BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013782
(436 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/436 (66%), Positives = 355/436 (81%), Gaps = 1/436 (0%)
Query: 1 MYRATVSRLGSLKGRLGNFQAMRYATSGAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEG 60
MYR SRL SLK R GN R+++S A A +PS G FSW+TG+ SSS+ LD PL
Sbjct: 1 MYRCASSRLSSLKARQGNRVLTRFSSSAAVATKPSG-GLFSWITGDTSSSVTPLDFPLND 59
Query: 61 VSFPPSLPDFVEPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNL 120
V P LPD+VEP K ++TTL NG+++ASE SV+PAASIGLY+D GS+YETP+S GA++L
Sbjct: 60 VKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGATHL 119
Query: 121 LEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVR 180
LE+MAFKST NRSHLRIVRE+EAIGG++ ASASRE M Y++DALKTYVP+MVE+L DCVR
Sbjct: 120 LERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVR 179
Query: 181 NPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDG 240
NP FLDWEV E+L K+K+E+ E NPQ LLLEA+HS GYAG GN L+A E+ +NRL+
Sbjct: 180 NPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINRLNS 239
Query: 241 TILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQ 300
T+LEE VAEN+TAPRMVLAASGV+ +E L +AEPLLSDLP++ EPK VY+GGDYR Q
Sbjct: 240 TVLEEFVAENYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDYRCQ 299
Query: 301 ADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNE 360
AD+ TH ALAFEVPGGW+ +KE++ LTVLQ+LMGGGGSFSAGGPGKGM++RLYLRVLN+
Sbjct: 300 ADAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQ 359
Query: 361 YQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAK 420
Y QI +FSAF+SI+NNTGLFGI T SDF +AVD+ V+ELI +A P +V QVQLNRAK
Sbjct: 360 YPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAK 419
Query: 421 EATKSAVLMNLESRKI 436
+ATKSA+LMNLESR +
Sbjct: 420 QATKSAILMNLESRMV 435
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/438 (63%), Positives = 339/438 (77%), Gaps = 4/438 (0%)
Query: 1 MYRATVSRLGSLKGRLG-NFQAMRYATSGAAA-VRPSSPGFFSWLTGEQSSSLPSLDTPL 58
MYR SR +LKG L + + RYA+S A A S+P + SWL+G ++L SLD PL
Sbjct: 1 MYRTAASRARALKGVLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMPL 60
Query: 59 EGVSFPPSLPDFVEPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGAS 118
+GVS PP L D VEP K+++TTL NG++IASET+ +PAASIGLY+D GS+YE P GA+
Sbjct: 61 QGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGAT 120
Query: 119 NLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDC 178
+LLE+MAFKST NR+H R+VRE+EAIGG+ ASASREQM Y+ DALKTYVPEMVE+L+D
Sbjct: 121 HLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDS 180
Query: 179 VRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRL 238
VRNP FLDWEVNEELRK+K E+ EL NP G LLEAIHS GY+G L +PL APESAL+RL
Sbjct: 181 VRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDRL 240
Query: 239 DGTILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYR 298
+G +LEE + ENFTA RMVLAASGV+ +ELL +AEPL SDLP +PP PKS Y+GGD+R
Sbjct: 241 NGELLEEFMTENFTAARMVLAASGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDFR 300
Query: 299 QQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVL 358
Q TH A+AFEVP GW +KEA+ TVLQ+LMGGGGSFSAGGPGKGMH+ LY RVL
Sbjct: 301 QHTGGEATHFAVAFEVP-GWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYRRVL 359
Query: 359 NEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNR 418
NEYQ++QS +AF SIFN+TGLFGIY C+ F +KA++L +EL +A K V Q L+R
Sbjct: 360 NEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAGGK-VNQAHLDR 418
Query: 419 AKEATKSAVLMNLESRKI 436
AK ATKSAVLMNLESR I
Sbjct: 419 AKAATKSAVLMNLESRMI 436
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 289/437 (66%), Positives = 338/437 (77%), Gaps = 6/437 (1%)
Query: 1 MYRATVSRLGSLKGRLG-NFQAMRYATSGAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLE 59
MYR SR +LKG L NF+A RYA+S A A SS SWL+G SSSLPS++ PL
Sbjct: 1 MYRTAASRAKALKGILNHNFRASRYASSSAVATSSSS---SSWLSGGYSSSLPSMNIPLA 57
Query: 60 GVSFPPSLPDFVEPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASN 119
GVS PP L D VEP K+K TTL NG+ IA+E S +PAASIGLY+D GS+YETP GA++
Sbjct: 58 GVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATH 117
Query: 120 LLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCV 179
LLE+MAFKST NRSH R+VRE+EAIGG+ ASASREQMGY+ DALKTYVPEMVE+L+D V
Sbjct: 118 LLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSV 177
Query: 180 RNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLD 239
RNP FLDWEVNEELRK+K E+GE NP G LLEA+HS GY+GAL NPL APESA+ L
Sbjct: 178 RNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITGLT 237
Query: 240 GTILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQ 299
G +LE V EN+TA RMVLAASGVD +ELL + EPLLSDLP +P P EPKS Y+GGD+RQ
Sbjct: 238 GEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDFRQ 297
Query: 300 QADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLN 359
TH ALAFEVP GW +KEAII TVLQ+LMGGGGSFSAGGPGKGMH+ LYLR+LN
Sbjct: 298 HTGGEATHFALAFEVP-GWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYLRLLN 356
Query: 360 EYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRA 419
++QQ QS +AF S+FNNTGLFGIY CT +F S+ ++LV E+ +A K V Q L+RA
Sbjct: 357 QHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGK-VNQKHLDRA 415
Query: 420 KEATKSAVLMNLESRKI 436
K ATKSA+LMNLESR I
Sbjct: 416 KAATKSAILMNLESRMI 432
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 193/371 (52%), Gaps = 27/371 (7%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +VT LE+G+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E+ N Q ++ + +H+T Y ALG +L P + + L + + ++
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSD--------LPRLPPPTEPKSVYIGGDYRQQADS- 303
PR+VLAA+ GV DELL +A+ D +P LPP + G + R + D
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCK-----FTGSEIRVRDDKM 291
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGG-SFSAGGPGKGMHTRLYLRVLNEYQ 362
P H+A+A E GW + I L V L+G SF G GM+ L L +
Sbjct: 292 PLAHLAIAVEAV-GW-AHPDTICLMVANTLIGNWDRSF-----GGGMNLSSKLAQLTCHG 344
Query: 363 QI-QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ SF +FN+ + +TGL+G+Y S V+ + +V +E + + T VT+ ++ RA+
Sbjct: 345 NLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTS--VTESEVARARN 402
Query: 422 ATKSAVLMNLE 432
K+ +L+ L+
Sbjct: 403 LLKTNMLLQLD 413
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 195/371 (52%), Gaps = 27/371 (7%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS
Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 117
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E
Sbjct: 118 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 177
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E+ N Q ++ + +H+T Y ALG +L P + ++ L + + ++
Sbjct: 178 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 237
Query: 254 PRMVLAAS-GVDLDELLPIA-----EPLLS---DLPRLPPPTEPKSVYIGGDYRQQADS- 303
PR+VLAA+ GV DELL +A E L + ++P LPP + G + R + D
Sbjct: 238 PRIVLAAAGGVSHDELLELAKFHFGESLSTHKGEIPALPPCK-----FTGSEIRVRDDKM 292
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGG-SFSAGGPGKGMHTRLYLRVLNEYQ 362
P H+A+A E GW + I L V L+G SF G GM+ L L +
Sbjct: 293 PLAHLAVAVEAV-GW-AHPDTICLMVANTLIGNWDRSF-----GGGMNLSSKLAQLTCHG 345
Query: 363 QI-QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ SF +FN+ + +TGL+GIY V+ + +V +E + + T VT+ ++ RAK
Sbjct: 346 NLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCT--SVTESEVARAKN 403
Query: 422 ATKSAVLMNLE 432
K+ +L+ L+
Sbjct: 404 LLKTNMLLQLD 414
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 202/375 (53%), Gaps = 21/375 (5%)
Query: 78 VTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRI 137
+T L +GIR+A+ S S A++G+Y+D G +YET G S+ + +AFKST + ++
Sbjct: 17 MTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATESQV 76
Query: 138 VREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLK 197
++ + +GG++ +A+RE + Y L +P V+LL D P + E+ E +
Sbjct: 77 LKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAERRATIA 136
Query: 198 SELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLA-PESALNRLDGTILEEIVAENFTAPR 255
E +LH+ P + E +H+ + G LGN + P+ A N TI E A R
Sbjct: 137 FEAEDLHSRPDAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDTI-REYFATYLHPSR 195
Query: 256 MVLAASGVDLDELLPIAE----PLLSDLPRLPPPTEPKSVYIGGDYRQQADSPE------ 305
MV+A +GV EL+ + P + P ++ ++ Y+GG ++ P
Sbjct: 196 MVVAGTGVAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTHPNY 255
Query: 306 ----THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEY 361
TH+ +AF VP + ++ LQVLMGGGG+FSAGGPGKGM++RLY VLN Y
Sbjct: 256 EQTLTHVQVAFPVPP--FTHPDMFPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVLNRY 313
Query: 362 QQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ ++S +AF +++T LFGI A F +++ E + +A + ++ ++ RAK
Sbjct: 314 RWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMA--RNLSDEEVARAKN 371
Query: 422 ATKSAVLMNLESRKI 436
KS++LMNLES+ I
Sbjct: 372 QLKSSLLMNLESQVI 386
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 192/371 (51%), Gaps = 27/371 (7%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +VT LE+G+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E+ N Q ++ + +H+T Y ALG +L P + + L + + ++
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSD--------LPRLPPPTEPKSVYIGGDYRQQADS- 303
PR+VLAA+ GV DELL +A+ D +P LPP + G + R + D
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPP-----CKFTGSEIRVRDDKM 291
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGG-SFSAGGPGKGMHTRLYLRVLNEYQ 362
P H+A+A E GW + I L V L+G SF G GM+ L L +
Sbjct: 292 PLAHLAIAVEAV-GW-AHPDTICLMVANTLIGNWDRSF-----GGGMNLSSKLAQLTCHG 344
Query: 363 QI-QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ SF +FN+ + +TGL+G+Y V+ + +V +E + + T VT+ ++ RA+
Sbjct: 345 NLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCT--SVTESEVARARN 402
Query: 422 ATKSAVLMNLE 432
K+ +L+ L+
Sbjct: 403 LLKTNMLLQLD 413
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 191/371 (51%), Gaps = 27/371 (7%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS
Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E+ N Q ++ + +H+T Y ALG +L P + ++ L + + ++
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 236
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSD--------LPRLPPPTEPKSVYIGGDYRQQADS- 303
PR+VLAA+ GV +ELL +A+ D +P LPP + G + R + D
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGAIPALPP-----CKFTGSEIRVRDDKM 291
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGG-SFSAGGPGKGMHTRLYLRVLNEYQ 362
P H+A+A E GW + I L V L+G SF G GM+ L L +
Sbjct: 292 PLAHLAIAVEAV-GW-AHPDTICLMVANTLIGNWDRSF-----GGGMNLSSKLAQLTCHG 344
Query: 363 QI-QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ SF +FN+ + +TGL+G+Y V+ + +V E + T VT+ ++ RAK
Sbjct: 345 NLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCT--DVTESEVARAKN 402
Query: 422 ATKSAVLMNLE 432
K+ +L+ L+
Sbjct: 403 LLKTNMLLQLD 413
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 193/371 (52%), Gaps = 27/371 (7%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +VT LENG+R+ASE S ++GL++D GS YE + G ++ LE MAFK TK RS
Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
L + E+E +G + A SREQ Y A +P VE+L D ++N + E+ E
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E+ N Q ++ + +H+T Y ALG +L P + + L + + ++
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 254 PRMVLAAS-GVDLDELLPIA-----EPLLS---DLPRLPPPTEPKSVYIGGDYRQQADS- 303
PR+VLAA+ GV +ELL +A + L + D+P LPP + G + R + D
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCAHKGDVPALPP-----CKFTGSEIRVRDDKM 291
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGG-SFSAGGPGKGMHTRLYLRVLNEYQ 362
P H+A+A E GW + I L V L+G SF G GM+ L L +
Sbjct: 292 PLAHLAVAIEAV-GW-THPDTICLMVANTLIGNWDRSF-----GGGMNLSSKLAQLTCHG 344
Query: 363 QI-QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
+ SF +FN+ + +TGL+G+Y V+ + V +E + + T V++ ++ RAK
Sbjct: 345 NLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTA--VSESEVARAKN 402
Query: 422 ATKSAVLMNLE 432
K+ +L+ L+
Sbjct: 403 LLKTNMLLQLD 413
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 201/369 (54%), Gaps = 20/369 (5%)
Query: 75 KVKVTTLENGIRIASETSVS-PAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
+ +VTTL NG+R+A+E+++S A++G+++D GS +E+ + G ++ LE M FK T R+
Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT 155
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
+ E+E IGG + A SREQ Y L + V + +++L D ++N F + +N E
Sbjct: 156 VRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRER 215
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFT 252
+ E+ E+ ++L+ +H+T + LG +L P + + L+ + ++T
Sbjct: 216 DVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYT 275
Query: 253 APRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPT------EPKSVYIGGDYRQQADS-P 304
