Query 013780
Match_columns 436
No_of_seqs 147 out of 1640
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 07:19:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013780.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013780hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1177 Long chain fatty acid 100.0 2.1E-61 4.5E-66 435.2 29.1 393 26-435 49-470 (596)
2 KOG1176 Acyl-CoA synthetase [L 100.0 5.1E-60 1.1E-64 455.6 37.6 388 32-434 21-416 (537)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 5.3E-59 1.2E-63 463.2 39.6 390 26-434 10-409 (534)
4 PTZ00342 acyl-CoA synthetase; 100.0 1.6E-58 3.5E-63 470.0 38.8 417 6-435 40-579 (746)
5 PLN02614 long-chain acyl-CoA s 100.0 1E-57 2.3E-62 464.7 38.3 417 6-435 22-505 (666)
6 COG1022 FAA1 Long-chain acyl-C 100.0 2.1E-57 4.6E-62 440.8 33.5 380 27-435 16-458 (613)
7 PLN02574 4-coumarate--CoA liga 100.0 6.3E-56 1.4E-60 445.9 42.3 413 9-435 22-439 (560)
8 COG0365 Acs Acyl-coenzyme A sy 100.0 4.8E-56 1E-60 425.7 35.6 377 27-433 8-403 (528)
9 PLN02861 long-chain-fatty-acid 100.0 3.9E-56 8.5E-61 453.5 37.2 395 27-435 43-502 (660)
10 KOG1256 Long-chain acyl-CoA sy 100.0 6.4E-56 1.4E-60 424.1 34.3 400 24-435 72-536 (691)
11 PLN02736 long-chain acyl-CoA s 100.0 9.4E-56 2E-60 451.4 37.0 395 27-435 44-496 (651)
12 PLN02246 4-coumarate--CoA liga 100.0 2.2E-54 4.8E-59 433.0 41.8 408 7-435 5-421 (537)
13 PRK06334 long chain fatty acid 100.0 5.3E-55 1.2E-59 436.5 37.2 387 27-435 19-419 (539)
14 PF00501 AMP-binding: AMP-bind 100.0 9.9E-56 2.1E-60 429.5 28.2 381 33-435 1-397 (417)
15 PLN02330 4-coumarate--CoA liga 100.0 7.4E-54 1.6E-58 430.0 41.4 411 7-435 10-426 (546)
16 PLN02387 long-chain-fatty-acid 100.0 3.1E-54 6.8E-59 441.3 37.7 398 27-435 58-544 (696)
17 PRK08180 feruloyl-CoA synthase 100.0 6.6E-54 1.4E-58 435.2 37.8 398 11-435 27-449 (614)
18 PRK07788 acyl-CoA synthetase; 100.0 5.6E-54 1.2E-58 431.3 36.5 381 28-434 50-435 (549)
19 PRK08314 long-chain-fatty-acid 100.0 3.4E-53 7.3E-58 425.7 39.4 398 25-435 8-425 (546)
20 PLN02654 acetate-CoA ligase 100.0 1.6E-53 3.5E-58 434.7 37.6 408 18-435 79-522 (666)
21 PRK07529 AMP-binding domain pr 100.0 2.3E-53 5.1E-58 432.0 38.2 396 27-435 25-454 (632)
22 PLN02860 o-succinylbenzoate-Co 100.0 1.5E-53 3.2E-58 428.9 35.5 392 23-435 3-423 (563)
23 PLN02430 long-chain-fatty-acid 100.0 9.2E-53 2E-57 428.0 38.3 416 8-435 21-502 (660)
24 PTZ00216 acyl-CoA synthetase; 100.0 3.9E-53 8.5E-58 434.3 35.6 393 27-435 69-545 (700)
25 PRK13295 cyclohexanecarboxylat 100.0 1.7E-52 3.7E-57 420.2 38.5 385 27-435 24-428 (547)
26 PTZ00237 acetyl-CoA synthetase 100.0 6.6E-53 1.4E-57 428.9 35.9 407 17-435 49-501 (647)
27 PRK04319 acetyl-CoA synthetase 100.0 1.9E-52 4.1E-57 421.8 37.8 388 27-435 42-441 (570)
28 PRK08316 acyl-CoA synthetase; 100.0 3E-52 6.4E-57 417.0 38.3 392 25-435 9-404 (523)
29 PRK12582 acyl-CoA synthetase; 100.0 1.1E-52 2.3E-57 427.1 35.6 386 25-435 47-461 (624)
30 PRK07656 long-chain-fatty-acid 100.0 4.7E-52 1E-56 414.5 38.4 391 27-435 5-401 (513)
31 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 6E-52 1.3E-56 422.4 39.8 404 19-435 49-484 (625)
32 TIGR02316 propion_prpE propion 100.0 4E-52 8.6E-57 423.3 38.4 406 18-435 43-481 (628)
33 PRK09274 peptide synthase; Pro 100.0 4.3E-52 9.3E-57 418.1 37.0 385 27-435 6-429 (552)
34 PRK05605 long-chain-fatty-acid 100.0 8.3E-52 1.8E-56 417.7 39.1 399 26-435 31-454 (573)
35 PRK07638 acyl-CoA synthetase; 100.0 7.5E-52 1.6E-56 410.1 37.9 370 27-435 1-370 (487)
36 PRK05677 long-chain-fatty-acid 100.0 1.2E-51 2.5E-56 415.4 39.8 396 27-435 24-442 (562)
37 COG1021 EntE Peptide arylation 100.0 3.6E-53 7.9E-58 373.6 24.9 383 27-435 28-423 (542)
38 PRK00174 acetyl-CoA synthetase 100.0 1.9E-51 4.2E-56 419.3 41.1 404 19-435 59-492 (637)
39 PRK06839 acyl-CoA synthetase; 100.0 6.9E-52 1.5E-56 411.6 36.7 374 28-435 3-380 (496)
40 PRK07786 long-chain-fatty-acid 100.0 1.6E-51 3.5E-56 412.7 39.2 385 27-435 17-408 (542)
41 PRK03640 O-succinylbenzoic aci 100.0 2.7E-51 5.8E-56 405.9 38.5 368 27-435 2-369 (483)
42 PRK06145 acyl-CoA synthetase; 100.0 3.1E-51 6.8E-56 406.9 38.5 381 27-435 2-382 (497)
43 PRK06087 short chain acyl-CoA 100.0 6E-51 1.3E-55 409.3 40.0 387 27-435 23-419 (547)
44 PRK08315 AMP-binding domain pr 100.0 4.4E-51 9.5E-56 411.6 39.1 392 27-434 16-435 (559)
45 PRK13382 acyl-CoA synthetase; 100.0 4E-51 8.7E-56 409.0 37.9 377 27-435 43-425 (537)
46 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 7.1E-51 1.5E-55 406.8 39.6 383 27-435 23-417 (527)
47 PRK06060 acyl-CoA synthetase; 100.0 1.4E-51 2.9E-56 424.7 35.1 367 27-435 4-374 (705)
48 PRK08633 2-acyl-glycerophospho 100.0 5.8E-51 1.3E-55 443.1 39.3 395 27-435 615-1028(1146)
49 PRK07514 malonyl-CoA synthase; 100.0 1.3E-50 2.8E-55 403.2 38.3 382 26-435 2-386 (504)
50 PRK12583 acyl-CoA synthetase; 100.0 1.2E-50 2.5E-55 408.5 38.4 392 27-435 18-437 (558)
51 PRK06187 long-chain-fatty-acid 100.0 1.9E-50 4.2E-55 403.7 38.5 389 26-435 5-404 (521)
52 PRK07769 long-chain-fatty-acid 100.0 3.4E-51 7.4E-56 417.1 33.3 383 25-435 19-473 (631)
53 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.4E-50 5.3E-55 403.9 38.2 385 27-435 22-426 (538)
54 PRK12492 long-chain-fatty-acid 100.0 4.6E-50 1E-54 403.7 39.0 397 27-435 24-450 (562)
55 PRK10524 prpE propionyl-CoA sy 100.0 3E-50 6.6E-55 410.2 38.0 406 18-435 44-482 (629)
56 PRK05852 acyl-CoA synthetase; 100.0 2.9E-50 6.2E-55 403.1 36.9 390 27-435 16-417 (534)
57 PRK05857 acyl-CoA synthetase; 100.0 1.1E-50 2.3E-55 406.2 33.3 385 27-435 14-411 (540)
58 PRK06155 crotonobetaine/carnit 100.0 9.2E-50 2E-54 399.5 39.9 382 26-435 20-409 (542)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 8.4E-50 1.8E-54 398.5 38.5 390 28-435 1-403 (515)
60 PRK12476 putative fatty-acid-- 100.0 1.1E-50 2.4E-55 411.7 32.2 383 25-435 32-485 (612)
61 PRK07059 Long-chain-fatty-acid 100.0 1.2E-49 2.7E-54 400.5 39.5 402 22-435 18-444 (557)
62 PRK09088 acyl-CoA synthetase; 100.0 8.7E-50 1.9E-54 395.5 37.0 366 34-435 2-370 (488)
63 PRK06178 acyl-CoA synthetase; 100.0 3.3E-49 7.2E-54 398.2 41.4 399 27-435 33-451 (567)
64 PRK07470 acyl-CoA synthetase; 100.0 1.3E-49 2.8E-54 398.1 37.6 385 27-435 7-403 (528)
65 PRK08008 caiC putative crotono 100.0 2E-49 4.4E-54 395.7 38.6 388 27-434 7-406 (517)
66 KOG1180 Acyl-CoA synthetase [L 100.0 1E-50 2.3E-55 371.9 26.6 420 7-435 18-524 (678)
67 PRK12467 peptide synthase; Pro 100.0 2.6E-50 5.6E-55 471.5 37.2 377 27-435 3095-3480(3956)
68 TIGR01734 D-ala-DACP-lig D-ala 100.0 5.6E-50 1.2E-54 398.5 33.5 377 28-435 1-383 (502)
69 PRK06188 acyl-CoA synthetase; 100.0 2.1E-49 4.4E-54 396.2 37.6 382 27-435 12-402 (524)
70 PRK06710 long-chain-fatty-acid 100.0 2.2E-49 4.7E-54 399.3 37.9 395 27-434 24-439 (563)
71 PRK10946 entE enterobactin syn 100.0 2.4E-49 5.3E-54 396.2 37.4 379 27-434 25-417 (536)
72 TIGR02262 benz_CoA_lig benzoat 100.0 4.2E-49 9.1E-54 392.5 38.7 378 30-434 7-392 (508)
73 PRK03584 acetoacetyl-CoA synth 100.0 3.4E-49 7.3E-54 403.9 38.2 401 19-435 79-507 (655)
74 PLN03102 acyl-activating enzym 100.0 2.8E-49 6.1E-54 398.6 36.4 391 26-435 13-429 (579)
75 PLN03052 acetate--CoA ligase; 100.0 7.5E-49 1.6E-53 401.7 39.6 404 19-435 167-598 (728)
76 PRK08043 bifunctional acyl-[ac 100.0 1.5E-49 3.3E-54 409.8 34.5 383 25-435 202-600 (718)
77 PRK06164 acyl-CoA synthetase; 100.0 6.9E-49 1.5E-53 393.9 37.8 391 26-435 9-415 (540)
78 TIGR03205 pimA dicarboxylate-- 100.0 1.3E-48 2.9E-53 391.6 39.7 395 27-435 21-430 (541)
79 PRK13388 acyl-CoA synthetase; 100.0 1.1E-48 2.5E-53 391.4 38.2 372 27-435 3-389 (540)
80 PRK05851 long-chain-fatty-acid 100.0 1.1E-49 2.4E-54 397.6 30.2 372 27-435 1-405 (525)
81 PRK10252 entF enterobactin syn 100.0 3.7E-49 8.1E-54 433.1 37.0 376 27-435 458-846 (1296)
82 PRK13383 acyl-CoA synthetase; 100.0 8.6E-49 1.9E-53 390.8 36.0 367 27-435 35-405 (516)
83 PRK07867 acyl-CoA synthetase; 100.0 3.3E-48 7.2E-53 386.9 39.5 372 27-435 5-390 (529)
84 PRK08751 putative long-chain f 100.0 3E-48 6.6E-53 390.8 38.8 397 27-435 25-446 (560)
85 PRK05620 long-chain-fatty-acid 100.0 2.5E-48 5.5E-53 392.2 37.8 400 27-435 10-439 (576)
86 PRK12316 peptide synthase; Pro 100.0 4.1E-49 8.9E-54 468.2 37.2 379 27-435 511-895 (5163)
87 TIGR03443 alpha_am_amid L-amin 100.0 5.6E-49 1.2E-53 433.4 35.3 392 27-435 236-687 (1389)
88 PRK04813 D-alanine--poly(phosp 100.0 2.5E-48 5.3E-53 386.8 36.3 378 27-435 2-385 (503)
89 PRK07008 long-chain-fatty-acid 100.0 2.6E-48 5.6E-53 389.1 36.6 389 27-434 10-417 (539)
90 TIGR01217 ac_ac_CoA_syn acetoa 100.0 3.2E-48 7E-53 395.2 37.7 402 18-435 79-508 (652)
91 PRK12467 peptide synthase; Pro 100.0 9.3E-49 2E-53 458.5 37.5 379 27-435 1574-1963(3956)
92 PRK08279 long-chain-acyl-CoA s 100.0 6.7E-48 1.5E-52 391.0 38.0 391 25-435 35-448 (600)
93 PRK12316 peptide synthase; Pro 100.0 1.7E-48 3.7E-53 462.9 38.5 379 27-435 2003-2390(5163)
94 PRK08974 long-chain-fatty-acid 100.0 1.6E-47 3.6E-52 385.3 39.5 396 27-435 23-441 (560)
95 PLN02479 acetate-CoA ligase 100.0 1.2E-47 2.7E-52 386.4 37.3 395 26-435 19-439 (567)
96 PRK06018 putative acyl-CoA syn 100.0 2E-47 4.4E-52 383.0 37.3 393 22-434 5-418 (542)
97 PRK13390 acyl-CoA synthetase; 100.0 1.6E-47 3.5E-52 380.4 35.7 376 34-435 4-388 (501)
98 PRK07787 acyl-CoA synthetase; 100.0 1.2E-47 2.7E-52 378.1 33.7 348 37-435 10-359 (471)
99 PRK05850 acyl-CoA synthetase; 100.0 1.1E-47 2.4E-52 388.0 32.8 382 27-435 1-446 (578)
100 PRK13391 acyl-CoA synthetase; 100.0 1.3E-46 2.8E-51 374.8 37.6 375 34-434 4-390 (511)
101 PRK05691 peptide synthase; Val 100.0 2.1E-47 4.5E-52 450.8 37.3 377 27-435 1131-1514(4334)
102 PRK05691 peptide synthase; Val 100.0 1.9E-47 4.2E-52 451.1 36.8 383 27-435 3720-4111(4334)
103 TIGR01733 AA-adenyl-dom amino 100.0 9.2E-47 2E-51 365.5 33.3 352 56-435 1-364 (408)
104 PRK07798 acyl-CoA synthetase; 100.0 7.5E-46 1.6E-50 371.6 38.1 389 27-435 3-417 (533)
105 PRK08162 acyl-CoA synthetase; 100.0 1.1E-45 2.3E-50 371.3 38.7 389 27-434 18-424 (545)
106 PRK09192 acyl-CoA synthetase; 100.0 1.3E-46 2.8E-51 379.9 31.7 386 20-435 16-448 (579)
107 PRK06814 acylglycerophosphoeth 100.0 7E-46 1.5E-50 402.1 38.3 381 27-435 631-1019(1140)
108 KOG1179 Very long-chain acyl-C 100.0 1.2E-45 2.5E-50 340.2 33.0 393 23-433 73-495 (649)
109 PRK07768 long-chain-fatty-acid 100.0 6.9E-46 1.5E-50 372.5 33.5 377 28-435 3-423 (545)
110 PRK12406 long-chain-fatty-acid 100.0 1.7E-45 3.7E-50 366.7 35.4 371 45-435 4-388 (509)
111 PRK08276 long-chain-fatty-acid 100.0 3E-45 6.6E-50 364.3 35.8 365 45-435 2-378 (502)
112 PRK07868 acyl-CoA synthetase; 100.0 4.6E-45 1E-49 385.4 37.2 387 24-435 444-845 (994)
113 PRK09029 O-succinylbenzoic aci 100.0 2.3E-44 4.9E-49 353.8 31.9 338 28-435 3-341 (458)
114 PRK07445 O-succinylbenzoic aci 100.0 1.2E-44 2.6E-49 353.4 28.5 315 53-435 18-333 (452)
115 TIGR01923 menE O-succinylbenzo 100.0 9.2E-43 2E-47 340.5 33.1 329 56-435 1-329 (436)
116 PLN03051 acyl-activating enzym 100.0 9.3E-43 2E-47 345.4 29.4 338 86-435 1-366 (499)
117 KOG1175 Acyl-CoA synthetase [L 100.0 2.9E-41 6.3E-46 324.5 30.2 406 19-435 56-484 (626)
118 PRK08308 acyl-CoA synthetase; 100.0 2.7E-40 5.9E-45 320.4 32.1 287 46-399 2-288 (414)
119 PTZ00297 pantothenate kinase; 100.0 3.7E-39 8E-44 341.1 36.6 376 27-436 427-860 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 5.7E-34 1.2E-38 291.6 33.5 373 27-435 227-605 (642)
121 TIGR03089 conserved hypothetic 100.0 1.4E-27 3E-32 209.8 20.6 220 33-285 2-227 (227)
122 PRK07824 O-succinylbenzoic aci 100.0 1.9E-27 4E-32 226.2 20.8 207 189-435 32-243 (358)
123 KOG3628 Predicted AMP-binding 99.9 1.6E-25 3.4E-30 220.2 26.1 392 27-434 770-1227(1363)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 3.9E-25 8.5E-30 214.5 18.7 203 190-400 73-281 (422)
125 TIGR03335 F390_ftsA coenzyme F 99.9 2.7E-22 5.8E-27 195.0 18.6 201 188-401 82-287 (445)
126 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.6E-21 3.5E-26 185.0 15.9 171 192-378 95-265 (386)
127 COG1541 PaaK Coenzyme F390 syn 99.8 4.6E-17 1E-21 151.1 17.4 209 185-400 83-294 (438)
128 KOG3628 Predicted AMP-binding 99.7 2.6E-16 5.7E-21 156.0 16.7 397 3-419 67-555 (1363)
129 KOG1178 Non-ribosomal peptide 99.7 8.2E-16 1.8E-20 156.6 15.6 313 28-356 37-373 (1032)
130 TIGR02304 aden_form_hyp probab 99.3 8.5E-11 1.8E-15 112.3 14.1 145 195-351 102-251 (430)
131 PF04443 LuxE: Acyl-protein sy 98.9 8.6E-08 1.9E-12 89.7 18.7 204 189-403 86-314 (365)
132 PF03321 GH3: GH3 auxin-respon 96.6 0.0069 1.5E-07 60.4 7.8 88 308-401 266-366 (528)
133 PLN02247 indole-3-acetic acid- 96.5 0.18 4E-06 50.5 17.1 42 307-348 291-332 (606)
134 PLN02620 indole-3-acetic acid- 96.3 0.18 3.8E-06 50.5 15.3 42 307-348 302-343 (612)
135 PLN02249 indole-3-acetic acid- 96.0 0.081 1.8E-06 53.2 11.6 30 189-218 97-127 (597)
136 COG1541 PaaK Coenzyme F390 syn 95.6 0.11 2.3E-06 49.7 10.2 87 53-140 108-196 (438)
137 TIGR02155 PA_CoA_ligase phenyl 90.4 2.7 5.9E-05 40.8 10.7 87 53-140 93-181 (422)
138 TIGR03335 F390_ftsA coenzyme F 90.3 3 6.5E-05 40.9 10.9 82 53-137 104-187 (445)
139 PRK07656 long-chain-fatty-acid 84.1 8.7 0.00019 38.2 10.4 99 40-142 164-271 (513)
140 PRK06187 long-chain-fatty-acid 82.3 17 0.00036 36.2 11.6 99 41-143 166-272 (521)
141 PRK06334 long chain fatty acid 81.6 19 0.00041 36.3 11.6 100 39-141 180-288 (539)
142 PRK08315 AMP-binding domain pr 78.5 21 0.00045 36.1 10.9 85 53-140 217-303 (559)
143 COG0399 WecE Predicted pyridox 75.6 15 0.00033 34.8 8.1 77 64-144 59-145 (374)
144 KOG1177 Long chain fatty acid 74.9 29 0.00063 33.8 9.6 86 52-140 251-338 (596)
145 PRK04319 acetyl-CoA synthetase 74.6 28 0.0006 35.3 10.5 99 41-142 204-311 (570)
146 TIGR03098 ligase_PEP_1 acyl-Co 74.4 41 0.00089 33.4 11.6 86 53-142 179-265 (515)
147 TIGR01923 menE O-succinylbenzo 74.2 20 0.00044 34.7 9.2 85 53-143 129-214 (436)
148 PLN03051 acyl-activating enzym 74.1 31 0.00066 34.4 10.6 99 41-142 118-224 (499)
149 PRK12583 acyl-CoA synthetase; 73.9 38 0.00083 34.1 11.4 85 53-140 219-305 (558)
150 PLN02736 long-chain acyl-CoA s 72.0 58 0.0013 33.7 12.3 102 210-317 77-180 (651)
151 PLN02860 o-succinylbenzoate-Co 71.9 44 0.00095 33.8 11.2 98 40-141 170-275 (563)
152 TIGR01733 AA-adenyl-dom amino 71.9 51 0.0011 31.4 11.3 99 41-142 119-227 (408)
153 PF00501 AMP-binding: AMP-bind 71.8 27 0.00058 33.6 9.3 90 190-289 8-99 (417)
154 TIGR03089 conserved hypothetic 70.4 35 0.00075 29.9 8.8 54 72-127 171-226 (227)
155 PF01041 DegT_DnrJ_EryC1: DegT 69.5 12 0.00025 35.7 6.0 66 64-133 50-120 (363)
156 PRK06188 acyl-CoA synthetase; 69.2 58 0.0012 32.5 11.3 86 53-142 186-271 (524)
157 PLN02565 cysteine synthase 67.4 47 0.001 31.0 9.4 80 53-134 41-121 (322)
158 PRK03640 O-succinylbenzoic aci 67.4 56 0.0012 32.1 10.7 97 41-141 140-244 (483)
159 PRK08308 acyl-CoA synthetase; 66.6 72 0.0016 30.7 11.1 99 40-142 99-206 (414)
160 PRK08314 long-chain-fatty-acid 66.1 58 0.0012 32.7 10.7 98 40-141 188-294 (546)
161 PRK08316 acyl-CoA synthetase; 65.9 66 0.0014 32.0 11.0 85 53-141 189-275 (523)
162 TIGR03590 PseG pseudaminic aci 65.6 77 0.0017 28.8 10.3 67 62-134 18-88 (279)
163 PRK06164 acyl-CoA synthetase; 65.5 66 0.0014 32.3 10.9 98 41-142 180-285 (540)
164 TIGR02379 ECA_wecE TDP-4-keto- 65.4 28 0.00061 33.3 7.7 61 69-133 61-126 (376)
165 PLN03052 acetate--CoA ligase; 64.8 55 0.0012 34.5 10.4 100 190-292 188-289 (728)
166 PRK13295 cyclohexanecarboxylat 64.8 91 0.002 31.4 11.8 98 40-141 195-301 (547)
167 PRK09274 peptide synthase; Pro 64.3 51 0.0011 33.2 9.9 99 191-291 20-121 (552)
168 KOG1176 Acyl-CoA synthetase [L 64.2 64 0.0014 32.5 10.1 92 209-302 43-138 (537)
169 PRK10696 tRNA 2-thiocytidine b 63.9 75 0.0016 28.5 9.8 78 56-133 4-94 (258)
170 PRK08008 caiC putative crotono 63.1 77 0.0017 31.5 10.9 102 190-297 20-123 (517)
171 PRK05850 acyl-CoA synthetase; 62.7 71 0.0015 32.4 10.6 105 190-298 14-124 (578)
172 PRK07638 acyl-CoA synthetase; 62.2 90 0.002 30.7 11.1 87 53-143 161-248 (487)
173 PRK11706 TDP-4-oxo-6-deoxy-D-g 61.8 36 0.00078 32.5 7.8 59 71-133 63-126 (375)
174 cd01445 TST_Repeats Thiosulfat 61.7 22 0.00049 28.3 5.4 42 65-106 81-125 (138)
175 PLN02654 acetate-CoA ligase 60.8 67 0.0015 33.4 10.1 97 191-292 103-201 (666)
176 TIGR01139 cysK cysteine syntha 60.4 77 0.0017 29.1 9.4 65 71-136 48-113 (298)
177 PRK08043 bifunctional acyl-[ac 59.8 91 0.002 32.8 11.0 98 40-140 363-469 (718)
178 PTZ00342 acyl-CoA synthetase; 59.8 1.2E+02 0.0027 32.0 11.9 119 190-318 74-208 (746)
179 TIGR02262 benz_CoA_lig benzoat 59.7 92 0.002 30.9 10.7 99 40-140 159-266 (508)
180 PRK02261 methylaspartate mutas 59.7 36 0.00079 27.1 6.2 48 244-291 14-62 (137)
181 PRK11761 cysM cysteine synthas 59.7 69 0.0015 29.4 8.9 89 43-134 28-117 (296)
182 PTZ00237 acetyl-CoA synthetase 58.9 71 0.0015 33.1 9.9 96 191-291 75-172 (647)
183 PRK05620 long-chain-fatty-acid 58.4 99 0.0021 31.4 10.8 100 40-140 179-286 (576)
184 PLN02387 long-chain-fatty-acid 58.2 75 0.0016 33.3 10.0 103 210-318 105-209 (696)
185 PRK10946 entE enterobactin syn 58.0 1.1E+02 0.0024 30.7 11.0 98 40-141 180-287 (536)
186 PRK00174 acetyl-CoA synthetase 57.7 73 0.0016 32.9 9.8 98 190-292 80-179 (637)
187 KOG0023 Alcohol dehydrogenase, 57.5 61 0.0013 30.0 7.7 68 70-140 173-240 (360)
188 PLN02556 cysteine synthase/L-3 57.5 72 0.0016 30.4 8.8 62 73-134 103-165 (368)
189 PRK07788 acyl-CoA synthetase; 57.1 57 0.0012 32.8 8.8 86 211-298 74-161 (549)
190 PRK03584 acetoacetyl-CoA synth 56.7 78 0.0017 32.8 9.9 96 191-292 98-195 (655)
191 PRK08633 2-acyl-glycerophospho 56.5 1.1E+02 0.0023 34.2 11.5 101 39-142 779-888 (1146)
192 TIGR02188 Ac_CoA_lig_AcsA acet 55.9 77 0.0017 32.6 9.6 98 190-292 70-169 (625)
193 TIGR02275 DHB_AMP_lig 2,3-dihy 55.8 1.2E+02 0.0027 30.2 10.9 98 40-141 181-288 (527)
194 PLN03102 acyl-activating enzym 55.7 1E+02 0.0022 31.4 10.3 95 190-295 27-123 (579)
195 TIGR02370 pyl_corrinoid methyl 55.5 1.3E+02 0.0028 25.7 9.3 82 244-327 95-183 (197)
196 PRK05857 acyl-CoA synthetase; 55.4 73 0.0016 32.0 9.2 95 190-293 27-123 (540)
197 COG0318 CaiC Acyl-CoA syntheta 55.0 1.4E+02 0.003 30.1 11.0 103 40-143 169-281 (534)
198 PLN02246 4-coumarate--CoA liga 54.7 98 0.0021 31.0 10.0 99 190-297 36-136 (537)
199 PRK08279 long-chain-acyl-CoA s 54.7 1.2E+02 0.0026 30.9 10.8 86 53-142 217-304 (600)
200 PRK10252 entF enterobactin syn 54.6 1.2E+02 0.0026 34.4 11.6 98 40-140 596-703 (1296)
201 PLN03013 cysteine synthase 54.3 91 0.002 30.3 8.9 65 71-135 165-230 (429)
202 TIGR01217 ac_ac_CoA_syn acetoa 54.2 89 0.0019 32.4 9.7 94 192-291 99-194 (652)
203 PLN02574 4-coumarate--CoA liga 54.2 1.1E+02 0.0023 31.0 10.2 99 190-297 52-153 (560)
204 PRK07529 AMP-binding domain pr 54.1 80 0.0017 32.6 9.4 98 190-290 38-136 (632)
205 COG4009 Uncharacterized protei 54.0 65 0.0014 22.6 5.6 66 53-129 8-76 (88)
206 KOG1179 Very long-chain acyl-C 53.3 56 0.0012 32.7 7.2 86 54-143 261-348 (649)
207 PRK13388 acyl-CoA synthetase; 52.9 1E+02 0.0023 30.9 9.8 96 191-297 15-113 (540)
208 TIGR01136 cysKM cysteine synth 52.5 1.2E+02 0.0025 27.9 9.2 65 70-135 48-113 (299)
209 PRK11658 UDP-4-amino-4-deoxy-L 52.2 72 0.0016 30.5 8.1 63 65-131 59-126 (379)
210 COG1167 ARO8 Transcriptional r 51.9 1.4E+02 0.003 29.5 10.1 58 76-136 176-236 (459)
211 PRK07787 acyl-CoA synthetase; 51.5 1.8E+02 0.0039 28.5 11.1 97 40-141 126-231 (471)
212 PRK07470 acyl-CoA synthetase; 51.0 1.6E+02 0.0034 29.4 10.7 101 41-142 162-270 (528)
213 PRK05852 acyl-CoA synthetase; 50.9 2.6E+02 0.0057 27.9 12.4 87 53-142 194-283 (534)
214 PLN02330 4-coumarate--CoA liga 50.5 1.1E+02 0.0023 30.9 9.5 98 190-296 41-140 (546)
215 PRK06814 acylglycerophosphoeth 50.4 1.6E+02 0.0035 32.9 11.6 99 40-141 791-898 (1140)
216 COG1022 FAA1 Long-chain acyl-C 50.0 1.4E+02 0.0031 30.6 10.0 101 38-142 187-295 (613)
217 PLN00011 cysteine synthase 49.9 1.4E+02 0.003 27.9 9.4 64 71-135 59-124 (323)
218 cd01449 TST_Repeat_2 Thiosulfa 49.8 32 0.00069 26.2 4.4 41 65-105 64-104 (118)
219 PRK06155 crotonobetaine/carnit 49.5 94 0.002 31.3 8.9 87 211-299 46-134 (542)
220 PF00455 DeoRC: DeoR C termina 49.4 1.1E+02 0.0024 25.1 7.7 92 254-354 13-112 (161)
221 COG2885 OmpA Outer membrane pr 49.4 51 0.0011 27.9 5.9 58 27-85 99-160 (190)
222 PRK06839 acyl-CoA synthetase; 48.9 2.6E+02 0.0056 27.4 11.9 99 40-142 147-254 (496)
223 PRK07798 acyl-CoA synthetase; 48.3 1.7E+02 0.0036 29.1 10.5 97 191-298 17-115 (533)
224 cd06448 L-Ser-dehyd Serine deh 48.1 1.9E+02 0.0041 26.8 10.0 61 74-135 46-106 (316)
225 PRK07008 long-chain-fatty-acid 47.8 1.3E+02 0.0028 30.2 9.6 87 53-141 194-282 (539)
226 TIGR01734 D-ala-DACP-lig D-ala 47.6 2.1E+02 0.0046 28.2 11.0 85 53-140 159-246 (502)
227 PRK09188 serine/threonine prot 47.4 8.5 0.00018 36.5 0.9 12 424-435 207-218 (365)
228 PRK05605 long-chain-fatty-acid 47.4 98 0.0021 31.4 8.7 97 190-297 45-143 (573)
229 TIGR03588 PseC UDP-4-keto-6-de 47.3 98 0.0021 29.5 8.2 65 65-132 55-127 (380)
230 cd01519 RHOD_HSP67B2 Member of 46.9 44 0.00096 24.7 4.7 52 54-105 37-92 (106)
231 TIGR01138 cysM cysteine syntha 46.6 1.7E+02 0.0038 26.7 9.3 61 73-134 52-113 (290)
232 PRK15407 lipopolysaccharide bi 46.5 89 0.0019 30.6 7.8 55 75-133 107-166 (438)
233 PF06543 Lac_bphage_repr: Lact 46.3 15 0.00033 22.8 1.5 23 312-334 22-44 (49)
234 PRK14807 histidinol-phosphate 46.0 2.6E+02 0.0056 26.2 11.1 55 76-133 97-155 (351)
235 TIGR02316 propion_prpE propion 45.9 73 0.0016 32.8 7.6 97 190-291 65-163 (628)
236 COG0365 Acs Acyl-coenzyme A sy 45.8 1.4E+02 0.003 30.1 9.0 86 210-297 39-126 (528)
237 cd00640 Trp-synth-beta_II Tryp 45.1 2.2E+02 0.0047 25.1 9.8 65 71-136 42-106 (244)
238 PRK05677 long-chain-fatty-acid 45.1 1.6E+02 0.0034 29.8 9.7 94 191-295 38-134 (562)
239 PRK07476 eutB threonine dehydr 44.9 1.4E+02 0.0031 27.7 8.7 53 84-136 71-123 (322)
240 PRK13391 acyl-CoA synthetase; 44.6 1.8E+02 0.004 28.8 10.1 98 190-296 10-109 (511)
241 PLN02861 long-chain-fatty-acid 44.6 1.3E+02 0.0027 31.4 9.1 87 210-298 76-164 (660)
242 TIGR03443 alpha_am_amid L-amin 44.4 1.2E+02 0.0026 34.8 9.6 99 190-290 249-349 (1389)
243 TIGR03208 cyc_hxne_CoA_lg cycl 44.3 2.7E+02 0.0058 27.9 11.2 97 40-140 193-298 (538)
244 PF09269 DUF1967: Domain of un 44.1 31 0.00067 23.7 3.0 31 54-84 32-62 (69)
245 PRK05851 long-chain-fatty-acid 43.8 2.5E+02 0.0053 28.1 10.8 92 40-134 150-253 (525)
246 TIGR03595 Obg_CgtA_exten Obg f 43.8 28 0.00061 23.9 2.8 21 65-85 43-63 (69)
247 PLN02614 long-chain acyl-CoA s 43.6 1.2E+02 0.0027 31.5 8.9 87 210-298 78-166 (666)
248 PRK06702 O-acetylhomoserine am 43.6 1.2E+02 0.0026 29.7 8.1 34 99-133 121-154 (432)
249 PLN02479 acetate-CoA ligase 43.3 2.4E+02 0.0052 28.5 10.8 95 190-295 33-129 (567)
250 COG2236 Predicted phosphoribos 43.2 39 0.00085 28.7 4.1 32 53-84 5-36 (192)
251 TIGR02372 4_coum_CoA_lig 4-cou 43.1 3.1E+02 0.0067 26.3 11.2 83 53-141 113-199 (386)
252 COG0031 CysK Cysteine synthase 42.9 2.2E+02 0.0048 26.2 9.1 61 73-134 55-116 (300)
253 cd01561 CBS_like CBS_like: Thi 42.6 2E+02 0.0043 26.2 9.1 64 72-136 45-109 (291)
254 PRK11493 sseA 3-mercaptopyruva 42.5 40 0.00087 30.7 4.5 53 53-105 200-257 (281)
255 PLN02550 threonine dehydratase 42.5 3.6E+02 0.0078 27.6 11.4 60 76-138 156-215 (591)
256 PLN02430 long-chain-fatty-acid 42.3 2.1E+02 0.0045 29.8 10.2 102 211-317 76-179 (660)
257 PRK12476 putative fatty-acid-- 42.3 3E+02 0.0064 28.2 11.3 104 190-297 47-156 (612)
258 PRK07769 long-chain-fatty-acid 41.9 3E+02 0.0065 28.3 11.4 102 191-296 35-142 (631)
259 PF00818 Ice_nucleation: Ice n 41.9 12 0.00026 17.3 0.5 9 342-350 1-9 (16)
260 PRK07514 malonyl-CoA synthase; 41.4 1.4E+02 0.003 29.5 8.6 86 210-297 27-114 (504)
261 PRK08162 acyl-CoA synthetase; 41.2 1.1E+02 0.0024 30.7 7.9 85 211-297 43-129 (545)
262 KOG0633 Histidinol phosphate a 40.5 46 0.00099 29.6 4.1 70 65-134 96-168 (375)
263 PRK10524 prpE propionyl-CoA sy 40.3 96 0.0021 31.9 7.4 97 190-291 66-164 (629)
264 PRK06087 short chain acyl-CoA 40.2 1.6E+02 0.0035 29.5 8.9 78 211-290 49-128 (547)
265 PRK08276 long-chain-fatty-acid 40.0 1.5E+02 0.0032 29.3 8.6 86 210-297 10-97 (502)
266 TIGR01137 cysta_beta cystathio 40.0 1.9E+02 0.0041 28.4 9.1 61 73-134 55-116 (454)
267 PRK10411 DNA-binding transcrip 39.9 2.1E+02 0.0046 25.3 8.5 92 254-354 87-185 (240)
268 PF03808 Glyco_tran_WecB: Glyc 39.8 50 0.0011 27.5 4.3 75 260-340 4-79 (172)
269 COG1064 AdhP Zn-dependent alco 39.7 88 0.0019 29.3 6.2 62 69-134 157-218 (339)
270 PLN02723 3-mercaptopyruvate su 39.5 49 0.0011 30.8 4.6 52 54-105 238-295 (320)
271 PRK05939 hypothetical protein; 38.8 3.1E+02 0.0067 26.4 10.1 56 76-133 83-138 (397)
272 PRK09088 acyl-CoA synthetase; 38.6 2.1E+02 0.0047 28.0 9.4 94 190-292 8-103 (488)
273 PRK13383 acyl-CoA synthetase; 38.5 1.5E+02 0.0033 29.5 8.4 86 211-298 60-147 (516)
274 PRK06381 threonine synthase; V 38.2 1.2E+02 0.0025 28.2 6.9 88 43-136 32-119 (319)
275 PRK07867 acyl-CoA synthetase; 38.1 3.5E+02 0.0076 27.1 10.9 97 40-140 150-255 (529)
276 TIGR00936 ahcY adenosylhomocys 37.6 1.8E+02 0.0038 28.2 8.1 55 77-131 30-86 (406)
277 PRK08751 putative long-chain f 37.6 1.4E+02 0.0031 30.0 8.1 95 191-296 39-136 (560)
278 PRK13390 acyl-CoA synthetase; 36.7 2.8E+02 0.0062 27.3 10.0 94 190-292 10-105 (501)
279 PRK07059 Long-chain-fatty-acid 36.6 1.7E+02 0.0036 29.5 8.4 85 210-296 47-133 (557)
280 PRK06382 threonine dehydratase 36.3 2.1E+02 0.0045 27.7 8.5 54 84-137 77-130 (406)
281 PRK06145 acyl-CoA synthetase; 35.8 4.3E+02 0.0094 25.9 11.2 86 53-142 167-254 (497)
282 PRK02261 methylaspartate mutas 35.3 2.3E+02 0.005 22.5 7.7 43 92-134 20-62 (137)
283 KOG1138 Predicted cleavage and 35.1 50 0.0011 32.2 3.9 74 68-141 407-481 (653)
284 PLN02356 phosphateglycerate ki 34.9 2.4E+02 0.0051 27.5 8.5 62 71-133 95-157 (423)
285 PRK06178 acyl-CoA synthetase; 34.5 1.7E+02 0.0038 29.5 8.2 86 211-298 58-145 (567)
286 PRK07768 long-chain-fatty-acid 34.5 3.2E+02 0.0069 27.4 10.0 94 40-136 150-256 (545)
287 cd00615 Orn_deC_like Ornithine 34.4 1.9E+02 0.0041 26.3 7.7 55 76-133 96-161 (294)
288 cd01448 TST_Repeat_1 Thiosulfa 34.3 1.2E+02 0.0027 23.1 5.6 40 66-105 66-106 (122)
289 PRK03321 putative aminotransfe 34.1 3.1E+02 0.0066 25.6 9.3 53 76-132 95-151 (352)
290 PRK09162 hypoxanthine-guanine 34.0 1.2E+02 0.0026 25.5 5.7 47 52-99 14-60 (181)
291 PTZ00216 acyl-CoA synthetase; 33.9 1.9E+02 0.004 30.4 8.4 88 209-298 119-208 (700)
292 PLN03026 histidinol-phosphate 33.6 4.1E+02 0.0089 25.3 10.1 10 77-86 125-134 (380)
293 PF07994 NAD_binding_5: Myo-in 33.4 3.9E+02 0.0084 24.6 9.2 71 56-128 127-227 (295)
294 PRK13382 acyl-CoA synthetase; 33.2 2.6E+02 0.0055 28.1 9.1 83 211-295 68-152 (537)
295 PRK10717 cysteine synthase A; 33.0 3E+02 0.0064 25.7 8.8 63 72-135 56-119 (330)
296 PRK06018 putative acyl-CoA syn 32.3 1.6E+02 0.0035 29.5 7.5 85 210-296 38-124 (542)
297 PRK08180 feruloyl-CoA synthase 31.8 4E+02 0.0086 27.3 10.3 100 40-140 207-318 (614)
298 PRK12406 long-chain-fatty-acid 31.8 5.1E+02 0.011 25.5 10.9 68 73-141 190-258 (509)
299 PRK13237 tyrosine phenol-lyase 31.5 3.1E+02 0.0068 27.0 8.7 69 53-126 76-174 (460)
300 KOG0025 Zn2+-binding dehydroge 31.5 1.3E+02 0.0028 27.5 5.5 64 75-138 157-221 (354)
301 PRK07786 long-chain-fatty-acid 31.4 2.3E+02 0.005 28.4 8.4 83 211-295 42-126 (542)
302 PRK08813 threonine dehydratase 31.1 3.8E+02 0.0082 25.4 9.0 55 83-137 84-138 (349)
303 PRK06060 acyl-CoA synthetase; 31.0 2.1E+02 0.0045 30.0 8.2 93 190-294 19-113 (705)
304 PRK09224 threonine dehydratase 31.0 3.2E+02 0.0069 27.4 9.0 54 84-137 72-125 (504)
305 TIGR01127 ilvA_1Cterm threonin 31.0 3.7E+02 0.008 25.6 9.3 54 83-136 51-104 (380)
306 PRK09331 Sep-tRNA:Cys-tRNA syn 30.9 2.7E+02 0.0059 26.5 8.4 55 76-133 99-165 (387)
307 cd01529 4RHOD_Repeats Member o 30.7 1.5E+02 0.0032 21.4 5.2 49 54-105 34-82 (96)
308 PRK10287 thiosulfate:cyanide s 30.6 1.8E+02 0.0039 21.8 5.6 50 53-109 41-90 (104)
309 PF02729 OTCace_N: Aspartate/o 30.5 2.8E+02 0.0062 22.2 11.0 92 60-152 17-122 (142)
310 PRK12492 long-chain-fatty-acid 30.2 2.6E+02 0.0057 28.2 8.6 82 210-293 48-132 (562)
311 smart00450 RHOD Rhodanese Homo 29.3 2.1E+02 0.0045 20.2 5.9 40 66-105 43-82 (100)
312 PF09664 DUF2399: Protein of u 29.3 3.1E+02 0.0068 22.3 9.6 76 258-340 63-141 (152)
313 cd01562 Thr-dehyd Threonine de 29.3 2.4E+02 0.0053 25.7 7.5 56 80-136 66-121 (304)
314 cd03466 Nitrogenase_NifN_2 Nit 29.1 4.5E+02 0.0099 25.6 9.6 56 78-134 299-358 (429)
315 PF06564 YhjQ: YhjQ protein; 28.9 3E+02 0.0066 24.4 7.5 80 34-114 69-152 (243)
316 TIGR02618 tyr_phenol_ly tyrosi 28.5 2.7E+02 0.0059 27.3 7.7 68 53-125 69-166 (450)
317 cd01563 Thr-synth_1 Threonine 28.3 2.1E+02 0.0045 26.6 6.9 88 43-136 39-126 (324)
318 PRK12483 threonine dehydratase 28.3 4.9E+02 0.011 26.2 9.7 55 84-138 89-143 (521)
319 PRK06710 long-chain-fatty-acid 28.2 1.9E+02 0.0042 29.1 7.2 82 211-294 49-132 (563)
320 PRK06234 methionine gamma-lyas 27.9 5.5E+02 0.012 24.7 9.9 25 324-349 324-348 (400)
321 PRK05638 threonine synthase; V 27.5 2.1E+02 0.0046 28.0 7.0 91 43-139 81-171 (442)
322 KOG1250 Threonine/serine dehyd 27.1 2.3E+02 0.0051 27.1 6.6 54 84-137 118-171 (457)
323 PRK04813 D-alanine--poly(phosp 27.0 6E+02 0.013 24.8 11.4 85 53-140 161-248 (503)
324 PRK08246 threonine dehydratase 27.0 4.6E+02 0.01 24.2 8.9 59 78-137 67-125 (310)
325 cd04618 CBS_pair_5 The CBS dom 26.9 2.5E+02 0.0054 20.3 6.8 29 106-134 52-80 (98)
326 COG4821 Uncharacterized protei 26.8 2.1E+02 0.0045 24.5 5.7 56 60-136 85-141 (243)
327 cd02070 corrinoid_protein_B12- 26.8 4E+02 0.0087 22.7 11.1 88 236-325 84-179 (201)
328 PRK08574 cystathionine gamma-s 26.6 2.6E+02 0.0057 26.8 7.4 26 323-349 310-335 (385)
329 PF04122 CW_binding_2: Putativ 26.4 2.5E+02 0.0054 20.2 7.6 69 60-131 8-77 (92)
330 PRK06721 threonine synthase; R 26.3 2.6E+02 0.0057 26.4 7.3 54 84-137 79-133 (352)
331 TIGR01124 ilvA_2Cterm threonin 26.3 4.4E+02 0.0095 26.4 9.0 53 84-136 69-121 (499)
332 PLN02723 3-mercaptopyruvate su 26.1 1.5E+02 0.0033 27.5 5.6 48 65-112 89-138 (320)
333 PRK09029 O-succinylbenzoic aci 26.0 2.7E+02 0.0058 27.1 7.7 79 211-291 28-108 (458)
334 PRK15400 lysine decarboxylase 25.9 2.2E+02 0.0047 29.9 6.9 58 76-136 232-308 (714)
335 cd01974 Nitrogenase_MoFe_beta 25.9 4.9E+02 0.011 25.4 9.3 46 78-124 302-351 (435)
336 cd01520 RHOD_YbbB Member of th 25.8 2.9E+02 0.0063 21.3 6.4 39 74-112 81-120 (128)
337 PF05221 AdoHcyase: S-adenosyl 25.7 2.9E+02 0.0064 24.9 6.8 55 77-131 41-97 (268)
338 cd06447 D-Ser-dehyd D-Serine d 25.6 2.7E+02 0.0058 27.0 7.2 57 82-138 136-192 (404)
339 PF06277 EutA: Ethanolamine ut 25.6 4.9E+02 0.011 25.7 8.8 65 27-93 353-422 (473)
340 PRK09192 acyl-CoA synthetase; 25.6 3.7E+02 0.0079 27.3 8.7 87 210-298 48-143 (579)
341 PRK11493 sseA 3-mercaptopyruva 25.3 1.7E+02 0.0037 26.6 5.6 50 63-112 71-122 (281)
342 PRK08974 long-chain-fatty-acid 25.2 2.9E+02 0.0062 27.8 7.8 82 211-294 48-132 (560)
343 PF00291 PALP: Pyridoxal-phosp 25.1 3.3E+02 0.0072 24.7 7.7 56 79-135 56-111 (306)
344 cd02067 B12-binding B12 bindin 25.0 3.1E+02 0.0067 20.8 6.9 37 98-134 22-58 (119)
345 TIGR02981 phageshock_pspE phag 24.8 2.6E+02 0.0057 20.7 5.6 50 53-109 39-88 (101)
346 PRK14665 mnmA tRNA-specific 2- 24.7 2.5E+02 0.0055 26.6 6.7 59 76-134 2-68 (360)
347 PRK10595 SOS cell division inh 24.6 2.9E+02 0.0062 22.9 6.1 65 68-132 70-140 (164)
348 PLN02238 hypoxanthine phosphor 24.6 2.1E+02 0.0045 24.3 5.6 44 53-97 10-53 (189)
349 PRK12582 acyl-CoA synthetase; 24.4 2.4E+02 0.0052 29.0 7.2 80 210-291 79-165 (624)
350 PRK07409 threonine synthase; V 24.1 2.8E+02 0.0061 26.2 7.0 53 84-136 82-135 (353)
351 PF07722 Peptidase_C26: Peptid 23.8 86 0.0019 27.3 3.2 35 95-131 29-63 (217)
352 cd07050 BMC_EutL_repeat2 ethan 23.6 1.3E+02 0.0027 21.4 3.2 39 69-107 4-43 (87)
353 TIGR02991 ectoine_eutB ectoine 23.6 5.1E+02 0.011 24.0 8.5 52 85-136 72-123 (317)
354 PRK07503 methionine gamma-lyas 23.5 3.7E+02 0.0079 26.0 7.8 54 76-132 101-156 (403)
355 TIGR01501 MthylAspMutase methy 23.1 3.5E+02 0.0076 21.5 6.2 80 245-327 13-100 (134)
356 PRK09629 bifunctional thiosulf 23.0 1.5E+02 0.0033 30.5 5.2 48 64-111 208-256 (610)
357 PRK08638 threonine dehydratase 22.8 5.2E+02 0.011 24.2 8.4 54 84-137 79-132 (333)
358 TIGR02035 D_Ser_am_lyase D-ser 22.6 3.2E+02 0.0069 26.7 7.1 58 82-139 154-211 (431)
359 COG0853 PanD Aspartate 1-decar 22.5 1.1E+02 0.0024 23.6 3.1 81 25-136 23-111 (126)
360 PF08479 POTRA_2: POTRA domain 22.5 1.3E+02 0.0029 20.7 3.5 25 52-76 28-52 (76)
361 TIGR02080 O_succ_thio_ly O-suc 22.5 3.7E+02 0.0081 25.7 7.6 25 324-349 308-332 (382)
362 cd01524 RHOD_Pyr_redox Member 22.4 2.9E+02 0.0063 19.5 5.8 49 53-110 34-82 (90)
363 PRK10802 peptidoglycan-associa 22.0 1.7E+02 0.0037 24.4 4.5 53 29-81 87-143 (173)
364 TIGR02822 adh_fam_2 zinc-bindi 21.9 3.7E+02 0.008 24.9 7.4 58 71-132 158-215 (329)
365 PTZ00297 pantothenate kinase; 21.9 6.4E+02 0.014 29.3 10.1 100 210-318 456-556 (1452)
366 COG2897 SseA Rhodanese-related 21.7 1.9E+02 0.0042 26.4 5.1 55 53-107 202-262 (285)
367 PF12646 DUF3783: Domain of un 21.6 2.5E+02 0.0054 18.4 4.6 32 63-95 13-44 (58)
368 cd00401 AdoHcyase S-adenosyl-L 21.6 4.9E+02 0.011 25.3 8.0 55 77-131 34-90 (413)
369 KOG1794 N-Acetylglucosamine ki 21.6 2.8E+02 0.0062 25.3 5.8 83 308-396 68-152 (336)
370 PF01276 OKR_DC_1: Orn/Lys/Arg 21.5 1.9E+02 0.0042 28.0 5.3 58 76-136 103-179 (417)
371 PF08845 SymE_toxin: Toxin Sym 21.4 1.1E+02 0.0023 20.2 2.5 22 68-89 30-51 (57)
372 PRK08134 O-acetylhomoserine am 21.2 4E+02 0.0086 26.1 7.6 25 324-349 354-378 (433)
373 PRK07445 O-succinylbenzoic aci 21.1 3.8E+02 0.0082 26.2 7.6 80 210-291 18-100 (452)
374 COG2805 PilT Tfp pilus assembl 21.1 6.1E+02 0.013 23.6 7.9 98 27-125 140-246 (353)
375 TIGR01286 nifK nitrogenase mol 21.1 7.4E+02 0.016 24.9 9.5 46 78-124 362-411 (515)
376 TIGR01747 diampropi_NH3ly diam 21.1 3.2E+02 0.0069 26.1 6.7 58 81-138 95-152 (376)
377 COG1021 EntE Peptide arylation 21.0 6.7E+02 0.015 24.4 8.4 120 190-323 41-166 (542)
378 PF02073 Peptidase_M29: Thermo 21.0 2.5E+02 0.0053 27.2 5.9 50 60-109 3-56 (398)
379 TIGR01203 HGPRTase hypoxanthin 20.9 3E+02 0.0065 22.7 5.8 20 55-74 3-22 (166)
380 PRK07868 acyl-CoA synthetase; 20.9 5.1E+02 0.011 28.6 9.1 69 73-142 640-710 (994)
381 cd02070 corrinoid_protein_B12- 20.8 5.3E+02 0.011 21.9 10.2 82 53-134 49-141 (201)
382 PRK15399 lysine decarboxylase 20.8 3.1E+02 0.0066 28.8 6.8 58 76-136 232-308 (713)
383 cd01533 4RHOD_Repeat_2 Member 20.7 3.2E+02 0.007 20.2 5.6 46 53-105 47-92 (109)
384 PF11974 MG1: Alpha-2-macroglo 20.6 65 0.0014 23.9 1.5 35 366-400 23-60 (97)
385 TIGR03201 dearomat_had 6-hydro 20.6 4.6E+02 0.01 24.4 7.8 58 71-132 159-216 (349)
386 PRK10719 eutA reactivating fac 20.3 7.3E+02 0.016 24.6 8.8 66 27-94 354-424 (475)
387 PRK03317 histidinol-phosphate 20.3 7.2E+02 0.016 23.3 9.9 19 202-220 231-249 (368)
388 PRK09802 DNA-binding transcrip 20.2 6.5E+02 0.014 22.7 8.6 91 255-354 101-199 (269)
389 PRK06815 hypothetical protein; 20.1 6.2E+02 0.013 23.4 8.4 54 84-137 72-125 (317)
390 PRK08198 threonine dehydratase 20.0 5.6E+02 0.012 24.7 8.3 58 79-137 70-127 (404)
391 TIGR03205 pimA dicarboxylate-- 20.0 3.9E+02 0.0084 26.7 7.6 79 211-291 46-126 (541)
No 1
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-61 Score=435.15 Aligned_cols=393 Identities=25% Similarity=0.337 Sum_probs=344.1
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
+.|+++.|+..+++.||+.|.+....+.++||+||.+.++++|..|.+.|+++||+|++..||+.+|+.++|||.++|.+
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v 128 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLV 128 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceE
Confidence 47899999999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccch-----HHHHhhcC------------------CCcEEeccCCcccccccc
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPEL-----WDKVKDLN------------------LPAVLLGSKDKVSSSGLI 162 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 162 (436)
.+++||.+...++++.|++.+++++|..+.+ .+.++++. ...+++..++
T Consensus 129 ~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed-------- 200 (596)
T KOG1177|consen 129 LVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED-------- 200 (596)
T ss_pred EeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC--------
Confidence 9999999999999999999999999988532 33333332 1233333321
Q ss_pred ccCcccchhhHHhhhcCCCCC----CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEE
Q 013780 163 SRSSKIVSFHDLIELSGSVTD----IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVV 238 (436)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~ 238 (436)
.+..+...+++.+.....+.. .......+++.+.|.|||||||.||++.+||-|+++++........+... +++
T Consensus 201 ~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~--~~i 278 (596)
T KOG1177|consen 201 HPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEK--HRI 278 (596)
T ss_pred CcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcc--eEE
Confidence 456677788888876654211 11234568999999999999999999999999999999998888888664 899
Q ss_pred EechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEec
Q 013780 239 LCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSG 317 (436)
Q Consensus 239 ~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (436)
++..|++|.+|.....+++|..|++++++ +.|++...++.|++++||.++++|+++..|++.+.....+++++|.++.|
T Consensus 279 ~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vig 358 (596)
T KOG1177|consen 279 CIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIG 358 (596)
T ss_pred EecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeC
Confidence 99999999999888999999999999997 67999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCC-CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEE
Q 013780 318 AAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIW 396 (436)
Q Consensus 318 g~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~ 396 (436)
|+++++++++.+.+...=..+.. .||+||++..++.....+ ...+..++|+.+++.|..|+| ..|..++.|.+||||
T Consensus 359 Ga~~s~eLlk~iv~~~~m~~i~v-~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~ 436 (596)
T KOG1177|consen 359 GAPVSPELLKLIVNQMNMKDIAV-AYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELL 436 (596)
T ss_pred CCCCCHHHHHHHHHhhCceeeEE-EeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEE
Confidence 99999999999999765233455 999999998777654443 256788999999999999999 699999999999999
Q ss_pred EecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 397 VRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 397 v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+||+++|.| ||++++.|.++.+ .+.|++|||.|.
T Consensus 437 iRGY~tMl~--Ywg~~~kT~eti~---~drW~~TGDi~~ 470 (596)
T KOG1177|consen 437 IRGYSTMLG--YWGEEEKTKETIG---NDRWYDTGDIAV 470 (596)
T ss_pred EEechhhee--ecCCcccchhhcc---cccceecCceEE
Confidence 999999999 9999999999885 788999999863
No 2
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-60 Score=455.62 Aligned_cols=388 Identities=38% Similarity=0.604 Sum_probs=322.6
Q ss_pred HHhhhcccCCCc-eEEEeCCC-CccccHHHHHHHHHHHHHHHHhcC--CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 32 FLFRNSASYSSK-LALIDADS-DESLSFSQFKSIVIKVSHSFRHLG--ITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 32 ~l~~~~~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g--v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
.+.+.+..++++ +.+++... |..+||.|+++++.++|..|.++| +++||+|++++||++++.++++||+.+|+++.
T Consensus 21 ~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~ 100 (537)
T KOG1176|consen 21 FLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLN 100 (537)
T ss_pred cccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccc
Confidence 334444444444 66666543 699999999999999999999776 89999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 108 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
++||.+...++.+.++.++++++|++....+.+.... .+.+++..... .............+..+..... +.
T Consensus 101 ~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~ 176 (537)
T KOG1176|consen 101 PLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEG--VISISDLVEDLDAFEDLMPEGL--PD 176 (537)
T ss_pred ccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccC--ccccccccccccchhhccccCC--Cc
Confidence 9999999999999999999999999999888775554 22232222100 0000011111111344333332 22
Q ss_pred CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
. ......+++++++|||||||.||||++||+++..+.......+..... ++.++.+|++|.+|+...+.+.+..|++
T Consensus 177 ~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~--~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ 253 (537)
T KOG1176|consen 177 G-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSD--DVYLCTLPLFHIYGLITLLLSLLAGGTT 253 (537)
T ss_pred c-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCC--ceEEEechHHHHhHHHHHHHHHHhCCce
Confidence 2 455677999999999999999999999999999987765555555443 9999999999999998777778888888
Q ss_pred EEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 264 v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
++..+.|++..+++.+++|++|++.++|.++..|++.+.....+++++|.+.+||+++++++.+++++++|...+.+ .|
T Consensus 254 ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q-~Y 332 (537)
T KOG1176|consen 254 IICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ-GY 332 (537)
T ss_pred EEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEE-ee
Confidence 88889999999999999999999999999999999998777789999999999999999999999999999899999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccc
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 423 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~ 423 (436)
|+||+++.++.+...+. .+++++|+++++++.+|.+ ++|+.+++++.||||++|+++|.| ||+||++|++.|.
T Consensus 333 GmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkG--Y~~NpeaT~~~~~--- 405 (537)
T KOG1176|consen 333 GMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKG--YLKNPEATKEAFD--- 405 (537)
T ss_pred ccccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchh--hcCChHHHHhhcc---
Confidence 99999988887776643 6899999999988888888 799999999999999999999999 9999999999883
Q ss_pred cCCeeecCCCC
Q 013780 424 TDSFIRGKDQQ 434 (436)
Q Consensus 424 ~~~~~~tgD~~ 434 (436)
.+|||+|||+|
T Consensus 406 ~~GW~~TGDiG 416 (537)
T KOG1176|consen 406 DDGWFHTGDLG 416 (537)
T ss_pred cCCccccCceE
Confidence 33999999986
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.3e-59 Score=463.19 Aligned_cols=390 Identities=35% Similarity=0.503 Sum_probs=327.3
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
..++.+.|.+.++.+|+++|+++.+.+.++||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||+++|++
T Consensus 10 ~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav 89 (534)
T COG0318 10 ELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAV 89 (534)
T ss_pred cccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEE
Confidence 37899999999999999999999843334999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC---CCcEEeccCCccccccccccCccc--chhhHHhhhcCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKI--VSFHDLIELSGS 180 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 180 (436)
++|+||.+...++.++++.+++++++++....+.+.... .....+.... ..... ..+++.......
T Consensus 90 ~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 160 (534)
T COG0318 90 AVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVG---------DADDRLPITLEALAAEGPG 160 (534)
T ss_pred EeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecc---------cccccccccHHHHhhccCC
Confidence 999999999999999999999999999987444333332 1111111110 01111 245555333321
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhh--ccCCCCcEEEechhHHHHHHHHHHHHhhc
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE--LVGELDHVVLCVLPMFHVFGLSVILYDQL 258 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 258 (436)
.........++++++++|||||||.||+|++||+|+..+...+..... +... |++++++|++|.+|+...++.++
T Consensus 161 -~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~--d~~l~~lPl~H~~Gl~~~~~~~~ 237 (534)
T COG0318 161 -PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPD--DVVLSWLPLFHIFGLIVGLLAPL 237 (534)
T ss_pred -cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCC--ceEEEecChHHHHHHHHHHHHHH
Confidence 112222267999999999999999999999999999999887777766 4333 88999999999999997788889
Q ss_pred cCCcEEEEcC--CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCc-ceEEEecCCCCcHHHHHHHHhhCCC
Q 013780 259 QKGNCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISS-LKLVGSGAAPLGKELMEDCQKNIPG 335 (436)
Q Consensus 259 ~~G~~v~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~-lr~i~~gg~~l~~~~~~~~~~~~~~ 335 (436)
..|+++++.+ .|++..++..+.++++|+++++|+++..|+.+......++++ ||.+++||+++++++++++++.|+.
T Consensus 238 ~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 317 (534)
T COG0318 238 LGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGP 317 (534)
T ss_pred HcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCC
Confidence 9999999997 699999999999999999999999999999998877766776 9999999999999999999999986
Q ss_pred CeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhh
Q 013780 336 ATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFT 415 (436)
Q Consensus 336 ~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~ 415 (436)
..+++ .||+||++++++.........+.+++|+|+|+++++|+|+++++++| |++|||+++||+++.| ||++|+.|
T Consensus 318 ~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~G--Y~~~pe~t 393 (534)
T COG0318 318 IAILE-GYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKG--YWNRPEAT 393 (534)
T ss_pred CceEE-eecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhh--hcCChHHH
Confidence 78999 99999999877776655201467888999999999999986776666 9999999999999999 99999999
Q ss_pred hhhccccccCCeeecCCCC
Q 013780 416 LFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 416 ~~~~~~~~~~~~~~tgD~~ 434 (436)
.+.|. .+|||+|||+|
T Consensus 394 ~~~f~---~~gW~~TGDlg 409 (534)
T COG0318 394 AEAFD---EDGWLRTGDLG 409 (534)
T ss_pred HHhhc---cCCeeeecceE
Confidence 99872 25999999997
No 4
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-58 Score=469.97 Aligned_cols=417 Identities=18% Similarity=0.269 Sum_probs=320.8
Q ss_pred CCCcceeecCCCCCcCCCCCCCchHHHHhhhcccCCCceEEEeCCCC---ccccHHHHHHHHHHHHHHHHh---cCCCCC
Q 013780 6 YGRDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSD---ESLSFSQFKSIVIKVSHSFRH---LGITKK 79 (436)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~---~gv~~g 79 (436)
..++.++|.....-..+-..-.|+.++|.+.++++|+++|+++...+ +.+||+||.+++.++|+.|.+ +|+++|
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g 119 (746)
T PTZ00342 40 ENESSVYCMKDHKKKSSLYVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEK 119 (746)
T ss_pred CCCCCceecCchhhcccccccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcC
Confidence 34455776443222222222378999999999999999999874333 689999999999999999997 499998
Q ss_pred -----------CEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----
Q 013780 80 -----------DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---- 144 (436)
Q Consensus 80 -----------d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---- 144 (436)
|+|+|+++|+++|+++.+||+++|+++||+++.++.+++.+++++++++++|++.+..+.+....
T Consensus 120 ~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~ 199 (746)
T PTZ00342 120 KYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP 199 (746)
T ss_pred ccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999999999999999877766654332
Q ss_pred -CCcEEeccCCcccc-----------------cccc-----------------------------------------ccC
Q 013780 145 -LPAVLLGSKDKVSS-----------------SGLI-----------------------------------------SRS 165 (436)
Q Consensus 145 -~~~~~~~~~~~~~~-----------------~~~~-----------------------------------------~~~ 165 (436)
.+.+++..+..... .... ...
T Consensus 200 ~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 279 (746)
T PTZ00342 200 HLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLG 279 (746)
T ss_pred CceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCC
Confidence 22333322210000 0000 000
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHH
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 245 (436)
.....|++...... .........+++++.|+|||||||.||||++||+|+.+++.............++++++.+|++
T Consensus 280 ~~~~~~~~~~~~~~--~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~ 357 (746)
T PTZ00342 280 ISIILFDDMTKNKT--TNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPIS 357 (746)
T ss_pred CEEEEHHHHHhhcc--cCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHH
Confidence 00112222222211 1122334567899999999999999999999999999887655432211122348999999999
Q ss_pred HHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhc--------cccCc------------
Q 013780 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKN--------SLVRK------------ 305 (436)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~--------~~~~~------------ 305 (436)
|++++. ..+.++..|+++++.+. ++..+++.|++++||+++++|.++..|.+. ...+.
T Consensus 358 Hi~~~~-~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 435 (746)
T PTZ00342 358 HIYERV-IAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKS 435 (746)
T ss_pred HHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999996 56778999999998865 899999999999999999999999988652 10000
Q ss_pred ----------------------cCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccC
Q 013780 306 ----------------------FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRR 363 (436)
Q Consensus 306 ----------------------~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~ 363 (436)
...++||.+++||+++++++.++|++.++ +++++ +||+||+++.++...+. +.+
T Consensus 436 ~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~-gYGlTEt~~~~~~~~~~--~~~ 511 (746)
T PTZ00342 436 NNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQ-GYGLTETTGPIFVQHAD--DNN 511 (746)
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEE-eeccCcccceeeeccCC--CCC
Confidence 01268999999999999999999999887 99999 99999998776665544 567
Q ss_pred cCcccccc-CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 364 SGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 364 ~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++++|+|+ |+++++|+|.+++...+.+..|||+++||++|.| ||++|+.|++.|. .+|||+|||+|+
T Consensus 512 ~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~G--Y~~~pe~T~~~f~---~dGW~~TGDig~ 579 (746)
T PTZ00342 512 TESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSG--YFLEKEQTKNAFT---EDGYFKTGDIVQ 579 (746)
T ss_pred cccccCcCCCcEEEEEecccccccCCCCCceEEEEecCccccc--ccCChhhhhhhcC---cCCcccCCcEEE
Confidence 89999998 9999999986555555556789999999999999 9999999999883 588999999873
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1e-57 Score=464.74 Aligned_cols=417 Identities=20% Similarity=0.276 Sum_probs=316.2
Q ss_pred CCCcceeecCCCCCcCC--CCCCCchHHHHhhhcccCCCceEEEeCC-----CC--ccccHHHHHHHHHHHHHHHHhcCC
Q 013780 6 YGRDGIYRSLRPPLVLP--SDPSFSMVHFLFRNSASYSSKLALIDAD-----SD--ESLSFSQFKSIVIKVSHSFRHLGI 76 (436)
Q Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~ti~~~l~~~~~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~gv 76 (436)
..+..+++++.....++ .....|+.++|.+.++++|+++|+.+.+ .+ .++||+||.++++++|+.|.++|+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 101 (666)
T PLN02614 22 PSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGV 101 (666)
T ss_pred CCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCC
Confidence 55566666654333332 2222599999999999999999998421 12 358999999999999999999999
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC------CCcEEe
Q 013780 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLL 150 (436)
Q Consensus 77 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~ 150 (436)
++||+|+|+++|+++|++++|||+++|+++||+++.++.+++.+++++++++++|++......+.... .+.++.
T Consensus 102 ~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~ 181 (666)
T PLN02614 102 KDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVS 181 (666)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999877655443221 122222
Q ss_pred ccCCcccccc--ccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhh
Q 013780 151 GSKDKVSSSG--LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ 228 (436)
Q Consensus 151 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~ 228 (436)
..+ ...... .......+.++++++..... .........++++++|+|||||||.||||++||+++..++.......
T Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~ 259 (666)
T PLN02614 182 FGG-VSREQKEEAETFGLVIYAWDEFLKLGEG-KQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLL 259 (666)
T ss_pred eCC-CChHHhhhhhhcCcEEEEHHHHHhhccc-CCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhc
Confidence 211 000000 00001113456666544321 11112234678999999999999999999999999998766543332
Q ss_pred h---ccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--
Q 013780 229 E---LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV-- 303 (436)
Q Consensus 229 ~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-- 303 (436)
. ..-..+|++++.+|++|.++.. ..+.++..|+++++.+ +++..+++.+++++||+++++|+++..|.+....
T Consensus 260 ~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~ 337 (666)
T PLN02614 260 KSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKL 337 (666)
T ss_pred cccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHH
Confidence 1 0112339999999999999986 4566788999998875 5899999999999999999999999887642100
Q ss_pred -------------------------------Cc-----------cCC-CcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 304 -------------------------------RK-----------FDI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 304 -------------------------------~~-----------~~l-~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
.. ..+ ++||.+++||+++++++ ++|.+.++++++++
T Consensus 338 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~ 416 (666)
T PLN02614 338 SDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQ 416 (666)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEe
Confidence 00 011 68999999999999875 56677776689999
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeC-C-CCccCCCCCceEEEEecCCcccCccccCChhhhhhh
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-D-TLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFL 418 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~-~-~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~ 418 (436)
+||+||+++.++...+.. ..+.+++|+|+|+++++|+|. + .+.++++|+.|||+|+||+++.| ||++|+.|.+.
T Consensus 417 -~YG~TE~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~G--Y~~~pe~T~~~ 492 (666)
T PLN02614 417 -GYGLTESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSG--YYKREDLTKEV 492 (666)
T ss_pred -eCchHhhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCccccc--ccCCHHHhhhh
Confidence 999999976555443331 245789999999999999983 2 34788999999999999999999 99999999998
Q ss_pred ccccccCCeeecCCCCC
Q 013780 419 WGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 419 ~~~~~~~~~~~tgD~~~ 435 (436)
| .+|||+|||+|+
T Consensus 493 f----~dGw~~TGDlg~ 505 (666)
T PLN02614 493 L----IDGWLHTGDVGE 505 (666)
T ss_pred h----ccCCcccceEEE
Confidence 8 478999999874
No 6
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.1e-57 Score=440.75 Aligned_cols=380 Identities=29% Similarity=0.358 Sum_probs=304.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
.++...+.++++.+|+..++.+...+ +.+||+|+..++.++|++|...|+.+||+|+|++.|+++|+++.+||+.+|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~ 95 (613)
T COG1022 16 HTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGA 95 (613)
T ss_pred ccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 67999999999999999999877544 8999999999999999999999997799999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccch-HHHHhhcCCC---cEEec--c---CCcccc--ccccc-cCcccchhh
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPEL-WDKVKDLNLP---AVLLG--S---KDKVSS--SGLIS-RSSKIVSFH 172 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-~~~~~~~~~~---~~~~~--~---~~~~~~--~~~~~-~~~~~~~~~ 172 (436)
+.||+.+..+.+++.++|+.++++++|++... .+.+...... ...+. . +..... ..+.. ...+...+
T Consensus 96 v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 96 VSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred eEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 99999999999999999999999999999843 3333322210 00000 0 000000 00000 00011111
Q ss_pred HHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhh-ccCCCCcEEEechhHHHHHHHH
Q 013780 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPMFHVFGLS 251 (436)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~ 251 (436)
...... .........++|+|.|+|||||||.||||++||+|+++++..+..... . .+.|++++.+|+.|++...
T Consensus 175 -~~~~~~--~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~--~~~d~~LsfLPlaHi~Er~ 249 (613)
T COG1022 175 -LIDSAG--LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPI--GPGDRVLSFLPLAHIFERA 249 (613)
T ss_pred -hhcccc--cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCC--CCCcEEEEeCcHHHHHHHH
Confidence 011111 112224567999999999999999999999999999999998877775 3 2339999999999999997
Q ss_pred HHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhc--------ccc--------------------
Q 013780 252 VILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKN--------SLV-------------------- 303 (436)
Q Consensus 252 ~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~--------~~~-------------------- 303 (436)
+.....++.|.++.... ++..++..+.+++||+++++|.+|+.+-+. ...
T Consensus 250 ~~~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~ 327 (613)
T COG1022 250 FEGGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRAL 327 (613)
T ss_pred HHHHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhh
Confidence 54566666666666554 899999999999999999999999877432 000
Q ss_pred --------------------CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccC
Q 013780 304 --------------------RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRR 363 (436)
Q Consensus 304 --------------------~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~ 363 (436)
+...-.++|++++||+++++++...++.. ++++.+ +||+||++++++..++. ..+
T Consensus 328 ~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~e-GYGlTEts~~~~v~~~~--~~~ 402 (613)
T COG1022 328 LGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILE-GYGLTETSAVVSVNPPD--RFV 402 (613)
T ss_pred cccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEE-EecccccccceEEcccc--Ccc
Confidence 00011489999999999999999999988 699999 99999999999998887 789
Q ss_pred cCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 364 SGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 364 ~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.+++|+|+|++++||+|. |||+||||+||+| ||++|+.|.++|+ .||||+|||+|+
T Consensus 403 ~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~G--Yyk~pe~Taeaf~---~DGWf~TGDlg~ 458 (613)
T COG1022 403 LGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKG--YYKNPEATAEAFT---EDGWFRTGDLGE 458 (613)
T ss_pred cCCcCCcCCCceEEEccC-----------ceEEEecchhcch--hcCChHHHhhhcc---ccCCcccCceeE
Confidence 999999999999999994 9999999999999 9999999999994 599999999974
No 7
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=6.3e-56 Score=445.87 Aligned_cols=413 Identities=36% Similarity=0.588 Sum_probs=333.5
Q ss_pred cceeecCCCCCcCCCCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcC
Q 013780 9 DGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAP 87 (436)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~ 87 (436)
+++++++.+...+|..++.++.+.+... +.+|+++|+++...+..+||+||.++++++|+.|.+ .|+++||+|+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~ 100 (560)
T PLN02574 22 TGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLP 100 (560)
T ss_pred CeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 4666666555556666667777777766 789999999987656689999999999999999998 99999999999999
Q ss_pred CCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcc
Q 013780 88 NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSK 167 (436)
Q Consensus 88 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (436)
|++++++++|||+++|+++++++|..+.+++.++++.+++++++++......+.......+.+... .. .. .....
T Consensus 101 n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~ 175 (560)
T PLN02574 101 NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPEN-YD-FD---SKRIE 175 (560)
T ss_pred CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcc-cc-cc---cCccC
Confidence 999999999999999999999999999999999999999999999987766665543332222110 00 00 01112
Q ss_pred cchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhh--c-cCCCCcEEEechhH
Q 013780 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE--L-VGELDHVVLCVLPM 244 (436)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~~p~ 244 (436)
...+.++..... .........++++++++|||||||.||+|++||+++..++..+..... . ....+++++..+|+
T Consensus 176 ~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 253 (560)
T PLN02574 176 FPKFYELIKEDF--DFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPM 253 (560)
T ss_pred cccHHHHhhcCC--cccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecch
Confidence 234555544432 222233446789999999999999999999999999887665432111 1 11123888999999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc-CccCCCcceEEEecCCCCcH
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV-RKFDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~l~~lr~i~~gg~~l~~ 323 (436)
+|.+|+...++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.... ...++++||.+++||+++++
T Consensus 254 ~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~ 333 (560)
T PLN02574 254 FHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSG 333 (560)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCH
Confidence 99999987788888999999999999999999999999999999999999999887543 34568899999999999999
Q ss_pred HHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcc
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVT 403 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~ 403 (436)
++.+++.+.++++.+++ .||+||++++.+.........+.+++|+|+++++++|+|+++++++++|+.|||+++|++++
T Consensus 334 ~~~~~~~~~~~~~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~ 412 (560)
T PLN02574 334 KFIQDFVQTLPHVDFIQ-GYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVM 412 (560)
T ss_pred HHHHHHHHHCCCCcEEe-cccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchh
Confidence 99999999997799999 99999998665433222223567899999999999999988999999999999999999999
Q ss_pred cCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 404 PGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 404 ~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.| ||++|+.+.+.| ..+|||+|||+|+
T Consensus 413 ~G--Y~~~~~~t~~~~---~~~g~~~TGDlg~ 439 (560)
T PLN02574 413 KG--YLNNPKATQSTI---DKDGWLRTGDIAY 439 (560)
T ss_pred hh--hcCChhHhhhhc---cCCCCcccceEEE
Confidence 99 999999998876 2578999999863
No 8
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.8e-56 Score=425.75 Aligned_cols=377 Identities=25% Similarity=0.355 Sum_probs=311.4
Q ss_pred CchHHH-Hhhhcc-cCCCceEEEeCCCC---ccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 013780 27 FSMVHF-LFRNSA-SYSSKLALIDADSD---ESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVI 100 (436)
Q Consensus 27 ~ti~~~-l~~~~~-~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~ 100 (436)
+|+... +.++.. ..+++.|+++..+. +.+||+||.+.+.++|+.|++ .|+ +||||+|++|+.+++++++|||+
T Consensus 8 lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ 86 (528)
T COG0365 8 LNLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATA 86 (528)
T ss_pred eechhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHH
Confidence 556444 455544 34789999877432 789999999999999999986 678 99999999999999999999999
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCc--------EEeccCCccccccccccCcccchhh
Q 013780 101 AIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPA--------VLLGSKDKVSSSGLISRSSKIVSFH 172 (436)
Q Consensus 101 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (436)
++|++.+|+.+.++++.+.+.+++++++++|+++...+..+....+. +++... .. ..|.
