GN S T PF L + +
Sbjct: 191 STLVCPDCGN-VSVTFDPFCYLSVPL 215
>UNIPROTKB|E2R279 [details] [associations]
symbol:E2R279 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 InterPro:IPR006861 OMA:VICALRQ
GeneTree:ENSGT00670000097591 EMBL:AAEX03010545
Ensembl:ENSCAFT00000023252 Uniprot:E2R279
Length = 526
Score = 74 (31.1 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 370 LSDIFGGQLKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
+ +FGG +S ++ QG S+T++ +L + LDI A H++ AL PE LEG
Sbjct: 194 IQQLFGGYWRSQIQCLHCQG--ISSTLESYLDISLDI--AAAHSVSQALEQLVKPELLEG 249
Score = 68 (29.0 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL 230
GL N GN C++NATLQ L P +
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYM 108
Score = 60 (26.2 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 301 RPRQEDAQEFLSFIMDQMHDELL 323
R +QEDA E+L FI+D M L
Sbjct: 155 RHKQEDAHEYLMFILDAMQQACL 177
>ZFIN|ZDB-GENE-030131-5739 [details] [associations]
symbol:usp42 "ubiquitin specific peptidase 42"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5739 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
EMBL:CR932017 IPI:IPI00506707 Ensembl:ENSDART00000003375
ArrayExpress:F1QSB4 Bgee:F1QSB4 Uniprot:F1QSB4
Length = 1047
Score = 85 (35.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTI 411
P NK +TQ+ + + IFGG L+S VK KA S T P+L + L+I + T+
Sbjct: 218 PGNKLD-RQTQA--TTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTL 272
Query: 412 EDALRLFSAPENLEG 426
A F PE L+G
Sbjct: 273 SKAFEQFVKPEQLDG 287
Score = 77 (32.2 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 26/81 (32%), Positives = 37/81 (45%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CFLN+TLQ L +P +L ++ + G+ + + SG
Sbjct: 115 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 174
Query: 262 GSSKKKNISVLD----IGRPF 278
K ISVL+ IG+ F
Sbjct: 175 NVIKP--ISVLNELKRIGKHF 193
Score = 49 (22.3 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 304 QEDAQEFLSFIMDQMHDELL 323
QEDA EFL + +D M L
Sbjct: 198 QEDAHEFLRYTVDAMQKSCL 217
>RGD|1305621 [details] [associations]
symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
"Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
Length = 915
Score = 98 (39.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 69 (29.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 229 QQDTQEFLRCLMDQLHEEL 247
>MGI|MGI:1921520 [details] [associations]
symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
"Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISO]
[GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
Genevestigator:Q8C6M1 Uniprot:Q8C6M1
Length = 916
Score = 98 (39.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 182 KEVPMKAINEPVKSVKD--LLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
K VP+ +E +D L PRGL N GN C++NA LQAL +C P Q E
Sbjct: 120 KAVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLE 175
Score = 69 (29.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 304 QEDAQEFLSFIMDQMHDEL 322
Q+D QEFL +MDQ+H+EL
Sbjct: 229 QQDTQEFLRCLMDQLHEEL 247
>MGI|MGI:98905 [details] [associations]
symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031397 "negative regulation of protein
ubiquitination" evidence=ISO] [GO:0031647 "regulation of protein
stability" evidence=ISO] [GO:0031685 "adenosine receptor binding"
evidence=ISO] [GO:0034394 "protein localization to cell surface"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:98905
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 EMBL:CH466560
GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
HOVERGEN:HBG000864 GeneTree:ENSGT00670000097750 CTD:7375
OMA:CERISRY OrthoDB:EOG4C5CHR MEROPS:C19.010 EMBL:L00681
EMBL:AF026469 EMBL:AK089425 EMBL:AK143582 EMBL:AK149964
EMBL:AK169933 EMBL:AK171271 IPI:IPI00115701 PIR:I58376
RefSeq:NP_035808.2 UniGene:Mm.3974 PDB:3JYU PDBsum:3JYU
ProteinModelPortal:P35123 SMR:P35123 STRING:P35123
PhosphoSite:P35123 PaxDb:P35123 PRIDE:P35123
Ensembl:ENSMUST00000035237 GeneID:22258 KEGG:mmu:22258
InParanoid:Q8BTL9 EvolutionaryTrace:P35123 NextBio:302345
Bgee:P35123 CleanEx:MM_USP4 Genevestigator:P35123
GermOnline:ENSMUSG00000032612 Uniprot:P35123
Length = 962
Score = 120 (47.3 bits), Expect = 0.00093, P = 0.00093
Identities = 46/167 (27%), Positives = 80/167 (47%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + +P + L++ +I + P +G +
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDN-P-----LGMKGEI----- 351
Query: 262 GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ + I + GR +P MF+ + F P SG +Q+D+QE L+FI+D +H
Sbjct: 352 AEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQ----FSGY-QQQDSQELLAFILDGLH 406
Query: 320 DELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
++L +++ E NG A+V+ ++ WE +N S + T
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVA---KEAWENHRLRNDSVIVDT 450
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 436 0.00088 118 3 11 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 113
No. of states in DFA: 610 (65 KB)
Total size of DFA: 247 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.89u 0.63s 39.52t Elapsed: 00:00:02
Total cpu time: 38.91u 0.63s 39.54t Elapsed: 00:00:03
Start: Tue May 21 07:16:43 2013 End: Tue May 21 07:16:46 2013
WARNINGS ISSUED: 1