A RMV+AA+G V +E++ + L + L P T EP S + G + R D P
Sbjct: 276 ASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPAS-FTGSEVRMIDDDLP 334
Query: 305 ETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRV-LNEYQQ 363
A+AFE G D +++ L V+Q ++G + GG GK + + L RV +NE
Sbjct: 335 LAQFAVAFE--GASWTDPDSVALMVMQTMLGSWNK-NVGG-GKHVGSDLTQRVAINEIA- 389
Query: 364 IQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEAT 423
+S AFN+ + +TGLFG+YA +D + ++ E+ +A +V+ + RA+
Sbjct: 390 -ESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQL 446
Query: 424 KSAVLMNLE 432
KS++L++++
Sbjct: 447 KSSLLLHMD 455
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 183/372 (49%), Gaps = 9/372 (2%)
Query: 62 SFPPSLPDFVEPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLL 121
S P +P ++P +++ T L NG+ IAS + +P + IGL++ GS YE + G S+LL
Sbjct: 25 SAPGGVP--LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLL 82
Query: 122 EKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRN 181
+ +TK S +I R +EA+GG + +A+RE M Y+ + ++ + ++E L++
Sbjct: 83 RLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTA 142
Query: 182 PVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGT 241
P F WEV +LK + NPQ ++E +H Y AL NPL P+ + ++
Sbjct: 143 PEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMGKITSE 202
Query: 242 ILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQA 301
L V +FT+ RM L GV L +AE L+ L K+ Y GG+ R+Q
Sbjct: 203 ELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLNIRGGLGLAG-AKAKYRGGEIREQN 261
Query: 302 DSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEY 361
H A+ E + + EA +VLQ L+G G G + L V
Sbjct: 262 GDNLVHAAIVAE--SAAIGNAEANAFSVLQHLLGAGPHIKRGNNTTSL---LSQSVAKGS 316
Query: 362 QQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKE 421
QQ SAFN+ ++++GLFGIY + + ++ ++ +A ++ + AK
Sbjct: 317 QQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSADVQAAKN 375
Query: 422 ATKSAVLMNLES 433
K+ LM++E+
Sbjct: 376 KLKAGYLMSVET 387
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 208/414 (50%), Gaps = 19/414 (4%)
Query: 27 SGAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPPSLPDFVEPGKVKVTTLENGIR 86
+ +A R + G L +S +L L +F +L E +V+ L+NG+R
Sbjct: 2 AASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPE---TQVSILDNGLR 58
Query: 87 IASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGG 146
+ASE S ++G+++D GS YET + GA LE +AFK TKNR + +EVE+IG
Sbjct: 59 VASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGA 118
Query: 147 SILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNN 206
+ A ++RE Y AL +P++VELL D V+N D ++ +E + E+ E +
Sbjct: 119 HLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDAS 178
Query: 207 PQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAAS-GVD 264
Q ++ + +H+T + G L + P + RL T L + + ++ APRMVLAA+ GV+
Sbjct: 179 MQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVE 238
Query: 265 LDELLPIAEPLLSDLPRL----PPPTEPKSVYIGGDYRQQADS-PETHIALAFEVPGGWL 319
+LL +A+ LS + R+ P + G + R + D+ P H+A+A E P GW
Sbjct: 239 HQQLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGP-GW- 296
Query: 320 KDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYL-RVLNEYQQIQSFSAFNSIFNNTG 378
+ + + L V ++G G G+H L V + QSF FN +++TG
Sbjct: 297 ANPDNVTLQVANAIIGHYDCTYGG----GVHLSSPLASVAVANKLCQSFQTFNISYSDTG 352
Query: 379 LFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLE 432
L G + + + V + + + + T T+ ++ R K ++A++ +L+
Sbjct: 353 LLGAHFVCDAMSIDDMVFFLQGQWMRLCT--SATESEVTRGKNILRNALVSHLD 404
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 192/366 (52%), Gaps = 16/366 (4%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +V+ L+NG+R+ASE S P ++G+++D GS YET + GA LE +AFK TKNR
Sbjct: 47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
+ +EVE+IG + A ++RE Y AL +P++VELL D V+N D ++ +E
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERD 166
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E + Q ++ + +H+T + G L + P + RL T L + ++ ++ A
Sbjct: 167 VILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKA 226
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSDLPRL----PPPTEPKSVYIGGDYRQQADS-PETH 307
PRMVLAA+ GV +LL +A+ S + ++ P+ + G + R + D+ P H
Sbjct: 227 PRMVLAAAGGVKHQQLLDLAQDHFSSVSQVYEEDAVPSITPCRFTGSEIRHRDDALPLAH 286
Query: 308 IALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYL-RVLNEYQQIQS 366
+A+A E P GW + + + L V ++G G G+H L V + QS
Sbjct: 287 VAIAVEGP-GW-ANPDNVALQVANAIIGHYDCTYGG----GVHLSSPLASVAVANKLCQS 340
Query: 367 FSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSA 426
F FN ++ TGL G + + + + + + + + T T+ ++ R K ++A
Sbjct: 341 FQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCT--SATESEVTRGKNILRNA 398
Query: 427 VLMNLE 432
++ +L+
Sbjct: 399 LISHLD 404
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 178/360 (49%), Gaps = 11/360 (3%)
Query: 76 VKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHL 135
++ T L NG+ IAS + SP + IGL++ GS YE S+ G ++LL + +TK S
Sbjct: 38 LEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSF 97
Query: 136 RIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRK 195
+I R +EA+GG + +A+RE M Y+ + L+ V ++E L++ P F WEV + +
Sbjct: 98 KITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQ 157
Query: 196 LKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
LK + NPQ ++E +H+ Y AL NPL P+ + ++ L V +FT+ R
Sbjct: 158 LKIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSAR 217
Query: 256 MVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFE-- 313
M L GV L +AE L+ L + K+ Y GG+ R+Q H A E
Sbjct: 218 MALIGLGVSHPVLKQVAEQFLNMRGGL-GLSGAKANYRGGEIREQNGDSLVHAAFVAESA 276
Query: 314 VPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSI 373
V G EA +VLQ ++G G G + L+ V QQ SAFN+
Sbjct: 277 VAG----SAEANAFSVLQHVLGAGPHVK---RGSNTTSHLHQAVAKATQQPFDVSAFNAS 329
Query: 374 FNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLES 433
++++GLFGIY + + + ++ IA ++ + AK K+ LM++ES
Sbjct: 330 YSDSGLFGIYTISQATAAGDVIKAAYNQVKTIA-QGNLSNTDVQAAKNKLKAGYLMSVES 388
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 9/370 (2%)
Query: 64 PPSLPDFVEPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEK 123
P +P ++P ++ T L NG+ IAS + +P + IGL++ GS YE ++ G S+LL
Sbjct: 28 PGGVP--LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRL 85