T Consensus 87 riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r------------~~-~~~~ 153 (528)
T COG0365 87 RIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPR------------LG-LWYD 153 (528)
T ss_pred HcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecc------------cc-ccHH
Confidence 99999999999999999999999999999999987766554433111 111111 11 5677
Q ss_pred HHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHH
Q 013780 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (436)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 252 (436)
+...... ..........+|+++++|||||||+||+|+++|+.++............ ...+|++++..++.|++|.++
T Consensus 154 ~~~~~~~--~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~-~~~~Dv~w~~ad~GW~~g~~~ 230 (528)
T COG0365 154 EAVEKAS--EKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGD-LLPGDRFWNSSDPGWIYGLWY 230 (528)
T ss_pred HHhhccC--CCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhC-CCCCCEEEeCCCchhhhCchH
Confidence 7776655 3444455889999999999999999999999999887776544332222 224499999999999999998
Q ss_pred HHHhhccCCcEEEEcC--CC-CHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHH
Q 013780 253 ILYDQLQKGNCVVSMG--KF-DIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDC 329 (436)
Q Consensus 253 ~~~~~l~~G~~v~~~~--~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~ 329 (436)
.++.+|..|+++++.+ ++ ++..+++.++++++|.++++|+.++.|.+....+..++++||.+.+.|||+++++++++
T Consensus 231 ~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~ 310 (528)
T COG0365 231 SVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWF 310 (528)
T ss_pred HHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHH
Confidence 8999999999998884 23 49999999999999999999999999999887667899999999999999999999999
Q ss_pred HhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecC--CcccCcc
Q 013780 330 QKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP--NVTPGIV 407 (436)
Q Consensus 330 ~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~--~~~~g~~ 407 (436)
.+.++ ++|.+ .||+||++++.....+ ..++++.|+|+||+++.|+|.+ |+++++|+ |+|+++.+ .++.+
T Consensus 311 ~~~~g-~~i~d-~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~-- 381 (528)
T COG0365 311 YSALG-VWILD-IYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALT-- 381 (528)
T ss_pred HHHhC-CCEec-cccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhh--
Confidence 99998 99999 9999999965555443 3455555999999999999965 99999999 99999997 88999
Q ss_pred ccCChhhhhhhccccccCCeeecCCC
Q 013780 408 YINFFVFTLFLWGCEHTDSFIRGKDQ 433 (436)
Q Consensus 408 Y~~~~~~~~~~~~~~~~~~~~~tgD~ 433 (436)
||++|+.+.+.+ -+.||.|||.
T Consensus 382 ~w~d~er~~~~y----~~~~y~tGD~ 403 (528)
T COG0365 382 YWNDPERYKEAY----FGRWYRTGDW 403 (528)
T ss_pred hhCCHHHHHHHH----hhceeecCce
Confidence 999999999877 1226666664
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.9e-56 Score=453.51 Aligned_cols=395 Identities=20% Similarity=0.259 Sum_probs=305.3
Q ss_pred CchHHHHhhhcccCCCceEEEeC-----CCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDA-----DSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
.|+.++|.+.++++|+++|+... ..+ +++||+||.++++++|+.|.++|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 68999999999999999999642 112 47999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC------CCcEEeccCCcccccc--ccccCcccchh
Q 013780 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSG--LISRSSKIVSF 171 (436)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 171 (436)
+++|+++||+++.++.+++.+++++++++++|+++...+.+.... .+.++...+ ...... .........++
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~-~~~~~~~~~~~~~~~~~~~ 201 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGD-VSSEQKEEAEELGVSCFSW 201 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECC-CChhhhhhhhcCCcEEEEH
Confidence 999999999999999999999999999999999877655443321 222332211 100000 00001123456
Q ss_pred hHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhcc---CCCCcEEEechhHHHHH
Q 013780 172 HDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV---GELDHVVLCVLPMFHVF 248 (436)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~ 248 (436)
.++..... .........++++++|+|||||||.||||++||+++..++.......... ...+|++++.+|++|.+
T Consensus 202 ~~~~~~~~--~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 279 (660)
T PLN02861 202 EEFSLMGS--LDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVY 279 (660)
T ss_pred HHHHHhCc--ccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHH
Confidence 66654432 11122334678999999999999999999999999998876554433211 12349999999999999
Q ss_pred HHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcc---------------------------
Q 013780 249 GLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNS--------------------------- 301 (436)
Q Consensus 249 g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~--------------------------- 301 (436)
++. ..+.++..|+++++.. +++..+++.|++++||+++++|+++..|.+..
T Consensus 280 ~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 357 (660)
T PLN02861 280 DQV-IETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLR 357 (660)
T ss_pred HHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 986 4556899999998874 58999999999999999999999999886410
Q ss_pred ----------ccCcc-------CC-CcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccC
Q 013780 302 ----------LVRKF-------DI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRR 363 (436)
Q Consensus 302 ----------~~~~~-------~l-~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~ 363 (436)
..... .+ .++|.+++||+++++++. +|.+.++...+++ +||+||+++.++...... ..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~-~YG~TE~~~~~~~~~~~~-~~~ 434 (660)
T PLN02861 358 KGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ-GYGLTESCGGCFTSIANV-FSM 434 (660)
T ss_pred cCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE-ecchhhhhhceeeccccc-CCC
Confidence 00000 11 579999999999999975 4666666457899 999999987655443321 335
Q ss_pred cCccccccCCcEEEEEeC-CCC-ccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 364 SGSAGTLVAGVEAQIVSV-DTL-KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 364 ~~~~G~p~~~~~v~i~d~-~~~-~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.+++|+|+|+++++|+|. ++| ..+++++.|||+++|++++.| ||++|+.|.+.| .+|||+|||+|+
T Consensus 435 ~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~G--Y~~~pe~T~~~f----~dGw~~TGDlg~ 502 (660)
T PLN02861 435 VGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSG--YHKRQDLTEEVL----IDGWFHTGDIGE 502 (660)
T ss_pred CCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCccccc--ccCCHHHHHhhh----hccCcccCceEE
Confidence 789999999999999983 344 344566789999999999999 999999999998 478999999874
No 10
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=6.4e-56 Score=424.14 Aligned_cols=400 Identities=24% Similarity=0.284 Sum_probs=326.5
Q ss_pred CCCCchHHHHhhhcccCCCceEEEeCC----CC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHH
Q 013780 24 DPSFSMVHFLFRNSASYSSKLALIDAD----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (436)
Q Consensus 24 ~~~~ti~~~l~~~~~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~l 97 (436)
.+..|+.+.|.+.+..+|+.+++-... .+ +++||.|.++++.+++..|+++|+++++.|+|+..|++||+++.+
T Consensus 72 ~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~ 151 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEM 151 (691)
T ss_pred CCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHH
Confidence 344999999999999999999996553 12 799999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEc-cchHHHHhhcC-------CCcEEeccCCccccc--cccccCcc
Q 013780 98 GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV-PELWDKVKDLN-------LPAVLLGSKDKVSSS--GLISRSSK 167 (436)
Q Consensus 98 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~ 167 (436)
||...|++.||+-...+++.+.++++.+.+.++|++ ++..+.+.+.. ++.++.... ..... ........
T Consensus 152 a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~-~~~~~~~~~~~~gv~ 230 (691)
T KOG1256|consen 152 ACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDE-PSDELKEKAENNGVE 230 (691)
T ss_pred HHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecC-CchhhhhhhhcCCeE
Confidence 999999999999999999999999999999999999 45555554422 333443322 11111 11122234
Q ss_pred cchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhcc----CCCCcEEEechh
Q 013780 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV----GELDHVVLCVLP 243 (436)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~p 243 (436)
+.+|+++.+.+......++....+++.+.|+|||||||.||||++||+|+...+.......... ...+|++++++|
T Consensus 231 v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLP 310 (691)
T KOG1256|consen 231 VYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLP 310 (691)
T ss_pred EEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCc
Confidence 8899999998864222222577899999999999999999999999999999655322222221 112399999999
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhc-----------------------
Q 013780 244 MFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKN----------------------- 300 (436)
Q Consensus 244 ~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~----------------------- 300 (436)
+.|++..++ -...+..|+++.+..+ |+..+...|++.+||.+.++|.+|.++.+.
T Consensus 311 LAHi~er~~-~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k 388 (691)
T KOG1256|consen 311 LAHIFERVV-ELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYK 388 (691)
T ss_pred HHHHHHHHH-HHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999974 4455589999999974 899999999999999999999999877442
Q ss_pred c---ccCccC-------------------CCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCC
Q 013780 301 S---LVRKFD-------------------ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPL 358 (436)
Q Consensus 301 ~---~~~~~~-------------------l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~ 358 (436)
. ...+.. -..+|.+++|++|+++++.+.++..++ ++|.+ +||+||+++.++...+.
T Consensus 389 ~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~e-GYGlTEts~g~~~~~~~ 466 (691)
T KOG1256|consen 389 LEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLE-GYGLTETSAGTTLTLPG 466 (691)
T ss_pred HHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeee-cccccccCCceEeccCC
Confidence 0 000100 148999999999999999999999997 99999 99999999666665555
Q ss_pred CCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 359 VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 359 ~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+...+++|.|+|++++|++|..+..--+.|..|||||||++++.| ||++|+.|.+.++ .+||++|||.|+
T Consensus 467 --d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~G--YyK~p~~T~e~id---eDGWLhTGDiG~ 536 (691)
T KOG1256|consen 467 --DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMG--YYKDPEKTAEAID---EDGWLHTGDIGE 536 (691)
T ss_pred --CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhcee--ccCChHHHhhhhc---ccccccccccee
Confidence 448999999999999999998776666777789999999999999 9999999999984 899999999985
No 11
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=9.4e-56 Score=451.37 Aligned_cols=395 Identities=21% Similarity=0.255 Sum_probs=312.8
Q ss_pred CchHHHHhhhcccCCCceEEEe---CCC--C--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALID---ADS--D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~---~~~--~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
.|+.++|.+.++++|+++|+.. .+. + ..+||+||.++++++|+.|.++|+++||+|+|+++|+++|+++++||
T Consensus 44 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 123 (651)
T PLN02736 44 GTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHAC 123 (651)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 7899999999999999999943 211 1 46999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCcccccc-ccccCcccchhhH
Q 013780 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSG-LISRSSKIVSFHD 173 (436)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 173 (436)
+++|++++|+++.++.+++.+++++++++++|++.+..+.+.... .+.+++..+....... ..........+++
T Consensus 124 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (651)
T PLN02736 124 SAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSK 203 (651)
T ss_pred HHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHH
Confidence 999999999999999999999999999999999987766554321 1222222110000000 0001112456666
Q ss_pred HhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH
Q 013780 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (436)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 253 (436)
+.+.... .........++++++|+|||||||.||||++||+++..++........+. ++|++++.+|++|.+++. .
T Consensus 204 ~~~~~~~-~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~--~~d~~l~~lPl~h~~~~~-~ 279 (651)
T PLN02736 204 LLAQGRS-SPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFY--PSDVHISYLPLAHIYERV-N 279 (651)
T ss_pred HHHhccc-CCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCC--CCCEEEEeCCHHHHHHHH-H
Confidence 6654321 11122334678999999999999999999999999998877766555443 349999999999999996 6
Q ss_pred HHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc----------------------------C-
Q 013780 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV----------------------------R- 304 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----------------------------~- 304 (436)
++.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+.... .
T Consensus 280 ~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (651)
T PLN02736 280 QIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNP 358 (651)
T ss_pred HHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 7788999999988764 789999999999999999999999887653100 0
Q ss_pred c------------cCC-CcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCcccccc
Q 013780 305 K------------FDI-SSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLV 371 (436)
Q Consensus 305 ~------------~~l-~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~ 371 (436)
. ..+ ++||.+++||+++++++.+++++.++ +++++ .||+||+++.++..... ..+.+++|+|+
T Consensus 359 ~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~p~ 434 (651)
T PLN02736 359 SPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLE-GYGMTETSCVISGMDEG--DNLSGHVGSPN 434 (651)
T ss_pred CchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEE-EechHHhchheeccCCC--CCCCCccCCcc
Confidence 0 011 48999999999999999999999887 89999 99999998776655443 45778999999
Q ss_pred CCcEEEEEeCCCCcc---CCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 372 AGVEAQIVSVDTLKP---LPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 372 ~~~~v~i~d~~~~~~---~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+++++|+|.+++.. ..+++.|||+++||+++.| ||++|+.|.+.| ..+|||+|||+|+
T Consensus 435 pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~G--Y~~~~~~t~~~~---~~dgw~~TGDlg~ 496 (651)
T PLN02736 435 PACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKG--YYKDEVQTREVI---DEDGWLHTGDIGL 496 (651)
T ss_pred CceEEEEEEccccCcccCCCCCCCceEEecCCccccc--cccCHHHHHhhh---ccCCCeeccceEE
Confidence 999999999544322 2334579999999999999 999999999887 3578999999874
No 12
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.2e-54 Score=433.05 Aligned_cols=408 Identities=36% Similarity=0.583 Sum_probs=335.1
Q ss_pred CCcceeecCCCCCcCCCCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Q 013780 7 GRDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFA 86 (436)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~ 86 (436)
....++++..+....+.. +|+.+.+.++++++|+++|+++.++++.+||.||.++++++|+.|.+.|+++||+|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~ 82 (537)
T PLN02246 5 SEEFIFRSKLPDIYIPNH--LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLL 82 (537)
T ss_pred cceeEecCCCCCCCCCCC--CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 344677766555555554 899999999999999999999875568999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC--CCcEEeccCCcccccccccc
Q 013780 87 PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN--LPAVLLGSKDKVSSSGLISR 164 (436)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 164 (436)
+|+++++++++||+++|++++|++|.++.+++..+++.++++++|++....+.+.... ....++..+. .
T Consensus 83 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~---------~ 153 (537)
T PLN02246 83 PNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDD---------P 153 (537)
T ss_pred CCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCC---------C
Confidence 9999999999999999999999999999999999999999999999987766554432 1112222221 1
Q ss_pred CcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHh----hhhccCCCCcEEEe
Q 013780 165 SSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA----HQELVGELDHVVLC 240 (436)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~ 240 (436)
......+.++..... ...+.....++++++++|||||||.||+|+++|+++......... .+.+ ..++++++
T Consensus 154 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~--~~~d~~l~ 229 (537)
T PLN02246 154 PEGCLHFSELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYF--HSDDVILC 229 (537)
T ss_pred CCCceeHHHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCC--CCCcEEEE
Confidence 112233444443322 222233456789999999999999999999999999877554322 1222 23399999
Q ss_pred chhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCC
Q 013780 241 VLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP 320 (436)
Q Consensus 241 ~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~ 320 (436)
.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.+++||++
T Consensus 230 ~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~ 309 (537)
T PLN02246 230 VLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAP 309 (537)
T ss_pred eechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCc
Confidence 99999999987678889999999999999999999999999999999999999999988776666678899999999999
Q ss_pred CcHHHHHHHHhhCCCCeeeeccccccccCCcccccCC---CCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEE
Q 013780 321 LGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENP---LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWV 397 (436)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~---~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v 397 (436)
+++++.+.+++.+++..+++ .||+||++.+++.... .....+++++|+|+++++++|+|++++++++.|+.|||++
T Consensus 310 l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 388 (537)
T PLN02246 310 LGKELEDAFRAKLPNAVLGQ-GYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICI 388 (537)
T ss_pred CCHHHHHHHHHHcCCCeEec-cccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEE
Confidence 99999999999998788999 9999999876543211 1113456789999999999999987899999999999999
Q ss_pred ecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 398 RGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 398 ~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+|+.++.| |+++|+.+.+.+ ..++||+|||+|+
T Consensus 389 ~g~~~~~G--Y~~~~~~~~~~~---~~~~~~~TGD~~~ 421 (537)
T PLN02246 389 RGPQIMKG--YLNDPEATANTI---DKDGWLHTGDIGY 421 (537)
T ss_pred ECCchhcc--ccCCchhhhhcc---cCCCCeeecceEE
Confidence 99999999 999999988766 3578999999764
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.3e-55 Score=436.47 Aligned_cols=387 Identities=21% Similarity=0.255 Sum_probs=312.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.+.++++|++.++.+.. ...+||+||.++++++|+.|.+ .+||+|+|+++|++++++++|||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v~ 94 (539)
T PRK06334 19 KTVLESFLKLCSEMTTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKIP 94 (539)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCee
Confidence 679999999999999999998763 3689999999999999999987 389999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-----CcEEeccCCccccccccccCcccchhhHHhhhc---
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS--- 178 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 178 (436)
+|+++.++.+++.++++.++++++++++.....+..... ...++..+.. . ....+.+.....
T Consensus 95 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~-~~~~~~~~~~~~~~~ 164 (539)
T PRK06334 95 VMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEV---------R-KELSFWEKCRIGIYM 164 (539)
T ss_pred EecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehh---------h-hhccHHHhhhhhhhh
Confidence 999999999999999999999999999877665543321 1111111100 0 000011110000
Q ss_pred -CCC----CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH
Q 013780 179 -GSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (436)
Q Consensus 179 -~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 253 (436)
... .........++++++|+|||||||.||+|++||+++..+........... .+|++++.+|++|.+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~g~~~~ 242 (539)
T PRK06334 165 SIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPK--EDDVMMSFLPPFHAYGFNSC 242 (539)
T ss_pred cCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCC--CCceEEEecchHhhhhhHHH
Confidence 000 00112345678999999999999999999999999988766554444332 33999999999999999767
Q ss_pred HHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhh
Q 013780 254 LYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKN 332 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~ 332 (436)
++.++..|+++++.. ++++..+++.|+++++|++.++|+++..|++........+++||.+++||+++++++.+++++.
T Consensus 243 ~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~ 322 (539)
T PRK06334 243 TLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKT 322 (539)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHH
Confidence 889999999998874 5799999999999999999999999999988766556678999999999999999999999999
Q ss_pred CCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCCh
Q 013780 333 IPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFF 412 (436)
Q Consensus 333 ~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~ 412 (436)
++++.+++ .||+||++++++...... .....++|+|+++++++|+|++++.++++|+.|||+++|++++.| ||++|
T Consensus 323 ~~~~~i~~-~YG~TE~~~~~~~~~~~~-~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~G--Y~~~~ 398 (539)
T PRK06334 323 FPHIQLRQ-GYGTTECSPVITINTVNS-PKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSG--YLGED 398 (539)
T ss_pred CCCCeEEe-cccccccCceEEeccCCC-CCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCccccc--ccCCc
Confidence 97799999 999999987666543332 344678999999999999997789999999999999999999999 99999
Q ss_pred hhhhhhccccccCCeeecCCCCC
Q 013780 413 VFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 413 ~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.+... ..+.++||+|||+|+
T Consensus 399 ~~~~~~--~~~~~~w~~TGD~g~ 419 (539)
T PRK06334 399 FGQGFV--ELGGETWYVTGDLGY 419 (539)
T ss_pred ccccce--eeCCceeEECCCEEE
Confidence 865422 223467999999864
No 14
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=9.9e-56 Score=429.49 Aligned_cols=381 Identities=35% Similarity=0.519 Sum_probs=303.8
Q ss_pred HhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC
Q 013780 33 LFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 33 l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 112 (436)
|.++++++|+++|+++ +.++.+||+||+++++++|..|+++|+++|++|+|+++|+++++++++||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 448999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEE----ccchHHHHhhcC----CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCC
Q 013780 113 YTVSELSKQVKDSNPKLVIT----VPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (436)
++.+++.++++.++++++|+ +......+.... ....++..+. ......+.+..... ...
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~ 146 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDR-----------DDLPKKEALKSASL--SDE 146 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESH-----------SSCTTCHHHHHHHH--CHC
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhcccccccccccccc-----------cccccccccccccc--ccc
Confidence 99999999999999999997 222222222221 1222222110 00011111111110 000
Q ss_pred CCCC-CCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 185 PDVS-VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 185 ~~~~-~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
.... ..++++++++|||||||.||+|.++|+++++.+..+. .......+ |++++.+|++|.+|++..++.++..|++
T Consensus 147 ~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~-~~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 224 (417)
T PF00501_consen 147 PQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA-LPEYFGLG-DRILSFLPLSHIFGLISALLAALFSGAT 224 (417)
T ss_dssp SHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH-HHHTTTTT-TEEEESS-TTSHHHHHHHHHHHHHCTSE
T ss_pred cccCCCCccceeEeeccccccccccccccccccccccccccc-cccccccC-ceEEeecccccccccccccccccccccc
Confidence 0000 0568999999999999999999999999999977754 11111111 5999999999999997799999999999
Q ss_pred EEEcCCCC---HHHHHHHHHHhcceEEEecHHHHHHHHhccccC----ccCCCcceEEEecCCCCcHHHHHHHHhhCCCC
Q 013780 264 VVSMGKFD---IEMALRAIEKYRVTVWWVVPPIILALAKNSLVR----KFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (436)
Q Consensus 264 v~~~~~~~---~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~ 336 (436)
+++.+... +..+++.++++++|+++++|+++..|++..... ..++++||.+++||+++++++.+++++.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 304 (417)
T PF00501_consen 225 LVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNA 304 (417)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTS
T ss_pred ccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccc
Confidence 99998654 477899999999999999999999998843222 35788999999999999999999999999855
Q ss_pred eeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhh
Q 013780 337 TIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTL 416 (436)
Q Consensus 337 ~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~ 416 (436)
++++ .||+||++.+++.........+.+++|+|+|+++++|+|+++++++++|+.|||+++|+.++.| |+++|+.+.
T Consensus 305 ~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~g--y~~~~~~~~ 381 (417)
T PF00501_consen 305 PIIN-LYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSG--YYNDPELTA 381 (417)
T ss_dssp EEEE-EEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSE--ETTBHHHHH
T ss_pred ccee-cccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCcccee--eeccccccc
Confidence 9999 9999999998875532221457889999999999999998779999999999999999999999 999999999
Q ss_pred hhccccccCCeeecCCCCC
Q 013780 417 FLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 417 ~~~~~~~~~~~~~tgD~~~ 435 (436)
+.|. ++|||+|||+|+
T Consensus 382 ~~~~---~~~~~~TGD~g~ 397 (417)
T PF00501_consen 382 EAFI---DDGWYRTGDLGR 397 (417)
T ss_dssp HHEE---TTSEEEEEEEEE
T ss_pred cccc---cccceecceEEE
Confidence 9883 357999999874
No 15
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=7.4e-54 Score=429.97 Aligned_cols=411 Identities=31% Similarity=0.506 Sum_probs=332.3
Q ss_pred CCcceeecCCCCCcCCCCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Q 013780 7 GRDGIYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFA 86 (436)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~ 86 (436)
++..+++++.+....+. .+|+.+.|.+.++++|+++|+++...++.+||.||.+++.++|+.|.+.|+++||+|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~ 87 (546)
T PLN02330 10 DNEHIFRSRYPSVPVPD--KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVL 87 (546)
T ss_pred ccceeeccCCCCCCCCC--CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 44567777766644333 4899999999999999999999765568999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCc
Q 013780 87 PNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSS 166 (436)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
+|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+.......+++... ...
T Consensus 88 ~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~----------~~~ 157 (546)
T PLN02330 88 PNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEE----------KIE 157 (546)
T ss_pred CCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCC----------CCC
Confidence 9999999999999999999999999999999999999999999999998877776654443332211 111
Q ss_pred ccchhhHHhhhcCCC-CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHH
Q 013780 167 KIVSFHDLIELSGSV-TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (436)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 245 (436)
....+.+++...... .........++++++++|||||||.||+|.++|+++..+...............+..+..+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (546)
T PLN02330 158 GAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFF 237 (546)
T ss_pred CcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChH
Confidence 223455555433211 1112233457889999999999999999999999998764321111111111126889999999
Q ss_pred HHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCC--cceEEEecCCCCcH
Q 013780 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDIS--SLKLVGSGAAPLGK 323 (436)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~--~lr~i~~gg~~l~~ 323 (436)
|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......++. ++|.+++||+++++
T Consensus 238 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~ 317 (546)
T PLN02330 238 HIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAP 317 (546)
T ss_pred HHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCH
Confidence 9999887788999999999999999999999999999999999999999999886554444444 57999999999999
Q ss_pred HHHHHHHhhCCCCeeeeccccccccCCcccccC-CCC--CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecC
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETCAPISLEN-PLV--GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP 400 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~-~~~--~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~ 400 (436)
++.+++++.|+++++++ .||+||++++..... +.. ...+.+++|+|+|+++++|+|+++++++++|+.|||+++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~ 396 (546)
T PLN02330 318 ELLTAFEAKFPGVQVQE-AYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQ 396 (546)
T ss_pred HHHHHHHHHcCCCeEEe-cccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecc
Confidence 99999999997799999 999999876543321 111 12455789999999999999987899999999999999999
Q ss_pred CcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 401 NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 401 ~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.++.| |+++++.+.+.+ +.++||+|||+|+
T Consensus 397 ~~~~g--y~~~~~~~~~~~---~~~g~~~TGD~~~ 426 (546)
T PLN02330 397 CVMQG--YYNNKEETDRTI---DEDGWLHTGDIGY 426 (546)
T ss_pred hhhhh--hccCccchhhhc---cCCCceecccEEE
Confidence 99999 999999988765 3578999999864
No 16
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=3.1e-54 Score=441.33 Aligned_cols=398 Identities=22% Similarity=0.266 Sum_probs=302.9
Q ss_pred CchHHHHhhhcccCCCceEEEeC----------CCC-----------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDA----------DSD-----------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIF 85 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~ 85 (436)
.|+.++|.+.++++|+++|+.+. .++ ..+||+|+.++++++|+.|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 78999999999999999999432 012 238999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCcccccc
Q 013780 86 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSG 160 (436)
Q Consensus 86 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 160 (436)
++|+++|+++++||+++|+++||+++.++.+++.++++.++++++|++.+..+.+.... .+.++...+.......
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 99999999999999999999999999999999999999999999999987766654432 2223322221100000
Q ss_pred --ccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhh-hccCCCCcE
Q 013780 161 --LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ-ELVGELDHV 237 (436)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~ 237 (436)
.......+.+|+++...+.. .........++++++|+|||||||.||||++||+++..++....... .+ ..+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~--~~~d~ 294 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKE-NPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKL--GKNDV 294 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhcc-CCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCC--CCCCE
Confidence 00011123456666654432 11122334679999999999999999999999999998876654332 12 23399
Q ss_pred EEechhHHHHHHHHHHHHhhccCCcEEEEcCCCC--------HHHHHHHHHHhcceEEEecHHHHHHHHhccccC-----
Q 013780 238 VLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD--------IEMALRAIEKYRVTVWWVVPPIILALAKNSLVR----- 304 (436)
Q Consensus 238 ~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~--------~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----- 304 (436)
+++.+|++|.+++. ..+.++..|+++.+..+.. +..++..+++++||++.++|.++..+.+.....
T Consensus 295 ~l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~ 373 (696)
T PLN02387 295 YLAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKG 373 (696)
T ss_pred EEEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhccc
Confidence 99999999999986 4444566777776543321 234567899999999999999999886531100
Q ss_pred ------------------------------------------ccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 305 ------------------------------------------KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 305 ------------------------------------------~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
....+++|.+++||+++++++.+.++..++ +++++ +
T Consensus 374 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g-~~v~~-~ 451 (696)
T PLN02387 374 GLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG-APIGQ-G 451 (696)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-CCeeE-e
Confidence 000158999999999999999988888886 99999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCC-ccC--CCCCceEEEEecCCcccCccccCChhhhhhhc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTL-KPL--PPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW 419 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~-~~~--~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~ 419 (436)
||+||+++.++..... +...+++|+|+|+++++|+|.+++ ..+ .++..|||+++|++++.| ||++|+.|.+.|
T Consensus 452 YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~G--Y~~~pe~T~~~f 527 (696)
T PLN02387 452 YGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLG--YFKNQEKTDEVY 527 (696)
T ss_pred echhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccch--hcCCHHHHhhhh
Confidence 9999998776655443 456789999999999999995343 322 244579999999999999 999999999987
Q ss_pred cccccC--CeeecCCCCC
Q 013780 420 GCEHTD--SFIRGKDQQT 435 (436)
Q Consensus 420 ~~~~~~--~~~~tgD~~~ 435 (436)
.. +.+ +||+|||+|+
T Consensus 528 ~~-d~~G~~W~~TGDig~ 544 (696)
T PLN02387 528 KV-DERGMRWFYTGDIGQ 544 (696)
T ss_pred cc-ccCCCceeecCceEE
Confidence 21 123 4999999874
No 17
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.6e-54 Score=435.16 Aligned_cols=398 Identities=22% Similarity=0.297 Sum_probs=309.6
Q ss_pred eeecCCCCCcCCCCCCCchHHHHhhhcccCCCceEEEeCC-C--CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q 013780 11 IYRSLRPPLVLPSDPSFSMVHFLFRNSASYSSKLALIDAD-S--DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP 87 (436)
Q Consensus 11 ~~~~~~~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~-~--~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~ 87 (436)
.+++.++....+ .|+.+.|.++++++|+++|+++.+ . .+.+||+||.++++++|+.|.+.|+++||+|+++++
T Consensus 27 ~~~~~~~~~~~~----~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~ 102 (614)
T PRK08180 27 YLRSAEPLGDYP----RRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSG 102 (614)
T ss_pred EEecCCCCCCcC----ccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecC
Confidence 344454444443 679999999999999999998752 1 268999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHhCCeEeecCCCCC-----HHHHHHHHHhcCCcEEEEccc--hHHHHhhcCC-CcEEeccCCccccc
Q 013780 88 NSIHFPICFLGVIAIGAIASTANPVYT-----VSELSKQVKDSNPKLVITVPE--LWDKVKDLNL-PAVLLGSKDKVSSS 159 (436)
Q Consensus 88 n~~~~~~~~lA~~~~G~~~v~l~~~~~-----~~~~~~~l~~~~~~~vi~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (436)
|++++++++|||+++|++++|++|.++ .+++.++++.++++++|+++. ....+..... ...++..+..
T Consensus 103 n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~---- 178 (614)
T PRK08180 103 NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGA---- 178 (614)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCC----
Confidence 999999999999999999999999988 799999999999999999864 2222222111 1111111100
Q ss_pred cccccCcccchhhHHhhhcCCCC-CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEE
Q 013780 160 GLISRSSKIVSFHDLIELSGSVT-DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVV 238 (436)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~ 238 (436)
........+.++........ ........++++++|+|||||||.||+|++||+++..++......+.......+++
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 255 (614)
T PRK08180 179 ---VPGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVL 255 (614)
T ss_pred ---CCCcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEE
Confidence 00111234555544321100 11112345789999999999999999999999999988776555544432234899
Q ss_pred EechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCH---HHHHHHHHHhcceEEEecHHHHHHHHhcccc----CccCCCc
Q 013780 239 LCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDI---EMALRAIEKYRVTVWWVVPPIILALAKNSLV----RKFDISS 310 (436)
Q Consensus 239 ~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~---~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~~~l~~ 310 (436)
++.+|++|.+++...++.++..|+++++.+ .+++ ..+++.++++++|+++++|+++..|.+.... ....+++
T Consensus 256 l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~ 335 (614)
T PRK08180 256 VDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSR 335 (614)
T ss_pred EEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccc
Confidence 999999999998777889999999999875 3443 5678899999999999999999988764322 2345789
Q ss_pred ceEEEecCCCCcHHHHHHHHhh----CC-CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCc
Q 013780 311 LKLVGSGAAPLGKELMEDCQKN----IP-GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLK 385 (436)
Q Consensus 311 lr~i~~gg~~l~~~~~~~~~~~----~~-~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~ 385 (436)
||.+++||+++++++.+++++. ++ ++++++ .||+||++++++..... ..+++++|+|+|+++++|+|+
T Consensus 336 lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~---- 408 (614)
T PRK08180 336 LKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMT-GLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPV---- 408 (614)
T ss_pred eeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeee-eecccccCCceEecccc--cCCCCcccCccCCcEEEEecC----
Confidence 9999999999999999999875 33 367899 99999998766654433 456789999999999999984
Q ss_pred cCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 386 PLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 386 ~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|..|||+++|++++.| ||++|+.+.+.| +.+|||+|||+|+
T Consensus 409 ----~~~GEi~vrg~~v~~G--Y~~~p~~t~~~~---~~dgw~~TGDlg~ 449 (614)
T PRK08180 409 ----GGKLEVRVKGPNVTPG--YWRAPELTAEAF---DEEGYYRSGDAVR 449 (614)
T ss_pred ----CCCcEEEEecCccchh--hcCChhHhHhhc---ccCCceeccceEE
Confidence 3459999999999999 999999999877 3578999999875
No 18
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-54 Score=431.28 Aligned_cols=381 Identities=21% Similarity=0.253 Sum_probs=315.6
Q ss_pred chHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
++.++|.+.++++|+++|+++. +..+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v 127 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARII 127 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEE
Confidence 7999999999999999999987 68999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC---CcEEeccCCccccccccccCcccchhhHHhhhcCCCCCC
Q 013780 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (436)
Q Consensus 108 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (436)
|+++.++.+++.++++.++++++|+++.....+..... ....+....... .....++..++++..... .
T Consensus 128 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~-- 199 (549)
T PRK07788 128 LLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDD----EPSGSTDETLDDLIAGSS--T-- 199 (549)
T ss_pred EeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCcc----ccCCcCcccHHHHhcCCC--C--
Confidence 99999999999999999999999999877666544321 111111100000 011134556777665432 1
Q ss_pred CCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEE
Q 013780 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (436)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v 264 (436)
.......++.++++|||||||.||+|+++|.++............+.. .+++++..|++|.+|+. .++.++..|+++
T Consensus 200 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~-~~~~~l~~G~~~ 276 (549)
T PRK07788 200 APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRA--GETTLLPAPMFHATGWA-HLTLAMALGSTV 276 (549)
T ss_pred CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCc--CCeEEEccchHHHHHHH-HHHHHHHhCCEE
Confidence 111234567899999999999999999999999887666555444433 38999999999999996 567789999999
Q ss_pred EEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 265 VSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
++...+++..+++.++++++|++.++|+++..|.+.... ...++++||.+++||+++++++.+++++.++ ..+++ .
T Consensus 277 v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~-~ 354 (549)
T PRK07788 277 VLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFG-PVLYN-L 354 (549)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhC-cccee-c
Confidence 999889999999999999999999999999999887654 4556889999999999999999999999997 88999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcccc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 422 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~ 422 (436)
||+||++..+.... ......++++|+|+++++++|+|+ ++++++.|+.|||+++|+.++.| |+++++. ..
T Consensus 355 YG~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~g~~~~~g--Y~~~~~~--~~---- 424 (549)
T PRK07788 355 YGSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILDE-NGNEVPRGVVGRIFVGNGFPFEG--YTDGRDK--QI---- 424 (549)
T ss_pred cCcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEECC-CcCCCCCCCeEEEEEeCCCcccc--ccCCCcc--cc----
Confidence 99999876554332 211346789999999999999995 89999999999999999999999 9998875 22
Q ss_pred ccCCeeecCCCC
Q 013780 423 HTDSFIRGKDQQ 434 (436)
Q Consensus 423 ~~~~~~~tgD~~ 434 (436)
.+|||+|||+|
T Consensus 425 -~~g~~~TGDl~ 435 (549)
T PRK07788 425 -IDGLLSSGDVG 435 (549)
T ss_pred -cCCceecCceE
Confidence 36799999976
No 19
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-53 Score=425.75 Aligned_cols=398 Identities=29% Similarity=0.436 Sum_probs=329.1
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
++.|+.+.|.+.++++|+++|+++. ++.+||+||.+++.++|+.|.+. |+++|++|+++++|+++++++++||+++|
T Consensus 8 ~~~tl~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 85 (546)
T PRK08314 8 PETSLFHNLEVSARRYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRAN 85 (546)
T ss_pred CCCCHHHHHHHHHHHcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 3478999999999999999999987 68999999999999999999998 99999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEecc-CCccccc-cc-------------ccc
Q 013780 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGS-KDKVSSS-GL-------------ISR 164 (436)
Q Consensus 104 ~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~-~~-------------~~~ 164 (436)
++++|++|..+.+++.++++.+++++++++......+.... .+.+++.. ....... .. .-.
T Consensus 86 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 86 AVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred cEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 99999999999999999999999999999987766554431 12222211 0000000 00 000
Q ss_pred CcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhH
Q 013780 165 SSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPM 244 (436)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ 244 (436)
..++..+++...... ........++++++|+|||||||.||+|.++|++++.++........+. ..|++++.+|+
T Consensus 166 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~p~ 240 (546)
T PRK08314 166 PGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNST--PESVVLAVLPL 240 (546)
T ss_pred ccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCC--CCceEEEEcCc
Confidence 112334444443221 1123345678999999999999999999999999998877655554443 33999999999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHH
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKE 324 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~ 324 (436)
+|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||++++++
T Consensus 241 ~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~ 320 (546)
T PRK08314 241 FHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMPEA 320 (546)
T ss_pred hHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCCHH
Confidence 99999987889999999999999999999999999999999999999999999887665666788999999999999999
Q ss_pred HHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCccc
Q 013780 325 LMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP 404 (436)
Q Consensus 325 ~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 404 (436)
+.+++.+.++ .++++ .||+||++......... ..+..++|.|+++++++|+|+++++.++.|+.|||+++|++++.
T Consensus 321 ~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 396 (546)
T PRK08314 321 VAERLKELTG-LDYVE-GYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFK 396 (546)
T ss_pred HHHHHHHHcC-CcEEe-cccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhc
Confidence 9999999997 89999 99999998776655443 34568999999999999999888999999999999999999999
Q ss_pred CccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 405 GIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 405 g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
| |+++++.+.+.|-.+...+||+|||+|+
T Consensus 397 g--Y~~~~~~t~~~f~~~~~~~~~~TGDl~~ 425 (546)
T PRK08314 397 G--YWNRPEATAEAFIEIDGKRFFRTGDLGR 425 (546)
T ss_pred c--ccCChhHhhhhhhhcCCCceEecCCEEE
Confidence 9 9999999988774333446999999863
No 20
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.6e-53 Score=434.72 Aligned_cols=408 Identities=21% Similarity=0.265 Sum_probs=312.4
Q ss_pred CCcCCCCCCCchHHHH-hhhcc-cCCCceEEEeCC----CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc
Q 013780 18 PLVLPSDPSFSMVHFL-FRNSA-SYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH 91 (436)
Q Consensus 18 ~~~~~~~~~~ti~~~l-~~~~~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~ 91 (436)
..|+++. ..|+...+ .++++ .+|+++|+++.. ..+.+||+||.+++.++|+.|++.|+++||+|+|+++|+++
T Consensus 79 ~~wf~g~-~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e 157 (666)
T PLN02654 79 IEWFKGG-KTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME 157 (666)
T ss_pred ccccCCC-EeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH
Confidence 4566653 47775544 45554 589999998742 13689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHh-------------hcC---CC-cEEeccCC
Q 013780 92 FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK-------------DLN---LP-AVLLGSKD 154 (436)
Q Consensus 92 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~-------------~~~---~~-~~~~~~~~ 154 (436)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++......+ ... .. ..++....
T Consensus 158 ~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
T PLN02654 158 LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYEN 237 (666)
T ss_pred HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecc
Confidence 99999999999999999999999999999999999999999876432111 000 00 01111010
Q ss_pred cccc--ccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhh-hhhHHhhhhcc
Q 013780 155 KVSS--SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAA-SLMISAHQELV 231 (436)
Q Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~ 231 (436)
.... ............++++....+ .........++++++|+|||||||.||||+++|++++.. .........+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~- 314 (666)
T PLN02654 238 QLAMKREDTKWQEGRDVWWQDVVPNYP--TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDY- 314 (666)
T ss_pred cccccccccccccCCcccHHHHhhcCC--CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCC-
Confidence 0000 000000001122444432221 111223356799999999999999999999999998643 2333333333
Q ss_pred CCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhccc--cCc
Q 013780 232 GELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRK 305 (436)
Q Consensus 232 ~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~--~~~ 305 (436)
..+|++++..|++|++|....++.+|..|+++++.++ +++..+++.|+++++|+++++|+++..|.+... ...
T Consensus 315 -~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 393 (666)
T PLN02654 315 -KPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTR 393 (666)
T ss_pred -CCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcccccc
Confidence 2339999999999999988778999999999999853 479999999999999999999999999988653 234
Q ss_pred cCCCcceEEEecCCCCcHHHHHHHHhhCCC--CeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCC
Q 013780 306 FDISSLKLVGSGAAPLGKELMEDCQKNIPG--ATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT 383 (436)
Q Consensus 306 ~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~--~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~ 383 (436)
.++++||.++++|+++++++.+++.+.++. +++.+ .||+||+++......+.....+++++|+|++|++++|+| ++
T Consensus 394 ~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~-~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~ 471 (666)
T PLN02654 394 HSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD-TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EK 471 (666)
T ss_pred CChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceec-cccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CC
Confidence 578899999999999999999999999974 67889 999999987666544432245788999999999999999 48
Q ss_pred CccCCCCCceEEEEec--CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 384 LKPLPPNQLGEIWVRG--PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 384 ~~~~~~g~~Gel~v~g--~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|++++.++.|||++++ |+++.| ||++++.+...+- -.-+|||+|||+|+
T Consensus 472 g~~~~~~~~Gel~v~~~~p~~~~g--y~~~~~~~~~~~~-~~~~g~~~TGD~~~ 522 (666)
T PLN02654 472 GKEIEGECSGYLCVKKSWPGAFRT--LYGDHERYETTYF-KPFAGYYFSGDGCS 522 (666)
T ss_pred CCCCCCCCceEEEEcCCCchhhhh--hcCChHHHHHhhh-hcCCCEEEeCceEE
Confidence 8999988999999999 789999 9999998877541 11267999999873
No 21
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.3e-53 Score=431.99 Aligned_cols=396 Identities=27% Similarity=0.362 Sum_probs=311.6
Q ss_pred CchHHHHhhhcccCCCceEEEeCC------CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVI 100 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~------~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~ 100 (436)
.|+.++|.+.++++|+++|+++.. ..+++||+||.+++.++|+.|+++|+++||+|+++++|++++++++|||+
T Consensus 25 ~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 25 ASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 679999999999999999998631 24799999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch-----HHHHhh----cC-CCcEEeccCCcccccc--c------c
Q 013780 101 AIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL-----WDKVKD----LN-LPAVLLGSKDKVSSSG--L------I 162 (436)
Q Consensus 101 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~----~~-~~~~~~~~~~~~~~~~--~------~ 162 (436)
++| +++|+++.++.+++.++++.++++++|++... .+.+.. .. .+.++........... . .
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 183 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRR 183 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccccccc
Confidence 999 56999999999999999999999999997543 222211 11 1222221111000000 0 0
Q ss_pred ccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEech
Q 013780 163 SRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVL 242 (436)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (436)
....++..+.+.+...............++++++++|||||||.||+|.+||+++..++........+. .++++++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~ 261 (632)
T PRK07529 184 KAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLG--PGDTVFCGL 261 (632)
T ss_pred ccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCC--CCCEEEEec
Confidence 012234456665554432112222334678999999999999999999999999998876655544442 339999999
Q ss_pred hHHHHHHHHHHHHhhccCCcEEEEcCCC---C---HHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEe
Q 013780 243 PMFHVFGLSVILYDQLQKGNCVVSMGKF---D---IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGS 316 (436)
Q Consensus 243 p~~~~~g~~~~~~~~l~~G~~v~~~~~~---~---~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~ 316 (436)
|++|.+++...++.++..|+++++.++. + ...+++.++++++|++.++|+++..|.+.... ..++++||.+++
T Consensus 262 pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~v~~ 340 (632)
T PRK07529 262 PLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRYALC 340 (632)
T ss_pred CchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEEEEE
Confidence 9999999987899999999999998532 1 36788999999999999999999999887543 346889999999
Q ss_pred cCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeC-CCC---ccCCCCCc
Q 013780 317 GAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSV-DTL---KPLPPNQL 392 (436)
Q Consensus 317 gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~-~~~---~~~~~g~~ 392 (436)
||+++++++.+++++.++ +++++ .||+||+++++...... ...+.+++|+|+|+++++|+.. +++ +++++|+.
T Consensus 341 gg~~l~~~l~~~~~~~~g-~~l~~-~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~ 417 (632)
T PRK07529 341 GAAPLPVEVFRRFEAATG-VRIVE-GYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEV 417 (632)
T ss_pred cCCCCCHHHHHHHHHHhC-CcEee-eecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcCCCCcccccCCCCCc
Confidence 999999999999999996 99999 99999998776655433 2447889999999999999632 356 78999999
Q ss_pred eEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 393 GEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 393 Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|||+++|++++.| |+++++. ...| ..++||+|||+|+
T Consensus 418 Gel~v~gp~v~~G--Y~~~~~~-~~~~---~~~gw~~TGDlg~ 454 (632)
T PRK07529 418 GVLCIAGPNVFSG--YLEAAHN-KGLW---LEDGWLNTGDLGR 454 (632)
T ss_pred eEEEEECCCcccc--ccCCccc-cccc---cCCCceEcCcEEE
Confidence 9999999999999 9986643 3333 2578999999874
No 22
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.5e-53 Score=428.94 Aligned_cols=392 Identities=25% Similarity=0.294 Sum_probs=307.4
Q ss_pred CCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 013780 23 SDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (436)
Q Consensus 23 ~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~ 102 (436)
+.-+.|+.++|.+.++++|+++|+++. ++.+||+||.++++++|+.|.++|+++||+|+|+++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 3 NHSQAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred chhhhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 344588999999999999999999876 689999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhc-----C-CCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL-----N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 103 G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
|++++|+++.++.+++.+++++++++++++++......... . .+..+...+ .... . ......+...+++..
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~-~-~~~~~~~~~~~~~~~ 157 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLES-PSSS-V-FIFLNSFLTTEMLKQ 157 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecC-cccc-c-ccchhhccccchhcc
Confidence 99999999999999999999999999999987542222111 1 111121111 0000 0 000001111111111
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHh
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 256 (436)
.... .........++++++++|||||||.||+|+++|+++..+.........+.. .|+++..+|++|.+++. .++.
T Consensus 158 ~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~g~~-~~~~ 233 (563)
T PLN02860 158 RALG-TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGE--DDVYLHTAPLCHIGGLS-SALA 233 (563)
T ss_pred Cccc-cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCC--CCEEEEecCchhhccHH-HHHH
Confidence 1000 011112335789999999999999999999999999877665444444433 39999999999999986 6889
Q ss_pred hccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCC
Q 013780 257 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIP 334 (436)
Q Consensus 257 ~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~ 334 (436)
++..|+++++.+++++..+++.++++++|++.++|+++..|.+.... ....+++||.+++||+++++++.++|++.|+
T Consensus 234 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~ 313 (563)
T PLN02860 234 MLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFP 313 (563)
T ss_pred HHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999876432 2346789999999999999999999999997
Q ss_pred CCeeeeccccccccCCcccccCCCCC---------------------ccCcCccccccCCcEEEEEeCCCCccCCCCCce
Q 013780 335 GATIFQVGYGMTETCAPISLENPLVG---------------------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 393 (436)
Q Consensus 335 ~~~i~~~~YG~tE~~~~~~~~~~~~~---------------------~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~G 393 (436)
+.++++ .||+||+++.++....... .....++|+|+|+++++|++++ +|+.|
T Consensus 314 ~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~G 386 (563)
T PLN02860 314 NAKLFS-AYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVG 386 (563)
T ss_pred CCceec-CCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCcee
Confidence 799999 9999999765543221100 1112378999999999999853 68899
Q ss_pred EEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 394 EIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 394 el~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
||+++|+.++.| ||++|+.+.+.+ ..+|||+|||+|+
T Consensus 387 el~v~g~~~~~G--Y~~~~~~t~~~~---~~~g~~~TGDl~~ 423 (563)
T PLN02860 387 RILTRGPHVMLG--YWGQNSETASVL---SNDGWLDTGDIGW 423 (563)
T ss_pred EEEEecCccccc--ccCCccccchhc---cCCCeEEccceEE
Confidence 999999999999 999999988766 3578999999864
No 23
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=9.2e-53 Score=428.04 Aligned_cols=416 Identities=20% Similarity=0.218 Sum_probs=311.2
Q ss_pred CcceeecCCCCCcCCC--CCCCchHHHHhhhcccCCCceEEEeCC---C--C--ccccHHHHHHHHHHHHHHHHhcCCCC
Q 013780 8 RDGIYRSLRPPLVLPS--DPSFSMVHFLFRNSASYSSKLALIDAD---S--D--ESLSFSQFKSIVIKVSHSFRHLGITK 78 (436)
Q Consensus 8 ~~~~~~~~~~~~~~~~--~~~~ti~~~l~~~~~~~p~~~a~~~~~---~--~--~~~Ty~el~~~~~~la~~L~~~gv~~ 78 (436)
+..++|........+. ....|+.++|.+.++++|+++|+.... . + .++||+|+.++++++|+.|.+.|+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~ 100 (660)
T PLN02430 21 VGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEP 100 (660)
T ss_pred CCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCC
Confidence 5666776433222211 123789999999999999999996431 1 1 35799999999999999999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH-HHHhhc-----CCCcEEecc
Q 013780 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW-DKVKDL-----NLPAVLLGS 152 (436)
Q Consensus 79 gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~-~~~~~~-----~~~~~~~~~ 152 (436)
||+|+|+++|+++|+++++||+++|+++||+++.++.+++.++++.++++++|+++... +.+... ..+.++...
T Consensus 101 gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~ 180 (660)
T PLN02430 101 GSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFT 180 (660)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999987543 222221 122222221
Q ss_pred CCcccc-ccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc-
Q 013780 153 KDKVSS-SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL- 230 (436)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~- 230 (436)
+..... ...........++++++..+.... .......++++++|+|||||||.||||++||+++..++.........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~ 259 (660)
T PLN02430 181 SVTEEESDKASQIGVKTYSWIDFLHMGKENP-SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQF 259 (660)
T ss_pred CCChHHhhhhhcCCcEEEEHHHHHHhhccCC-CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhcccc
Confidence 100000 000000112345666665443211 11223457899999999999999999999999998876654332211
Q ss_pred --cCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc-----
Q 013780 231 --VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV----- 303 (436)
Q Consensus 231 --~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----- 303 (436)
....+|++++.+|++|.++... .+.++..|+++.+... ++..+++.|++++||++.++|.+++.+.+....
T Consensus 260 ~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~ 337 (660)
T PLN02430 260 EDKMTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQEL 337 (660)
T ss_pred ccCCCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhcc
Confidence 1123399999999999999874 4567889999987753 788999999999999999999999887642100
Q ss_pred --------------------------Ccc--------------CCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 304 --------------------------RKF--------------DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 304 --------------------------~~~--------------~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
... ..++||.+++||+++++++.+.++ .+++..+++ +|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~-~Y 415 (660)
T PLN02430 338 NPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQ-GY 415 (660)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeee-ec
Confidence 000 015899999999999999876655 444478999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEe-CCCC-ccCCCCCceEEEEecCCcccCccccCChhhhhhhccc
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVS-VDTL-KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 421 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d-~~~~-~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~ 421 (436)
|+||+++.++...+.. ...++++|+|.++++++++| ++.+ .+++.+..|||+|+|++++.| ||++|+.|.+.|
T Consensus 416 G~TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~G--Y~~~~e~t~~~~-- 490 (660)
T PLN02430 416 GLTETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSG--YYKNPELTEEVM-- 490 (660)
T ss_pred chhhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCcccc--ccCChHHhhhhh--
Confidence 9999987766554432 34578999999999999987 3333 455666789999999999999 999999999988
Q ss_pred cccCCeeecCCCCC
Q 013780 422 EHTDSFIRGKDQQT 435 (436)
Q Consensus 422 ~~~~~~~~tgD~~~ 435 (436)
.+|||+|||+|+
T Consensus 491 --~dGw~~TGDig~ 502 (660)
T PLN02430 491 --KDGWFHTGDIGE 502 (660)
T ss_pred --hccceeccceEE
Confidence 588999999874
No 24
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-53 Score=434.27 Aligned_cols=393 Identities=19% Similarity=0.256 Sum_probs=303.9
Q ss_pred CchHHHHhhhcccCCCceEEEeCC-------------------------CCccccHHHHHHHHHHHHHHHHhcCCCCCCE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD-------------------------SDESLSFSQFKSIVIKVSHSFRHLGITKKDV 81 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~ 81 (436)
.|+.++|.++++++|+++|+.+.. ..+++||+||.++++++|+.|.++|+++||+
T Consensus 69 ~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~ 148 (700)
T PTZ00216 69 PNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSN 148 (700)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 689999999999999999998741 2478999999999999999999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCcc
Q 013780 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKV 156 (436)
Q Consensus 82 V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~ 156 (436)
|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++......+.... ....++..+...
T Consensus 149 V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~ 228 (700)
T PTZ00216 149 VAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLP 228 (700)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCc
Confidence 999999999999999999999999999999999999999999999999999876654442211 111222222110
Q ss_pred ccccccccCcccchhhHHhhhcCC--CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc--cC
Q 013780 157 SSSGLISRSSKIVSFHDLIELSGS--VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--VG 232 (436)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--~~ 232 (436)
. ..........++++++..+.. ..........++++++|+|||||||.||||++||+|+.+++......... ..
T Consensus 229 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~ 306 (700)
T PTZ00216 229 A--SVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGP 306 (700)
T ss_pred c--ccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCC
Confidence 0 000112234567777655421 01112234468899999999999999999999999999887665433211 11
Q ss_pred -CCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHH-------HHHHhcceEEEecHHHHHHHHhcccc-
Q 013780 233 -ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALR-------AIEKYRVTVWWVVPPIILALAKNSLV- 303 (436)
Q Consensus 233 -~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~-------~l~~~~~t~l~~~p~~~~~l~~~~~~- 303 (436)
..++++++.+|++|.+++. .....+..|+++.+. ++..+.+ .++++++|++.++|.+++.+.+....
T Consensus 307 ~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~ 382 (700)
T PTZ00216 307 PEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAK 382 (700)
T ss_pred CCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHH
Confidence 2348999999999999986 455567888888774 4555554 68899999999999999887642110
Q ss_pred ------------------------Cc----------------cCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 304 ------------------------RK----------------FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 304 ------------------------~~----------------~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
.+ ...+++|.+++||+++++++.++++..++ ++++ +|
T Consensus 383 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~-~Y 459 (700)
T PTZ00216 383 LPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQ-GW 459 (700)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhh-cc
Confidence 00 00158999999999999999988877764 8999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCC-ccCCCCCceEEEEecCCcccCccccCChhhhhhhcccc
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTL-KPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 422 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~-~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~ 422 (436)
|+||+++.++..... +...+++|+|+++++++|+|.++. ...+++..|||+|+|++++.| ||++|+.|.+.|.
T Consensus 460 G~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~G--Y~~~pe~T~~~f~-- 533 (700)
T PTZ00216 460 GLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKG--YYKQEELTREVLD-- 533 (700)
T ss_pred CcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccch--hcCChhHhhhhcc--
Confidence 999998766655443 456789999999999999996432 234566789999999999999 9999999999883
Q ss_pred ccCCeeecCCCCC
Q 013780 423 HTDSFIRGKDQQT 435 (436)
Q Consensus 423 ~~~~~~~tgD~~~ 435 (436)
.+|||+|||+|+
T Consensus 534 -~dGw~~TGDig~ 545 (700)
T PTZ00216 534 -EDGWFHTGDVGS 545 (700)
T ss_pred -ccCCeeccceEE
Confidence 578999999984
No 25
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.7e-52 Score=420.17 Aligned_cols=385 Identities=25% Similarity=0.306 Sum_probs=316.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCC----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~ 102 (436)
.|+.+.|.+.++.+|+++|+++.+.+ +.+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~ 103 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRI 103 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 67999999999999999999976322 78999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch-----HHHHhhc----C-CCcEEeccCCccccccccccCcccchhh
Q 013780 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPEL-----WDKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFH 172 (436)
Q Consensus 103 G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (436)
|++++|++|.++.+++.++++.++++++++++.. .+.+... . .+.++.... .+..++.
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 171 (547)
T PRK13295 104 GAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGG------------DGADSFE 171 (547)
T ss_pred CcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecC------------CCccCHH
Confidence 9999999999999999999999999999998753 1112111 1 112221111 0112333
Q ss_pred HHhhhcC-----C-CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHH
Q 013780 173 DLIELSG-----S-VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (436)
Q Consensus 173 ~~~~~~~-----~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 246 (436)
++..... . ..........++++++++|||||||.||+|+++|+++..++........+.. ++++++..|++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~l~~~p~~h 249 (547)
T PRK13295 172 ALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGA--DDVILMASPMAH 249 (547)
T ss_pred HHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCC--CCeEEEecCchh
Confidence 3332110 0 0011122346789999999999999999999999999888776555554433 399999999999
Q ss_pred HHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHH
Q 013780 247 VFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (436)
Q Consensus 247 ~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~ 326 (436)
.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........+++||.+++||+++++++.
T Consensus 250 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~ 329 (547)
T PRK13295 250 QTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALV 329 (547)
T ss_pred hhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHH
Confidence 99988788999999999999998999999999999999999999999999998776666778999999999999999999
Q ss_pred HHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCc
Q 013780 327 EDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGI 406 (436)
Q Consensus 327 ~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~ 406 (436)
+++++.++ +++++ .||+||++.+.+............++|+|+++++++|+|+ ++.+++.|+.|||+++|+.++.|
T Consensus 330 ~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g~~~~~g- 405 (547)
T PRK13295 330 ERARAALG-AKIVS-AWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDA-DGAPLPAGQIGRLQVRGCSNFGG- 405 (547)
T ss_pred HHHHHHhC-CCeEE-eccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECC-CCCCCCCCCCCeEEEEcCccccc-
Confidence 99999995 99999 9999999876554432211234568999999999999995 78999999999999999999999
Q ss_pred cccCChhhhhhhccccccCCeeecCCCCC
Q 013780 407 VYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 407 ~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+++|+.+... .+|||+|||+|+
T Consensus 406 -Y~~~~~~t~~~-----~~g~~~TGD~~~ 428 (547)
T PRK13295 406 -YLKRPQLNGTD-----ADGWFDTGDLAR 428 (547)
T ss_pred -ccCCccccccC-----CCCCeecceEEE
Confidence 99999988765 367999999864
No 26
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.6e-53 Score=428.87 Aligned_cols=407 Identities=22% Similarity=0.215 Sum_probs=305.2
Q ss_pred CCCcCCCCCCCchHHHH-hhhccc--CCCceEEEeCCC----CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC
Q 013780 17 PPLVLPSDPSFSMVHFL-FRNSAS--YSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS 89 (436)
Q Consensus 17 ~~~~~~~~~~~ti~~~l-~~~~~~--~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~ 89 (436)
...|+++. ..|+...+ .++++. +|+++|+++... .+.+||+||.+++.++|+.|+++|+++||+|+++++|+
T Consensus 49 ~~~wf~~~-~~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~ 127 (647)
T PTZ00237 49 YPDWFKGG-ELNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANT 127 (647)
T ss_pred chhhCCCC-eeeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC
Confidence 34677753 36665555 455543 799999987421 26899999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc---------hHHHHhhc---C---CCcEEeccCC
Q 013780 90 IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE---------LWDKVKDL---N---LPAVLLGSKD 154 (436)
Q Consensus 90 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~---------~~~~~~~~---~---~~~~~~~~~~ 154 (436)
+++++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.+. . ...++.....
T Consensus 128 ~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 207 (647)
T PTZ00237 128 LEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRN 207 (647)
T ss_pred HHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcC
Confidence 9999999999999999999999999999999999999999999752 11222111 1 1122221110
Q ss_pred c--ccccc----ccccCcccchhhHHhhhcCC---CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHH-HhhhhhH
Q 013780 155 K--VSSSG----LISRSSKIVSFHDLIELSGS---VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNF-IAASLMI 224 (436)
Q Consensus 155 ~--~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l-~~~~~~~ 224 (436)
. ..... .....+....+++++..... ..........++++++|+|||||||.||+|+++|.++ .......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~ 287 (647)
T PTZ00237 208 DITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYW 287 (647)
T ss_pred CcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHH
Confidence 0 00000 00001122345555542110 0111223456789999999999999999999999984 3322221
Q ss_pred HhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCC--CC----HHHHHHHHHHhcceEEEecHHHHHHHH
Q 013780 225 SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK--FD----IEMALRAIEKYRVTVWWVVPPIILALA 298 (436)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~--~~----~~~~~~~l~~~~~t~l~~~p~~~~~l~ 298 (436)
...... ..++++++..|++|+.+.. .++.+|..|+++++.+. +. +..+++.++++++|+++++|++++.|.
T Consensus 288 ~~~~~~--~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 364 (647)
T PTZ00237 288 RSIIEK--DIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLI 364 (647)
T ss_pred HHhcCC--CCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHH
Confidence 122222 2238999999999987654 68899999999998753 22 688999999999999999999999998
Q ss_pred hccc-----cCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCC
Q 013780 299 KNSL-----VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAG 373 (436)
Q Consensus 299 ~~~~-----~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~ 373 (436)
+... ....++++||.+++||+++++++.+++++.++ +++++ .||+||+++.++..... .....+++|+|+|+
T Consensus 365 ~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g-~~i~~-~yG~TE~~~~~~~~~~~-~~~~~~s~G~p~~g 441 (647)
T PTZ00237 365 KTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLK-IKSSR-GYGQTEIGITYLYCYGH-INIPYNATGVPSIF 441 (647)
T ss_pred hhCccccccccccCcchheEEEecCccCCHHHHHHHHHhcC-CCEEe-eechHHhChhhhccCCC-CCCCCCCCccCcCC
Confidence 7532 13457899999999999999999999999997 99999 99999998665543332 13345899999999
Q ss_pred cEEEEEeCCCCccCCCCCceEEEEecC---CcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 374 VEAQIVSVDTLKPLPPNQLGEIWVRGP---NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 374 ~~v~i~d~~~~~~~~~g~~Gel~v~g~---~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++++|+|+ +|++++.|+.|||++++| +++.| ||++++.+.+.|. ..+|||+|||+|+
T Consensus 442 ~~~~i~d~-~g~~~~~ge~GEl~v~~p~~p~~~~g--y~~~~~~~~~~f~--~~~g~~~TGDlg~ 501 (647)
T PTZ00237 442 IKPSILSE-DGKELNVNEIGEVAFKLPMPPSFATT--FYKNDEKFKQLFS--KFPGYYNSGDLGF 501 (647)
T ss_pred ceEEEECC-CCCCCCCCCceEEEEeccCCchhhCc--eeCCHHHHHHHHh--CCCCEEECCcEEE
Confidence 99999995 899999999999999986 78999 9999999887652 1257999999873
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-52 Score=421.78 Aligned_cols=388 Identities=27% Similarity=0.383 Sum_probs=317.6
Q ss_pred CchH-HHHhhhcc-cCCCceEEEeCC--CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 013780 27 FSMV-HFLFRNSA-SYSSKLALIDAD--SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (436)
Q Consensus 27 ~ti~-~~l~~~~~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~ 102 (436)
+|+. +.+.++++ .+|+++|+++.+ ..+.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 5666 46677766 579999998753 2378999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC---CCcEEeccCCccccccccccCcccchhhHHhhhcC
Q 013780 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (436)
Q Consensus 103 G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (436)
|++++|+++.++.+++.++++.++++++++++.......... .+.+++..+.. ....+...+.+++....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 194 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDV-------EEGPGTLDFNALMEQAS 194 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCc-------CCCcCccCHHHHHhhcC
Confidence 999999999999999999999999999999987654432211 12222221110 11123345666554433
Q ss_pred CCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhcc
Q 013780 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (436)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 259 (436)
.........++++++++|||||||.||+|+++|+++..+.........+.. .+++++..|++|.+|+...++.++.
T Consensus 195 --~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~g~~~~~~~~l~ 270 (570)
T PRK04319 195 --DEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHE--DDVYWCTADPGWVTGTSYGIFAPWL 270 (570)
T ss_pred --CcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCC--CceEEecCChHHhhCchHHHHHHHh
Confidence 222334456789999999999999999999999999887665544444433 3899999999999998778999999
Q ss_pred CCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccc--cCccCCCcceEEEecCCCCcHHHHHHHHhhCCCC
Q 013780 260 KGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (436)
Q Consensus 260 ~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~ 336 (436)
.|+++++.. .+++..+++.++++++|+++++|+++..|.+... ....++++||.+++||+++++++.+++++.++ .
T Consensus 271 ~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~ 349 (570)
T PRK04319 271 NGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFG-L 349 (570)
T ss_pred cCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhC-C
Confidence 999998874 6899999999999999999999999999987643 23456889999999999999999999999997 8
Q ss_pred eeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEec--CCcccCccccCChhh
Q 013780 337 TIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG--PNVTPGIVYINFFVF 414 (436)
Q Consensus 337 ~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g--~~~~~g~~Y~~~~~~ 414 (436)
++++ .||+||+++.+....... ...++++|+|+|+++++|+|+ ++.++++|+.|||+++| +.++.| ||++++.
T Consensus 350 ~i~~-~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~g~~~~i~d~-~~~~~~~g~~Gel~i~~~~~~~~~G--Y~~~~~~ 424 (570)
T PRK04319 350 PIHD-NWWMTETGGIMIANYPAM-DIKPGSMGKPLPGIEAAIVDD-QGNELPPNRMGNLAIKKGWPSMMRG--IWNNPEK 424 (570)
T ss_pred CeEe-ceeecccCCEEEecCCCC-CCCCCcCcCCCCCCEEEEECC-CCCCCCCCCceEEEEcCCCChHHhH--hcCCHHH
Confidence 9999 999999987655443321 456789999999999999995 78889999999999997 899999 9999999
Q ss_pred hhhhccccccCCeeecCCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.+.| .+|||+|||+++
T Consensus 425 ~~~~~----~~gw~~TGDl~~ 441 (570)
T PRK04319 425 YESYF----AGDWYVSGDSAY 441 (570)
T ss_pred hhhhh----cCCceEeCcEEE
Confidence 99887 478999999864
No 28
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-52 Score=416.97 Aligned_cols=392 Identities=26% Similarity=0.383 Sum_probs=330.8
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
...|+.++|.++++++|+++|+.+. +..+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 3478999999999999999999987 69999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC----CcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
+++|+++.++.+++..+++.++++++++++.....+..... ........ .........+..+.++.....
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~- 160 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLV-----LGGREAPGGWLDFADWAEAGS- 160 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeec-----ccccccccchhhHHHHHhcCC-
Confidence 99999999999999999999999999999887666543211 11111000 000011223445555544333
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
..........+++++++|||||||.||+|.++|+++..+.........+... +++++.+|++|.+++...++.++..
T Consensus 161 -~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~--~~~~~~~p~~h~~g~~~~~~~~~~~ 237 (523)
T PRK08316 161 -VAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSAD--DIPLHALPLYHCAQLDVFLGPYLYV 237 (523)
T ss_pred -CccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCC--ceEEEccCCchhhhHHHHHHHHHhc
Confidence 2223445677899999999999999999999999998887665555554333 9999999999999987667788999
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 261 G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
|+++++.+..++..+++.++++++|++.++|+++..|.+.......+++++|.+++||++++.++.+.+++.+++.++++
T Consensus 238 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 317 (523)
T PRK08316 238 GATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYN 317 (523)
T ss_pred CceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceee
Confidence 99999998889999999999999999999999999999887766678899999999999999999999999997799999
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 420 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~ 420 (436)
.||+||++.+.............+++|+|+++++++|+|+ ++.+++.|+.|||+++|+.++.| |+++++.+.+.|
T Consensus 318 -~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~~Gei~v~~~~~~~~--y~~~~~~~~~~~- 392 (523)
T PRK08316 318 -CYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDD-DGNDVAPGEVGEIVHRSPQLMLG--YWDDPEKTAEAF- 392 (523)
T ss_pred -eecccccCccccccCccccccccCCcccCCCCcEEEEEcC-CCCCCCCCCcceEEEECCchhhh--hcCCHHHHHHHh-
Confidence 9999999887666544332456789999999999999994 78999999999999999999999 999999999888
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
.++||+|||+|.
T Consensus 393 ---~~~~~~TGDl~~ 404 (523)
T PRK08316 393 ---RGGWFHSGDLGV 404 (523)
T ss_pred ---hCCCeeccceEE
Confidence 588999999863
No 29
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-52 Score=427.09 Aligned_cols=386 Identities=23% Similarity=0.303 Sum_probs=300.0
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCCC--C--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDADS--D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVI 100 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~ 100 (436)
...|+.+.|.++++++|+++|+++.+. + +.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 47 ~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 126 (624)
T PRK12582 47 YPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAM 126 (624)
T ss_pred cccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 347899999999999999999987532 2 689999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeecCCCCCH-----HHHHHHHHhcCCcEEEEccch-HH-HHhhc---CCCcEEeccCCccccccccccCcccch
Q 013780 101 AIGAIASTANPVYTV-----SELSKQVKDSNPKLVITVPEL-WD-KVKDL---NLPAVLLGSKDKVSSSGLISRSSKIVS 170 (436)
Q Consensus 101 ~~G~~~v~l~~~~~~-----~~~~~~l~~~~~~~vi~~~~~-~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (436)
++|++++|++|.++. +++.++++.++++++|+++.. .. .+... ..+.+.+... ........
T Consensus 127 ~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~ 197 (624)
T PRK12582 127 QAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGP---------GEGIASIA 197 (624)
T ss_pred HcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCC---------Cccccccc
Confidence 999999999999874 899999999999999998642 11 11111 1122211111 01112234
Q ss_pred hhHHhhhcCCCC-CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhHHHHH
Q 013780 171 FHDLIELSGSVT-DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVF 248 (436)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~ 248 (436)
+.++........ ........++++++|+|||||||.||+|++||+++..+............. ..+++++++|++|.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~ 277 (624)
T PRK12582 198 FADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTM 277 (624)
T ss_pred HHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHH
Confidence 555443322100 011123457899999999999999999999999998876554333222221 137999999999999
Q ss_pred HHHHHHHhhccCCcEEEEcC-CCCH---HHHHHHHHHhcceEEEecHHHHHHHHhcccc----CccCCCcceEEEecCCC
Q 013780 249 GLSVILYDQLQKGNCVVSMG-KFDI---EMALRAIEKYRVTVWWVVPPIILALAKNSLV----RKFDISSLKLVGSGAAP 320 (436)
Q Consensus 249 g~~~~~~~~l~~G~~v~~~~-~~~~---~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~~~l~~lr~i~~gg~~ 320 (436)
|+...++.++..|+++++.+ .+.+ ..+++.++++++|+++++|.++..|.+.... ....+++||.+++||++
T Consensus 278 g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~ 357 (624)
T PRK12582 278 GGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGAT 357 (624)
T ss_pred hHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCC
Confidence 98767788999999999875 3333 4567778999999999999999988764322 22347899999999999
Q ss_pred CcHHHHHHHHhhC----C-CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEE
Q 013780 321 LGKELMEDCQKNI----P-GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEI 395 (436)
Q Consensus 321 l~~~~~~~~~~~~----~-~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel 395 (436)
+++++.+++++.+ + ++++++ .||+||+++++...... ..+.+++|+|+||++++|++ .|+.|||
T Consensus 358 l~~~~~~~~~~~~~~~~g~~~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~--------~G~~GEl 426 (624)
T PRK12582 358 LSDDLYERMQALAVRTTGHRIPFYT-GYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP--------VGDKYEV 426 (624)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEe-ccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--------CCCceEE
Confidence 9999999999863 3 368899 99999998766533332 45678999999999999974 3778999
Q ss_pred EEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 396 WVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 396 ~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+++|++++.| ||++|+.+.+.| ..+|||+|||+|+
T Consensus 427 ~vrg~~v~~G--Y~~~p~~t~~~f---~~dgw~~TGDlg~ 461 (624)
T PRK12582 427 RVKGPNVTPG--YHKDPELTAAAF---DEEGFYRLGDAAR 461 (624)
T ss_pred EEECCccccc--ccCCccchhhhc---CccCCccccceEE
Confidence 9999999999 999999998877 2578999999874
No 30
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-52 Score=414.55 Aligned_cols=391 Identities=27% Similarity=0.410 Sum_probs=327.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.+.++.+|+++|+++. +..+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~ 82 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVV 82 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 77999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHHhhhcCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (436)
+++++..+.+++..++++++++++++++.......... .+.+++....... .......++.++.....
T Consensus 83 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-- 155 (513)
T PRK07656 83 VPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDD-----PHTEKMKTFTDFLAAGD-- 155 (513)
T ss_pred EecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccc-----cCccccccHHHHHhcCC--
Confidence 99999999999999999999999999987655443321 2222222221100 00112235555554433
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCC
Q 013780 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (436)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 261 (436)
..........+++++++|||||||.||+|.++|.++...+........+.. .+++++.+|++|.+++...++.++..|
T Consensus 156 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~G 233 (513)
T PRK07656 156 PAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTE--GDRYLAANPFFHVFGYKAGVNAPLMRG 233 (513)
T ss_pred CCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCC--CCeEEEccchHHHHHHHHHHHHHHHcC
Confidence 222334457789999999999999999999999999887766555544433 399999999999999987899999999
Q ss_pred cEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 262 ~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
+++++.+.+++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++++.+++++.++...+++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~- 312 (513)
T PRK07656 234 ATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLT- 312 (513)
T ss_pred ceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEe-
Confidence 9999998889999999999999999999999999999987776678899999999999999999999999998338999
Q ss_pred cccccccCCcccccCCCCC-ccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc
Q 013780 342 GYGMTETCAPISLENPLVG-VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 420 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~-~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~ 420 (436)
.||+||+++++........ ...++++|.|+++++++|+|+ ++.+++.|+.|||+++|+.++.| |+++++.+...+
T Consensus 313 ~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~- 388 (513)
T PRK07656 313 GYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNE-LGEEVPVGEVGELLVRGPNVMKG--YYDDPEATAAAI- 388 (513)
T ss_pred EEccccCCCceeecCccccccccCCCccccCCCcEEEEECC-CCCCCCCCCceEEEEEcchhhhh--hcCCHHHHhhhh-
Confidence 9999999887766544321 123689999999999999995 89999999999999999999999 999999888776
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
..++||+|||+|+
T Consensus 389 --~~~~~~~tGDl~~ 401 (513)
T PRK07656 389 --DADGWLHTGDLGR 401 (513)
T ss_pred --ccCCceeccceEE
Confidence 3478999999873
No 31
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=6e-52 Score=422.39 Aligned_cols=404 Identities=23% Similarity=0.281 Sum_probs=312.8
Q ss_pred CcCCCCCCCchHH-HHhhhcccCCCceEEEeCCC----CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHH
Q 013780 19 LVLPSDPSFSMVH-FLFRNSASYSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP 93 (436)
Q Consensus 19 ~~~~~~~~~ti~~-~l~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~ 93 (436)
.|+++. ..|+.. .|.++++.+|+++|+++... .+.+||+||.+++.++|+.|+++|+++||+|+++++|+++++
T Consensus 49 ~wf~~~-~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 127 (625)
T TIGR02188 49 KWFVGG-ELNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA 127 (625)
T ss_pred eeCCCC-EEEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 455542 255555 45567788999999987532 268999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH---------HH----hhcC--CCcEEeccCCcccc
Q 013780 94 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KV----KDLN--LPAVLLGSKDKVSS 158 (436)
Q Consensus 94 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~----~~~~--~~~~~~~~~~~~~~ 158 (436)
+++|||+++|++++++++.++.+++.+++++++++++|+++.... .+ .... .+.+++..... ..
T Consensus 128 ~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 206 (625)
T TIGR02188 128 IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTG-NP 206 (625)
T ss_pred HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCC-CC
Confidence 999999999999999999999999999999999999999875321 11 1111 12122211100 00
Q ss_pred ccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhH-HhhhhccCCCCcE
Q 013780 159 SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMI-SAHQELVGELDHV 237 (436)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~ 237 (436)
.. ........++++..... .........++++++|+|||||||.||+|+++|+++..+.... .....+ ...|+
T Consensus 207 ~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~ 280 (625)
T TIGR02188 207 VP--WVEGRDVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDI--KDGDI 280 (625)
T ss_pred cC--ccccccccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCC--CCCcE
Confidence 00 00011223555544332 2223344567899999999999999999999999987554322 122222 23399
Q ss_pred EEechhHHHHHHHHHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcc
Q 013780 238 VLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSL 311 (436)
Q Consensus 238 ~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~l 311 (436)
+++..|++|+.+....++.+|..|+++++.+. +++..+++.++++++|+++++|++++.|.+.... ...++++|
T Consensus 281 ~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~l 360 (625)
T TIGR02188 281 FWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSL 360 (625)
T ss_pred EEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccce
Confidence 99999999999887678999999999998742 4799999999999999999999999999886532 33568899
Q ss_pred eEEEecCCCCcHHHHHHHHhhCC--CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCC-
Q 013780 312 KLVGSGAAPLGKELMEDCQKNIP--GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP- 388 (436)
Q Consensus 312 r~i~~gg~~l~~~~~~~~~~~~~--~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~- 388 (436)
|.+++||+++++++.+++.+.++ ++++++ .||+||+++.++...+.....+++++|+|+++++++|+| ++|++++
T Consensus 361 r~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~-~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~ 438 (625)
T TIGR02188 361 RLLGSVGEPINPEAWMWYYKVVGKERCPIVD-TWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEG 438 (625)
T ss_pred eEEEEecCCCCHHHHHHHHHHcCCCCCceEe-cccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCC
Confidence 99999999999999999999986 378999 999999988765543332245788999999999999999 6899999
Q ss_pred CCCceEEEEec--CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 389 PNQLGEIWVRG--PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 389 ~g~~Gel~v~g--~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+|+.|||+++| |+++.| ||++++.+.+.+. -..+|||+|||+|+
T Consensus 439 ~g~~GeL~v~~p~p~~~~g--y~~~~~~~~~~~~-~~~~g~~~TGDl~~ 484 (625)
T TIGR02188 439 PGEGGYLVIKQPWPGMLRT--IYGDHERFVDTYF-SPFPGYYFTGDGAR 484 (625)
T ss_pred CCCeEEEEEccCCCccccc--ccCChHHHHHHHh-ccCCCEEECCceEE
Confidence 89999999999 689999 9999988776541 11357999999874
No 32
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4e-52 Score=423.26 Aligned_cols=406 Identities=22% Similarity=0.273 Sum_probs=311.3
Q ss_pred CCcCCCCCCCchH-HHHhhhcccCCCceEEEeCC----CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcH
Q 013780 18 PLVLPSDPSFSMV-HFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (436)
Q Consensus 18 ~~~~~~~~~~ti~-~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~ 92 (436)
..|+++. ..|+. +.|.++++++|+++|+++.. ..+.+||+||.+++.++|+.|.++|+++||+|+++++|++++
T Consensus 43 ~~wf~~~-~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~ 121 (628)
T TIGR02316 43 ARWFAGG-RTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA 121 (628)
T ss_pred CccCCCC-EeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH
Confidence 3555553 36665 56677888899999998731 237899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHh----hc--CCCcEEeccCCccc
Q 013780 93 PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVK----DL--NLPAVLLGSKDKVS 157 (436)
Q Consensus 93 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~----~~--~~~~~~~~~~~~~~ 157 (436)
++++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+. .. ....+++.......
