BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013776
(436 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana
GN=UBP24 PE=1 SV=1
Length = 551
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/447 (52%), Positives = 295/447 (65%), Gaps = 32/447 (7%)
Query: 1 MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
MS+ K+FVFGSFTE ETRS+ + +KP + K +QFGSLN E+S
Sbjct: 1 MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQNSKDKCVGSIQFGSLNLAAENSS 53
Query: 61 VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
V T E K DG V S + S +ND D ++ P+ +NG
Sbjct: 54 VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112
Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
IK S + +L+NGV +K D I + + G ++P + SKF L D D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165
Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
++ + + SI K +K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223
Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
LLQ+++ +DIPKA PTL AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282
Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTG 433
V IEDAL LFSA E+LEGYR S TG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTG 429
>sp|Q7ZXR7|UB10B_XENLA Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis
GN=usp10-b PE=2 SV=1
Length = 805
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 157/274 (57%), Gaps = 31/274 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P +K+ K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKVIKDIRPGAPFEPTYIYRLLTVFK----SS 521
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQE 581
Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
I SE + T++DAL A E+++GY T + V+
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 675
>sp|Q2NL57|UB10A_XENLA Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis
GN=usp10-a PE=2 SV=1
Length = 791
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 156/275 (56%), Gaps = 33/275 (12%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451
Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
P + +FV +++F P + + + V DI G PF P+ +L F +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506
Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVNKEEQ 566
Query: 345 ---EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 567 EGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQL 626
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
DI SE + T++DAL A E+++GY T + V+
Sbjct: 627 DIQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 661
>sp|Q6DIJ4|UBP10_XENTR Ubiquitin carboxyl-terminal hydrolase 10 OS=Xenopus tropicalis
GN=usp10 PE=2 SV=1
Length = 805
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 157/274 (57%), Gaps = 31/274 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 243 YPTLTAFVGFVSDF-DTP----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F + P + +S +K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIYRLLTVFK----SS 521
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQE 581
Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
++EWE VGP++KS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
I SE + T++DAL A E+++GY T + V+
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVE 675
>sp|Q5ZJN4|UBP10_CHICK Ubiquitin carboxyl-terminal hydrolase 10 OS=Gallus gallus GN=USP10
PE=2 SV=1
Length = 785
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 153/275 (55%), Gaps = 32/275 (11%)
Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444
Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500
Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560
Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 561 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 620
Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
DI S+ + T++DAL A E+++GY T + V+
Sbjct: 621 DIQSDKIRTVQDALESLVARESVQGYTTKTKQEVE 655
>sp|Q3KR59|UBP10_RAT Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus
GN=Usp10 PE=2 SV=1
Length = 794
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 155/271 (57%), Gaps = 31/271 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
+++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 402 VHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 457
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSE 573
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 574 DEWEQVGPKNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 633
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
+ + T++DAL A E+++GY T + V+
Sbjct: 634 DKIRTVQDALESLVARESVQGYTTKTKQEVE 664
>sp|A5PJS6|UBP10_BOVIN Ubiquitin carboxyl-terminal hydrolase 10 OS=Bos taurus GN=USP10
PE=2 SV=1
Length = 800
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 149/271 (54%), Gaps = 31/271 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 579
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 580 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 639
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
+ + T++DAL A E+++GY T + V+
Sbjct: 640 DKIRTVQDALESLVARESVQGYTTKTRQEVE 670