Query: 124 MAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPV 183
+ +TK S +I R +EA+GG + +A+RE M Y+ + +++ + ++E L++ P
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPE 145
Query: 184 FLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTIL 243
F WEV +LK + N Q ++E +H Y AL NPL P+ + ++ L
Sbjct: 146 FRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEEL 205
Query: 244 EEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADS 303
V +FT+ RM L GV L +AE L+ L K+ Y GG+ R+Q
Sbjct: 206 HYFVQNHFTSARMALVGLGVSHSVLKQVAEQFLNMRGGLGLAG-AKAKYRGGEIREQNGD 264
Query: 304 PETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQ 363
H A+ E + + EA +VLQ L+G G G + L V Q
Sbjct: 265 NLVHAAIVAE--SAAIGNAEANAFSVLQHLLGAGPHIKRGNNTTSL---LSQSVAKGSHQ 319
Query: 364 IQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEAT 423
SAFN+ ++++GLFGIY + + + ++ ++ +A ++ + AK
Sbjct: 320 PFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQG-NLSSADVQAAKNKL 378
Query: 424 KSAVLMNLES 433
K+ LM++E+
Sbjct: 379 KAGYLMSVET 388
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 177/362 (48%), Gaps = 7/362 (1%)
Query: 72 EPGKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKN 131
P ++ T L NG+ IAS + +PA+ IGL++ GS YE ++ G S+LL + +TK
Sbjct: 34 HPQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKG 93
Query: 132 RSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 191
S +I R +EA+GG + +++RE M Y+ + L+ V ++E L++ P F WEV
Sbjct: 94 ASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAA 153
Query: 192 ELRKLKSELGELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENF 251
+L+ + NPQ ++E +H+ Y AL N L P+ + ++ L + V +F
Sbjct: 154 LQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVELHDYVQNHF 213
Query: 252 TAPRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALA 311
T+ RM L GV L +AE L+ L + K+ Y GG+ R+Q H AL
Sbjct: 214 TSARMALIGLGVSHPVLKQVAEQFLNIRGGL-GLSGAKAKYHGGEIREQNGDSLVHAALV 272
Query: 312 FEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFN 371
E + EA +VLQ ++G G G + LY V Q SAFN
Sbjct: 273 AE--SAAIGSAEANAFSVLQHVLGAGPHVKRGSNAT---SSLYQAVAKGVHQPFDVSAFN 327
Query: 372 SIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNL 431
+ ++++GLFG Y + + + ++ IA ++ + AK K+ LM++
Sbjct: 328 ASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKNKLKAGYLMSV 386
Query: 432 ES 433
ES
Sbjct: 387 ES 388
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 209/370 (56%), Gaps = 12/370 (3%)
Query: 77 KVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
K+++L NG+++A+ + +++GLY+D GS +E + G +++L+++AFKST++
Sbjct: 20 KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
+ +E +GG+ ++SRE + Y V +M++L+ + VR P + E+ E+
Sbjct: 80 MAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSA 139
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
+ E+ E+ P+ +L E +H+ Y+G LG+PL+ P + + L + + +T
Sbjct: 140 EYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPEN 199
Query: 256 MVLAASGVDLDELLPIAEPLLSDLPRLPPP-TEPKSVYIGGDYRQQ-----ADSPET-HI 308
V A GV ++ L + E L D PP T+ + Y GG+ + PE HI
Sbjct: 200 TVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELFHI 259
Query: 309 ALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFS 368
+ FE G + + L LQ L+GGGGSFSAGGPGKGM++RLY VLN+Y +++
Sbjct: 260 QIGFE--GLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCV 317
Query: 369 AFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPK--QVTQVQLNRAKEATKSA 426
AFN ++++G+FGI +AV+++ +++ K ++T+ +++RAK KS+
Sbjct: 318 AFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSS 377
Query: 427 VLMNLESRKI 436
+LMNLES+ +
Sbjct: 378 LLMNLESKLV 387
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 220/436 (50%), Gaps = 33/436 (7%)
Query: 27 SGAAAVRPS--SPGFFSWLTGEQSSSLPSLDTPLEGVSFPP-SLPDFVEPGKVKVTTLEN 83
S RP SP + +G ++P L +PL GV P + D E + KVTTL+N
Sbjct: 15 SAVLCARPRFGSPAHRRFSSGATYPNIP-LSSPLPGVPKPIFATVDGQEKFETKVTTLDN 73
Query: 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKST-KNRSHLRIVREVE 142
G+R+AS+ ++G+ ++ GS YE G ++ LEK+AF ST + S I+ +E
Sbjct: 74 GLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLE 133
Query: 143 AIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGE 202
GG SR+ Y+ A + +V+LL D V +P D E+ ++ EL +
Sbjct: 134 KHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMTRMAVQFELED 193
Query: 203 LHN--NPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLA 259
L+ +P+ LL E IH + +G P + ++D +L + +T RMVLA
Sbjct: 194 LNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKNYYTPDRMVLA 253
Query: 260 ASGVDLDELLPIAEPLLSDLPRLPPPTEPKSV--------YIGGDYRQQADS-------- 303
GV+ + L+ A L P P +V Y GG + + D
Sbjct: 254 GVGVEHEHLVECARKYLVGAE--PAWGAPGTVDVDRSVAQYTGGIIKVERDMSNVSLGPT 311
Query: 304 --PE-THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNE 360
PE THI + E +L+D + I VL ++MGGGGSFSAGGPGKGM +RLYL VLN
Sbjct: 312 PIPELTHIMVGLE-SCSFLED-DFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNR 369
Query: 361 YQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAK 420
+ + + ++++ + +TGL I+A V + V+++ +E IL+ + V V+L RAK
Sbjct: 370 HHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG--RTVDLVELERAK 427
Query: 421 EATKSAVLMNLESRKI 436
S ++MNLESR +
Sbjct: 428 TQLMSMLMMNLESRPV 443
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 217/431 (50%), Gaps = 27/431 (6%)
Query: 28 GAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPP-SLPDFVEPGKVKVTTLENGIR 86
G + +R P + + +G ++P L +PL GV P + D E + KVTTL+NG+R
Sbjct: 19 GCSRLRFGPPAYRRFSSGGAYPNIP-LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLR 77
Query: 87 IASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKST-KNRSHLRIVREVEAIG 145
+AS+ ++G+ ++ GS YE G ++ LEK+AF ST + S I+ +E G
Sbjct: 78 VASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHG 137
Query: 146 GSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELH- 204
G SR+ Y+ A + +V LL D V P D EV ++ EL +L+
Sbjct: 138 GICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEEVEMTRMTVQFELEDLNL 197
Query: 205 -NNPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG 262
+P+ LL E IH Y +G P + +++ +L + +T RMVLA G
Sbjct: 198 RPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHSYLRNYYTPDRMVLAGVG 257
Query: 263 VDLDELLPIAEPLLSDLPRLPPPTEPKSV------YIGGDYRQQADS----------PE- 305
V+ + L+ A L + E + Y GG +++ D PE