T Consensus 122 v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 201 (628)
T TIGR02316 122 VFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP 201 (628)
T ss_pred HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999999986431 1111 11 11222222111000
Q ss_pred cccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhh-hhHHhhhhccCCCCc
Q 013780 158 SSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAAS-LMISAHQELVGELDH 236 (436)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~ 236 (436)
..........+.++...... .........++++++|+|||||||.||||+++|.++..+. ........+ ..+|
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d 275 (628)
T TIGR02316 202 ---MRLIPGRDVDYAALRTQHED-AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGI--RAGQ 275 (628)
T ss_pred ---cCcccCccccHHHHhhcccc-CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCc
Confidence 00001112345554433211 1112223467899999999999999999999999986432 222223333 2339
Q ss_pred EEEechhHHHHHHHHHHHHhhccCCcEEEEcC----CCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCc
Q 013780 237 VVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG----KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISS 310 (436)
Q Consensus 237 ~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~----~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~ 310 (436)
++++..|+.|+.++...++.+|..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.... ...++++
T Consensus 276 ~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~ 355 (628)
T TIGR02316 276 VMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSS 355 (628)
T ss_pred EEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccc
Confidence 99999999999998767899999999999975 34789999999999999999999999998876432 3457899
Q ss_pred ceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCC--CccCcCccccccCCcEEEEEeCCCCccCC
Q 013780 311 LKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLV--GVRRSGSAGTLVAGVEAQIVSVDTLKPLP 388 (436)
Q Consensus 311 lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~--~~~~~~~~G~p~~~~~v~i~d~~~~~~~~ 388 (436)
||.+++||+++++++.+++++.++ ..+++ .||+||++..++...... ...+.+++|+|+|+++++|+|+++|++++
T Consensus 356 lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~-~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~ 433 (628)
T TIGR02316 356 LHWLFLAGEPLDEPTAHWITDGLG-KPVID-NYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCG 433 (628)
T ss_pred eeEEEEecCCCCHHHHHHHHHHhC-CCEEe-cccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCC
Confidence 999999999999999999999987 88999 999999985444332211 13456899999999999999976899999
Q ss_pred CCCceEEEEecC---CcccCccccCChhhhhhhc-cccccCCeeecCCCCC
Q 013780 389 PNQLGEIWVRGP---NVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQT 435 (436)
Q Consensus 389 ~g~~Gel~v~g~---~~~~g~~Y~~~~~~~~~~~-~~~~~~~~~~tgD~~~ 435 (436)
.|+.|||+++|| .++.| ||++++.+.+.+ ..+ .++||+|||+|+
T Consensus 434 ~g~~Gel~v~gp~~~g~~~~--~~~~~~~~~~~~~~~~-~~~~~~TGD~g~ 481 (628)
T TIGR02316 434 PNEKGVLTVVPPLPPGCLST--VWGDDARFLKTYWSHF-KRPLYSSFDWGI 481 (628)
T ss_pred CCCcEEEEEecCCCcccccc--ccCChHHHHHhhhhcC-CCCEEECCceEE
Confidence 999999999998 46789 999998877654 212 367999999874
No 33
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.3e-52 Score=418.06 Aligned_cols=385 Identities=23% Similarity=0.319 Sum_probs=303.1
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCC--------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSD--------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA 98 (436)
+|+.+.|.+.++++|+++|+++.+.+ ..+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++|
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 78999999999999999999886432 2899999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc--chHHHHhhcC---CCcEEeccCCccccccccccCcccchhhH
Q 013780 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP--ELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHD 173 (436)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (436)
|+++|++++|++|.++.+++.+++++++++++|+++ ...+.+.... ....+.... ........+.+
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~~~~~~~~~ 156 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGG---------RLLWGGTTLAT 156 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheecccc---------ccccCCccHHH
Confidence 999999999999999999999999999999999975 2222222111 111111111 00111123444
Q ss_pred HhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH
Q 013780 174 LIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (436)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 253 (436)
+...... .........++++++++|||||||.||+|+++|+++..++........+.. .++.++.+|++|.+++
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~pl~~~~~~--- 230 (552)
T PRK09274 157 LLRDGAA-APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEP--GEIDLPTFPLFALFGP--- 230 (552)
T ss_pred hcccCcc-ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCC--CceeeeccCHHHhhhh---
Confidence 3322111 122233456789999999999999999999999999988776655554433 3899999999886554
Q ss_pred HHhhccCCcEEEEcC-------CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHH
Q 013780 254 LYDQLQKGNCVVSMG-------KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~-------~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~ 326 (436)
..|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.......++++||.+++||+++++++.
T Consensus 231 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~ 305 (552)
T PRK09274 231 -----ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVI 305 (552)
T ss_pred -----hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHH
Confidence 3477777653 4689999999999999999999999999998766566688999999999999999999
Q ss_pred HHHHhhCC-CCeeeeccccccccCCcccccCCC------C--CccCcCccccccCCcEEEEEeCC--------CCccCCC
Q 013780 327 EDCQKNIP-GATIFQVGYGMTETCAPISLENPL------V--GVRRSGSAGTLVAGVEAQIVSVD--------TLKPLPP 389 (436)
Q Consensus 327 ~~~~~~~~-~~~i~~~~YG~tE~~~~~~~~~~~------~--~~~~~~~~G~p~~~~~v~i~d~~--------~~~~~~~ 389 (436)
+++++.|+ ++++++ .||+||++++++..... . ......++|+|+|+++++|+|++ ++++++.
T Consensus 306 ~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~ 384 (552)
T PRK09274 306 ERFRAMLPPDAEILT-PYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLAT 384 (552)
T ss_pred HHHHHHcCCCceEEc-cccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCC
Confidence 99999997 379999 99999998765543211 0 01223479999999999999952 4678999
Q ss_pred CCceEEEEecCCcccCccccCChhhhhhhccccccCC--eeecCCCCC
Q 013780 390 NQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS--FIRGKDQQT 435 (436)
Q Consensus 390 g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~--~~~tgD~~~ 435 (436)
|+.|||+++|++++.| ||++|+.+...|- .+.++ ||+|||+|+
T Consensus 385 g~~Gel~v~g~~~~~G--Y~~~~~~t~~~~~-~~~~g~~w~~TGDlg~ 429 (552)
T PRK09274 385 GEIGEIVVAGPMVTRS--YYNRPEATRLAKI-PDGQGDVWHRMGDLGY 429 (552)
T ss_pred CCeeEEEEecCccccc--ccCChHHhhhhhc-ccCCCCcEEEcCCEEE
Confidence 9999999999999999 9999999887651 12344 999999874
No 34
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.3e-52 Score=417.68 Aligned_cols=399 Identities=28% Similarity=0.370 Sum_probs=323.4
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
++|+.+.|.++++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 108 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAV 108 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 368999999999999999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCcccc------------------ccccc
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSS------------------SGLIS 163 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~------------------~~~~~ 163 (436)
++|++|.++.+++.+++++++++++|+++.....+.... .+.++......... .....
T Consensus 109 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 109 VVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred EeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999887655443321 11221111000000 00000
Q ss_pred cCcccchhhHHhhhcCCCC--CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEec
Q 013780 164 RSSKIVSFHDLIELSGSVT--DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCV 241 (436)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (436)
...+...|.++........ .........+++++++|||||||.||+|.++|+++..++.............++++++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAA 268 (573)
T ss_pred CCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEe
Confidence 1123334555544322100 01223356789999999999999999999999999877654322221112224899999
Q ss_pred hhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCC
Q 013780 242 LPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL 321 (436)
Q Consensus 242 ~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l 321 (436)
+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|++++.|.+........+++||.+++||+++
T Consensus 269 ~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~~l 348 (573)
T PRK05605 269 LPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAMAL 348 (573)
T ss_pred cChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCCcC
Confidence 99999999877788889999999999888999999999999999999999999999988776777889999999999999
Q ss_pred cHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCC-CccCCCCCceEEEEecC
Q 013780 322 GKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT-LKPLPPNQLGEIWVRGP 400 (436)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~-~~~~~~g~~Gel~v~g~ 400 (436)
++++.+.+.+.++ ..+++ .||+||+++++....... ..+++++|+|+++++++|+|+++ +.+++.|+.|||+++|+
T Consensus 349 ~~~~~~~~~~~~~-~~i~~-~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~ 425 (573)
T PRK05605 349 PVSTVELWEKLTG-GLLVE-GYGLTETSPIIVGNPMSD-DRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGP 425 (573)
T ss_pred CHHHHHHHHHHhC-CCeec-ccccchhchhhhcCCccc-CCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecC
Confidence 9999999999886 89999 999999987766554332 44578999999999999999766 68999999999999999
Q ss_pred CcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 401 NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 401 ~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.++.| |+++++.+.+.| .+|||+|||+|.
T Consensus 426 ~~~~g--y~~~~~~~~~~~----~~g~~~TGD~~~ 454 (573)
T PRK05605 426 QVFKG--YWNRPEETAKSF----LDGWFRTGDVVV 454 (573)
T ss_pred chhhh--hcCChhHhhhcc----cCCCcccCCEEE
Confidence 99999 999999998877 356999999763
No 35
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-52 Score=410.10 Aligned_cols=370 Identities=20% Similarity=0.246 Sum_probs=307.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
|++.+.|.++++++|+++|+++. +..+||.||.++++++|+.|.+.|. +|++|+|+++|++++++++|||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 57899999999999999999987 7899999999999999999999884 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|+++.++.+++.++++.+++++++++......+....... +..+ .+........ .....
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~----------------~~~~~~~~~~--~~~~~ 137 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRV--IEID----------------EWKRMIEKYL--PTYAP 137 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceE--EEeh----------------hhhhhhhhcc--ccccc
Confidence 99999999999999999999999999986554443221111 1111 1111111111 11112
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
.....+++++|+|||||||.||+|+++|+++..++........+.. .|+++...|++|..++. .++.++..|+++++
T Consensus 138 ~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~~~~~~l~~~~~l~-~~~~~l~~g~~~~~ 214 (487)
T PRK07638 138 IENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKR--EDSVLIAGTLVHSLFLY-GAISTLYVGQTVHL 214 (487)
T ss_pred cccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCC--CCEEEEeecchHHHHHH-HHHHHHccCcEEEE
Confidence 2234567899999999999999999999999888776555444433 39999999999988764 78889999999999
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMT 346 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~t 346 (436)
.+.+++..+++.++++++|++.++|+++..|.+... ...+.+.++++|+++++++.+++++.+++.++++ .||+|
T Consensus 215 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~-~YG~t 289 (487)
T PRK07638 215 MRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYE-FYGAS 289 (487)
T ss_pred cCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEE-EecCC
Confidence 999999999999999999999999999999988732 2345566778889999999999999998899999 99999
Q ss_pred ccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCC
Q 013780 347 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS 426 (436)
Q Consensus 347 E~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~ 426 (436)
|++.++...... ...+..++|+|+++++++|+| ++|.++++|+.|||+++|+.++.| ||++++.+.+.+ .++
T Consensus 290 E~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~~g 361 (487)
T PRK07638 290 ELSFVTALVDEE-SERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMG--YIIGGVLARELN----ADG 361 (487)
T ss_pred ccCceEEecccc-cCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceee--ecCCHHHHhhhc----cCC
Confidence 998766554322 245678999999999999999 489999999999999999999999 999998877755 578
Q ss_pred eeecCCCCC
Q 013780 427 FIRGKDQQT 435 (436)
Q Consensus 427 ~~~tgD~~~ 435 (436)
||+|||++.
T Consensus 362 ~~~TGDl~~ 370 (487)
T PRK07638 362 WMTVRDVGY 370 (487)
T ss_pred cEecCccEe
Confidence 999999873
No 36
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-51 Score=415.36 Aligned_cols=396 Identities=22% Similarity=0.383 Sum_probs=315.8
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.|+.+.|.+.++++|+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~ 101 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 58999999999999999999976 6899999999999999999987 69999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhc----CCCcEEeccCCc-ccccc---------------ccccC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL----NLPAVLLGSKDK-VSSSG---------------LISRS 165 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~---------------~~~~~ 165 (436)
++|++|.++.+++.++++.++++++|++....+.+... ..+.+++..... ..... .....
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK05677 102 VVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHL 181 (562)
T ss_pred EeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCC
Confidence 99999999999999999999999999987655433322 122222211000 00000 00001
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhH
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPM 244 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~ 244 (436)
+....+.+.+..... .........++++++++|||||||.||+|+++|+++..++............ ..+.+++.+|+
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl 260 (562)
T PRK05677 182 PQAVKFNDALAKGAG-QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPL 260 (562)
T ss_pred cccccHHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcH
Confidence 122233433332221 1122334567899999999999999999999999998776544333322111 22789999999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcH
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~ 323 (436)
+|.+++...++..+..|++.++. .++++..+++.++++++|+++++|+++..+..........++++|.+++||+++++
T Consensus 261 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~~~ 340 (562)
T PRK05677 261 YHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMALQL 340 (562)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccCCH
Confidence 99999876777788888876665 46789999999999999999999999999988765555567899999999999999
Q ss_pred HHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcc
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVT 403 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~ 403 (436)
++.++|++.++ +++++ .||+||+++++...... ..+++++|+|+++++++|+|+ ++..++.|+.|||+++|+.++
T Consensus 341 ~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Gel~v~g~~~~ 415 (562)
T PRK05677 341 ATAERWKEVTG-CAICE-GYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVGELCVKGPQVM 415 (562)
T ss_pred HHHHHHHHHcC-CCeec-cCCccccCcceeecCcc--CCCCCccCccCCCCEEEEECC-CCCCCCCCCCeEEEEecCccc
Confidence 99999999986 99999 99999998766654433 456789999999999999995 789999999999999999999
Q ss_pred cCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 404 PGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 404 ~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.| |+++|+.+.+.| ..++||+|||+|+
T Consensus 416 ~g--Y~~~~~~t~~~~---~~~g~~~TGDlg~ 442 (562)
T PRK05677 416 KG--YWQRPEATDEIL---DSDGWLKTGDIAL 442 (562)
T ss_pred hh--hcCCchhhhhcc---CCCCcccccceEE
Confidence 99 999999998876 3578999999863
No 37
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-53 Score=373.61 Aligned_cols=383 Identities=23% Similarity=0.317 Sum_probs=325.8
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.+.|.++++++|+++|+++. ++.|||+||.++++++|..|++.||++||+|.+.+||..+|++++||++++|+.+
T Consensus 28 ~~l~d~L~~~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~P 105 (542)
T COG1021 28 RTLTDILTDHAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAP 105 (542)
T ss_pred CcHHHHHHHHHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcch
Confidence 68999999999999999999998 7889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccch--------HHHHhhc-C-CCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPEL--------WDKVKDL-N-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~--------~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
|..=|.....|+.+....++++.+|.+..+ .+.+... . .+.+++..+. .. .......+.
T Consensus 106 VlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~----------~~-~~~~~~~~~ 174 (542)
T COG1021 106 VLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEA----------EH-PSVLEAALC 174 (542)
T ss_pred hhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCC----------CC-cchhhhhhh
Confidence 999999999999999999999999988532 2222222 2 3444444221 11 111222222
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH-HH
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI-LY 255 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~-~~ 255 (436)
.... ...+....+++++++.+.+.||||.||.++.||..+..+..+..+.+.+... .++++.+|..|-+.+.+- .+
T Consensus 175 ~~a~-~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~--tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 175 HPAG-LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQ--TVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred Cccc-cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCcc--ceEEEecccccCCCCCCcchh
Confidence 2111 2223455678889999999999999999999999999999988888888555 999999999998877643 88
Q ss_pred hhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCC
Q 013780 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (436)
Q Consensus 256 ~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~ 335 (436)
..+++|+++++.+..+|...+.+|+++++|+...+|.+...++........+++|||.+-+||+.+++++.+++...++
T Consensus 252 Gv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~lg- 330 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVLG- 330 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhhC-
Confidence 9999999999999999999999999999999999999999999999989999999999999999999999999999998
Q ss_pred CeeeeccccccccCCcccccCCCC-CccCcCcccccc-CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChh
Q 013780 336 ATIFQVGYGMTETCAPISLENPLV-GVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFV 413 (436)
Q Consensus 336 ~~i~~~~YG~tE~~~~~~~~~~~~-~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~ 413 (436)
+.+-+ ++||.|.- +.++..++ .+....+.|+|+ |.-|++|+| ++|+++++||+|+|..+||....| ||+.|+
T Consensus 331 C~LQQ-VFGMAEGL--vnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirG--Yyrap~ 404 (542)
T COG1021 331 CQLQQ-VFGMAEGL--VNYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRG--YYRAPE 404 (542)
T ss_pred chHHH-Hhhhhhhh--hcccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeee--eccCch
Confidence 99999 99999943 33333322 244567899999 788999999 699999999999999999999999 999999
Q ss_pred hhhhhccccccCCeeecCCCCC
Q 013780 414 FTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 414 ~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
-+.+.|. .+|+|+|||+.+
T Consensus 405 HNa~aF~---a~GFYrsGD~V~ 423 (542)
T COG1021 405 HNARAFD---ADGFYRSGDLVR 423 (542)
T ss_pred hhhhccC---cCCceecCceeE
Confidence 9999984 789999999753
No 38
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-51 Score=419.34 Aligned_cols=404 Identities=22% Similarity=0.302 Sum_probs=312.5
Q ss_pred CcCCCCCCCchHH-HHhhhcccCCCceEEEeCCC----CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHH
Q 013780 19 LVLPSDPSFSMVH-FLFRNSASYSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP 93 (436)
Q Consensus 19 ~~~~~~~~~ti~~-~l~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~ 93 (436)
.++++ +..|+.. .|.++++++|+++|+++... ...+||+||.+++.++|+.|++.|+++||+|+++++|+++++
T Consensus 59 ~w~~~-~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~ 137 (637)
T PRK00174 59 KWFED-GELNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAA 137 (637)
T ss_pred ccCCC-CEeEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Confidence 44443 2355544 56677888999999986532 358999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH---------HHh----hcC-CCcEEeccCCccccc
Q 013780 94 ICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KVK----DLN-LPAVLLGSKDKVSSS 159 (436)
Q Consensus 94 ~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~----~~~-~~~~~~~~~~~~~~~ 159 (436)
+++|||+++|+++++++|.++.+++.+++++++++++|+++.... .+. ... .+.+++..... ...
T Consensus 138 ~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 216 (637)
T PRK00174 138 VAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTG-GDV 216 (637)
T ss_pred HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCC-CCc
Confidence 999999999999999999999999999999999999999865321 111 111 12222221100 000
Q ss_pred cccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHH-hhhhccCCCCcEE
Q 013780 160 GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVV 238 (436)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~ 238 (436)
. ........++++..... .........++++++|+|||||||.||+|+++|++++.++.... ....+ ...|++
T Consensus 217 ~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~--~~~d~~ 290 (637)
T PRK00174 217 D--WVEGRDLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDY--KDGDVY 290 (637)
T ss_pred C--cCCCCcccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCC--CCCcEE
Confidence 0 00111233555554322 22233445678999999999999999999999999876543221 22223 223999
Q ss_pred EechhHHHHHHHHHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcce
Q 013780 239 LCVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLK 312 (436)
Q Consensus 239 ~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr 312 (436)
++..|++|+.+....++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+.... ...++++||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr 370 (637)
T PRK00174 291 WCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLR 370 (637)
T ss_pred EEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCcccee
Confidence 9999999999987678999999999998742 4799999999999999999999999999886542 335678999
Q ss_pred EEEecCCCCcHHHHHHHHhhCCC--CeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCC
Q 013780 313 LVGSGAAPLGKELMEDCQKNIPG--ATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPN 390 (436)
Q Consensus 313 ~i~~gg~~l~~~~~~~~~~~~~~--~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g 390 (436)
.+++||+++++++.+++.+.++. +++++ .||+||+++.++...+.....+++++|+|++|++++|+| ++|++++.|
T Consensus 371 ~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g 448 (637)
T PRK00174 371 LLGSVGEPINPEAWEWYYKVVGGERCPIVD-TWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGG 448 (637)
T ss_pred EEEEeCCCCCHHHHHHHHHHhCCCCCceEe-cccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCC
Confidence 99999999999999999998863 78999 999999988665443322244678999999999999999 589999999
Q ss_pred CceEEEEec--CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 391 QLGEIWVRG--PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 391 ~~Gel~v~g--~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.|||+++| |+++.| ||++++.+.+.+ +-..+|||+|||+|+
T Consensus 449 ~~Gel~v~g~~p~~~~g--y~~~~~~~~~~~-~~~~~g~~~TGDl~~ 492 (637)
T PRK00174 449 EGGNLVIKDPWPGMMRT--IYGDHERFVKTY-FSTFKGMYFTGDGAR 492 (637)
T ss_pred CcEEEEEcCCCCccccc--ccCCHHHHHHhh-hcCCCCEEECCceEE
Confidence 999999999 689999 999999877654 112367999999864
No 39
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-52 Score=411.58 Aligned_cols=374 Identities=25% Similarity=0.351 Sum_probs=314.5
Q ss_pred chHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.+.+.|.++++.+|+++|+++. ++.+||.||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 4889999999999999999986 7999999999999999999975 799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCC---cEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
+|+++..+.+++..+++.++++++++++.....+...... ..++.. .++.+...... .
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~--~- 141 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISI----------------TSLKEIEDRKI--D- 141 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEe----------------cchHhhhccCC--C-
Confidence 9999999999999999999999999998776555443211 011110 11222222111 1
Q ss_pred CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
......++++++++|||||||.||+|.++|.++..++......... ..++++++.+|++|.+|+....+.++..|++
T Consensus 142 -~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~ 218 (496)
T PRK06839 142 -NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDL--TMHDRSIVLLPLFHIGGIGLFAFPTLFAGGV 218 (496)
T ss_pred -CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCC--CCCCeEEEeeCCcchhhHHHHHHHHHhcCcE
Confidence 1223456889999999999999999999999987765544333333 2338999999999999998777899999999
Q ss_pred EEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 264 v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
+++++.+++..+++.++++++|++.++|++++.+.+.......+++++|.+++||+++++++.+.+++. ++++.+ .|
T Consensus 219 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~-~Y 295 (496)
T PRK06839 219 IIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQ-GF 295 (496)
T ss_pred EEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEe-ec
Confidence 999999999999999999999999999999999998876666778999999999999999999999987 499999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccc
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 423 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~ 423 (436)
|+||++..++...........+++|+|+++++++|+|+ ++..++.|+.|||+++|+.++.| |+++|+.+...+
T Consensus 296 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~---- 368 (496)
T PRK06839 296 GMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVMKE--YWNRPDATEETI---- 368 (496)
T ss_pred cCCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcchh--hcCChHHHHHHH----
Confidence 99999876554433322456789999999999999996 66779999999999999999999 999999998877
Q ss_pred cCCeeecCCCCC
Q 013780 424 TDSFIRGKDQQT 435 (436)
Q Consensus 424 ~~~~~~tgD~~~ 435 (436)
.++||+|||+++
T Consensus 369 ~~g~~~TGDl~~ 380 (496)
T PRK06839 369 QDGWLCTGDLAR 380 (496)
T ss_pred cCCCeeecceEE
Confidence 578999999763
No 40
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-51 Score=412.72 Aligned_cols=385 Identities=25% Similarity=0.354 Sum_probs=321.6
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.+.|.+.++++|+++|+.+. ++.+||.||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 88999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHHhhhcCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (436)
+|+++..+.+++..+++.++++++++++.....+.... .+.++...+ .......++.+++....
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-- 163 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGG---------SSDDSVLGYEDLLAEAG-- 163 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecC---------CCcccccCHHHHhhccC--
Confidence 99999999999999999999999999987665544332 122222111 11223345666554433
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCC
Q 013780 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (436)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 261 (436)
..........+++++++|||||||.||+|.++|+++..++........+ ....+++++..|++|.+|+. .++.++..|
T Consensus 164 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~-~~~~~l~~G 241 (542)
T PRK07786 164 PAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGA-DINSDVGFVGVPLFHIAGIG-SMLPGLLLG 241 (542)
T ss_pred CCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCC-CCCCceEEEecchHHHHHHH-HHHHHHHcc
Confidence 2223334556789999999999999999999999998877665444433 12348999999999999985 788999999
Q ss_pred cEEEEcC--CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013780 262 NCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (436)
Q Consensus 262 ~~v~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~ 339 (436)
+++++.+ .+++..+++.++++++|+++++|+++..|.......... .++|.+++||+++++++++++++.|++.+++
T Consensus 242 ~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~ 320 (542)
T PRK07786 242 APTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQIL 320 (542)
T ss_pred CEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEE
Confidence 9999864 679999999999999999999999999998876544333 3799999999999999999999999889999
Q ss_pred eccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhc
Q 013780 340 QVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW 419 (436)
Q Consensus 340 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~ 419 (436)
+ .||+||++++.+............++|+|++++.++|+| +++..++.|+.|||+++|+.++.| |+++++.+...|
T Consensus 321 ~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~f 396 (542)
T PRK07786 321 A-AFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSG--YWNNPEATAEAF 396 (542)
T ss_pred e-eecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhh--hcCCHHHHHHHh
Confidence 9 999999987655443332235668999999999999999 488999999999999999999999 999999999888
Q ss_pred cccccCCeeecCCCCC
Q 013780 420 GCEHTDSFIRGKDQQT 435 (436)
Q Consensus 420 ~~~~~~~~~~tgD~~~ 435 (436)
.++||+|||+++
T Consensus 397 ----~~~~~~TGDl~~ 408 (542)
T PRK07786 397 ----AGGWFHSGDLVR 408 (542)
T ss_pred ----hCCcccccceEE
Confidence 478999999763
No 41
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-51 Score=405.94 Aligned_cols=368 Identities=28% Similarity=0.360 Sum_probs=310.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.++|.+++.++|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+++++..+.+++..++++++++.+++++.....+..... ..++++...... .....
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~-~~~~~ 135 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-----------------------VKFAELMNGPKE-EAEIQ 135 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-----------------------ccHHHHhhcccc-cCCCC
Confidence 999999999999999999999999998765544322110 012222222111 11222
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++++|||||||.||+|.++|.++...+........+. ..+++++.+|++|++++. .++.++..|+++++
T Consensus 136 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~ 212 (483)
T PRK03640 136 EEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLT--EDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVL 212 (483)
T ss_pred CCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCC--cCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEe
Confidence 345678999999999999999999999999988765554444443 339999999999999986 67888999999999
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMT 346 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~t 346 (436)
.+.+++..+++.++++++|++.++|+++..|.+..... ....+||.+++||+++++++++.+++. ++++++ .||+|
T Consensus 213 ~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~-~YG~t 288 (483)
T PRK03640 213 VEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQ-SYGMT 288 (483)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeee-eeccC
Confidence 99999999999999999999999999999998764433 234689999999999999999999875 599999 99999
Q ss_pred ccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCC
Q 013780 347 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS 426 (436)
Q Consensus 347 E~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~ 426 (436)
|++..++.........+.+++|+|+++++++|.|+ +.+++.|+.|||+++|+.++.| |+++++.+.+.| .++
T Consensus 289 E~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~~----~~~ 360 (483)
T PRK03640 289 ETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKG--YLNREDATRETF----QDG 360 (483)
T ss_pred cccccccccCcccccccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhh--hcCCHHHHHHHH----hcC
Confidence 98765554444333456789999999999999984 3789999999999999999999 999999999888 578
Q ss_pred eeecCCCCC
Q 013780 427 FIRGKDQQT 435 (436)
Q Consensus 427 ~~~tgD~~~ 435 (436)
||+|||+++
T Consensus 361 ~~~tGDl~~ 369 (483)
T PRK03640 361 WFKTGDIGY 369 (483)
T ss_pred CeeccceEE
Confidence 999999763
No 42
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-51 Score=406.86 Aligned_cols=381 Identities=25% Similarity=0.326 Sum_probs=316.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.+.|.++++++|+++|+++. ++.+||.||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 57899999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|+++..+.+++.++++.+++++++++++........ .....+... .. ..+..+..... .....
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~----------~~---~~~~~~~~~~~--~~~~~ 143 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVALE-TPKIVIDAA----------AQ---ADSRRLAQGGL--EIPPQ 143 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhhcc-cceEEecCc----------cc---chhHHHhccCC--CCCCC
Confidence 9999999999999999999999999987665432211 111111100 00 00111111100 11112
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++++|||||||.||+|+++|.++...+........+. .+++++...|++|.+++....+.++..|+++++
T Consensus 144 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~ 221 (497)
T PRK06145 144 AAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLT--ASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRI 221 (497)
T ss_pred CCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCC--CCcEEEEecCchhHhHHHHHHHHHHhccCEEEE
Confidence 334678999999999999999999999999987655443333332 338999999999999997667888999999999
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMT 346 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~t 346 (436)
.+.+++..+++.++++++|++.++|+++..+++.......+++++|.+++||+++++++.+++.+.|++.++++ .||+|
T Consensus 222 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~-~YG~t 300 (497)
T PRK06145 222 HREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYID-AYGLT 300 (497)
T ss_pred CCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEE-eecCc
Confidence 99999999999999999999999999999998876655667889999999999999999999999998899999 99999
Q ss_pred ccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCC
Q 013780 347 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS 426 (436)
Q Consensus 347 E~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~ 426 (436)
|+++..+.........+.+++|+|+++++++++|+ ++..++.|+.|||+++|++++.| |+++++.+.+.| .++
T Consensus 301 E~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~~Gel~v~g~~~~~G--y~~~~~~~~~~~----~~~ 373 (497)
T PRK06145 301 ETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADG-AGRWLPPNMKGEICMRGPKVTKG--YWKDPEKTAEAF----YGD 373 (497)
T ss_pred ccCCcceeccCccccccCCCcccCCCCceEEEECC-CCCCCCCCCceEEEEECcchhhh--hcCChHHHHHHH----hCC
Confidence 99876554433222345678999999999999995 78999999999999999999999 999999999888 478
Q ss_pred eeecCCCCC
Q 013780 427 FIRGKDQQT 435 (436)
Q Consensus 427 ~~~tgD~~~ 435 (436)
||+|||+++
T Consensus 374 ~~~TGDl~~ 382 (497)
T PRK06145 374 WFRSGDVGY 382 (497)
T ss_pred CeeccceEE
Confidence 999999863
No 43
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=6e-51 Score=409.28 Aligned_cols=387 Identities=24% Similarity=0.332 Sum_probs=316.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.++|.+.++++|+++|+++. +++.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 101 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDN-HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVS 101 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 67999999999999999999875 35799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccch-----HHHHhh----cC-CCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPEL-----WDKVKD----LN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~-----~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
+|++|.++.+++.++++.++++++++++.. ...+.. .. .+.++.... . ........+.++..
T Consensus 102 v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~ 173 (547)
T PRK06087 102 VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDK-L-------APATSSLSLSQIIA 173 (547)
T ss_pred eccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCC-c-------CCCcCccCHHHHhc
Confidence 999999999999999999999999997532 122211 11 112222211 0 01111224444443
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHh
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 256 (436)
... ..........+++++|+|||||||.||+|+++|+++......+.....+. ..+++++.+|++|.+++...++.
T Consensus 174 ~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~g~~~~~~~ 249 (547)
T PRK06087 174 DYE--PLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLT--WQDVFMMPAPLGHATGFLHGVTA 249 (547)
T ss_pred cCC--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCC--CCCeEEEecchHHHHHHHHHHHH
Confidence 322 11122334678999999999999999999999999988776655544443 33999999999999998878899
Q ss_pred hccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCC
Q 013780 257 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (436)
Q Consensus 257 ~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~ 336 (436)
++..|+++++.+.+++..+++.++++++|+++++|..+..+++.......+++++|.+++||+++++++.+.+.+. ++
T Consensus 250 ~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~ 327 (547)
T PRK06087 250 PFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GI 327 (547)
T ss_pred HHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CC
Confidence 9999999999999999999999999999999998888877777655555678899999999999999999998875 59
Q ss_pred eeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhh
Q 013780 337 TIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTL 416 (436)
Q Consensus 337 ~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~ 416 (436)
++++ .||+||++++..............++|+|+++++++++| +++.+++.|+.|||+++|+.++.| |+++++.+.
T Consensus 328 ~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~ 403 (547)
T PRK06087 328 KLLS-VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMG--YLDEPELTA 403 (547)
T ss_pred cEEE-EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEeccccccc--ccCCHHHHH
Confidence 9999 999999987766543322123456889999999999999 588999999999999999999999 999999988
Q ss_pred hhccccccCCeeecCCCCC
Q 013780 417 FLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 417 ~~~~~~~~~~~~~tgD~~~ 435 (436)
..+ ..++||+|||+++
T Consensus 404 ~~~---~~~g~~~TGDl~~ 419 (547)
T PRK06087 404 RAL---DEEGWYYSGDLCR 419 (547)
T ss_pred HHh---CCCCCcCcCceEE
Confidence 776 3578999999763
No 44
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=4.4e-51 Score=411.58 Aligned_cols=392 Identities=26% Similarity=0.367 Sum_probs=321.5
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.||.+.|.+.++++|+++|+++.+.+..+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 16 ~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 95 (559)
T PRK08315 16 QTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAIL 95 (559)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEE
Confidence 68999999999999999999987667899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchH-----HHHhhcCCC-----------------cEEeccCCcccccccccc
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLNLP-----------------AVLLGSKDKVSSSGLISR 164 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 164 (436)
+|++|..+.+++..+++.++++++++++... +.+...... ..++..+. ..
T Consensus 96 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 167 (559)
T PRK08315 96 VTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD--------EK 167 (559)
T ss_pred EecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc--------cC
Confidence 9999999999999999999999999986432 112111100 00111010 01
Q ss_pred CcccchhhHHhhhcCCC----CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEe
Q 013780 165 SSKIVSFHDLIELSGSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLC 240 (436)
Q Consensus 165 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (436)
..+...+.++....... ..........+++++++|||||||.||+|.++|+++..++........+... ++++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~--d~~~~ 245 (559)
T PRK08315 168 HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEE--DRLCI 245 (559)
T ss_pred CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCC--ceEEE
Confidence 12223444443322100 0111223457889999999999999999999999998887776655555333 89999
Q ss_pred chhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCC
Q 013780 241 VLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAA 319 (436)
Q Consensus 241 ~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~ 319 (436)
.+|++|.+++...++.++..|+++++. ..+++..+++.++++++|+++++|+++..+..........+++||.+++||+
T Consensus 246 ~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~ 325 (559)
T PRK08315 246 PVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGS 325 (559)
T ss_pred ecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCC
Confidence 999999999987889999999999854 5789999999999999999999999999988876666667899999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCC-CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEe
Q 013780 320 PLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 398 (436)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 398 (436)
+++.++.+++.+.++..++++ .||+||++.+++...... ...+..++|+|+++++++|+|++++++++.|+.|||+++
T Consensus 326 ~~~~~~~~~~~~~~~~~~l~~-~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~ 404 (559)
T PRK08315 326 PCPIEVMKRVIDKMHMSEVTI-AYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTR 404 (559)
T ss_pred CCCHHHHHHHHHHcCCcceeE-EEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEE
Confidence 999999999999998667999 999999987655443221 134578999999999999999877999999999999999
Q ss_pred cCCcccCccccCChhhhhhhccccccCCeeecCCCC
Q 013780 399 GPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 399 g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
|++++.| ||++|+.+...+ ..++||+|||+|
T Consensus 405 g~~~~~g--y~~~~~~~~~~~---~~~~~~~TGD~~ 435 (559)
T PRK08315 405 GYSVMKG--YWNDPEKTAEAI---DADGWMHTGDLA 435 (559)
T ss_pred Cchhhhh--hcCChhHHhhcC---CCCCCEEccceE
Confidence 9999999 999999988766 257899999976
No 45
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-51 Score=409.01 Aligned_cols=377 Identities=20% Similarity=0.234 Sum_probs=307.3
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 120 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADI 120 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEE
Confidence 68999999999999999999986 6799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCccccccccccCcccchhhHHhhhcCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (436)
+|+++.++.+++.++++.++++++|++......+.... ....++.... ......++++..... .
T Consensus 121 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~ 188 (537)
T PRK13382 121 LLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTD----------EDHDLTVEVLIAAHA--G 188 (537)
T ss_pred EecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecC----------CcccccHHHHhhccC--c
Confidence 99999999999999999999999999987655443321 0111111110 001123333333221 1
Q ss_pred CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
. .....+++.++++|||||||.||+|+++|.++..+.........+.. .++++...|++|.+++. .++.++..|+
T Consensus 189 ~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~~~~l~~~p~~~~~g~~-~~~~~l~~g~ 263 (537)
T PRK13382 189 Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRA--EEPTVIVAPMFHAWGFS-QLVLAASLAC 263 (537)
T ss_pred C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCC--CCeEEEecChHhhhHHH-HHHHHHhcCc
Confidence 1 11224678899999999999999999999988877665544443333 38899999999999985 7888899999
Q ss_pred EEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 263 ~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
++++...+++..+++.|+++++|++.++|+++..|.+.... ...+++++|.+++||+++++++.++|.+.++ ..+++
T Consensus 264 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~ 342 (537)
T PRK13382 264 TIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIYN 342 (537)
T ss_pred EEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe
Confidence 99999999999999999999999999999999999876532 2335678999999999999999999999998 78999
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 420 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~ 420 (436)
.||+||++.+++..... ....++++|+|+++++++|+|+ ++++++.|+.|||+++|+.++.| |+ ++.+...
T Consensus 343 -~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~GEl~v~g~~~~~g--Y~--~~~~~~~-- 413 (537)
T PRK13382 343 -NYNATEAGMIATATPAD-LRAAPDTAGRPAEGTEIRILDQ-DFREVPTGEVGTIFVRNDTQFDG--YT--SGSTKDF-- 413 (537)
T ss_pred -cccccccCcceecChhH-hccCCCCccccCcCcEEEEECC-CCCCCCCCCeeEEEEEcCCcccC--cc--ccchhhc--
Confidence 99999998766543322 1346789999999999999995 88999999999999999999999 98 4554432
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
.++||+|||+++
T Consensus 414 ---~~g~~~TGDl~~ 425 (537)
T PRK13382 414 ---HDGFMASGDVGY 425 (537)
T ss_pred ---cCCCEeeCceEE
Confidence 267999999763
No 46
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=7.1e-51 Score=406.81 Aligned_cols=383 Identities=21% Similarity=0.267 Sum_probs=312.6
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 67999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchH--------HHHhhcC--CCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELW--------DKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
+++++..+.+++.++++.++++++++++... +.+.... ....++..+. .....+.....
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 169 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQT-----------RVEAELFLWLE 169 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCC-----------CCcchhhHHhh
Confidence 9999999999999999999999999986531 1111111 1111111110 00001111111
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHH-HHH
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 255 (436)
... .........++++++++|||||||.||+|+++|.++..+.........+.. ++++++.+|++|.+++.. .++
T Consensus 170 ~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 170 SPA--EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQ--QTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred CcC--ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCc--CCEEEECCChHhhhhhhHHHHH
Confidence 111 112223456789999999999999999999999999888776555544433 399999999999999864 478
Q ss_pred hhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCC
Q 013780 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (436)
Q Consensus 256 ~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~ 335 (436)
.++..|+++++.+++++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++++.+++.+.++
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g- 324 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG- 324 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHhC-
Confidence 8899999999998889999999999999999999999999998877666677889999999999999999999999997
Q ss_pred CeeeeccccccccCCcccccCCCCCccCcCcccccc-CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhh
Q 013780 336 ATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVF 414 (436)
Q Consensus 336 ~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~ 414 (436)
.++++ .||+||++..... .........+++|+|+ ++.+++|+| ++++++++|+.|||+++|+.++.| ||++++.
T Consensus 325 ~~~~~-~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~g--Y~~~~~~ 399 (527)
T TIGR02275 325 CQLQQ-VFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRG--YYKAPEH 399 (527)
T ss_pred CeEEe-eeccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchh--hcCChhH
Confidence 99999 9999996543322 1111134567899999 588999999 488999999999999999999999 9999999
Q ss_pred hhhhccccccCCeeecCCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+...+ +.++||+|||+|+
T Consensus 400 ~~~~~---~~dg~~~TGDl~~ 417 (527)
T TIGR02275 400 NAAAF---DAEGFYYTGDLVR 417 (527)
T ss_pred hHhhc---CcCCCEEcCceEE
Confidence 88876 3578999999763
No 47
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-51 Score=424.74 Aligned_cols=367 Identities=22% Similarity=0.302 Sum_probs=301.3
Q ss_pred CchHHHHhhhccc--CCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 27 FSMVHFLFRNSAS--YSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 27 ~ti~~~l~~~~~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
.|+.++|.++++. +|+++|+++. ..+||+||.++++++|+.|.+.|+++|++|+|+++|+++++++++||+++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~ 80 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGV 80 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 4689999988876 7999999864 4799999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCC
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (436)
+++|++|.++.+++.+++++++++++|++....+.+.... ++ ...+++.........
T Consensus 81 ~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~-------------------~~~~~~~~~~~~~~~ 137 (705)
T PRK06060 81 MAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR----VA-------------------EAAELMSEAARVAPG 137 (705)
T ss_pred EEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc----cc-------------------hhhhhhhhccccCCC
Confidence 9999999999999999999999999999876544332110 00 011111110000011
Q ss_pred CCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHH-hhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMIS-AHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
......++++++++|||||||.||+|+++|+++..+...+. ..+.+. ..+++++..|++|.+++...++.++..|++
T Consensus 138 ~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 138 GYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLT--PEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCC--CcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 11233568899999999999999999999999988765443 223332 238999999999999886678889999999
Q ss_pred EEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 264 VVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 264 v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
+++.+ .+++..++..++++++|+++++|+++..+.+... ...+++||.+++||+++++++.+++.+.|++.++++ .
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~ 292 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILD-G 292 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEe-e
Confidence 99986 5788999999999999999999999999987543 235789999999999999999999999998799999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcccc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 422 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~ 422 (436)
||+||++..+...... ..+.+++|+|+++++++|+|+ +++++++|+.|||+++|++++.| ||++|+.+.
T Consensus 293 YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~-~g~~~~~g~~GEl~i~g~~v~~G--Y~~~~~~~~------ 361 (705)
T PRK06060 293 IGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVAP-DGTTAGPGVEGDLWVRGPAIAKG--YWNRPDSPV------ 361 (705)
T ss_pred eeccccCceEEeccCC--CCCcCcccccCCCcEEEEECC-CCCCCCCCCceEEEEccchhhhh--hhCCCcccc------
Confidence 9999997655433222 345778999999999999995 78999999999999999999999 999998643
Q ss_pred ccCCeeecCCCCC
Q 013780 423 HTDSFIRGKDQQT 435 (436)
Q Consensus 423 ~~~~~~~tgD~~~ 435 (436)
..++||+|||+|+
T Consensus 362 ~~~~~~~TGDl~~ 374 (705)
T PRK06060 362 ANEGWLDTRDRVC 374 (705)
T ss_pred cCCCcEECCeeEE
Confidence 2478999999874
No 48
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.8e-51 Score=443.11 Aligned_cols=395 Identities=25% Similarity=0.345 Sum_probs=321.1
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.+.+.++++|+++|+++. .++.+||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+++
T Consensus 615 ~~l~~~~~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~ 692 (1146)
T PRK08633 615 PPLAEAWIDTAKRNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVP 692 (1146)
T ss_pred CCHHHHHHHHHHhcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEE
Confidence 78999999999999999999875 35799999999999999999987 58999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhc------CCCcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL------NLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
+|++|..+.+++.+++++++++++++++...+.+... .....++..++.. ........+.+.......
T Consensus 693 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 693 VNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLK------AKISKVDKLTALLAARLL 766 (1146)
T ss_pred EEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhc------cccchhHHHHHHHHhccC
Confidence 9999999999999999999999999998777666431 1111111111100 000011112222111100
Q ss_pred CC----CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHh
Q 013780 181 VT----DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (436)
Q Consensus 181 ~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 256 (436)
.. ........++++++++|||||||.||+|.+||+++..++........... +|++++.+|++|.+++...++.
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~p~~h~~g~~~~~~~ 844 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRN--DDVILSSLPFFHSFGLTVTLWL 844 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCC--CCEEEEcCcHHHHHhHHHHHHH
Confidence 00 00013456789999999999999999999999999988776655554433 3999999999999999866889
Q ss_pred hccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCC
Q 013780 257 QLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPG 335 (436)
Q Consensus 257 ~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~ 335 (436)
++..|+++++.+ ++++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++||+++++++.+++++.++
T Consensus 845 ~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g- 923 (1146)
T PRK08633 845 PLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKFG- 923 (1146)
T ss_pred HHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHhC-
Confidence 999999998875 579999999999999999999999999998876666667899999999999999999999999997
Q ss_pred CeeeeccccccccCCcccccCCCC--------CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCcc
Q 013780 336 ATIFQVGYGMTETCAPISLENPLV--------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIV 407 (436)
Q Consensus 336 ~~i~~~~YG~tE~~~~~~~~~~~~--------~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~ 407 (436)
.++++ .||+||++++++...++. ...+++++|+|+|+++++|+|+++++++++|+.|||+++|++++.|
T Consensus 924 ~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g-- 1000 (1146)
T PRK08633 924 IRILE-GYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKG-- 1000 (1146)
T ss_pred CCeec-ccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCcccc--
Confidence 99999 999999987766543221 1235789999999999999998889999999999999999999999
Q ss_pred ccCChhhhhhhccccccCCeeecCCCCC
Q 013780 408 YINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 408 Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+++|+.+.+.+.-.+.++||+|||+|+
T Consensus 1001 Y~~~~~~t~~~~~~~~~~~~~~TGD~~~ 1028 (1146)
T PRK08633 1001 YLGDPEKTAEVIKDIDGIGWYVTGDKGH 1028 (1146)
T ss_pred ccCCccchHHHhhcCCCCCeEECCCEEE
Confidence 9999999998873222348999999864
No 49
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.3e-50 Score=403.20 Aligned_cols=382 Identities=26% Similarity=0.351 Sum_probs=317.8
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
+.+|.+.|.+++ .+|+++|+.+. ++..+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~ 79 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAV 79 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 367999999999 99999999874 3689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCC---cEEeccCCccccccccccCcccchhhHHhhhcCCCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP---AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (436)
++|+++.++.+++..+++.++++++++++...+.+...... ..++..+. .....+.+...... .
T Consensus 80 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~--~ 146 (504)
T PRK07514 80 FLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDA-----------DGTGSLLEAAAAAP--D 146 (504)
T ss_pred EEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecC-----------CCcccHHHhhhhcC--c
Confidence 99999999999999999999999999998776655443211 10111110 00011222221111 2
Q ss_pred CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
........++++++|+|||||||.||+|.++|+++...+........+.. .+++++.+|++|..++...++.++..|+
T Consensus 147 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 224 (504)
T PRK07514 147 DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTP--DDVLIHALPIFHTHGLFVATNVALLAGA 224 (504)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCC--ccEEEEecchHHHHHHHHHHHHHHhcCc
Confidence 22234456789999999999999999999999999988776655554433 3899999999999999877889999999
Q ss_pred EEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 263 ~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
++++.+.+++..+++.+ .++|++.++|+++..+.+........++++|.+++||+++++++.++|++.++ .++++ .
T Consensus 225 ~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~-~ 300 (504)
T PRK07514 225 SMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTG-HAILE-R 300 (504)
T ss_pred EEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhC-Cccee-e
Confidence 99999989999999999 47999999999999998876666667889999999999999999999999987 89999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcccc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 422 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~ 422 (436)
||+||++......... .....++|.|+++++++|+|++++++++.|+.|||+++|+.++.| |+++++.+.+.|
T Consensus 301 YG~tE~~~~~~~~~~~--~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~g--y~~~~~~~~~~~--- 373 (504)
T PRK07514 301 YGMTETNMNTSNPYDG--ERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKG--YWRMPEKTAEEF--- 373 (504)
T ss_pred cccccccccccCCccc--cccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCcccc--ccCCchhhhhhc---
Confidence 9999987654432211 445678999999999999998899999999999999999999999 999999988777
Q ss_pred ccCCeeecCCCCC
Q 013780 423 HTDSFIRGKDQQT 435 (436)
Q Consensus 423 ~~~~~~~tgD~~~ 435 (436)
..++||+|||+++
T Consensus 374 ~~~~~~~TGDl~~ 386 (504)
T PRK07514 374 RADGFFITGDLGK 386 (504)
T ss_pred ccCCCeeecceEE
Confidence 2478999999863
No 50
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-50 Score=408.49 Aligned_cols=392 Identities=24% Similarity=0.341 Sum_probs=319.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.+.++++|+++|+++.+.++.+||.||.+++.++|+.|.+.|+++|++|+|+++|+++++++++||+++|+++
T Consensus 18 ~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 97 (558)
T PRK12583 18 QTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAIL 97 (558)
T ss_pred CcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEE
Confidence 67999999999999999999987667899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchH-----HHHhhcCCC-----------------cEEeccCCcccccccccc
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLNLP-----------------AVLLGSKDKVSSSGLISR 164 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 164 (436)
+++++.++.+++.++++.++++++|+++... ..+...... ..++..+. ..
T Consensus 98 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 169 (558)
T PRK12583 98 VNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAP--------AP 169 (558)
T ss_pred EecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecC--------CC
Confidence 9999999999999999999999999976431 111111000 00110010 01
Q ss_pred CcccchhhHHhhhcCCC----CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEe
Q 013780 165 SSKIVSFHDLIELSGSV----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLC 240 (436)
Q Consensus 165 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 240 (436)
......+++........ .........++++++++|||||||.||+|.++|.++..++........+.. ++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~--~d~~~~ 247 (558)
T PRK12583 170 PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE--HDRLCV 247 (558)
T ss_pred CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC--CCeEEE
Confidence 11223344333222110 011123345788999999999999999999999999888776655554433 389999
Q ss_pred chhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCC
Q 013780 241 VLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAA 319 (436)
Q Consensus 241 ~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~ 319 (436)
..|++|.+|....++.++..|++++++ ..+++..+++.++++++|+++++|+++..+.........+++++|.+++||+
T Consensus 248 ~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~ 327 (558)
T PRK12583 248 PVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGA 327 (558)
T ss_pred ecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCC
Confidence 999999999988899999999999976 4679999999999999999999999999888776656667899999999999
Q ss_pred CCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCC-CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEe
Q 013780 320 PLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLV-GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVR 398 (436)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~ 398 (436)
++++++.+++.+.++...+++ .||+||+++++....... ...+..++|+|++++.++|+|+ ++.+++.|+.|||+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~ 405 (558)
T PRK12583 328 PCPIEVMRRVMDEMHMAEVQI-AYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDP-DGATVPRGEIGELCTR 405 (558)
T ss_pred CCCHHHHHHHHHHcCCcceec-cccccccccceeccCcccccccccCCCCccCCCCeEEEECC-CCCCCCCCCeeEEEEE
Confidence 999999999999998678999 999999988766543221 1345789999999999999997 4899999999999999
Q ss_pred cCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 399 GPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 399 g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+.++.| |+++++.+.+.+ ..++||+|||+|+
T Consensus 406 g~~~~~g--y~~~~~~~~~~~---~~~~~~~TGDl~~ 437 (558)
T PRK12583 406 GYSVMKG--YWNNPEATAESI---DEDGWMHTGDLAT 437 (558)
T ss_pred eCccchh--hcCChHHHHhhc---CCCCCeeccceEE
Confidence 9999999 999999988765 2478999999863
No 51
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-50 Score=403.71 Aligned_cols=389 Identities=30% Similarity=0.421 Sum_probs=328.4
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
+.++.++|.+.++.+|+++|+.+. +..+||+||++++.++|+.|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 5 ~~~l~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~ 82 (521)
T PRK06187 5 PLTIGRILRHGARKHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAV 82 (521)
T ss_pred cCCHHHHHHHHHHHCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 378999999999999999999988 667999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
++++++.++.+++..+++.+++++++++....+.+.... .+.+++..+.... ........+.+++....
T Consensus 83 ~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~- 156 (521)
T PRK06187 83 LHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA-----PLAPEVGEYEELLAAAS- 156 (521)
T ss_pred EEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc-----ccccccccHHHHhhcCC-
Confidence 999999999999999999999999999988766655432 1223322221100 12234455666655443
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
..........+++++++|||||||.||+|.++|.++............+.. .+++++.+|++|.+++. ..+.++..
T Consensus 157 -~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~-~~~~~l~~ 232 (521)
T PRK06187 157 -DTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSR--DDVYLVIVPMFHVHAWG-LPYLALMA 232 (521)
T ss_pred -ccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCC--CCEEEEeCCchHHhhHH-HHHHHHHh
Confidence 233344556788999999999999999999999999887766555444433 39999999999999986 44559999
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 261 G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
|+++++.+.+++..+++.++++++|+++++|+++..|.+.......+++++|.+++||+++++++.+++.+.++ +++++
T Consensus 233 G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~-~~v~~ 311 (521)
T PRK06187 233 GAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFG-IDLVQ 311 (521)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhC-cchhe
Confidence 99999998889999999999999999999999999999988776778899999999999999999999999995 99999
Q ss_pred ccccccccCCcccccCCCCC----ccCcCccccccCCcEEEEEeCCCCccCCC--CCceEEEEecCCcccCccccCChhh
Q 013780 341 VGYGMTETCAPISLENPLVG----VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRGPNVTPGIVYINFFVF 414 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~----~~~~~~~G~p~~~~~v~i~d~~~~~~~~~--g~~Gel~v~g~~~~~g~~Y~~~~~~ 414 (436)
.||+||+++++........ .....++|+|+++++++|+|+ ++.+++. |+.|||+++|+.++.| |+++++.
T Consensus 312 -~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~--y~~~~~~ 387 (521)
T PRK06187 312 -GYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-DGDELPPDGGEVGEIIVRGPWLMQG--YWNRPEA 387 (521)
T ss_pred -eeccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-CCCCCCCCCCCeeEEEEECcchhhh--hcCCHHH
Confidence 9999999877666543321 126789999999999999995 7888888 9999999999999999 9999999
Q ss_pred hhhhccccccCCeeecCCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.+.| .++||+|||+++
T Consensus 388 ~~~~~----~~~~~~tGD~~~ 404 (521)
T PRK06187 388 TAETI----DGGWLHTGDVGY 404 (521)
T ss_pred HHHHh----hCCceeccceEE
Confidence 99888 467999999764
No 52
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-51 Score=417.12 Aligned_cols=383 Identities=23% Similarity=0.305 Sum_probs=299.7
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCC-----C--CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHH
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDAD-----S--DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~-----~--~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~l 97 (436)
++.|+.+.|.+.++.+|+++|+++.+ . ...+||+||.++++++|+.|.+. +++||+|+|+++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 33789999999999999999998642 1 25799999999999999999886 8999999999999999999999
Q ss_pred HHHHhCCeEeec-CCCCC--HHHHHHHHHhcCCcEEEEccchHHHHhhcCC------CcEEeccCCccccccccccCccc
Q 013780 98 GVIAIGAIASTA-NPVYT--VSELSKQVKDSNPKLVITVPELWDKVKDLNL------PAVLLGSKDKVSSSGLISRSSKI 168 (436)
Q Consensus 98 A~~~~G~~~v~l-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 168 (436)
||+++|++++|+ ++..+ .+++.++++.++++++|+++...+.+..... ...++..+.
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 163 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA-------------- 163 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc--------------
Confidence 999999999999 55554 6789999999999999999876554433210 001111110
Q ss_pred chhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHH
Q 013780 169 VSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVF 248 (436)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 248 (436)
+.+.. . .........++++++|+|||||||.||+|++||+++..++........+. .++++++.+|++|.+
T Consensus 164 --~~~~~---~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~--~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 164 --VPDEV---G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQ--EGDRGVSWLPFFHDM 234 (631)
T ss_pred --ccccc---c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCC--CcceEEEeCCCcCch
Confidence 00000 0 01111234578999999999999999999999999998776655544443 338999999999999
Q ss_pred HHHHHHHhhccCCcEEEEcCC--C--CHHHHHHHHHHhcc---eEEEecHHHHHHHHhc---ccc--CccCCCcceEEEe
Q 013780 249 GLSVILYDQLQKGNCVVSMGK--F--DIEMALRAIEKYRV---TVWWVVPPIILALAKN---SLV--RKFDISSLKLVGS 316 (436)
Q Consensus 249 g~~~~~~~~l~~G~~v~~~~~--~--~~~~~~~~l~~~~~---t~l~~~p~~~~~l~~~---~~~--~~~~l~~lr~i~~ 316 (436)
|+. .++.++..|+++++.++ + ++..+++.++++++ +.+.++|.++..+... ... ...++++||.+++
T Consensus 235 gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~ 313 (631)
T PRK07769 235 GLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLN 313 (631)
T ss_pred hhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEe
Confidence 997 45666778988888753 4 89999999999886 7899999988776653 111 1357889999999
Q ss_pred cCCCCcHHHHHHHHhhCC-----CCeeeeccccccccCCcccccCCCCC-------------------------ccCcCc
Q 013780 317 GAAPLGKELMEDCQKNIP-----GATIFQVGYGMTETCAPISLENPLVG-------------------------VRRSGS 366 (436)
Q Consensus 317 gg~~l~~~~~~~~~~~~~-----~~~i~~~~YG~tE~~~~~~~~~~~~~-------------------------~~~~~~ 366 (436)
||+++++++.++|.+.|+ ...+++ .||+||++.+++..+.... .....+
T Consensus 314 gg~~l~~~~~~~~~~~~~~~g~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s 392 (631)
T PRK07769 314 GSEPVSPASMRKFNEAFAPYGLPPTAIKP-SYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVS 392 (631)
T ss_pred ccCCCCHHHHHHHHHHHhhcCCChhhccc-ccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEe
Confidence 999999999999999873 235888 9999998776554332210 011357
Q ss_pred cccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc--------------cccCCeeecCC
Q 013780 367 AGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC--------------EHTDSFIRGKD 432 (436)
Q Consensus 367 ~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~--------------~~~~~~~~tgD 432 (436)
+|+|+++.+++|+|++++++++.|+.|||+++|++++.| ||++++.+.+.|.- -..++||+|||
T Consensus 393 ~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~G--Y~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGD 470 (631)
T PRK07769 393 AGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTG--YWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGD 470 (631)
T ss_pred CCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCcccc--ccCChhHHHHHHhhhcccccccccccCcccCCCeeeccc
Confidence 999999999999998789999999999999999999999 99999999988721 12358999999
Q ss_pred CCC
Q 013780 433 QQT 435 (436)
Q Consensus 433 ~~~ 435 (436)
+|+
T Consensus 471 lg~ 473 (631)
T PRK07769 471 YGV 473 (631)
T ss_pred ccc
Confidence 985
No 53
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.4e-50 Score=403.93 Aligned_cols=385 Identities=22% Similarity=0.272 Sum_probs=312.5
Q ss_pred CchHHHHhhhcccCCCceEEEeCC----CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~ 102 (436)
.|+.+.+.+.++.+|+++|++..+ .+..+||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 679999999999999999998521 2368999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH-----HHHhhc----C-CCcEEeccCCccccccccccCcccchhh
Q 013780 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDL----N-LPAVLLGSKDKVSSSGLISRSSKIVSFH 172 (436)
Q Consensus 103 G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (436)
|+++++++|.++.+++.++++.++++++++++... ...... . .+.+++... .+...++
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 169 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDG------------DGDDSFD 169 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecC------------CCCcCHH
Confidence 99999999999999999999999999999987542 111111 1 112222111 0111233
Q ss_pred HHhhhcCCC--CC----CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHH
Q 013780 173 DLIELSGSV--TD----IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFH 246 (436)
Q Consensus 173 ~~~~~~~~~--~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 246 (436)
.++...... .. .......++++++++|||||||.||+|+++|+++...+........+.. ++++++.+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~pl~h 247 (538)
T TIGR03208 170 RVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGG--GDVILMASPMAH 247 (538)
T ss_pred HHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCC--CCeEEEeCCchh
Confidence 332211100 00 1122356789999999999999999999999999888776655554433 399999999999
Q ss_pred HHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHH
Q 013780 247 VFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELM 326 (436)
Q Consensus 247 ~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~ 326 (436)
.+++...++.++..|+++++.+.+++..+++.++++++|++.++|.++..+..........++++|.+++||+++++++.
T Consensus 248 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~ 327 (538)
T TIGR03208 248 QTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILV 327 (538)
T ss_pred HHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHH
Confidence 99987788999999999999988999999999999999999999999999887654445578899999999999999999
Q ss_pred HHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCc
Q 013780 327 EDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGI 406 (436)
Q Consensus 327 ~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~ 406 (436)
+++.+.++ +++++ .||+||++++.+............++|+|+++++++|+|+ ++.+++.|+.|||+++|+.++.|
T Consensus 328 ~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~-~~~~~~~g~~Gel~v~g~~~~~g- 403 (538)
T TIGR03208 328 ERAWELLG-ALIVS-AWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDA-NGAKLSQGETGRLLVRGCSNFGG- 403 (538)
T ss_pred HHHHHHcC-CeEEe-eeccCcCCCccccCcccchhhccCcccccCCCCEEEEECC-CCCCCcCCCCcEEEEecCccccc-
Confidence 99999987 89999 9999999876654433211223568999999999999994 78999999999999999999999
Q ss_pred cccCChhhhhhhccccccCCeeecCCCCC
Q 013780 407 VYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 407 ~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+++|+.+.. ..++||+|||+|+
T Consensus 404 -y~~~~~~~~~-----~~~~~~~TGD~~~ 426 (538)
T TIGR03208 404 -YLKRPHLNST-----DAEGWFDTGDLAF 426 (538)
T ss_pred -ccCCcccccc-----cCCCceeccceEE
Confidence 9999987653 2578999999873
No 54
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-50 Score=403.72 Aligned_cols=397 Identities=24% Similarity=0.389 Sum_probs=314.2
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.|+.+.|.++++++|+++|++.. ++.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v 101 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 57999999999999999999876 68999999999999999999885 9999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC----CcEEecc-CCccccc-c--------------ccccC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGS-KDKVSSS-G--------------LISRS 165 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~-~--------------~~~~~ 165 (436)
++++++.++.+++.++++.++++++++++...+.+..... ...+... ....... . .....
T Consensus 102 ~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 102 VVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred EeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 9999999999999999999999999998755443322110 1111000 0000000 0 00000
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhcc--------CCCCcE
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV--------GELDHV 237 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--------~~~~~~ 237 (436)
.....+++....... ..........+++++|+|||||||.||+|+++|+++..+.......+... ...+++
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (562)
T PRK12492 182 PQAVPFKQALRQGRG-LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEV 260 (562)
T ss_pred cccccHHHHHhccCC-CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeE
Confidence 112234444332211 11222345678899999999999999999999999987766554443211 111267
Q ss_pred EEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEe
Q 013780 238 VLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGS 316 (436)
Q Consensus 238 ~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~ 316 (436)
+++.+|++|.+++...++..+..|.++++. .++++..+++.++++++|++.++|+++..|.+.......+++++|.+++
T Consensus 261 ~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 340 (562)
T PRK12492 261 MIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNS 340 (562)
T ss_pred EEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEe
Confidence 889999999999876777888888877665 4678999999999999999999999999999887666667899999999
Q ss_pred cCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEE
Q 013780 317 GAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIW 396 (436)
Q Consensus 317 gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~ 396 (436)
||+++++++.++|.+.++ +++++ .||+||++++++...... ..+.+++|+|+++++++|+|+ ++.++++|+.|||+
T Consensus 341 gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~~~~v~ivd~-~~~~~~~g~~Gel~ 416 (562)
T PRK12492 341 GGTALVKATAERWEQLTG-CTIVE-GYGLTETSPVASTNPYGE-LARLGTVGIPVPGTALKVIDD-DGNELPLGERGELC 416 (562)
T ss_pred ccccCCHHHHHHHHHHhC-Cceee-ccCccccCceeeecCCcc-cccCCccceecCCCEEEEECC-CCCCCCCCCceEEE
Confidence 999999999999999887 99999 999999987665443321 345688999999999999995 88999999999999
Q ss_pred EecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 397 VRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 397 v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++|+.++.| ||++|+.+.+.|. .++||+|||+|+
T Consensus 417 v~g~~~~~g--Y~~~~~~t~~~~~---~~g~~~TGD~g~ 450 (562)
T PRK12492 417 IKGPQVMKG--YWQQPEATAEALD---AEGWFKTGDIAV 450 (562)
T ss_pred EeCCccccc--cccCchhhhhccc---CCCceecCcEEE
Confidence 999999999 9999999988763 468999999863
No 55
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-50 Score=410.19 Aligned_cols=406 Identities=22% Similarity=0.268 Sum_probs=308.5
Q ss_pred CCcCCCCCCCch-HHHHhhhcccCCCceEEEeCC----CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcH
Q 013780 18 PLVLPSDPSFSM-VHFLFRNSASYSSKLALIDAD----SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (436)
Q Consensus 18 ~~~~~~~~~~ti-~~~l~~~~~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~ 92 (436)
..|+++. ..|+ .+.|.++++.+|+++|+++.. ..+.+||+||.+++.++|+.|++.|+++||+|+++++|++++
T Consensus 44 ~~wf~~~-~~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~ 122 (629)
T PRK10524 44 ARWFVGG-RTNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA 122 (629)
T ss_pred CccCCCc-EeeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH
Confidence 3566653 3666 445667788899999998632 236899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHh---h-c--CCCcEEeccCCccc
Q 013780 93 PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVK---D-L--NLPAVLLGSKDKVS 157 (436)
Q Consensus 93 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~---~-~--~~~~~~~~~~~~~~ 157 (436)
++++|||+++|+++++++|.++.+++.+++++++++++|+++... +.+. . . ....+++.......
T Consensus 123 ~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 202 (629)
T PRK10524 123 AFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAP 202 (629)
T ss_pred HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999999976421 1111 1 1 11222222111000
Q ss_pred cccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhh-HHhhhhccCCCCc
Q 013780 158 SSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLM-ISAHQELVGELDH 236 (436)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~ 236 (436)
..........+.++...... .........++++++|+|||||||.||+|+++|.++...... ......+ ..++
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~--~~~d 276 (629)
T PRK10524 203 ---MARVAGRDVDYATLRAQHLG-ARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGG--KAGE 276 (629)
T ss_pred ---cCcccCCcccHHHHHhcCCC-CCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCC--CCCC
Confidence 00001112234444333211 111122345789999999999999999999999987544322 2222222 2339
Q ss_pred EEEechhHHHHHHHHHHHHhhccCCcEEEEcC----CCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCc
Q 013780 237 VVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG----KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISS 310 (436)
Q Consensus 237 ~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~----~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~ 310 (436)
++++..|+.|..+....++.++..|+++++.+ ..++..+++.++++++|+++++|++++.|.+.... ...++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~ 356 (629)
T PRK10524 277 TFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSS 356 (629)
T ss_pred EEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhh
Confidence 99999999999888767899999999998875 34789999999999999999999999998876432 3456889
Q ss_pred ceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCC--CCCccCcCccccccCCcEEEEEeCCCCccCC
Q 013780 311 LKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENP--LVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP 388 (436)
Q Consensus 311 lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~--~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~ 388 (436)
||.+++||+++++++.+++.+.++ .++++ .||+||++..+..... .....+++++|+|+++++++|+|+++|++++
T Consensus 357 lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~ 434 (629)
T PRK10524 357 LRALFLAGEPLDEPTASWISEALG-VPVID-NYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCG 434 (629)
T ss_pred eeEEEEeCCCCCHHHHHHHHHhcC-CCeEe-ccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCC
Confidence 999999999999999999999997 89999 9999999854332222 1113457899999999999999965899999
Q ss_pred CCCceEEEEecC---CcccCccccCChhhhhhhc-cccccCCeeecCCCCC
Q 013780 389 PNQLGEIWVRGP---NVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQT 435 (436)
Q Consensus 389 ~g~~Gel~v~g~---~~~~g~~Y~~~~~~~~~~~-~~~~~~~~~~tgD~~~ 435 (436)
.|+.|||+++|| .++.| ||++++.+.+.+ ..+ .++||+|||+|+
T Consensus 435 ~g~~Gel~i~gp~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~TGDl~~ 482 (629)
T PRK10524 435 PNEKGVLVIEGPLPPGCMQT--VWGDDDRFVKTYWSLF-GRQVYSTFDWGI 482 (629)
T ss_pred CCCcEEEEEcCCCChhhcCC--ccCChHHHHHhhhccC-CCcEEEcCCcEE
Confidence 999999999998 57889 999998776644 112 467999999873
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-50 Score=403.09 Aligned_cols=390 Identities=20% Similarity=0.290 Sum_probs=306.8
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.+.|.++++++|+++|+++.+.+..+||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|+++
T Consensus 16 ~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 95 (534)
T PRK05852 16 PRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVV 95 (534)
T ss_pred ccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEE
Confidence 77999999999999999999986555789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC---CcEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL---PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
++++|.++.+++.++++.++++++|++............ ...+...... .................. ..
T Consensus 96 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~ 167 (534)
T PRK05852 96 VPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDS-------GPSGGTLSVHLDAATEPT-PA 167 (534)
T ss_pred eecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccc-------cccccccccccccccCCC-cc
Confidence 999999999999999999999999988643321111100 0111110000 000000000000000000 00
Q ss_pred CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
........++.++++|||||||.||+|.++|+++..++........+.. +|++++..|++|.+++...++.++..|++
T Consensus 168 ~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 245 (534)
T PRK05852 168 TSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSP--RDATVAVMPLYHGHGLIAALLATLASGGA 245 (534)
T ss_pred ccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCC--cceEEEecCcchhHHHHHHHHHHHhcCCe
Confidence 1111223467899999999999999999999999988777665554433 39999999999999998789999999999
Q ss_pred EEEcC--CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccC--ccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeee
Q 013780 264 VVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR--KFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIF 339 (436)
Q Consensus 264 v~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~--~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~ 339 (436)
++++. .+++..+++.++++++|+++++|+++..|.+..... ...++++|.+.++|+++++++++.+.+.|+ .+++
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~-~~v~ 324 (534)
T PRK05852 246 VLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFA-APVV 324 (534)
T ss_pred EEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhC-CChh
Confidence 99864 578999999999999999999999999998865432 345789999999999999999999999997 9999
Q ss_pred eccccccccCCcccccCCCC---CccCcCccccc--cCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhh
Q 013780 340 QVGYGMTETCAPISLENPLV---GVRRSGSAGTL--VAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVF 414 (436)
Q Consensus 340 ~~~YG~tE~~~~~~~~~~~~---~~~~~~~~G~p--~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~ 414 (436)
+ .||+||++..++...... ......++|.+ .++++++|+|+ +++++++|+.|||+++|+.++.| ||++++.
T Consensus 325 ~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~-~g~~~~~g~~Gel~v~g~~v~~g--Y~~~~~~ 400 (534)
T PRK05852 325 C-AFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGS-DGLPLPAGAVGEVWLRGTTVVRG--YLGDPTI 400 (534)
T ss_pred h-ccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECC-CCCCCCCCCceEEEEecCcccch--hcCCccc
Confidence 9 999999987665433210 01112234444 69999999995 78999999999999999999999 9999999
Q ss_pred hhhhccccccCCeeecCCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.+.| .++||+|||+|+
T Consensus 401 t~~~~----~~g~~~TGD~~~ 417 (534)
T PRK05852 401 TAANF----TDGWLRTGDLGS 417 (534)
T ss_pred chhhh----cCCCcccCceEE
Confidence 99888 477999999763
No 57
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-50 Score=406.20 Aligned_cols=385 Identities=18% Similarity=0.271 Sum_probs=299.1
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.+.|.+.++++|+++|+++.+.+..+||+||.+++.++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~ 93 (540)
T PRK05857 14 STVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIA 93 (540)
T ss_pred cchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 57999999999999999999876545789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC---CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
+|+++.++.+++.++++.++++++|+++.......... ....++..+.. .... .+.+..... ..
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~---~~ 160 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIA--------AVTR--ESEHSLDAA---SL 160 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecc--------cccc--ccccccccc---cc
Confidence 99999999999999999999999999876532211111 01111111100 0000 000000000 00
Q ss_pred CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhh-hh-ccCCCCcEEEechhHHHHHHHHHHHHhhccCC
Q 013780 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAH-QE-LVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (436)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 261 (436)
.......++++++++|||||||.||+|.++|.++.++....... .. ......+++++.+|++|..+++ ..+.+++.|
T Consensus 161 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G 239 (540)
T PRK05857 161 AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHG 239 (540)
T ss_pred ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcc
Confidence 11223467899999999999999999999999998765432211 00 1112238899999999999986 677889999
Q ss_pred cEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 262 ~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
+++++. +.++..+++.++++++|+++++|+++..|.+.......+++++|.+++||++++....+ +.+.++ +++++
T Consensus 240 ~~~v~~-~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~g-~~i~~- 315 (540)
T PRK05857 240 GLCVTG-GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEATG-VRTAQ- 315 (540)
T ss_pred eeEEec-CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHhC-Ceeec-
Confidence 988764 56889999999999999999999999999887766667889999999999999988775 555666 99999
Q ss_pred cccccccCCcccccCCCCC---ccCcCccccccCCcEEEEEeCCCCccC-----CCCCceEEEEecCCcccCccccCChh
Q 013780 342 GYGMTETCAPISLENPLVG---VRRSGSAGTLVAGVEAQIVSVDTLKPL-----PPNQLGEIWVRGPNVTPGIVYINFFV 413 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~---~~~~~~~G~p~~~~~v~i~d~~~~~~~-----~~g~~Gel~v~g~~~~~g~~Y~~~~~ 413 (436)
.||+||++......+.... ..+++++|+|++|++++|+|++...++ +.|+.|||+++|+.++.| ||++++
T Consensus 316 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~G--Y~~~~~ 393 (540)
T PRK05857 316 VYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLG--YWNNPE 393 (540)
T ss_pred ccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhh--hhCCcc
Confidence 9999999864443322211 235689999999999999996433333 457899999999999999 999999
Q ss_pred hhhhhccccccCCeeecCCCCC
Q 013780 414 FTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 414 ~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.+.+.| .+|||+|||+|+
T Consensus 394 ~t~~~~----~~g~~~TGDlg~ 411 (540)
T PRK05857 394 RTAEVL----IDGWVNTGDLLE 411 (540)
T ss_pred chhhhc----CCCceeccceEE
Confidence 998887 478999999874
No 58
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=9.2e-50 Score=399.47 Aligned_cols=382 Identities=24% Similarity=0.355 Sum_probs=314.1
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
+.|+.+.|.+.++.+|+++|+++. ++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~ 97 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAI 97 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCE
Confidence 378999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-----CcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
++|+++.++.+++..+++.+++++++++......+..... +.++....... . .....+.. ..+....
T Consensus 98 ~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~-~~~~~~~-- 169 (542)
T PRK06155 98 AVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPAS-V----SVPAGWST-APLPPLD-- 169 (542)
T ss_pred EEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccc-c----ccccccch-hhhcccC--
Confidence 9999999999999999999999999999877666544321 12222111100 0 00000000 0011000
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
.........++++++|+|||||||.||+|+++|.++............+. ..+++++.+|++|..++. .++.++..
T Consensus 170 -~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~--~~~~~l~~~pl~~~~~~~-~~~~~l~~ 245 (542)
T PRK06155 170 -APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIG--ADDVLYTTLPLFHTNALN-AFFQALLA 245 (542)
T ss_pred -CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCC--CCCEEEEecCHHHHHHHH-HHHHHHHc
Confidence 11112334678999999999999999999999999987765544444443 339999999999999986 67899999
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 261 G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
|+++++.+++++..+++.|+++++|+++++|+++..|.+.........+++|.++.|| +++++.+.+++.++ +++++
T Consensus 246 G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v~~ 322 (542)
T PRK06155 246 GATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFG-VDLLD 322 (542)
T ss_pred CceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcC-CCEEe
Confidence 9999999999999999999999999999999999999888766666778899888666 57899999999997 89999
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecC---CcccCccccCChhhhhh
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP---NVTPGIVYINFFVFTLF 417 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~---~~~~g~~Y~~~~~~~~~ 417 (436)
.||+||++.++..... ..+++++|.|.++++++|+|+ ++++++.|+.|||+++|+ .++.| |+++++.+.+
T Consensus 323 -~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d~-~~~~~~~g~~Gei~v~~~~~~~~~~G--Y~~~~~~~~~ 395 (542)
T PRK06155 323 -GYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVDE-HDQELPDGEPGELLLRADEPFAFATG--YFGMPEKTVE 395 (542)
T ss_pred -eecccccCccccCCCC---CCCCCCcCccCCCceEEEECC-CCCCCCCCCceEEEEecCCccccchh--hcCCHHHHHH
Confidence 9999999877654322 456789999999999999995 799999999999999998 69999 9999999988
Q ss_pred hccccccCCeeecCCCCC
Q 013780 418 LWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 418 ~~~~~~~~~~~~tgD~~~ 435 (436)
.| .++||+|||+|+
T Consensus 396 ~~----~~~~~~TGD~~~ 409 (542)
T PRK06155 396 AW----RNLWFHTGDRVV 409 (542)
T ss_pred hh----cCCcEeccceEE
Confidence 87 478999999764
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=8.4e-50 Score=398.47 Aligned_cols=390 Identities=24% Similarity=0.333 Sum_probs=316.9
Q ss_pred chHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
++.+.|.+.++++|+++|+.+. ++.+||+||.+++.++|+.|.+.|+.+|++|+++++|+++++++++||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 3678899999999999999987 68999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-----CcEEeccCCccccccccccCcccchhhHHhhhcCCCC
Q 013780 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (436)
Q Consensus 108 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (436)
|+++..+.+++..+++.+++++++++....+.+..... ..++...+... ..........++++.....