>sp|P52479|UBP10_MOUSE Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10
PE=1 SV=3
Length = 792
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 154/271 (56%), Gaps = 31/271 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
+ + T++DAL A E+++GY T + V+
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQEVE 662
>sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10
PE=1 SV=2
Length = 798
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 148/271 (54%), Gaps = 31/271 (11%)
Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
+ + T++DAL A E+++GY T + V+
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQEVE 668
>sp|O94269|UBP3_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp3 PE=3 SV=1
Length = 512
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 52/269 (19%)
Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFV 253
+ + PRG IN+GN+CF+N+ LQALM C PF LL+++ R +P + P + +
Sbjct: 128 RPIQPRGFINTGNICFMNSILQALMYCVPFYNLLKQI-NRMVPYNFERTTPLIESLTMLS 186
Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPR--------Q 304
DF R +S F+ + P+V S + G PR Q
Sbjct: 187 RDF-------------------REYS-EKFDLQGDSILPEVVYSATKGNPRFEMLQTGEQ 226
Query: 305 EDAQEFLSFIMDQMHDELLK------LQGESTS-------INGANTALVSL-----AEED 346
EDA+EFL+ +D++H+E ++ L+ + + NG + L S E
Sbjct: 227 EDAEEFLNLFLDELHEEFVRERRHYLLKNDERNPKSDIKISNGIKSGLDSFDDQSSVEAS 286
Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E
Sbjct: 287 GWTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAE 346
Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNV 435
+H++ DAL +APE L + SS GNV
Sbjct: 347 DIHSVIDALEHMTAPEILPEWH-SSKGNV 374
>sp|O96612|UBPB_DICDI Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1
Length = 451
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWE 349
NS+ Q+DAQEFL F++D +H+E L L E +T++V +D WE
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIV----DDNWE 246
Query: 350 TVGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
VG K K+A+ T +Q LP + +S IF G L+S G+K S TV+PF LHLDI E
Sbjct: 247 VVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEE 306
Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNVQ 436
++++EDAL+ F PE +EGY T ST ++
Sbjct: 307 INSLEDALKFFMKPEIIEGY-TCSTKKIE 334
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-YPTLTAFVGFVSDF 256
RGLIN+ N CF+N LQ+L C F+++++ L D+ G YPTL +F F +++
Sbjct: 19 RGLINTSNTCFMNVILQSLTGCQLFLRVIKNL--SDLEDLGKYPTLHSFNQFYTEY 72
>sp|Q01477|UBP3_YEAST Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP3 PE=1 SV=1
Length = 912
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 137/315 (43%), Gaps = 78/315 (24%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
FD + +KK + D + S F+ A PD ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570
Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
P+ QEDA+EFL+ ++DQ+H+EL
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630
Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
L G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690
Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750
Query: 422 ENLEGYRTSSTGNVQ 436
E L +++SS +V+
Sbjct: 751 E-LLPFKSSSGNDVE 764
>sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana
GN=UBP15 PE=2 SV=2
Length = 924
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 54/240 (22%)
Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531
Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
+ M L+ G T ++ P+ + + + +F
Sbjct: 532 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563
Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 564 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 622
>sp|O60139|UBP4_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp4 PE=1 SV=2
Length = 593
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 63/258 (24%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 247
S ++ P GL N GN C++N LQ L +C P +Q LLQ + T++ G +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279
Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
AF + G R SP F ++++ D SI G Q DA
Sbjct: 280 AFFSLLQSVLLNHG-------------QRSISPRNFLEIVQSLNRDF--SIDG---QCDA 321
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---------------EWETVG 352
QEFL+F +D++H++L + N + + + L E+ EW
Sbjct: 322 QEFLNFFLDKLHEDL--------NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHL 373
Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPF--LLLHLDIYSEAVH 409
NKS V F GQL S + + S T PF L + +D S V
Sbjct: 374 RSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV- 421
Query: 410 TIEDALRLFSAPENLEGY 427
++++ L FSAPE L+G+
Sbjct: 422 SLQECLLKFSAPELLQGH 439
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 105/242 (43%), Gaps = 43/242 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 424 LE 425
LE
Sbjct: 429 LE 430
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
GL N GN CF+N+ LQ L + LQ RD+ + ++ F + T
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
S S SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 80 SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171
Query: 379 K-SVVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