Sbjct: 258 VEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGIAKRERDMSNVSLGPTPIPEL 317
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
THI + E +++ I VL ++MGGGGSFSAGGPGKGM +RLYL VLN + +
Sbjct: 318 THIMVGLE--SCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMY 375
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
+ ++++ + +TGL I+A V + V+++ +E IL++ V V+L RAK S
Sbjct: 376 NATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMS--GTVDAVELERAKTQLTS 433
Query: 426 AVLMNLESRKI 436
++MNLESR +
Sbjct: 434 MLMMNLESRPV 444
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/431 (32%), Positives = 217/431 (50%), Gaps = 27/431 (6%)
Query: 28 GAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPP-SLPDFVEPGKVKVTTLENGIR 86
G + R P + + +G ++P L +PL GV P + D E + KVTTL+NG+R
Sbjct: 19 GRSRPRFGDPAYRRFSSGGAYPNIP-LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLR 77
Query: 87 IASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKN-RSHLRIVREVEAIG 145
+AS+ ++G+ ++ GS YE G ++ LEK+AF ST+ S I+ +E G
Sbjct: 78 VASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTERFDSKDEILLTLEKHG 137
Query: 146 GSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHN 205
G SR+ Y+ A + +V LL D V +P D E+ ++ EL +L+
Sbjct: 138 GICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMARMAVQFELEDLNM 197
Query: 206 --NPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG 262
+P+ LL E +H Y +G P + ++D +L + +T RMVLA G
Sbjct: 198 RPDPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMDRDVLHAYLRNYYTPDRMVLAGVG 257
Query: 263 VDLDELLPIAEP-LLSDLPRLPPPTE---PKSV--YIGGDYRQQADS----------PE- 305
V+ +L+ A LL P +SV Y GG + + D PE
Sbjct: 258 VEHAQLVECARKYLLGTCPAWGTGAAVHVDRSVAQYTGGIVKLERDMSNVSLGPTPFPEL 317
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
THI + E + + I VL ++MGGGGSFSAGGPGKGM TRLYL VLN + +
Sbjct: 318 THIMIGLE--SCSFLEGDFIPFAVLNMMMGGGGSFSAGGPGKGMFTRLYLNVLNRHHWMY 375
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
+ ++++ + +TGL I+A V + V++V RE +L+A V V+L RAK S
Sbjct: 376 NATSYHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMAGTVDV--VELERAKTQLTS 433
Query: 426 AVLMNLESRKI 436
++MNLE+R +
Sbjct: 434 MLMMNLEARPV 444
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 191/374 (51%), Gaps = 15/374 (4%)
Query: 74 GKVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
+V+ L+NG+ + + +G+Y+ GS YET G S+ ++++AF++T+
Sbjct: 52 NEVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTP 111
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
+ ++E +GG+ + S SRE M Y V M +LL + V P + ++
Sbjct: 112 VGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYR 171
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYA-GALGNPLLAPESALNRLDGTILEEIVAENFT 252
+ E EL P LL E H T + LGN LL +N + T + E + +
Sbjct: 172 DSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYR 231
Query: 253 APRMVLAASGVDLDELLPIAEPLLSDLP--RLPPPTEPKSVYIGGDYR-QQADSPE---- 305
+ LA +G+ + I + L LP LPP S Y GG +++++P
Sbjct: 232 PEHLTLAYAGIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAPPVPYQ 291
Query: 306 ---THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQ 362
TH+ +A E G + D + L LQ L+GGGGSFSAGGPGKGM++RLYL VLN+Y
Sbjct: 292 QEFTHVVIAME--GLPVTDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNVLNQYP 349
Query: 363 QIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEA 422
+++ AFN + ++GLFG++ D A L++RE L T VT + RAK
Sbjct: 350 WVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRE--LCNTVLSVTSEETERAKNQ 407
Query: 423 TKSAVLMNLESRKI 436
KS++LMNLESR I
Sbjct: 408 LKSSLLMNLESRMI 421
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 215/431 (49%), Gaps = 27/431 (6%)
Query: 28 GAAAVRPSSPGFFSWLTGEQSSSLPSLDTPLEGVSFPP-SLPDFVEPGKVKVTTLENGIR 86
G + +R P + + +G ++P L +PL GV P + D E + KVTTL+NG+R
Sbjct: 19 GCSRLRFGPPAYRRFSSGGAYPNIP-LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLR 77
Query: 87 IASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKST-KNRSHLRIVREVEAIG 145
+AS+ ++G+ ++ GS YE G ++ LEK+AF ST + S I+ +E G
Sbjct: 78 VASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHG 137
Query: 146 GSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELH- 204
G SR+ Y+ A + +V LL D V P D EV ++ EL +L+
Sbjct: 138 GICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMTRMAVQFELEDLNL 197
Query: 205 -NNPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASG 262
+P+ LL E IH Y +G P + +++ +L + +T RMVLA G
Sbjct: 198 RPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGVG 257
Query: 263 VDLDELLPIAEPLLSDLPRLPPPTEPKSV------YIGGDYRQQADS----------PE- 305
V+ + L+ A L + E + Y GG + + D PE
Sbjct: 258 VEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPEL 317
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
THI + E +++ I VL ++MGGGGSFSAGGPGKGM +RLYL VLN + +
Sbjct: 318 THIMVGLE--SCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMY 375
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
+ ++++ + +TGL I+A V + V+++ +E IL+ V V+L RAK S
Sbjct: 376 NATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG--GTVDTVELERAKTQLTS 433
Query: 426 AVLMNLESRKI 436
++MNLESR +
Sbjct: 434 MLMMNLESRPV 444
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 219/438 (50%), Gaps = 37/438 (8%)
Query: 27 SGAAAVRPS--SPGFFSWLTGEQSSSLPSLDTPLEGVSFPP-SLPDFVEPGKVKVTTLEN 83
S A RP SP + +G ++P L +PL GV P + D E + KVTTL+N
Sbjct: 15 SAALCARPKFGSPAHRRFSSGATYPNIP-LSSPLPGVPKPIFATVDGQEKFETKVTTLDN 73
Query: 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKST-KNRSHLRIVREVE 142
G+R+AS+ ++G+ ++ GS YE G ++ LEK+AF ST + S I+ +E
Sbjct: 74 GLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLE 133
Query: 143 AIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGE 202
GG SR+ Y+ A + +V LL D V +P D E+ ++ EL +
Sbjct: 134 KHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMTRMAVQFELED 193
Query: 203 LHN--NPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLA 259
L+ +P+ LL E IH + +G P + ++D +L + +T RMVLA
Sbjct: 194 LNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSYLKNYYTPDRMVLA 253
Query: 260 ASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYI---------GGDYRQQADSPETHIAL 310
GV+ + L+ A L L P P +V++ GG R + ET
Sbjct: 254 GVGVEHEHLVECARKYL--LGVQPAWGAPGAVWMLTAQWHSTRGGSSRWR----ETCQMS 307
Query: 311 AFEVP--------GG----WLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVL 358