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAH----ASEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCccc----ccCCccccccHHHhhcccc---
Confidence 99999999999999999999999998876654433221 11222111100 0001112234554443322
Q ss_pred CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
.........+++++++|||||||.||+|.+||+++..++........+.. .+++++.+|++|.+++. .++.++..|+
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~--~d~~l~~~p~~~~~~~~-~~~~~l~~G~ 228 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRP--DDRLLAVLPLSFDYGFN-QLTTAFYVGA 228 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCc--ccEEEEECchhhHhHHH-HHHHHHHcCC
Confidence 11223345678999999999999999999999999988776655544433 39999999999999986 7889999999
Q ss_pred EEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 263 ~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
++++.+.+++..+++.++++++|++.++|+++..|.+.... ...++++|.+++||+++++++.+.+++.+++..+++ .
T Consensus 229 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~-~ 306 (515)
T TIGR03098 229 TVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFL-M 306 (515)
T ss_pred EEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEee-e
Confidence 99999889999999999999999999999999999875332 236789999999999999999999999997789999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc--
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG-- 420 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~-- 420 (436)
||+||++....... .....+++++|+|+++++++|+| +++++++.|+.|||+++|+.++.| ||++++.+...+.
T Consensus 307 YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~g--y~~~~~~~~~~~~~~ 382 (515)
T TIGR03098 307 YGLTEAFRSTYLPP-EEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMG--YWNDPEKTAERFRPL 382 (515)
T ss_pred eccccccceEeccc-ccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhcc--ccCCchhhhhhhhcc
Confidence 99999876544432 22245678999999999999999 489999999999999999999999 9999998877651
Q ss_pred ------ccccCCeeecCCCCC
Q 013780 421 ------CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ------~~~~~~~~~tgD~~~ 435 (436)
+-..++|++|||+|+
T Consensus 383 ~~~~~~~~~~~~~~~TGD~~~ 403 (515)
T TIGR03098 383 PPRPGELHLPELAVWSGDTVR 403 (515)
T ss_pred CCccccccccccceeccceEE
Confidence 111235899999863
No 60
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-50 Score=411.65 Aligned_cols=383 Identities=22% Similarity=0.323 Sum_probs=293.7
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCCC-----C--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHH
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDADS-----D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~~-----~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~l 97 (436)
+.+|+.+++.++++++|+++|+++.+. + ..+||+||.++++++|+.|.+. +++||+|+++++|+++++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 348999999999999999999986421 2 4899999999999999999886 8999999999999999999999
Q ss_pred HHHHhCCeEeec-CCCCC--HHHHHHHHHhcCCcEEEEccchHHHHhhcC-------CCcEEeccCCccccccccccCcc
Q 013780 98 GVIAIGAIASTA-NPVYT--VSELSKQVKDSNPKLVITVPELWDKVKDLN-------LPAVLLGSKDKVSSSGLISRSSK 167 (436)
Q Consensus 98 A~~~~G~~~v~l-~~~~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 167 (436)
||+++|++++|+ ++.++ .+++.++++.++++++|+++...+.+.... ...++. .+.
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~------------- 176 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIA-IDA------------- 176 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEE-ecc-------------
Confidence 999999999999 57766 789999999999999999887665443221 011111 110
Q ss_pred cchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHH
Q 013780 168 IVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHV 247 (436)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 247 (436)
+..... .........++++++|+|||||||.||||+++|+++..++......... ...++++++.+|++|.
T Consensus 177 ------~~~~~~--~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 177 ------IPDSAG--ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDL-LDRNTHGVSWLPLYHD 247 (612)
T ss_pred ------cccccc--ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhcc-CCCCceEEEeCCcccc
Confidence 000000 1111223456899999999999999999999999998776654444331 1233899999999999
Q ss_pred HHHHHHHHhhccCCcEEEEcC-CC--CHHHHHHHHH--HhcceEEEecHHHHHHHHhccc----cCccCCCcceEEEecC
Q 013780 248 FGLSVILYDQLQKGNCVVSMG-KF--DIEMALRAIE--KYRVTVWWVVPPIILALAKNSL----VRKFDISSLKLVGSGA 318 (436)
Q Consensus 248 ~g~~~~~~~~l~~G~~v~~~~-~~--~~~~~~~~l~--~~~~t~l~~~p~~~~~l~~~~~----~~~~~l~~lr~i~~gg 318 (436)
+|+...++.++..|.++++.+ .+ ++..+++.++ +++++.+.++|+++..+..... ....+++++| +++||
T Consensus 248 ~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg 326 (612)
T PRK12476 248 MGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGS 326 (612)
T ss_pred cchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecc
Confidence 999744445555444444443 23 8899999995 5899999999998887766421 1344688999 99999
Q ss_pred CCCcHHHHHHHHhhCC-----CCeeeeccccccccCCcccccCCCCC-------------------------ccCcCccc
Q 013780 319 APLGKELMEDCQKNIP-----GATIFQVGYGMTETCAPISLENPLVG-------------------------VRRSGSAG 368 (436)
Q Consensus 319 ~~l~~~~~~~~~~~~~-----~~~i~~~~YG~tE~~~~~~~~~~~~~-------------------------~~~~~~~G 368 (436)
+++++++.++|++.|+ ...+++ .||+||++..++...+... ..+.+++|
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G 405 (612)
T PRK12476 327 EPVSIDAVTTFNKAFAPYGLPRTAFKP-SYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCG 405 (612)
T ss_pred cCCCHHHHHHHHHHHHhcCCCcccccc-ccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCC
Confidence 9999999999999873 234788 9999998765543322100 01235889
Q ss_pred cccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc-----c----------ccCCeeecCCC
Q 013780 369 TLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC-----E----------HTDSFIRGKDQ 433 (436)
Q Consensus 369 ~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~-----~----------~~~~~~~tgD~ 433 (436)
+|+++++++|+|++++++++.|+.|||+++|++++.| ||++|+.|.+.|.- . ..++||+|||+
T Consensus 406 ~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~G--Y~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDl 483 (612)
T PRK12476 406 QVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRG--YWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDL 483 (612)
T ss_pred CcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCccccc--ccCChHHHHHHHhhhhccccccccccccccCCCCeeecccc
Confidence 9999999999997559999999999999999999999 99999999988721 1 12369999999
Q ss_pred CC
Q 013780 434 QT 435 (436)
Q Consensus 434 ~~ 435 (436)
|.
T Consensus 484 g~ 485 (612)
T PRK12476 484 GV 485 (612)
T ss_pred ce
Confidence 85
No 61
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-49 Score=400.49 Aligned_cols=402 Identities=25% Similarity=0.377 Sum_probs=318.1
Q ss_pred CCCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013780 22 PSDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (436)
Q Consensus 22 ~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~ 101 (436)
+.+...++.+.|.+.++++|+++|+++. +..+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||++
T Consensus 18 ~~~~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 95 (557)
T PRK07059 18 DASQYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLR 95 (557)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3344478999999999999999999987 68999999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCccccc---------------ccc
Q 013780 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSS---------------GLI 162 (436)
Q Consensus 102 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---------------~~~ 162 (436)
+|++++|++|.++.+++.++++.++++++++++.....+.... .+.++.......... ...
T Consensus 96 ~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (557)
T PRK07059 96 AGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPA 175 (557)
T ss_pred cCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999876654443321 112211110000000 000
Q ss_pred ccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc----cC-CCCcE
Q 013780 163 SRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----VG-ELDHV 237 (436)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~----~~-~~~~~ 237 (436)
...++...+.+.+..... .........++++++|+|||||||.||+|+++|.++..++......... .. .....
T Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 176 WSLPGHVRFNDALAEGAR-QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred cCCCCcccHHHHhhccCC-CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 011222344444433221 2222344567899999999999999999999999998765433222111 11 11257
Q ss_pred EEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEe
Q 013780 238 VLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGS 316 (436)
Q Consensus 238 ~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~ 316 (436)
+++.+|++|.+++....+.++..|++.++.+ +.++..+++.++++++|.+.++|.++..+.+.......+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 8889999999988767778888888766664 568999999999999999999999999999887666667889999999
Q ss_pred cCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEE
Q 013780 317 GAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIW 396 (436)
Q Consensus 317 gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~ 396 (436)
||+++++.+.++|.+.++ +++++ .||+||++.++...... ....++++|+|+++++++|+| +++++++.|+.|||+
T Consensus 335 gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~ 410 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTG-CPITE-GYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEIC 410 (557)
T ss_pred ccccCCHHHHHHHHHHhC-CCeee-ccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEE
Confidence 999999999999999987 99999 99999998776544322 234578999999999999999 578999999999999
Q ss_pred EecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 397 VRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 397 v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++|+.++.| |+++++.+.+.+ ..+|||+|||+++
T Consensus 411 v~g~~~~~g--Y~~~~~~~~~~~---~~~g~~~TGDl~~ 444 (557)
T PRK07059 411 IRGPQVMAG--YWNRPDETAKVM---TADGFFRTGDVGV 444 (557)
T ss_pred EeCCccchh--hhcCHHHHhhhc---ccCCceecCcEEE
Confidence 999999999 999999988766 2578999999763
No 62
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-50 Score=395.54 Aligned_cols=366 Identities=21% Similarity=0.343 Sum_probs=300.5
Q ss_pred hhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC
Q 013780 34 FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY 113 (436)
Q Consensus 34 ~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 113 (436)
..+++.+|+++|+.+...+..+||.|+.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 35667899999998754478999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCC
Q 013780 114 TVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTD 193 (436)
Q Consensus 114 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (436)
+.+++.+++++++++++|+++...... .. ...++++.................++
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR------TD-------------------VEDLAAFIASADALEPADTPSIPPER 136 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc------cc-------------------ccchhhhhhhccccccccCCCCCCCC
Confidence 999999999999999999986543210 00 00111111111100111122345678
Q ss_pred eEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHH
Q 013780 194 AAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIE 273 (436)
Q Consensus 194 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~ 273 (436)
+++++|||||||.||+|.++|+++...+..+....... ..+++++.+|++|.+++...++.++..|+++++.+.+++.
T Consensus 137 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~ 214 (488)
T PRK09088 137 VSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVD--AHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPK 214 (488)
T ss_pred ceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCC--CCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHH
Confidence 99999999999999999999999988766554443332 3399999999999999987788999999999999888999
Q ss_pred HHHHHHH--HhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCc
Q 013780 274 MALRAIE--KYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAP 351 (436)
Q Consensus 274 ~~~~~l~--~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~ 351 (436)
.++..+. ++++|+++++|.++..+.+........+++||.+++||++++.+..+.+.+. ++++++ .||+||++++
T Consensus 215 ~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~-~YG~TE~~~~ 291 (488)
T PRK09088 215 RTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVD-GFGMSEAGTV 291 (488)
T ss_pred HHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceee-eecccccccc
Confidence 9999886 4899999999999999988765555567899999999999999999888865 499999 9999999875
Q ss_pred ccccC-CCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeec
Q 013780 352 ISLEN-PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRG 430 (436)
Q Consensus 352 ~~~~~-~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~t 430 (436)
..... ......+++++|.|+|+++++|+| +++.+++.|+.|||+++|++++.| |+++++.+.+.+ ..++||+|
T Consensus 292 ~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--Y~~~~~~~~~~~---~~~g~~~T 365 (488)
T PRK09088 292 FGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPG--YWRRPQATARAF---TGDGWFRT 365 (488)
T ss_pred cccCCCcccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchh--hcCChhhhhhhh---cCCCCeee
Confidence 43321 111134668999999999999999 478999999999999999999999 999999988766 25789999
Q ss_pred CCCCC
Q 013780 431 KDQQT 435 (436)
Q Consensus 431 gD~~~ 435 (436)
||+|+
T Consensus 366 GDl~~ 370 (488)
T PRK09088 366 GDIAR 370 (488)
T ss_pred cceEE
Confidence 99874
No 63
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-49 Score=398.23 Aligned_cols=399 Identities=24% Similarity=0.335 Sum_probs=313.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.++++.+|+++|+.+. ++.+||.||.+++.++|+.|.++|+++|++|+++++|+++++++++||+++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 110 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVH 110 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEE
Confidence 78999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEecc-CCccccc---cccccC--c--ccchhhHH
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGS-KDKVSSS---GLISRS--S--KIVSFHDL 174 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~---~~~~~~--~--~~~~~~~~ 174 (436)
+|++|..+.+++.++++.++++++++++...+.+.... .+.+++.. .+..... ...... . ....+.++
T Consensus 111 v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (567)
T PRK06178 111 VPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDL 190 (567)
T ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccccccH
Confidence 99999999999999999999999999988776655432 12222111 1000000 000000 0 00111122
Q ss_pred hhhcCC-CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH
Q 013780 175 IELSGS-VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (436)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 253 (436)
...... ..........++++++++|||||||.||+|++||.++..+........ ......+++++.+|++|++|+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~g~~~~ 269 (567)
T PRK06178 191 LPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA-VVGGEDSVFLSFLPEFWIAGENFG 269 (567)
T ss_pred HHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh-ccCCCCcEEEEecchHHHHHHHHH
Confidence 221110 011122335678999999999999999999999999987654433222 222334899999999999999777
Q ss_pred HHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEec--CCCCcHHHHHHHHh
Q 013780 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSG--AAPLGKELMEDCQK 331 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~g--g~~l~~~~~~~~~~ 331 (436)
++.++..|+++++.+++++..++..++++++|++.++|..+..+.+.......++++++.+..+ ++++++++.++|++
T Consensus 270 ~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 349 (567)
T PRK06178 270 LLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWRA 349 (567)
T ss_pred HHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999887765555667888886544 58999999999999
Q ss_pred hCCCCeeeeccccccccCCcccccCCCC-----CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCc
Q 013780 332 NIPGATIFQVGYGMTETCAPISLENPLV-----GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGI 406 (436)
Q Consensus 332 ~~~~~~i~~~~YG~tE~~~~~~~~~~~~-----~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~ 406 (436)
.++ ..++.+.||+||+++.+....... ...+++++|+|+||++++|+|++++++++.|++|||+++|++++.|
T Consensus 350 ~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~g- 427 (567)
T PRK06178 350 LTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKG- 427 (567)
T ss_pred HhC-CcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccccc-
Confidence 998 555543799999876544332110 0235678999999999999998789999999999999999999999
Q ss_pred cccCChhhhhhhccccccCCeeecCCCCC
Q 013780 407 VYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 407 ~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
||++++.+...+ .+|||+|||+++
T Consensus 428 -Y~~~~~~~~~~~----~dg~~~TGDl~~ 451 (567)
T PRK06178 428 -YWNKPEATAEAL----RDGWLHTGDIGK 451 (567)
T ss_pred -ccCChhhhhhcc----cCCceeecceEE
Confidence 999999998877 467999999763
No 64
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-49 Score=398.05 Aligned_cols=385 Identities=23% Similarity=0.327 Sum_probs=310.3
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.++|.+.++++|+++|+++. +..+||.||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 84 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVW 84 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEE
Confidence 88999999999999999999986 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCccccccccccCcccchhhHHhhhcCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVT 182 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (436)
+++++.++.+++.++++.++++.+++++...+.+.... ....++..+. ......+.++...... .
T Consensus 85 v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~ 153 (528)
T PRK07470 85 VPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGG----------ARAGLDYEALVARHLG-A 153 (528)
T ss_pred EecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCC----------CcccccHHHHHhcCCC-C
Confidence 99999999999999999999999999987655443321 1111111110 0012244444433211 1
Q ss_pred CCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 183 DIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
........++++++|+|||||||.||+|.++|+++...+..............++++..+|++|.+++. .++ .+..|+
T Consensus 154 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~ 231 (528)
T PRK07470 154 RVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QVARGA 231 (528)
T ss_pred CCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HHhcCc
Confidence 122334567899999999999999999999999987654332222211112238999999999999985 444 456666
Q ss_pred EEEEcC--CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 263 CVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 263 ~v~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
+.++.+ .+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||++++++..+++.+.++ ..+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~~ 310 (528)
T PRK07470 232 ATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLG-KVLVQ 310 (528)
T ss_pred eEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhC-cHHHH
Confidence 665553 578999999999999999999999999999887666667899999999999999999999999987 88999
Q ss_pred ccccccccCCcccccCCCC------CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhh
Q 013780 341 VGYGMTETCAPISLENPLV------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVF 414 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~------~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~ 414 (436)
.||+||+++.+....... .....+++|+|+++++++++|+ ++++++.|+.|||+++|+.++.| |+++++.
T Consensus 311 -~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~-~~~~~~~g~~Gel~i~~~~~~~g--y~~~~~~ 386 (528)
T PRK07470 311 -YFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDD-EGRELPPGETGEICVIGPAVFAG--YYNNPEA 386 (528)
T ss_pred -hCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECC-CCCCCCCCCceEEEEeCCccchh--hcCCHHH
Confidence 999999987665432210 1235678999999999999995 88999999999999999999999 9999999
Q ss_pred hhhhccccccCCeeecCCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+...| .++||+|||+++
T Consensus 387 ~~~~~----~~~~~~TGDl~~ 403 (528)
T PRK07470 387 NAKAF----RDGWFRTGDLGH 403 (528)
T ss_pred HHhhh----cCCcEecceeEE
Confidence 98877 478999999863
No 65
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2e-49 Score=395.74 Aligned_cols=388 Identities=24% Similarity=0.303 Sum_probs=314.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCC---CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADS---DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
.|+.++|.+.++++|+++|+++.+. .+.+||.||.++++++|+.|.++|+++||+|+++++|+++++++++||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 6799999999999999999987642 2789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC------CCcEEeccCCccccccccccCcccchhhHHhhh
Q 013780 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIEL 177 (436)
Q Consensus 104 ~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (436)
+++++++|..+.+++.++++.++++.+++++.....+.+.. .+.+.+..... ........+.+....
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 159 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVAL-------PADDGVSSFTQLKAQ 159 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCC-------cccccccCHHHHhcc
Confidence 99999999999999999999999999999987766554431 12222221110 111233444444333
Q ss_pred cCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhh
Q 013780 178 SGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQ 257 (436)
Q Consensus 178 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~ 257 (436)
... .........++++++++|||||||.||+|++||.++............+ ...+++++.+|++|..+....++.+
T Consensus 160 ~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~ 236 (517)
T PRK08008 160 QPA-TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCAL--RDDDVYLTVMPAFHIDCQCTAAMAA 236 (517)
T ss_pred CCc-cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCC--CCCCeEEEecCcHHHHHHHHHHHHH
Confidence 221 1112233456899999999999999999999999998654322111112 2338999999999998887788999
Q ss_pred ccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCe
Q 013780 258 LQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGAT 337 (436)
Q Consensus 258 l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~ 337 (436)
+..|+++++.+++++..+++.++++++|++.++|.+++.+...........+++|.+.+++ +++++....|.+.++ .+
T Consensus 237 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~ 314 (517)
T PRK08008 237 FSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERFG-VR 314 (517)
T ss_pred HhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHhC-Ce
Confidence 9999999999999999999999999999999999999998876554444456788887764 789999999999987 99
Q ss_pred eeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEec---CCcccCccccCChhh
Q 013780 338 IFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG---PNVTPGIVYINFFVF 414 (436)
Q Consensus 338 i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g---~~~~~g~~Y~~~~~~ 414 (436)
+++ .||+||+++.+....... .....++|.|+++++++|+| +++++++.|+.|||+++| ++++.| ||++++.
T Consensus 315 ~~~-~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~g--y~~~~~~ 389 (517)
T PRK08008 315 LLT-SYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKE--YYLDPKA 389 (517)
T ss_pred EEe-eccccccccccccCCccc-cccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhh--HhCChHH
Confidence 999 999999986555443322 45567899999999999999 589999999999999998 589999 9999999
Q ss_pred hhhhccccccCCeeecCCCC
Q 013780 415 TLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 415 ~~~~~~~~~~~~~~~tgD~~ 434 (436)
+.+.| ..++|++|||+|
T Consensus 390 ~~~~~---~~~g~~~TGDl~ 406 (517)
T PRK08008 390 TAKVL---EADGWLHTGDTG 406 (517)
T ss_pred Hhhcc---cCCCCeeccceE
Confidence 98877 357899999975
No 66
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1e-50 Score=371.91 Aligned_cols=420 Identities=22% Similarity=0.305 Sum_probs=333.7
Q ss_pred CCcceeecCC---CCCcCCCCCCCchHHHHhhhcccCCCceEEEeCC----------CC-----------ccccHHHHHH
Q 013780 7 GRDGIYRSLR---PPLVLPSDPSFSMVHFLFRNSASYSSKLALIDAD----------SD-----------ESLSFSQFKS 62 (436)
Q Consensus 7 ~~~~~~~~~~---~~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~----------~~-----------~~~Ty~el~~ 62 (436)
.++..+|..+ +....+..+-.|+.+++.+..+++.++.++-+.+ +| .++||.|+..
T Consensus 18 ~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~ 97 (678)
T KOG1180|consen 18 HETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYE 97 (678)
T ss_pred CCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHH
Confidence 4555666553 2333344445899999999999999999983220 11 5799999999
Q ss_pred HHHHHHHHHHhcCCCCCCE-EEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 63 IVIKVSHSFRHLGITKKDV-VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 63 ~~~~la~~L~~~gv~~gd~-V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
++..+|+.|.+.|++++++ |+|+++.+.+|+++++||++.+..+|.+-..+..+.+.+-|+.++++.+||+...+..+.
T Consensus 98 ~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~ 177 (678)
T KOG1180|consen 98 RVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLK 177 (678)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHH
Confidence 9999999999999997776 999999999999999999999999999999999999999999999999999998887665
Q ss_pred hcC-----CCcEEeccC-Ccccc--c--cccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCccee
Q 013780 142 DLN-----LPAVLLGSK-DKVSS--S--GLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 211 (436)
Q Consensus 142 ~~~-----~~~~~~~~~-~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~ 211 (436)
... .+.++.... +.... + ....++..+.+|+++.+.+.... .++....++|+|+|+|||||||.||||+
T Consensus 178 ~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSGSTG~PKGVm 256 (678)
T KOG1180|consen 178 APLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSGSTGLPKGVM 256 (678)
T ss_pred HHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCCCCCCCceEE
Confidence 442 333443331 11111 1 11234567889999999887533 3344448899999999999999999999
Q ss_pred hhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHH--------HHHHHHHHhc
Q 013780 212 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIE--------MALRAIEKYR 283 (436)
Q Consensus 212 ~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~--------~~~~~l~~~~ 283 (436)
++|+|+++........... -.+.|+++.++|+.|++.+. +=+.+++.|+.+-..++.+-. .---.+..++
T Consensus 257 l~H~NiVA~~~G~~~~v~~-lg~~D~yi~yLPLAHIlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lk 334 (678)
T KOG1180|consen 257 LTHSNIVAGVTGVGENVPE-LGPKDRYIAYLPLAHILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELK 334 (678)
T ss_pred EecccHHhhhhhhcccCcc-cCCCceEEEechHHHHHHHH-HHHHHHhhCCEeecCCcceecccchhhccCCcCcccccc
Confidence 9999999998887666642 23349999999999999996 778999999999877543211 1123467789
Q ss_pred ceEEEecHHHHHHHHhcc--------------------------c--c--------------CccCCCcceEEEecCCCC
Q 013780 284 VTVWWVVPPIILALAKNS--------------------------L--V--------------RKFDISSLKLVGSGAAPL 321 (436)
Q Consensus 284 ~t~l~~~p~~~~~l~~~~--------------------------~--~--------------~~~~l~~lr~i~~gg~~l 321 (436)
||.+.++|.++.++.+.- . . +..---.||.+++||+|+
T Consensus 335 PTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapL 414 (678)
T KOG1180|consen 335 PTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPL 414 (678)
T ss_pred chhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCC
Confidence 999999999988775430 0 0 000114899999999999
Q ss_pred cHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCC--ceEEEEec
Q 013780 322 GKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ--LGEIWVRG 399 (436)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~--~Gel~v~g 399 (436)
+++..+.+..-+. +++.+ +||.||+++..+...+. +...+.+|.|++.++++++|.+++--.+.+. .|||+|+|
T Consensus 415 S~dtQrF~nic~C-~Pv~q-GYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G 490 (678)
T KOG1180|consen 415 SPDTQRFMNICFC-CPVLQ-GYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGG 490 (678)
T ss_pred CHHHHHHHHHhcc-ccccc-cccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecC
Confidence 9999999999886 89999 99999999988887776 6778899999999999999987776655554 79999999
Q ss_pred CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 400 PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 400 ~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+++..| ||++|+.|++.|...+...||+|||.|+
T Consensus 491 ~~vt~g--Y~kn~ekT~e~ft~~~G~~WF~TGDIGe 524 (678)
T KOG1180|consen 491 PNVTMG--YYKNEEKTKEDFTVEDGQRWFRTGDIGE 524 (678)
T ss_pred CccChh--hhCChhhhhhhceecCCcEEEeccccce
Confidence 999999 9999999999996533334999999986
No 67
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-50 Score=471.54 Aligned_cols=377 Identities=21% Similarity=0.266 Sum_probs=318.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 3095 ~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3095 RLVHQLIEAQVARTPEAPALVFG--DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred ccHHHHHHHHHHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 68999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|++|.++.+++.+++++++++++|++....+.+........+. .+ ....... ....+.
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~-~~~~~~ 3231 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALT-LD-------------------RLDLNGY-SENNPS 3231 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceee-ec-------------------chhhccc-CCCCCc
Confidence 99999999999999999999999999987655443221111111 11 0000000 012223
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++|+|||||||.||||+++|+++.+.+........+... ++++...|++|..+.. .++.+|..|+++++
T Consensus 3232 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~--d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~i 3308 (3956)
T PRK12467 3232 TRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDAN--DRVLLFMSFSFDGAQE-RFLWTLICGGCLVV 3308 (3956)
T ss_pred ccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcC--CEEEEecCccHhHHHH-HHHHHHhCCCEEEE
Confidence 44578899999999999999999999999999988877666655443 9999999999998875 88999999999999
Q ss_pred cCC--CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 267 MGK--FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 267 ~~~--~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
.+. +++..+++.|.++++|++.++|++++.|.+... ..++++||.+++||+++++++.++|++.+++.++++ .||
T Consensus 3309 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n-~YG 3385 (3956)
T PRK12467 3309 RDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTN-GYG 3385 (3956)
T ss_pred CCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEe-Ccc
Confidence 975 689999999999999999999999999987542 336789999999999999999999999998799999 999
Q ss_pred ccccCCcccccCCCCC---ccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhc--
Q 013780 345 MTETCAPISLENPLVG---VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW-- 419 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~~---~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~-- 419 (436)
+||++..++....... .....++|+|++|++++|+| ++++++|.|++|||+|+|+.++.| |+++|+.|.++|
T Consensus 3386 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~G--Y~~~~~~T~~~F~~ 3462 (3956)
T PRK12467 3386 PTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARG--YHQRPSLTAERFVA 3462 (3956)
T ss_pred cchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhh--ccCCcccchhhccC
Confidence 9999876654332211 12346899999999999999 589999999999999999999999 999999999998
Q ss_pred -cc-cccCCeeecCCCCC
Q 013780 420 -GC-EHTDSFIRGKDQQT 435 (436)
Q Consensus 420 -~~-~~~~~~~~tgD~~~ 435 (436)
.| ...++||+|||+|+
T Consensus 3463 ~p~~~~g~r~yrTGDl~~ 3480 (3956)
T PRK12467 3463 DPFSGSGGRLYRTGDLAR 3480 (3956)
T ss_pred CCCCCCCceeeccchhhe
Confidence 22 23457999999985
No 68
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=5.6e-50 Score=398.45 Aligned_cols=377 Identities=20% Similarity=0.265 Sum_probs=310.1
Q ss_pred chHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
++.+.|.+.++.+|+++|+.+. +..+||+||.+++.++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 5789999999999999999887 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCC
Q 013780 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDV 187 (436)
Q Consensus 108 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (436)
++++.++.+++.++++..+++.++++.......... ..+.+ + .......... ......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~--~~~~~--~----------------~~~~~~~~~~--~~~~~~ 136 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGT--QIITL--S----------------ALEQAETSGG--PVSFDH 136 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEecccccccccCC--ceEEc--h----------------HhhhhhhhcC--Cccccc
Confidence 999999999999999999999999987653322111 11110 0 1111111111 111122
Q ss_pred CCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc
Q 013780 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (436)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~ 267 (436)
...+++.++++|||||||.||+|.++|+++..+........... .++++++..|++|..++. .++.++..|+++++.
T Consensus 137 ~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~ 213 (502)
T TIGR01734 137 AVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLS--EGKQFLNQAPFSFDLSVM-DLYPCLASGGTLHCL 213 (502)
T ss_pred cCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCC--CCceEEeecCceechhHH-HHHHHHHCCCEEEEc
Confidence 34578899999999999999999999999998877655554333 338999999999999885 788999999999988
Q ss_pred CC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 268 GK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 268 ~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
++ .++..+++.+.+++++.+.++|+++..+..........+++++.++++|+++++++.+++.+.++++.+++ .||
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~yG 292 (502)
T TIGR01734 214 DKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN-TYG 292 (502)
T ss_pred CHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe-Ccc
Confidence 64 58899999999999999999999998877665545567889999999999999999999999998899999 999
Q ss_pred ccccCCcccccCCCC---CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc
Q 013780 345 MTETCAPISLENPLV---GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 421 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~---~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~ 421 (436)
+||+++.++...... ......++|.|.++++++|+|+ ++..+++|+.|||+++|+.++.| |+++++.+.+.|-.
T Consensus 293 ~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~g~~~~~g--y~~~~~~~~~~~~~ 369 (502)
T TIGR01734 293 PTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDE-EGEPLPEGEKGEIVIVGPSVSKG--YLNNPEKTAEAFFS 369 (502)
T ss_pred CCcceEEEEEEEccccccccCCccccccccCCCEEEEECC-CCCCCCCCCeeEEEEcccccccc--ccCCcccchHhhee
Confidence 999876444322111 1334568999999999999995 78999999999999999999999 99999998887632
Q ss_pred cccCCeeecCCCCC
Q 013780 422 EHTDSFIRGKDQQT 435 (436)
Q Consensus 422 ~~~~~~~~tgD~~~ 435 (436)
....+||+|||+|+
T Consensus 370 ~~~~~~~~TGDlg~ 383 (502)
T TIGR01734 370 HEGQPAYRTGDAGT 383 (502)
T ss_pred CCCcEEEECCCEEE
Confidence 23446999999874
No 69
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-49 Score=396.24 Aligned_cols=382 Identities=24% Similarity=0.316 Sum_probs=314.1
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.++|.++++++|+++|+++. +..+||.||.+++.++++.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 89 (524)
T PRK06188 12 ATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRR 89 (524)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccc-hHHHHhhcC---CC-cEEeccCCccccccccccCcccchhhHHhhhcCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPE-LWDKVKDLN---LP-AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~-~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (436)
++++|..+.+++..+++.++++.+++++. ......... .. ..++.... ......+.+......
T Consensus 90 v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-- 157 (524)
T PRK06188 90 TALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGP----------VPDGVDLLAAAAKFG-- 157 (524)
T ss_pred EecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCC----------ccchhhHHHhhhccC--
Confidence 99999999999999999999999999876 333322211 10 11111110 000011111111111
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCC
Q 013780 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKG 261 (436)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 261 (436)
.........++++++++|||||||.||+|.++|.++..++........+... +++++.+|++|..++. ++.++..|
T Consensus 158 ~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~--~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 158 PAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPAD--PRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcC--cEEEEecCchhhhhHH--HHHHHHcC
Confidence 1111122345669999999999999999999999999987766665555433 9999999999998874 57889999
Q ss_pred cEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 262 NCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 262 ~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
+++++.+.+++..+++.++++++|+++++|+++..+++.......+++++|.+++||++++++..+.+.+.++ ..+++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~- 311 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG-PIFAQ- 311 (524)
T ss_pred CEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC-chhhh-
Confidence 9999999999999999999999999999999999999887766678899999999999999999999999987 77889
Q ss_pred cccccccCCcccccCCCC----CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhh
Q 013780 342 GYGMTETCAPISLENPLV----GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLF 417 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~----~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~ 417 (436)
.||+||++..+....... ...+..++|+|+++++++|+|+ ++++++.|+.|||+++|+.++.| |+++++.+..
T Consensus 312 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~ 388 (524)
T PRK06188 312 YYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-DGREVAQGEVGEICVRGPLVMDG--YWNRPEETAE 388 (524)
T ss_pred eeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcC-CCCCCCCCCeeEEEEECcchhhh--hcCChHHhhh
Confidence 999999976655443321 1345678999999999999995 79999999999999999999999 9999999988
Q ss_pred hccccccCCeeecCCCCC
Q 013780 418 LWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 418 ~~~~~~~~~~~~tgD~~~ 435 (436)
.+ .++||+|||+++
T Consensus 389 ~~----~~g~~~TGDl~~ 402 (524)
T PRK06188 389 AF----RDGWLHTGDVAR 402 (524)
T ss_pred hh----cCCceeecceEE
Confidence 87 578999999763
No 70
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-49 Score=399.25 Aligned_cols=395 Identities=30% Similarity=0.461 Sum_probs=310.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+++.++|.+.++++|+++|+++. ++.+||+||..++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 57999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCcccccccc-------c----------cC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLI-------S----------RS 165 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-------~----------~~ 165 (436)
+|++|..+.+++..+++.++++++++++.....+.... ...+++.........+.. . ..
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccccc
Confidence 99999999999999999999999999876544332221 111111100000000000 0 00
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHH
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMF 245 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 245 (436)
.....+..+..... ..........+++++++|||||||.||+|.++|+++..++.............++++++.+|++
T Consensus 182 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 259 (563)
T PRK06710 182 ETIHLWNSVEKEVN--TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFF 259 (563)
T ss_pred chhhhhhhhhhccc--cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchH
Confidence 00001111111100 1111112235789999999999999999999999997654322221111112237889999999
Q ss_pred HHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHH
Q 013780 246 HVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKEL 325 (436)
Q Consensus 246 ~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~ 325 (436)
|.+++...++.++..|+++++.+++++..+++.|+++++|++.++|+++..+.+........++++|.+++||+++++++
T Consensus 260 ~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~~ 339 (563)
T PRK06710 260 HVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVEV 339 (563)
T ss_pred HHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHHH
Confidence 99998766778899999999998899999999999999999999999999998876555567789999999999999999
Q ss_pred HHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccC
Q 013780 326 MEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPG 405 (436)
Q Consensus 326 ~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g 405 (436)
.+++++.++ .++++ .||+||++......... ....++++|+|++++.++++|++++.+++.|+.|||+++|+.++.|
T Consensus 340 ~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~g 416 (563)
T PRK06710 340 QEKFETVTG-GKLVE-GYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKG 416 (563)
T ss_pred HHHHHHhhC-CCEec-ccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchh
Confidence 999999886 89999 99999998755433221 1345678999999999999998889999999999999999999999
Q ss_pred ccccCChhhhhhhccccccCCeeecCCCC
Q 013780 406 IVYINFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 406 ~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
|+++++.+...+ .++||+|||++
T Consensus 417 --Y~~~~~~~~~~~----~~g~~~TGD~~ 439 (563)
T PRK06710 417 --YWNKPEETAAVL----QDGWLHTGDVG 439 (563)
T ss_pred --hhCChHHHhhhc----ccCcccccceE
Confidence 999999998877 47899999976
No 71
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.4e-49 Score=396.23 Aligned_cols=379 Identities=22% Similarity=0.279 Sum_probs=308.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++ |+++|+++. ++.+||.||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 25 ~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 25 LPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred ccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 679999988887 999999987 7899999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccch--------HHHHhhcC--CCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPEL--------WDKVKDLN--LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
+++.+.....++..+++.++++++++++.. .+.+.... ...+++. . ..+...+.+...
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~ 168 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLL-N-----------DDGEHSLDDAIN 168 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEe-c-----------CCCCccHHHHhh
Confidence 877777778889999999999999998642 22232221 1111111 1 011223344443
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHH-HHH
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV-ILY 255 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 255 (436)
... .........++++++++|||||||.||+|++||+++..++........+.. ++++++.+|++|.+++.. .++
T Consensus 169 ~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~--~~~~l~~~p~~h~~~~~~~~~~ 244 (536)
T PRK10946 169 HPA--EDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTP--QTRYLCALPAAHNYPMSSPGAL 244 (536)
T ss_pred Ccc--cccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCC--CceEEEecCccccccchhhhHH
Confidence 322 222233446789999999999999999999999999998877655555533 399999999999988753 468
Q ss_pred hhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhc--cccCccCCCcceEEEecCCCCcHHHHHHHHhhC
Q 013780 256 DQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKN--SLVRKFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (436)
Q Consensus 256 ~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~--~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~ 333 (436)
.++..|+++++.+++++..+++.++++++|++.++|.++..+++. .......++++|.+++||+++++++.+++.+.+
T Consensus 245 ~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~ 324 (536)
T PRK10946 245 GVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL 324 (536)
T ss_pred HHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc
Confidence 889999999999888999999999999999999999999999876 222334678999999999999999999999999
Q ss_pred CCCeeeeccccccccCCcccccCCCCCccCcCcccccc-CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCCh
Q 013780 334 PGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFF 412 (436)
Q Consensus 334 ~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~ 412 (436)
+ +++++ .||+||++..... ..........++|+|+ |+++++|+| +++++++.|+.|||+++|+.++.| ||+++
T Consensus 325 g-~~~~~-~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~G--Y~~~~ 398 (536)
T PRK10946 325 G-CQLQQ-VFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRG--YYKSP 398 (536)
T ss_pred C-CeEEE-eecccccceeeec-CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchh--hcCCc
Confidence 7 99999 9999996543322 1221134568899999 899999999 589999999999999999999999 99999
Q ss_pred hhhhhhccccccCCeeecCCCC
Q 013780 413 VFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 413 ~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
+.+.+.| ..++||+|||+|
T Consensus 399 ~~t~~~~---~~d~~~~TGDl~ 417 (536)
T PRK10946 399 QHNASAF---DANGFYCSGDLV 417 (536)
T ss_pred ccchhhc---ccCCceecCceE
Confidence 9988776 357899999987
No 72
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.2e-49 Score=392.49 Aligned_cols=378 Identities=25% Similarity=0.368 Sum_probs=309.5
Q ss_pred HHHHhhh-cccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEee
Q 013780 30 VHFLFRN-SASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAST 108 (436)
Q Consensus 30 ~~~l~~~-~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~ 108 (436)
.++|.++ ++.+|+++|+++. +..+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~ 84 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVA 84 (508)
T ss_pred HHHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEee
Confidence 3445555 5779999999986 789999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 109 ANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 109 l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
+++..+.+++.++++.++++++++++.....+.+.. .+.++.... .......+.++..... ..
T Consensus 85 l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--~~ 152 (508)
T TIGR02262 85 LNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGR----------PEAGEVQLAELLATES--EQ 152 (508)
T ss_pred ccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCC----------CCcccccHHHHhhcCC--Cc
Confidence 999999999999999999999999987766554321 111221111 0111223344333222 22
Q ss_pred CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhH-HhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 184 IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMI-SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
..+....++++++++|||||||.||+|.++|+++...+... .....+ ..+++++...|++|.+++...++.++..|+
T Consensus 153 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~ 230 (508)
T TIGR02262 153 FKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGI--REDDVVFSAAKLFFAYGLGNALTFPMSVGA 230 (508)
T ss_pred cCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCC--CCCCEEEEcCchHHHHHHHHHHHHHHHcCc
Confidence 23344567899999999999999999999999998776542 222223 233899999999999999767888899999
Q ss_pred EEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 263 CVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 263 ~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
++++.+ .+++..+++.|+++++|+++++|.++..+.+.........+++|.+++||+++++++.+.|++.++ +++++
T Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~v~~- 308 (508)
T TIGR02262 231 TTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFG-VDIVD- 308 (508)
T ss_pred eEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhC-Cchhh-
Confidence 998875 468999999999999999999999998887765444445679999999999999999999999997 89999
Q ss_pred cccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc
Q 013780 342 GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 421 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~ 421 (436)
.||+||++++....... ....+++|+|+++++++|+| +++.++++|++|||+++|+.++.| |+++++.+...|
T Consensus 309 ~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~g--Y~~~~~~~~~~~-- 381 (508)
T TIGR02262 309 GIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATM--YWNNRAKTRDTF-- 381 (508)
T ss_pred CccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccc--cCCCHHHhHhhh--
Confidence 99999998765544332 34567899999999999999 689999999999999999999999 999999999887
Q ss_pred cccCCeeecCCCC
Q 013780 422 EHTDSFIRGKDQQ 434 (436)
Q Consensus 422 ~~~~~~~~tgD~~ 434 (436)
.++|++|||++
T Consensus 382 --~~~~~~TGD~~ 392 (508)
T TIGR02262 382 --QGEWTRSGDKY 392 (508)
T ss_pred --hcCceeccceE
Confidence 57899999976
No 73
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-49 Score=403.91 Aligned_cols=401 Identities=20% Similarity=0.230 Sum_probs=303.5
Q ss_pred CcCCCCCCCchHHHHhhhcccCCCceEEEeCCC-C--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHH
Q 013780 19 LVLPSDPSFSMVHFLFRNSASYSSKLALIDADS-D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPIC 95 (436)
Q Consensus 19 ~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~ 95 (436)
.|+++ +..|+.+.+.++ .+|+++|+++.+. + +.+||+||.+++.++|+.|++.|+++||+|+|+++|+++++++
T Consensus 79 ~wf~~-~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~ 155 (655)
T PRK03584 79 RWFPG-ARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVA 155 (655)
T ss_pred eeCCC-CEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 45554 347888888764 6899999987532 2 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHhh----cC-CCcEEeccCCccccccc
Q 013780 96 FLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKD----LN-LPAVLLGSKDKVSSSGL 161 (436)
Q Consensus 96 ~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~----~~-~~~~~~~~~~~~~~~~~ 161 (436)
+|||+++|++++++++.++.+++.++++.++++++|+++... +.+.. .. .+.+++...... ...
T Consensus 156 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 233 (655)
T PRK03584 156 MLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGP--AAA 233 (655)
T ss_pred HHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCC--ccc
Confidence 999999999999999999999999999999999999986532 11111 11 112222111000 000
Q ss_pred cccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhh-hhhHHhhhhccCCCCcEEEe
Q 013780 162 ISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAA-SLMISAHQELVGELDHVVLC 240 (436)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 240 (436)
.........++++...... ..........+++++|+|||||||.||||+++|++++.+ .........+ ..+|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~~ 310 (655)
T PRK03584 234 AAALPGALLWEDFLAPAEA-AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDL--GPGDRFFW 310 (655)
T ss_pred ccccCCcccHHHHhhcccc-CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCC--CCCCEEEE
Confidence 0111223456665542211 122233456789999999999999999999999987644 3322233333 23399999
Q ss_pred chhHHHHHHHHHHHHhhccCCcEEEEcC----CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccc--cCccCCCcceEE
Q 013780 241 VLPMFHVFGLSVILYDQLQKGNCVVSMG----KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFDISSLKLV 314 (436)
Q Consensus 241 ~~p~~~~~g~~~~~~~~l~~G~~v~~~~----~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~--~~~~~l~~lr~i 314 (436)
..++.|+.+. .++.+|..|+++++.+ .+++..+++.++++++|++.++|+++..+.+... ....++++||.+
T Consensus 311 ~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i 388 (655)
T PRK03584 311 YTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTI 388 (655)
T ss_pred cCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEE
Confidence 9999887543 4678999999999874 2479999999999999999999999999877532 234578999999
Q ss_pred EecCCCCcHHHHHHHHhhCC-CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCce
Q 013780 315 GSGAAPLGKELMEDCQKNIP-GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 393 (436)
Q Consensus 315 ~~gg~~l~~~~~~~~~~~~~-~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~G 393 (436)
++||+++++++.+++.+.++ ++.+.+ .||+||+++......+.. ..+++++|.|.+|++++|+|+ +|+++ .|+.|
T Consensus 389 ~~~Ge~l~~~~~~~~~~~~~~~~~~~~-~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~~~ivd~-~g~~~-~g~~G 464 (655)
T PRK03584 389 GSTGSPLPPEGFDWVYEHVKADVWLAS-ISGGTDICSCFVGGNPLL-PVYRGEIQCRGLGMAVEAWDE-DGRPV-VGEVG 464 (655)
T ss_pred EEecCCCCHHHHHHHHHHhCCCceEEe-ccChHhhhcccccCCCCC-CcCCCccCCCcCCceeEEECC-CCCCC-CCCce
Confidence 99999999999999999984 588899 999999865444332221 456789999999999999994 78888 79999
Q ss_pred EEEEecC--CcccCccccCChhhhhhhcccccc-CCeeecCCCCC
Q 013780 394 EIWVRGP--NVTPGIVYINFFVFTLFLWGCEHT-DSFIRGKDQQT 435 (436)
Q Consensus 394 el~v~g~--~~~~g~~Y~~~~~~~~~~~~~~~~-~~~~~tgD~~~ 435 (436)
||+++|+ +++.| ||++++.++....++.. ++||+|||+|+
T Consensus 465 eL~v~gp~p~~~~g--y~~~~~~~~~~~~~~~~~~g~~~TGDl~~ 507 (655)
T PRK03584 465 ELVCTKPFPSMPLG--FWNDPDGSRYRDAYFDTFPGVWRHGDWIE 507 (655)
T ss_pred EEEEccCCCCCcce--eeCCCccchHHHhhhccCCCEeecCCeEE
Confidence 9999996 78999 99999865432233322 56889999874
No 74
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.8e-49 Score=398.63 Aligned_cols=391 Identities=21% Similarity=0.299 Sum_probs=298.2
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
+.|+.++|.+.++.+|+++|+++. +..+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|++
T Consensus 13 ~~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~ 90 (579)
T PLN03102 13 PLTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAV 90 (579)
T ss_pred cccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcE
Confidence 367999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC---------CcEEeccCCccccccccccCcccchhhHHhh
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL---------PAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
++|++|.++.+++.++++.++++++|+++...+.+..... ...++..+...... .......++.++..
T Consensus 91 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 167 (579)
T PLN03102 91 LNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK---RPSSEELDYECLIQ 167 (579)
T ss_pred EeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc---CCcccccCHHHHHh
Confidence 9999999999999999999999999998876654443210 11111111100000 00111234444443
Q ss_pred hcCCCCCCC---CCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHH
Q 013780 177 LSGSVTDIP---DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVI 253 (436)
Q Consensus 177 ~~~~~~~~~---~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 253 (436)
......... .....++++++|+|||||||.||+|+++|.++............+ ...+++++.+|++|..++. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~~l~~~pl~h~~g~~-~ 244 (579)
T PLN03102 168 RGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEM--GTCPVYLWTLPMFHCNGWT-F 244 (579)
T ss_pred ccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCC--CCCCeEEecCChhhhcchh-H
Confidence 322111100 112356899999999999999999999999976544332222222 2237889999999999986 5
Q ss_pred HHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhC
Q 013780 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNI 333 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~ 333 (436)
.+.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++.+.+++++ +
T Consensus 245 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~ 323 (579)
T PLN03102 245 TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L 323 (579)
T ss_pred HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c
Confidence 667888899998888889999999999999999999999999998875444444567888999999999999999876 5
Q ss_pred CCCeeeeccccccccCCcccccCCCC------C------ccCcCccccccCCcEEEEEeCCCCccCCC--CCceEEEEec
Q 013780 334 PGATIFQVGYGMTETCAPISLENPLV------G------VRRSGSAGTLVAGVEAQIVSVDTLKPLPP--NQLGEIWVRG 399 (436)
Q Consensus 334 ~~~~i~~~~YG~tE~~~~~~~~~~~~------~------~~~~~~~G~p~~~~~v~i~d~~~~~~~~~--g~~Gel~v~g 399 (436)
+ .++++ .||+||+++.++...... . ....+..+.+++ .++++|.+++++++. ++.|||+++|
T Consensus 324 g-~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g 399 (579)
T PLN03102 324 G-FQVMH-AYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKG 399 (579)
T ss_pred C-CeEEe-ecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEEC
Confidence 5 89999 999999986544321110 0 012233344444 456667667777775 3689999999
Q ss_pred CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 400 PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 400 ~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.++.| ||++|+.+.+.| .+|||+|||+|+
T Consensus 400 ~~~~~G--Y~~~~~~t~~~f----~~gw~~TGDlg~ 429 (579)
T PLN03102 400 SSIMKG--YLKNPKATSEAF----KHGWLNTGDVGV 429 (579)
T ss_pred cchhhh--hcCChhhhHhhh----ccCceecCceEE
Confidence 999999 999999999988 578999999874
No 75
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=7.5e-49 Score=401.66 Aligned_cols=404 Identities=19% Similarity=0.211 Sum_probs=302.4
Q ss_pred CcCCCCCCCchHHHHh-hhcccCCCceEEEeCCCC------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc
Q 013780 19 LVLPSDPSFSMVHFLF-RNSASYSSKLALIDADSD------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH 91 (436)
Q Consensus 19 ~~~~~~~~~ti~~~l~-~~~~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~ 91 (436)
.|+++. ..|+.+.+. +.++++|+++|+++.+.+ +.+||+||.+++.++|+.|+++|+++||+|+++++|+++
T Consensus 167 ~wf~g~-~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e 245 (728)
T PLN03052 167 QWLPGA-VLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH 245 (728)
T ss_pred EECCCC-EeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 455543 378877655 444678999999976432 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH---------HHhhcC-CCcEEeccCCccccccc
Q 013780 92 FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD---------KVKDLN-LPAVLLGSKDKVSSSGL 161 (436)
Q Consensus 92 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~ 161 (436)
+++++|||+++|++++|++|.++.+++.+++++++++++|+++.... .+.... ...+++.........
T Consensus 246 ~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~-- 323 (728)
T PLN03052 246 AVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRV-- 323 (728)
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccc--
Confidence 99999999999999999999999999999999999999999875421 221111 122222111100000
Q ss_pred cccCcccchhhHHhhhcCCC---CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEE
Q 013780 162 ISRSSKIVSFHDLIELSGSV---TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVV 238 (436)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~ 238 (436)
........|++++...... ..........+++++|+|||||||.||||+++|.+++...........+ ..+|++
T Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l--~~~d~~ 400 (728)
T PLN03052 324 -KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDI--RKGDIV 400 (728)
T ss_pred -ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCC--CCCcEE
Confidence 0011234566665432110 1112222356899999999999999999999999987665443333333 233999
Q ss_pred EechhHHHHHHHHHHHHhhccCCcEEEEcCC-CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEec
Q 013780 239 LCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSG 317 (436)
Q Consensus 239 ~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (436)
++..|+.|+++.+ .++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|.+.......++++||.+++|
T Consensus 401 ~~~~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 401 CWPTNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EECCCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 9999999999985 67899999999999863 456789999999999999999999999988765566788999999999
Q ss_pred CCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCC--ceEE
Q 013780 318 AAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ--LGEI 395 (436)
Q Consensus 318 g~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~--~Gel 395 (436)
|++++++...++.+.++..++++ .||+||+++.+....+.. ..+++++|.|.+|++++|+| ++|++++.|+ .|||
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~-~yG~TE~~~~~~~~~~~~-~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL 556 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIE-YCGGTELGGGFVTGSLLQ-PQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGEL 556 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEe-eccChhhCcccccCCCCC-CCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEE
Confidence 99999999999888876567888 999999986544332221 34678899999999999999 5899999885 5999
Q ss_pred EEecCC--cccCccccCChhhhhhhcc---ccccCCeeecCCCCC
Q 013780 396 WVRGPN--VTPGIVYINFFVFTLFLWG---CEHTDSFIRGKDQQT 435 (436)
Q Consensus 396 ~v~g~~--~~~g~~Y~~~~~~~~~~~~---~~~~~~~~~tgD~~~ 435 (436)
+++++. ...+ |++++. ....|. .+....|++|||+++
T Consensus 557 ~v~~~~~~~~~~--~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~ 598 (728)
T PLN03052 557 ALFPLMFGASST--LLNADH-YKVYFKGMPVFNGKILRRHGDIFE 598 (728)
T ss_pred EEeCCCCCCCcc--ccCchh-hhhhhhcCCCCCCCEEEecCceEE
Confidence 998653 3346 676542 222221 011234899999864
No 76
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.5e-49 Score=409.81 Aligned_cols=383 Identities=22% Similarity=0.307 Sum_probs=296.7
Q ss_pred CCCchHHHHhhhcccCCC-ceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 25 PSFSMVHFLFRNSASYSS-KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
+..|+.+.|.+.++++|+ ++|+.+. ..+.+||+||.++++++|+.|.+. +++||+|+|+++|++++++++|||+++|
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G 279 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRR 279 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcC
Confidence 347899999999999998 6787653 247899999999999999999887 5999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhh--cC---CC-cEEeccCCccccccccccCcccchhhHH--h
Q 013780 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD--LN---LP-AVLLGSKDKVSSSGLISRSSKIVSFHDL--I 175 (436)
Q Consensus 104 ~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~--~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 175 (436)
++++|+++.++.+++.+++++++++++|++.+..+.... .. .. ..+...+ . .....+.+. .
T Consensus 280 ~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~----------~~~~~~~~~~~~ 348 (718)
T PRK08043 280 RIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLED-L----------KDDVTTADKLWI 348 (718)
T ss_pred CcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhh-h----------hhhcchhHHHHH
Confidence 999999999999999999999999999998776543111 10 00 1111111 0 000001100 0
Q ss_pred hhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHH
Q 013780 176 ELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILY 255 (436)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 255 (436)
...............++++++++|||||||.||+|++||+++..++........+.. +|++++.+|++|.+++...++
T Consensus 349 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~--~d~~l~~~Pl~h~~g~~~~~~ 426 (718)
T PRK08043 349 FAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTP--NDRFMSALPLFHSFGLTVGLF 426 (718)
T ss_pred HHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCc--cCeEEEcCcchhhhhhHHHHH
Confidence 000000111112346789999999999999999999999999988766555444433 399999999999999977788
Q ss_pred hhccCCcEEEEcCC-CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCC
Q 013780 256 DQLQKGNCVVSMGK-FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIP 334 (436)
Q Consensus 256 ~~l~~G~~v~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~ 334 (436)
.++..|+++++.+. +++..+++.++++++|+++++|+++..+.+.. ...++++||.+++||+++++++.+.|++.++
T Consensus 427 ~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g 504 (718)
T PRK08043 427 TPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKFG 504 (718)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHcC
Confidence 99999999998864 67788899999999999999999998876642 2346789999999999999999999999997
Q ss_pred CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccC--Ch
Q 013780 335 GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYIN--FF 412 (436)
Q Consensus 335 ~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~--~~ 412 (436)
+++++ .||+||++++++...+. ..+++++|+|+|+++++|+|. ++. ++.|||+++|++++.| ||+ ++
T Consensus 505 -~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~G--Y~~~e~~ 573 (718)
T PRK08043 505 -LRILE-GYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNG--YLRVEKP 573 (718)
T ss_pred -CCeec-ccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCcccc--ccCCCCc
Confidence 89999 99999998776654433 456789999999999999985 432 4669999999999999 998 44
Q ss_pred hhhhhhc----cccccCCeeecCCCCC
Q 013780 413 VFTLFLW----GCEHTDSFIRGKDQQT 435 (436)
Q Consensus 413 ~~~~~~~----~~~~~~~~~~tgD~~~ 435 (436)
+.+...+ ..+..+|||+|||+|+
T Consensus 574 ~~~~~~~~~~~~~~~~~gw~~TGDlg~ 600 (718)
T PRK08043 574 GVLEVPTAENARGEMERGWYDTGDIVR 600 (718)
T ss_pred ccccccccccccccccCCeEecCCEEE
Confidence 4221110 0112468999999874
No 77
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-49 Score=393.88 Aligned_cols=391 Identities=21% Similarity=0.281 Sum_probs=308.0
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.+++.++|.+.++.+|+++|+++. ++.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~ 86 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGAT 86 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcE
Confidence 378999999999999999999965 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchH-----HHHhhcC------CCcEEeccCCccccccccccCcccchhhHH
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELW-----DKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDL 174 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (436)
++|+++..+.+++.++++.++++++|+++... +.+.... .+.++...+... .. .......+...
T Consensus 87 ~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~ 161 (540)
T PRK06164 87 VIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAAD-AT----PAPAPGARVQL 161 (540)
T ss_pred EEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcc-cC----CCCCccccccc
Confidence 99999999999999999999999999986542 2222111 111211111000 00 00000000000
Q ss_pred hhhcCCC--CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHH
Q 013780 175 IELSGSV--TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (436)
Q Consensus 175 ~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 252 (436)
....... ..........+++++++|||||||.||+|+++|+++..+.......+.+. .++++++.+|++|.+|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~~~~l~~~p~~~~~g~~- 238 (540)
T PRK06164 162 FALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYD--PGAVLLAALPFCGVFGFS- 238 (540)
T ss_pred ccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCC--CCCEEEEcCCchhHHHHH-
Confidence 1000000 00011233568899999999999999999999999998877766666554 339999999999999996
Q ss_pred HHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecC-CCCcHHHHHHHHh
Q 013780 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA-APLGKELMEDCQK 331 (436)
Q Consensus 253 ~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg-~~l~~~~~~~~~~ 331 (436)
.++.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+.. .....++++|.+.++| .+...++.+++.+
T Consensus 239 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (540)
T PRK06164 239 TLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARA 317 (540)
T ss_pred HHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhh
Confidence 7899999999999999999999999999999999999999999998873 3445788999887765 5666777777776
Q ss_pred hCCCCeeeeccccccccCCcccccCCCCC-ccCcCcccccc-CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCcccc
Q 013780 332 NIPGATIFQVGYGMTETCAPISLENPLVG-VRRSGSAGTLV-AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYI 409 (436)
Q Consensus 332 ~~~~~~i~~~~YG~tE~~~~~~~~~~~~~-~~~~~~~G~p~-~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~ 409 (436)
. ++++++ .||+||++.+++....... ..+..+.|.|+ ++++++|+|++++.+++.|+.|||+++|++++.| ||
T Consensus 318 ~--~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~g--Y~ 392 (540)
T PRK06164 318 R--GVPLTG-LYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRG--YL 392 (540)
T ss_pred c--CCceec-ceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEeccccccc--cc
Confidence 5 499999 9999999876655433211 23345678876 8999999998899999999999999999999999 99
Q ss_pred CChhhhhhhccccccCCeeecCCCCC
Q 013780 410 NFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++|+.+.+.| ..++||+|||+|+
T Consensus 393 ~~~~~t~~~~---~~~~~~~TGDl~~ 415 (540)
T PRK06164 393 DNPDATARAL---TDDGYFRTGDLGY 415 (540)
T ss_pred CCchhhhhcc---cCCCceecCCeEE
Confidence 9999998877 3578999999864
No 78
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.3e-48 Score=391.62 Aligned_cols=395 Identities=30% Similarity=0.463 Sum_probs=312.5
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
-|+.++|.+.++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 21 ~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 21 GTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 47999999999999999999886 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccch--HHHHhhc----CCCcEEeccCCcccccc----ccccCcccchhhHHhh
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPEL--WDKVKDL----NLPAVLLGSKDKVSSSG----LISRSSKIVSFHDLIE 176 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 176 (436)
++++|..+.+++.++++.++++++++++.. ...+... ....+++.......... ..........+.+++.
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999999998631 1111111 11122222111000000 0001122344555554
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc----cCCCCcEEEechhHHHHHHHHH
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL----VGELDHVVLCVLPMFHVFGLSV 252 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~ 252 (436)
... .........++++++++|||||||.||+|+++|+++....... ..... .....+++++..|++|.+++..
T Consensus 179 ~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 255 (541)
T TIGR03205 179 GAA--APAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTV 255 (541)
T ss_pred cCC--CCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHH
Confidence 322 1222234567899999999999999999999999987643321 11111 1112278999999999999887
Q ss_pred HHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhh
Q 013780 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKN 332 (436)
Q Consensus 253 ~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~ 332 (436)
.++.++..|+++++...+++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+++.+.
T Consensus 256 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~ 335 (541)
T TIGR03205 256 ILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFFERK 335 (541)
T ss_pred HHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHHHHH
Confidence 78899999999999988899999999999999999999999999987654445567899999999999999999999998
Q ss_pred CCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEe-CCCCccCCCCCceEEEEecCCcccCccccCC
Q 013780 333 IPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVS-VDTLKPLPPNQLGEIWVRGPNVTPGIVYINF 411 (436)
Q Consensus 333 ~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d-~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~ 411 (436)
++ .++++ .||+||++..++...... ...++++|.|+++++++|.+ .+++++++.|+.|||+++|+.++.| |+++
T Consensus 336 ~~-~~~~~-~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~g--y~~~ 410 (541)
T TIGR03205 336 TG-LKLKS-GWGMTETCSPGTGHPPEG-PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRG--YWNR 410 (541)
T ss_pred hC-CCeec-ccccccCCcccccCCCCC-CCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCcccc--ccCC
Confidence 86 99999 999999987666543321 34567899999999998864 2578899999999999999999999 9999
Q ss_pred hhhhhhhccccccCCeeecCCCCC
Q 013780 412 FVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+.+.+.| .++||+|||+++
T Consensus 411 ~~~~~~~~----~~~~~~TGD~~~ 430 (541)
T TIGR03205 411 PEESAEAF----VGDRFLTGDIGY 430 (541)
T ss_pred hhhhHhhh----ccCCcccCceEE
Confidence 99998887 467889998753
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-48 Score=391.37 Aligned_cols=372 Identities=17% Similarity=0.192 Sum_probs=296.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.|+.++|.+++ .|+++|+++. +..+||.||.++++++|+.|.+.|+ .+||+|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 56888888764 6999999986 6899999999999999999999999 79999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-CcEEeccCCccccccccccCcccchhhHHhhhcCCCCCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDI 184 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (436)
++|++|.++.+++.++++.++++++|+++...+.+..... ...++..+. ..+.+++.... ...
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~--------------~~~~~~~~~~~--~~~ 142 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDT--------------PAYAELVAAAG--ALT 142 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccc--------------hhhhhhhcccc--CcC
Confidence 9999999999999999999999999999877665544321 111111110 11223322111 111
Q ss_pred CCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEE
Q 013780 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (436)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v 264 (436)
+.....++++++++|||||||.||+|.++|+++............+.. +|+++..+|++|..++...++.++..|+++
T Consensus 143 ~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~ 220 (540)
T PRK13388 143 PHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTR--DDVCYVSMPLFHSNAVMAGWAPAVASGAAV 220 (540)
T ss_pred CCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCC--CCEEEEeeCchhhcchHHHHHHHHHcCcEE
Confidence 122356789999999999999999999999999887766555554433 399999999999999876677789999999
Q ss_pred EEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 265 VSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
++.+.+++..+++.++++++|++..+|..+..+.+..........+++.+ + |++++++..+.+.+.++ .++++ .||
T Consensus 221 v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~~-~~l~~-~YG 296 (540)
T PRK13388 221 ALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRFG-CQVED-GYG 296 (540)
T ss_pred EECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHhC-Cceec-ccc
Confidence 99988999999999999999999999999999887654333334567744 3 56778888999999986 99999 999
Q ss_pred ccccCCcccccCCCCCccCcCccccccCCcEEE-----------EEeCCCCccC-CCCCceEEEEe-cCCcccCccccCC
Q 013780 345 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQ-----------IVSVDTLKPL-PPNQLGEIWVR-GPNVTPGIVYINF 411 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~-----------i~d~~~~~~~-~~g~~Gel~v~-g~~~~~g~~Y~~~ 411 (436)
+||++.++.... ....+++|+|++++++. ++| ++|+.+ +.++.|||+++ |+.++.| |+++
T Consensus 297 ~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~g--Y~~~ 369 (540)
T PRK13388 297 SSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEG--YYNN 369 (540)
T ss_pred cccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCccccc--ccCC
Confidence 999987655321 24568999999997652 344 345554 34678999998 9999999 9999
Q ss_pred hhhhhhhccccccCCeeecCCCCC
Q 013780 412 FVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+.+.+.| .+|||+|||+|+
T Consensus 370 ~~~t~~~~----~~g~~~TGD~~~ 389 (540)
T PRK13388 370 PEATAERM----RHGMYWSGDLAY 389 (540)
T ss_pred hHHHHHHh----hcCceeccceEE
Confidence 99999887 467999999764
No 80
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.1e-49 Score=397.58 Aligned_cols=372 Identities=16% Similarity=0.223 Sum_probs=284.7
Q ss_pred Cc-hHHHHhhhcccCCCceEEEeCCCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 27 FS-MVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 27 ~t-i~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
|| +.+.|.+.++++|+++|+++.+++ +++||+||.++++++|+.|.++ ++||+|+|+++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 45 888999999999999999988544 7899999999999999999987 799999999999999999999999999
Q ss_pred CeEeecCCC-------CCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhh
Q 013780 104 AIASTANPV-------YTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIE 176 (436)
Q Consensus 104 ~~~v~l~~~-------~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
+++++++.. ...+++.++++.++++++|+++.....+...... +.+ . .+.....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~--~----------------~~~~~~~ 139 (525)
T PRK05851 79 AAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-VTV--H----------------DLATAAH 139 (525)
T ss_pred CCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-ccc--c----------------ccccccc
Confidence 986544311 1234556778999999999988765554432111 000 0 0000000
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHh
Q 013780 177 LSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (436)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 256 (436)
.. .........++++++|+|||||||.||+|+++|+++..++........+. ..+|++++.+|++|.+++. .++.
T Consensus 140 ~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~-~~~~ 214 (525)
T PRK05851 140 TN---RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLD-AATDVGCSWLPLYHDMGLA-FLLT 214 (525)
T ss_pred cc---ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCC-CCCCeEEEcCCCccCccHH-HHHH
Confidence 00 00011123578999999999999999999999999998887766555543 1339999999999999996 6789
Q ss_pred hccCCcEEEEcCC--C--CHHHHHHHHHHhcceEEEecHHHHHHHHhccc-cCccCCCcceEEEecCCCCcHHHHHHHHh
Q 013780 257 QLQKGNCVVSMGK--F--DIEMALRAIEKYRVTVWWVVPPIILALAKNSL-VRKFDISSLKLVGSGAAPLGKELMEDCQK 331 (436)
Q Consensus 257 ~l~~G~~v~~~~~--~--~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~-~~~~~l~~lr~i~~gg~~l~~~~~~~~~~ 331 (436)
++..|+++++.+. + ++..+++.++++++|++..+|.++..+.+... ....++++||.+++||+++++++.++|.+
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~ 294 (525)
T PRK05851 215 AALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFAT 294 (525)
T ss_pred HHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHH
Confidence 9999999999862 4 57889999999999988665555555544322 23446789999999999999999999987
Q ss_pred h---CC--CCeeeeccccccccCCcccccCCCC-------------CccCcCccccccCCcEEEEEeCCCCccCCCCCce
Q 013780 332 N---IP--GATIFQVGYGMTETCAPISLENPLV-------------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLG 393 (436)
Q Consensus 332 ~---~~--~~~i~~~~YG~tE~~~~~~~~~~~~-------------~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~G 393 (436)
. ++ ...+++ .||+||++..++...+.. ...+.+++|+|+++++++|+|++.+.+++.|+.|
T Consensus 295 ~~~~~g~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~G 373 (525)
T PRK05851 295 AMAPFGFDAGAAAP-SYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIG 373 (525)
T ss_pred HHhhcCCChhhccc-ccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeE
Confidence 5 33 235888 999999976655432210 0124568999999999999997555678999999
Q ss_pred EEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 394 EIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 394 el~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
||+++|++++.| ||++|+.+ .++||+|||+|+
T Consensus 374 El~v~g~~~~~G--Y~~~~~~~--------~~~~~~TGDl~~ 405 (525)
T PRK05851 374 EIEIRGASMMSG--YLGQAPID--------PDDWFPTGDLGY 405 (525)
T ss_pred EEEEecCchhhc--cccCCccC--------CCCceeccceEE
Confidence 999999999999 99988642 367999999864
No 81
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=3.7e-49 Score=433.15 Aligned_cols=376 Identities=20% Similarity=0.280 Sum_probs=312.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|+++++++++++++||+++|+++
T Consensus 458 ~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 458 TTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|++|.++.+++.++++.+++++++++......+..... ..... +....... .....
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~-------------------~~~~~~~~---~~~~~ 592 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPD-LTSLC-------------------YNAPLAPQ---GAAPL 592 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCC-ceeee-------------------cccccccc---cCCCC
Confidence 999999999999999999999999999876554433210 00100 10000000 11111
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++|+|||||||.||||+++|+++.+..........+... +++++..|++|..++. .++.+|..|+++++
T Consensus 593 ~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~--d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~~ 669 (1296)
T PRK10252 593 QLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAD--DVVLQKTPCSFDVSVW-EFFWPFIAGAKLVM 669 (1296)
T ss_pred CCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCC--CEEEEeCCcchhhhHH-HHHHHHhCCCEEEE
Confidence 22357899999999999999999999999999887776666555433 9999999999998885 78899999999999
Q ss_pred cC---CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCc--cCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 267 MG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 267 ~~---~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
.+ ..++..+++.++++++|++.++|+++..+.+...... ..++++|.+++||+++++++.+.|++.++ .++++
T Consensus 670 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~-~~l~n- 747 (1296)
T PRK10252 670 AEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTG-APLHN- 747 (1296)
T ss_pred CChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCC-CEEEe-
Confidence 85 3589999999999999999999999999887643322 34689999999999999999999999886 89999
Q ss_pred cccccccCCcccccCCCCC-----ccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhh
Q 013780 342 GYGMTETCAPISLENPLVG-----VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTL 416 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~-----~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~ 416 (436)
.||+||++..++....... .....++|+|+++++++|+| +.+++++.|+.|||+|+|+.++.| |+++|+.|.
T Consensus 748 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~G--Y~~~~~~t~ 824 (1296)
T PRK10252 748 LYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQG--YLGRPDLTA 824 (1296)
T ss_pred CCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchh--hCCCcccch
Confidence 9999999876554332211 23456899999999999999 589999999999999999999999 999999999
Q ss_pred hhcc---ccccCCeeecCCCCC
Q 013780 417 FLWG---CEHTDSFIRGKDQQT 435 (436)
Q Consensus 417 ~~~~---~~~~~~~~~tgD~~~ 435 (436)
+.|. +...++||+|||+|+
T Consensus 825 ~~f~~~~~~~~~~~y~TGDl~~ 846 (1296)
T PRK10252 825 SRFIADPFAPGERMYRTGDVAR 846 (1296)
T ss_pred hhcccCCCCCCCEEEecCceEE
Confidence 9882 223456999999874
No 82
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.6e-49 Score=390.77 Aligned_cols=367 Identities=19% Similarity=0.246 Sum_probs=297.3
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.|+.+.|.++++.+|+++|+++. +..+||.||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 78999999999999999999976 5799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|+++.++.+++.+++++++++.+++++...+.+.........+... ... . . . . ..
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~--~-~--~--~~ 168 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPA----------------TAG-A--E-E--S--GG 168 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccc----------------hhh-h--h-c--C--CC
Confidence 99999999999999999999999999987776655443222211100 000 0 0 0 0 00
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhh--hhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAAS--LMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCV 264 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v 264 (436)
.....++.++++|||||||.||+|+++|....... ........+ ..++++++.+|++|.+++. .++.++..|+++
T Consensus 169 ~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~ 245 (516)
T PRK13383 169 RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRL--RTGSRISVAMPMFHGLGLG-MLMLTIALGGTV 245 (516)
T ss_pred CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhcc--CCCCeEEEecCCcchhhHH-HHHHHHhcCCEE
Confidence 01123466799999999999999999997432221 111112222 2238999999999999996 677889999999
Q ss_pred EEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 265 VSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 265 ~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
++...+++..+++.++++++|.+.++|.++..|.+.... ....++++|.+++||+++++++.++|.+.++ ..+++ .
T Consensus 246 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v~~-~ 323 (516)
T PRK13383 246 LTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG-DILYN-G 323 (516)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC-chhhh-c
Confidence 999889999999999999999999999999999875432 1235789999999999999999999999997 88999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcccc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCE 422 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~ 422 (436)
||+||++..+...... .....+++|+|+|+++++|+|+ +++++++|+.|||+++|+.++.| |++++.. .+
T Consensus 324 YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~g~~~~~~--Y~~~~~~---~~--- 393 (516)
T PRK13383 324 YGSTEVGIGALATPAD-LRDAPETVGKPVAGCPVRILDR-NNRPVGPRVTGRIFVGGELAGTR--YTDGGGK---AV--- 393 (516)
T ss_pred ccccccccceeccccc-cccCCCcccCCCCCcEEEEECC-CCCCCCCCCceEEEEecCccccc--ccCCchh---he---
Confidence 9999998655443322 1445789999999999999995 88999999999999999999999 9987642 12
Q ss_pred ccCCeeecCCCCC
Q 013780 423 HTDSFIRGKDQQT 435 (436)
Q Consensus 423 ~~~~~~~tgD~~~ 435 (436)
.+||++|||+|+
T Consensus 394 -~~g~~~TGDl~~ 405 (516)
T PRK13383 394 -VDGMTSTGDMGY 405 (516)
T ss_pred -ecCceecceeEE
Confidence 367999999763
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-48 Score=386.85 Aligned_cols=372 Identities=19% Similarity=0.215 Sum_probs=303.1
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.++.++|.+.+. ++++++++. ++.+||.||.++++++|++|.++ |++++++|+++++|+++++++++||+++|++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 578999988875 789999886 68999999999999999999986 8999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (436)
++|+++.++.+++.+++++++++++|+++.....+........++..+. ..+.+++..... ....
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~~~-~~~~ 145 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDS--------------PAWADELAAHRD-AEPP 145 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEecc--------------ccHHHHhcccCC-CCCC
Confidence 9999999999999999999999999999877765544321112211110 123333322111 1122
Q ss_pred CCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEE
Q 013780 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (436)
Q Consensus 186 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~ 265 (436)
.....++++++++|||||||.||+|+++|+++..+.......+.+.. .|++++.+|++|.+++...++.++..|++++
T Consensus 146 ~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 223 (529)
T PRK07867 146 FRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGP--DDVCYVSMPLFHSNAVMAGWAVALAAGASIA 223 (529)
T ss_pred cccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCc--ccEEEEecchhHHHHHHHHHHHHHhcCceEE
Confidence 33456789999999999999999999999999887776655555433 3999999999999999877888999999999
Q ss_pred EcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccc
Q 013780 266 SMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGM 345 (436)
Q Consensus 266 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~ 345 (436)
+.+++++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.++ .++++ .||+
T Consensus 224 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~-~YG~ 299 (529)
T PRK07867 224 LRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRFG-CVVVD-GFGS 299 (529)
T ss_pred ecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHhC-CcEEE-eecc
Confidence 998899999999999999999999999999888765433334467885 46888887764 67777886 89999 9999
Q ss_pred cccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCC------------ceEEEE-ecCCcccCccccCCh
Q 013780 346 TETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQ------------LGEIWV-RGPNVTPGIVYINFF 412 (436)
Q Consensus 346 tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~------------~Gel~v-~g~~~~~g~~Y~~~~ 412 (436)
||+++.+...+ ....+++|.|+++ ++++|++++..++.|+ .|||++ +|++++.| |+++|
T Consensus 300 TE~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~g--y~~~~ 371 (529)
T PRK07867 300 TEGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEG--YYNDP 371 (529)
T ss_pred cccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCccccc--ccCCh
Confidence 99976554322 2356789999999 7788877888899988 999999 99999999 99999
Q ss_pred hhhhhhccccccCCeeecCCCCC
Q 013780 413 VFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 413 ~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+.+.+.+ .++||+|||+++
T Consensus 372 ~~~~~~~----~~g~~~TGD~~~ 390 (529)
T PRK07867 372 EADAERM----RGGVYWSGDLAY 390 (529)
T ss_pred Hhhhhhh----cCCeEeeccEEE
Confidence 9998877 578999999763
No 84
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3e-48 Score=390.80 Aligned_cols=397 Identities=23% Similarity=0.376 Sum_probs=313.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.++.+.|.+.++++|+++|+++. ++.+||.||.+++.++|+.|. +.|+++||+|+++++|+++++++++||+++|++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 102 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLT 102 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 47899999999999999999986 789999999999999999996 689999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccC-Cccc--cc-------------cccccC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSK-DKVS--SS-------------GLISRS 165 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~-~~~~--~~-------------~~~~~~ 165 (436)
+++++|.++.+++.++++.++++++++++.....+.... ...++.... .... .. ......