K S+ ++ S PF L L I Y E T+ D LRLF+ + L+G
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDG 222
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 39/233 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
KS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDG 471
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 425 E 425
E
Sbjct: 430 E 430
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 39/233 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 326
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 377
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 378 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 427
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
KS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 428 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDG 478
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
KS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDG 483
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 425 E 425
E
Sbjct: 430 E 430
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 103/242 (42%), Gaps = 42/242 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 424 LE 425
LE
Sbjct: 430 LE 431
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 98/233 (42%), Gaps = 39/233 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
KS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDG 470
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 54/256 (21%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENLE 425
++ D LR F+ E L+
Sbjct: 363 SLRDCLRSFTDLEELD 378
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 54/256 (21%)
Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306
Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 410 TIEDALRLFSAPENLE 425
++ D LR F+ E L+
Sbjct: 363 SLRDCLRSFTDLEELD 378
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 27/201 (13%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN CF+N+ +Q L+ F QE ++I +G V + G
Sbjct: 318 GLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEI------NWQNPLGMVGELALAFGD 371
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
+K + GR P +P F+A L F P SG Q D+QE L+F++D +H++
Sbjct: 372 LLRK----LWAPGRTPIAPRPFKAKLARFAP----QFSGY-NQHDSQELLAFLLDGLHED 422
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS- 380
L +++ + IN + DE E K+ + R S + D+ GQ KS
Sbjct: 423 LNRVKHKPY-INSRDAD----GRPDE-EVADEFWKNHIARNDSI----IVDVCQGQYKST 472
Query: 381 VVKAQGNKASATVQPFLLLHL 401
+V NK S T PF+ L L
Sbjct: 473 LVCPICNKVSVTFDPFMYLSL 493
>sp|B3LGK1|UBP4_YEAS1 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=DOA4 PE=3 SV=1
Length = 926
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 38/238 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI---PKAGYPTLTA--FVGFVSDF 256
GL N GN C++N +Q ++ Q+ L + + I K G + A F V
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
SKK P SP F+ + NS+ Q+D QEF F++D
Sbjct: 623 YKEQVDGSKK---------IPISPIKFKLACGSV-----NSLFKTASQQDCQEFCQFLLD 668
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLP---SALS 371
+H++L + G+N L L++E E E + + S++ + FL S +
Sbjct: 669 GLHEDLNQC--------GSNPPLKELSQEAEARREKLSLRIASSI-EWERFLTTDFSVIV 719
Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLE 425
D+F GQ S +K + + S T QPF +L + I S TIED R F+ ENLE
Sbjct: 720 DLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLE 777
>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
GN=usp20 PE=2 SV=1
Length = 884
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 84/213 (39%), Gaps = 48/213 (22%)
Query: 135 IDFSSFHQNAGGHANPSPISKFHVLCDGN-----IDGRDQNAAACNSSISGSKEVPMKAI 189
+D S+ H A H ++ F V C +D R A+ S ++ P A
Sbjct: 58 VDHSTLHAQAKKHNLTVNLTTFRVWCYACEKEVFLDPRGPPASQTTSPRLSHRDFPTSA- 116
Query: 190 NEPVKSV--------------KDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE 232
P+KSV D+ PRGL N GN C++NA LQAL +C P Q E
Sbjct: 117 -HPLKSVPIAVGDDGESESDEDDIKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLE 175
Query: 233 LRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL-DIGRP--FSPSMFEAVLKN 289
G V P+ S +K IS L RP PS +K
Sbjct: 176 CG----------------GLVRTDKKPALCKSYQKLISELWHKKRPSYVVPSSLYHGIKL 219
Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
P + Q+D QEFL +MDQ+H+EL
Sbjct: 220 INP-----LFRGYSQQDTQEFLRCLMDQLHEEL 247
>sp|P32571|UBP4_YEAST Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DOA4 PE=1 SV=2
Length = 926
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI---PKAGYPTLTA--FVGFVSDF 256
GL N GN C++N +Q ++ Q+ L + + I K G + A F V
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
SKK +IS P F+ + NS+ Q+D QEF F++D
Sbjct: 623 YKEQVDGSKKISIS---------PIKFKLACGSV-----NSLFKTASQQDCQEFCQFLLD 668
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLP---SALS 371
+H++L + G+N L L++E E E + + S++ + FL S +
Sbjct: 669 GLHEDLNQC--------GSNPPLKELSQEAEARREKLSLRIASSI-EWERFLTTDFSVIV 719
Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLE 425
D+F GQ S +K + + S T QPF +L + I S TIED R F+ ENLE
Sbjct: 720 DLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLE 777