A P GG L +++ I VL ++MGGGGSFSAGGPGKGM +RLYL VL
Sbjct: 308 ALRPPRFQSSHIYGGARELLLLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVL 367
Query: 359 NEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNR 418
N + + + ++++ + +TGL I+A V + V+++ +E IL+ + V V+L R
Sbjct: 368 NRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG--RTVDLVELER 425
Query: 419 AKEATKSAVLMNLESRKI 436
AK S ++MNLESR +
Sbjct: 426 AKTQLMSMLMMNLESRPV 443
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 190/369 (51%), Gaps = 18/369 (4%)
Query: 75 KVKVTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
K + TTL+NG+ +AS+ S + +++G+++D GS ET + G ++ LE +AFK T R+
Sbjct: 39 KTQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRT 98
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
++ E+E +G + A SRE Y AL VP+ V++L D ++N + + E
Sbjct: 99 QQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERER 158
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFT 252
+ E E+ + ++ + +H+T Y LG +L P + + T L + N+T
Sbjct: 159 DVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYT 218
Query: 253 APRMVL-AASGVDLDELLPIAEPLLSDLPRLPPP------TEPKSVYIGGDYRQQADS-P 304
A RMVL A GV ++L+ +A+ S LP P ++ K +IG D R + D+ P
Sbjct: 219 ADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDTIP 278
Query: 305 ETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQI 364
+IA+A E G D + V Q ++G P +G + ++++
Sbjct: 279 TANIAIAVE--GVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQGSKLSGF---VHKHDLA 333
Query: 365 QSFSAFNSIFNNTGLFGIYACTGS-DFVSKAVDLVVRELILIATPKQVTQVQLNRAKEAT 423
SF +F++ +++TGL+GIY T D V V +RE + + V++ ++ RAK
Sbjct: 334 TSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQL 391
Query: 424 KSAVLMNLE 432
K+++L++L+
Sbjct: 392 KASILLSLD 400
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 185/370 (50%), Gaps = 24/370 (6%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +V+ L+NG+R+ASE S P ++G+++D GS +ET + GA LE +AFK TKNR
Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
+ +EVE++G + A ++RE Y AL +P+ VELL D V+N D ++ +E
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERD 166
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ E + + ++ +H+T + G L + P + +L L E ++ ++ A
Sbjct: 167 VILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKA 226
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSDLPRL----PPPTEPKSVYIGGDYRQQADS-PETH 307
PRMVLAA+ GV+ +LL +A+ L +P PT + G + R + D+ P H
Sbjct: 227 PRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAH 286
Query: 308 IALAFEVPGGWLKDKEAI-----ILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQ 362
+A+A E PG D A+ I+ GGG S+ + +L
Sbjct: 287 VAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKL--------- 337
Query: 363 QIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEA 422
QSF F+ + TGL G + + + ++ + + + T T+ ++ R K
Sbjct: 338 -CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCT--SATESEVARGKNI 394
Query: 423 TKSAVLMNLE 432
++A++ +L+
Sbjct: 395 LRNALVSHLD 404
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 183/356 (51%), Gaps = 16/356 (4%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNR-S 133
+ K+TTL NGIR+A+E + AS+G+++D GSVYET + G ++ LE M FK T R +
Sbjct: 34 ETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIFKGTAKRPT 93
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
I E+E +GGS+ A SRE Y LK VP V++L D ++N F + +E
Sbjct: 94 PQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFETSLIEQER 153
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFT 252
+ SE + + ++ + +H+ + G ALG +L P + + ++E + EN+T
Sbjct: 154 DTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQEFINENYT 213
Query: 253 APRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSV-----YIGGDYRQQAD-SPE 305
R+V++A+G V+ ++L+ + +++ + K +IG + R + D P
Sbjct: 214 GDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELRVRDDEQPL 273
Query: 306 THIALAFE-VPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQI 364
H A+A +P W D + +L ++Q ++G A GK + + L V E
Sbjct: 274 IHFAVAVRALP--W-TDPDYFVLELIQTMIGNWNRGIAA--GKNIASNLGEIVATE-DLA 327
Query: 365 QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAK 420
+S+S F + + +TGLFG Y + V V +++E IAT +V+ N+ K
Sbjct: 328 ESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQK 383
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 181/370 (48%), Gaps = 24/370 (6%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+ +V+ L+NG+R+ASE S P ++G+++D GS YE+ + GA +E +AFK TKNR
Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG 106
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
+ +EVE++G + A ++RE Y AL +P+ VELL D V+N D ++ +E
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERD 166
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ EL E + + ++ +H+T + G L + P + +L L E ++ ++ A
Sbjct: 167 VILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKA 226
Query: 254 PRMVLAAS-GVDLDELLPIAEPLLSDLP----RLPPPTEPKSVYIGGDYRQQADS-PETH 307
PRMVLAA+ G++ +LL +A+ S L PT + G + D P H
Sbjct: 227 PRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAH 286
Query: 308 IALAFEVPGGWLKDKEAI-----ILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQ 362
+A+A E PG D A+ I+ GGG S+ +L
Sbjct: 287 VAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKL--------- 337
Query: 363 QIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEA 422
QSF FN + +TGL G + + + ++ + + + T T+ ++ R K
Sbjct: 338 -CQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCT--SATESEVLRGKNL 394
Query: 423 TKSAVLMNLE 432
++A++ +L+
Sbjct: 395 LRNALVSHLD 404
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 188/377 (49%), Gaps = 33/377 (8%)
Query: 81 LENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVRE 140
L NG RIASE+ ++G+++D GS +ET + G ++ LE M FK T RS I
Sbjct: 32 LPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIEFG 91
Query: 141 VEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSEL 200
+E +G + A SRE Y K VPE V++L D + N + +++ E + + E
Sbjct: 92 MEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSKRTEQDLDAERQTIVQEK 151
Query: 201 GELHNNPQGLLLEAIHSTGYAGA-LGNPLLAP-ESALNRLDGTILEEIVAENFTAPRMVL 258
++ +L++ +HS + G+ LG +L P E+ + ++++ V ++T PRM L
Sbjct: 152 EDVEARIDEVLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRMAL 211
Query: 259 AASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQAD-SPETHIALAFEVPG 316