T Consensus 103 ~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (560)
T PRK08751 103 VVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRI 182 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCC
Confidence 999999999999999999999999999987665544321 111221110 0000 00 000001
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccC---CCCcEEEech
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG---ELDHVVLCVL 242 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~ 242 (436)
.....+.+....... .........++++++++|||||||.||+|.++|.++..++........... ..++++++.+
T Consensus 183 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (560)
T PRK08751 183 NGAIRFREALALGRK-HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITAL 261 (560)
T ss_pred CccccHHHHHhccCC-CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEec
Confidence 111223333322211 112233456789999999999999999999999999877665433332211 1126788889
Q ss_pred hHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCC
Q 013780 243 PMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL 321 (436)
Q Consensus 243 p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l 321 (436)
|++|.+++....+.++..|+++++. .++++..+++.++++++|++.++|.++..+.+.......++++||.+++||+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~ 341 (560)
T PRK08751 262 PLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAV 341 (560)
T ss_pred ChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCCCC
Confidence 9999999865566777777776655 567899999999999999999999999999987665666788999999999999
Q ss_pred cHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCC
Q 013780 322 GKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPN 401 (436)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~ 401 (436)
++++.+.|++.++ +++++ .||+||+++.++..... .....+++|.|+++++++++| +++..++.|+.|||+++|+.
T Consensus 342 ~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~~~~ 417 (560)
T PRK08751 342 QRSVAERWKQVTG-LTLVE-AYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCIKGPQ 417 (560)
T ss_pred CHHHHHHHHHHhC-CeEEE-eeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCc
Confidence 9999999999886 89999 99999998766544322 134567899999999999999 58899999999999999999
Q ss_pred cccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 402 VTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 402 ~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++.| |+++|+.+.+.| +.++||+|||+|+
T Consensus 418 ~~~g--y~~~~~~~~~~~---~~~g~~~TGD~~~ 446 (560)
T PRK08751 418 VMKG--YWKRPEETAKVM---DADGWLHTGDIAR 446 (560)
T ss_pred cchh--hcCChhhhhhcc---ccCCCccccceEE
Confidence 9999 999999988766 3568999999863
No 85
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-48 Score=392.24 Aligned_cols=400 Identities=21% Similarity=0.284 Sum_probs=310.5
Q ss_pred CchHHHHhhhcccCCCceEEEeCC-CCccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD-SDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
+|+.++|.+.+..+|+++|+++.+ .++.+||.||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~ 89 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGA 89 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCC
Confidence 889999999999999999998653 24799999999999999999986 7999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCcccccc-ccccCcccchhhHHhhhc
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSG-LISRSSKIVSFHDLIELS 178 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 178 (436)
++++++|..+.+++.++++.++++++|+++...+.+.... .+.+++.......... .......+.++.++....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 90 VFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 9999999999999999999999999999987665543321 1222222111000000 000112344577776543
Q ss_pred CCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhc
Q 013780 179 GSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQL 258 (436)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 258 (436)
. .........++++++++|||||||.||+|.++|+++..+.........+.-..++++++.+|++|.+++. ..+.++
T Consensus 170 ~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~-~~~~~l 246 (576)
T PRK05620 170 S--TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWG-VPLAAF 246 (576)
T ss_pred C--CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhH-HHHHHH
Confidence 3 2222344567899999999999999999999999987654432222112222349999999999999986 678889
Q ss_pred cCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCe
Q 013780 259 QKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGAT 337 (436)
Q Consensus 259 ~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~ 337 (436)
..|+++++.+ .+++..+++.++++++|++.++|+++..++...........+||.+++||+++++++.++|.+.++ ++
T Consensus 247 ~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~-~~ 325 (576)
T PRK05620 247 MSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERYG-VD 325 (576)
T ss_pred hcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHhC-Cc
Confidence 9999999885 579999999999999999999999999887654333334568999999999999999999999987 89
Q ss_pred eeeccccccccCCcccccCCCCC------ccCcCccccccCCcEEEEEeCCCCccCC--CCCceEEEEecCCcccCcccc
Q 013780 338 IFQVGYGMTETCAPISLENPLVG------VRRSGSAGTLVAGVEAQIVSVDTLKPLP--PNQLGEIWVRGPNVTPGIVYI 409 (436)
Q Consensus 338 i~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~G~p~~~~~v~i~d~~~~~~~~--~g~~Gel~v~g~~~~~g~~Y~ 409 (436)
+++ .||+||++..+....+... .....++|++.++++++|+|+ +..++ .++.|||+++|+.++.| ||
T Consensus 326 ~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~g--Y~ 400 (576)
T PRK05620 326 VVH-VWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTAS--YY 400 (576)
T ss_pred eee-eccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--CccccCCCCCceEEEEEcCccccc--cc
Confidence 999 9999999876554332210 012347899999999999994 66554 47889999999999999 99
Q ss_pred CChhhh----hhhc---------cccccCCeeecCCCCC
Q 013780 410 NFFVFT----LFLW---------GCEHTDSFIRGKDQQT 435 (436)
Q Consensus 410 ~~~~~~----~~~~---------~~~~~~~~~~tgD~~~ 435 (436)
++++.+ ...| ..+..++||+|||+++
T Consensus 401 ~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~ 439 (576)
T PRK05620 401 HSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGS 439 (576)
T ss_pred CCccccccccccccccccchhhhcccccCCcEecCceEE
Confidence 999887 2222 1133568999999864
No 86
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.1e-49 Score=468.22 Aligned_cols=379 Identities=18% Similarity=0.235 Sum_probs=317.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 511 ~~~~~~~~~~a~~~p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~ 588 (5163)
T PRK12316 511 RGVHRLFEEQVERTPEAPALAFG--EETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAY 588 (5163)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEE
Confidence 67999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|++|.++.+++.++++++++++++++......+..... ..++..+. ......... .....
T Consensus 589 vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~----------------~~~~~~~~~--~~~~~ 649 (5163)
T PRK12316 589 VPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAG-VQVLDLDR----------------PAAWLEGYS--EENPG 649 (5163)
T ss_pred eccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccC-ceEEEecC----------------cchhhccCC--CCCCC
Confidence 999999999999999999999999998766544322211 11111110 000011111 11223
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++|+|||||||.||||+++|+++.+.+........+... +++++.+|++|..+++ .++.+|..|+++++
T Consensus 650 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~--d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~i 726 (5163)
T PRK12316 650 TELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVG--DTVLQKTPFSFDVSVW-EFFWPLMSGARLVV 726 (5163)
T ss_pred CCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCC--CEEEeeCCeehHHHHH-HHHHHHhCCCEEEE
Confidence 34567899999999999999999999999999988776666655433 9999999999999986 78999999999999
Q ss_pred cC---CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 267 MG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 267 ~~---~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
.+ .+++..+++.++++++|++.++|+++..|.+... ...+++||.+++||+++++++.++|.+.+++.++++ .|
T Consensus 727 ~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~Y 803 (5163)
T PRK12316 727 AAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYN-LY 803 (5163)
T ss_pred CCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEe-Cc
Confidence 85 3689999999999999999999999999987543 235789999999999999999999999888899999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc---
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG--- 420 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~--- 420 (436)
|+||++..++............++|+|++|++++|+|+ +++++|.|+.|||+|+|+.++.| |+++|+.|.+.|-
T Consensus 804 G~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~-~~~~~p~G~~GEl~i~G~~v~~G--Yl~~~~~t~~~f~~~~ 880 (5163)
T PRK12316 804 GPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDA-NLEPVPVGVLGELYLAGRGLARG--YHGRPGLTAERFVPSP 880 (5163)
T ss_pred CcChheeeeeEEecccccCCCCCCccccCCCEEEEECC-CCCCCCCCCceEEEecccccChh--hCCChhhhhhhCCCCC
Confidence 99999854443322222445678999999999999995 89999999999999999999999 9999999999882
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
+...++||+|||+|+
T Consensus 881 ~~~~~~~y~TGDl~~ 895 (5163)
T PRK12316 881 FVAGERMYRTGDLAR 895 (5163)
T ss_pred CCCCCeeEecCccEE
Confidence 223457999999974
No 87
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=5.6e-49 Score=433.36 Aligned_cols=392 Identities=19% Similarity=0.212 Sum_probs=306.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCC-------CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD-------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
.++.++|.++++++|+++|+++.. .++.+||+||.++++++|++|.+.|+++|++|+|+++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 579999999999999999998632 2478999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch---HHHHhhcC---------CCcEEeccCCccccccccccCcc
Q 013780 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL---WDKVKDLN---------LPAVLLGSKDKVSSSGLISRSSK 167 (436)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 167 (436)
+++|++++|++|.++.+++.++++.++++++++.... ...+.... .+.+.+..+.. ...+
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 387 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGS--------LVGG 387 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccc--------cccc
Confidence 9999999999999999999999999999999987542 11111100 00111100000 0000
Q ss_pred cchh--hHHhhhcCC-CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhH
Q 013780 168 IVSF--HDLIELSGS-VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPM 244 (436)
Q Consensus 168 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ 244 (436)
.... .+....... ..........++++++|+|||||||.||||+++|+++.+++........+.. .++++...|+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~--~d~~~~~~~~ 465 (1389)
T TIGR03443 388 SLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSE--NDKFTMLSGI 465 (1389)
T ss_pred ccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCC--CCEEEEecCc
Confidence 0000 000000000 0011122345789999999999999999999999999988776655555533 3899999999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEcCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCC
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL 321 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l 321 (436)
+|..++. .++.+|..|+++++++. .++..+++.++++++|+++++|++++.|.... ...+++||.+++||+++
T Consensus 466 ~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l 541 (1389)
T TIGR03443 466 AHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDIL 541 (1389)
T ss_pred eecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccC
Confidence 9988875 78999999999999854 36889999999999999999999999887543 23578999999999999
Q ss_pred cHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCC---------ccCcCccccccCCcEEEEEeCC-CCccCCCCC
Q 013780 322 GKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVG---------VRRSGSAGTLVAGVEAQIVSVD-TLKPLPPNQ 391 (436)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~G~p~~~~~v~i~d~~-~~~~~~~g~ 391 (436)
++...+++.+.+++.++++ .||+||++..++....... .....++|+|+++++++|+|++ .+++++.|+
T Consensus 542 ~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~ 620 (1389)
T TIGR03443 542 TKRDCLRLQTLAENVCIVN-MYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGE 620 (1389)
T ss_pred CHHHHHHHHHhCCCCEEEE-CccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCC
Confidence 9999999999888899999 9999999876554321100 1134678999999999999963 357899999
Q ss_pred ceEEEEecCCcccCccccCChhhhhhhc--ccc-----------------------ccCCeeecCCCCC
Q 013780 392 LGEIWVRGPNVTPGIVYINFFVFTLFLW--GCE-----------------------HTDSFIRGKDQQT 435 (436)
Q Consensus 392 ~Gel~v~g~~~~~g~~Y~~~~~~~~~~~--~~~-----------------------~~~~~~~tgD~~~ 435 (436)
+|||+|+|++++.| |+++|+.|.+.| .+| ..++||+|||+|+
T Consensus 621 ~GEL~i~G~~v~~G--Y~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~ 687 (1389)
T TIGR03443 621 VGEIYVRAGGLAEG--YLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGR 687 (1389)
T ss_pred ceEEEecccccchh--cCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCcee
Confidence 99999999999999 999999999988 222 2368999999984
No 88
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.5e-48 Score=386.83 Aligned_cols=378 Identities=19% Similarity=0.227 Sum_probs=310.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.+.|.+.++.+|+++++.+. +..+||.||.+++.++|..|.+.|+++|++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57899999999999999999986 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+++++.++.+++.++++..+++++++++..... ......+.. ..+.+...... .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----------------~~~~~~~~~~~--~~~~~ 137 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPLE----ILGIPVITL----------------DELKDIFATGN--PYDFD 137 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEeccccccc----ccCCcEEeh----------------HHhhhhhhccc--ccccc
Confidence 999999999999999999999999998765110 000011100 01111111011 11112
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++++|||||||.||+|.++|+++..+.........+.. .+++++..|++|..++. .++.++..|+++++
T Consensus 138 ~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~v~ 214 (503)
T PRK04813 138 HAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPE--GPQFLNQAPYSFDLSVM-DLYPTLASGGTLVA 214 (503)
T ss_pred ccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCc--CceeeecCCcchhHhHH-HHHHHHhcCCEEEE
Confidence 3346788999999999999999999999999987776555544433 38999999999998875 77889999999998
Q ss_pred cCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 267 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
.++ .++..+++.++++++|++.++|+++..+..........++++|.++++|+++++.+.+++.+.+++..+++ .|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~-~y 293 (503)
T PRK04813 215 LPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYN-TY 293 (503)
T ss_pred cChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEe-Cc
Confidence 864 58899999999999999999999998876655545567889999999999999999999999997799999 99
Q ss_pred cccccCCcccccCCCC---CccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc
Q 013780 344 GMTETCAPISLENPLV---GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 420 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~---~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~ 420 (436)
|+||++..++...... ......++|+|.++++++|+| +++..++.|+.|||+++|+.++.| ||++++.+...|-
T Consensus 294 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~~ 370 (503)
T PRK04813 294 GPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKG--YLNNPEKTAEAFF 370 (503)
T ss_pred ccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccc--cCCChhHhHHhhc
Confidence 9999976554322111 134556899999999999999 589999999999999999999999 9999999988764
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
..+..+||+|||+|+
T Consensus 371 ~~~g~~~~~tGD~~~ 385 (503)
T PRK04813 371 TFDGQPAYHTGDAGY 385 (503)
T ss_pred cCCCceeEECCceEE
Confidence 334456999999764
No 89
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-48 Score=389.08 Aligned_cols=389 Identities=20% Similarity=0.242 Sum_probs=304.9
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
.++.++|.+.++.+|++.++.+...+ +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 57899999999999999988764223 6899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHHhhhcC
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (436)
++++++|..+.+++..+++.+++++++++....+.+.+.. .+.++...+... .. .....+.+++++.....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~l~~~~~ 165 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAH--LP--AGSTPLLCYETLVGAQD 165 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCc--cc--cCCcccccHHHHhcccC
Confidence 9999999999999999999999999999987665544321 111122111110 00 01122455666554332
Q ss_pred CCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhcc
Q 013780 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (436)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 259 (436)
.........++++++++|||||||.||+|++||.++..+.........+....++++++..|++|.+++. ..+.++.
T Consensus 166 --~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~-~~~~~l~ 242 (539)
T PRK07008 166 --GDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWG-LPYSAPL 242 (539)
T ss_pred --CCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHH-HHHHHHh
Confidence 2222334567889999999999999999999999987543322111112112338999999999988774 5677889
Q ss_pred CCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCee
Q 013780 260 KGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (436)
Q Consensus 260 ~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i 338 (436)
.|+++++. +.+++..+++.++++++|++.++|+++..+.+.......+++++|.++++|+++++++.+++++.++ +++
T Consensus 243 ~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l 321 (539)
T PRK07008 243 TGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYG-VEV 321 (539)
T ss_pred cCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHhC-Cce
Confidence 99999987 4679999999999999999999999999999877666667899999999999999999999999997 999
Q ss_pred eeccccccccCCcccccCCCC---------CccCcCccccccCCcEEEEEeCCCCccCCCC--CceEEEEecCCcccCcc
Q 013780 339 FQVGYGMTETCAPISLENPLV---------GVRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGPNVTPGIV 407 (436)
Q Consensus 339 ~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g--~~Gel~v~g~~~~~g~~ 407 (436)
++ .||+||++..++...... ......++|+|+|+++++|+|+ ++.+++.+ +.|||+++|+.++.|
T Consensus 322 ~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~g-- 397 (539)
T PRK07008 322 IH-AWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDR-- 397 (539)
T ss_pred ec-ccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECC-CCCccCCCCCcceEEEEeCCccchh--
Confidence 99 999999987554332110 0112468999999999999995 78888754 579999999999999
Q ss_pred ccCChhhhhhhccccccCCeeecCCCC
Q 013780 408 YINFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 408 Y~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
|+++++. .+ .++||+|||+|
T Consensus 398 y~~~~~~---~~----~~g~~~TGD~~ 417 (539)
T PRK07008 398 YFRGDAS---PL----VDGWFPTGDVA 417 (539)
T ss_pred hcCChhh---hh----cCCCcccCceE
Confidence 9998842 22 25688888875
No 90
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=3.2e-48 Score=395.19 Aligned_cols=402 Identities=19% Similarity=0.208 Sum_probs=296.5
Q ss_pred CCcCCCCCCCchHHHHhhhcccCCCceEEEeCCC-C--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHH
Q 013780 18 PLVLPSDPSFSMVHFLFRNSASYSSKLALIDADS-D--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI 94 (436)
Q Consensus 18 ~~~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~ 94 (436)
..|+++ +..|+.+.+.++ .++++|+++.+. + +.+||+||.+++.++|+.|+++|+++||+|+++++|++++++
T Consensus 79 ~~wf~~-~~~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~ 154 (652)
T TIGR01217 79 AQWFPG-ARLNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV 154 (652)
T ss_pred CEECCC-CeeeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH
Confidence 356654 348888888764 468888877532 2 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHhhc----C-CCcEEeccCCcccccc
Q 013780 95 CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW---------DKVKDL----N-LPAVLLGSKDKVSSSG 160 (436)
Q Consensus 95 ~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~----~-~~~~~~~~~~~~~~~~ 160 (436)
++|||+++|++++|+++.++.+++.+++++++++++|+++... +.+.+. . .+.+++...... ...
T Consensus 155 ~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 233 (652)
T TIGR01217 155 AMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGP-RET 233 (652)
T ss_pred HHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCC-ccc
Confidence 9999999999999999999999999999999999999987531 222211 1 122222111000 000
Q ss_pred ccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhh-hhhHHhhhhccCCCCcEEE
Q 013780 161 LISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAA-SLMISAHQELVGELDHVVL 239 (436)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~ 239 (436)
......+...+++++..... ..........+++++|+|||||||.||||+++|++++.+ .........+ ..+|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~d~~~ 310 (652)
T TIGR01217 234 EAPKIDGALDLEDFTAAAQA-AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDL--GPGDRLF 310 (652)
T ss_pred ccccccCcccHHHHHhcccC-CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCC--CCCcEEE
Confidence 00001123456666543211 111223345689999999999999999999999987543 2222222333 2339999
Q ss_pred echhHHHHHHHHHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhcc--ccCccCCCcceE
Q 013780 240 CVLPMFHVFGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNS--LVRKFDISSLKL 313 (436)
Q Consensus 240 ~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~--~~~~~~l~~lr~ 313 (436)
+..|+.|+.+. .++.+|..|+++++.+. .++..+++.++++++|++..+|.++..+.+.. .....++++||.
T Consensus 311 ~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~ 388 (652)
T TIGR01217 311 YYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQC 388 (652)
T ss_pred EeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeE
Confidence 99999998643 45689999999999842 27889999999999999988888887776542 123457899999
Q ss_pred EEecCCCCcHHHHHHHHhhCC-CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCc
Q 013780 314 VGSGAAPLGKELMEDCQKNIP-GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQL 392 (436)
Q Consensus 314 i~~gg~~l~~~~~~~~~~~~~-~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~ 392 (436)
+++||+++++++.+++.+.++ +..+.+ .||+||+++......+. .....+++|.|.+|++++|+|+ +|+++ +|+.
T Consensus 389 i~~gGe~l~~~~~~~~~~~~~~~~~~~~-~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~ivd~-~g~~~-~g~~ 464 (652)
T TIGR01217 389 VASTGSPLPPDGFRWVYDEIKADVWLAS-ISGGTDICSCFAGANPT-LPVHIGEIQAPGLGTAVQSWDP-EGKPV-TGEV 464 (652)
T ss_pred EEeecCCCCHHHHHHHHHHhCCCceEEe-ccCHHHHhccccCCCCC-CCCcCCccCCCcCCCceEEECC-CCCCC-CCCc
Confidence 999999999999999999885 345667 89999975443332222 1345688999999999999995 78888 5999
Q ss_pred eEEEEecC--CcccCccccCChhhhhhhcccccc-CCeeecCCCCC
Q 013780 393 GEIWVRGP--NVTPGIVYINFFVFTLFLWGCEHT-DSFIRGKDQQT 435 (436)
Q Consensus 393 Gel~v~g~--~~~~g~~Y~~~~~~~~~~~~~~~~-~~~~~tgD~~~ 435 (436)
|||+++|+ .++.| ||++++.+.....++.+ +||++|||+|+
T Consensus 465 GEl~v~gp~p~~~~g--y~~~~~~t~~~~~~~~~~~g~~~tGDlg~ 508 (652)
T TIGR01217 465 GELVCTNPMPSMPIR--FWNDPDGSKYRDAYFDTYPGVWRHGDWIT 508 (652)
T ss_pred cEEEEecCCCccccc--eeCCCccchhHHhhhcCCCCEEEcCCcEE
Confidence 99999996 58999 99999866522222322 57889999874
No 91
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9.3e-49 Score=458.50 Aligned_cols=379 Identities=22% Similarity=0.287 Sum_probs=315.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|++++++++++++|||+++|+++
T Consensus 1574 ~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~ 1651 (3956)
T PRK12467 1574 RLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAY 1651 (3956)
T ss_pred ccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCcee
Confidence 67999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIP 185 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (436)
+|++|.++.+++.++++++++++++++......+.... .+.+.+. . ..+...... ....
T Consensus 1652 vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~--~~~~ 1711 (3956)
T PRK12467 1652 VPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLD-Q-----------------EDDWLEGYS--DSNP 1711 (3956)
T ss_pred eecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEec-c-----------------ccchhccCC--CCCC
Confidence 99999999999999999999999999877655443221 1111111 0 000111111 1122
Q ss_pred CCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEE
Q 013780 186 DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVV 265 (436)
Q Consensus 186 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~ 265 (436)
.....++++++|+|||||||.||||+++|+++.+.+........+.. .++++...|++|..+++ .++.+|..|++++
T Consensus 1712 ~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 1788 (3956)
T PRK12467 1712 AVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSA--ADVVLQFTSFAFDVSVW-ELFWPLINGARLV 1788 (3956)
T ss_pred CCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCc--ccEEEEecCccHHHHHH-HHHHHHhCCCEEE
Confidence 33456789999999999999999999999999988776655555433 39999999999999986 7899999999999
Q ss_pred EcCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 266 SMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 266 ~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
+.++ .++..+++.|+++++|++.++|+++..|.+... ....+++||.+++||+++++++.+.|.+.+++.++++ .
T Consensus 1789 i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n-~ 1866 (3956)
T PRK12467 1789 IAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFN-L 1866 (3956)
T ss_pred EcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEe-C
Confidence 9853 479999999999999999999999999987532 2345789999999999999999999999998788999 9
Q ss_pred ccccccCCcccccCCC---CCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhc
Q 013780 343 YGMTETCAPISLENPL---VGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW 419 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~---~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~ 419 (436)
||+||++..++..... .......++|+|+++++++|+| ++++++|.|.+|||+|+|+.++.| |+++|+.|.+.|
T Consensus 1867 YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~G--Yl~~p~~t~~~f 1943 (3956)
T PRK12467 1867 YGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARG--YLNRPALTAERF 1943 (3956)
T ss_pred ccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccccc--ccCChhhhhhhC
Confidence 9999998766543221 1123357899999999999999 589999999999999999999999 999999999988
Q ss_pred c--ccc--cCCeeecCCCCC
Q 013780 420 G--CEH--TDSFIRGKDQQT 435 (436)
Q Consensus 420 ~--~~~--~~~~~~tgD~~~ 435 (436)
. .+. .++||+|||+|+
T Consensus 1944 ~~~p~~~~~~r~yrTGDl~~ 1963 (3956)
T PRK12467 1944 VADPFGTVGSRLYRTGDLAR 1963 (3956)
T ss_pred cCCCCCCCCccceeccceEE
Confidence 2 121 346999999874
No 92
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.7e-48 Score=391.03 Aligned_cols=391 Identities=18% Similarity=0.227 Sum_probs=303.9
Q ss_pred CCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 013780 25 PSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGA 104 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 104 (436)
...|+.+.|.++++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 3488999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 105 IASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 105 ~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
+++++++.++.+++.++++.++++++|++++..+.+.... ....++..+.... .....+..+.+.....+.
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 187 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTL-----DDPEGYEDLAAAAAGAPT 187 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccc-----cccccHHHHhhhcccCCc
Confidence 9999999999999999999999999999987766554432 1111121111000 001122222222211111
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
...........+++++|+|||||||.||+|++||.++..++........+.. ++++++.+|++|.+++...++.++..
T Consensus 188 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~--~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 188 TNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTP--DDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred cCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCC--CcEEEEecCchhhhhHHHHHHHHHhc
Confidence 0111223346789999999999999999999999999998887666654433 39999999999999998778888999
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 261 G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
|+++++.+.+++..+++.++++++|++.++|+++..+.+..........++|.+ +|+.+++++.++|.+.|+...+++
T Consensus 266 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 266 GATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 999999999999999999999999999999999999888655444455677764 477899999999999998567899
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccC----CcEEE---------EEeCC-CCccCCCCCceEEE--EecCCccc
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVA----GVEAQ---------IVSVD-TLKPLPPNQLGEIW--VRGPNVTP 404 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~----~~~v~---------i~d~~-~~~~~~~g~~Gel~--v~g~~~~~ 404 (436)
.||+||++...... ...++++|.+.+ +..+. +.+.+ ....+++|+.|||+ ++|+.++.
T Consensus 344 -~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 -FYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFD 417 (600)
T ss_pred -eecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccc
Confidence 99999987543321 345567887665 33332 33321 11357889999998 78999999
Q ss_pred CccccCChhhhhhhcc---ccccCCeeecCCCCC
Q 013780 405 GIVYINFFVFTLFLWG---CEHTDSFIRGKDQQT 435 (436)
Q Consensus 405 g~~Y~~~~~~~~~~~~---~~~~~~~~~tgD~~~ 435 (436)
| | ++++.+.+.|- +...++||+|||+|+
T Consensus 418 G--Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~ 448 (600)
T PRK08279 418 G--Y-TDPEASEKKILRDVFKKGDAWFNTGDLMR 448 (600)
T ss_pred c--c-CCchhhHHHHhhcccCCCCceEeecceEE
Confidence 9 9 88888887661 123468999999974
No 93
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.7e-48 Score=462.91 Aligned_cols=379 Identities=20% Similarity=0.239 Sum_probs=314.5
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~ 2080 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFG--DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAY 2080 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEE
Confidence 58999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
||++|.++.+++.+++++++++++++++.....+..... ...+..+ .... ..... ...+.
T Consensus 2081 vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~----------------~~~~-~~~~~--~~~~~ 2140 (5163)
T PRK12316 2081 VPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAG-VARLPLD----------------RDAE-WADYP--DTAPA 2140 (5163)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccc-cceEecc----------------chhh-hhccC--ccCCC
Confidence 999999999999999999999999999876554322111 1111111 0000 00001 11123
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++|+|||||||.||||+++|+++.+.+........+... ++++...|++|..++. .++.+|..|+++++
T Consensus 2141 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~--d~~l~~~~~~fd~~~~-~~~~~L~~G~~~~~ 2217 (5163)
T PRK12316 2141 VQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPA--DCELQFMSFSFDGAHE-QWFHPLLNGARVLI 2217 (5163)
T ss_pred CCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCc--ceEEEecCchHHHHHH-HHHHHHhCCCEEEe
Confidence 34578999999999999999999999999999988876666655433 9999999999988875 89999999999988
Q ss_pred cC--CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 267 MG--KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 267 ~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
.+ .+++..+++.++++++|++.++|+++..|.+...... ..++||.+++||+++++++.++|.+.+++..+++ .||
T Consensus 2218 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG 2295 (5163)
T PRK12316 2218 RDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFN-GYG 2295 (5163)
T ss_pred CCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEE-Ccc
Confidence 75 3689999999999999999999999999987654333 3458999999999999999999999988899999 999
Q ss_pred ccccCCcccccCCCCCc---cCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc-
Q 013780 345 MTETCAPISLENPLVGV---RRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG- 420 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~~~---~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~- 420 (436)
+||++..++........ ....++|+|+++++++|+|+ +++++|.|++|||+|+|+.++.| |+++|+.|.+.|-
T Consensus 2296 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~-~~~~vp~g~~GEl~i~G~~v~~G--Y~~~p~~T~~~f~~ 2372 (5163)
T PRK12316 2296 PTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILDA-DLNLLAPGMAGELYLGGEGLARG--YLNRPGLTAERFVP 2372 (5163)
T ss_pred chhheeeeeeeecccccccCCCcCCcccccCCCEEEEECC-CCCCCCCCCeeEEEecchhhccc--ccCChhhhhhhccC
Confidence 99998765543322111 12358999999999999995 88999999999999999999999 9999999999982
Q ss_pred -ccc--cCCeeecCCCCC
Q 013780 421 -CEH--TDSFIRGKDQQT 435 (436)
Q Consensus 421 -~~~--~~~~~~tgD~~~ 435 (436)
-+. .++||+|||+|+
T Consensus 2373 ~~~~~~~~~~yrTGDl~~ 2390 (5163)
T PRK12316 2373 DPFSASGERLYRTGDLAR 2390 (5163)
T ss_pred CCCCCCCCeeEecccEEE
Confidence 121 357999999984
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-47 Score=385.34 Aligned_cols=396 Identities=28% Similarity=0.417 Sum_probs=311.9
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.++.++|.+.++++|+++|+++. +..+||.||.++++++|+.|. +.|+++|++|+++++|++++++++|||+++|++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 100 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMI 100 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 57999999999999999999986 789999999999999999998 489999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CCcEEeccCCcc-cc-cc-c-------------cccC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LPAVLLGSKDKV-SS-SG-L-------------ISRS 165 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~-~~-~~-~-------------~~~~ 165 (436)
++|++|.++.+++.++++.++++++++++...+.+.... ...++....... .. .. . ....
T Consensus 101 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08974 101 VVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL 180 (560)
T ss_pred EeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccC
Confidence 999999999999999999999999999876544433221 111111110000 00 00 0 0000
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhh-ccCCCCcEEEechhH
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE-LVGELDHVVLCVLPM 244 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~ 244 (436)
+....+.+....... ..........+++++++|||||||.||+|.++|.++..+......... .....++.++..+|+
T Consensus 181 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 259 (560)
T PRK08974 181 PDAISFRSALHKGRR-MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPL 259 (560)
T ss_pred CCcccHHHHhhccCC-CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcH
Confidence 011122222221111 111223346789999999999999999999999999876544322221 112223788899999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcH
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~ 323 (436)
+|.+++....+.++..|+++++. +..++..+++.++++++|++.++|+++..|.+........++++|.+++||+++++
T Consensus 260 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~ 339 (560)
T PRK08974 260 YHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAVQQ 339 (560)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccCCH
Confidence 99999876677788889887766 45688999999999999999999999999988766566678899999999999999
Q ss_pred HHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcc
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVT 403 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~ 403 (436)
.+.++|++.++ .++++ .||+||++..+....... ..+.+++|.|+|+++++|+|+ ++.+++.|+.|||+++|+.++
T Consensus 340 ~~~~~~~~~~g-~~~~~-~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~g~~~~ 415 (560)
T PRK08974 340 AVAERWVKLTG-QYLLE-GYGLTECSPLVSVNPYDL-DYYSGSIGLPVPSTEIKLVDD-DGNEVPPGEPGELWVKGPQVM 415 (560)
T ss_pred HHHHHHHHHhC-CcEEe-eecccccCceeeccCCCC-cccCCccccCcCCCEEEEECC-CCCCCCCCCceEEEEecCCcc
Confidence 99999999886 89999 999999987666543321 345789999999999999995 789999999999999999999
Q ss_pred cCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 404 PGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 404 ~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.| |+++++.+...| .++||+|||+++
T Consensus 416 ~g--y~~~~~~~~~~~----~~g~~~TGDl~~ 441 (560)
T PRK08974 416 LG--YWQRPEATDEVI----KDGWLATGDIAV 441 (560)
T ss_pred hh--hcCChhhhhhhh----hcCCcccCCEEE
Confidence 99 999999988877 578999999764
No 95
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.2e-47 Score=386.35 Aligned_cols=395 Identities=19% Similarity=0.277 Sum_probs=301.8
Q ss_pred CCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 26 SFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 26 ~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
++|+...+.+.+..+|+++|+++. +..+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 19 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 96 (567)
T PLN02479 19 ALTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAV 96 (567)
T ss_pred ccCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcE
Confidence 477899999999999999999986 678999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhc------------CCCcEEeccCCcc-ccccccccCcccchhh
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL------------NLPAVLLGSKDKV-SSSGLISRSSKIVSFH 172 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 172 (436)
++++++..+.+++.++++.++++++++++...+..... ..+.++...+... ..........+...+.
T Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
T PLN02479 97 VNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYE 176 (567)
T ss_pred EEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHH
Confidence 99999999999999999999999999998765433221 1112222211100 0000000112334556
Q ss_pred HHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHH
Q 013780 173 DLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (436)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 252 (436)
+++..... ..........++.++++|||||||.||+|++||+++...+......+.+. .++++++.+|++|.+++..
T Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~h~~~~~~ 253 (567)
T PLN02479 177 KFLETGDP-EFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMN--EGAVYLWTLPMFHCNGWCF 253 (567)
T ss_pred HHHhcccc-ccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCC--CCCEEEEecchhhhhhHHH
Confidence 65544321 11111122334677799999999999999999999876655443333332 3389999999999999865
Q ss_pred HHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCc-cCCCcceEEEecCCCCcHHHHHHHHh
Q 013780 253 ILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK-FDISSLKLVGSGAAPLGKELMEDCQK 331 (436)
Q Consensus 253 ~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~-~~l~~lr~i~~gg~~l~~~~~~~~~~ 331 (436)
.+...+..|.++++ ..+++..+++.++++++|++.++|+++..|.+...... ..++++|.++++|+++++.+.++|.+
T Consensus 254 ~~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~ 332 (567)
T PLN02479 254 TWTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSE 332 (567)
T ss_pred HHHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHh
Confidence 55556666666654 56899999999999999999999999999987654333 25789999999999999999999987
Q ss_pred hCCCCeeeeccccccccCCcccccC--C-------CCCccCcCccccccCCcE-EEEEeCCCCccCCCC--CceEEEEec
Q 013780 332 NIPGATIFQVGYGMTETCAPISLEN--P-------LVGVRRSGSAGTLVAGVE-AQIVSVDTLKPLPPN--QLGEIWVRG 399 (436)
Q Consensus 332 ~~~~~~i~~~~YG~tE~~~~~~~~~--~-------~~~~~~~~~~G~p~~~~~-v~i~d~~~~~~~~~g--~~Gel~v~g 399 (436)
. +.++++ .||+||+++.+.... + ........++|.+.++++ ++|+|++++.+++.+ +.|||+++|
T Consensus 333 ~--~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g 409 (567)
T PLN02479 333 K--GFRVTH-TYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRG 409 (567)
T ss_pred c--CCceec-ccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEec
Confidence 6 489999 999999865433211 0 000111245788888875 899997688888764 679999999
Q ss_pred CCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 400 PNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 400 ~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++++.| ||++|+.+.+.| .++||+|||+|+
T Consensus 410 ~~~~~G--Y~~~~~~t~~~~----~~g~~~TGDl~~ 439 (567)
T PLN02479 410 NMVMKG--YLKNPKANEEAF----ANGWFHSGDLGV 439 (567)
T ss_pred cchhhh--hhcCcccccchh----cCCceecceeEE
Confidence 999999 999999999988 478999999863
No 96
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-47 Score=383.04 Aligned_cols=393 Identities=21% Similarity=0.275 Sum_probs=305.1
Q ss_pred CCCCCCchHHHHhhhcccCCCceEEEeCCCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 22 PSDPSFSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 22 ~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
+.+.++|+.++|.++++++|++++++...++ +++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 5 MQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred hhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 3344589999999999999999999853223 78999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC-----CCcEEeccCCccccccccccCcccchhhHH
Q 013780 100 IAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN-----LPAVLLGSKDKVSSSGLISRSSKIVSFHDL 174 (436)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (436)
+++|+++++++|..+.+++..+++.+++++++++....+.+.+.. .+.++...+... .. .........+.++
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~ 161 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAH--MP-QTTLKNAVAYEEW 161 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccc--cc-ccCccccccHHHH
Confidence 999999999999999999999999999999999987665554321 122222211100 00 0111123345555
Q ss_pred hhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhh--HHhhhhccCCCCcEEEechhHHHHHHHHH
Q 013780 175 IELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLM--ISAHQELVGELDHVVLCVLPMFHVFGLSV 252 (436)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 252 (436)
+.... .........++++++++|||||||.||+|++||++.+..... ......+ ..+++++...|++|.+++.
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~p~~h~~~~~- 236 (542)
T PRK06018 162 IAEAD--GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGT--SAADTMLPVVPLFHANSWG- 236 (542)
T ss_pred hccCC--cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCC--CCCCEEEEecCHHHHhhhH-
Confidence 54432 222233456678999999999999999999999975322111 1122222 2338999999999999886
Q ss_pred HHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHh
Q 013780 253 ILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQK 331 (436)
Q Consensus 253 ~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~ 331 (436)
..+.++..|+++++.. .+++..+++.++++++|++.++|+++..|.+.......++++||.+++||+++++++.++|++
T Consensus 237 ~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~ 316 (542)
T PRK06018 237 IAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED 316 (542)
T ss_pred HHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH
Confidence 5567889999998874 678999999999999999999999999998877666667889999999999999999999999
Q ss_pred hCCCCeeeeccccccccCCcccccCCCC--C-------ccCcCccccccCCcEEEEEeCCCCccCCCC--CceEEEEecC
Q 013780 332 NIPGATIFQVGYGMTETCAPISLENPLV--G-------VRRSGSAGTLVAGVEAQIVSVDTLKPLPPN--QLGEIWVRGP 400 (436)
Q Consensus 332 ~~~~~~i~~~~YG~tE~~~~~~~~~~~~--~-------~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g--~~Gel~v~g~ 400 (436)
++ .++++ .||+||++.+.+...... . .....++|+|.++++++|+|+ +++.++.+ ..|||+++|+
T Consensus 317 -~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~-~~~~~~~~~~~~Gel~i~g~ 392 (542)
T PRK06018 317 -MG-VEVRH-AWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD-AGKELPWDGKTFGRLKVRGP 392 (542)
T ss_pred -hC-CCeEe-eecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC-CCCCCCCCCCceeEEEEecC
Confidence 75 99999 999999987655321110 0 112357899999999999995 78887753 6799999999
Q ss_pred CcccCccccCChhhhhhhccccccCCeeecCCCC
Q 013780 401 NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 401 ~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
+++.| ||++.. . .++.++||+|||++
T Consensus 393 ~~~~g--y~~~~~---~---~~~~~~~~~TGDl~ 418 (542)
T PRK06018 393 AVAAA--YYRVDG---E---ILDDDGFFDTGDVA 418 (542)
T ss_pred Ccchh--hhcCcc---c---EecCCcEEEcCCEE
Confidence 99999 998322 2 22357899999976
No 97
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-47 Score=380.44 Aligned_cols=376 Identities=22% Similarity=0.273 Sum_probs=290.8
Q ss_pred hhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC
Q 013780 34 FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY 113 (436)
Q Consensus 34 ~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 113 (436)
-.+++++|+++|+++.+++..+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 35667899999999865578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCc-EEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCC
Q 013780 114 TVSELSKQVKDSNPKLVITVPELWDKVKDLNLPA-VLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQT 192 (436)
Q Consensus 114 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (436)
+.+++.++++.++++++++++............. ..+... ........+++...... +......
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~------~~~~~~~ 148 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFG---------GEIDGFGSFEAALAGAG------PRLTEQP 148 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEec---------CcccccccHHHHhcccC------CCCCCCc
Confidence 9999999999999999999875543322221110 111100 00111122332222111 0111223
Q ss_pred CeEEEEcCCCCCCCCcceeh--hhhHHHhhhhhH----HhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 193 DAAALLYSSGTTGVSKGVIL--THKNFIAASLMI----SAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 193 ~~a~i~~TSGtTG~pK~v~~--t~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
+.++|+|||||||.||+|++ +|.++....... .....+ ...+++++.+|++|..++. .....+..|+++++
T Consensus 149 ~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~h~~~~~-~~~~~~~~g~~~~~ 225 (501)
T PRK13390 149 CGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDI--SESDIYYSSAPIYHAAPLR-WCSMVHALGGTVVL 225 (501)
T ss_pred ccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCC--CCCCeEEecccchhhhHHH-HHHHHHhcCceEEE
Confidence 57999999999999999995 555554332111 112222 2339999999999999885 33445678999999
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||+++++++.+.+++.++ .++++ .||
T Consensus 226 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~-~YG 303 (501)
T PRK13390 226 AKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLG-PIVYE-YYS 303 (501)
T ss_pred cCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcC-Cceee-eec
Confidence 9889999999999999999999999999998875432 3346789999999999999999999999887 88999 999
Q ss_pred ccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcccccc
Q 013780 345 MTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHT 424 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~ 424 (436)
+||+++++....... ....+++|+|+++ +++|+| ++++++++|+.|||+++|+.++.| |+++|+.+.+.+.. ..
T Consensus 304 ~tE~~~~~~~~~~~~-~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~t~~~~~~-~~ 377 (501)
T PRK13390 304 STEAHGMTFIDSPDW-LAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFR--YLNDPEKTAAAQHP-AH 377 (501)
T ss_pred ccccCceEEecchhh-ccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCcccc--ccCChhhhHHhhcc-CC
Confidence 999987554433221 3456799999999 799999 589999999999999999999999 99999999887621 12
Q ss_pred CCeeecCCCCC
Q 013780 425 DSFIRGKDQQT 435 (436)
Q Consensus 425 ~~~~~tgD~~~ 435 (436)
++|++|||+|+
T Consensus 378 ~~w~~tGDl~~ 388 (501)
T PRK13390 378 PFWTTVGDLGS 388 (501)
T ss_pred CceEEcCceEE
Confidence 57999999764
No 98
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-47 Score=378.15 Aligned_cols=348 Identities=25% Similarity=0.301 Sum_probs=288.4
Q ss_pred cccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHH
Q 013780 37 SASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVS 116 (436)
Q Consensus 37 ~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 116 (436)
++..++++|+++. ++.+||.||.++++++|..|. ++|+|+++++|+++++++++||+++|++++++++..+.+
T Consensus 10 ~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 10 AAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 4567889999986 799999999999999999985 579999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEE
Q 013780 117 ELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 196 (436)
Q Consensus 117 ~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (436)
++.++++.+++++++++++... . ......+... .. .........++++++
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~--~--~~~~~~~~~~--------------~~------------~~~~~~~~~~~~~a~ 132 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP--A--GLPHVPVRLH--------------AR------------SWHRYPEPDPDAPAL 132 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc--c--cccceeeecc--------------cc------------ccccCCCCCCCceEE
Confidence 9999999999999999763110 0 0000000000 00 000111235689999
Q ss_pred EEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHH
Q 013780 197 LLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMAL 276 (436)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~ 276 (436)
++|||||||.||+|+++|+++..+.......+.+.. .+++++.+|++|.+|++..++.++..|+++++.+.+++..++
T Consensus 133 i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 210 (471)
T PRK07787 133 IVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTA--DDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYA 210 (471)
T ss_pred EEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCc--cceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHH
Confidence 999999999999999999999988776655555433 389999999999999988899999999999999889999999
Q ss_pred HHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccC
Q 013780 277 RAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLEN 356 (436)
Q Consensus 277 ~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~ 356 (436)
+.++ +++|++.++|+++..|.+.... ...++++|.+++||+++++++.++|++.++ .++++ .||+||++..+....
T Consensus 211 ~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~ 286 (471)
T PRK07787 211 QALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALTG-HRPVE-RYGMTETLITLSTRA 286 (471)
T ss_pred HHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHcC-CCeec-ccCccccCcceecCC
Confidence 9999 9999999999999999875433 236789999999999999999999999887 89999 999999976544332
Q ss_pred CCCCccCcCccccccCCcEEEEEeCCCCccCC-CCC-ceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCC
Q 013780 357 PLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLP-PNQ-LGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 357 ~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~-~g~-~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
.. ..+++++|+|+++++++|+|+ ++.+++ .|+ .|||+++|+.++.| |+++++.+.+.|. .++||+|||+|
T Consensus 287 ~~--~~~~~~vG~~~~g~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~g--y~~~~~~t~~~~~---~~~~~~TGDlg 358 (471)
T PRK07787 287 DG--ERRPGWVGLPLAGVETRLVDE-DGGPVPHDGETVGELQVRGPTLFDG--YLNRPDATAAAFT---ADGWFRTGDVA 358 (471)
T ss_pred CC--cccCCcccccCCCcEEEEECC-CCCCCCCCCCCceEEEEECcccchh--hcCChhhchhccc---CCCceecCceE
Confidence 22 456788999999999999995 678887 354 89999999999999 9999999988772 46899999976
Q ss_pred C
Q 013780 435 T 435 (436)
Q Consensus 435 ~ 435 (436)
.
T Consensus 359 ~ 359 (471)
T PRK07787 359 V 359 (471)
T ss_pred E
Confidence 3
No 99
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-47 Score=388.03 Aligned_cols=382 Identities=21% Similarity=0.288 Sum_probs=290.0
Q ss_pred CchHHHHhhhcccCCCceEEEeCC-------CCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDAD-------SDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
|++.+.|.+++..+|+++|+++.+ ..+.+||.||.+++.++|+.|.++| .+||+|+|+++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578899999999999999998642 1268999999999999999999999 68999999999999999999999
Q ss_pred HHhCCeEeecCC---CCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCC------cEEeccCCccccccccccCcccch
Q 013780 100 IAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLP------AVLLGSKDKVSSSGLISRSSKIVS 170 (436)
Q Consensus 100 ~~~G~~~v~l~~---~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 170 (436)
+++|++++|+++ ..+.+++.++++.++++++++++...+.+...... ..++..+ .
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 143 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD----------------L 143 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec----------------c
Confidence 999999999997 44688999999999999999998776655432100 0011000 0
Q ss_pred hhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhcc----CCCCcEEEechhHHH
Q 013780 171 FHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV----GELDHVVLCVLPMFH 246 (436)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~p~~~ 246 (436)
+ +... . ..........+++++++|||||||.||+|.++|+++..++.......... ....+++++.+|++|
T Consensus 144 ~-~~~~--~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 218 (578)
T PRK05850 144 L-DLDS--P--RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYH 218 (578)
T ss_pred c-cccc--C--CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCC
Confidence 0 0000 0 11112234568999999999999999999999999988765543332111 122389999999999
Q ss_pred HHHHHHHHHhhccCCcEEEEcCCC----CHHHHHHHHHHhcceEEEecHHHHH-HHHhcc---ccCccCCCcceEEEecC
Q 013780 247 VFGLSVILYDQLQKGNCVVSMGKF----DIEMALRAIEKYRVTVWWVVPPIIL-ALAKNS---LVRKFDISSLKLVGSGA 318 (436)
Q Consensus 247 ~~g~~~~~~~~l~~G~~v~~~~~~----~~~~~~~~l~~~~~t~l~~~p~~~~-~l~~~~---~~~~~~l~~lr~i~~gg 318 (436)
..|+...++.++..|+++++.++. ++..+++.+++++++.+ .+|..+. .+.... .....+++++|.+++||
T Consensus 219 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg 297 (578)
T PRK05850 219 DMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGS 297 (578)
T ss_pred CchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECc
Confidence 999987799999999999998643 78999999999999865 5565543 333321 11234678999999999
Q ss_pred CCCcHHHHHHHHhhCC-----CCeeeeccccccccCCcccccCCCCCc-----------------------cCcCccccc
Q 013780 319 APLGKELMEDCQKNIP-----GATIFQVGYGMTETCAPISLENPLVGV-----------------------RRSGSAGTL 370 (436)
Q Consensus 319 ~~l~~~~~~~~~~~~~-----~~~i~~~~YG~tE~~~~~~~~~~~~~~-----------------------~~~~~~G~p 370 (436)
+++++++.++|.+.|+ +..+++ .||+||++..+......... .....+|.|
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p 376 (578)
T PRK05850 298 ERVHPATLKRFADRFAPFNLRETAIRP-SYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSP 376 (578)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccccC-ccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCC
Confidence 9999999999999874 246888 99999987554432211000 001134555
Q ss_pred cCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc--------cccCCeeecCCCCC
Q 013780 371 VAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC--------EHTDSFIRGKDQQT 435 (436)
Q Consensus 371 ~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~--------~~~~~~~~tgD~~~ 435 (436)
. +.+++|+|++++.++++|+.|||+++|+.++.| ||++|+.+.+.|.- -..++||+|||+|.
T Consensus 377 ~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~g--Y~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 377 R-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAG--YWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred C-CCEEEEEcCCCCcCCCCCCEEEEEEecCccccc--ccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 3 579999998788999999999999999999999 99999999988721 01257999999875
No 100
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-46 Score=374.76 Aligned_cols=375 Identities=23% Similarity=0.275 Sum_probs=295.7
Q ss_pred hhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC
Q 013780 34 FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY 113 (436)
Q Consensus 34 ~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 113 (436)
...++++|+++|+++..+++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 35678899999999865678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-----CcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCC
Q 013780 114 TVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVS 188 (436)
Q Consensus 114 ~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (436)
+.+++.++++.++++.+++++...+.+..... ...+....+ ........+.+.....+ ....
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-----~~~~ 150 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGD--------GELEGFVGYAEAVAGLP-----ATPI 150 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCC--------CCCcccccHHHHhcCCC-----CCCC
Confidence 99999999999999999999876655433321 111111110 01112222333322111 1111
Q ss_pred CCCCCeEEEEcCCCCCCCCcceeh--hhhHHHhhhh---hHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 189 VKQTDAAALLYSSGTTGVSKGVIL--THKNFIAASL---MISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~pK~v~~--t~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
....+.++++|||||||.||+|.+ +|.++..... .....+.+ ...+++++.+|++|.+++. ..+.++..|++
T Consensus 151 ~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~ 227 (511)
T PRK13391 151 ADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGF--RSDMVYLSPAPLYHSAPQR-AVMLVIRLGGT 227 (511)
T ss_pred CCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCC--CCCCeEEEcCCHHHHHHHH-HHHHHHHcCce
Confidence 234467899999999999999995 4665533221 11122222 2338999999999999885 66788999999
Q ss_pred EEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 264 v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
+++.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||+++++++.+++++.++ ..+++
T Consensus 228 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g-~~v~~- 305 (511)
T PRK13391 228 VIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWG-PIIHE- 305 (511)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcC-Cceee-
Confidence 9999889999999999999999999999999988765432 2345789999999999999999999999887 88999
Q ss_pred cccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc
Q 013780 342 GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC 421 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~ 421 (436)
.||+||+++++...... ....++++|+|+++ +++|+| +++++++.|+.|||+++|+ ++.| ||++++.+...+.
T Consensus 306 ~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~g--y~~~~~~~~~~~~- 378 (511)
T PRK13391 306 YYAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFE--YLNDPAKTAEARH- 378 (511)
T ss_pred eeccccccceEEecCcc-ccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceE--EcCChhHhHHhhc-
Confidence 99999998765543322 14567899999999 699999 5899999999999999999 8899 9999999888762
Q ss_pred cccCCeeecCCCC
Q 013780 422 EHTDSFIRGKDQQ 434 (436)
Q Consensus 422 ~~~~~~~~tgD~~ 434 (436)
..++|++|||+|
T Consensus 379 -~~~~w~~TGD~g 390 (511)
T PRK13391 379 -PDGTWSTVGDIG 390 (511)
T ss_pred -cCCCEEecCCEE
Confidence 125899999976
No 101
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.1e-47 Score=450.79 Aligned_cols=377 Identities=20% Similarity=0.288 Sum_probs=314.4
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.|.++++++|+++|+++. +..+||+||.++++++|+.|.+.|+++|++|+|++++++++++++||++++|+++
T Consensus 1131 ~~l~~~~~~~a~~~p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~ 1208 (4334)
T PRK05691 1131 AWLPELLNEQARQTPERIALVWD--GGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAY 1208 (4334)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 67999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|++|.++.+++.+++++++++++|++......+..... ...+..+.. ... ... ...+.
T Consensus 1209 vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~--------------~~~----~~~--~~~~~ 1267 (4334)
T PRK05691 1209 VPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEG-VSAIALDSL--------------HLD----SWP--SQAPG 1267 (4334)
T ss_pred EecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccC-ceEEeeccc--------------ccc----ccC--CCCCC
Confidence 999999999999999999999999999876554433211 111111100 000 000 11122
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++++|||||||.||||+++|+++.+.+........+.. .+++++..|++|..++. .++.+|..|+++++
T Consensus 1268 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~i 1344 (4334)
T PRK05691 1268 LHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDD--SDVLMQKAPISFDVSVW-ECFWPLITGCRLVL 1344 (4334)
T ss_pred CCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCC--CCEEEEeCCccHHHHHH-HHHHHHhCCCEEEE
Confidence 3346789999999999999999999999999988776555555533 39999999999988885 78999999999999
Q ss_pred cC---CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 267 MG---KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 267 ~~---~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
.+ ..++..+++.++++++|++.++|+++..|.+... ...+++||.+++||+++++++.++|.+.++++++++ .|
T Consensus 1345 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~Y 1421 (4334)
T PRK05691 1345 AGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHN-RY 1421 (4334)
T ss_pred cCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEe-CC
Confidence 85 3689999999999999999999999999987543 235789999999999999999999999998899999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccc--
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGC-- 421 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~-- 421 (436)
|+||++..++............++|+|+++++++|+| +++++++.|++|||+|+|+.++.| |+++|+.|.+.|..
T Consensus 1422 G~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~G--Yl~~p~~t~~~f~~~p 1498 (4334)
T PRK05691 1422 GPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARG--YLGRPALTAERFVPDP 1498 (4334)
T ss_pred CcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchh--hcCCccccHhhCCCCC
Confidence 9999987665432222244567899999999999999 489999999999999999999999 99999999998821
Q ss_pred c--ccCCeeecCCCCC
Q 013780 422 E--HTDSFIRGKDQQT 435 (436)
Q Consensus 422 ~--~~~~~~~tgD~~~ 435 (436)
+ ..++||+|||+|+
T Consensus 1499 ~~~~~~r~yrTGDl~~ 1514 (4334)
T PRK05691 1499 LGEDGARLYRTGDRAR 1514 (4334)
T ss_pred CCCCCceEEEccceEE
Confidence 1 1236999999874
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.9e-47 Score=451.10 Aligned_cols=383 Identities=16% Similarity=0.214 Sum_probs=314.2
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.++|.++++++|+++|+++. +..+||+||.++++++|+.|.++|+++|++|+|++++++++++++||++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3720 QSYVRLFEAQVAAHPQRIAASCL--DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cCHHHHHHHHHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 68999999999999999999988 7889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
||++|.++.+++.++++++++++++++................. ..+.+..+++...... ......
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~-~~~~~~ 3863 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-------------NRPRLLVWEEVQAGEV-ASHNPG 3863 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-------------cccceeeecccccccc-cccCCC
Confidence 99999999999999999999999999986544322221000000 0000000111100000 011122
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++|+|+|||||||.||||+++|+++.+.+........+... ++++...++++..+.+ .++.+|..|+++++
T Consensus 3864 ~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~fd~s~~-~~~~~l~~G~~l~i 3940 (4334)
T PRK05691 3864 IYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEA--DVIAQTASQSFDISVW-QFLAAPLFGARVEI 3940 (4334)
T ss_pred CCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCcc--ceEEEecCCchhHHHH-HHHHHHhCCCEEEE
Confidence 34567899999999999999999999999999988776666555433 9999999999999886 78999999999999
Q ss_pred cCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 267 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
.+. .++..+++.++++++|++.++|+++..+++.. ...+++||.+++||+++++++.++|.+.++++++++ .|
T Consensus 3941 ~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~Y 4016 (4334)
T PRK05691 3941 VPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVN-AY 4016 (4334)
T ss_pred cCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEe-Cc
Confidence 853 57899999999999999999999999887643 235789999999999999999999999988899999 99
Q ss_pred cccccCCcccccCCCCC--ccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc-
Q 013780 344 GMTETCAPISLENPLVG--VRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG- 420 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~--~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~- 420 (436)
|.||++..++....... .....++|+|++++++.|+| +.++++|.|.+|||+|+|+.++.| |+++|+.|.++|-
T Consensus 4017 G~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~G--Y~~~~~~t~~~f~~ 4093 (4334)
T PRK05691 4017 GPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRG--YVGDPLRTALAFVP 4093 (4334)
T ss_pred cCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEeccccccc--ccCCcccchhhccc
Confidence 99999876654322211 22345799999999999999 589999999999999999999999 9999999999982
Q ss_pred -cc--ccCCeeecCCCCC
Q 013780 421 -CE--HTDSFIRGKDQQT 435 (436)
Q Consensus 421 -~~--~~~~~~~tgD~~~ 435 (436)
.+ ..++||+|||+++
T Consensus 4094 ~p~~~~~~~~yrTGDl~~ 4111 (4334)
T PRK05691 4094 HPFGAPGERLYRTGDLAR 4111 (4334)
T ss_pred CCCCCCCceeeccCccee
Confidence 12 2357999999985
No 103
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=9.2e-47 Score=365.54 Aligned_cols=352 Identities=23% Similarity=0.323 Sum_probs=288.8
Q ss_pred cHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 56 SFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 56 Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
||.||.+.+.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhh
Q 013780 135 ELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTH 214 (436)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~ 214 (436)
.....+............. .......... ..........+++++++|||||||.||+|.+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~ 142 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPL-----------------ELAALDDAPA-PPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTH 142 (408)
T ss_pred chhhhccccCCceEEechh-----------------hhhhcccccc-cccccCCCCCCCcEEEEEcCCCCCCCCEEEecc
Confidence 8766655443222222110 0000000000 111111145788999999999999999999999
Q ss_pred hHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCC---HHHHHHHHHHhcceEEEecH
Q 013780 215 KNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD---IEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~---~~~~~~~l~~~~~t~l~~~p 291 (436)
+++..++..+.....+. ..+++++..|++|.+++. .++.++..|+++++.+... +..+.+.++++++|.+.++|
T Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p 219 (408)
T TIGR01733 143 RSLVNLLAWLARRYGLD--PDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTP 219 (408)
T ss_pred HHHHHHHHHHHHhcCCC--CCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCH
Confidence 99999888776655443 339999999999999885 7899999999999986543 68899999999999999999
Q ss_pred HHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCC-Ccc--CcCccc
Q 013780 292 PIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLV-GVR--RSGSAG 368 (436)
Q Consensus 292 ~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~-~~~--~~~~~G 368 (436)
.+++.|.+... ..+++||.+++||+++++++.+++++.++++.+++ .||+||+++++....... ... ++.++|
T Consensus 220 ~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~-~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G 295 (408)
T TIGR01733 220 SLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLIN-LYGPTETTVWSTATLVDADDAPRESPVPIG 295 (408)
T ss_pred HHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEe-cccCCceEEEEEEEEcCccccCCccccccC
Confidence 99999988765 46789999999999999999999999998799999 999999988775322111 111 378899
Q ss_pred cccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhc--cccc-cCC--eeecCCCCC
Q 013780 369 TLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW--GCEH-TDS--FIRGKDQQT 435 (436)
Q Consensus 369 ~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~--~~~~-~~~--~~~tgD~~~ 435 (436)
.|+++++++|+|+ +++.+++|+.|||+++|++++.| |+++++.+.+.| ..+. .++ ||+|||++.
T Consensus 296 ~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~ 364 (408)
T TIGR01733 296 RPLANTRLYVLDD-DLRPVPVGVVGELYIGGPGVARG--YLNRPELTAERFVPDPFAGGDGARLYRTGDLVR 364 (408)
T ss_pred cccCCceEEEECC-CCCCCCCCCceEEEecCcccccc--ccCChhhhhcceeeCCCCCCCCceEEECCceEE
Confidence 9999999999997 59999999999999999999999 999999998887 2122 233 999999874
No 104
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-46 Score=371.64 Aligned_cols=389 Identities=20% Similarity=0.238 Sum_probs=303.7
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+|+.++|.+.++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 68999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC-----CcEEeccCCccccccccccCcccchhhHHhhhcCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL-----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (436)
+++++.++.+++.++++.+++++++++....+.+.+... +.++...+... .....+..++++++....
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-- 153 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSG-----NDLLPGAVDYEDALAAGS-- 153 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcc-----cccCCccccHHHHHhccC--
Confidence 999999999999999999999999999877666554421 11222211110 011112445666655433
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhh------hcc-------CCCCcEEEechhHHHHH
Q 013780 182 TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQ------ELV-------GELDHVVLCVLPMFHVF 248 (436)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~-------~~~~~~~~~~~p~~~~~ 248 (436)
....... ...+.++++|||||||.||+|+++|.++........... ... ...+++++..+|++|..
T Consensus 154 ~~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 154 PERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred CcCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 1111112 233457899999999999999999999876544322111 000 01238899999999999
Q ss_pred HHHHHHHhhccCCcEEEEcC--CCCHHHHHHHHHHhcceEEEecHHHHHH-HHhccc-cCccCCCcceEEEecCCCCcHH
Q 013780 249 GLSVILYDQLQKGNCVVSMG--KFDIEMALRAIEKYRVTVWWVVPPIILA-LAKNSL-VRKFDISSLKLVGSGAAPLGKE 324 (436)
Q Consensus 249 g~~~~~~~~l~~G~~v~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~-l~~~~~-~~~~~l~~lr~i~~gg~~l~~~ 324 (436)
+++ .++.++..|+++++.+ .+++..+++.++++++|++.++|..+.. +.+... ....+++++|.+++||++++++
T Consensus 233 ~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~ 311 (533)
T PRK07798 233 GQW-AAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPS 311 (533)
T ss_pred hHH-HHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHH
Confidence 997 7889999999999998 8899999999999999999999876532 333322 2345678999999999999999
Q ss_pred HHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccc--cccCCcEEEEEeCCCCccCCCCCc--eEEEEecC
Q 013780 325 LMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAG--TLVAGVEAQIVSVDTLKPLPPNQL--GEIWVRGP 400 (436)
Q Consensus 325 ~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G--~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~ 400 (436)
+.+++++.+++..+++ .||+||++.+....... .....| .+.++..++|+|+ ++.++++|+. |+++ +++
T Consensus 312 ~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~----~~~~~g~~~~~~~~~~~i~~~-~~~~~~~g~~~~g~l~-~~~ 384 (533)
T PRK07798 312 VKEALLELLPNVVLTD-SIGSSETGFGGSGTVAK----GAVHTGGPRFTIGPRTVVLDE-DGNPVEPGSGEIGWIA-RRG 384 (533)
T ss_pred HHHHHHHHcCCCeEEe-eecccccccccccCCCC----CCccCCCCccCCCceEEEECC-CCCCCCCCCCCeeEEE-eec
Confidence 9999999997799999 99999986554433211 122334 7889999999995 7889999887 6665 566
Q ss_pred CcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 401 NVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 401 ~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
.++.| ||++++.+.+.|...+.++|++|||+++
T Consensus 385 ~~~~g--y~~~~~~t~~~f~~~~~~~~~~TGD~~~ 417 (533)
T PRK07798 385 HIPLG--YYKDPEKTAETFPTIDGVRYAIPGDRAR 417 (533)
T ss_pred Ccccc--ccCChhhhHHhhccCCCCceEEcCcEEE
Confidence 89999 9999999998885445567999999763
No 105
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-45 Score=371.25 Aligned_cols=389 Identities=21% Similarity=0.284 Sum_probs=299.9
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
+++.+.|.+.++.+|+++|+.+. +..+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 95 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVL 95 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEE
Confidence 78999999999999999999886 6889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC----CC-cEEeccCCccccccccccCcccchhhHHhhhcCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN----LP-AVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSV 181 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (436)
+|+++.++.+++.++++.++++.+++++...+.+.... .. ..++...... .. .....+..++..+.....
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-- 170 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPE--YP-GGRFIGALDYEAFLASGD-- 170 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccc--cc-cCCCcccccHHHHhccCC--
Confidence 99999999999999999999999999988766554321 11 2222211100 00 001112234555544322
Q ss_pred CCCC-CCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 182 TDIP-DVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 182 ~~~~-~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
.... .......+.++++|||||||.||+|+++|+++..++......+.+. .++++++.+|++|.+++...++..+.
T Consensus 171 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~--~~~~~l~~~pl~h~~~~~~~~~~~~~- 247 (545)
T PRK08162 171 PDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMP--KHPVYLWTLPMFHCNGWCFPWTVAAR- 247 (545)
T ss_pred ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCC--CCCeeEeccCcHhhhhHHHHHHHHHH-
Confidence 1111 1122456789999999999999999999998877655443434332 33899999999999998644454554
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeee
Q 013780 261 GNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQ 340 (436)
Q Consensus 261 G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~ 340 (436)
|++.++..++++..+++.|+++++|++.++|+++..|++........+.+++.++++|+++++++.+.+++. +.++++
T Consensus 248 ~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~ 325 (545)
T PRK08162 248 AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTH 325 (545)
T ss_pred ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceee
Confidence 555555567899999999999999999999999999998765444455667778899999999999999875 499999
Q ss_pred ccccccccCCcccccCCCC---------CccCcCccccccCC-cEEEEEeCCCCccCCC-C-CceEEEEecCCcccCccc
Q 013780 341 VGYGMTETCAPISLENPLV---------GVRRSGSAGTLVAG-VEAQIVSVDTLKPLPP-N-QLGEIWVRGPNVTPGIVY 408 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~-~~v~i~d~~~~~~~~~-g-~~Gel~v~g~~~~~g~~Y 408 (436)
.||+||+++.+....... ......++|.+.+. ..++|+|++++.+++. | +.|||+++|+.++.| |
T Consensus 326 -~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~g--Y 402 (545)
T PRK08162 326 -VYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKG--Y 402 (545)
T ss_pred -cccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhh--h
Confidence 999999865444321110 01123556776653 4688999778888876 3 469999999999999 9
Q ss_pred cCChhhhhhhccccccCCeeecCCCC
Q 013780 409 INFFVFTLFLWGCEHTDSFIRGKDQQ 434 (436)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~tgD~~ 434 (436)
+++++.+...| .++||+|||+|
T Consensus 403 ~~~~~~~~~~~----~~g~~~TGDl~ 424 (545)
T PRK08162 403 LKNPKATEEAF----AGGWFHTGDLA 424 (545)
T ss_pred cCChhhhHHHh----hCCCcccCceE
Confidence 99999999988 57899999986
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-46 Score=379.90 Aligned_cols=386 Identities=21% Similarity=0.250 Sum_probs=296.8
Q ss_pred cCCCCCCCchHHHHhhhcccCCCceEEEeCCC-CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 013780 20 VLPSDPSFSMVHFLFRNSASYSSKLALIDADS-DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLG 98 (436)
Q Consensus 20 ~~~~~~~~ti~~~l~~~~~~~p~~~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA 98 (436)
.++.. .|+.+.|...++++|+..++....+ .+.+||.||+.++.++|+.|.++|+++||+|+++++|+++++++++|
T Consensus 16 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 93 (579)
T PRK09192 16 RYADF--PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFA 93 (579)
T ss_pred cccch--hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHH
Confidence 44555 7899999999999987766533211 16799999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeecCCCCC-------HHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchh
Q 013780 99 VIAIGAIASTANPVYT-------VSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSF 171 (436)
Q Consensus 99 ~~~~G~~~v~l~~~~~-------~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (436)
|+++|++++++++..+ .+++.++++.++++++++++...+.+........ ......+
T Consensus 94 ~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~----------------~~~~~~~ 157 (579)
T PRK09192 94 CQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNP----------------LLHVLSH 157 (579)
T ss_pred HHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccc----------------ccceeeh
Confidence 9999999999987543 5899999999999999999876655544310000 0001122
Q ss_pred hHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHh-hhhccCCCCcEEEechhHHHHHHH
Q 013780 172 HDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISA-HQELVGELDHVVLCVLPMFHVFGL 250 (436)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~ 250 (436)
.++..... .........++++++++|||||||.||+|.++|+++..+...... ...+. .++++++.+|++|.+++
T Consensus 158 ~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~--~~d~~l~~~p~~h~~g~ 233 (579)
T PRK09192 158 AWFKALPE--ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVR--PGDRCVSWLPFYHDMGL 233 (579)
T ss_pred hhhcccCC--CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCC--CCCeEEEeCCCCCcchh
Confidence 22222211 111222346789999999999999999999999999987765544 33333 33999999999999999
Q ss_pred HHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhccc---cCccCCCcceEEEecCCCCcH
Q 013780 251 SVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSL---VRKFDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 251 ~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~lr~i~~gg~~l~~ 323 (436)
...++.++..|+++++.+. .++..+++.+.++++++++..|..+..+..... ....+++++|.+++||+++++
T Consensus 234 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~ 313 (579)
T PRK09192 234 VGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRP 313 (579)
T ss_pred HHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCH
Confidence 8778888999999977752 268899999999999988776665555543321 233568899999999999999
Q ss_pred HHHHHHHhhCCC-----CeeeeccccccccCCcccccCCCCC--------------------------ccCcCccccccC
Q 013780 324 ELMEDCQKNIPG-----ATIFQVGYGMTETCAPISLENPLVG--------------------------VRRSGSAGTLVA 372 (436)
Q Consensus 324 ~~~~~~~~~~~~-----~~i~~~~YG~tE~~~~~~~~~~~~~--------------------------~~~~~~~G~p~~ 372 (436)
++.+++.+.++. ..+++ .||+||+++.++....... .....++|+|+|
T Consensus 314 ~~~~~~~~~~~~~g~~~~~~~~-~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p 392 (579)
T PRK09192 314 DVLHQFAEAFAPAGFDDKAFMP-SYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALP 392 (579)
T ss_pred HHHHHHHHHHHhcCCChhhccc-ccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCC
Confidence 999999998742 34788 9999999766554332110 011357899999
Q ss_pred CcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 373 GVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 373 ~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+++++|+|+ ++..++.|+.|||+++|+.++.| ||++ +.+.+.+ ..++||+|||+|.
T Consensus 393 ~~~v~i~d~-~~~~~~~g~~Gel~i~g~~~~~g--Y~~~-~~~~~~~---~~dgw~~TGDlg~ 448 (579)
T PRK09192 393 GHEIEIRNE-AGMPLPERVVGHICVRGPSLMSG--YFRD-EESQDVL---AADGWLDTGDLGY 448 (579)
T ss_pred CcEEEEECC-CCCCCCCCCEEEEEecCCchhhh--hcCC-ccccccc---cCCceeeccceee
Confidence 999999994 78999999999999999999999 9999 5555444 3678999999874
No 107
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=7e-46 Score=402.07 Aligned_cols=381 Identities=22% Similarity=0.335 Sum_probs=297.5
Q ss_pred CchHHHHhhhcccCC-CceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 27 FSMVHFLFRNSASYS-SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.++.+.|.+.++++| ++.++.+. +++.+||+||.++++++|+.|.+ |+++||+|+++++|+++++++++||+++|++
T Consensus 631 ~~~~~~l~~~~~~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 631 RTLFEALIEAAKIHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred CCHHHHHHHHHHHcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 678888988888886 56666653 36899999999999999999976 9999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHh------hcCCCcEEeccCCccccccccccCcccchhhHHhhhcC
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK------DLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSG 179 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (436)
++++||..+.+++.+++++++++++++++...+... .......++..++.. ........+.+......
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~ 782 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVR------AQIGLADKIKGLLAGRF 782 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhh------ccCChHHHHHHHhhccC
Confidence 999999999999999999999999999876544321 111111122111100 00000111111111111
Q ss_pred CCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhcc
Q 013780 180 SVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQ 259 (436)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 259 (436)
+........++++++++|||||||.||+|.++|+++..+.........+.. +|++++.+|++|.+++...++.++.
T Consensus 783 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~g~~~~~~~~l~ 858 (1140)
T PRK06814 783 --PLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSP--EDKVFNALPVFHSFGLTGGLVLPLL 858 (1140)
T ss_pred --CccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCC--cCEEEEecchHHHHHHHHHHHHHHH
Confidence 111111346789999999999999999999999999888776655555433 3999999999999999767889999
Q ss_pred CCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCee
Q 013780 260 KGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATI 338 (436)
Q Consensus 260 ~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i 338 (436)
.|+++++.+ +.+...+.+.++++++|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.++ .++
T Consensus 859 ~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~ 935 (1140)
T PRK06814 859 SGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFG-IRI 935 (1140)
T ss_pred cCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHhC-CcE
Confidence 999999885 457788899999999999999999999887763 3356789999999999999999999999996 899
Q ss_pred eeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhh
Q 013780 339 FQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFL 418 (436)
Q Consensus 339 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~ 418 (436)
++ .||+||++..+....+. ..+.+++|+|+|++++++.+. .+ .++.|||+++|++++.| |+++++.....
T Consensus 936 ~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~g--Y~~~~~~~~~~ 1005 (1140)
T PRK06814 936 LE-GYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLG--YLRAENPGVLE 1005 (1140)
T ss_pred Ee-ccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchh--hcCCCCCCccc
Confidence 99 99999998776654433 456789999999999999874 32 36789999999999999 99876533211
Q ss_pred ccccccCCeeecCCCCC
Q 013780 419 WGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 419 ~~~~~~~~~~~tgD~~~ 435 (436)
. ..+|||+|||+|+
T Consensus 1006 ~---~~~g~~~TGDl~~ 1019 (1140)
T PRK06814 1006 P---PADGWYDTGDIVT 1019 (1140)
T ss_pred c---CCCCeEecCCEEE
Confidence 1 1478999999864
No 108
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=340.20 Aligned_cols=393 Identities=20% Similarity=0.211 Sum_probs=311.8
Q ss_pred CCCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 013780 23 SDPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAI 102 (436)
Q Consensus 23 ~~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~ 102 (436)
.+++.|+.+.+.++++++|+|+|+++.+.+..+||+|+..++.++|+.|...|++.||.|++.|+|.++|+.++|+++++
T Consensus 73 rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 73 RRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred hccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 44568999999999999999999999976789999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCC----CcEEeccCCccccccccccCcccchhhHHhhhc
Q 013780 103 GAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNL----PAVLLGSKDKVSSSGLISRSSKIVSFHDLIELS 178 (436)
Q Consensus 103 G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (436)
|++...||++...+-+.|.++.++++++|++.+..+.+.+... .-+-....+. ....++..++...++..
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~------~~~~~g~~~L~~~l~~~ 226 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGP------TSVPDGIESLLAKLSAA 226 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCC------CCCCchHHHHHHhhccc
Confidence 9999999999999999999999999999999998877766621 1111111100 02233334444444443
Q ss_pred CCCCC--CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHh
Q 013780 179 GSVTD--IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYD 256 (436)
Q Consensus 179 ~~~~~--~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 256 (436)
...+. .........++++.+|||||||.||+.++||..+...+..+.....+... |+++..+|++|.+|.+..+..
T Consensus 227 ~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~--DvvY~~lPLYHsaa~ilGi~~ 304 (649)
T KOG1179|consen 227 PKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTAD--DVVYTTLPLYHSAAGILGIGG 304 (649)
T ss_pred ccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCcc--ceEEEcchhHHHHHHHHHHHH
Confidence 32111 22345567789999999999999999999999998877765566555444 999999999999999999999
Q ss_pred hccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCC
Q 013780 257 QLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGA 336 (436)
Q Consensus 257 ~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~ 336 (436)
++..|+|+++-.+|+...+|+.+.+++||++.-.-.+.+.|...+......-+++|..+--| +.++.++.|.++|+..
T Consensus 305 ~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~ 382 (649)
T KOG1179|consen 305 CLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGII 382 (649)
T ss_pred HHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999988887788999886554 8899999999999988
Q ss_pred eeeeccccccccCCcccccCCCCCccCcCcccc------ccCCcEEEEEeCCCCcc----------CCCCCceEEEEec-
Q 013780 337 TIFQVGYGMTETCAPISLENPLVGVRRSGSAGT------LVAGVEAQIVSVDTLKP----------LPPNQLGEIWVRG- 399 (436)
Q Consensus 337 ~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~------p~~~~~v~i~d~~~~~~----------~~~g~~Gel~v~g- 399 (436)
+|.+ .||+||........ +...+.+|+ -+--+++-=+|++++++ |++||+|.++-+=
T Consensus 383 ~IgE-~YgaTEgn~~~~N~-----d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~ 456 (649)
T KOG1179|consen 383 KIGE-FYGATEGNSNLVNY-----DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIV 456 (649)
T ss_pred eEEE-EeccccCcceeeee-----cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEec
Confidence 8999 99999976544433 233344443 11223333345566654 7899999764332
Q ss_pred -CCc---ccCccccCChhhhhhhc---cccccCCeeecCCC
Q 013780 400 -PNV---TPGIVYINFFVFTLFLW---GCEHTDSFIRGKDQ 433 (436)
Q Consensus 400 -~~~---~~g~~Y~~~~~~~~~~~---~~~~~~~~~~tgD~ 433 (436)
-.. +.| |.++.+.+++.. .+-+.|-||.|||+
T Consensus 457 ~k~P~~~F~G--Y~g~~~~t~kKl~rDVFkkGD~~f~tGDl 495 (649)
T KOG1179|consen 457 QKNPLRSFLG--YAGPKKATEKKLLRDVFKKGDVYFNTGDL 495 (649)
T ss_pred cCCchhhhcc--ccCchhhhhhhhHHhhhccCcEEEeeCcE
Confidence 233 889 999888887766 33333557888885
No 109
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-46 Score=372.46 Aligned_cols=377 Identities=22% Similarity=0.283 Sum_probs=296.6
Q ss_pred chHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 28 SMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
++.+.|...++.+|+.+++.+.+.+..+||.||+++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 48888999999999999998887778999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHH-------HHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCC
Q 013780 108 TANPVYTVSE-------LSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGS 180 (436)
Q Consensus 108 ~l~~~~~~~~-------~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
++++..+.++ ..++++.++++.+++++.....+...... ......++++.....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~~~- 143 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK------------------GIRVLTVADLLAADP- 143 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc------------------CCceeehhhhcccCC-
Confidence 9998877543 45567888999999987654433322110 011223444433221
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccC
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQK 260 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 260 (436)
. ......++++++++|||||||.||+|+++|+++..++........+.. ..|++++.+|++|.+++...++.++..