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 37/206 (17%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+TLQ L P V+ LQ+ R+ DI A P +G + G
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRS-DI-NAKNP-----LGMRGELAIAFG 354
Query: 262 GSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
+K + G+ +P F+ L F P SG Q D+QE L+F++D +H+
Sbjct: 355 ELLRK----LWSSGQNTVAPRAFKTKLARFAP----QFSGY-NQHDSQEMLAFLLDGLHE 405
Query: 321 ELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
+L K++ E+ +G V+ E++W+ +N S + D+F G
Sbjct: 406 DLNKVKRKPYIEAKDSDGRPDDEVA---EEKWKYHKARNDSVIV-----------DVFQG 451
Query: 377 QLKS-VVKAQGNKASATVQPFLLLHL 401
Q KS +V K S T PF+ L L
Sbjct: 452 QYKSTLVCPDCGKISITFDPFMYLSL 477
>sp|P39944|UBP5_YEAST Ubiquitin carboxyl-terminal hydrolase 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP5 PE=1 SV=1
Length = 805
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 48/242 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN C++N LQ L+ V++ + ++ F+ +FD+ G
Sbjct: 447 GLENIGNCCYMNCILQCLVGTHDLVRMFLD--------------NTYLNFI-NFDSSRGS 491
Query: 263 SSK-KKNISVL--DIGR------------PFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
KN ++L ++ R P F+ + + P +S+ Q+D
Sbjct: 492 KGLLAKNFAILVNNMHRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSM-----QQDC 546
Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSF 365
QEF F++D +H++L + NG+ L L++E+E E + + SA+ +
Sbjct: 547 QEFCQFLLDGLHEDL--------NQNGSKKHLKQLSDEEERMREKMSIRKASALEWERFL 598
Query: 366 LP--SALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
L SA+ D+F GQ S ++ Q S T Q F +L + + I D R F+ E
Sbjct: 599 LTDFSAIIDLFQGQYASRLQCQVCEHTSTTYQTFSVLSVPVPRVKTCNILDCFREFTKCE 658
Query: 423 NL 424
L
Sbjct: 659 RL 660
>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DOA4 PE=3 SV=1
Length = 926
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI---PKAGYPTLTA--FVGFVSDF 256
GL N GN C++N +Q ++ Q+ L + + I K G + A F V
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
SKK +IS P F+ + NS+ Q+D QEF F++D
Sbjct: 623 YKEQVDGSKKISIS---------PIKFKLACGSV-----NSLFKTASQQDCQEFCQFLLD 668
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLP---SALS 371
+H++L + G+N L L++E E E + + S++ + FL S +
Sbjct: 669 GLHEDLNQC--------GSNPPLKELSQEAEARREKLSLRIASSI-EWERFLTTDFSVIV 719
Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLE 425
D+F GQ S +K + + S T QPF +L + I S TIED R F+ ENLE
Sbjct: 720 DLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLE 777
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP12 PE=1
SV=1
Length = 1254
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL+N GN C++N+ LQ L+ D P + G+V+ +
Sbjct: 365 GLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL--GYHGYVARAFSDLVQ 422
Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
+ +S++ F PSMF++ + +F NS+ Q+D+QEFL+F++D +H++L
Sbjct: 423 KLFQNRMSIMQRNAAFPPSMFKSTIGHF-----NSMFSGYMQQDSQEFLAFLLDSLHEDL 477
Query: 323 LK-LQGESTS---------INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
+ ++ E T +N N +V +D WE +N S +T D
Sbjct: 478 NRIIKKEYTEKPSLSPGDDVNDWN--VVKKLADDTWEMHLKRNCSVIT-----------D 524
Query: 373 IFGGQLKSVVKA-QGNKASATVQPF 396
+F G KS + + S T P+
Sbjct: 525 LFVGMYKSTLYCPECQNVSITFDPY 549
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 38/224 (16%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++NA LQ L S SP V+ L + TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDCSEVATAFAYLMTDM----- 99
Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----TKKTQQDAQEFLIYVLNELHEA 145
Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
L K + +A + ET S ++ +F GQL S
Sbjct: 146 LKKYHYPRRRSHEKGSAQRCCRKWITTET-----------------SVITQLFEGQLNYS 188
Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
+V + K + + F +L L I SE +++D L+ F + L
Sbjct: 189 IVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTL 232
>sp|P36026|UBP11_YEAST Ubiquitin carboxyl-terminal hydrolase 11 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP11 PE=3
SV=1
Length = 717
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 61/269 (22%)
Query: 187 KAINEPV-KSVKDLLPR----GLINSGNLCFLNATLQALMSCSPFVQLLQE------LRT 235
KA N PV + DLL GL N N C++N+ +Q L + F L L T
Sbjct: 278 KAYNLPVIEDSNDLLSELSITGLQNPCNTCYINSIIQCLFGTTLFRDLFLTKKYRLFLNT 337
Query: 236 RDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-- 293
PK + + +V F + L+ GR P+ F + K PD
Sbjct: 338 NKYPKEVQLSRSIYVLFKKMY---------------LNGGRAIIPNRFLKMCKKLRPDLN 382
Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDEL-----LKLQGESTSINGANTALVSLAEEDEW 348
+P+ Q+D QEFL ++ ++H+EL +K + S + AN V+ ++ ++W
Sbjct: 383 IPDD------QQDTQEFLLIVLARIHEELSNENVVKYYPDLVSYD-ANALQVNPSKYEKW 435
Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSE 406
++ +T S + I+ GQL++++K Q GN +S + F +L L I
Sbjct: 436 -----YERNVITDGL----SPIDHIYRGQLENILKCQRCGN-SSYSYSTFYVLSLAIPKL 485
Query: 407 AVHT---------IEDALRLFSAPENLEG 426
++++ +ED + LF+ E L G
Sbjct: 486 SLYSFTSKSRKIKLEDCINLFTGDEELSG 514
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8
PE=1 SV=2
Length = 1080