SG VD +L +A LP P + ++GGD R+ +P TH+A+AF+ PG
Sbjct: 212 VGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTRFLGGDKRETNQLNPLTHVAVAFQTPG 271
Query: 317 GWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQ------------- 363
+ +AI + VL+ L+ GS+S G+ ++ ++ ++
Sbjct: 272 --ISHPDAIKIKVLEQLL---GSYSR-DKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAG 325
Query: 364 ---IQSFSAFNSIFNNTGLFGIYACT--GSDFVSKAVDLV---VRELILIATPKQVTQVQ 415
I S +AF + +++ GL G YA G + + +++ +RELI ++ + +++ +
Sbjct: 326 HNPIHSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVS--RNISEEE 383
Query: 416 LNRAKEATKSAVLMNLE 432
RAK K ++ L+
Sbjct: 384 FERAKNQLKLQTMLQLD 400
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 189/369 (51%), Gaps = 17/369 (4%)
Query: 75 KVKVTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
K + TTL+NG+ +A+E + A++ + +D GS ET + GA++ LE +AFK TKNRS
Sbjct: 21 KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
+ E E G + A SREQ Y A K VP V +L D + N V E
Sbjct: 81 QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERER 140
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFT 252
+ + E E+ ++ + +H+T Y G LG +L P+ + L L + + +N+
Sbjct: 141 QVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYR 200
Query: 253 APRMVLAASG-VDLDELLPIAEPLLSDLP------RLPPPTEPKSVYIGGDYR-QQADSP 304
+ RM+++++G + +EL+ +AE L L P K ++G + R + DSP
Sbjct: 201 SDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPRFVGSEIRARDDDSP 260
Query: 305 ETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQI 364
+IA+A E G K + V+Q ++G A G + +RL ++ ++Q
Sbjct: 261 TANIAIAVE--GMSWKHPDYFTALVMQAIIGNWD--RAMGASPHLSSRLST-IVQQHQLA 315
Query: 365 QSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATK 424
SF +F++ +++TGL+GIY T + + + DLV L A T+ ++ RAK +
Sbjct: 316 NSFMSFSTSYSDTGLWGIYLVT--ENLGRIDDLVHFTLQNWARLTVATRAEVERAKAQLR 373
Query: 425 SAVLMNLES 433
+++L++L+S
Sbjct: 374 ASLLLSLDS 382
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 186/364 (51%), Gaps = 14/364 (3%)
Query: 75 KVKVTTLENGIRIASETSVSPA-ASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
K +VT L NG+ +A+E++ + A A++G+++D GS ET ++ G ++ LE ++FK TK R+
Sbjct: 34 KTQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRT 93
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
+ E+E +GG + A SREQ Y V + V +L D ++N ++ E
Sbjct: 94 QSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRER 153
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGY-AGALGNPLLAPESALNRLDGTILEEIVAENFT 252
+ E E+ + ++ + +H+ + ALG +L P+ + L L+ + N+T
Sbjct: 154 AVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYT 213
Query: 253 APRMVLAASG-VDLDELLPIAEPLLSDLPRLPPPTE-PKSVYIGGDYRQQADS-PETHIA 309
A RMV+ +G VD EL +AE LP+ + + + G D R + D P HIA
Sbjct: 214 ADRMVVVGAGNVDHAELCKLAETNFGKLPQGSGKAKFVRPAFTGSDVRIRVDDMPTAHIA 273
Query: 310 LAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSA 369
LA E W +L ++ GS+ ++L +++ ++ SF++
Sbjct: 274 LAVE-GASWTSADHWPLLVASAMI----GSYDRAAGNAHPSSKL-AQIVAKHNLANSFTS 327
Query: 370 FNSIFNNTGLFGIYACTGS-DFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVL 428
FN+ +++TGL+GIY + + D + VRE + +AT +V + AK+ K+++L
Sbjct: 328 FNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAI--AKQQLKTSLL 385
Query: 429 MNLE 432
+ L+
Sbjct: 386 LALD 389
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 15/364 (4%)
Query: 76 VKVTTLENGIRIASETS--VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRS 133
V+ TTL NG+++ S PA S+GLY+ GS ET + G + +L+ +AF+S N+
Sbjct: 22 VESTTLSNGLKVVSLVGGYTGPAVSLGLYIKTGSRNETQETAGLNQVLKGLAFESNTNKL 81
Query: 134 HLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL 193
+ + R++E G + A ASR+ + + L +M+ L + + P EV +
Sbjct: 82 GIEVQRDIEVSGSTAFAQASRDNLLIALQTLPNRSLQMLNNLANITK-PTLPYHEVRDVT 140
Query: 194 RKLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFT 252
+ E +++ + E++H T + G LG PL+AP L + + V +
Sbjct: 141 EIIVKESEAYNHDSYSSIFESVHQTAFRGKTLGRPLVAPICNLGNITKDAVTNWVNSTYK 200
Query: 253 APRMVLAASGVDLDELLPIAEPL-LSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALA 311
M+L G+ +EL+ AE + + + + YIGG+ + + S + + LA
Sbjct: 201 PSNMILVGVGLSHNELIEEAEKVTFGNDESSTSISNETAQYIGGESLKYS-SGNSKVVLA 259
Query: 312 FE-VPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAF 370
FE +KD A +VLQ ++G G +A PG G +RL+ N + S AF
Sbjct: 260 FEGTAQSNIKDVAA--FSVLQSILGNGCPKTA--PGHGRTSRLFSLTKNNSNIVNS-EAF 314
Query: 371 NSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMN 430
N + ++GLFG+ A V K V L+ E ++A K Q +L RAK TKS+VL
Sbjct: 315 NLTYGDSGLFGVVAEVEGATVGKTVSLITSE--IVAASKTAGQ-ELERAKAVTKSSVLEQ 371
Query: 431 LESR 434
ESR
Sbjct: 372 AESR 375
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 183/368 (49%), Gaps = 19/368 (5%)
Query: 77 KVTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHL 135
+++TL NG+ +A+E+ + A++G+++D GS ET + G ++ LE MAFK T RS
Sbjct: 30 EISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQH 89
Query: 136 RIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRK 195
+ EVE IG + A SREQ Y + VP V+++ D ++N + E
Sbjct: 90 ALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERERDV 149
Query: 196 LKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAP 254
+ E E+ + ++ + +H+ + G LG +L P++ + + L + N+TA
Sbjct: 150 ILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTAD 209
Query: 255 RMVLAAS-GVDLDELLPIAEPLLSDLPRLPPP-------TEPKSVYIGGDYRQQADS-PE 305
RMVL + GVD L+ +AE S LP P +E K ++G + R + D P
Sbjct: 210 RMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIRDDELPT 269
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
H+A+A E GW + + V+Q + G++ + + +++
Sbjct: 270 AHVAIAVE-GVGW-SSPDYFPMMVMQSIF---GNWDRSLGASSLLSSRLSHIISSNSLAN 324
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDF-VSKAVDLVVRELILIATPKQVTQVQLNRAKEATK 424
SF +F++ +++TGL+GIY + + + + ++E ++ T+ ++ RAK K
Sbjct: 325 SFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAP--TEGEVERAKSQLK 382
Query: 425 SAVLMNLE 432
+ +L++L+
Sbjct: 383 AGLLLSLD 390
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 187/372 (50%), Gaps = 18/372 (4%)
Query: 73 PGKVKVTTLENGIRIASE-TSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKN 131
PG + + L NG+ IA+E + +A++G+++D GS E + G ++ LE +AFK T+N
Sbjct: 24 PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQN 82