T Consensus 144 -~--~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~-~~d~~~~~~p~~~~~g~~~~~~~~l~~ 219 (545)
T PRK07768 144 -I--DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDV-ETDVMVSWLPLFHDMGMVGFLTVPMYF 219 (545)
T ss_pred -C--CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCC-CCceeEEeCCCccchHHHHHHHHHHHC
Confidence 1 223446789999999999999999999999999887766555544321 127999999999999998677888999
Q ss_pred CcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhcc----ccCccCCCcceEEEecCCCCcHHHHHHHHhh
Q 013780 261 GNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNS----LVRKFDISSLKLVGSGAAPLGKELMEDCQKN 332 (436)
Q Consensus 261 G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~----~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~ 332 (436)
|+++++.++ .++..+++.+++++++++.++|.++..+.+.. .....++++||.++++|+++++++.+++.+.
T Consensus 220 g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~ 299 (545)
T PRK07768 220 GAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDA 299 (545)
T ss_pred CceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHH
Confidence 999988754 26788899999999999988888776665432 1123567899999999999999999999874
Q ss_pred ---CC--CCeeeeccccccccCCcccccCCCC------------------------CccCcCccccccCCcEEEEEeCCC
Q 013780 333 ---IP--GATIFQVGYGMTETCAPISLENPLV------------------------GVRRSGSAGTLVAGVEAQIVSVDT 383 (436)
Q Consensus 333 ---~~--~~~i~~~~YG~tE~~~~~~~~~~~~------------------------~~~~~~~~G~p~~~~~v~i~d~~~ 383 (436)
++ ...+++ .||+||++..+....... ...++.++|+|+++++++|+| ++
T Consensus 300 ~~~~g~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~ 377 (545)
T PRK07768 300 GARFGLRPEAILP-AYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-ED 377 (545)
T ss_pred HHhcCCCcccccc-cccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CC
Confidence 44 235888 999999987554332210 012456899999999999999 58
Q ss_pred CccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 384 LKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 384 ~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
++++++|+.|||+++|+.++.| |++++....... .++||+|||+++
T Consensus 378 ~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~~g~~~TGDl~~ 423 (545)
T PRK07768 378 GQVLPPRGVGVIELRGESVTPG--YLTMDGFIPAQD----ADGWLDTGDLGY 423 (545)
T ss_pred CCCCCCCCEEEEEEccCccccc--ccCCCCCccccc----CCCeeeccceEE
Confidence 8999999999999999999999 998655443332 568999999763
No 110
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-45 Score=366.68 Aligned_cols=371 Identities=23% Similarity=0.286 Sum_probs=288.6
Q ss_pred EEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHh
Q 013780 45 ALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD 124 (436)
Q Consensus 45 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 124 (436)
|++.. ++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++++++|.++.+++.++++.
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 81 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILED 81 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhc
Confidence 55555 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEccchHHHHhhcCCC-cEEeccCCccc-c------ccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEE
Q 013780 125 SNPKLVITVPELWDKVKDLNLP-AVLLGSKDKVS-S------SGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAA 196 (436)
Q Consensus 125 ~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (436)
+++++++++....+.+...... ..++....... . ............+++...... .......+++++
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~ 156 (509)
T PRK12406 82 SGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE-----PYDGPPVPQPQS 156 (509)
T ss_pred cCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccC-----ccCCCCCCCceE
Confidence 9999999988766655332211 11111110000 0 000011122334444432211 112335679999
Q ss_pred EEcCCCCCCCCcceehhhhHH---HhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHH
Q 013780 197 LLYSSGTTGVSKGVILTHKNF---IAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIE 273 (436)
Q Consensus 197 i~~TSGtTG~pK~v~~t~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~ 273 (436)
++|||||||.||+|.++|... ............+ ..++++++..|++|..+.. ..+.++..|+++++.+.+++.
T Consensus 157 i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~ 233 (509)
T PRK12406 157 MIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGL--KPGIRALLTGPLYHSAPNA-YGLRAGRLGGVLVLQPRFDPE 233 (509)
T ss_pred EEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCC--CCCceEEEEeCCcccchHH-HHHHHHhhheEEEEccCCCHH
Confidence 999999999999999866543 3322222223333 2338999999999988875 455678889999998888999
Q ss_pred HHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCc
Q 013780 274 MALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAP 351 (436)
Q Consensus 274 ~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~ 351 (436)
.+++.++++++|++.++|+++..|++.... ...+++++|.+++||+++++++.+++.+.++ ..+++ .||+||++.+
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~ 311 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG-PVIYE-YYGSTESGAV 311 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe-eccccccCce
Confidence 999999999999999999999999875432 3346789999999999999999999999987 88999 9999999876
Q ss_pred ccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCccc-CccccCChhhhhhhccccccCCeeec
Q 013780 352 ISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTP-GIVYINFFVFTLFLWGCEHTDSFIRG 430 (436)
Q Consensus 352 ~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~-g~~Y~~~~~~~~~~~~~~~~~~~~~t 430 (436)
++....+ ...+++++|+|+++++++|+|+ ++++++.|+.|||+++|+.++. | |+++++.+...+ .++|++|
T Consensus 312 ~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~~~--y~~~~~~~~~~~----~~~~~~T 383 (509)
T PRK12406 312 TFATSED-ALSHPGTVGKAAPGAELRFVDE-DGRPLPQGEIGEIYSRIAGNPDFT--YHNKPEKRAEID----RGGFITS 383 (509)
T ss_pred EecCccc-ccccCCCcCccCCCcEEEEECC-CCCCCCCCCceEEEEECCcccccc--ccCCchhccccc----CCCCeEE
Confidence 6544322 2456789999999999999995 7899999999999999998775 8 999998887765 5789999
Q ss_pred CCCCC
Q 013780 431 KDQQT 435 (436)
Q Consensus 431 gD~~~ 435 (436)
||++.
T Consensus 384 GD~~~ 388 (509)
T PRK12406 384 GDVGY 388 (509)
T ss_pred ccEEE
Confidence 99763
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-45 Score=364.33 Aligned_cols=365 Identities=26% Similarity=0.320 Sum_probs=290.7
Q ss_pred EEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHh
Q 013780 45 ALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKD 124 (436)
Q Consensus 45 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 124 (436)
|++-...+..+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~ 81 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDD 81 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhc
Confidence 34434447999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEccchHHHHhhcC------CCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEE
Q 013780 125 SNPKLVITVPELWDKVKDLN------LPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALL 198 (436)
Q Consensus 125 ~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (436)
++++++++++.....+.... .+.+.+... .......+++...... .......++.++++
T Consensus 82 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~ 146 (502)
T PRK08276 82 SGAKVLIVSAALADTAAELAAELPAGVPLLLVVAG----------PVPGFRSYEEALAAQP-----DTPIADETAGADML 146 (502)
T ss_pred CCCCEEEEccchhhHHHHHhhhccccccEEEEeCC----------CCCccccHHHHHhcCC-----CCCCCCCCcceEEE
Confidence 99999999987666554321 122222111 1122233444433221 11123456789999
Q ss_pred cCCCCCCCCcceehhhhHHHhhhh--hHHhh--hhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHH
Q 013780 199 YSSGTTGVSKGVILTHKNFIAASL--MISAH--QELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEM 274 (436)
Q Consensus 199 ~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~--~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~ 274 (436)
|||||||.||+|.++|.++..... ..... .......++++++..|++|.+++. ..+.++..|+++++.+.+++..
T Consensus 147 ~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 225 (502)
T PRK08276 147 YSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLR-FGMSALALGGTVVVMEKFDAEE 225 (502)
T ss_pred ECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHH-HHHHHHhccceEEEcCCCCHHH
Confidence 999999999999999877654321 11011 111112348999999999999986 5567899999999998899999
Q ss_pred HHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcc
Q 013780 275 ALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPI 352 (436)
Q Consensus 275 ~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~ 352 (436)
+++.++++++|++.++|+++..+.+.... ...+++++|.+++||++++.++.+++.+.++ ..+++ .||+||+++++
T Consensus 226 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~-~yG~tE~~~~~ 303 (502)
T PRK08276 226 ALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHE-YYASSEGGGVT 303 (502)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhh-hccccccccee
Confidence 99999999999999999999999876543 3346889999999999999999999999987 88899 99999998866
Q ss_pred cccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCC
Q 013780 353 SLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKD 432 (436)
Q Consensus 353 ~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD 432 (436)
+..... .....+++|+|+ +++++|+|+ ++.+++.|+.|||+++|+.++.| |+++++.+...+ ..++|++|||
T Consensus 304 ~~~~~~-~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~g--y~~~~~~~~~~~---~~~~~~~TGD 375 (502)
T PRK08276 304 VITSED-WLAHPGSVGKAV-LGEVRILDE-DGNELPPGEIGTVYFEMDGYPFE--YHNDPEKTAAAR---NPHGWVTVGD 375 (502)
T ss_pred EecCcc-ccccCCCcceec-ccEEEEECC-CCCCCcCCCceEEEEECCCccch--hcCCHHHHHHHh---cCCCceeecc
Confidence 554332 135567899999 889999994 78999999999999999999999 999999988877 2458999999
Q ss_pred CCC
Q 013780 433 QQT 435 (436)
Q Consensus 433 ~~~ 435 (436)
+++
T Consensus 376 ~~~ 378 (502)
T PRK08276 376 VGY 378 (502)
T ss_pred eEE
Confidence 873
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-45 Score=385.42 Aligned_cols=387 Identities=14% Similarity=0.166 Sum_probs=286.5
Q ss_pred CCCCchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 24 DPSFSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 24 ~~~~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
..++|+.++|.++++++|+++|+++. ++.+||+||.++++++|+.|.++|+++||+|+|+++|+++++++++||+++|
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 45589999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCC
Q 013780 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTD 183 (436)
Q Consensus 104 ~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
++++|++|. +++.++++.++++++|+++...+.+.....+.+++ ..... .............+++........+.
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVL-GGGES-RDLDLPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEe-cCCcc-ccccCCcchhhhhhhhcCcccccCCc
Confidence 999999985 67899999999999999987776655433232222 11100 00000000011112111110000000
Q ss_pred -CCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCc
Q 013780 184 -IPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGN 262 (436)
Q Consensus 184 -~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 262 (436)
.......++++++|+|| ||||.||++.++|.+.............+ ..+|++++.+|++|.+++...++.++..|+
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l--~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~ 673 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAAL--DRRDTVYCLTPLHHESGLLVSLGGAVVGGS 673 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCC--CCCCeEEEecChHHHhHHHHHHHHHhccce
Confidence 01112236889999998 57777777777877665443332233333 234999999999999999766777888888
Q ss_pred EEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecc
Q 013780 263 CVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVG 342 (436)
Q Consensus 263 ~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~ 342 (436)
++++.+.+++..+++.|+++++|+++++|+++..|.+.......++++||.++. +.+++++.+++.+.|++.++++ .
T Consensus 674 ~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~~-~ 750 (994)
T PRK07868 674 RIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVEAFAPAHVVE-F 750 (994)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHHHhCchheee-e
Confidence 888888899999999999999999999999999998875544456789998763 3499999999999998789999 9
Q ss_pred ccccccCCcccccCCCCCccCcCccccccCCc-EEEEE--eC--------CCC--ccCCCCCceEEEEecCCcccCcccc
Q 013780 343 YGMTETCAPISLENPLVGVRRSGSAGTLVAGV-EAQIV--SV--------DTL--KPLPPNQLGEIWVRGPNVTPGIVYI 409 (436)
Q Consensus 343 YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~-~v~i~--d~--------~~~--~~~~~g~~Gel~v~g~~~~~g~~Y~ 409 (436)
||+||++.... .. . ..+++++|+|+|++ +++|. |+ ++| +.++.|+.|||+++|+. |+
T Consensus 751 YG~TE~~~~~~-~~-~--~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~------~~ 820 (994)
T PRK07868 751 FATTDGQAVLA-NV-S--GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARG------PI 820 (994)
T ss_pred eeccccccccc-cc-C--CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCC------CC
Confidence 99999865433 22 1 34678999999998 67664 21 345 56788999999999974 55
Q ss_pred CChhhhhhhccccc-cCCeeecCCCCC
Q 013780 410 NFFVFTLFLWGCEH-TDSFIRGKDQQT 435 (436)
Q Consensus 410 ~~~~~~~~~~~~~~-~~~~~~tgD~~~ 435 (436)
+|+.+... ++|. .++||+|||+|+
T Consensus 821 -~p~~t~~~-~~~~~~dgw~~TGDlg~ 845 (994)
T PRK07868 821 -DPTASVKR-GVFAPADTWISTEYLFR 845 (994)
T ss_pred -ChhhhhHh-cccccCCEEEeccceEE
Confidence 34443322 2232 478999999874
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-44 Score=353.78 Aligned_cols=338 Identities=22% Similarity=0.305 Sum_probs=275.5
Q ss_pred chHHHH-hhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 28 SMVHFL-FRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 28 ti~~~l-~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
++.+.+ .++++++|+++|+++. ++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 445555 4557899999999875 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+++++..+.+++..+++++++++++++++... +.... .. ... .. .....
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~--~~---------------------~~~-----~~--~~~~~ 129 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSALT--SL---------------------HLQ-----LV--EGAHA 129 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhcc--cc---------------------ccc-----cc--cccCc
Confidence 99999999999999999999999998765422 11000 00 000 00 11112
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++++++|||||||.||+|.+||+++..++........... +++++..+|++|.+++. .++.++..|+++++
T Consensus 130 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~--~~~~l~~~p~~h~~g~~-~~~~~l~~G~~v~~ 206 (458)
T PRK09029 130 VAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTA--QDSWLLSLPLFHVSGQG-IVWRWLYAGATLVV 206 (458)
T ss_pred ccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCc--cceEEEecCcHhhhhhH-HHHHHHhCCceEEe
Confidence 3345788999999999999999999999999998776655544433 38999999999999985 67788999999998
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMT 346 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~t 346 (436)
.+. ..+++.+ .++|.+..+|+++..+...... ..++|.+++||+++++.+.+++.+. +.++++ .||+|
T Consensus 207 ~~~---~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~-~YG~t 274 (458)
T PRK09029 207 RDK---QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWC-GYGLT 274 (458)
T ss_pred CCh---HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEec-ccccc
Confidence 864 5566666 3799999999999998876543 3479999999999999999999865 499999 99999
Q ss_pred ccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCC
Q 013780 347 ETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDS 426 (436)
Q Consensus 347 E~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~ 426 (436)
|++...+.... ....++|+|+++++++|++ |||+++|+.++.| |+++++.+.... .++
T Consensus 275 E~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~g--Y~~~~~~~~~~~----~~~ 332 (458)
T PRK09029 275 EMASTVCAKRA----DGLAGVGSPLPGREVKLVD------------GEIWLRGASLALG--YWRQGQLVPLVN----DEG 332 (458)
T ss_pred ccCcceeccCC----CCCCCCCCCCCCCEEEEeC------------CEEEEecCceeee--eecCcccccccc----CCC
Confidence 99875543322 2235699999999999986 8999999999999 999998876543 478
Q ss_pred eeecCCCCC
Q 013780 427 FIRGKDQQT 435 (436)
Q Consensus 427 ~~~tgD~~~ 435 (436)
||+|||+|+
T Consensus 333 ~~~TGD~~~ 341 (458)
T PRK09029 333 WFATRDRGE 341 (458)
T ss_pred ccCCCCcEE
Confidence 999999874
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.2e-44 Score=353.45 Aligned_cols=315 Identities=18% Similarity=0.233 Sum_probs=252.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
.-+.|+||.++++++|+.|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 357899999999999999999998 5799999999999999999999999999999999999999999999999999999
Q ss_pred EccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCccee
Q 013780 132 TVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVI 211 (436)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~ 211 (436)
++....... . .. .........+++.++++|||||||.||+|+
T Consensus 98 ~~~~~~~~~------------~---------~~-----------------~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~ 139 (452)
T PRK07445 98 GLDQLKLSH------------P---------PP-----------------LPSQGILPNLETGWIMIPTGGSSGQIRFAI 139 (452)
T ss_pred ecCcccccc------------C---------CC-----------------CCccccCCCCCCcEEEEeCCCCCCCCcEEE
Confidence 876532100 0 00 000011134678999999999999999999
Q ss_pred hhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecH
Q 013780 212 LTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 212 ~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
+||+++..++........+ .++.+++.+|++|.+|+. .++.++..|+++++.+............++++|++.++|
T Consensus 140 ~t~~~l~~~~~~~~~~~~~---~~~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP 215 (452)
T PRK07445 140 HTWETLTASVQGFQRYFQL---QQVNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVP 215 (452)
T ss_pred echHHHHHHHHHHHHHhcC---CCCceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehH
Confidence 9999998877765554433 225678899999999995 778899999999988643333333444578999999999
Q ss_pred HHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCcccccc
Q 013780 292 PIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLV 371 (436)
Q Consensus 292 ~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~ 371 (436)
+++..+.+.. ...+++||.+++||+++++++.+++++. ++++++ .||+||++..+....+.......+++|+|+
T Consensus 216 ~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~ 289 (452)
T PRK07445 216 TQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAP-TYGMTETASQIATLKPDDFLAGNNSSGQVL 289 (452)
T ss_pred HHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEec-CcchhhhcccccccCchhhccCCCcCCccC
Confidence 9999988632 2357899999999999999999998764 489999 999999986655443332223567899999
Q ss_pred CCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 372 AGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 372 ~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
|+++++|+ .|+.|||+++|+.++.| |++++. ..++||+|||+|+
T Consensus 290 p~~~v~i~---------~g~~Gel~v~g~~~~~g--Y~~~~~---------~~~g~~~TGDl~~ 333 (452)
T PRK07445 290 PHAQITIP---------ANQTGNITIQAQSLALG--YYPQIL---------DSQGIFETDDLGY 333 (452)
T ss_pred CCCeEEEc---------CCCcceEEEeCCccchh--hcCCcc---------CCCCEEECCCEEE
Confidence 99999998 36789999999999999 998543 2467999999864
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=9.2e-43 Score=340.50 Aligned_cols=329 Identities=26% Similarity=0.352 Sum_probs=266.5
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 56 Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++++++++.++.+++..++++++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhh
Q 013780 136 LWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHK 215 (436)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~ 215 (436)
..... ... ..+..+...... ..........+++++++|||||||.||+|.++|+
T Consensus 81 ~~~~~-------~~~------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~ 134 (436)
T TIGR01923 81 LEEKD-------FQA------------------DSLDRIEAAGRY-ETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFR 134 (436)
T ss_pred ccccc-------eee------------------cchHhhhhcccc-cccccccCCcCceEEEEeCCCCCCCCcEEEEehH
Confidence 32110 000 011111111110 1111233456789999999999999999999999
Q ss_pred HHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHH
Q 013780 216 NFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIIL 295 (436)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~ 295 (436)
++..++........... .+++++.+|++|..++. .++.++..|+++++.+.+ ..+++.++++++|++.++|+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~ 209 (436)
T TIGR01923 135 NHYASAVGSKENLGFTE--DDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLN 209 (436)
T ss_pred HHHHHHHHHHhhcCCCC--CceEEEccCcHhHHHHH-HHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHH
Confidence 99988777665554433 39999999999999985 788999999999999765 39999999999999999999999
Q ss_pred HHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcE
Q 013780 296 ALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVE 375 (436)
Q Consensus 296 ~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 375 (436)
.+.+..... +++|.+++||+++++++.+++++. ++.+++ .||+||+++.++.........+. ++|.|+++++
T Consensus 210 ~l~~~~~~~----~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~~ 281 (436)
T TIGR01923 210 RLLDEGGHN----ENLRKILLGGSAIPAPLIEEAQQY--GLPIYL-SYGMTETCSQVTTATPEMLHARP-DVGRPLAGRE 281 (436)
T ss_pred HHHhCcCCC----CceEEEEECCCCCCHHHHHHHHHh--CCceee-EecCCccchhccCcCcccccccc-CCCccCCCcE
Confidence 998875422 689999999999999999998875 599999 99999998766544333212223 5999999999
Q ss_pred EEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccccCCeeecCCCCC
Q 013780 376 AQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEHTDSFIRGKDQQT 435 (436)
Q Consensus 376 v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~~~~~~~tgD~~~ 435 (436)
+++.+.+. ++.|||+++|+.++.| |+++++.+...+ .++||+|||+++
T Consensus 282 ~~i~~~~~------~~~Gel~v~~~~~~~g--y~~~~~~~~~~~----~~~~~~TGD~~~ 329 (436)
T TIGR01923 282 IKIKVDNK------EGHGEIMVKGANLMKG--YLYQGELTPAFE----QQGWFNTGDIGE 329 (436)
T ss_pred EEEEeCCC------CCceEEEEECCccchh--hCCChhhhhhhh----cCCCeeccceEE
Confidence 99944222 2679999999999999 999888877665 468999999763
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9.3e-43 Score=345.39 Aligned_cols=338 Identities=18% Similarity=0.196 Sum_probs=245.8
Q ss_pred cCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch------HHHHhhc----CCCcEEeccCCc
Q 013780 86 APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL------WDKVKDL----NLPAVLLGSKDK 155 (436)
Q Consensus 86 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~------~~~~~~~----~~~~~~~~~~~~ 155 (436)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+... ....+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 1111111 111122211100
Q ss_pred cccccccccCcccchhhHHhhhcCCC-----CCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc
Q 013780 156 VSSSGLISRSSKIVSFHDLIELSGSV-----TDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL 230 (436)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~ 230 (436)
.... ........++++....... .........++++++|+|||||||.||+|++||+++..++........+
T Consensus 81 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~ 157 (499)
T PLN03051 81 PVAV---PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDI 157 (499)
T ss_pred ccCC---ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCC
Confidence 0000 0001223455554221100 0111122356899999999999999999999999987765443333333
Q ss_pred cCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccc--cCccC
Q 013780 231 VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSL--VRKFD 307 (436)
Q Consensus 231 ~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~--~~~~~ 307 (436)
. .+|++++.+|++|..++. .++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+... ....+
T Consensus 158 ~--~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~ 234 (499)
T PLN03051 158 Q--PGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLD 234 (499)
T ss_pred C--CCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCC
Confidence 2 339999999999999975 7888999999999886 4788999999999999999999999999987643 33457
Q ss_pred CCcceEEEecCCCCcHHHHHHHHhhCC-CCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCcc
Q 013780 308 ISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKP 386 (436)
Q Consensus 308 l~~lr~i~~gg~~l~~~~~~~~~~~~~-~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~ 386 (436)
+++||.+++||+++++++.+++++.++ +..+++ .||+||+++.+....... ..+++++|+|.++++++|+| ++|++
T Consensus 235 ~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~ivd-~~g~~ 311 (499)
T PLN03051 235 WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIE-YCGGTELASGYISSTLLQ-PQAPGAFSTASLGTRFVLLN-DNGVP 311 (499)
T ss_pred chhheEEEecCCCCCHHHHHHHHHhccccceeEe-eeccccccceeecccccC-CCCCccccCCCCCceEEEEC-CCCCC
Confidence 889999999999999999988887432 378899 999999875443322221 34568999999999999999 58999
Q ss_pred CCCC--CceEEEEecCCc--ccCccccCChhhhhhhc-c--cc--ccCCeeecCCCCC
Q 013780 387 LPPN--QLGEIWVRGPNV--TPGIVYINFFVFTLFLW-G--CE--HTDSFIRGKDQQT 435 (436)
Q Consensus 387 ~~~g--~~Gel~v~g~~~--~~g~~Y~~~~~~~~~~~-~--~~--~~~~~~~tgD~~~ 435 (436)
++.| ++|||+++|+.+ +.| ||+++. +...+ + |+ ....||+|||+|+
T Consensus 312 ~~~g~~~~Gel~v~g~~~~~~~g--y~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~ 366 (499)
T PLN03051 312 YPDDQPCVGEVALAPPMLGASDR--LLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMK 366 (499)
T ss_pred CCCCCCcceEEEEecCcCCCCcc--ccCCcc-cceeeecCCccccCCcceeecCCeEE
Confidence 9988 479999999976 589 998653 33222 1 11 1224899999874
No 117
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=324.53 Aligned_cols=406 Identities=24% Similarity=0.316 Sum_probs=310.5
Q ss_pred CcCCCCCCCchHHHHhhhc--ccCCCceEEEeCCCC----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcH
Q 013780 19 LVLPSDPSFSMVHFLFRNS--ASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF 92 (436)
Q Consensus 19 ~~~~~~~~~ti~~~l~~~~--~~~p~~~a~~~~~~~----~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~ 92 (436)
.+++.. -.|+.+.+..+. ...++++++++...+ ..+||.|+.+++.++|+.|++.|+++||+|++++|+.+++
T Consensus 56 ~w~~g~-~ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~ 134 (626)
T KOG1175|consen 56 KWFPGA-FLNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEA 134 (626)
T ss_pred cccccc-hhhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHH
Confidence 444442 255555554433 224788888765222 4599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCcc-------ccccccccC
Q 013780 93 PICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKV-------SSSGLISRS 165 (436)
Q Consensus 93 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 165 (436)
+++++||.++|++.+++-..++.+++...++.++++++++.+......+......++...-... .........
T Consensus 135 ~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 214 (626)
T KOG1175|consen 135 VIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR 214 (626)
T ss_pred HHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc
Confidence 9999999999999999999999999999999999999999976555433332111110000000 000000001
Q ss_pred cccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhh-hhHHhhhhccCCCCcEEEechhH
Q 013780 166 SKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAAS-LMISAHQELVGELDHVVLCVLPM 244 (436)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~ 244 (436)
.....+++.+.... +..+....+.+++.+|+|||||||.||++.+++....-.. ........ ..+.|++++....
T Consensus 215 ~~d~~~~~~~~~a~--~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d--~q~~dv~~~~~d~ 290 (626)
T KOG1175|consen 215 NRDLFWSLELKKAS--PEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFD--LQPSDVLWCASDL 290 (626)
T ss_pred cccccHHHHhhhcC--CCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceecc--CCCcceEEEeccc
Confidence 11234455544444 3334667788999999999999999999999888765442 22222222 2334999999999
Q ss_pred HHHHHHHHHHHhhccCCcEEEEc--CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--CccCCCcceEEEecCCC
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSM--GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--RKFDISSLKLVGSGAAP 320 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~--~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~l~~lr~i~~gg~~ 320 (436)
.|+.+.++..+.+|.+|+++++. +++++..+++.+.++++|+++..|+.++.|.+.... ...++++||++.++||+
T Consensus 291 GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gep 370 (626)
T KOG1175|consen 291 GWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEP 370 (626)
T ss_pred CeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCcc
Confidence 99999998899999999999998 356999999999999999999999999988776544 34455789999999999
Q ss_pred CcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCC-CceEEEEec
Q 013780 321 LGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPN-QLGEIWVRG 399 (436)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g-~~Gel~v~g 399 (436)
+.++..+++.+.++..+|++ .||+||+|+.+....+....-++++.+.|.+++.+.|.|+ +|..++.+ +.|+|+++.
T Consensus 371 i~~~~~ew~~~~~~~~pv~e-~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de-~g~~~~~~~~~G~l~~~~ 448 (626)
T KOG1175|consen 371 INPEAWEWWKRVTGLDPIYE-TYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDE-NGNELPPSTGNGELRLKP 448 (626)
T ss_pred CCcchHHHHHHhcCccchhh-ceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECC-CCCCcCCCCceeEEEEeC
Confidence 99999999999998447999 9999999998887766633578999999999999999995 89988876 889999998
Q ss_pred C---CcccCccccCChhhhhhhccccc-cCCeeecCCCCC
Q 013780 400 P---NVTPGIVYINFFVFTLFLWGCEH-TDSFIRGKDQQT 435 (436)
Q Consensus 400 ~---~~~~g~~Y~~~~~~~~~~~~~~~-~~~~~~tgD~~~ 435 (436)
+ ..+.+ ||+|++.... .+|. -.||+.|||.++
T Consensus 449 ~~P~~~~r~--~~~n~erf~~--~yf~k~pg~y~tGD~~~ 484 (626)
T KOG1175|consen 449 PWPPGMFRT--LWGNHERFRA--AYFKKFPGYYFTGDGGR 484 (626)
T ss_pred CCCcccccc--ccCCHHHhhh--hhcccCCceEEecCceE
Confidence 5 56888 9999993222 2222 367888998874
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-40 Score=320.44 Aligned_cols=287 Identities=17% Similarity=0.140 Sum_probs=242.8
Q ss_pred EEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhc
Q 013780 46 LIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDS 125 (436)
Q Consensus 46 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 125 (436)
+++. ++.+||.||.++++++|+.|. .|+++|++|+|+++|+++++++++|++++|++++|+++..+.+++..+++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 4555 689999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCC
Q 013780 126 NPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTG 205 (436)
Q Consensus 126 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG 205 (436)
+++++++++.... . . . .....++++++++|||||||
T Consensus 79 ~~~~~i~~~~~~~-----------~--~----------------~---------------~~~~~~~~~~~i~~TSGtTG 114 (414)
T PRK08308 79 GCHGLLYGESDFT-----------K--L----------------E---------------AVNYLAEEPSLLQYSSGTTG 114 (414)
T ss_pred CCCEEEecCcccc-----------c--c----------------c---------------CCCCCCCCceEEEECCCCCC
Confidence 9999998753100 0 0 0 00124578999999999999
Q ss_pred CCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcce
Q 013780 206 VSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVT 285 (436)
Q Consensus 206 ~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t 285 (436)
.||+|++||+++..+...+...+.... +++++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|
T Consensus 115 ~PKgv~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t 192 (414)
T PRK08308 115 EPKLIRRSWTEIDREIEAYNEALNCEQ--DETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQH 192 (414)
T ss_pred CCcEEEEehHhHHHHHHHHHHhhCCCc--ccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCe
Confidence 999999999999988776655554433 389999999999999987899999999999999889999999999999999
Q ss_pred EEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcC
Q 013780 286 VWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSG 365 (436)
Q Consensus 286 ~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~ 365 (436)
+++++|+++..|.+..... .+++.+++||+++++++.+++++. ..++++ .||+||++++.... . ...++
T Consensus 193 ~~~~~P~~~~~l~~~~~~~----~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~-~YG~tE~~~~~~~~--~--~~~~~ 261 (414)
T PRK08308 193 ILYAVPLMLHILGRLLPGT----FQFHAVMTSGTPLPEAWFYKLRER--TTYMMQ-QYGCSEAGCVSICP--D--MKSHL 261 (414)
T ss_pred EEEcCHHHHHHHHhcCCcc----ccccEEEEccCCCCHHHHHHHHHh--CChhhh-ccCccccCCeeecC--C--CCCCC
Confidence 9999999999998765321 368899999999999999999987 378999 99999998644322 1 34567
Q ss_pred ccccccCCcEEEEEeCCCCccCCCCCceEEEEec
Q 013780 366 SAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRG 399 (436)
Q Consensus 366 ~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g 399 (436)
++|+|+|++++++.+. .++.|||++++
T Consensus 262 ~~G~p~~~~~~~~~~~-------~~~~gel~v~~ 288 (414)
T PRK08308 262 DLGNPLPHVSVSAGSD-------ENAPEEIVVKM 288 (414)
T ss_pred ccCccCCCeEEEEecC-------CCCCceEEEEc
Confidence 8999999999999762 36679999975
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=3.7e-39 Score=341.11 Aligned_cols=376 Identities=13% Similarity=0.069 Sum_probs=276.2
Q ss_pred CchHHHHhhhcccCCCceEEEeC-CCC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 013780 27 FSMVHFLFRNSASYSSKLALIDA-DSD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIG 103 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~-~~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G 103 (436)
.|+.++|.+.++++|+++|+... ..+ +++||+|+.++++++|+.|.++|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 68999999999999999999742 123 689999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcC---CCcEEeccCCccccccc--cccCcccchhhHHhhhc
Q 013780 104 AIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLN---LPAVLLGSKDKVSSSGL--ISRSSKIVSFHDLIELS 178 (436)
Q Consensus 104 ~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 178 (436)
++.||+.+ +.+++.+++++++++++|++.+....+.... .+.+++..+........ ......+.+|++++..+
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G 584 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKG 584 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcC
Confidence 99999975 4679999999999999999988777665542 33444432110000000 00111356788888765
Q ss_pred CCCCCCCCCCCCCCCeEEEEc---CCCCCCCCcceehhhhHHHhhhhhHHhhhhcc-CCCCcEEEechhHHHHHHHHHHH
Q 013780 179 GSVTDIPDVSVKQTDAAALLY---SSGTTGVSKGVILTHKNFIAASLMISAHQELV-GELDHVVLCVLPMFHVFGLSVIL 254 (436)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~ 254 (436)
............+++++.|+| ||||||.||||++||+|++.++.......... ...+|++++.+|++|+++.. ..
T Consensus 585 ~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~-~~ 663 (1452)
T PTZ00297 585 RLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV-FV 663 (1452)
T ss_pred cccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH-HH
Confidence 421222223446788999985 99999999999999999999988765432211 12349999999999999975 66
Q ss_pred HhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhcccc--------------------------Ccc--
Q 013780 255 YDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLV--------------------------RKF-- 306 (436)
Q Consensus 255 ~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--------------------------~~~-- 306 (436)
+.++..|+++.. +++..+++.|++++||+++++|++|+.+.+.... ...
T Consensus 664 ~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~ 740 (1452)
T PTZ00297 664 LGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDS 740 (1452)
T ss_pred HHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 778999999874 4789999999999999999999999876543100 000
Q ss_pred --------------CCCcceEEEecCC--CCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccc
Q 013780 307 --------------DISSLKLVGSGAA--PLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTL 370 (436)
Q Consensus 307 --------------~l~~lr~i~~gg~--~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p 370 (436)
--.++|.+++||+ +++..+.. ++++.. +||+||.. +.+.+. ..+ ..|.|
T Consensus 741 ~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~-g~glTE~~---~~~~~~--~~~--~~G~P 805 (1452)
T PTZ00297 741 SLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCY-VPCLREVF---FLPSEG--VFC--VDGTP 805 (1452)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEE-ecceEEee---eecCCC--Ccc--cCCee
Confidence 0046889998873 44433333 477888 99999943 233333 222 23999
Q ss_pred cCCcEEEEEeC-CCCccCCCCCceEEEEecCCcccCccccCChhhhhhhc-cccccCCeeecCCCCCC
Q 013780 371 VAGVEAQIVSV-DTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLW-GCEHTDSFIRGKDQQTD 436 (436)
Q Consensus 371 ~~~~~v~i~d~-~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~-~~~~~~~~~~tgD~~~d 436 (436)
+|++++||.+. |.+. .+..|||++ + |+++|+.|.+.+ +|+ .+|.++.=||-+|
T Consensus 806 lpgvEvKI~~~~E~~~---~~~~GEIlv-------r--~~kdpe~T~e~~~gW~-~dG~L~IidRkKd 860 (1452)
T PTZ00297 806 APSLQVDLEPFDEPSD---GAGIGQLVL-------A--KKGEPRRTLPIAAQWK-RDRTLRLLGPPLG 860 (1452)
T ss_pred cCceEEEEcccccccC---CCCCCeEEE-------E--ECCChHHHHHhhCcCc-cCCeEEEEecccc
Confidence 99999999973 3222 134699999 3 568999999876 555 3456666666654
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.7e-34 Score=291.57 Aligned_cols=373 Identities=22% Similarity=0.288 Sum_probs=297.6
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 106 (436)
.++.+.+.+++...|++.|++.. +..+||+++..+++++|+.|.+.|+.++++|+++++.+.+++++++|++++|..+
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~y 304 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAY 304 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeE
Confidence 67999999999999999999987 7999999999999999999999999999999999988999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCC
Q 013780 107 STANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPD 186 (436)
Q Consensus 107 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (436)
+|++|.++.+.+.+++++.+++.+++............. +. .......... .....
T Consensus 305 vP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~-------------------~~~~~~~~~~-~~~~~ 360 (642)
T COG1020 305 VPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG----LA-------------------LDDALSEIPD-TDPIP 360 (642)
T ss_pred ecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc----cc-------------------cccccccCCc-cCccc
Confidence 999999999999999999999999998332211111100 00 0000000000 11112
Q ss_pred CCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 187 VSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....+++.++++|||||||.||||.++|+++.+........... ..+++++...++....... .++.++..|+++++
T Consensus 361 ~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~--~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~~ 437 (642)
T COG1020 361 QALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGL--DADDRVLALASLSFDASVF-EIFGALLEGARLVL 437 (642)
T ss_pred ccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCC--CcccEEeecCCcccchhHH-HHHHHHhCCCEEEe
Confidence 33456899999999999999999999999998855444444333 2338888888886666654 79999999999999
Q ss_pred cCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCc--cCCCcceEEEecCCCCcHHHHHHHHhhCC-CCeeee
Q 013780 267 MGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIP-GATIFQ 340 (436)
Q Consensus 267 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~lr~i~~gg~~l~~~~~~~~~~~~~-~~~i~~ 340 (436)
.+. .++..+.+.+.++++|++..+|.++..+........ ...+.+|.+++||+.++.++.+.+.+... ...+.+
T Consensus 438 ~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~ 517 (642)
T COG1020 438 APALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLN 517 (642)
T ss_pred cCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEee
Confidence 964 589999999999999999999999999887732222 22335999999999999999999988764 367888
Q ss_pred ccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhcc
Q 013780 341 VGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWG 420 (436)
Q Consensus 341 ~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~ 420 (436)
.||.||+..................+|+|+++..+.|.| +.++.+|.|..||+++.|..+..| |++.|+.|...|-
T Consensus 518 -~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~g--y~~~p~lt~~~f~ 593 (642)
T COG1020 518 -LYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALG--YLNRPDLTAERFI 593 (642)
T ss_pred -ccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhh--hcCChhhhHHHhh
Confidence 999999655444333221111256899999999999999 699999999999999999999999 9999999999994
Q ss_pred ccccCCeeecCCCCC
Q 013780 421 CEHTDSFIRGKDQQT 435 (436)
Q Consensus 421 ~~~~~~~~~tgD~~~ 435 (436)
.. .+|+|||+++
T Consensus 594 ~~---~~y~tgD~~r 605 (642)
T COG1020 594 AL---RLYRTGDLAR 605 (642)
T ss_pred hc---cCccCCCeee
Confidence 22 3899999875
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=1.4e-27 Score=209.84 Aligned_cols=220 Identities=19% Similarity=0.137 Sum_probs=163.8
Q ss_pred HhhhcccCCCceEEEeC-C---CCccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 33 LFRNSASYSSKLALIDA-D---SDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 33 l~~~~~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
|...++++|+++|++.. + ++.++||+|+.++++++|+.|++ .|+++||+|+|+++|+++++++++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56778889999999753 2 23579999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhhcCCCCCCCCC
Q 013780 108 TANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDV 187 (436)
Q Consensus 108 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (436)
|++ ++++++++++++..+.+.. ......+...... .........++.++.+...... ....+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 144 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-SGEVVALSLDPLG-RRVAGELPPGVIDFAPEVRVHG--DQFAPY 144 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-CCceEEEeccccc-cCCCCCCCCcccchhhhhhccC--CCCCCC
Confidence 995 6789999999887776542 2222222111000 0000001223345555554322 111222
Q ss_pred -CCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 188 -SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 188 -~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
...++|+++++||||+ +|.+++.+. ....+ ..+|+++ .+|++|.+|+.+.++.+|..|+++++
T Consensus 145 ~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l--~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~ 208 (227)
T TIGR03089 145 EPPDATAPALVAGGGEW---------TGAELVAAA----RAAGL--PPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVL 208 (227)
T ss_pred CCCCCCcceeeeccccc---------cHHHHHHHH----hhcCC--CCCCeEE-ecCCCchHHHHHHHHHHhccCceEEE
Confidence 3466899999999985 566665553 22223 2339999 99999999998889999999999999
Q ss_pred cCCCCHHHHHHHHHHhcce
Q 013780 267 MGKFDIEMALRAIEKYRVT 285 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t 285 (436)
.++|++..+++.|+++|+|
T Consensus 209 ~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 209 VTHPDPARLDQIAETERVT 227 (227)
T ss_pred ecCCCHHHHHHHHHhhcCC
Confidence 9999999999999999987
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=1.9e-27 Score=226.18 Aligned_cols=207 Identities=24% Similarity=0.307 Sum_probs=168.3
Q ss_pred CCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEE--
Q 013780 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS-- 266 (436)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~-- 266 (436)
..++++++++|||||||.||+|+++|+++........... . ..+.++..+|++|.+++. .++.++..|+++++
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~--~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~ 106 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--G--GPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELD 106 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--C--CCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecC
Confidence 4568999999999999999999999999988766543322 1 237889999999999986 67788888888877
Q ss_pred -cCCCCHHHHHHHHHHhc--ceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccc
Q 013780 267 -MGKFDIEMALRAIEKYR--VTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGY 343 (436)
Q Consensus 267 -~~~~~~~~~~~~l~~~~--~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~Y 343 (436)
...+++..+++.+++++ .++...+|..+..+...... ..+++++|.+++||+++++++.+++.+. ++++++ .|
T Consensus 107 ~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~-~Y 182 (358)
T PRK07824 107 VSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVR-TY 182 (358)
T ss_pred cCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEe-cc
Confidence 34678999999999998 56677788888777665432 2367899999999999999999999864 599999 99
Q ss_pred cccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChhhhhhhccccc
Q 013780 344 GMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFVFTLFLWGCEH 423 (436)
Q Consensus 344 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~~~~~ 423 (436)
|+||++..+. ..|.|++++++++.| |||+++|+.++.| |+++++.+. +.
T Consensus 183 G~TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~g--Y~~~~~~~~-----~~ 231 (358)
T PRK07824 183 GMSETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKG--YRNPVDPDP-----FA 231 (358)
T ss_pred cCCccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccc--cCCCccccc-----cc
Confidence 9999875432 248899999999944 8999999999999 999887532 23
Q ss_pred cCCeeecCCCCC
Q 013780 424 TDSFIRGKDQQT 435 (436)
Q Consensus 424 ~~~~~~tgD~~~ 435 (436)
.++||+|||+|+
T Consensus 232 ~~g~~~TGDl~~ 243 (358)
T PRK07824 232 EPGWFRTDDLGA 243 (358)
T ss_pred CCCceecccEEE
Confidence 467999999864
No 123
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.95 E-value=1.6e-25 Score=220.18 Aligned_cols=392 Identities=16% Similarity=0.181 Sum_probs=279.9
Q ss_pred CchHHHHhhhcccCCCceEEEeCCC----CccccHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADS----DESLSFSQFKSIVIKVSHSFRHL-GITKKDVVLIFAPNSIHFPICFLGVIA 101 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~-gv~~gd~V~l~~~n~~~~~~~~lA~~~ 101 (436)
.+|.+.|+.+++.+|+.+|+..... +..+||++|.+++.+++..|... -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 7899999999999999999976532 38999999999999999999765 479999999999999999999999999
Q ss_pred hCCeEeecCCCCC------HHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHh
Q 013780 102 IGAIASTANPVYT------VSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLI 175 (436)
Q Consensus 102 ~G~~~v~l~~~~~------~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (436)
+|++++|++|... ...+..+++..++.+|+++.+....++....... .+. ...+-+..+.++.
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~---~~~--------s~~p~i~~~~~~~ 918 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAH---VDQ--------SAIPLILVLPKLP 918 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHH---hhh--------hcchhhhcccccc
Confidence 9999999998643 4678889999999999999887665554421000 000 0000111111111
Q ss_pred ---hhc-----CCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHH
Q 013780 176 ---ELS-----GSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHV 247 (436)
Q Consensus 176 ---~~~-----~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 247 (436)
... ......++-......+|++=+.--++|.--++-.+|..+++.++.+...+.+... .-++...+.+..
T Consensus 919 ~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~--rpl~~~~~~~sG 996 (1363)
T KOG3628|consen 919 ETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKS--RPLLGCSSPYSG 996 (1363)
T ss_pred hhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccC--CceEEEecCccc
Confidence 100 0001112233456788999998889999999999999999999998888887655 667777777778
Q ss_pred HHHHHHHHhhccCCcEEEEcCC----CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcc------eEEEec
Q 013780 248 FGLSVILYDQLQKGNCVVSMGK----FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSL------KLVGSG 317 (436)
Q Consensus 248 ~g~~~~~~~~l~~G~~v~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~l------r~i~~g 317 (436)
.|+..+.+...+.|.+-++.++ -+|..++..++++++.-++.+-..+..+.+....+..+++.. ..++..
T Consensus 997 lgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~ 1076 (1363)
T KOG3628|consen 997 LGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPA 1076 (1363)
T ss_pred hhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeec
Confidence 8888888999999988777754 389999999999999999999988888877554433333222 334444
Q ss_pred CCCCcHHHHHHHHhhCCCCee-----eeccccccccCCcccccCCCCC------c------cC-------------cCcc
Q 013780 318 AAPLGKELMEDCQKNIPGATI-----FQVGYGMTETCAPISLENPLVG------V------RR-------------SGSA 367 (436)
Q Consensus 318 g~~l~~~~~~~~~~~~~~~~i-----~~~~YG~tE~~~~~~~~~~~~~------~------~~-------------~~~~ 367 (436)
-++....+.+.|.+.|....+ .. .|++-=--.++........ + .+ ....
T Consensus 1077 ~~RPr~ali~sf~klfa~igLsp~avSt-sys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dS 1155 (1363)
T KOG3628|consen 1077 EERPRIALIASFKKLFAAIGLSPRAVST-SYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDS 1155 (1363)
T ss_pred CCccHHHHHHHHHHHHHHcCCChhhhcc-cccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccC
Confidence 566667777777776642322 33 4443322222222111100 0 00 0123
Q ss_pred ccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcccCccccCChh-hhhhhc------cccccCCeeecCCCC
Q 013780 368 GTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVTPGIVYINFFV-FTLFLW------GCEHTDSFIRGKDQQ 434 (436)
Q Consensus 368 G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~g~~Y~~~~~-~~~~~~------~~~~~~~~~~tgD~~ 434 (436)
|+..+++++.|++||+..+|.+|+.||||+.|.+-+.+ |++..+ .....| |...+..|.||||+|
T Consensus 1156 G~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~--~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LG 1227 (1363)
T KOG3628|consen 1156 GKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASC--SFTIGDELRSNHFNARLSSGDLLGKSYARTGDLG 1227 (1363)
T ss_pred CcccccceeEEeCCccccccccCCcceEEecccccccc--ccccCchhhhhhhhhhccccccccccceeeeeee
Confidence 77779999999999999999999999999999999988 876322 222222 555566899999987
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.93 E-value=3.9e-25 Score=214.53 Aligned_cols=203 Identities=19% Similarity=0.213 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~ 268 (436)
..++++.+++||||||.||+|.++|.++..+...........+. .+|++++..++.+..+.+...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678899999999999999999999987665444333322222 23788776655443343334566788899998887
Q ss_pred CCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccC--CCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccc
Q 013780 269 KFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFD--ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMT 346 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~--l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~t 346 (436)
..++..+++.|+++++|+++++|+++..|++.....+.+ ..++|.+++||+++++++.+.+++.|+ +++++ .||+|
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~-~YG~t 230 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATD-IYGLS 230 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEe-cccch
Confidence 778899999999999999999999999988764433322 358999999999999999999999997 99999 99999
Q ss_pred ccCCc-ccccCCCCCccCcCcccccc--CCcEEEEEeCCCCccCCCCCceEEEEecC
Q 013780 347 ETCAP-ISLENPLVGVRRSGSAGTLV--AGVEAQIVSVDTLKPLPPNQLGEIWVRGP 400 (436)
Q Consensus 347 E~~~~-~~~~~~~~~~~~~~~~G~p~--~~~~v~i~d~~~~~~~~~g~~Gel~v~g~ 400 (436)
|+++. +...+.. . ..|.++ +++.++|+|+++++++++|+.|||++++.
T Consensus 231 E~~~~~~~~~~~~---~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~ 281 (422)
T TIGR02155 231 EVIGPGVAMECVE---T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL 281 (422)
T ss_pred hhcCCceeecccc---c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC
Confidence 98532 2222111 1 123333 45788999988999999999999999874
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.89 E-value=2.7e-22 Score=194.96 Aligned_cols=201 Identities=20% Similarity=0.195 Sum_probs=152.5
Q ss_pred CCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhHHHHHHHHHHHHhhccCCcEEEE
Q 013780 188 SVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVS 266 (436)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~ 266 (436)
....++++.+.+||||||.||+|.+||.++...+......+...+. ++|+++...+..+..+.....+.++..|++++.
T Consensus 82 ~~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~ 161 (445)
T TIGR03335 82 SADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIP 161 (445)
T ss_pred cCCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEc
Confidence 3456788999999999999999999999998766554444322222 238888888887766665455677888888765
Q ss_pred cCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCcc--CCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccc
Q 013780 267 MGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKF--DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYG 344 (436)
Q Consensus 267 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~--~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG 344 (436)
... ....++.|+++++|++.++|+.+..|++.....+. ...++|.+++||+++++++.+.+.+.|+ +++++ .||
T Consensus 162 ~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~-~YG 237 (445)
T TIGR03335 162 EGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG-CEVYN-TYG 237 (445)
T ss_pred CCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEe-cCC
Confidence 442 35678999999999999999998888765433332 2468999999999999999999999997 99999 999
Q ss_pred ccccCCcccccCCCCCccCcCcccccc--CCcEEEEEeCCCCccCCCCCceEEEEecCC
Q 013780 345 MTETCAPISLENPLVGVRRSGSAGTLV--AGVEAQIVSVDTLKPLPPNQLGEIWVRGPN 401 (436)
Q Consensus 345 ~tE~~~~~~~~~~~~~~~~~~~~G~p~--~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~ 401 (436)
+||++. +. .+ .. ..|..+ +.+.++|+|++++.++++|+.|||++.+-.
T Consensus 238 ~TE~~~-~~-~c-----~~--~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~ 287 (445)
T TIGR03335 238 STEGTM-CG-EC-----QA--VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLL 287 (445)
T ss_pred hhhhhh-eE-Ee-----cC--CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecC
Confidence 999852 21 11 11 123333 567899999988899999999999998753
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.87 E-value=1.6e-21 Score=185.03 Aligned_cols=171 Identities=17% Similarity=0.108 Sum_probs=138.0
Q ss_pred CCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCC
Q 013780 192 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFD 271 (436)
Q Consensus 192 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~ 271 (436)
+..++++|||||||.||+|.+||+++..++..............+++++.+|++|.+|+...++.++..|+++++.++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 56899999999999999999999999988776666554433322689999999999998767888999999999998889
Q ss_pred HHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCc
Q 013780 272 IEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAP 351 (436)
Q Consensus 272 ~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~ 351 (436)
+..+++.++.+ |+++++|.+++.|.+.. ..++++|. ++||+++++++.+.+++. +...+++ .||+||++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~-~YG~TEt~~i 245 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLE-VYGATETGGI 245 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhh-eecccccccc
Confidence 98888888754 89999999999997753 34677886 678999999999999986 4257888 9999999876
Q ss_pred ccccCCCCCccCcCccccccCCcEEEE
Q 013780 352 ISLENPLVGVRRSGSAGTLVAGVEAQI 378 (436)
Q Consensus 352 ~~~~~~~~~~~~~~~~G~p~~~~~v~i 378 (436)
++... ++..|.|+|++++++
T Consensus 246 ~~~~~-------~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 246 GLREA-------PDDPFRLLPDLACFA 265 (386)
T ss_pred ccccC-------CCCCcccCCCccccC
Confidence 54321 234577888887654
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.75 E-value=4.6e-17 Score=151.09 Aligned_cols=209 Identities=22% Similarity=0.184 Sum_probs=160.9
Q ss_pred CCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcE
Q 013780 185 PDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNC 263 (436)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 263 (436)
.......+++..|-.||||||+|+.+.+|+..+...+..++..+...+... |++....-..-..|-...-+.+-.-|++
T Consensus 83 ~~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~ 162 (438)
T COG1541 83 GDFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGAT 162 (438)
T ss_pred ccccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEE
Confidence 344556677777999999999999999999999998888888877765543 6555554422222222233444446777
Q ss_pred EEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCc--cCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeec
Q 013780 264 VVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRK--FDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQV 341 (436)
Q Consensus 264 v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~--~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~ 341 (436)
++-..+-+.+.-++++..+++|++.++|+.+..|++.....+ ..-.+||.+++|+|+++++..+.+.+.|+ +.+++
T Consensus 163 vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~d- 240 (438)
T COG1541 163 VIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFD- 240 (438)
T ss_pred EEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceee-
Confidence 766666688999999999999999999999999998877664 33458999999999999999999999998 99999
Q ss_pred cccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecC
Q 013780 342 GYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGP 400 (436)
Q Consensus 342 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~ 400 (436)
.||+||..+.....+.. ..-.-..-+...++|+||++|+.+++|+.|||.+.+=
T Consensus 241 iYGltE~~g~g~~eC~~-----~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L 294 (438)
T COG1541 241 IYGLTEGFGPGAGECTE-----RNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTL 294 (438)
T ss_pred ccccccccCCccccccc-----ccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEec
Confidence 99999997775222221 1112223477889999999999999999999999774
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.71 E-value=2.6e-16 Score=155.95 Aligned_cols=397 Identities=18% Similarity=0.175 Sum_probs=265.1
Q ss_pred CCCCCCcceeecCCCCCcCCCCCC---CchHHHHhhhcccCCCceEEEeCCCC---ccccHHHHHHHHHHHHH-HHHhcC
Q 013780 3 KSGYGRDGIYRSLRPPLVLPSDPS---FSMVHFLFRNSASYSSKLALIDADSD---ESLSFSQFKSIVIKVSH-SFRHLG 75 (436)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~---~ti~~~l~~~~~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~-~L~~~g 75 (436)
++...+++|-+-+..+...++... -.+..+++..-..++...|.++-++. ..+||..+..++.++|+ .|.+-|
T Consensus 67 k~~~~~p~i~~~~~~~~~ntsss~~a~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksg 146 (1363)
T KOG3628|consen 67 KLQFTEPRIARFPINDPRNTSSSMMALTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSG 146 (1363)
T ss_pred ccccccccccccccCCCCCCchhhhhhcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccC
Confidence 444555665554443333333221 34666777777788888888766543 68999999999999999 777889
Q ss_pred CCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccC
Q 013780 76 ITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSK 153 (436)
Q Consensus 76 v~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 153 (436)
+.++|+|.++...+ .++++..++|..+|.+++|+.+..+.+++..+++....+++++.....+.+.....+...
T Consensus 147 l~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~---- 222 (1363)
T KOG3628|consen 147 LKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSL---- 222 (1363)
T ss_pred CCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccH----
Confidence 99999999999865 899999999999999999999999999999999999999999887654443332200000
Q ss_pred CccccccccccCcccchhhHHhhhcCCCCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc---
Q 013780 154 DKVSSSGLISRSSKIVSFHDLIELSGSVTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL--- 230 (436)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~--- 230 (436)
...-.+....++-.... .+....+...-. .++|-||.+++|.--+++.+|. ++.+-+........
T Consensus 223 ---------~k~v~~w~t~~~k~~~~-~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa 290 (1363)
T KOG3628|consen 223 ---------AKAVAWWKTNDFKGNYT-KDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPA 290 (1363)
T ss_pred ---------HHHHHhhhcccccceee-hhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChH
Confidence 00000000000000000 000111111122 8999999999999889999988 55543332221111
Q ss_pred --------------cC-CCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCC---CCHHHHHHHHHHhcceEEEecHH
Q 013780 231 --------------VG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 231 --------------~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~---~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
.+ ...+.++.........|++..++.++..|.|...+++ ..|..+.+.+-+++++++..--.
T Consensus 291 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~ 370 (1363)
T KOG3628|consen 291 RFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYA 370 (1363)
T ss_pred HHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeeccc
Confidence 11 1126677777778888999899999999999998876 68899999999999999887655
Q ss_pred HHHHHHhc----c-------ccCccCCCcceEEEecCCCCcHHHHHHH----HhhCC------------------CCeee
Q 013780 293 IILALAKN----S-------LVRKFDISSLKLVGSGAAPLGKELMEDC----QKNIP------------------GATIF 339 (436)
Q Consensus 293 ~~~~l~~~----~-------~~~~~~l~~lr~i~~gg~~l~~~~~~~~----~~~~~------------------~~~i~ 339 (436)
.+.+.... + .....++++||.+++.-..++.+..+.. .+-++ ++.+.
T Consensus 371 ~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is 450 (1363)
T KOG3628|consen 371 GLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPIS 450 (1363)
T ss_pred ccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEE
Confidence 54443322 1 1122568899999998888886654433 33222 22222
Q ss_pred eccccccccCCcccccCCCCCc----------------------------cCcCccccccCC-cEEEEEeCCCCccCCCC
Q 013780 340 QVGYGMTETCAPISLENPLVGV----------------------------RRSGSAGTLVAG-VEAQIVSVDTLKPLPPN 390 (436)
Q Consensus 340 ~~~YG~tE~~~~~~~~~~~~~~----------------------------~~~~~~G~p~~~-~~v~i~d~~~~~~~~~g 390 (436)
+=+..|.+......+....+ .....+|+..|| +.+.|+++++...|.++
T Consensus 451 --~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~ 528 (1363)
T KOG3628|consen 451 --FKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD 528 (1363)
T ss_pred --eccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC
Confidence 22345655544443331110 111235665555 57788899999999999
Q ss_pred CceEEEEecCCcccCccccCChhhhhhhc
Q 013780 391 QLGEIWVRGPNVTPGIVYINFFVFTLFLW 419 (436)
Q Consensus 391 ~~Gel~v~g~~~~~g~~Y~~~~~~~~~~~ 419 (436)
++|||||.+++...+ ||.-+..|...|
T Consensus 529 eVGEIwVsS~~~~~~--~~al~~~t~~~F 555 (1363)
T KOG3628|consen 529 EVGEIWVSSNSLGKL--FYALDKQTENTF 555 (1363)
T ss_pred cceeEEEecCCcccc--eeeccccccceE
Confidence 999999999999999 999888888877
No 129
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=8.2e-16 Score=156.62 Aligned_cols=313 Identities=18% Similarity=0.151 Sum_probs=194.2
Q ss_pred chHHHHhhhcccCCCceEEEeCC----CC--ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 013780 28 SMVHFLFRNSASYSSKLALIDAD----SD--ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIA 101 (436)
Q Consensus 28 ti~~~l~~~~~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~ 101 (436)
++..-+.+.+...|+..+..+.. .+ ..+||++....++.+++.|...|...|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 45556777788888877775331 12 7899999999999999999999999999999999999999999999999
Q ss_pred hCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhhcCCCcEEeccCCccccccccccCcccchhhHHhhh-cCC
Q 013780 102 IGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDKVSSSGLISRSSKIVSFHDLIEL-SGS 180 (436)
Q Consensus 102 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 180 (436)
+|..+++++|.++.-+....+.+......-........+...... ..+. .....+...++.+.. ...
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~-----~~~~-------~~~~sv~~~~~~f~~~~~~ 184 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDIL-----LNSL-------FPKLSVETIADSFQMVLHN 184 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHH-----hhcc-------ccccchhhccchhhhhhcc
Confidence 999999999999921111111111111111101111111000000 0000 000001111111111 111
Q ss_pred CCCCCCCCCCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhH-HHHHHHHHHHHhhcc
Q 013780 181 VTDIPDVSVKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPM-FHVFGLSVILYDQLQ 259 (436)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~g~~~~~~~~l~ 259 (436)
..........++..+++.||||+||.||+|..+|..+.+.-........... .+.+-..... ++..-. -++...+.
T Consensus 185 ~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~--s~~~~~~~~~~~~d~i~-~~~~~~L~ 261 (1032)
T KOG1178|consen 185 EDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTG--SDRFTFKTSVYFDDTIQ-KFIGALLF 261 (1032)
T ss_pred CCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCc--cchhhhhheeecccchH-HHHhhHhh
Confidence 1233344556777999999999999999999999998776333222211111 1332111111 121111 13344455
Q ss_pred CCcEEEEcCC---CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccC----------c---cCCCcceEEEecCCCCcH
Q 013780 260 KGNCVVSMGK---FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVR----------K---FDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 260 ~G~~v~~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----------~---~~l~~lr~i~~gg~~l~~ 323 (436)
.|+.+..+.. -++..+...+++++++.++.+|++.++++...... . ...+.|+....+|++...
T Consensus 262 ~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v 341 (1032)
T KOG1178|consen 262 NGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLV 341 (1032)
T ss_pred cCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccch
Confidence 5555555532 34799999999999999999999988887654431 1 122489999999999999
Q ss_pred HHHHHHHhhCCCCeeeeccccccccCCcccccC
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETCAPISLEN 356 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~ 356 (436)
++...+-..+...-... -|+.++..+...+..
T Consensus 342 ~l~~s~~~~~~~~~~~~-~y~s~~~~~~~s~~~ 373 (1032)
T KOG1178|consen 342 SLYTSTFDLLAEIFFGL-PYLSTDPTGLVSYDD 373 (1032)
T ss_pred hhhhhhhhcccceeeee-cccCCCCccceeHHh
Confidence 99986666665233333 689998887776543
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.26 E-value=8.5e-11 Score=112.30 Aligned_cols=145 Identities=16% Similarity=0.089 Sum_probs=98.1
Q ss_pred EEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC--CcEEEe-chhHHHHHHHHHHHHhhccCC-cEEEEcC-C
Q 013780 195 AALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL--DHVVLC-VLPMFHVFGLSVILYDQLQKG-NCVVSMG-K 269 (436)
Q Consensus 195 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~--~~~~~~-~~p~~~~~g~~~~~~~~l~~G-~~v~~~~-~ 269 (436)
..+..||||||.|-.+..+..................+.. +.+.+. ..+. +.+ ..+... ..+...+ .
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly-------~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY-------QSVNNRWISLDFFDLL 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH-------HHHHhccceeeecCCC
Confidence 3455799999999999999887654433322222221111 122222 2221 111 111111 1122221 2
Q ss_pred CCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccC
Q 013780 270 FDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETC 349 (436)
Q Consensus 270 ~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~ 349 (436)
.+.+.+++.|++++|+++.++|+.+..|++.....+.+ .+++.++++||+++++..+.+++.|+ +++++ .||+|| |
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~-~YG~tE-g 249 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQ-IYQATE-G 249 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeE-ccCCch-h
Confidence 46889999999999999999999999999876554434 47999999999999999999999998 99999 999999 5
Q ss_pred Cc
Q 013780 350 AP 351 (436)
Q Consensus 350 ~~ 351 (436)
.+
T Consensus 250 ~l 251 (430)
T TIGR02304 250 FL 251 (430)
T ss_pred he
Confidence 43
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.94 E-value=8.6e-08 Score=89.70 Aligned_cols=204 Identities=19% Similarity=0.166 Sum_probs=124.8
Q ss_pred CCCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccC---CCCcEEEechhHHH----HHHHHHHHHhhccCC
Q 013780 189 VKQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVG---ELDHVVLCVLPMFH----VFGLSVILYDQLQKG 261 (436)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~----~~g~~~~~~~~l~~G 261 (436)
...+++..++.||||||+|--+.+.+..+..+...+........ ..+..++...|... +.......+..+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34567888999999999987677766666665544443333211 11123333222211 111111233334466
Q ss_pred cEEEEc-CCCCHHHHHHHHH----HhcceEEEecHHHHHHHHhccccCcc--CCC-cceEEEecC------CCCc-HHHH
Q 013780 262 NCVVSM-GKFDIEMALRAIE----KYRVTVWWVVPPIILALAKNSLVRKF--DIS-SLKLVGSGA------APLG-KELM 326 (436)
Q Consensus 262 ~~v~~~-~~~~~~~~~~~l~----~~~~t~l~~~p~~~~~l~~~~~~~~~--~l~-~lr~i~~gg------~~l~-~~~~ 326 (436)
+...+- ..++...++..+. +.++..+++.|.++..+.......+. .|+ ..+++-.|| +.++ +++.
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 665553 3467777776664 45789999999877776654443333 343 466777776 4464 6888
Q ss_pred HHHHhhCCC---CeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCccCCCCCceEEEEecCCcc
Q 013780 327 EDCQKNIPG---ATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLKPLPPNQLGEIWVRGPNVT 403 (436)
Q Consensus 327 ~~~~~~~~~---~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~ 403 (436)
+.+.+.||- ..+++ .||+||.....+..... . ...|-- |.|+|+++.++++.|++|-|.+-++...
T Consensus 246 ~~l~~~~Gv~~~~~i~~-~ygmtEl~s~~~~~~~~---~------~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~ 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYD-MYGMTELNSQAYECGHG---H------FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT 314 (365)
T ss_pred HHHHHHHCCCCHHHeee-eeeccccchhheeCCCC---c------ccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc
Confidence 888888973 37888 99999976543322111 1 122222 7788999999999999999999887533
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=96.59 E-value=0.0069 Score=60.37 Aligned_cols=88 Identities=19% Similarity=0.137 Sum_probs=47.1
Q ss_pred CCcceEEEecCCCCcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCC----
Q 013780 308 ISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDT---- 383 (436)
Q Consensus 308 l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~---- 383 (436)
+++|+.|.+.+.--.....+++++.+|++.++.-.|++||. .+.....+. ....+=.|-.+ -.+.++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~----~~~~~l~~~~~-ffEFip~~~~~~~ 339 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPE----DPGYVLAPDSG-FFEFIPVDEDEQN 339 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CC----C--EEE-TTSS-EEEEEE-STT---
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCC----CCceEeecCCe-EEEEEeccCCccc
Confidence 68999777766666667888888888887777659999994 333322111 11111112222 455555432
Q ss_pred ----C-----ccCCCCCceEEEEecCC
Q 013780 384 ----L-----KPLPPNQLGEIWVRGPN 401 (436)
Q Consensus 384 ----~-----~~~~~g~~Gel~v~g~~ 401 (436)
. ..+..|+.-||.+++.+
T Consensus 340 ~~~~~~~l~~~ele~G~~YelviTt~~ 366 (528)
T PF03321_consen 340 PSEQPKTLLLHELEVGEEYELVITTNS 366 (528)
T ss_dssp ----SSSEEGGG--TT-EEEEEEESTT
T ss_pred ccCCCceecHHHhcCCCeEEEEEeccc
Confidence 1 23667888899998864
No 133
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=96.53 E-value=0.18 Score=50.49 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=33.4
Q ss_pred CCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccccc
Q 013780 307 DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTET 348 (436)
Q Consensus 307 ~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~ 348 (436)
-.++++.|.+...--.......++..+++++++.-.|++||+
T Consensus 291 LWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~ 332 (606)
T PLN02247 291 LWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSEC 332 (606)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccce
Confidence 357888888765555677778888888889888779999995
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=96.28 E-value=0.18 Score=50.54 Aligned_cols=42 Identities=12% Similarity=0.008 Sum_probs=33.3
Q ss_pred CCCcceEEEecCCCCcHHHHHHHHhhCCCCeeeecccccccc
Q 013780 307 DISSLKLVGSGAAPLGKELMEDCQKNIPGATIFQVGYGMTET 348 (436)
Q Consensus 307 ~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~i~~~~YG~tE~ 348 (436)
-.++++.|.+...--.......++..+++++++.-.|++||+
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~ 343 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSEC 343 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccce
Confidence 357888887766556677778888888889998779999995
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.99 E-value=0.081 Score=53.23 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=25.7
Q ss_pred CCCCCeEEEEcCCCCC-CCCcceehhhhHHH
Q 013780 189 VKQTDAAALLYSSGTT-GVSKGVILTHKNFI 218 (436)
Q Consensus 189 ~~~~~~a~i~~TSGtT-G~pK~v~~t~~~l~ 218 (436)
..++.+.+...||||| |.+|-+++|.+.+.
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4567788899999999 89999999997665
No 136
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.64 E-value=0.11 Score=49.66 Aligned_cols=87 Identities=16% Similarity=0.069 Sum_probs=72.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
.-+|..|....+..+|+.|...|..+||+|..+..-+ ..-+-..+|+.++|+.++|+.+... +.-..++++.++.++
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~-~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNT-ERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccH-HHHHHHHHhcCCcEE
Confidence 4699999999999999999999999999999877622 2226788999999999999988433 455678999999999
Q ss_pred EEccchHHHH
Q 013780 131 ITVPELWDKV 140 (436)
Q Consensus 131 i~~~~~~~~~ 140 (436)
.+.+.+.-.+
T Consensus 187 ~~tps~~l~l 196 (438)
T COG1541 187 AATPSYLLYL 196 (438)
T ss_pred EEChHHHHHH
Confidence 9998765443
No 137
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=90.42 E-value=2.7 Score=40.84 Aligned_cols=87 Identities=11% Similarity=0.110 Sum_probs=66.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|..++......+++.+...|+++||++......+. ......+++..+|+.++++++.. .+.+...+++.++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 45788888777777788888889999999887665442 22334677889999999887654 4778889999999999
Q ss_pred EEccchHHHH
Q 013780 131 ITVPELWDKV 140 (436)
Q Consensus 131 i~~~~~~~~~ 140 (436)
+..+..+..+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9998766544
No 138
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=90.35 E-value=3 Score=40.92 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=63.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|..++...+..+++.+...|+++||++.++.+.+.. .....+++..+|+.+++... .+....++++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 468999999988888988888899999999998876543 23456788899998876643 2344677889999998
Q ss_pred EEccchH
Q 013780 131 ITVPELW 137 (436)
Q Consensus 131 i~~~~~~ 137 (436)
+......
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 8776543
No 139
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=84.13 E-value=8.7 Score=38.21 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=72.6
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|+..+...+..+...+ ++++++++...++... .+...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 3456666543222 5689998877666655444 7889999988887543 3455678999999988875
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
+..+.+.+...+++.++.+++..+..+..+..
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 56678889999999999999998887766544
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=82.33 E-value=17 Score=36.21 Aligned_cols=99 Identities=17% Similarity=0.176 Sum_probs=72.0
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEeecCCC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~~~ 112 (436)
++.++++..-+| ..+|+..+...+..... ..+++++|++....+... ..+...++++..|+..+..+..
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~ 242 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF 242 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC
Confidence 345666543223 46899988876666655 447899999988887543 2234455588899998877664
Q ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHHhhc
Q 013780 113 YTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (436)
+.+.+...+++.++..+++.+..+..+...
T Consensus 243 -~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~ 272 (521)
T PRK06187 243 -DPENLLDLIETERVTFFFAVPTIWQMLLKA 272 (521)
T ss_pred -CHHHHHHHHHHhCCeEEEchHHHHHHHHcC
Confidence 888999999999999999998877766543
No 141
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=81.62 E-value=19 Score=36.32 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=71.0
Q ss_pred cCCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeec
Q 013780 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l 109 (436)
..++.+|++..-+| ..+|++.+......... ..++.++|++..++|-. ..+...++..+..|+..+..
T Consensus 180 ~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~ 256 (539)
T PRK06334 180 KDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFA 256 (539)
T ss_pred CCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEe
Confidence 34677777644223 57899888765544433 34678899988887743 33334467778889888776
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
......+.+...+++.++.++...+..+..+.
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 257 YNPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 55577888999999999999999888776553
No 142
>PRK08315 AMP-binding domain protein; Validated
Probab=78.53 E-value=21 Score=36.07 Aligned_cols=85 Identities=13% Similarity=0.144 Sum_probs=64.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|...+...+..+... .+++++|++....+- +..++..+++++..|+..+......+...+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 568888887666655544 478999999887775 344556678889999988866666778888899999999999
Q ss_pred EEccchHHHH
Q 013780 131 ITVPELWDKV 140 (436)
Q Consensus 131 i~~~~~~~~~ 140 (436)
+..+..+..+
T Consensus 294 ~~~P~~~~~~ 303 (559)
T PRK08315 294 YGVPTMFIAE 303 (559)
T ss_pred ecchHHHHHH
Confidence 8887665443
No 143
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=75.55 E-value=15 Score=34.81 Aligned_cols=77 Identities=18% Similarity=0.172 Sum_probs=55.5
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEEEcc----
Q 013780 64 VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITVP---- 134 (436)
Q Consensus 64 ~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi~~~---- 134 (436)
+..+.-.|+.+++++||-|.+ ++..|+...-++...|+.+|.+|-+ .+.+.++..+..- .++|+.-.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 445555667778999996554 5778999999999999999988654 5678888887765 67777543
Q ss_pred -chHHHHhhcC
Q 013780 135 -ELWDKVKDLN 144 (436)
Q Consensus 135 -~~~~~~~~~~ 144 (436)
..++.+.++.
T Consensus 135 ~~dm~~i~~la 145 (374)
T COG0399 135 PCDMDAIMALA 145 (374)
T ss_pred CCCHHHHHHHH
Confidence 2344554443
No 144
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=74.94 E-value=29 Score=33.80 Aligned_cols=86 Identities=14% Similarity=0.229 Sum_probs=66.8
Q ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC--CCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcE
Q 013780 52 DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP--NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (436)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 129 (436)
+..+|--+|.+.+..++..+ |+...+++++-.| +..-.++..+|++..|++.|.-.|.+.+...-..+.+-++..
T Consensus 251 gatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~ 327 (596)
T KOG1177|consen 251 GATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTT 327 (596)
T ss_pred ceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEE
Confidence 37899999999999888866 7666445444333 223446678888999999999899999999999999999999
Q ss_pred EEEccchHHHH
Q 013780 130 VITVPELWDKV 140 (436)
Q Consensus 130 vi~~~~~~~~~ 140 (436)
++..+..+--+
T Consensus 328 l~gtPtM~~Dl 338 (596)
T KOG1177|consen 328 LYGTPTMFVDL 338 (596)
T ss_pred EecChHHHHHH
Confidence 99888655433
No 145
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=74.56 E-value=28 Score=35.34 Aligned_cols=99 Identities=11% Similarity=0.009 Sum_probs=69.9
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecCC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANP 111 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~ 111 (436)
++.++++..-+| ..+|...+...+.... ...+++++|++....+.... +...+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 455666533222 5678887765443333 34578889987766654422 34567888899999888777
Q ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 112 VYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
..+.+.+...+++.++.+++..+..++.+..
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 7888999999999999999998887776643
No 146
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=74.40 E-value=41 Score=33.41 Aligned_cols=86 Identities=16% Similarity=0.160 Sum_probs=67.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
..+|...+...+..+...+ +++++|++...+|.+.. .+..+++++..|+..+..+ ....+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEe
Confidence 6788888887777666544 57889999998886532 3456778899999998664 46788899999999999999
Q ss_pred EccchHHHHhh
Q 013780 132 TVPELWDKVKD 142 (436)
Q Consensus 132 ~~~~~~~~~~~ 142 (436)
..+..+..+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 99887776654
No 147
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=74.21 E-value=20 Score=34.65 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=64.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
..+|++.+...+..+...+ +++++|++....+-.. ..+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 5789999888777766654 7899999988877532 2234567888999998887543 4788889999999999
Q ss_pred EccchHHHHhhc
Q 013780 132 TVPELWDKVKDL 143 (436)
Q Consensus 132 ~~~~~~~~~~~~ 143 (436)
..+..+..+...
T Consensus 203 ~~P~~l~~l~~~ 214 (436)
T TIGR01923 203 LVPTQLNRLLDE 214 (436)
T ss_pred eHHHHHHHHHhC
Confidence 988776655443
No 148
>PLN03051 acyl-activating enzyme; Provisional
Probab=74.14 E-value=31 Score=34.36 Aligned_cols=99 Identities=15% Similarity=0.020 Sum_probs=67.4
Q ss_pred CCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCCC
Q 013780 41 SSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 41 p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 112 (436)
++.++++..-+ +..+|++.+...+.... ...++.++|++....|-+.. .+..+++++..|+..+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 35666654322 25678777655433322 33578889988777664321 234567888999999887655
Q ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 113 YTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
...+.+...+++.++.++...+..+..+..
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 566788899999999999998887766543
No 149
>PRK12583 acyl-CoA synthetase; Provisional
Probab=73.94 E-value=38 Score=34.09 Aligned_cols=85 Identities=20% Similarity=0.266 Sum_probs=63.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|+..+...+..+... .+++++|++....|- ....+..+++++..|+.++..........+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 578888886665555544 378899998887764 355667778888899988755555677888889999999999
Q ss_pred EEccchHHHH
Q 013780 131 ITVPELWDKV 140 (436)
Q Consensus 131 i~~~~~~~~~ 140 (436)
+..+..+..+
T Consensus 296 ~~~P~~~~~l 305 (558)
T PRK12583 296 YGVPTMFIAE 305 (558)
T ss_pred eccHHHHHHH
Confidence 8887665433
No 150
>PLN02736 long-chain acyl-CoA synthetase
Probab=72.04 E-value=58 Score=33.74 Aligned_cols=102 Identities=13% Similarity=0.006 Sum_probs=72.4
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|.+.+...+..++..+.-.+.++ |++...++-..-+. ..+++++..|+.++.. +.+.+..+...+++.+++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l 154 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAI 154 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEE
Confidence 45799999998888877665443333 77776666544332 3578888899888866 56789999999999999999
Q ss_pred EecHHHHHHHHhccccCccCCCcceEEEec
Q 013780 288 WVVPPIILALAKNSLVRKFDISSLKLVGSG 317 (436)
Q Consensus 288 ~~~p~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (436)
++.+..+..+..... .++.++.++.-
T Consensus 155 ~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 155 FCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred EECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 999887766654322 23456655543
No 151
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=71.91 E-value=44 Score=33.85 Aligned_cols=98 Identities=22% Similarity=0.227 Sum_probs=68.8
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC-CcHHHHHHHHHHhCCeEeecCC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANP 111 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~-~~~~~~~lA~~~~G~~~v~l~~ 111 (436)
.++.++++..-+| ..+|...+...+..... ..++.++|++....|-. ...+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4566776533222 56788877655544433 34788999888887743 33334567888889988766 4
Q ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 112 VYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
.+....+...+++.++.++...+..+..+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 578888999999999999999887766554
No 152
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=71.86 E-value=51 Score=31.42 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=72.4
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCCC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 112 (436)
++.++++..-+| ..+|.+.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566666543222 56788888777776665 3467789999888876533 455678888889888877765
Q ss_pred CC--HHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 113 YT--VSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 113 ~~--~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
.. ...+..+++..++..+++.+..++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~ 227 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAA 227 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHH
Confidence 54 6788899999999999999887776654
No 153
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=71.76 E-value=27 Score=33.57 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++. -....+|+.++...+..++..+.-.+.+ ++++....+-.. .+...+++++..|+..+..