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 91/227 (40%), Gaps = 32/227 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 892
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
KS V+ + S T + F+ L L + S + T++D LRLFS E L
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKL 939
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 48/212 (22%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + +P + L++ +I + D P G
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINR----------------DNPLG 346
Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + I + GR +P MF+ + F P SG +Q+D+QE L+FI
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFI 401
Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 402 LDGLHEDLNRVKKKPYLEPKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 448
Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHL 401
D F G KS +V + K S T PF L L
Sbjct: 449 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTL 479
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 91/232 (39%), Gaps = 55/232 (23%)
Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 227
Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 228 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 270
Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
M L DE+ E V P T Q IFG
Sbjct: 271 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 300
Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
G L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G
Sbjct: 301 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQG 351
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8
PE=1 SV=1
Length = 1118
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 32/227 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881
Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 930
Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
KS V+ +K S T + F+ L L + S + T++D LRLFS E L
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKL 977
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 55/233 (23%)
Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
+L P GL+N GN CF N LQ L P V LL++ R+ + + F+ +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDW-------CFLCEF 216
Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
T +S+ + PFSP + L N + G RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSRF--------PFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263
Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIF 374
M L DE+ E + P T Q IF
Sbjct: 264 MMQSVCL----------------------DEFGGEKIVPPRSQETTLIQY--------IF 293
Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
GG L+S V+ N S + + L ++++ +A ++E+ L F+A E L G
Sbjct: 294 GGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA-GSLEECLDQFTAEEWLHG 345
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + P + L++ +I + D P G
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINR----------------DNPLG 346
Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + I + GR +P MF+ + F P SG +Q+D+QE L+FI
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFI 401
Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 402 LDGLHEDLNRVKKKPYLEPKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 448
Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDI 403
D F G KS +V + K S T PF L L +
Sbjct: 449 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 54/241 (22%)
Query: 201 PRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
P GLIN GN CF N Q LM P LQ+ +R K F V
Sbjct: 541 PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLV------ 594
Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
+ + P SP+ + L+N G ++EDA EFL F++D M
Sbjct: 595 ---------VKAKEEKSPLSPNGLLSQLQNI-----GIFLGNGKEEDAHEFLRFVVDTM- 639
Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
+S I + + ++ ++ +G FGG L+
Sbjct: 640 --------QSVCIKASEYDMTKSSKLEDTTLIGL-------------------TFGGYLR 672
Query: 380 SVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNV 435
S +K + + ++ ++ L ++I + + T++DALR F+ E L+G YR S +
Sbjct: 673 SKIKCMKCQVKSELREKMMDLTVEIDGD-ISTLDDALRRFTRTEILDGENKYRCGSCKSY 731
Query: 436 Q 436
+
Sbjct: 732 E 732
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG- 261
GL N GN CF+N+ +Q L + P + + ++ +FD P G
Sbjct: 290 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQE---------------ELNFDNPLGM 334
Query: 262 ----GSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S + I + G+ +P F+ + F P SG +Q+D QE L+F++
Sbjct: 335 RGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAP----QFSGY-QQQDCQELLAFLL 389
Query: 316 DQMHDELLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
D +H++L +++ + + A+ + E+ WE +N S + DIF
Sbjct: 390 DGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV-----------DIF 438
Query: 375 GGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
G KS +V + K S T PF L L + + T+E L
Sbjct: 439 HGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYL 480
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L P V+ + + DI + P +G + G
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDN-P-----LGMCGELAIAFGD 357