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 467888877 2345789999999988888777643433 366666665543 2234688999999988888
Q ss_pred CCCCHHHHHHHHHHhcceEEEe
Q 013780 268 GKFDIEMALRAIEKYRVTVWWV 289 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~ 289 (436)
+......+...+++.+++++++
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccceeEEEE
Confidence 4578899999999999999996
No 154
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=70.42 E-value=35 Score=29.93 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=43.4
Q ss_pred HhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCC
Q 013780 72 RHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNP 127 (436)
Q Consensus 72 ~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~ 127 (436)
...|+.++|++. .+|-.. -+...+++++..|++.+++ +.++++.+-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 456889999999 888543 3445689999999999988 68899988888887665
No 155
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=69.54 E-value=12 Score=35.67 Aligned_cols=66 Identities=20% Similarity=0.274 Sum_probs=46.3
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEEEc
Q 013780 64 VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 64 ~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (436)
...+--.|..+|+++||.|++- ...+....-|+..+|+.+|.+|-+ .+.+.++..+..-. ++|+..
T Consensus 50 t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 50 TSALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 3455566677899999988884 567888899999999999988765 45677777766433 666654
No 156
>PRK06188 acyl-CoA synthetase; Validated
Probab=69.18 E-value=58 Score=32.53 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=65.3
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~ 132 (436)
..+|+..+...+..... ..+++.++++....|-+..+...+++.+..|+..+..+. .....+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQLA---EWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHHh---hcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 56788777765554333 457788999999888776666677888888998887764 56788889999999999998
Q ss_pred ccchHHHHhh
Q 013780 133 VPELWDKVKD 142 (436)
Q Consensus 133 ~~~~~~~~~~ 142 (436)
.+..+..+..
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 8877655543
No 157
>PLN02565 cysteine synthase
Probab=67.45 E-value=47 Score=30.98 Aligned_cols=80 Identities=18% Similarity=0.019 Sum_probs=56.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
-.-||++= -+..+-..+.+.|. .+|....+....+=.-..+.++|..+|+.++.+-|....+.....++..++++++
T Consensus 41 PtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~ 118 (322)
T PLN02565 41 PCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVL 118 (322)
T ss_pred CccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEE
Confidence 44455542 23333333444564 6786655666666677777888888999998888888888889999999999999
Q ss_pred Ecc
Q 013780 132 TVP 134 (436)
Q Consensus 132 ~~~ 134 (436)
+++
T Consensus 119 ~~~ 121 (322)
T PLN02565 119 TDP 121 (322)
T ss_pred eCC
Confidence 885
No 158
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=67.43 E-value=56 Score=32.13 Aligned_cols=97 Identities=12% Similarity=0.137 Sum_probs=68.4
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCCC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 112 (436)
++.++++..-+| ..+|++.+...+..... ..+++++|++...+|-... .+..+++.+..|+.++..+ .
T Consensus 140 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 215 (483)
T PRK03640 140 LDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSAL---NLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-K 215 (483)
T ss_pred CCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHH---hcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-C
Confidence 456666533223 46888877655433333 3588999999998875322 2344677778899988775 4
Q ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 113 YTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
.+..++...+++.++.++...+.....+.
T Consensus 216 ~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 216 FDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 67889999999999999999988776654
No 159
>PRK08308 acyl-CoA synthetase; Validated
Probab=66.60 E-value=72 Score=30.68 Aligned_cols=99 Identities=8% Similarity=0.140 Sum_probs=70.0
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|++.+...+..+...+ ++..+|++...+|.. ..++..+++.+..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4456666543222 5789988877666665544 567888888777754 334556788889999988775
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
. .+.+.+...++..++.+++..+..+..+..
T Consensus 176 ~-~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 176 N-KNPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred C-CCHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 4 567778888999999999988877666544
No 160
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.06 E-value=58 Score=32.71 Aligned_cols=98 Identities=12% Similarity=0.024 Sum_probs=69.9
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.+|++..-+| ..+|+..+...+...... .++.++|++....|-.. .++..+++++..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 4567777644222 568888887766554443 35788998887776432 23456778899999988875
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
..+.+.+...+++.++.++...+.....+.
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll 294 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVDFL 294 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHHHH
Confidence 467788889999999999998887665543
No 161
>PRK08316 acyl-CoA synthetase; Validated
Probab=65.92 E-value=66 Score=31.98 Aligned_cols=85 Identities=9% Similarity=0.133 Sum_probs=62.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|++.+...+.. .....++++++++...+|-.. .+...+++++..|+..++.+. ...+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~~~---~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEYVS---CIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDA-PDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHHHH---HHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecC-CCHHHHHHHHHHhCCeEE
Confidence 56888887655433 344557899999988877542 233456677888999988754 467889999999999999
Q ss_pred EEccchHHHHh
Q 013780 131 ITVPELWDKVK 141 (436)
Q Consensus 131 i~~~~~~~~~~ 141 (436)
++.+..+..+.
T Consensus 265 ~~~P~~~~~l~ 275 (523)
T PRK08316 265 FAPPTVWISLL 275 (523)
T ss_pred EeCHHHHHHHH
Confidence 99887765554
No 162
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=65.63 E-value=77 Score=28.79 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC----CHHHHHHHHHhcCCcEEEEcc
Q 013780 62 SIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY----TVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 62 ~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~~~~~l~~~~~~~vi~~~ 134 (436)
.|+..||+.|++.| -.|.+++......+.. .+...|..+..++-.. ..+++..+++..+++++|+|.
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcC
Confidence 46788999997654 4577777665554433 3357788777775432 345788899999999999996
No 163
>PRK06164 acyl-CoA synthetase; Validated
Probab=65.48 E-value=66 Score=32.26 Aligned_cols=98 Identities=16% Similarity=0.191 Sum_probs=71.6
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC-CcHHHHHHHHHHhCCeEeecCCC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS-IHFPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~-~~~~~~~lA~~~~G~~~v~l~~~ 112 (436)
++.++++..-+| ..+|...+...+..++..+ ++.+++++...+|-+ ...+..+++++..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 466677653223 5688888877776666655 678999999888854 33345678888889888766 45
Q ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 113 YTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
.....+...+++.++.+++..+..+..+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677888899999999999988877765544
No 164
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=65.41 E-value=28 Score=33.26 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=40.1
Q ss_pred HHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEEEc
Q 013780 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 69 ~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (436)
..+...++++||.|++-. +.|.....++...|+.++.++.+ .+.+.++..++. +.++|+..
T Consensus 61 ~~l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 61 MAALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 334455789999887733 45666677778889998887654 345666666543 56666643
No 165
>PLN03052 acetate--CoA ligase; Provisional
Probab=64.81 E-value=55 Score=34.55 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.-..+..+.+ ...+|...+...+..++..+.-.+.+ +|++...+|..--+- ..+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~v--ia~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAV--IIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH--HHHHHHHHcCCEEEeeC
Confidence 457788775433321222 24589999999888887776554333 388888888655443 3688888999888877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
+.+.++.+...+++.++.++++...
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 6788999999999999999988653
No 166
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=64.80 E-value=91 Score=31.37 Aligned_cols=98 Identities=11% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|+..+...+..... ..++++++++....+-.. .++..+++.+..|+.++..+
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAE---RLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHH---HhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 3456666543222 56788887766555443 457888999888887642 24556778889999988764
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
.+..+.+...+++.++.+++..+..+..+.
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 567888899999999999888776665543
No 167
>PRK09274 peptide synthase; Provisional
Probab=64.35 E-value=51 Score=33.18 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=67.8
Q ss_pred CCCeEEEEcCCCC-CCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 191 QTDAAALLYSSGT-TGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 191 ~~~~a~i~~TSGt-TG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
++.++++....++ ....+...+|..++...+..++..+.-.+.+. +++...++-...+ ...+++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEcC
Confidence 4566665433222 12233346899999988888777665443333 7887777655433 34688999999998877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
+......+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 456788888899999999888754
No 168
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=64.18 E-value=64 Score=32.51 Aligned_cols=92 Identities=11% Similarity=0.097 Sum_probs=74.3
Q ss_pred ceehhhhHHHhhhhhHHhhhhccC---CCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcc
Q 013780 209 GVILTHKNFIAASLMISAHQELVG---ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRV 284 (436)
Q Consensus 209 ~v~~t~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~ 284 (436)
+..+|++.+...+.+++..+.-.+ .+.|++...+|-..-+.. ..++++..|+.+.-. +.++..++...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 678999999999998887776432 334999999888776555 577888889888777 56799999999999999
Q ss_pred eEEEecHHHHHHHHhccc
Q 013780 285 TVWWVVPPIILALAKNSL 302 (436)
Q Consensus 285 t~l~~~p~~~~~l~~~~~ 302 (436)
++++.....+..+.+...
T Consensus 121 kiif~d~~~~~~i~~~~~ 138 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEATS 138 (537)
T ss_pred eEEEEcCchHHHHHHHHh
Confidence 999999988888766543
No 169
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=63.85 E-value=75 Score=28.48 Aligned_cols=78 Identities=10% Similarity=0.128 Sum_probs=50.2
Q ss_pred cHHHHHH-HHHHHHHHHHhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHh------C--CeEeecCCCC---CHHHHHHHH
Q 013780 56 SFSQFKS-IVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAI------G--AIASTANPVY---TVSELSKQV 122 (436)
Q Consensus 56 Ty~el~~-~~~~la~~L~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~~~~~l 122 (436)
++..+.+ ..+++.+.+.+.+ +.+|++|+|.+.-+.++++++..+... + ..++-++... ..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3444444 3355666676655 578999999999999999887776443 2 3445555532 344456667
Q ss_pred HhcCCcEEEEc
Q 013780 123 KDSNPKLVITV 133 (436)
Q Consensus 123 ~~~~~~~vi~~ 133 (436)
+..+....+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 77777766654
No 170
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=63.07 E-value=77 Score=31.51 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.... .+. .-.+|...+...+..++..+.-.+. .++++....+-...+- ..+++++..|+.++..
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcC
Confidence 456677665321 111 1247888888877777665533222 2377777766555443 3678899999888877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
+...+..+...+++.+++.++..+.....+
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 556889999999999999999888655443
No 171
>PRK05850 acyl-CoA synthetase; Validated
Probab=62.67 E-value=71 Score=32.39 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=73.2
Q ss_pred CCCCeEEEEcC-CCC-CCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc
Q 013780 190 KQTDAAALLYS-SGT-TGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (436)
Q Consensus 190 ~~~~~a~i~~T-SGt-TG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~ 267 (436)
.++.++++... .+. .|. ...+|+..+...+..++..+.-.+.+++++...++-.. .+...+++++..|+.++..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGL--EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEec
Confidence 45667765432 111 122 24689999988888877766654444588877777554 3334688999999998888
Q ss_pred CC----CCHHHHHHHHHHhcceEEEecHHHHHHHH
Q 013780 268 GK----FDIEMALRAIEKYRVTVWWVVPPIILALA 298 (436)
Q Consensus 268 ~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 298 (436)
++ .....+...|+..++..++..+.....+.
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~ 124 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVT 124 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHH
Confidence 53 35678999999999999999887766553
No 172
>PRK07638 acyl-CoA synthetase; Validated
Probab=62.22 E-value=90 Score=30.75 Aligned_cols=87 Identities=13% Similarity=0.143 Sum_probs=63.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
..+|.+.+...+...+. ..+++++|++....+-.. .++...+..+..|+..+.. +..+..++...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 56788777665554443 446789999888766433 3355666778889998866 457788899999999999999
Q ss_pred EccchHHHHhhc
Q 013780 132 TVPELWDKVKDL 143 (436)
Q Consensus 132 ~~~~~~~~~~~~ 143 (436)
..+..+..+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 998887766543
No 173
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=61.77 E-value=36 Score=32.47 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=39.6
Q ss_pred HHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEEEc
Q 013780 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 71 L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (436)
+...++++||.|.+-. +.+.....++...|+.++.++.+ .+.++++..++. +.++|+..
T Consensus 63 l~~~~~~~Gd~Viv~~---~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 63 ALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHhCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3345778999887744 34556667778889988887643 456777776654 56766643
No 174
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=61.65 E-value=22 Score=28.32 Aligned_cols=42 Identities=12% Similarity=0.052 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCC---CCcHHHHHHHHHHhCCeE
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPN---SIHFPICFLGVIAIGAIA 106 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n---~~~~~~~~lA~~~~G~~~ 106 (436)
..+.+.|.+.||.+++.|.+++.. ......+++++..+|..-
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~ 125 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPD 125 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCC
Confidence 478888999999999999999975 566677778888888653
No 175
>PLN02654 acetate-CoA ligase
Probab=60.75 E-value=67 Score=33.42 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-C
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-G 268 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~ 268 (436)
++.+|++.... ..+ ....+|...|...+..++..+.-.+.+ +|++...+|..--+- ..+++++..|+..+.. +
T Consensus 103 ~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v--~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 103 GDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP--IAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecCC
Confidence 56777764221 111 134689999999988888777654443 388888887755433 3688899999988877 6
Q ss_pred CCCHHHHHHHHHHhcceEEEecHH
Q 013780 269 KFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
.+.++.+...++..++.++++...
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 789999999999999999997654
No 176
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=60.41 E-value=77 Score=29.10 Aligned_cols=65 Identities=15% Similarity=0.017 Sum_probs=48.2
Q ss_pred HHhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 71 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 71 L~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
..+.| +.+|++| +....+-.-..+.+++.++|+.+..+-|....+.....++..++++++++...
T Consensus 48 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 48 AEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 34446 3677766 45555556667777888899998888777666667888999999999998653
No 177
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=59.85 E-value=91 Score=32.78 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=67.9
Q ss_pred CCCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.+|++-.-+ +..+|+..+...+..+... .++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 456667653322 2578988887766655543 478899999888874 3444556788889999988776
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
.......+...+++.++.++...+.....+
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 469 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLGNY 469 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHHHh
Confidence 545556667778888999888776655433
No 178
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=59.81 E-value=1.2e+02 Score=32.02 Aligned_cols=119 Identities=15% Similarity=0.090 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhcc---CCC-C-----------cEEEechhHHHHHHHHHHH
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELV---GEL-D-----------HVVLCVLPMFHVFGLSVIL 254 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---~~~-~-----------~~~~~~~p~~~~~g~~~~~ 254 (436)
.++.+|++....| .+ -..+|.+.+...+..++..+.-. +.. + +++...++-..- +....
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e--w~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN--WLVAD 147 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH--HHHHH
Confidence 3566777643222 11 24688999988888877766521 221 1 556555554332 22367
Q ss_pred HhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecC
Q 013780 255 YDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (436)
Q Consensus 255 ~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg 318 (436)
++++..|+..+.. +.+.++.+...|...++.+++..+.++..+.+... .++.++.++.-+
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~ii~~~ 208 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKLIILD 208 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEEEEEC
Confidence 7888899888777 67899999999999999999998888877765432 245676666543
No 179
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=59.69 E-value=92 Score=30.89 Aligned_cols=99 Identities=17% Similarity=0.120 Sum_probs=68.7
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|++.+...+.... ....+++++|++....+-.. .+...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776543222 5678877766544322 23357899998887776543 33345667788899888877
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
...+.+.+...+++.++.+++..+..+..+
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 767788899999999999999988765543
No 180
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=59.68 E-value=36 Score=27.11 Aligned_cols=48 Identities=17% Similarity=0.119 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecH
Q 013780 244 MFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 244 ~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
-.|..|........-..|-.++... ...++++.+.+.++++.++..+-
T Consensus 14 D~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 14 DCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred ChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 4677777655555566788887775 56789999999999999887664
No 181
>PRK11761 cysM cysteine synthase B; Provisional
Probab=59.66 E-value=69 Score=29.41 Aligned_cols=89 Identities=10% Similarity=0.012 Sum_probs=58.9
Q ss_pred ceEEEeCCCCccccHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 013780 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (436)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 121 (436)
++.+-....+..-||++ +.+..+...+.+.| +.+|+.|.. ...+=.-..+.++|...|..+..+-|....++....
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 34443333334455555 33333333444556 467776544 455556677778888899988888787766788889
Q ss_pred HHhcCCcEEEEcc
Q 013780 122 VKDSNPKLVITVP 134 (436)
Q Consensus 122 l~~~~~~~vi~~~ 134 (436)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 182
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=58.89 E-value=71 Score=33.12 Aligned_cols=96 Identities=10% Similarity=0.003 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-C
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-G 268 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~ 268 (436)
++.+|++.-..+. + ....+|.+.+...+..++..+.-.+.+ +|++...+|..--+-. .+++++..|+..+.. +
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFD 149 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCC
Confidence 4677776532211 1 125689999999988888776554433 3888888887665443 678889999887766 6
Q ss_pred CCCHHHHHHHHHHhcceEEEecH
Q 013780 269 KFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
.+.+..+...++..+++++++..
T Consensus 150 ~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 GYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcc
Confidence 78999999999999999999864
No 183
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.38 E-value=99 Score=31.37 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=67.4
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANP 111 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 111 (436)
.|+.++++..-+| ..+|+..+...+..+. .....++.+++++...+|-... .+...++++..|...+...+
T Consensus 179 ~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 179 DETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred CccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 3456666543222 5678887755443322 1223578889999888875433 23445777888998887766
Q ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 112 VYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 112 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
..+.+.+...+++.++.+++..+..+..+
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 77888999999999999999887665543
No 184
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=58.17 E-value=75 Score=33.30 Aligned_cols=103 Identities=13% Similarity=0.044 Sum_probs=72.4
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|.+.+...+..++..+.-.+.. ++++...++-..-. ....++++..|+.++.. +.+.++.+...|...++.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 4578999988888877765443333 37766666544332 23577888899888866 67789999999999999999
Q ss_pred EecHHHHHHHHhccccCccCCCcceEEEecC
Q 013780 288 WVVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (436)
Q Consensus 288 ~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg 318 (436)
++....+..+.+... .++.++.+++-+
T Consensus 183 i~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 999888777765432 234566655543
No 185
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=58.04 E-value=1.1e+02 Score=30.69 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=68.5
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHH---HHHHHHHHhCCeEeec
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP---ICFLGVIAIGAIASTA 109 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~---~~~lA~~~~G~~~v~l 109 (436)
.++.++++..-+| ..+|...+...+...... .+++++|++...+|-...+- ...++++..|+..++.
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 3456666533222 578888888877665443 47889999988887654332 2467888899998765
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
. ......+...+++.++.++...+..+..+.
T Consensus 257 ~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 287 (536)
T PRK10946 257 P-DPSATLCFPLIEKHQVNVTALVPPAVSLWL 287 (536)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeChHHHHHHH
Confidence 4 446667778899999999998887765553
No 186
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=57.72 E-value=73 Score=32.87 Aligned_cols=98 Identities=12% Similarity=0.089 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.... .+ .....+|++.+...+..++..+.-.+.. +|++...++-.--+- ..+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~--~~-~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD--DP-GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAA--VAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC--CC-CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecC
Confidence 467788775321 11 1245689999999988887776554333 378877776655443 3678899999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
+.+.+..+...++..++..+++...
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 5678899999999999999987543
No 187
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.46 E-value=61 Score=29.95 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=52.8
Q ss_pred HHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 70 SFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 70 ~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
.|++.|+.+|++|+|..--..-++...+|.+ .|..++.++... ..-+..++.++++..+...+..+..
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~ 240 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIM 240 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHH
Confidence 4677899999999999999999998888876 577777776543 3456778999999999776444333
No 188
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=57.45 E-value=72 Score=30.38 Aligned_cols=62 Identities=21% Similarity=0.100 Sum_probs=48.8
Q ss_pred hcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 73 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 73 ~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
+.| +.+|....|....+-.-+.+.++|...|..+..+-|.....+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 57785555556666777778888899999988888877777888999999999999974
No 189
>PRK07788 acyl-CoA synthetase; Validated
Probab=57.09 E-value=57 Score=32.83 Aligned_cols=86 Identities=14% Similarity=0.070 Sum_probs=64.4
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.. ++++...++-.- .+...+++++..|+.++... ......+...+++.++..++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 151 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALV 151 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEE
Confidence 588999988888877766544333 377777665543 33346889999999998884 56889999999999999999
Q ss_pred ecHHHHHHHH
Q 013780 289 VVPPIILALA 298 (436)
Q Consensus 289 ~~p~~~~~l~ 298 (436)
..+.....+.
T Consensus 152 ~~~~~~~~~~ 161 (549)
T PRK07788 152 YDDEFTDLLS 161 (549)
T ss_pred ECchhHHHHH
Confidence 9887666553
No 190
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=56.75 E-value=78 Score=32.78 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=69.5
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-C
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-G 268 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~ 268 (436)
++.+|++.... .| ....+|.+.+...+..++..+.-.+.+ +|++...+|..--+ ...+++++..|+..+.. +
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeCC
Confidence 56777765432 22 134689999999888887776554333 38888888765443 33688999999988777 5
Q ss_pred CCCHHHHHHHHHHhcceEEEecHH
Q 013780 269 KFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
.+.+..+...++..++..+++...
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccc
Confidence 678899999999999999988653
No 191
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=56.48 E-value=1.1e+02 Score=34.20 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=72.6
Q ss_pred cCCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeec
Q 013780 39 SYSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 39 ~~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l 109 (436)
..++.++++-.-+| ..+|.+.+...+..+... .++.++|++...+|- +..+....++.+..|+..+..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 34577777643222 578888887776665543 367889988777764 233444467788899988877
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
+...+.+.+...+++.++.++...+...+.+..
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 766778899999999999999999877765543
No 192
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=55.92 E-value=77 Score=32.58 Aligned_cols=98 Identities=12% Similarity=0.113 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.... .+| ....+|.+.+...+..++..+.-.+.+ +|++...+|..--+ ...+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 467788775322 122 234689999999888887766544333 38888888765543 33678899999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
+.+.+..+...++..+++++++...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5678999999999999999987653
No 193
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=55.80 E-value=1.2e+02 Score=30.18 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=67.8
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHH---HHHHHHHhCCeEeec
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI---CFLGVIAIGAIASTA 109 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~---~~lA~~~~G~~~v~l 109 (436)
.++.+|++-.-+| ..+|...+......... ..++.++|++...+|....+-. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4566676533222 57888887766555443 4577889999888875533322 367788889987765
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
+ ......+...+++.++.++...+..+..+.
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 4 456777888899999999999887766543
No 194
>PLN03102 acyl-activating enzyme; Provisional
Probab=55.65 E-value=1e+02 Score=31.38 Aligned_cols=95 Identities=8% Similarity=0.052 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.- + -.+|...+...+..++..+.-.+.. ++++...+|-.-- +...+++++..|+.++..
T Consensus 27 ~p~~~Al~~~--~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 27 YPNRTSIIYG--K-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred CCCCeEEEEC--C-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeecc
Confidence 4566776641 1 2588999988888877766543332 3777777765443 333678899999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIIL 295 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~ 295 (436)
+..++..+...++..+++.++..+....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (579)
T PLN03102 96 TRLDATSIAAILRHAKPKILFVDRSFEP 123 (579)
T ss_pred ccCCHHHHHHHHhccCCeEEEEChhhHH
Confidence 5568999999999999999998765543
No 195
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=55.52 E-value=1.3e+02 Score=25.73 Aligned_cols=82 Identities=13% Similarity=0.152 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHHH------HHHHhccccCccCCCcceEEEe
Q 013780 244 MFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPII------LALAKNSLVRKFDISSLKLVGS 316 (436)
Q Consensus 244 ~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~------~~l~~~~~~~~~~l~~lr~i~~ 316 (436)
-.|..|........=..|-.+... ....++++.+.++++++.++..+-.+. ..+.+...... ..++++ ++.
T Consensus 95 d~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~-~~~~v~-i~v 172 (197)
T TIGR02370 95 DVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG-YRDSVK-FMV 172 (197)
T ss_pred chhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-CCCCCE-EEE
Confidence 478888865555555678777766 566889999999999999887664322 22222222221 112333 778
Q ss_pred cCCCCcHHHHH
Q 013780 317 GAAPLGKELME 327 (436)
Q Consensus 317 gg~~l~~~~~~ 327 (436)
||.+++++..+
T Consensus 173 GG~~~~~~~~~ 183 (197)
T TIGR02370 173 GGAPVTQDWAD 183 (197)
T ss_pred EChhcCHHHHH
Confidence 88888875433
No 196
>PRK05857 acyl-CoA synthetase; Validated
Probab=55.40 E-value=73 Score=32.03 Aligned_cols=95 Identities=13% Similarity=-0.021 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~ 268 (436)
.++.++++.... ...+|...+...+..++..+.-.+.+ ++++...++-...+- ..+++++..|+..+..+
T Consensus 27 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRCDG-------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeecCC-------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecC
Confidence 466777654322 13589999988888877666543333 377777766555433 36889999999998774
Q ss_pred -CCCHHHHHHHHHHhcceEEEecHHH
Q 013780 269 -KFDIEMALRAIEKYRVTVWWVVPPI 293 (436)
Q Consensus 269 -~~~~~~~~~~l~~~~~t~l~~~p~~ 293 (436)
.+.+..+.+.++..++..++..+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 5678888999999999988887654
No 197
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=54.96 E-value=1.4e+02 Score=30.14 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=75.8
Q ss_pred CCCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.+|++..-+ +..+|++.+...+..+...+... +.+.|++...+|- ..-+...+++.+..|...+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 367777764322 36789999998877777776431 7888888888884 3555556777788999988887
Q ss_pred C-CCCHHHHHHHHHhcCCcEEEEccchHHHHhhc
Q 013780 111 P-VYTVSELSKQVKDSNPKLVITVPELWDKVKDL 143 (436)
Q Consensus 111 ~-~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~ 143 (436)
+ .+..+.+...+...++..+...+.....+...
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~ 281 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN 281 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC
Confidence 5 68888888888888888888877776665444
No 198
>PLN02246 4-coumarate--CoA ligase
Probab=54.68 E-value=98 Score=31.04 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++... + +-.+|+..+...+..++..+...+.++ +++...++-.. .+...+++++..|+..+..
T Consensus 36 ~~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCC
Confidence 35667765321 1 235899999888888777665443333 77777665543 3334678888899888877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
+......+...++..++..++........+
T Consensus 107 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PFYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 456788999999999999998876655443
No 199
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=54.66 E-value=1.2e+02 Score=30.90 Aligned_cols=86 Identities=16% Similarity=0.159 Sum_probs=62.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|...+...+..+... .+++++|++...+|-.. .++..+++++..|+..+.. +......+...+++.++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALR-RKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEc-CCCCHHHHHHHHHHhcceEE
Confidence 578998888777766554 47889999988887643 3334555666777776654 56777888888899999998
Q ss_pred EEccchHHHHhh
Q 013780 131 ITVPELWDKVKD 142 (436)
Q Consensus 131 i~~~~~~~~~~~ 142 (436)
...+.....+..
T Consensus 293 ~~~p~l~~~l~~ 304 (600)
T PRK08279 293 QYIGELCRYLLN 304 (600)
T ss_pred eehHHHHHHHHh
Confidence 877766555443
No 200
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=54.65 E-value=1.2e+02 Score=34.42 Aligned_cols=98 Identities=18% Similarity=0.151 Sum_probs=69.8
Q ss_pred CCCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHH-HHHHHHHHhCCeEeecCC
Q 013780 40 YSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP-ICFLGVIAIGAIASTANP 111 (436)
Q Consensus 40 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~-~~~lA~~~~G~~~v~l~~ 111 (436)
.|+.+|++-.-+ +..+|.+.+......... ..+++++|+++...+-+.+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN---HYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 466777754322 257888877665544443 457889999999888765543 346777889999988765
Q ss_pred C--CCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 112 V--YTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 112 ~--~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
. ...+.+...+++.++.++...+..+..+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 4 4677888999999999998887766544
No 201
>PLN03013 cysteine synthase
Probab=54.27 E-value=91 Score=30.34 Aligned_cols=65 Identities=18% Similarity=0.052 Sum_probs=50.5
Q ss_pred HHhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 71 FRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 71 L~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
+.+.| +++|....|....+=.-+.+.++|...|..++.+-|....++....++..+++++++++.
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 34455 478855556666666777778888889998888877777788889999999999999754
No 202
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=54.19 E-value=89 Score=32.42 Aligned_cols=94 Identities=16% Similarity=0.107 Sum_probs=69.1
Q ss_pred CCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CC
Q 013780 192 TDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GK 269 (436)
Q Consensus 192 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~ 269 (436)
++++++.... +|. ...+|.+.+...+..++..+.-.+.+ +|++...+|..--+-. .+++++..|+..+.. +.
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCCC
Confidence 5666665422 222 24689999999988888777654433 3888888887654433 678888999887777 56
Q ss_pred CCHHHHHHHHHHhcceEEEecH
Q 013780 270 FDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 270 ~~~~~~~~~l~~~~~t~l~~~p 291 (436)
+.+..+...+++.++.++++..
T Consensus 173 ~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 173 FGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CCHHHHHHHHHhcCCcEEEEcc
Confidence 7899999999999999998754
No 203
>PLN02574 4-coumarate--CoA ligase-like
Probab=54.18 E-value=1.1e+02 Score=31.00 Aligned_cols=99 Identities=21% Similarity=0.222 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc-cCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~ 267 (436)
.++.++++... ++ ..+|...+...+..++..+.- .+.+ +|++...++-... +...++.++..|+.++..
T Consensus 52 ~~~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSS---TG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECC---CC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCc
Confidence 44566766422 22 247888888888888776654 3333 3888877765543 334678899999988877
Q ss_pred C-CCCHHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 G-KFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 ~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
. .....++...+++.++..++..+..+..+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4 56788999999999999998888766554
No 204
>PRK07529 AMP-binding domain protein; Validated
Probab=54.11 E-value=80 Score=32.60 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~ 268 (436)
.++.+|++....+.. ..+...+|.+.+...+..++..+.-.+.. ++++...+|-..-+ ...+++++..|..+.+.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCC
Confidence 456777766533221 12345789999988888877666543333 37887777755543 235777788885443346
Q ss_pred CCCHHHHHHHHHHhcceEEEec
Q 013780 269 KFDIEMALRAIEKYRVTVWWVV 290 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~ 290 (436)
...+..+...+++.++.+++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 6789999999999999999885
No 205
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=53.96 E-value=65 Score=22.59 Aligned_cols=66 Identities=9% Similarity=0.179 Sum_probs=50.9
Q ss_pred ccccHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcE
Q 013780 53 ESLSFSQFKSIVIKVS---HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKL 129 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la---~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 129 (436)
...||+||.+.-+.++ +.|.+..++..|.|+|+-=++-.. ..++.++...+.++++..+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 4678999887766554 456677889999999987776432 35667888889999999999988876
No 206
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=53.32 E-value=56 Score=32.67 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=63.7
Q ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC--CCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 54 SLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP--NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
.+|.......+.-+. .-.|+++.|+|-+.+| ++.-.++-+.+|+..|+++| |...+++..+=.-..+.++.++-
T Consensus 261 vith~r~~~~a~g~~---~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 261 VITHLRYLQGAAGFY---YVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHHHHHHHHHH---HHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 455555444443333 3459999999999999 78888999999999999987 66888988887878888888877
Q ss_pred EccchHHHHhhc
Q 013780 132 TVPELWDKVKDL 143 (436)
Q Consensus 132 ~~~~~~~~~~~~ 143 (436)
.=.+..+-+...
T Consensus 337 YIGElcRYLl~~ 348 (649)
T KOG1179|consen 337 YIGELCRYLLNQ 348 (649)
T ss_pred hHHHHHHHHHcC
Confidence 655555544333
No 207
>PRK13388 acyl-CoA synthetase; Provisional
Probab=52.90 E-value=1e+02 Score=30.93 Aligned_cols=96 Identities=11% Similarity=-0.055 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCC--CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGE--LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
++.+|++.. +..+|+..+...+..++..+.-.+. +.+++...++-..-+ ...+++++..|+.++..
T Consensus 15 p~~~Al~~~---------~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~ 83 (540)
T PRK13388 15 DDTIAVRYG---------DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLN 83 (540)
T ss_pred CCceEEEEC---------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEec
Confidence 567776542 2367999998888887766655443 336776666544432 33678899999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
+.+....+...+.+.+++.++........+
T Consensus 84 p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 113 (540)
T PRK13388 84 TTRRGAALAADIRRADCQLLVTDAEHRPLL 113 (540)
T ss_pred ccCChHHHHHHHHhcCCCEEEEChhhhHHH
Confidence 456788999999999999999877655433
No 208
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=52.47 E-value=1.2e+02 Score=27.93 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=48.2
Q ss_pred HHHhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 70 SFRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 70 ~L~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
.+.+.|. .+|+.| +....+-.-..+.++|..+|..++.+-|..........++..++++++++..
T Consensus 48 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 48 DAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3444453 677766 4555566667777788889998888877766667778899999999998864
No 209
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=52.16 E-value=72 Score=30.48 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=40.6
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEE
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi 131 (436)
..+...|...++++||.|.+-. ..|.....++...|+.++.++.+ .+.+.++..++. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444455566788999877643 34555566777889988877542 356777776653 456665
No 210
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=51.92 E-value=1.4e+02 Score=29.53 Aligned_cols=58 Identities=21% Similarity=0.252 Sum_probs=37.9
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCC---CCCHHHHHHHHHhcCCcEEEEccch
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP---VYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
+++||.|++=-| ++.. +.-++-..|+.+++++. .+..+.++..++.-+++++++.+.+
T Consensus 176 ~~pGd~v~vE~P-tY~~--~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDP-TYPG--ALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCC-CcHH--HHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 457887776332 4444 44444445555554444 3568899999998899999998754
No 211
>PRK07787 acyl-CoA synthetase; Validated
Probab=51.45 E-value=1.8e+02 Score=28.48 Aligned_cols=97 Identities=20% Similarity=0.202 Sum_probs=68.0
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPN--SIHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++-.-+| ..+|+..+...+..+... .++.++|++...+|- ...++..+++.+..|+.++...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4556666533222 567888888776666554 367888987766653 2345666888999999998775
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
. ...+.+...++ .++..+...+..+..+.
T Consensus 203 ~-~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 R-PTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred C-CCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 4 56788888888 89998888877665554
No 212
>PRK07470 acyl-CoA synthetase; Validated
Probab=50.99 E-value=1.6e+02 Score=29.44 Aligned_cols=101 Identities=20% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecC-CC
Q 013780 41 SSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN-PV 112 (436)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~-~~ 112 (436)
++.++++..-+| ..+|...+...+......+. .++.++|++..++|-+..+-...+..+..|...+.++ ..
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~ 240 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSER 240 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccC
Confidence 456666544323 56788777543322111111 2567889998888866544444444455666665554 35
Q ss_pred CCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 113 YTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 113 ~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
.+.+.+...+++.++.++...+..+..+..
T Consensus 241 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 241 FDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred cCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 678889999999999999999888776643
No 213
>PRK05852 acyl-CoA synthetase; Validated
Probab=50.89 E-value=2.6e+02 Score=27.90 Aligned_cols=87 Identities=11% Similarity=0.203 Sum_probs=62.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeec-CCCCCHHHHHHHHHhcCCcE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTA-NPVYTVSELSKQVKDSNPKL 129 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l-~~~~~~~~~~~~l~~~~~~~ 129 (436)
..+|+..+...+..+...+ +++++|++....|-. ..++..+++++..|...+.- ....+...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 5678888877666655444 678899888877754 34555677888888775542 23456778888899999999
Q ss_pred EEEccchHHHHhh
Q 013780 130 VITVPELWDKVKD 142 (436)
Q Consensus 130 vi~~~~~~~~~~~ 142 (436)
++..+..+..+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9998887766543
No 214
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=50.50 E-value=1.1e+02 Score=30.86 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++.... +..+|+..+...+..++..+.-.+..+ +++...++-...+- ..+++++..|+..+..
T Consensus 41 ~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCC
Confidence 456777653221 246899999888888877665443333 77776665555432 3678889999988766
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILA 296 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~ 296 (436)
+......+...+++.++..++.....+..
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhh
Confidence 45577889999999999999877655443
No 215
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=50.43 E-value=1.6e+02 Score=32.90 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=69.7
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++-.-+| ..+|.+.+...+....+.+ +++++|++...+|-. ..+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI---DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh---CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4566776543222 5688888877766665544 678899998888753 233355677788899988776
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
.....+.+...+++.++.++...+...+.+.
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 5556667778889999999998877665543
No 216
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=50.04 E-value=1.4e+02 Score=30.56 Aligned_cols=101 Identities=24% Similarity=0.324 Sum_probs=70.7
Q ss_pred ccCCCceEEEeC-------CCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHH-HHHHHhCCeEeec
Q 013780 38 ASYSSKLALIDA-------DSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICF-LGVIAIGAIASTA 109 (436)
Q Consensus 38 ~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~-lA~~~~G~~~v~l 109 (436)
...|+..|.+.. .+|.-+||+-|...+..+...+. -++++|++.-++|-+.-+=-++ .++...+.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 456777777533 22478999999999999988875 3789999999999542222222 4444444443333
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 110 NPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
..+.+.+..-++..+|.+++.-+...+.+..
T Consensus 265 --~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~ 295 (613)
T COG1022 265 --KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYK 295 (613)
T ss_pred --cCCHHHHHHHHHHhCCeEEeechHHHHHHHH
Confidence 3467888899999999999999877766543
No 217
>PLN00011 cysteine synthase
Probab=49.91 E-value=1.4e+02 Score=27.86 Aligned_cols=64 Identities=14% Similarity=-0.081 Sum_probs=48.2
Q ss_pred HHhcC-CCCC-CEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 71 FRHLG-ITKK-DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 71 L~~~g-v~~g-d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
..+.| +.+| +.|. ....+=.-..+.++|..+|..+..+-|....+.....++..+++++++++.
T Consensus 59 a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33444 5677 5554 456666777778888889999888877766678888999999999998853
No 218
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=49.77 E-value=32 Score=26.22 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
..+...+.+.|+.+++.|.++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777889989999999999887777777777888864
No 219
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=49.54 E-value=94 Score=31.28 Aligned_cols=87 Identities=11% Similarity=-0.017 Sum_probs=65.1
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.+ .+++....+-...+ ...+++++..|+.++.. +......+...+++.+++.++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~ 123 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLV 123 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEE
Confidence 588899988888877766543333 36777666655544 33688999999988877 567889999999999999999
Q ss_pred ecHHHHHHHHh
Q 013780 289 VVPPIILALAK 299 (436)
Q Consensus 289 ~~p~~~~~l~~ 299 (436)
........+.+
T Consensus 124 ~~~~~~~~~~~ 134 (542)
T PRK06155 124 VEAALLAALEA 134 (542)
T ss_pred EChhhHHHHHH
Confidence 98877665543
No 220
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=49.40 E-value=1.1e+02 Score=25.08 Aligned_cols=92 Identities=13% Similarity=0.115 Sum_probs=68.1
Q ss_pred HHhhccCCcEEEEcCCCCHHHHHHHHHHh-cceEEEecHHHHHHHHhccccCccCCCcceEEEecCCC-------CcHHH
Q 013780 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKY-RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP-------LGKEL 325 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~~~~~~~~~~~l~~~-~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~-------l~~~~ 325 (436)
...-+..|.++.+-...+...+.+.|.+. ++|++--...++..|.+.. ..+.++.||.. ..+..
T Consensus 13 A~~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~--------~~~vi~~GG~~~~~~~~~~G~~a 84 (161)
T PF00455_consen 13 AASLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSENP--------NIEVILLGGEVNPKSLSFVGPIA 84 (161)
T ss_pred HHHhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhcC--------ceEEEEeCCEEEcCCCcEECchH
Confidence 34455667888887777889999999887 8888888888888887664 58889999844 33667
Q ss_pred HHHHHhhCCCCeeeeccccccccCCcccc
Q 013780 326 MEDCQKNIPGATIFQVGYGMTETCAPISL 354 (436)
Q Consensus 326 ~~~~~~~~~~~~i~~~~YG~tE~~~~~~~ 354 (436)
.+.+++...+.-++. .-|..+-.++...
T Consensus 85 ~~~l~~~~~d~afi~-~~gi~~~~G~~~~ 112 (161)
T PF00455_consen 85 LEALRQFRFDKAFIG-ADGISEEGGLTTS 112 (161)
T ss_pred HHHHHhhccceEEec-ccEecCCCccccc
Confidence 777777666677777 7787775555443
No 221
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=49.37 E-value=51 Score=27.87 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=43.8
Q ss_pred CchHHHHhhhcccCCCceEEEeCCCC--ccccHHH--HHHHHHHHHHHHHhcCCCCCCEEEEE
Q 013780 27 FSMVHFLFRNSASYSSKLALIDADSD--ESLSFSQ--FKSIVIKVSHSFRHLGITKKDVVLIF 85 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~~~~--~~~Ty~e--l~~~~~~la~~L~~~gv~~gd~V~l~ 85 (436)
....+.+.+.++.+|.....+.++.+ ..-.|.+ =.+|+..++.+|.+.|+.++ +|.+.
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 55677788888999998888887655 3333433 46789999999999998777 66654
No 222
>PRK06839 acyl-CoA synthetase; Validated
Probab=48.89 E-value=2.6e+02 Score=27.45 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=66.3
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|+..+...+... ....++.++|++...+|-... +....++++..|+..+..
T Consensus 147 ~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~- 222 (496)
T PRK06839 147 NESASFIICYTSGTTGKPKGAVLTQENMFWNALNN---TFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVP- 222 (496)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHH---HHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEc-
Confidence 4456666543222 467877765433322 334578899999888775432 233446777888887654
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
.....+++...+++.++.++...+..+..+..
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 254 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQALIN 254 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHHHh
Confidence 45678888899999999999998887766644
No 223
>PRK07798 acyl-CoA synthetase; Validated
Probab=48.30 E-value=1.7e+02 Score=29.10 Aligned_cols=97 Identities=7% Similarity=-0.104 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-C
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-G 268 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~ 268 (436)
++.++++. ++-.+|...+...+..++..+.-.+.+ ++++...++-.. .+...+++++..|+..+.. +
T Consensus 17 p~~~a~~~---------~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~ 85 (533)
T PRK07798 17 PDRVALVC---------GDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNY 85 (533)
T ss_pred CCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCc
Confidence 45667655 123688888888877777666543332 366665554333 2234678888999988877 4
Q ss_pred CCCHHHHHHHHHHhcceEEEecHHHHHHHH
Q 013780 269 KFDIEMALRAIEKYRVTVWWVVPPIILALA 298 (436)
Q Consensus 269 ~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 298 (436)
......+...+++.++..++........+.
T Consensus 86 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 115 (533)
T PRK07798 86 RYVEDELRYLLDDSDAVALVYEREFAPRVA 115 (533)
T ss_pred CCCHHHHHHHHhhcCCCEEEEchhhHHHHH
Confidence 568889999999999999988876554443
No 224
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=48.15 E-value=1.9e+02 Score=26.82 Aligned_cols=61 Identities=11% Similarity=0.093 Sum_probs=46.5
Q ss_pred cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 74 LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 74 ~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
.|..+++.|.... .+-.-..+.++|...|..++.+-|..........++..++++++++..
T Consensus 46 ~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 46 QGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3434466655544 455666777888899999888888877788889999999999999765
No 225
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.82 E-value=1.3e+02 Score=30.22 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=60.1
Q ss_pred ccccHHHHHHHHHHHHHHH-HhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSF-RHLGITKKDVVLIFAPNSIH-FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L-~~~gv~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|...+.... .+..+ ...++.++|++..+.|-... .....++++..|+..+...+....+.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 467766654322 22222 24577889988877764322 233346778899998877777888899999999999999
Q ss_pred EEccchHHHHh
Q 013780 131 ITVPELWDKVK 141 (436)
Q Consensus 131 i~~~~~~~~~~ 141 (436)
...+..+..+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 88877665554
No 226
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=47.56 E-value=2.1e+02 Score=28.16 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=62.4
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEeecCCC--CCHHHHHHHHHhcCCcE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKL 129 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~~~~~l~~~~~~~ 129 (436)
..+|.+.+......+... .++..++++....|.+. ..+..+++++..|+..+..++. .....+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 578888887666554443 47788888887777543 3445677889999999988764 35677888889999999
Q ss_pred EEEccchHHHH
Q 013780 130 VITVPELWDKV 140 (436)
Q Consensus 130 vi~~~~~~~~~ 140 (436)
+...+...+.+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88888766544
No 227
>PRK09188 serine/threonine protein kinase; Provisional
Probab=47.40 E-value=8.5 Score=36.52 Aligned_cols=12 Identities=0% Similarity=0.047 Sum_probs=10.4
Q ss_pred cCCeeecCCCCC
Q 013780 424 TDSFIRGKDQQT 435 (436)
Q Consensus 424 ~~~~~~tgD~~~ 435 (436)
.+|||+|||+|+
T Consensus 207 ~dgW~~TGDlg~ 218 (365)
T PRK09188 207 SRIWLATGKKVY 218 (365)
T ss_pred cCcEEeCCCEEE
Confidence 578999999985
No 228
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.37 E-value=98 Score=31.35 Aligned_cols=97 Identities=19% Similarity=0.110 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.. + -.+|+..+...+..++..+.-.+.+ +|++....+-.... ...+++++..|+.++..
T Consensus 45 ~p~~~a~~~~--~-------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 45 FGDRPALDFF--G-------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred CCCCeEEEeC--C-------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecC
Confidence 3566776542 1 1478999988888777665433322 37777766655543 23678889999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
+.+.+..+...+.+.++.+++.....+..+
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 567899999999999999999887765544
No 229
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=47.28 E-value=98 Score=29.49 Aligned_cols=65 Identities=17% Similarity=0.128 Sum_probs=42.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHh---cCCcEEEE
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKD---SNPKLVIT 132 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~---~~~~~vi~ 132 (436)
..+...+...++++||.|.+-.+ .+.....++...|+.++.++.+ .+.+.++..++. -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPI---TFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCc---chHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 44445555567889998777544 3555566777889888876542 456777777763 35666663
No 230
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=46.90 E-value=44 Score=24.75 Aligned_cols=52 Identities=6% Similarity=0.089 Sum_probs=37.8
Q ss_pred cccHHHHHHH----HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 54 SLSFSQFKSI----VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 54 ~~Ty~el~~~----~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.+.+.++.+. ...+...+...++.+++.|.++|.++.....+...+..+|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556565432 235666777778888999999999988877777888888864
No 231
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=46.62 E-value=1.7e+02 Score=26.68 Aligned_cols=61 Identities=15% Similarity=0.072 Sum_probs=46.5
Q ss_pred hcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 73 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 73 ~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
+.| +.+|+.|.. ...+-.-..+.++|...|..+..+-|....+.....++..++++++++.
T Consensus 52 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 52 KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 345 367776544 5555667777788888999888887777667778899999999999875
No 232
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=46.51 E-value=89 Score=30.59 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=36.7
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC-----CCHHHHHHHHHhcCCcEEEEc
Q 013780 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV-----YTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 75 gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~~~~~l~~~~~~~vi~~ 133 (436)
++++||.|++-. +.|.....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 788999877653 34556667777889988877543 345666666543 56666654
No 233
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=46.29 E-value=15 Score=22.76 Aligned_cols=23 Identities=26% Similarity=0.247 Sum_probs=20.7
Q ss_pred eEEEecCCCCcHHHHHHHHhhCC
Q 013780 312 KLVGSGAAPLGKELMEDCQKNIP 334 (436)
Q Consensus 312 r~i~~gg~~l~~~~~~~~~~~~~ 334 (436)
+++-++|.|++.++...++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 56888999999999999998886
No 234
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=46.04 E-value=2.6e+02 Score=26.23 Aligned_cols=55 Identities=31% Similarity=0.410 Sum_probs=30.0
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC----CCHHHHHHHHHhcCCcEEEEc
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~~~~~l~~~~~~~vi~~ 133 (436)
+++||.|++--| + +.....++...|+.++.++.+ .+.+++...++..++++++..
T Consensus 97 ~~~gd~Vlv~~p-~--y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHP-S--FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCC-C--hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 467777766433 2 233344555567666655432 334566666654466666643
No 235
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=45.86 E-value=73 Score=32.81 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++... ..+|. .-.+|.+.+...+..++..+.-.+.+. |++...+|..--+ ...+++++..|+..+..
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecC
Confidence 35667766532 12222 235899999998888877776544443 8888888776433 33688899999888776
Q ss_pred CCCCHHHHHHHHHHhcceEEEecH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
+.+.+..+...++..++.++++..
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECC
Confidence 567889999999999999998754
No 236
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=45.82 E-value=1.4e+02 Score=30.06 Aligned_cols=86 Identities=12% Similarity=-0.045 Sum_probs=68.2
Q ss_pred eehhhhHHHhhhhhHHhhhhc-cCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQEL-VGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
-.+|.+.|...+..++..+.- .+.++|++...+|+.--+.. .+++++..|+..... +.|.++.+...+.+.++.++
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gvkGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~v 116 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGVKGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVL 116 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEE
Confidence 578999999988888877753 32355999999998776544 688888889876666 78899999999999999999
Q ss_pred EecHHHHHHH
Q 013780 288 WVVPPIILAL 297 (436)
Q Consensus 288 ~~~p~~~~~l 297 (436)
++....++..
T Consensus 117 it~d~~~~~g 126 (528)
T COG0365 117 IADDGTFRNG 126 (528)
T ss_pred EEeccccccc
Confidence 9877666543
No 237
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=45.12 E-value=2.2e+02 Score=25.08 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred HHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 71 L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
+.+.|..+++.|.. ...+-.-..+.++|...|..++.+-|..........++..+++++.++..+
T Consensus 42 a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 42 AEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 33444324555444 444556677777888899888887777777788888999999999998763
No 238
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.08 E-value=1.6e+02 Score=29.83 Aligned_cols=94 Identities=13% Similarity=0.090 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhc-cC-CCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQEL-VG-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
++.+|++. . +..+|+..+...+..++..+.- .+ .+++++...++-..-+- ..+++++..|+..+..
T Consensus 38 p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~--~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 38 ADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP--VAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeecC
Confidence 56677663 1 1358999999988888776642 12 23377777776655433 3678899999888877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIIL 295 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~ 295 (436)
+.+..+.+...+++.++..++.......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhh
Confidence 4568899999999999999988665544
No 239
>PRK07476 eutB threonine dehydratase; Provisional
Probab=44.87 E-value=1.4e+02 Score=27.68 Aligned_cols=53 Identities=11% Similarity=0.033 Sum_probs=41.3
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
+....+=.-..+.++|...|..++.+-|....+.....++..++++++++...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 33355556677788888999988877777777777888999999999998653
No 240
>PRK13391 acyl-CoA synthetase; Provisional
Probab=44.65 E-value=1.8e+02 Score=28.78 Aligned_cols=98 Identities=9% Similarity=0.046 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++...++ -.+|...+...+..+...+.-.+.+ .+++...++-..-+- ..+++++..|+.++..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~--~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL--EVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhccEEeccc
Confidence 4566777665433 2488888888877777666543333 266666655544332 3577889999988877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILA 296 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~ 296 (436)
+..+...+...+++.++..++..+.....
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 45688999999999999999888766543
No 241
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=44.60 E-value=1.3e+02 Score=31.37 Aligned_cols=87 Identities=15% Similarity=0.065 Sum_probs=64.2
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|+..+...+..++..+.-.+.. +|++...++-..-+ ....++++..|+..+.. +.+.+..+...+++.+++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v 153 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIA 153 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEE
Confidence 4589999999888887766543333 37777776654433 23678889999888877 56788999999999999999
Q ss_pred EecHHHHHHHH
Q 013780 288 WVVPPIILALA 298 (436)
Q Consensus 288 ~~~p~~~~~l~ 298 (436)
+.....+..+.
T Consensus 154 ~~~~~~~~~~~ 164 (660)
T PLN02861 154 FVQESKISSIL 164 (660)
T ss_pred EECHHHHHHHH
Confidence 98776655543
No 242
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=44.35 E-value=1.2e+02 Score=34.79 Aligned_cols=99 Identities=14% Similarity=0.008 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG 268 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~ 268 (436)
.++.+|++...+..........+|++.+...+..++..+.-.+.+ ++++...++-...+ ...+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVID 326 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEeccC
Confidence 467788775432211111234689999999888887766544333 37777776665443 347889999999988885
Q ss_pred C-CCHHHHHHHHHHhcceEEEec
Q 013780 269 K-FDIEMALRAIEKYRVTVWWVV 290 (436)
Q Consensus 269 ~-~~~~~~~~~l~~~~~t~l~~~ 290 (436)
+ ..+..+...++..++..++..
T Consensus 327 p~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 PAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCcHHHHHHHHHhcCCCEEEEe
Confidence 4 567778888888888877764
No 243
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=44.28 E-value=2.7e+02 Score=27.88 Aligned_cols=97 Identities=10% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSI--HFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.+|++-.-+| ..+|...+...+..... ..+++.+|++....|-.. .++..++..+..|...+..
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE---RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh---hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 4566676533222 56788777665554443 346788998888887543 2445567777888877654
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
+.++.+.+...+++.++.++...+..+..+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 466788889999999999998877665544
No 244
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=44.11 E-value=31 Score=23.71 Aligned_cols=31 Identities=32% Similarity=0.276 Sum_probs=18.4
Q ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Q 013780 54 SLSFSQFKSIVIKVSHSFRHLGITKKDVVLI 84 (436)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l 84 (436)
.+.|=+-.-+...+-..|+++|+++||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3344444444555677788999999999877
No 245
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=43.84 E-value=2.5e+02 Score=28.10 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=61.3
Q ss_pred CCCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCCCc-HHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGIT-KKDVVLIFAPNSIH-FPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~-~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.+|++..-+ +..+|++.+...+..+...+ ++. ++|++...+|-... .+..+++++..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV---GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 456677754322 25789988887777665543 667 88988888875432 2345677888899988765
Q ss_pred C-CC--CHHHHHHHHHhcCCcEEEEcc
Q 013780 111 P-VY--TVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 111 ~-~~--~~~~~~~~l~~~~~~~vi~~~ 134 (436)
. .+ ....+...+++.++.++.+..
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p~ 253 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAPN 253 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCCc
Confidence 3 12 355677888888888765443
No 246
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=43.81 E-value=28 Score=23.92 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=16.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEE
Q 013780 65 IKVSHSFRHLGITKKDVVLIF 85 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~ 85 (436)
..+-..|+++|+++||.|-|.
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 43 LGVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CCHHHHHHHcCCCCCCEEEEc
Confidence 335566788999999999874
No 247
>PLN02614 long-chain acyl-CoA synthetase
Probab=43.59 E-value=1.2e+02 Score=31.47 Aligned_cols=87 Identities=13% Similarity=0.016 Sum_probs=64.3
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|+..+...+..++..+.-.+.. +|++...++-..-+ ....++++..|+.++.. +.+.+..+...++..+++++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~v 155 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIV 155 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEE
Confidence 3468999988888877766544333 37777776655433 33678889999888877 56788999999999999999
Q ss_pred EecHHHHHHHH
Q 013780 288 WVVPPIILALA 298 (436)
Q Consensus 288 ~~~p~~~~~l~ 298 (436)
+.....+..+.
T Consensus 156 i~~~~~~~~~~ 166 (666)
T PLN02614 156 FVEEKKISELF 166 (666)
T ss_pred EECHHHHHHHH
Confidence 99877655543
No 248
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=43.59 E-value=1.2e+02 Score=29.69 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=18.5
Q ss_pred HHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 013780 99 VIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~ 133 (436)
+.+.|+.+..++...+.++++..++. +.++|+.+
T Consensus 121 l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 121 LRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred HHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 34556666666655555555555543 34555544
No 249
>PLN02479 acetate-CoA ligase
Probab=43.32 E-value=2.4e+02 Score=28.49 Aligned_cols=95 Identities=12% Similarity=0.047 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++. +. ..+|...+...+..++..+.-.+.++ |++...++-.-.+ ...+++++..|+..+..
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEec
Confidence 456677764 11 25788999888888877775443333 7777766654432 33678888999888777
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIIL 295 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~ 295 (436)
+.+....+...+++.++..++..+..+.
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 129 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFFT 129 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhhh
Confidence 4568899999999999999998776543
No 250
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=43.20 E-value=39 Score=28.70 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=28.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLI 84 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l 84 (436)
..+||.++.+.+.++|..+.+.|.+|.-.|+|
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 56899999999999999999999988765555
No 251
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=43.07 E-value=3.1e+02 Score=26.29 Aligned_cols=83 Identities=16% Similarity=0.235 Sum_probs=52.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCC--CCCEEEEEcCCCC--cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCc
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGIT--KKDVVLIFAPNSI--HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPK 128 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~--~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 128 (436)
..+|.+.+...+..+++.+ ++. +.+++..++|-.. -++..++..+..|+.++.... .+...+...++.. .
T Consensus 113 V~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t 186 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-APASGIMRHARPG--D 186 (386)
T ss_pred eEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-CChHHHHHhhccC--C
Confidence 6789999988888777765 443 3456777777542 233445666778998887653 4544444433321 5
Q ss_pred EEEEccchHHHHh
Q 013780 129 LVITVPELWDKVK 141 (436)
Q Consensus 129 ~vi~~~~~~~~~~ 141 (436)
+++..+..++.+.
T Consensus 187 ~~~~~P~~l~~l~ 199 (386)
T TIGR02372 187 LIVGTPFIWEQLA 199 (386)
T ss_pred EEEECcHHHHHHH
Confidence 6666666665553
No 252
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=42.91 E-value=2.2e+02 Score=26.16 Aligned_cols=61 Identities=13% Similarity=0.048 Sum_probs=45.1
Q ss_pred hcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 73 HLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 73 ~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
+.| +++|+.| |=...+---+...+.|...|..++.+=|..-..+.+.+|+..++++++++.
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 346 7899833 333333455666677777898888777776667888999999999999997
No 253
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=42.58 E-value=2e+02 Score=26.22 Aligned_cols=64 Identities=11% Similarity=0.001 Sum_probs=47.6
Q ss_pred HhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 72 RHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 72 ~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
.+.|. ++|+.|. ....+-.-..+.++|.++|..++.+-|..........++..++++++++...
T Consensus 45 ~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 45 EKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 34453 3566554 4566667777888888999988888777666777788999999999998754
No 254
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=42.51 E-value=40 Score=30.68 Aligned_cols=53 Identities=6% Similarity=0.148 Sum_probs=43.8
Q ss_pred ccccHHHHHH-----HHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 53 ESLSFSQFKS-----IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 53 ~~~Ty~el~~-----~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4577777763 2466777788889999999999999999999999999989985
No 255
>PLN02550 threonine dehydratase
Probab=42.47 E-value=3.6e+02 Score=27.62 Aligned_cols=60 Identities=22% Similarity=0.138 Sum_probs=44.3
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (436)
..+| . +....+=....+.++|.++|+.+..+=|...+......++..+++++++...+.+
T Consensus 156 ~~~G-V--V~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~de 215 (591)
T PLN02550 156 LDKG-V--ICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDE 215 (591)
T ss_pred CCCC-E--EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 3555 3 3345555666777889999998888778777677778889999999999875433
No 256
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=42.32 E-value=2.1e+02 Score=29.80 Aligned_cols=102 Identities=14% Similarity=-0.006 Sum_probs=68.3
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+... |++...++-..-. ....++++..|+..+.. +.+.++.+...++..+++.++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 4689999888888877665443333 6666666554432 23578888889887766 567899999999999999999
Q ss_pred ecHHHHHHHHhccccCccCCCcceEEEec
Q 013780 289 VVPPIILALAKNSLVRKFDISSLKLVGSG 317 (436)
Q Consensus 289 ~~p~~~~~l~~~~~~~~~~l~~lr~i~~g 317 (436)
.....+..+++... ...+.++.++.-
T Consensus 154 ~~~~~~~~~~~~~~---~~~~~l~~ii~~ 179 (660)
T PLN02430 154 VQDKKIKELLEPDC---KSAKRLKAIVSF 179 (660)
T ss_pred ECHHHHHHHHhhhc---ccCCCceEEEEE
Confidence 98765544433211 123356655543
No 257
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=42.28 E-value=3e+02 Score=28.23 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=70.0
Q ss_pred CCCCeEEEEcC--CCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc
Q 013780 190 KQTDAAALLYS--SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM 267 (436)
Q Consensus 190 ~~~~~a~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~ 267 (436)
.++.++++... .+++|. ...+|+..+...+..++..+.-.-.+++++...++-..- +...+++++..|+.++..
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEec
Confidence 35677766532 112232 236899999888888776664432334888777776643 334688999999988765
Q ss_pred -CC-CC--HHHHHHHHHHhcceEEEecHHHHHHH
Q 013780 268 -GK-FD--IEMALRAIEKYRVTVWWVVPPIILAL 297 (436)
Q Consensus 268 -~~-~~--~~~~~~~l~~~~~t~l~~~p~~~~~l 297 (436)
++ .. ++.+...++..++..++..+..+..+
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 33 22 67888999999999999987765543
No 258
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.94 E-value=3e+02 Score=28.30 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=66.5
Q ss_pred CCCeEEEEcC--CCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 191 QTDAAALLYS--SGTTGVSKGVILTHKNFIAASLMISAHQELVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 191 ~~~~a~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
++.++++... .+..|. ...+|++.+...+..++..+.-...++|++...++-..-+ ...+++++..|+.++..
T Consensus 35 ~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~ 110 (631)
T PRK07769 35 GDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY--LIAFFGALYAGRIAVPLF 110 (631)
T ss_pred CCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH--HHHHHHHHHcCCEEEeeC
Confidence 4566765432 112221 2357999998888887766644323347777777665433 33678899999987755
Q ss_pred CCCC---HHHHHHHHHHhcceEEEecHHHHHH
Q 013780 268 GKFD---IEMALRAIEKYRVTVWWVVPPIILA 296 (436)
Q Consensus 268 ~~~~---~~~~~~~l~~~~~t~l~~~p~~~~~ 296 (436)
.+.. +..+...++..++..++........
T Consensus 111 ~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 142 (631)
T PRK07769 111 DPAEPGHVGRLHAVLDDCTPSAILTTTDSAEG 142 (631)
T ss_pred CCCccchHHHHHHHHHhCCCCEEEEChHHHHH
Confidence 3222 4678888999999999988765443
No 259
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=41.88 E-value=12 Score=17.34 Aligned_cols=9 Identities=56% Similarity=1.010 Sum_probs=6.9
Q ss_pred cccccccCC
Q 013780 342 GYGMTETCA 350 (436)
Q Consensus 342 ~YG~tE~~~ 350 (436)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 589998765
No 260
>PRK07514 malonyl-CoA synthase; Validated
Probab=41.39 E-value=1.4e+02 Score=29.55 Aligned_cols=86 Identities=13% Similarity=0.039 Sum_probs=62.3
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|...+...+..++..+.-.+.. ++++...++-.. .+...+++++..|+..+.. +...+..+...+++.+++.+
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 4688888888877777665443332 377766666553 3334678899999888877 45678899999999999999
Q ss_pred EecHHHHHHH
Q 013780 288 WVVPPIILAL 297 (436)
Q Consensus 288 ~~~p~~~~~l 297 (436)
+..+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887766543
No 261
>PRK08162 acyl-CoA synthetase; Validated
Probab=41.17 E-value=1.1e+02 Score=30.70 Aligned_cols=85 Identities=12% Similarity=0.036 Sum_probs=63.3
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.. .+++...++-..-+ ...+++++..|+..+.. +......+...+++.+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 589999988888877666443333 37777777665533 34678888999888777 456889999999999999999
Q ss_pred ecHHHHHHH
Q 013780 289 VVPPIILAL 297 (436)
Q Consensus 289 ~~p~~~~~l 297 (436)
..+.....+
T Consensus 121 ~~~~~~~~~ 129 (545)
T PRK08162 121 VDTEFAEVA 129 (545)
T ss_pred EccchhhHH
Confidence 888665443
No 262
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=40.49 E-value=46 Score=29.62 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCC--HHHHHHHHH-hcCCcEEEEcc
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT--VSELSKQVK-DSNPKLVITVP 134 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~~~~~l~-~~~~~~vi~~~ 134 (436)
+.+-..+.+.-.-||.-=.+.+|+++.+.+.--++.-++.+-||++|+++ .+.+..+++ ++.++++|.++
T Consensus 96 DE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 96 DELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 44444555555568855567789999999888899999999999999876 466666665 45888888764
No 263
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=40.25 E-value=96 Score=31.92 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++.. +..+|. .-.+|.+.+...+..++..+.-.+.+ +|++...+|..--+- ..+++++..|+..+..
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA--FAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeC
Confidence 3567776643 212222 24579999988888877766544333 388888887655443 3678889999887766
Q ss_pred CCCCHHHHHHHHHHhcceEEEecH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVP 291 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p 291 (436)
+.+.+..+...++..++..+++..
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 567889999999999999998754
No 264
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=40.23 E-value=1.6e+02 Score=29.54 Aligned_cols=78 Identities=15% Similarity=0.165 Sum_probs=58.2
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.+. +++...+|-...+ ...+++++..|+.++.. +......+...++..++.+++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEF--TIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 5799999888887776665444433 7777776655533 34688999999988876 456788899999999999887
Q ss_pred ec
Q 013780 289 VV 290 (436)
Q Consensus 289 ~~ 290 (436)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 74
No 265
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.03 E-value=1.5e+02 Score=29.31 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=62.0
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l 287 (436)
-.+|...+...+..+...+.-.+.+. +++....+-...+- ..++.++..|+.++..+ .+....+...+++.+++.+
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 34788888887777776665443333 77777766654432 36889999999888774 5678888899999999999
Q ss_pred EecHHHHHHH
Q 013780 288 WVVPPIILAL 297 (436)
Q Consensus 288 ~~~p~~~~~l 297 (436)
+........+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 8887665544
No 266
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=39.96 E-value=1.9e+02 Score=28.37 Aligned_cols=61 Identities=15% Similarity=-0.018 Sum_probs=46.4
Q ss_pred hcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 73 HLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 73 ~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
+.|. .+|+.|.- ...+=.-..+.++|.++|..+..+=|....++....++..++++++++.
T Consensus 55 ~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 55 ASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 3454 67776544 4556667777888888999888877766667778899999999999875
No 267
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=39.92 E-value=2.1e+02 Score=25.30 Aligned_cols=92 Identities=16% Similarity=0.180 Sum_probs=64.3
Q ss_pred HHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCC-------CcHHHH
Q 013780 254 LYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAP-------LGKELM 326 (436)
Q Consensus 254 ~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~-------l~~~~~ 326 (436)
...-+.-|.++++-...+...+.+.|.....|++.-.+..+..|... +.++.++.||.. ..+...
T Consensus 87 Aa~lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~ 158 (240)
T PRK10411 87 ALAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLI 158 (240)
T ss_pred HHHhCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHH
Confidence 44455667777777666777788888766788888888888777544 347788888853 346677
Q ss_pred HHHHhhCCCCeeeeccccccccCCcccc
Q 013780 327 EDCQKNIPGATIFQVGYGMTETCAPISL 354 (436)
Q Consensus 327 ~~~~~~~~~~~i~~~~YG~tE~~~~~~~ 354 (436)
+.+++...+.-++. .-|.++.+++...
T Consensus 159 ~~l~~~~~d~afis-~~gi~~~~G~~~~ 185 (240)
T PRK10411 159 SQLKSLEIDLFIFS-CEGIDSSGALWDS 185 (240)
T ss_pred HHHHhcCCCEEEEe-ceeECCCCCcccC
Confidence 77777656677888 8888755554443
No 268
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=39.84 E-value=50 Score=27.49 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=44.1
Q ss_pred CCcEEEEcCCCCHHHHHHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCc-HHHHHHHHhhCCCCee
Q 013780 260 KGNCVVSMGKFDIEMALRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLG-KELMEDCQKNIPGATI 338 (436)
Q Consensus 260 ~G~~v~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~-~~~~~~~~~~~~~~~i 338 (436)
..+.+++++......+.+.+ ..++..-+.-+.++..+.+..... ..++.+.||.+-. ..+.+.+++.+|++.+
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~i 77 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLRI 77 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeEE
Confidence 34555555543344444444 444444455566666676655433 3577778776533 4666688888887777
Q ss_pred ee
Q 013780 339 FQ 340 (436)
Q Consensus 339 ~~ 340 (436)
.-
T Consensus 78 vg 79 (172)
T PF03808_consen 78 VG 79 (172)
T ss_pred EE
Confidence 64
No 269
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=39.65 E-value=88 Score=29.30 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=47.3
Q ss_pred HHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 69 HSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 69 ~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
+.|++.+++||++|+|+.--..-+++..+|-. .|+.++-++-+ ++.....++..++.++...
T Consensus 157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 157 RALKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred eehhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 34666789999999999988888887777764 45877777643 4456667888999999864
No 270
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=39.53 E-value=49 Score=30.82 Aligned_cols=52 Identities=17% Similarity=0.278 Sum_probs=42.4
Q ss_pred cccHHHHHHH------HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 54 SLSFSQFKSI------VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 54 ~~Ty~el~~~------~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.+.|.++.+. ...+...+.++|+.+++.|.++|..+.....+++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667665442 466777788889999999999999999988899999999975
No 271
>PRK05939 hypothetical protein; Provisional
Probab=38.80 E-value=3.1e+02 Score=26.43 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=27.2
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~ 133 (436)
+++||.|++.-+.-......+.++.+.|+.++.++.. ..++++..++. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 4667766553321112222223344567766666543 44555555532 45555554
No 272
>PRK09088 acyl-CoA synthetase; Validated
Probab=38.60 E-value=2.1e+02 Score=28.05 Aligned_cols=94 Identities=10% Similarity=-0.042 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++....| ..+|...+...+..+...+.-.+.. .+++...++-...+- ..+++++..|+..+..
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~--~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLV--ALHFACARVGAIYVPLN 78 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEEeeC
Confidence 3556665543222 3578888888877776655533222 277776666555432 3578888999888877
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
+...+..+...+++.+++.++....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~ 103 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDA 103 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcch
Confidence 4568889999999999999987653
No 273
>PRK13383 acyl-CoA synthetase; Provisional
Probab=38.55 E-value=1.5e+02 Score=29.47 Aligned_cols=86 Identities=13% Similarity=0.059 Sum_probs=61.3
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.. ++++...++-.-.+ ...+++++..|+..+.. +.+....+...+++.++..++
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 478888888887777766543322 36666666533322 23577888889988877 456889999999999999999
Q ss_pred ecHHHHHHHH
Q 013780 289 VVPPIILALA 298 (436)
Q Consensus 289 ~~p~~~~~l~ 298 (436)
..+.....+.
T Consensus 138 ~~~~~~~~~~ 147 (516)
T PRK13383 138 ADNEFAERIA 147 (516)
T ss_pred EchhHHHHHH
Confidence 9887665543
No 274
>PRK06381 threonine synthase; Validated
Probab=38.15 E-value=1.2e+02 Score=28.24 Aligned_cols=88 Identities=10% Similarity=-0.042 Sum_probs=55.2
Q ss_pred ceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 013780 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (436)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 122 (436)
++.+-....+..=||++ +.+..+...+.+.|. +.| +....+-.-..+.++|...|..++.+-|..........+
T Consensus 32 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l 105 (319)
T PRK06381 32 KIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEM 105 (319)
T ss_pred eEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 44444443334445554 222233333344442 344 445566677777888889998888776666656667789
Q ss_pred HhcCCcEEEEccch
Q 013780 123 KDSNPKLVITVPEL 136 (436)
Q Consensus 123 ~~~~~~~vi~~~~~ 136 (436)
+..++++++++..+
T Consensus 106 ~~~GA~V~~~~~~~ 119 (319)
T PRK06381 106 EKYGAEIIYVDGKY 119 (319)
T ss_pred HHcCCEEEEcCCCH
Confidence 99999999998754
No 275
>PRK07867 acyl-CoA synthetase; Validated
Probab=38.06 E-value=3.5e+02 Score=27.05 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=62.6
Q ss_pred CCCceEEEeCCC-------CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADS-------DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+ +..+|.+.+...+..+... .++.++|++...+|-... .+..++..+..|+..+..
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~- 225 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQR---FGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALR- 225 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHh---hCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEec-
Confidence 456666653322 2578888887665555443 477889988877664322 223344556677776554
Q ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Q 013780 111 PVYTVSELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 111 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
+.++.+.+...+++.++.++...+.....+
T Consensus 226 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l 255 (529)
T PRK07867 226 RKFSASGFLPDVRRYGATYANYVGKPLSYV 255 (529)
T ss_pred CCCCHHHHHHHHHHhCCeEEeccHHHHHHH
Confidence 456788888889999999987766555444
No 276
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=37.64 E-value=1.8e+02 Score=28.21 Aligned_cols=55 Identities=13% Similarity=0.139 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeec--CCCCCHHHHHHHHHhcCCcEEE
Q 013780 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA--NPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 77 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~~~~~l~~~~~~~vi 131 (436)
-+|-+|+.+++=.++....+..+..+|+.+... ||..+.+++...|...++.++-
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 368899999999999999999999999987655 7877888888888888888664
No 277
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=37.62 E-value=1.4e+02 Score=30.02 Aligned_cols=95 Identities=14% Similarity=0.079 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhh--ccCCCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 191 QTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQE--LVGELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 191 ~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
++.++++.. | -.+|+..+...+..++..+. ..-.+++++...++-...+ ...+++++..|+..+..
T Consensus 39 ~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 39 ADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY--PIATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEeccC
Confidence 566776642 1 25788899888888776652 2222337777766555433 33678889999998866
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPIILA 296 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~ 296 (436)
+.+....+...+.+.+++.++........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 56688999999999999999987655433
No 278
>PRK13390 acyl-CoA synthetase; Provisional
Probab=36.67 E-value=2.8e+02 Score=27.32 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++... +| -.+|...+...+..++..+.-.+.. ++++...++-...+- ..++.++..|+..+..
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~--~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL--VVLWAALRSGLYITAIN 80 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEeccc
Confidence 45666665432 12 3589999988888887766544333 377777666555432 3678889999988766
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP 292 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~ 292 (436)
+.+.+..+...++..++..+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcch
Confidence 4567888888899888888877554
No 279
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=36.60 E-value=1.7e+02 Score=29.53 Aligned_cols=85 Identities=13% Similarity=0.092 Sum_probs=61.9
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|+.++...+..++..+.-.+.. ++++...++-..-.-. .++.++..|+..+.. +...+..+...+++.+++.+
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~--~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~v 124 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPV--AIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAI 124 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHH--HHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEE
Confidence 3689999988888877765544333 3777666655544333 568889999998877 45678999999999999999
Q ss_pred EecHHHHHH
Q 013780 288 WVVPPIILA 296 (436)
Q Consensus 288 ~~~p~~~~~ 296 (436)
+........
T Consensus 125 i~~~~~~~~ 133 (557)
T PRK07059 125 VVLENFATT 133 (557)
T ss_pred EEchhhHHH
Confidence 987765443
No 280
>PRK06382 threonine dehydratase; Provisional
Probab=36.27 E-value=2.1e+02 Score=27.71 Aligned_cols=54 Identities=19% Similarity=0.135 Sum_probs=41.3
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+....+=.-..+.++|..+|..++.+=|..........++..+++++++...+.
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~ 130 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYD 130 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHH
Confidence 334445556667788889999888887877777778889999999999987543
No 281
>PRK06145 acyl-CoA synthetase; Validated
Probab=35.84 E-value=4.3e+02 Score=25.91 Aligned_cols=86 Identities=14% Similarity=0.191 Sum_probs=60.2
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLV 130 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~v 130 (436)
..+|+..+...+.. .....++..++++....|-... +....++++..|+..+.. +......+...+++.++.++
T Consensus 167 v~~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSID---HVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHHH---HHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 67888887654432 3344588999998887774322 223346667788877665 45678888889999999999
Q ss_pred EEccchHHHHhh
Q 013780 131 ITVPELWDKVKD 142 (436)
Q Consensus 131 i~~~~~~~~~~~ 142 (436)
...+.....+..
T Consensus 243 ~~~P~~~~~ll~ 254 (497)
T PRK06145 243 WMAPVMLSRVLT 254 (497)
T ss_pred EehHHHHHHHHc
Confidence 988877665543
No 282
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=35.31 E-value=2.3e+02 Score=22.54 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 92 FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 92 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
..+....+-..|.-++.+-.+.+.+++.......+|++|....
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 3445556667899999999999999999999999999999764
No 283
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=35.08 E-value=50 Score=32.24 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=52.2
Q ss_pred HHHHHhcCCCCCCEEEEEcC-CCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 68 SHSFRHLGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 68 a~~L~~~gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
++.+.-.|..+...|.+--| -++..+.+=|-=+...+..+|++..+..+.+..+++..+|++++|.+.+.+...
T Consensus 407 ~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~~ 481 (653)
T KOG1138|consen 407 VHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPIP 481 (653)
T ss_pred HHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCCC
Confidence 34444456655555555444 345555555555667788889999999999999999999999999987655443
No 284
>PLN02356 phosphateglycerate kinase
Probab=34.86 E-value=2.4e+02 Score=27.53 Aligned_cols=62 Identities=13% Similarity=-0.092 Sum_probs=45.3
Q ss_pred HHhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEc
Q 013780 71 FRHLGI-TKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITV 133 (436)
Q Consensus 71 L~~~gv-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~ 133 (436)
+.+.|. +++..|. ....+-.-..+.++|...|..++.+-|.....+....++..++++++++
T Consensus 95 a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 95 ALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 334443 3666554 3344445777888888899988888777777777899999999999985
No 285
>PRK06178 acyl-CoA synthetase; Validated
Probab=34.54 E-value=1.7e+02 Score=29.48 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=62.1
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.+ ++++...++-...+ ...+++++..|+..+.. +......+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 578888888877776655433332 36666666555533 23678888889887766 566889999999999999999
Q ss_pred ecHHHHHHHH
Q 013780 289 VVPPIILALA 298 (436)
Q Consensus 289 ~~p~~~~~l~ 298 (436)
+.+..+..+.