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
KK + GR +P F+ L F P SG Q D+QE L+F++D +H++
Sbjct: 358 LLKK----LWSSGRNSVAPRAFKTKLARFAP----QFSGY-NQHDSQELLAFLLDGLHED 408
Query: 322 LLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L K++ + + +++ E+ W +N S + D+ GQ KS
Sbjct: 409 LNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIV-----------DVCQGQYKS 457
Query: 381 -VVKAQGNKASATVQPFLLL 399
+V K S T PF+ L
Sbjct: 458 TLVCPACGKISITFDPFMYL 477
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
GL N GN CF+N+ LQ L P V+ + + DI + P +G + G
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDN-P-----LGMCGELAIAFGD 358
Query: 263 SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
KK + GR +P F+ L F P SG Q D+QE L+F++D +H++
Sbjct: 359 LLKK----LWSSGRNAVAPRAFKTKLARFAP----QFSGY-NQHDSQELLAFLLDGLHED 409
Query: 322 LLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
L K++ + + +++ E+ W +N S + D+ GQ KS
Sbjct: 410 LNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIV-----------DVCQGQYKS 458
Query: 381 -VVKAQGNKASATVQPFLLL 399
+V K S T PF+ L
Sbjct: 459 TLVCPVCGKISITFDPFMYL 478
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG- 261
GL N GN CF+N+ Q L + P + + ++ +FD P G
Sbjct: 261 GLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQE---------------ELNFDNPLGM 305
Query: 262 ----GSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S + I + G+ +P F+ + F P SG +Q+D QE L+F++
Sbjct: 306 RGEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAP----QFSGY-QQQDCQELLAFLL 360
Query: 316 DQMHDELLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
D +H++L +++ + + A+ + E+ WE +N S + DIF
Sbjct: 361 DGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV-----------DIF 409
Query: 375 GGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
G KS +V + K S T PF L L + + T+E L
Sbjct: 410 HGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYL 451
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + +P L++ +I + D P G
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINR----------------DNPLG 346
Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + I + GR +P MF+ + F P SG +Q+D+QE L+F+
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFL 401
Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 402 LDGLHEDLNRVKKKPYLELKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 448
Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDI 403
D F G KS +V + K S T PF L L +
Sbjct: 449 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 48/214 (22%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
GL N GN CF+N+ LQ L + +P L++ +I + D P G
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINR----------------DNPLG 346
Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
+ + I + GR +P MF+ + F P SG +Q+D+QE L+F+
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFL 401
Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 402 LDGLHEDLNRVKKKPYLELKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 448
Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDI 403
D F G KS +V + K S T PF L L +
Sbjct: 449 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q8C6M1|UBP20_MOUSE Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20
PE=1 SV=1
Length = 916
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 198 DLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
DL PRGL N GN C++NA LQAL +C P Q E G V
Sbjct: 138 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECG----------------GLVR 181
Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
P+ S +K IS ++ PS + + N + Q+D QEFL +
Sbjct: 182 TDKKPALCKSYQKLIS--EVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCL 239
Query: 315 MDQMHDEL 322
MDQ+H+EL
Sbjct: 240 MDQLHEEL 247
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 40/208 (19%)
Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG- 261
GL N GN CF+N+ +Q L + P + + ++ +FD P G
Sbjct: 261 GLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQE---------------ELNFDNPLGM 305
Query: 262 ----GSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
S + I + G+ +P F+ + F P SG +Q+D QE L+F++
Sbjct: 306 RGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAP----QFSGY-QQQDCQELLAFLL 360
Query: 316 DQMHDELLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
D +H++L +++ + + A+ + E+ WE +N S + DIF
Sbjct: 361 DGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIV-----------DIF 409
Query: 375 GGQLKS-VVKAQGNKASATVQPFLLLHL 401
G KS +V + K S T PF L L
Sbjct: 410 HGLFKSTLVCPECAKISVTFDPFCYLTL 437
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,696,823
Number of Sequences: 539616
Number of extensions: 7024862
Number of successful extensions: 13801
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 13499
Number of HSP's gapped (non-prelim): 278
length of query: 436
length of database: 191,569,459
effective HSP length: 120
effective length of query: 316
effective length of database: 126,815,539
effective search space: 40073710324
effective search space used: 40073710324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)