T Consensus 136 ~~~~~~~~l~ 145 (567)
T PRK06178 136 ALDQLAPVVE 145 (567)
T ss_pred EccchHHHHH
Confidence 9888765543
No 286
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.47 E-value=3.2e+02 Score=27.36 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=61.7
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCC-CEEEEEcCCC--CcHHHHHHHHHHhCCeEeec
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKK-DVVLIFAPNS--IHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~g-d~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l 109 (436)
.++.++++..-+| ..+|...+...+..+... .++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVA---AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHh---cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 3466666544323 568888887665544443 466666 7888777654 34444566778889988877
Q ss_pred CCCC---CHHHHHHHHHhcCCcEEEEccch
Q 013780 110 NPVY---TVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 110 ~~~~---~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
.+.. ....+..++++.++.++.+....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 256 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFA 256 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHH
Confidence 6532 45567788999999987654433
No 287
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=34.38 E-value=1.9e+02 Score=26.35 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC----------CCHHHHHHHHHh-cCCcEEEEc
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----------YTVSELSKQVKD-SNPKLVITV 133 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~----------~~~~~~~~~l~~-~~~~~vi~~ 133 (436)
+++||.|.+.-+. +...+-++...|+.++.+++. .+.++++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 4789988876443 333455667789888877653 456788887764 467766554
No 288
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=34.27 E-value=1.2e+02 Score=23.06 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCC-CCcHHHHHHHHHHhCCe
Q 013780 66 KVSHSFRHLGITKKDVVLIFAPN-SIHFPICFLGVIAIGAI 105 (436)
Q Consensus 66 ~la~~L~~~gv~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~ 105 (436)
.+.+.+.+.|+.+++.|.+++.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 45555666788899999999988 47777777778888865
No 289
>PRK03321 putative aminotransferase; Provisional
Probab=34.09 E-value=3.1e+02 Score=25.65 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=25.4
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC----CCHHHHHHHHHhcCCcEEEE
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV----YTVSELSKQVKDSNPKLVIT 132 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~~~~~l~~~~~~~vi~ 132 (436)
+++||.|++-.+. +.....++...|+.++.++.+ ...+.+...++. ++++++.
T Consensus 95 ~~~gd~Vli~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~v~l 151 (352)
T PRK03321 95 AGPGDEVIFAWRS---FEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-RTRLIFV 151 (352)
T ss_pred cCCCCEEEeCCCC---HHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-CCCEEEE
Confidence 4677776664332 222233445567665555432 234455444433 4555544
No 290
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=34.04 E-value=1.2e+02 Score=25.48 Aligned_cols=47 Identities=6% Similarity=-0.004 Sum_probs=33.6
Q ss_pred CccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 013780 52 DESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGV 99 (436)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~ 99 (436)
...+|+.|+.+.+.++|..+.+. +.....+.|...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 46789999999999999999874 222234566666666666666654
No 291
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=33.85 E-value=1.9e+02 Score=30.38 Aligned_cols=88 Identities=7% Similarity=-0.041 Sum_probs=64.7
Q ss_pred ceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceE
Q 013780 209 GVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTV 286 (436)
Q Consensus 209 ~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~ 286 (436)
...+|++.+...+..++..+.-.+..+ |++...++-.. .+....++++..|+..+.. +.+.++.+...+++.++..
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 467899999999888887765444333 77766666543 3334678888889877665 5678899999999999999
Q ss_pred EEecHHHHHHHH
Q 013780 287 WWVVPPIILALA 298 (436)
Q Consensus 287 l~~~p~~~~~l~ 298 (436)
+++....+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 998877665554
No 292
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=33.55 E-value=4.1e+02 Score=25.28 Aligned_cols=10 Identities=10% Similarity=0.099 Sum_probs=4.8
Q ss_pred CCCCEEEEEc
Q 013780 77 TKKDVVLIFA 86 (436)
Q Consensus 77 ~~gd~V~l~~ 86 (436)
++||.|++..
T Consensus 125 ~~gd~Vlv~~ 134 (380)
T PLN03026 125 DPGDKIIDCP 134 (380)
T ss_pred CCCCEEEEcC
Confidence 4455544443
No 293
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=33.42 E-value=3.9e+02 Score=24.60 Aligned_cols=71 Identities=11% Similarity=0.126 Sum_probs=48.6
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCc----------------------------HHHHHHHHHHhCCeEe
Q 013780 56 SFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIH----------------------------FPICFLGVIAIGAIAS 107 (436)
Q Consensus 56 Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~----------------------------~~~~~lA~~~~G~~~v 107 (436)
...++.+....+..++++.|+. ..|.|.+-++.. ..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 3444556678888888888764 567776666544 3456788899999999
Q ss_pred ecCCCCCH--HHHHHHHHhcCCc
Q 013780 108 TANPVYTV--SELSKQVKDSNPK 128 (436)
Q Consensus 108 ~l~~~~~~--~~~~~~l~~~~~~ 128 (436)
-..|+... ..+..+.++.++-
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE
T ss_pred eccCccccCCHHHHHHHHHcCCC
Confidence 88887665 6777777776644
No 294
>PRK13382 acyl-CoA synthetase; Provisional
Probab=33.19 E-value=2.6e+02 Score=28.07 Aligned_cols=83 Identities=12% Similarity=-0.002 Sum_probs=60.1
Q ss_pred ehhhhHHHhhhhhHHhhhhccCC-CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+. +++++...++-.-. +...+++++..|+.++... ......+...+++.+++.++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 145 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVI 145 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEE
Confidence 58888888887777766543332 23777776664443 3347889999999988874 56788999999999999998
Q ss_pred ecHHHHH
Q 013780 289 VVPPIIL 295 (436)
Q Consensus 289 ~~p~~~~ 295 (436)
.......
T Consensus 146 ~~~~~~~ 152 (537)
T PRK13382 146 YDEEFSA 152 (537)
T ss_pred EchhhHH
Confidence 8765543
No 295
>PRK10717 cysteine synthase A; Provisional
Probab=33.00 E-value=3e+02 Score=25.68 Aligned_cols=63 Identities=13% Similarity=0.033 Sum_probs=47.2
Q ss_pred HhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 72 RHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 72 ~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
.+.| +++|+.|.. ...+-.-..+.++|.++|..+..+-|....+.....++..++++++++..
T Consensus 56 ~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 56 EKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 3445 466776544 55556677777888889988887777777777889999999999999853
No 296
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=32.31 E-value=1.6e+02 Score=29.51 Aligned_cols=85 Identities=13% Similarity=-0.062 Sum_probs=60.4
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l 287 (436)
..+|...+...+..++..+.-.+... +++...++-..-+- ..++.++..|+..+.. +.+.+..+...+++.++..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 35788999888888777665444333 67766665544333 3577888889888877 45678999999999999999
Q ss_pred EecHHHHHH
Q 013780 288 WVVPPIILA 296 (436)
Q Consensus 288 ~~~p~~~~~ 296 (436)
+........
T Consensus 116 ~~~~~~~~~ 124 (542)
T PRK06018 116 ITDLTFVPI 124 (542)
T ss_pred EEccccHHH
Confidence 876654433
No 297
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=31.82 E-value=4e+02 Score=27.32 Aligned_cols=100 Identities=14% Similarity=0.128 Sum_probs=62.9
Q ss_pred CCCceEEEeCCCC-------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEeecC
Q 013780 40 YSSKLALIDADSD-------ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNS--IHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~v~l~ 110 (436)
.++.++++..-+| ..+|++.+...+..+...+.-.+ ..++++...+|-. ..+...++.++..|+.++..+
T Consensus 207 ~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~-~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~ 285 (614)
T PRK08180 207 GPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLA-EEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDD 285 (614)
T ss_pred CcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccC-CCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeC
Confidence 4566776543222 67899888877666555442111 1456777777643 334456677788899888765
Q ss_pred CCCCH---HHHHHHHHhcCCcEEEEccchHHHH
Q 013780 111 PVYTV---SELSKQVKDSNPKLVITVPELWDKV 140 (436)
Q Consensus 111 ~~~~~---~~~~~~l~~~~~~~vi~~~~~~~~~ 140 (436)
..... .++...++..++.+++..+..+..+
T Consensus 286 ~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l 318 (614)
T PRK08180 286 GKPTPGGFDETLRNLREISPTVYFNVPKGWEML 318 (614)
T ss_pred CCccchhHHHHHHHHHHhCCcEEechHHHHHHH
Confidence 33333 3556677889999998887665544
No 298
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=31.78 E-value=5.1e+02 Score=25.54 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=48.7
Q ss_pred hcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHh
Q 013780 73 HLGITKKDVVLIFAPNSI-HFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVK 141 (436)
Q Consensus 73 ~~gv~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 141 (436)
..++.+++++....+-.. ......+..+..|+..+.. +..+.+.+...+++.++.+++..+..+..+.
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 258 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRLL 258 (509)
T ss_pred hcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHHH
Confidence 457889998887776432 2223334456678887665 4567889999999999999999887766553
No 299
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=31.51 E-value=3.1e+02 Score=27.02 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=44.0
Q ss_pred ccccHHHHHHHHHHH--------------HHHH-HhcCCCCCCEEEEEcCCCCcHHHHHHH-HHHhCCeEeec-------
Q 013780 53 ESLSFSQFKSIVIKV--------------SHSF-RHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTA------- 109 (436)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a~~L-~~~gv~~gd~V~l~~~n~~~~~~~~lA-~~~~G~~~v~l------- 109 (436)
..-||.+|.+.+..+ |..| ...++++||.| + +..++....| +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 455778888776544 3333 34689999964 3 3344444444 78888877633
Q ss_pred -------CCCCCHHHHHHHHHhcC
Q 013780 110 -------NPVYTVSELSKQVKDSN 126 (436)
Q Consensus 110 -------~~~~~~~~~~~~l~~~~ 126 (436)
.-+++.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33467888888887543
No 300
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=31.48 E-value=1.3e+02 Score=27.52 Aligned_cols=64 Identities=28% Similarity=0.190 Sum_probs=51.4
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeec-CCCCCHHHHHHHHHhcCCcEEEEccchHH
Q 013780 75 GITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA-NPVYTVSELSKQVKDSNPKLVITVPELWD 138 (436)
Q Consensus 75 gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (436)
.+++||.|+=-..||.---+.+.-|-..|+-.+-+ .-....+++...|+..+++.||++++..+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 57899999888888877777777777888766544 44456799999999999999999987653
No 301
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.40 E-value=2.3e+02 Score=28.38 Aligned_cols=83 Identities=10% Similarity=-0.013 Sum_probs=58.6
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|+..+...+..++..+.-.+.+ ++++...++-...+ ...+++++..|+..+... ......+...+++.++..++
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii 119 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF--VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVV 119 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEE
Confidence 688899988888777666433332 26665555533332 336788889999888774 45788999999999999998
Q ss_pred ecHHHHH
Q 013780 289 VVPPIIL 295 (436)
Q Consensus 289 ~~p~~~~ 295 (436)
..+....
T Consensus 120 ~~~~~~~ 126 (542)
T PRK07786 120 TEAALAP 126 (542)
T ss_pred EccchHH
Confidence 8776544
No 302
>PRK08813 threonine dehydratase; Provisional
Probab=31.11 E-value=3.8e+02 Score=25.37 Aligned_cols=55 Identities=15% Similarity=-0.037 Sum_probs=42.6
Q ss_pred EEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 83 LIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 83 ~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
.+....+=.-..+.++|..+|..+..+=|....+.....++..+++++.+..++.
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~ 138 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYD 138 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 3455556677778889999998887766766667778888999999999986543
No 303
>PRK06060 acyl-CoA synthetase; Validated
Probab=31.02 E-value=2.1e+02 Score=30.03 Aligned_cols=93 Identities=13% Similarity=0.030 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.++++. + . .+|+..+...+..++..+.-.+... +++...++-...+- ..++.++..|+..+..
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~--~~~la~~~aG~~~vpi~ 86 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLV--QLLLACLARGVMAFLAN 86 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEecC
Confidence 356777652 1 1 4799999888888777665544333 77777766655443 3678889999887776
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHHHH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPPII 294 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~~~ 294 (436)
+......+...+++.++..++......
T Consensus 87 p~~~~~~l~~~l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 87 PELHRDDHALAARNTEPALVVTSDALR 113 (705)
T ss_pred CCCCHHHHHHHHhcCCCcEEEEchHHh
Confidence 455778888888889998888766543
No 304
>PRK09224 threonine dehydratase; Reviewed
Probab=31.00 E-value=3.2e+02 Score=27.39 Aligned_cols=54 Identities=20% Similarity=0.097 Sum_probs=42.1
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
|....+=....+.++|..+|..++.+=|...+......++..+++++++.+.+.
T Consensus 72 V~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~ 125 (504)
T PRK09224 72 ITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFD 125 (504)
T ss_pred EEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHH
Confidence 444556667778888999999888777777767777789999999999986543
No 305
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=30.96 E-value=3.7e+02 Score=25.63 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=42.6
Q ss_pred EEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 83 LIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 83 ~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
.+....+=.-..+.++|.+.|..+..+=|..........++..+++++++...+
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 104 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDY 104 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCH
Confidence 344455566677788899999988888787777778889999999999987643
No 306
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=30.93 E-value=2.7e+02 Score=26.55 Aligned_cols=55 Identities=13% Similarity=0.197 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCC--C----CCHHHHHHHHHhc------CCcEEEEc
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANP--V----YTVSELSKQVKDS------NPKLVITV 133 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~~~~~l~~~------~~~~vi~~ 133 (436)
+++||.|.+.. ..+...+.++...|+.++.++. + .+.+.+...++.. ++++|+.+
T Consensus 99 ~~~gd~Vlv~~---~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDG---LAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECC---CchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 47888877642 2334444567778988887765 2 4567777777643 57777755
No 307
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=30.66 E-value=1.5e+02 Score=21.45 Aligned_cols=49 Identities=8% Similarity=0.054 Sum_probs=30.2
Q ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 54 SLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.+.+.++......+.. +.. +.+++.|.+++..+.....+...+...|..
T Consensus 34 ~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 82 (96)
T cd01529 34 SIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGGK 82 (96)
T ss_pred eCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCCC
Confidence 4556665544444432 222 357788999998877766666666677763
No 308
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=30.58 E-value=1.8e+02 Score=21.81 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=35.1
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeec
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 109 (436)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+...|..-+.+
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 4566665443 3444455667789999999888888888888888766543
No 309
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=30.46 E-value=2.8e+02 Score=22.16 Aligned_cols=92 Identities=8% Similarity=0.087 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhc---CCCCCCEEEE-EcCCCCcH-HHHHHHHHHhCCeEeecCCCCC-------HHHHHHHHHhcCC
Q 013780 60 FKSIVIKVSHSFRHL---GITKKDVVLI-FAPNSIHF-PICFLGVIAIGAIASTANPVYT-------VSELSKQVKDSNP 127 (436)
Q Consensus 60 l~~~~~~la~~L~~~---gv~~gd~V~l-~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~-------~~~~~~~l~~~~~ 127 (436)
+.+++..+-....+. ..-+|..|++ +..+|-.. +..-.|+.++|+.++.+++..+ ..+...++... +
T Consensus 17 ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~ 95 (142)
T PF02729_consen 17 LLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-V 95 (142)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-C
T ss_pred HHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-h
Confidence 445555555555432 2445666665 55566444 4455778899999999986542 46667788888 8
Q ss_pred cEEEEccchHHHHhhcC--CCcEEecc
Q 013780 128 KLVITVPELWDKVKDLN--LPAVLLGS 152 (436)
Q Consensus 128 ~~vi~~~~~~~~~~~~~--~~~~~~~~ 152 (436)
+++++-......+.... ..+.+++.
T Consensus 96 D~iv~R~~~~~~~~~~a~~~~vPVINa 122 (142)
T PF02729_consen 96 DAIVIRHPSHGALEELAEHSSVPVINA 122 (142)
T ss_dssp SEEEEEESSHHHHHHHHHHCSSEEEEE
T ss_pred heEEEEeccchHHHHHHHhccCCeEcC
Confidence 88888765544443332 34555543
No 310
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.17 E-value=2.6e+02 Score=28.16 Aligned_cols=82 Identities=11% Similarity=0.100 Sum_probs=59.1
Q ss_pred eehhhhHHHhhhhhHHhhhhcc-C-CCCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceE
Q 013780 210 VILTHKNFIAASLMISAHQELV-G-ELDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTV 286 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~ 286 (436)
..+|...+...+..++..+.-. + .++|++...++-..-+ ...+++++..|+..+.. +.+....+...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY--PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 3688999988888777666421 2 2337777776655533 34678889999888866 4568899999999999999
Q ss_pred EEecHHH
Q 013780 287 WWVVPPI 293 (436)
Q Consensus 287 l~~~p~~ 293 (436)
++..+..
T Consensus 126 ~i~~~~~ 132 (562)
T PRK12492 126 LVYLNMF 132 (562)
T ss_pred EEecccc
Confidence 8876543
No 311
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=29.34 E-value=2.1e+02 Score=20.22 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=30.0
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 66 KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 66 ~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
.+...+...++.+++.|.+++.+......+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 4445555667888899999998877777777777777766
No 312
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=29.34 E-value=3.1e+02 Score=22.28 Aligned_cols=76 Identities=25% Similarity=0.317 Sum_probs=54.3
Q ss_pred ccCCcEEEEcCCCCHHHH---HHHHHHhcceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCCcHHHHHHHHhhCC
Q 013780 258 LQKGNCVVSMGKFDIEMA---LRAIEKYRVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPLGKELMEDCQKNIP 334 (436)
Q Consensus 258 l~~G~~v~~~~~~~~~~~---~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~ 334 (436)
...|+.+....+||+..+ -+.+++++.+.+-+.+.-|.............+. +. .- .+..+++...+++.
T Consensus 63 ~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~Wrm~~~dY~~~~~~~~~~~~~l~-l~---~v-~p~~~~L~~~m~~~-- 135 (152)
T PF09664_consen 63 AAAGARLYYSGDFDPEGLRIANRLIQRYGARPWRMDAEDYLAALSAEPLSGRRLK-LP---NV-APWLPELAEAMRER-- 135 (152)
T ss_pred HhCCCEEEEecCCCHHHHHHHHHHHHHhCCccccCCHHHHHHhccccCCCCCcCC-cc---cC-ChhcHHHHHHHHHh--
Confidence 456888999999999766 4556788888888999998766665544444443 33 33 68888999988887
Q ss_pred CCeeee
Q 013780 335 GATIFQ 340 (436)
Q Consensus 335 ~~~i~~ 340 (436)
+..+++
T Consensus 136 ~~a~~Q 141 (152)
T PF09664_consen 136 GRAVYQ 141 (152)
T ss_pred CceeeH
Confidence 565554
No 313
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=29.29 E-value=2.4e+02 Score=25.74 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=41.6
Q ss_pred CEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 80 DVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 80 d~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
+.|.. ...+-.-..+.++|...|..++.+-|.....+....++..++++++++.++
T Consensus 66 ~~iv~-~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~ 121 (304)
T cd01562 66 KGVVA-ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDF 121 (304)
T ss_pred CcEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 44444 345666677777888899887777676666677888999999999998753
No 314
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=29.12 E-value=4.5e+02 Score=25.61 Aligned_cols=56 Identities=14% Similarity=0.081 Sum_probs=30.9
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHH----HHHHHHHhcCCcEEEEcc
Q 013780 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVS----ELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 78 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~----~~~~~l~~~~~~~vi~~~ 134 (436)
.|.+|+|+.+.+.-+-++-+- ..+|..++.+-.....+ .++..+.....+.++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L-~elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFV-LENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHH-HHCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 577899988754332222222 36788876555444333 333445555566666654
No 315
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=28.94 E-value=3e+02 Score=24.43 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=55.8
Q ss_pred hhhcccCCCceEEEeC-CC--CccccHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeec
Q 013780 34 FRNSASYSSKLALIDA-DS--DESLSFSQFKSIVIKVSHSFRHLG-ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 34 ~~~~~~~p~~~a~~~~-~~--~~~~Ty~el~~~~~~la~~L~~~g-v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 109 (436)
.+.+-++++...++=. .. .++..+.++...-..+++.|.+.. ..+.+.|.+-+|.... ..+-.++..+-.+.+++
T Consensus 69 ~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~-~~~~~al~~aD~vL~V~ 147 (243)
T PF06564_consen 69 QQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPS-PYTRQALAAADLVLVVV 147 (243)
T ss_pred HHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCc-HHHHHHHHhCCeEEEEe
Confidence 4445667777777643 11 156667777777888899998877 5677888888888644 33455777788888888
Q ss_pred CCCCC
Q 013780 110 NPVYT 114 (436)
Q Consensus 110 ~~~~~ 114 (436)
+|+..
T Consensus 148 ~~Da~ 152 (243)
T PF06564_consen 148 NPDAA 152 (243)
T ss_pred CCCHH
Confidence 88653
No 316
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=28.54 E-value=2.7e+02 Score=27.31 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=45.8
Q ss_pred ccccHHHHHHHHHHH--------------H-HHHHhcCCCCCCEEEEEcCCCCcHHHHHHH-HHHhCCeEeec--C----
Q 013780 53 ESLSFSQFKSIVIKV--------------S-HSFRHLGITKKDVVLIFAPNSIHFPICFLG-VIAIGAIASTA--N---- 110 (436)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a-~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA-~~~~G~~~v~l--~---- 110 (436)
..-||.+|.+.+..+ | +.|...++++||.| .+..++....+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 456888888876554 3 33445689999976 33566666666 68888877766 2
Q ss_pred --------CCCCHHHHHHHHHhc
Q 013780 111 --------PVYTVSELSKQVKDS 125 (436)
Q Consensus 111 --------~~~~~~~~~~~l~~~ 125 (436)
-+.+.+.++..++..
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccc
Confidence 134678888888753
No 317
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=28.32 E-value=2.1e+02 Score=26.58 Aligned_cols=88 Identities=11% Similarity=-0.015 Sum_probs=52.3
Q ss_pred ceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 013780 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (436)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 122 (436)
++.+-....+..-||++ +.+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|..........+
T Consensus 39 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l 112 (324)
T cd01563 39 NLYVKDEGLNPTGSFKD--RGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQA 112 (324)
T ss_pred ceEEEecCCCCcccHHH--hhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHH
Confidence 44444443344444443 22233333333434 4455444 334445555678888898877766665566777889
Q ss_pred HhcCCcEEEEccch
Q 013780 123 KDSNPKLVITVPEL 136 (436)
Q Consensus 123 ~~~~~~~vi~~~~~ 136 (436)
+..++++++++...
T Consensus 113 ~~~GA~Vi~~~~~~ 126 (324)
T cd01563 113 LAYGATVLAVEGNF 126 (324)
T ss_pred HHcCCEEEEECCcH
Confidence 99999999998754
No 318
>PRK12483 threonine dehydratase; Reviewed
Probab=28.28 E-value=4.9e+02 Score=26.22 Aligned_cols=55 Identities=20% Similarity=0.108 Sum_probs=43.4
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (436)
|....+=....+.++|..+|+.++.+=|...+......++..+++++++.+.+.+
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~ 143 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPD 143 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 4455566777788899999999888877777777778899999999999875543
No 319
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.21 E-value=1.9e+02 Score=29.12 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=59.3
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.+ ++++...++-...+ ...+++++..|+..+.. +.+....+...+++.+++.++
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii 126 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVIL 126 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEE
Confidence 478888988888877766443322 37777766665543 23678889999887766 456788899999999999998
Q ss_pred ecHHHH
Q 013780 289 VVPPII 294 (436)
Q Consensus 289 ~~p~~~ 294 (436)
..+...
T Consensus 127 ~~~~~~ 132 (563)
T PRK06710 127 CLDLVF 132 (563)
T ss_pred Eeccch
Confidence 876543
No 320
>PRK06234 methionine gamma-lyase; Provisional
Probab=27.88 E-value=5.5e+02 Score=24.71 Aligned_cols=25 Identities=28% Similarity=0.141 Sum_probs=13.9
Q ss_pred HHHHHHHhhCCCCeeeeccccccccC
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETC 349 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~ 349 (436)
+...+|.+.+.-..+-. ..|.+|+.
T Consensus 324 ~~~~~f~~~l~~~~~~~-s~G~~~sl 348 (400)
T PRK06234 324 EEGKVVMNNVKLATLAV-SLGDAETL 348 (400)
T ss_pred HHHHHHHHhCCcceEec-cCCCCCce
Confidence 33455666554344455 67777764
No 321
>PRK05638 threonine synthase; Validated
Probab=27.51 E-value=2.1e+02 Score=28.04 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=54.3
Q ss_pred ceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHH
Q 013780 43 KLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQV 122 (436)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 122 (436)
+..+-....+-.-||++=. ....+...+ +.| .+.|+. ...+=.-..+.+.+..+|..+..+-|..........+
T Consensus 81 ~l~~K~E~~nPtGSfKdR~-a~~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRL-ATVAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHHH-HHHHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 4444444334566676621 112222233 333 334444 4445555666667778898877776766666777889
Q ss_pred HhcCCcEEEEccchHHH
Q 013780 123 KDSNPKLVITVPELWDK 139 (436)
Q Consensus 123 ~~~~~~~vi~~~~~~~~ 139 (436)
+..+++++.++....+.
T Consensus 155 ~~~GA~vi~v~~~~~~~ 171 (442)
T PRK05638 155 IAFGAKIIRYGESVDEA 171 (442)
T ss_pred HhcCcEEEEECCCHHHH
Confidence 99999999998655443
No 322
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=27.12 E-value=2.3e+02 Score=27.09 Aligned_cols=54 Identities=13% Similarity=0.105 Sum_probs=44.8
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+++.-+-....+.+|+.++|+.+..+=|..++...-..++..++.+++.-....
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 334445577888999999999999999999998888999999999999876543
No 323
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=27.02 E-value=6e+02 Score=24.84 Aligned_cols=85 Identities=13% Similarity=0.128 Sum_probs=60.9
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcH-HHHHHHHHHhCCeEeecCCC--CCHHHHHHHHHhcCCcE
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAIASTANPV--YTVSELSKQVKDSNPKL 129 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~--~~~~~~~~~l~~~~~~~ 129 (436)
..+|+..+...+...+.. .++..++++....|-+... +..+++++..|...+..+.. .....+...++..++.+
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 578898888766655554 4677888888777755332 34556778889988877653 35677778889999999
Q ss_pred EEEccchHHHH
Q 013780 130 VITVPELWDKV 140 (436)
Q Consensus 130 vi~~~~~~~~~ 140 (436)
+...+.....+
T Consensus 238 ~~~~p~~~~~~ 248 (503)
T PRK04813 238 WVSTPSFADMC 248 (503)
T ss_pred EEeChHHHHHH
Confidence 88887766543
No 324
>PRK08246 threonine dehydratase; Provisional
Probab=26.96 E-value=4.6e+02 Score=24.18 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=43.8
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 78 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+++.|.. ...+=.-..+.++|..+|..+..+-|....+.....++..++++++++....
T Consensus 67 ~~~~vv~-aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (310)
T PRK08246 67 PAAGVVA-ASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYA 125 (310)
T ss_pred cCCeEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHH
Confidence 4555544 3445666777788889998888777776667778899999999999987543
No 325
>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=26.89 E-value=2.5e+02 Score=20.31 Aligned_cols=29 Identities=3% Similarity=0.029 Sum_probs=23.1
Q ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 106 ASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 106 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
++.+.|+.+..+....+.+.+.+.+.+-+
T Consensus 52 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 80 (98)
T cd04618 52 LVSIHPERSLFDAALLLLKNKIHRLPVID 80 (98)
T ss_pred eEEeCCCCcHHHHHHHHHHCCCCEeeEEE
Confidence 66788999988888888888877777643
No 326
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=26.85 E-value=2.1e+02 Score=24.52 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHH-hcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 60 FKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 60 l~~~~~~la~~L~-~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
..++.+.++..+. +.+++++|.+.++.. .|..++|+ ++....+..++++|..++-.
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpi-------e~A~~~rekGa~vI~vTSl~ 141 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPI-------EVAEYAREKGAKVIAVTSLD 141 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcch-------HHHHHHHhcCCeEEEEehhh
Confidence 3456666777664 579999996666554 35566665 46677788888888877543
No 327
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.76 E-value=4e+02 Score=22.68 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=53.0
Q ss_pred cEEEechh-HHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEEecHHH------HHHHHhccccCccC
Q 013780 236 HVVLCVLP-MFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWWVVPPI------ILALAKNSLVRKFD 307 (436)
Q Consensus 236 ~~~~~~~p-~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~------~~~l~~~~~~~~~~ 307 (436)
.+++.+.+ -.|..|........-..|-.++.. ....++.+.+.+.+.++.++..+-.+ +..+.+...... .
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~ 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-L 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-C
Confidence 44444444 578888764444445678777755 45688999999999999987755422 222222222111 1
Q ss_pred CCcceEEEecCCCCcHHH
Q 013780 308 ISSLKLVGSGAAPLGKEL 325 (436)
Q Consensus 308 l~~lr~i~~gg~~l~~~~ 325 (436)
...++ ++.||.+++.+.
T Consensus 163 ~~~~~-i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKVK-VMVGGAPVNQEF 179 (201)
T ss_pred CcCCe-EEEECCcCCHHH
Confidence 11333 667777888753
No 328
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=26.61 E-value=2.6e+02 Score=26.77 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=13.6
Q ss_pred HHHHHHHHhhCCCCeeeeccccccccC
Q 013780 323 KELMEDCQKNIPGATIFQVGYGMTETC 349 (436)
Q Consensus 323 ~~~~~~~~~~~~~~~i~~~~YG~tE~~ 349 (436)
.+...+|.+.+.-..+-. .+|.+|+.
T Consensus 310 ~~~~~~~~~~l~l~~~~~-s~G~~~sl 335 (385)
T PRK08574 310 RDAVLKFLRSLKLIKPSP-SLGGVESL 335 (385)
T ss_pred HHHHHHHHHcCCcceEcc-CCCCCcce
Confidence 344555555544233344 66777753
No 329
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=26.39 E-value=2.5e+02 Score=20.19 Aligned_cols=69 Identities=22% Similarity=-0.015 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEE-cCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 60 FKSIVIKVSHSFRHLGITKKDVVLIF-APNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 60 l~~~~~~la~~L~~~gv~~gd~V~l~-~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
=++.+..++..+.... .-+.|.|. ..+-++.+.+.--+.+.++..++++ +.-.+.+...++..+++-++
T Consensus 8 RyeTs~~va~~~~~~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~~v~ 77 (92)
T PF04122_consen 8 RYETSAKVAKKFYPDN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIKKVY 77 (92)
T ss_pred HHHHHHHHHHHhcccC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCCEEE
Confidence 3455566666654322 33444444 3343444444444444578888887 44446666667666544443
No 330
>PRK06721 threonine synthase; Reviewed
Probab=26.35 E-value=2.6e+02 Score=26.37 Aligned_cols=54 Identities=9% Similarity=-0.076 Sum_probs=38.2
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCC-CHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVY-TVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+....+=.-..+.++|...|..++.+-|.. ........++..++++++++....
T Consensus 79 V~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~ 133 (352)
T PRK06721 79 ICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFD 133 (352)
T ss_pred EEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 333444455677778888998877776754 345566688999999999987543
No 331
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=26.34 E-value=4.4e+02 Score=26.41 Aligned_cols=53 Identities=17% Similarity=0.089 Sum_probs=41.6
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
|....+=....+.++|.++|+.++.+=|...+......++..+++++++.+.+
T Consensus 69 V~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~~ 121 (499)
T TIGR01124 69 IAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANF 121 (499)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcCH
Confidence 33455556677788889999988888787777777788999999999997654
No 332
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=26.13 E-value=1.5e+02 Score=27.51 Aligned_cols=48 Identities=17% Similarity=0.164 Sum_probs=35.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCcH-HHHHHHHHHhCCe-EeecCCC
Q 013780 65 IKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAI-ASTANPV 112 (436)
Q Consensus 65 ~~la~~L~~~gv~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~-~v~l~~~ 112 (436)
..|+..|.++|+.++++|.+++.++..+ .-+++.+..+|.. +..++-.
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG 138 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGG 138 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCC
Confidence 6788889999999999999998776544 3445677778874 4455543
No 333
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=26.03 E-value=2.7e+02 Score=27.10 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=56.7
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|+..+...+..++..+.-.+.. .+++....+-...+- ..+++++..|+.++.. +...+..+-..+++.++.+++
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETL--LAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH--HHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 578889988888877665443333 277776665544332 3678889999998888 456778888889999998887
Q ss_pred ecH
Q 013780 289 VVP 291 (436)
Q Consensus 289 ~~p 291 (436)
...
T Consensus 106 ~~~ 108 (458)
T PRK09029 106 VLE 108 (458)
T ss_pred EcC
Confidence 654
No 334
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=25.94 E-value=2.2e+02 Score=29.90 Aligned_cols=58 Identities=19% Similarity=0.157 Sum_probs=39.9
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC---------C-----HHHHHHHHHhc-CCc----EEEEccch
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY---------T-----VSELSKQVKDS-NPK----LVITVPEL 136 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~~~~~l~~~-~~~----~vi~~~~~ 136 (436)
+++||.|+ +-+|+--++. -|+..+|+.+|.+.|.. + .+.++..++.. +++ +||+.+.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~--haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLT--HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHH--HHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 57899665 5667666644 39999999999998864 3 56777766643 233 67766554
No 335
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=25.93 E-value=4.9e+02 Score=25.43 Aligned_cols=46 Identities=4% Similarity=0.032 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCC----HHHHHHHHHh
Q 013780 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT----VSELSKQVKD 124 (436)
Q Consensus 78 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~~~~~l~~ 124 (436)
.|.+|+|+...+..+-++-+- ..+|..++.+-.... .+++..+++.
T Consensus 302 ~gkrv~i~g~~~~~~~la~~L-~elGm~v~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSFL-LELGMEPVHVLTGNGGKRFEKEMQALLDA 351 (435)
T ss_pred CCCEEEEEcChHHHHHHHHHH-HHCCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 578899988765433333333 378988855433222 2345555554
No 336
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=25.83 E-value=2.9e+02 Score=21.34 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=29.5
Q ss_pred cCCCCCCEEEEEcC-CCCcHHHHHHHHHHhCCeEeecCCC
Q 013780 74 LGITKKDVVLIFAP-NSIHFPICFLGVIAIGAIASTANPV 112 (436)
Q Consensus 74 ~gv~~gd~V~l~~~-n~~~~~~~~lA~~~~G~~~v~l~~~ 112 (436)
.|+.+++.|.++|. .+.....+.+.+..+|..+..++-.
T Consensus 81 ~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~~v~~L~GG 120 (128)
T cd01520 81 ARLERDPKLLIYCARGGMRSQSLAWLLESLGIDVPLLEGG 120 (128)
T ss_pred hccCCCCeEEEEeCCCCccHHHHHHHHHHcCCceeEeCCc
Confidence 58999999999996 4677777777777789876555543
No 337
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=25.68 E-value=2.9e+02 Score=24.85 Aligned_cols=55 Identities=13% Similarity=0.092 Sum_probs=43.3
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe--ecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIAS--TANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 77 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
-+|-+|+.|+.=..+..+.+..+..+|+.+. ..||..+.+++...|...++.+.-
T Consensus 41 l~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A 97 (268)
T PF05221_consen 41 LKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFA 97 (268)
T ss_dssp TTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEE
Confidence 3688999999999999999999999998765 567778889999989888876655
No 338
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=25.64 E-value=2.7e+02 Score=26.98 Aligned_cols=57 Identities=5% Similarity=-0.101 Sum_probs=45.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH
Q 013780 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (436)
Q Consensus 82 V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (436)
-.+....+=.-..+.++|..+|..++.+=|.....+....++..++++++++..+.+
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~ 192 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSK 192 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 345555556677788899999998888878777888889999999999999865443
No 339
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=25.61 E-value=4.9e+02 Score=25.69 Aligned_cols=65 Identities=9% Similarity=0.172 Sum_probs=45.7
Q ss_pred CchHHHHhhhcccC-----CCceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHH
Q 013780 27 FSMVHFLFRNSASY-----SSKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFP 93 (436)
Q Consensus 27 ~ti~~~l~~~~~~~-----p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~ 93 (436)
.++.+.+.+..+.+ -+..|+-.. .....+|+++.+.++.++..+.+. ++++..+.|++++..-=+
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~-g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKv 422 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP-GKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKV 422 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC-CCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHH
Confidence 45666666665442 234444433 247899999999999999999875 577888888888764433
No 340
>PRK09192 acyl-CoA synthetase; Validated
Probab=25.60 E-value=3.7e+02 Score=27.28 Aligned_cols=87 Identities=9% Similarity=-0.045 Sum_probs=61.4
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCC-CC-------HHHHHHHHH
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD-------IEMALRAIE 280 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~-~~-------~~~~~~~l~ 280 (436)
-.+|...+...+..++..+.-.+.. ++++...++..--+- ..+++++..|+..+..+. +. ++.+...++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFV--EAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHH--HHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 4688889888877777666543332 377777777644333 367888999998887742 11 578899999
Q ss_pred HhcceEEEecHHHHHHHH
Q 013780 281 KYRVTVWWVVPPIILALA 298 (436)
Q Consensus 281 ~~~~t~l~~~p~~~~~l~ 298 (436)
+.++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999998877654443
No 341
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=25.33 E-value=1.7e+02 Score=26.57 Aligned_cols=50 Identities=12% Similarity=0.218 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCCCcH-HHHHHHHHHhCCe-EeecCCC
Q 013780 63 IVIKVSHSFRHLGITKKDVVLIFAPNSIHF-PICFLGVIAIGAI-ASTANPV 112 (436)
Q Consensus 63 ~~~~la~~L~~~gv~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~-~v~l~~~ 112 (436)
....+...|.+.|+.+++.|.+++.....+ ..+++.+...|.. +..++-.
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG 122 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGG 122 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCC
Confidence 356788889999999999999999876533 3455667777855 3445443
No 342
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.16 E-value=2.9e+02 Score=27.85 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=58.6
Q ss_pred ehhhhHHHhhhhhHHhhhhc-cCC-CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEE
Q 013780 211 ILTHKNFIAASLMISAHQEL-VGE-LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVW 287 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~-~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l 287 (436)
.+|...+...+..++..+.. .+. .++++....+-.. .+...+++++..|+..+..+ ...+..+...+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 67889998888888777642 222 2366666655443 22346789999999998774 5678889999999999999
Q ss_pred EecHHHH
Q 013780 288 WVVPPII 294 (436)
Q Consensus 288 ~~~p~~~ 294 (436)
+..+...
T Consensus 126 i~~~~~~ 132 (560)
T PRK08974 126 VIVSNFA 132 (560)
T ss_pred EEecccc
Confidence 8766543
No 343
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=25.07 E-value=3.3e+02 Score=24.73 Aligned_cols=56 Identities=14% Similarity=0.118 Sum_probs=44.6
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccc
Q 013780 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPE 135 (436)
Q Consensus 79 gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~ 135 (436)
.+.| +....+-.-..+.++|...|..++.+-|....+.....++..+++++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 4556 6666677777788888888999888878777778888999999999988754
No 344
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.00 E-value=3.1e+02 Score=20.78 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=31.2
Q ss_pred HHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEcc
Q 013780 98 GVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 98 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~ 134 (436)
.+-..|..++.+.++.+.+++...+.+.+|++|....
T Consensus 22 ~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 22 ALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 3344788998999999999999999999999988764
No 345
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=24.82 E-value=2.6e+02 Score=20.73 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=35.6
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeec
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTA 109 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l 109 (436)
..+.+.++.+. +.+.+..+...|.++|.++.....+...+...|..-+.+
T Consensus 39 inip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 39 INIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred EECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEEe
Confidence 45777766543 333334567789999999989988989998999865543
No 346
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=24.69 E-value=2.5e+02 Score=26.63 Aligned_cols=59 Identities=7% Similarity=0.047 Sum_probs=43.9
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC-----C---HHHHHHHHHhcCCcEEEEcc
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY-----T---VSELSKQVKDSNPKLVITVP 134 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-----~---~~~~~~~l~~~~~~~vi~~~ 134 (436)
++++++|+|.+.-+.++.++++-+...|..++.+.-+. + .+..+.+.+..+....+.+-
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 46789999999999999999999988887655443211 2 23457788888888877654
No 347
>PRK10595 SOS cell division inhibitor; Provisional
Probab=24.62 E-value=2.9e+02 Score=22.85 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=36.9
Q ss_pred HHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecC--C-CCCHHHH---HHHHHhcCCcEEEE
Q 013780 68 SHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN--P-VYTVSEL---SKQVKDSNPKLVIT 132 (436)
Q Consensus 68 a~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~~---~~~l~~~~~~~vi~ 132 (436)
+.+|.+.||..+..+.|.-.+..+.+-++-=|++.|..-+.+- | ..+.+++ ....+..++-.++.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 4566777887766666666666777777777777775332222 3 4554433 33334444444444
No 348
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=24.59 E-value=2.1e+02 Score=24.29 Aligned_cols=44 Identities=9% Similarity=0.019 Sum_probs=28.5
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHH
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFL 97 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~l 97 (436)
.-+|+.|+.+++.++|..+.+. .+....+.+...++--.+++.+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~~L 53 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLADL 53 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHHHH
Confidence 4689999999999999999874 2212234444444444444433
No 349
>PRK12582 acyl-CoA synthetase; Provisional
Probab=24.43 E-value=2.4e+02 Score=29.01 Aligned_cols=80 Identities=9% Similarity=-0.029 Sum_probs=57.2
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEcCC-CC-----HHHHHHHHHHh
Q 013780 210 VILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGK-FD-----IEMALRAIEKY 282 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~-~~-----~~~~~~~l~~~ 282 (436)
-.+|++.+...+..++..+.-.+.+ ++++...++-.. .+...+++++..|+..+...+ ++ ...+...+++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~ 156 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLV 156 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhc
Confidence 4689999998888877766443333 378877777443 333467889999998887743 33 37888889999
Q ss_pred cceEEEecH
Q 013780 283 RVTVWWVVP 291 (436)
Q Consensus 283 ~~t~l~~~p 291 (436)
++..++...
T Consensus 157 ~~~~vi~~~ 165 (624)
T PRK12582 157 KPRVVFAQS 165 (624)
T ss_pred CCcEEEecC
Confidence 988887653
No 350
>PRK07409 threonine synthase; Validated
Probab=24.14 E-value=2.8e+02 Score=26.17 Aligned_cols=53 Identities=11% Similarity=-0.105 Sum_probs=37.4
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCC-CHHHHHHHHHhcCCcEEEEccch
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVY-TVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
+....+-.-..+.++|...|..+..+-|.. ........++..++++++++..+
T Consensus 82 v~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~ 135 (353)
T PRK07409 82 ICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNF 135 (353)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCH
Confidence 334444446777888889998876666654 34555667788999999998754
No 351
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=23.81 E-value=86 Score=27.26 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=24.4
Q ss_pred HHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 95 CFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 95 ~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
.+=++..+|+.+++|++..+.+++..+++.+ +-++
T Consensus 29 Yv~~i~~aG~~pv~ip~~~~~~~~~~~l~~i--dGll 63 (217)
T PF07722_consen 29 YVKAIEAAGGRPVPIPYDADDEELDELLDRI--DGLL 63 (217)
T ss_dssp HHHHHHHTT-EEEEE-SS--HHHHHHHHHCS--SEEE
T ss_pred HHHHHHHcCCEEEEEccCCCHHHHHHHHhhc--CEEE
Confidence 3456788899999999999999999999865 4444
No 352
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=23.61 E-value=1.3e+02 Score=21.39 Aligned_cols=39 Identities=5% Similarity=0.099 Sum_probs=32.1
Q ss_pred HHHHh-cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 69 HSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 69 ~~L~~-~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
.+|.+ .||+.|+.++-...+..|.+..+=|++++.-+-+
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 45654 6999999999999999999999999998875533
No 353
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=23.56 E-value=5.1e+02 Score=24.01 Aligned_cols=52 Identities=10% Similarity=-0.015 Sum_probs=40.6
Q ss_pred EcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 85 FAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 85 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
....+=.-..+.++|...|..++.+-|..........++..++++++++..+
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQ 123 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 4444556777788888899988777776666777888999999999998753
No 354
>PRK07503 methionine gamma-lyase; Provisional
Probab=23.47 E-value=3.7e+02 Score=25.96 Aligned_cols=54 Identities=15% Similarity=0.231 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 013780 76 ITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~ 132 (436)
+++||.|++..+ .+. +.....++...|+.+..++.. ..+++...++. +.++|+.
T Consensus 101 l~~Gd~Viv~~~-~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~l 156 (403)
T PRK07503 101 LRPGDEVIVDQT-LYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYF 156 (403)
T ss_pred cCCCCEEEEccC-ccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEE
Confidence 567776655332 221 111222344567666666543 34555555433 4556654
No 355
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.07 E-value=3.5e+02 Score=21.46 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhhccCCcEEEEcC-CCCHHHHHHHHHHhcceEEEecHH------HHHHHHhccccCccCCCcceEEEec
Q 013780 245 FHVFGLSVILYDQLQKGNCVVSMG-KFDIEMALRAIEKYRVTVWWVVPP------IILALAKNSLVRKFDISSLKLVGSG 317 (436)
Q Consensus 245 ~~~~g~~~~~~~~l~~G~~v~~~~-~~~~~~~~~~l~~~~~t~l~~~p~------~~~~l~~~~~~~~~~l~~lr~i~~g 317 (436)
.|..|-.......=.+|-.++-.. ..+++.+++...++++..+..+.- .+..+.+.....+ +... .+++|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g--l~~~-~vivG 89 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG--LEGI-LLYVG 89 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC--CCCC-EEEec
Confidence 466666433333444677777664 458899999999999987665432 2333333332222 3333 36777
Q ss_pred CCC-CcHHHHH
Q 013780 318 AAP-LGKELME 327 (436)
Q Consensus 318 g~~-l~~~~~~ 327 (436)
|.+ ++++-.+
T Consensus 90 G~~vi~~~d~~ 100 (134)
T TIGR01501 90 GNLVVGKQDFP 100 (134)
T ss_pred CCcCcChhhhH
Confidence 764 5554443
No 356
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=23.04 E-value=1.5e+02 Score=30.49 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=38.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe-EeecCC
Q 013780 64 VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI-ASTANP 111 (436)
Q Consensus 64 ~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~-~v~l~~ 111 (436)
...+...|.+.|+.+++.|.++|..+.....+++++-.+|.. +...+-
T Consensus 208 ~~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~~V~~YdG 256 (610)
T PRK09629 208 RQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYPRVKAYAG 256 (610)
T ss_pred HHHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCCCcEEeCC
Confidence 356778888899999999999999998888889999999975 334443
No 357
>PRK08638 threonine dehydratase; Validated
Probab=22.83 E-value=5.2e+02 Score=24.21 Aligned_cols=54 Identities=9% Similarity=-0.004 Sum_probs=41.8
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+....+-.-..+.++|...|..+..+-|..........++..+++++++.....
T Consensus 79 v~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 132 (333)
T PRK08638 79 VACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFN 132 (333)
T ss_pred EEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHH
Confidence 334445567777888899998888877776667778899999999999976543
No 358
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=22.57 E-value=3.2e+02 Score=26.74 Aligned_cols=58 Identities=5% Similarity=-0.134 Sum_probs=45.1
Q ss_pred EEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHH
Q 013780 82 VLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDK 139 (436)
Q Consensus 82 V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 139 (436)
-.+....+=.-..+.++|..+|..++.+=|..........++..+++++++...+.+.
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a 211 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVA 211 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 3445555566777788888899888887777777888899999999999999765443
No 359
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=22.54 E-value=1.1e+02 Score=23.60 Aligned_cols=81 Identities=14% Similarity=0.207 Sum_probs=50.0
Q ss_pred CCCchHHHHhhhcccCCC-ceEEEeCCCC-ccccHHHHHHH------HHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHH
Q 013780 25 PSFSMVHFLFRNSASYSS-KLALIDADSD-ESLSFSQFKSI------VIKVSHSFRHLGITKKDVVLIFAPNSIHFPICF 96 (436)
Q Consensus 25 ~~~ti~~~l~~~~~~~p~-~~a~~~~~~~-~~~Ty~el~~~------~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~ 96 (436)
++.||-+-|.+.+.-.|. ++.++...+| +--||.=..++ .+.-|+.| .++||+|.|+.-
T Consensus 23 GSitID~dlldaagile~EkV~I~N~nNGaRf~TYvI~g~rGSg~I~lNGAAArl----~~~GD~VII~sy--------- 89 (126)
T COG0853 23 GSITIDEDLLDAAGILENEKVDIVNVNNGARFSTYVIAGERGSGVICLNGAAARL----VQVGDLVIIMSY--------- 89 (126)
T ss_pred EeEEECHHHHhhcCCCCCceEEEEECCCCcEEEEEEEEccCCCcEEEechHHHhh----CCCCCEEEEEEc---------
Confidence 348888889888888874 6666666555 44566544333 12223333 357777777543
Q ss_pred HHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccch
Q 013780 97 LGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPEL 136 (436)
Q Consensus 97 lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~ 136 (436)
..++.+++ +..+|++++++++.
T Consensus 90 --------------~~~~e~e~----~~~~Pkvv~~d~~N 111 (126)
T COG0853 90 --------------AQMSEEEA----KTHKPKVVVVDEKN 111 (126)
T ss_pred --------------ccCCHHHH----hccCCeEEEECCCC
Confidence 23455553 67789999988764
No 360
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=22.50 E-value=1.3e+02 Score=20.74 Aligned_cols=25 Identities=12% Similarity=0.389 Sum_probs=22.0
Q ss_pred CccccHHHHHHHHHHHHHHHHhcCC
Q 013780 52 DESLSFSQFKSIVIKVSHSFRHLGI 76 (436)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~gv 76 (436)
|+.+|.+++.+.++++.+.+++.|.
T Consensus 28 g~~l~~~~l~~~~~~l~~~y~~~GY 52 (76)
T PF08479_consen 28 GRCLTLADLQQLADALTNYYREKGY 52 (76)
T ss_dssp TSBB-HHHHHHHHHHHHHHHHHTT-
T ss_pred CCCcCHHHHHHHHHHHHHHHHHcCc
Confidence 7899999999999999999999886
No 361
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=22.48 E-value=3.7e+02 Score=25.69 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=12.2
Q ss_pred HHHHHHHhhCCCCeeeeccccccccC
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETC 349 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~ 349 (436)
+...+|.+.+.-..+-. .+|..|+.
T Consensus 308 ~~~~~f~~~l~~~~~~~-s~G~~~sl 332 (382)
T TIGR02080 308 QTVRRFLGGLSLFTLAE-SLGGVESL 332 (382)
T ss_pred HHHHHHHHcCCcceEec-cCCCCcce
Confidence 33444555443233444 56666653
No 362
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=22.38 E-value=2.9e+02 Score=19.54 Aligned_cols=49 Identities=6% Similarity=0.122 Sum_probs=32.0
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecC
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTAN 110 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 110 (436)
..+++.++..... .+.++++|.+++.++.....+...+..+|..+..++
T Consensus 34 ~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l~ 82 (90)
T cd01524 34 INIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNLD 82 (90)
T ss_pred EeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEec
Confidence 4667766544321 246678899999887777777777777887444443
No 363
>PRK10802 peptidoglycan-associated outer membrane lipoprotein; Provisional
Probab=21.98 E-value=1.7e+02 Score=24.36 Aligned_cols=53 Identities=11% Similarity=0.078 Sum_probs=35.2
Q ss_pred hHHHHhhhcccCCCceEEEeCCCC----ccccHHHHHHHHHHHHHHHHhcCCCCCCE
Q 013780 29 MVHFLFRNSASYSSKLALIDADSD----ESLSFSQFKSIVIKVSHSFRHLGITKKDV 81 (436)
Q Consensus 29 i~~~l~~~~~~~p~~~a~~~~~~~----~~~Ty~el~~~~~~la~~L~~~gv~~gd~ 81 (436)
+.+.+....+.+|+....+.++.+ ..+.+.-=.+|+..+..+|.+.|+.+...
T Consensus 87 ~L~~~a~~L~~~p~~~v~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gv~~~ri 143 (173)
T PRK10802 87 MLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQI 143 (173)
T ss_pred HHHHHHHHHHhCCCceEEEEEecCCCCChHHHHHHHHHHHHHHHHHHHHcCCCHHHe
Confidence 445555666778876666655433 34444445678999999999889876543
No 364
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=21.93 E-value=3.7e+02 Score=24.91 Aligned_cols=58 Identities=5% Similarity=-0.080 Sum_probs=36.7
Q ss_pred HHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 013780 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (436)
Q Consensus 71 L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~ 132 (436)
+...++++|++|+|...-..-.. +...+...|+.++.+..+ .+ -..++++.+++.++.
T Consensus 158 ~~~~~~~~g~~VlV~G~g~iG~~-a~~~a~~~G~~vi~~~~~--~~-~~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 158 LLRASLPPGGRLGLYGFGGSAHL-TAQVALAQGATVHVMTRG--AA-ARRLALALGAASAGG 215 (329)
T ss_pred HHhcCCCCCCEEEEEcCCHHHHH-HHHHHHHCCCeEEEEeCC--hH-HHHHHHHhCCceecc
Confidence 34467899999999987444433 344445568765544332 22 346678888887764
No 365
>PTZ00297 pantothenate kinase; Provisional
Probab=21.91 E-value=6.4e+02 Score=29.26 Aligned_cols=100 Identities=11% Similarity=-0.047 Sum_probs=70.6
Q ss_pred eehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEcCCCCHHHHHHHHHHhcceEEE
Q 013780 210 VILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSMGKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~l~~~~~t~l~ 288 (436)
..+|++.+...+..++..+.-.+... |++...++-..-. ....++++..|+..+-.. .+...+...+...++++++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ew--via~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVf 532 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNI--VILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVF 532 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEE
Confidence 35899999888888776665444433 7776666644322 235678888898888774 3567888999999999999
Q ss_pred ecHHHHHHHHhccccCccCCCcceEEEecC
Q 013780 289 VVPPIILALAKNSLVRKFDISSLKLVGSGA 318 (436)
Q Consensus 289 ~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg 318 (436)
+....+..+.+... +.||.+++-+
T Consensus 533 v~~~~l~kl~~i~~------~~Lr~IIv~d 556 (1452)
T PTZ00297 533 ADRNSVAAILTCRS------RKLETVVYTH 556 (1452)
T ss_pred EchhHHHHHHhhcc------cCCcEEEEEC
Confidence 99888877765421 2577777654
No 366
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=21.73 E-value=1.9e+02 Score=26.37 Aligned_cols=55 Identities=9% Similarity=0.326 Sum_probs=44.8
Q ss_pred ccccHHHHHHH-----HH-HHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 013780 53 ESLSFSQFKSI-----VI-KVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIAS 107 (436)
Q Consensus 53 ~~~Ty~el~~~-----~~-~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 107 (436)
..+.|.++.+. +. .+...+...|+.+++.|.++|..+......+||+-.+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 56888888872 22 344444578999999999999999999999999999998766
No 367
>PF12646 DUF3783: Domain of unknown function (DUF3783); InterPro: IPR016621 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.58 E-value=2.5e+02 Score=18.41 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHH
Q 013780 63 IVIKVSHSFRHLGITKKDVVLIFAPNSIHFPIC 95 (436)
Q Consensus 63 ~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~ 95 (436)
..+++-..+++.|+ +...-|+.-|++..|-+.
T Consensus 13 el~~~l~~~r~~~~-~~~~kAvlT~tN~~Wt~~ 44 (58)
T PF12646_consen 13 ELDKFLDALRKAGI-PIPLKAVLTPTNINWTLK 44 (58)
T ss_pred HHHHHHHHHHHcCC-CcceEEEECCCcccCcHH
Confidence 44555566666677 666677777776665543
No 368
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=21.57 E-value=4.9e+02 Score=25.31 Aligned_cols=55 Identities=11% Similarity=0.086 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe--ecCCCCCHHHHHHHHHhcCCcEEE
Q 013780 77 TKKDVVLIFAPNSIHFPICFLGVIAIGAIAS--TANPVYTVSELSKQVKDSNPKLVI 131 (436)
Q Consensus 77 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~~~~~l~~~~~~~vi 131 (436)
-+|-+|+.+++=.....+.+..+..+|+.+. ..||..+.+++...|...++.++-
T Consensus 34 ~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a 90 (413)
T cd00401 34 LKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFA 90 (413)
T ss_pred CCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEE
Confidence 3688999999999999999999999998754 445666788888888887777655
No 369
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=21.55 E-value=2.8e+02 Score=25.33 Aligned_cols=83 Identities=16% Similarity=0.202 Sum_probs=51.0
Q ss_pred CCcceEEEecCCC--CcHHHHHHHHhhCCCCeeeeccccccccCCcccccCCCCCccCcCccccccCCcEEEEEeCCCCc
Q 013780 308 ISSLKLVGSGAAP--LGKELMEDCQKNIPGATIFQVGYGMTETCAPISLENPLVGVRRSGSAGTLVAGVEAQIVSVDTLK 385 (436)
Q Consensus 308 l~~lr~i~~gg~~--l~~~~~~~~~~~~~~~~i~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~ 385 (436)
+.+|-.-++|++. -..++.+++|+.||+.. +|.|-++++-+......+. ..-+.+-..--|..-+++++ +|.
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps~a--e~~~v~sDa~~sl~a~t~g---~~~GiVLiaGTgs~crl~~~-DGs 141 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPSVA--ENFYVTSDADGSLAAATPG---GEGGIVLIAGTGSNCRLVNP-DGS 141 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccchh--heeeeehhHHHHHhhcCCC---CCCcEEEEecCCceeEEECC-CCC
Confidence 4555555566654 34789999999998333 4488899987655544332 12233333445566788885 777
Q ss_pred cCCCCCceEEE
Q 013780 386 PLPPNQLGEIW 396 (436)
Q Consensus 386 ~~~~g~~Gel~ 396 (436)
.-..|-.|.+.
T Consensus 142 ~~~~ggwg~~i 152 (336)
T KOG1794|consen 142 EKGAGGWGHMI 152 (336)
T ss_pred ccCCCCCCCcc
Confidence 66666656543
No 370
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=21.53 E-value=1.9e+02 Score=28.02 Aligned_cols=58 Identities=24% Similarity=0.312 Sum_probs=36.7
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCC---------CCH-----HHHHHHHHhcC-Cc----EEEEccch
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPV---------YTV-----SELSKQVKDSN-PK----LVITVPEL 136 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~---------~~~-----~~~~~~l~~~~-~~----~vi~~~~~ 136 (436)
+++||.|++ -+|+-.++. .|+...|+.++.++|. .+. +.++..++... ++ ++|+.+.+
T Consensus 103 ~~~gd~VLv-~RN~HkSv~--~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 103 CRPGDKVLV-DRNCHKSVY--NALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp TTTTCEEEE-ETT--HHHH--HHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred cCCCCEEEE-cCCcHHHHH--HHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 478997655 566555554 4999999999988884 123 67777777543 33 45666544
No 371
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=21.41 E-value=1.1e+02 Score=20.21 Aligned_cols=22 Identities=18% Similarity=0.116 Sum_probs=17.7
Q ss_pred HHHHHhcCCCCCCEEEEEcCCC
Q 013780 68 SHSFRHLGITKKDVVLIFAPNS 89 (436)
Q Consensus 68 a~~L~~~gv~~gd~V~l~~~n~ 89 (436)
..+|.++|+..|+.|-|-..++
T Consensus 30 G~WL~~aGF~~G~~v~V~v~~g 51 (57)
T PF08845_consen 30 GKWLEEAGFTIGDPVKVRVMPG 51 (57)
T ss_pred hhhhHHhCCCCCCEEEEEEECC
Confidence 4688899999999998866543
No 372
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=21.19 E-value=4e+02 Score=26.08 Aligned_cols=25 Identities=4% Similarity=-0.049 Sum_probs=12.0
Q ss_pred HHHHHHHhhCCCCeeeeccccccccC
Q 013780 324 ELMEDCQKNIPGATIFQVGYGMTETC 349 (436)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~~YG~tE~~ 349 (436)
+...+|.+.+.-..+-. ..|..|+.
T Consensus 354 ~~~~~f~~~l~l~~~~~-slG~~~sL 378 (433)
T PRK08134 354 AAGRKFIESLKLFSHLA-NVGDARSL 378 (433)
T ss_pred HHHHHHHHhCCcceecc-ccCCCCce
Confidence 34445555543223334 56666653
No 373
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=21.13 E-value=3.8e+02 Score=26.20 Aligned_cols=80 Identities=6% Similarity=0.022 Sum_probs=55.7
Q ss_pred eehhhhHHHhhhhhHHhhhhccCC--CCcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceE
Q 013780 210 VILTHKNFIAASLMISAHQELVGE--LDHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTV 286 (436)
Q Consensus 210 v~~t~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~ 286 (436)
+-+..+++...+..++..+.-.+. .++++...++-.. .+...+++++..|+.++.. +.....++...+++.++.+
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~--e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~ 95 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPL--QFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQ 95 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCH--HHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCE
Confidence 344567788887777776655432 2366666655432 2234678889999999887 4567888999999999998
Q ss_pred EEecH
Q 013780 287 WWVVP 291 (436)
Q Consensus 287 l~~~p 291 (436)
++...
T Consensus 96 ~i~~~ 100 (452)
T PRK07445 96 IWGLD 100 (452)
T ss_pred EEecC
Confidence 88754
No 374
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.13 E-value=6.1e+02 Score=23.59 Aligned_cols=98 Identities=7% Similarity=0.072 Sum_probs=67.4
Q ss_pred CchHHHHhhhcccCCCceEEEeC-------CCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC-CCCcHHHHHHH
Q 013780 27 FSMVHFLFRNSASYSSKLALIDA-------DSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAP-NSIHFPICFLG 98 (436)
Q Consensus 27 ~ti~~~l~~~~~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~-n~~~~~~~~lA 98 (436)
-|+...+.+..+..+.++.-+.. ....-+-=+|+.+.+..+++.|+..==+.-| |.++.+ ...|.+-+.+-
T Consensus 140 TTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraALReDPD-VIlvGEmRD~ETi~~ALt 218 (353)
T COG2805 140 TTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAALREDPD-VILVGEMRDLETIRLALT 218 (353)
T ss_pred HHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHHhhcCCC-EEEEeccccHHHHHHHHH
Confidence 56777777777777777655433 1113456678888899999999864213344 444455 56888888888
Q ss_pred HHHhC-CeEeecCCCCCHHHHHHHHHhc
Q 013780 99 VIAIG-AIASTANPVYTVSELSKQVKDS 125 (436)
Q Consensus 99 ~~~~G-~~~v~l~~~~~~~~~~~~l~~~ 125 (436)
++..| .++-.++.+...+.+..++.-.
T Consensus 219 AAETGHLV~~TLHT~sA~~ti~RiidvF 246 (353)
T COG2805 219 AAETGHLVFGTLHTNSAAKTIDRIIDVF 246 (353)
T ss_pred HHhcCCEEEEecccccHHHHHHHHHHhC
Confidence 88888 6677888877778887777643
No 375
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=21.10 E-value=7.4e+02 Score=24.94 Aligned_cols=46 Identities=7% Similarity=0.048 Sum_probs=27.4
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCC----HHHHHHHHHh
Q 013780 78 KKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYT----VSELSKQVKD 124 (436)
Q Consensus 78 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~~~~~l~~ 124 (436)
.|.+++|+...+.-+-++-|-. .+|+.++.+-.... .++++.+++.
T Consensus 362 ~GKrvaI~gdpd~~~~l~~fL~-ElGmepv~v~~~~~~~~~~~~l~~ll~~ 411 (515)
T TIGR01286 362 HGKRFAIYGDPDFVMGLVRFVL-ELGCEPVHILCTNGTKRWKAEMKALLAA 411 (515)
T ss_pred cCceEEEECCHHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 5789999987654444433443 78988775543333 3445555544
No 376
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.05 E-value=3.2e+02 Score=26.14 Aligned_cols=58 Identities=16% Similarity=0.034 Sum_probs=43.6
Q ss_pred EEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHH
Q 013780 81 VVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWD 138 (436)
Q Consensus 81 ~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~ 138 (436)
.-.+....+=.-..+.++|..+|+.++.+-|..........++..++++++++..+.+
T Consensus 95 ~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 95 ATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 3445555556677777888899988887777666677788889999999999875443
No 377
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.04 E-value=6.7e+02 Score=24.37 Aligned_cols=120 Identities=13% Similarity=0.041 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCCCCCCCcceehhhhHHHhhhhhHHhhhhccCCCC-cEEEechhHHHHHHHHHHHHhhccCCcEEEEc-
Q 013780 190 KQTDAAALLYSSGTTGVSKGVILTHKNFIAASLMISAHQELVGELD-HVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM- 267 (436)
Q Consensus 190 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~- 267 (436)
.++.+|++--- . .+|...+...+..++..+.-.+.+. |+++..+|-..-+-. .++.-|..|..-++.
T Consensus 41 ~pdriAv~d~~---~------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~--~~FALlrlGv~PVlAL 109 (542)
T COG1021 41 YPDRIAVIDGE---R------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYI--TFFALLRLGVAPVLAL 109 (542)
T ss_pred cCCceEEecCc---c------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHH--HHHHHHHcCcchhhcc
Confidence 45677776521 1 2889999988888877766655544 888888876554433 456666677655544
Q ss_pred CCCCHHHHHHHHHHhcceEEEecHH----HHHHHHhccccCccCCCcceEEEecCCCCcH
Q 013780 268 GKFDIEMALRAIEKYRVTVWWVVPP----IILALAKNSLVRKFDISSLKLVGSGAAPLGK 323 (436)
Q Consensus 268 ~~~~~~~~~~~l~~~~~t~l~~~p~----~~~~l~~~~~~~~~~l~~lr~i~~gg~~l~~ 323 (436)
+.....++-...+.-.++.++..-. .++.+++.... ..++||+++.-|+.=.+
T Consensus 110 psHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a---~~~tlr~v~v~ge~~~~ 166 (542)
T COG1021 110 PSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVA---KHPTLRHVIVAGEAEHP 166 (542)
T ss_pred chhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHh---hCCcceEEEEccCCCCc
Confidence 3334445555555555554443221 22233332221 23689999998877533
No 378
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=21.02 E-value=2.5e+02 Score=27.17 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCEEEEEcCCC-CcHH-HHHHHHHHhCCeEeec
Q 013780 60 FKSIVIKVSHSFRHL--GITKKDVVLIFAPNS-IHFP-ICFLGVIAIGAIASTA 109 (436)
Q Consensus 60 l~~~~~~la~~L~~~--gv~~gd~V~l~~~n~-~~~~-~~~lA~~~~G~~~v~l 109 (436)
+..+.+++|+.|.+. +|++|+.|.|..+-. .+++ .+.-.+.++|+..+.+
T Consensus 3 ~~~~l~kyA~llV~~glnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v 56 (398)
T PF02073_consen 3 FDERLEKYAELLVKYGLNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIV 56 (398)
T ss_dssp HHHHHHHHHHHHHHTTT---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEE
T ss_pred chHHHHHHHHHHHHhccCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEE
Confidence 567889999999764 569999999988865 3333 3444667778844433
No 379
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=20.89 E-value=3e+02 Score=22.66 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=18.4
Q ss_pred ccHHHHHHHHHHHHHHHHhc
Q 013780 55 LSFSQFKSIVIKVSHSFRHL 74 (436)
Q Consensus 55 ~Ty~el~~~~~~la~~L~~~ 74 (436)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999764
No 380
>PRK07868 acyl-CoA synthetase; Validated
Probab=20.86 E-value=5.1e+02 Score=28.60 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=48.8
Q ss_pred hcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHhh
Q 013780 73 HLGITKKDVVLIFAPNSIH--FPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKD 142 (436)
Q Consensus 73 ~~gv~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~ 142 (436)
..++.++|++...+|-+.. +...+++++..|.. +.+.+.++.+.+...+++.++.++...+..+..+..
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~-vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR-IALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE-EEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 3577889998888875432 22334444444544 455567889999999999999999988877766644
No 381
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.82 E-value=5.3e+02 Score=21.94 Aligned_cols=82 Identities=12% Similarity=0.010 Sum_probs=52.8
Q ss_pred ccccHHHHHHHHHHHHHHHH-------hcCCCCCCEEEEEcCCCCc----HHHHHHHHHHhCCeEeecCCCCCHHHHHHH
Q 013780 53 ESLSFSQFKSIVIKVSHSFR-------HLGITKKDVVLIFAPNSIH----FPICFLGVIAIGAIASTANPVYTVSELSKQ 121 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~-------~~gv~~gd~V~l~~~n~~~----~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~ 121 (436)
..++..|..-.+..+-..|. ...-.++-+|.+.+..+.. ..++...+-..|..++.+..+.+.+++...
T Consensus 49 ~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~ 128 (201)
T cd02070 49 GEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEA 128 (201)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 56677776655544433332 2222224466666555422 233344445679999999999999999999
Q ss_pred HHhcCCcEEEEcc
Q 013780 122 VKDSNPKLVITVP 134 (436)
Q Consensus 122 l~~~~~~~vi~~~ 134 (436)
+...+|++|....
T Consensus 129 ~~~~~~d~v~lS~ 141 (201)
T cd02070 129 VKEHKPDILGLSA 141 (201)
T ss_pred HHHcCCCEEEEec
Confidence 9999999988663
No 382
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=20.79 E-value=3.1e+02 Score=28.85 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=38.9
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCC---------CH-----HHHHHHHHhc-CC----cEEEEccch
Q 013780 76 ITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVY---------TV-----SELSKQVKDS-NP----KLVITVPEL 136 (436)
Q Consensus 76 v~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~~-----~~~~~~l~~~-~~----~~vi~~~~~ 136 (436)
+++||.|+ +-+|+--++.- |+..+|+.+|.+.|.. +. +.++..++.. ++ .+||+.+.+
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY 308 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY 308 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC
Confidence 57899665 56676666443 9999999999998864 23 6677777654 22 355555543
No 383
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=20.67 E-value=3.2e+02 Score=20.20 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=32.8
Q ss_pred ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 013780 53 ESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAI 105 (436)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 105 (436)
..+.+.+|..+ +...+..+++.|.++|..+.....+...+...|..
T Consensus 47 inip~~~l~~~-------~~~l~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~ 92 (109)
T cd01533 47 VSCPGAELVLR-------VGELAPDPRTPIVVNCAGRTRSIIGAQSLINAGLP 92 (109)
T ss_pred eeCCHHHHHHH-------HHhcCCCCCCeEEEECCCCchHHHHHHHHHHCCCC
Confidence 45677666543 33444456778999999988887788888888873
No 384
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=20.63 E-value=65 Score=23.88 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=22.7
Q ss_pred ccccccCCcEEEEEeCCCCccCCC---CCceEEEEecC
Q 013780 366 SAGTLVAGVEAQIVSVDTLKPLPP---NQLGEIWVRGP 400 (436)
Q Consensus 366 ~~G~p~~~~~v~i~d~~~~~~~~~---g~~Gel~v~g~ 400 (436)
+-|+|++|++|++.+...++++.. +..|...+...
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~ 60 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDST 60 (97)
T ss_pred CCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCC
Confidence 458999999999998225554443 34455555443
No 385
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=20.56 E-value=4.6e+02 Score=24.42 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=36.6
Q ss_pred HHhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEE
Q 013780 71 FRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVIT 132 (436)
Q Consensus 71 L~~~gv~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~ 132 (436)
+...++++|+.|+|... +.--..+...+...|+.++.++. +.+.+. .++..+++.++.
T Consensus 159 ~~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~--~~~~~~-~~~~~Ga~~~i~ 216 (349)
T TIGR03201 159 AVQAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDI--DPEKLE-MMKGFGADLTLN 216 (349)
T ss_pred HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcC--CHHHHH-HHHHhCCceEec
Confidence 34467899999999988 54444444455556886555533 344443 456677777664
No 386
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=20.32 E-value=7.3e+02 Score=24.59 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=44.0
Q ss_pred CchHHHHhhhcccC---C--CceEEEeCCCCccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcHHH
Q 013780 27 FSMVHFLFRNSASY---S--SKLALIDADSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPI 94 (436)
Q Consensus 27 ~ti~~~l~~~~~~~---p--~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~gd~V~l~~~n~~~~~~ 94 (436)
..+.+.+.+....+ + +..|+-. ......+|+++.+.++.+++.+.+. ++++.++.|++++..-=+.
T Consensus 354 ~~l~~~i~~~l~~f~~~~~~~~~alal-~g~~~~~y~~iq~la~~i~~~~~~~-~~~~~Pliiv~e~D~aK~L 424 (475)
T PRK10719 354 EDLVAAIQQALAWFDLDPETDAYALAL-PGSLPPSYAAIQTLAKALVDGVARF-PNKPHPLIVVAEQDMGKAL 424 (475)
T ss_pred HhHHHHHHHHHHHhhccCCcCcEEEEc-CCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEcccHHHHH
Confidence 34666665554332 2 2333333 3358999999999999999999873 4567788888888754443
No 387
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=20.27 E-value=7.2e+02 Score=23.31 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=10.3
Q ss_pred CCCCCCcceehhhhHHHhh
Q 013780 202 GTTGVSKGVILTHKNFIAA 220 (436)
Q Consensus 202 GtTG~pK~v~~t~~~l~~~ 220 (436)
|.+|.+-|.++....+...
T Consensus 231 g~~GlRiG~~~~~~~~~~~ 249 (368)
T PRK03317 231 AFAGGRLGYLAAAPAVVDA 249 (368)
T ss_pred ccchhhhhhhhCCHHHHHH
Confidence 4456555666665555443
No 388
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=20.15 E-value=6.5e+02 Score=22.69 Aligned_cols=91 Identities=13% Similarity=0.012 Sum_probs=61.1
Q ss_pred HhhccCCcEEEEcCCCCHHHHHHHHHHh-cceEEEecHHHHHHHHhccccCccCCCcceEEEecCCCC-------cHHHH
Q 013780 255 YDQLQKGNCVVSMGKFDIEMALRAIEKY-RVTVWWVVPPIILALAKNSLVRKFDISSLKLVGSGAAPL-------GKELM 326 (436)
Q Consensus 255 ~~~l~~G~~v~~~~~~~~~~~~~~l~~~-~~t~l~~~p~~~~~l~~~~~~~~~~l~~lr~i~~gg~~l-------~~~~~ 326 (436)
..-+.-|.++.+-...+...+.+.|... ++|++.-....+..|... +.++.++.||..- .+...
T Consensus 101 a~~I~dgd~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~v~llGG~~~~~~~~~~G~~a~ 172 (269)
T PRK09802 101 VELIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEA--------EGVELLMTGGHLRRQSQSFYGDQAE 172 (269)
T ss_pred HhhCCCCCEEEECCchHHHHHHHhcCcCCCeEEEeCCHHHHHHHHhC--------CCCEEEEECCEEecCCCceECHHHH
Confidence 3445557777777666777888888654 578877777777777543 3467888888653 35566
Q ss_pred HHHHhhCCCCeeeeccccccccCCcccc
Q 013780 327 EDCQKNIPGATIFQVGYGMTETCAPISL 354 (436)
Q Consensus 327 ~~~~~~~~~~~i~~~~YG~tE~~~~~~~ 354 (436)
+.+++...+..++. .-|..+..++...
T Consensus 173 ~~l~~~~~d~afig-~~gi~~~~G~t~~ 199 (269)
T PRK09802 173 QSLQNYHFDMLFLG-VDAIDLERGVSTH 199 (269)
T ss_pred HHHHhccCCEEEEc-CceecCCCCcCCC
Confidence 77777655677777 7787765554443
No 389
>PRK06815 hypothetical protein; Provisional
Probab=20.08 E-value=6.2e+02 Score=23.38 Aligned_cols=54 Identities=11% Similarity=0.001 Sum_probs=40.5
Q ss_pred EEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 84 IFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 84 l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
+....+-.-..+.++|..+|..+..+-|..........++..++++++++.+..
T Consensus 72 v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (317)
T PRK06815 72 ITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDAL 125 (317)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 334555666777788888998877666665556677889999999999987543
No 390
>PRK08198 threonine dehydratase; Provisional
Probab=20.04 E-value=5.6e+02 Score=24.68 Aligned_cols=58 Identities=14% Similarity=0.019 Sum_probs=43.1
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHhCCeEeecCCCCCHHHHHHHHHhcCCcEEEEccchH
Q 013780 79 KDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELW 137 (436)
Q Consensus 79 gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~ 137 (436)
++.|.. ...+=.-..+.++|..+|..++.+=|..........++..+++++++...+.
T Consensus 70 ~~~vv~-aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~ 127 (404)
T PRK08198 70 ARGVVA-ASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYD 127 (404)
T ss_pred CCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHH
Confidence 344444 3445566677788999999888887877777777889999999999976543
No 391
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=20.01 E-value=3.9e+02 Score=26.74 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=56.6
Q ss_pred ehhhhHHHhhhhhHHhhhhccCCC-CcEEEechhHHHHHHHHHHHHhhccCCcEEEEc-CCCCHHHHHHHHHHhcceEEE
Q 013780 211 ILTHKNFIAASLMISAHQELVGEL-DHVVLCVLPMFHVFGLSVILYDQLQKGNCVVSM-GKFDIEMALRAIEKYRVTVWW 288 (436)
Q Consensus 211 ~~t~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~g~~~~~~~~l~~G~~v~~~-~~~~~~~~~~~l~~~~~t~l~ 288 (436)
.+|...+...+..++..+.-.+.. .+++...++-..-+ ...++.++..|+.++.. +......+...+++.++..++
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi 123 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDH--PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLI 123 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEE
Confidence 588888888877777655443332 37777776644432 23577888899888866 456788999999999999988
Q ss_pred ecH
Q 013780 289 VVP 291 (436)
Q Consensus 289 ~~p 291 (436)
+..
T Consensus 124 ~~~ 126 (541)
T TIGR03205 124 TSD 126 (541)
T ss_pred EeC
Confidence 753
Done!