Query: 132 RSHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNE 191
RS I E+E IG + A SRE Y +L+ +P+ V++L D + V + +
Sbjct: 83 RSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIER 142
Query: 192 ELRKLKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAEN 250
E + E E+ ++ + +H Y LG +L P + + T L++ + +N
Sbjct: 143 ERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKN 202
Query: 251 FTAPRMVLAASG-VDLDELLPIAEPLLSDLPR------LPPPTEPKSVYIGGD-YRQQAD 302
+ RMVLA +G VD ++L+ A+ +P+ L P P V+ G+ + ++
Sbjct: 203 YKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENT 262
Query: 303 SPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQ 362
P THIA+A E G + + Q ++G A G G + L +
Sbjct: 263 LPTTHIAIALE--GVSWSAPDYFVALATQAIVGNWD--RAIGTGTNSPSPLAVAASQNGS 318
Query: 363 QIQSFSAFNSIFNNTGLFGIYACTGSD--FVSKAVDLVVRELILIATPKQVTQVQLNRAK 420
S+ +F++ + ++GL+G+Y T S+ V V+ +++E I + K ++ ++NRAK
Sbjct: 319 LANSYMSFSTSYADSGLWGMYIVTDSNEHNVQLIVNEILKEWKRIKSGK-ISDAEVNRAK 377
Query: 421 EATKSAVLMNLE 432
K+A+L++L+
Sbjct: 378 AQLKAALLLSLD 389
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 193/401 (48%), Gaps = 27/401 (6%)
Query: 48 SSSL-PSLDTPLEGVSFPPSLPDFVEPG-KVKVTTLENGIRIASETSVSPAASIGLYLDF 105
SS+L P+L++ + S S+ D + + +VTTL+NG R+ +E + S A++G++++
Sbjct: 8 SSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIET 67
Query: 106 GSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEAIGGSILASASREQMGYSFDALK 165
GS +E + G ++ LE++ K T R+ + E+ AIG + + R+Q A
Sbjct: 68 GSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGA 127
Query: 166 TYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGELHNNPQGLLLEAIHSTGYAGA-L 224
V ++V++L D +RN ++ E L EL + Q +L + +H+ G+ G L
Sbjct: 128 QDVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPL 187
Query: 225 GNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAASGVDLDELLPIAEPLLSDLPRLPP 284
+L ++ + L+E +++ RMVL+A G + + +A+ DL P
Sbjct: 188 ALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYP 247
Query: 285 PTEPK---SVYIGGDYRQQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFS 341
P+ + + G +YR + D+ H+ AF V G K+A+ L + +G
Sbjct: 248 RKVPQVDGTRFTGSEYRYRNDNV-PHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTH 306
Query: 342 AGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDL---- 397
A + +RL ++ +++ + + FN + +TGLFGIY FV+ A DL
Sbjct: 307 A--TSRTAASRLVQKIGHDH-GVHNLQHFNINYKDTGLFGIY------FVADAHDLNDTS 357
Query: 398 -----VVRELILIATPKQVTQVQLNRAKEATKSAVLMNLES 433
V E +A+ T+ ++ AK ++ + NLE+
Sbjct: 358 GIMKSVAHEWKHLASA--ATEEEVAMAKNQFRTNLYQNLET 396
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 170/360 (47%), Gaps = 21/360 (5%)
Query: 78 VTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
++ L+NG+ + + + +I L GS YE G S+ LE MAFK T R+ +
Sbjct: 7 ISKLKNGLTVLTYNMPYVDSVAINLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAKQ 66
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
I E + IGG A E+ Y L + + +L D ++N +F + E+ +E + +
Sbjct: 67 IAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAKEYQVI 126
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
E+ +NP L+ E +S+ Y LG P+L L+ + +++ A
Sbjct: 127 LQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAGN 186
Query: 256 MVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEV 314
+ L+ +G VD D+++ AE L S L + + YIGG+ D +T + L FE
Sbjct: 187 LYLSVAGNVDHDKIVSSAERLFSSLKQGEKSNFLPAKYIGGNSFINKDLEQTTLILGFE- 245
Query: 315 PGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF 374
G + E + T L ++ GG GM +RL+ + + + ++NS +
Sbjct: 246 -GTPYINLERLYRTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYNSTY 294
Query: 375 NNTGLFGIYACTGSDFVSKAVDLVVRELI--LIATPKQVTQVQLNRAKEATKSAVLMNLE 432
+++G+F IYA T D ++L+ +EL + ++V + ++ RAK +S +LM E
Sbjct: 295 SDSGVFTIYASTAHD----KLELLYKELKTEITKMTEKVNEEEMIRAKTQLRSNLLMAQE 350
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 115/203 (56%), Gaps = 1/203 (0%)
Query: 78 VTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRI 137
+TTL NG+R+ASE + +G+Y+D GS YE GAS++++++AFKST R+ +
Sbjct: 54 ITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTADEM 113
Query: 138 VREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLK 197
+ VE +GG+I ++SRE M Y +P VEL+ + +R+P D E+ ++ +
Sbjct: 114 LETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIMTAQ 173
Query: 198 SELGELHNNPQGLLLEAIHSTGYA-GALGNPLLAPESALNRLDGTILEEIVAENFTAPRM 256
E+ E+ + + +L E +H + LGNPLL P+ L+ ++ +++ + R+
Sbjct: 174 YEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRPERL 233
Query: 257 VLAASGVDLDELLPIAEPLLSDL 279
V+A +GV + + +AE D+
Sbjct: 234 VVAFAGVPHERAVKLAEKYFGDM 256
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 27/145 (18%)
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
THI LAFE G + D + L LQ L+GGGGSFSAGGPGKGM++RLY VLN++ ++
Sbjct: 357 THIQLAFE--GLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGWVE 414
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIAT--------------PKQV 411
S AFN + ++GLFGI A + ++ REL + T K
Sbjct: 415 SCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKN- 473
Query: 412 TQVQLNRAKEATKSAVLMNLESRKI 436
QL +S++LMNLESR +
Sbjct: 474 ---QL-------RSSLLMNLESRMV 488
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 167/360 (46%), Gaps = 21/360 (5%)
Query: 78 VTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
V+ L+NG+ I + + +I L GS YE P G ++ LE MAFK TK R+ +
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVAINLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQ 66
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
I E ++IGG A E+ Y L + + ++ D V+N F + E+ +E + +
Sbjct: 67 IAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQVI 126
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
E+ +NP L+ E +++ + LG P+L + + + +++ A
Sbjct: 127 LQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAEN 186
Query: 256 MVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEV 314
L+ +G VD +E++ AE L S L + + YIGG D +T + L FE
Sbjct: 187 FYLSIAGNVDHEEIVKEAERLFSSLTQGEKSNFSPAKYIGGHSFINKDLEQTTLILGFE- 245
Query: 315 PGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF 374
G + E + T L ++ GG GM +RL+ + + + ++NS +
Sbjct: 246 -GTSYINLERLYQTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYNSPY 294
Query: 375 NNTGLFGIYACTGSDFVSKAVDLVVRELI--LIATPKQVTQVQLNRAKEATKSAVLMNLE 432
++G+F IYA T D ++L+ EL + +QV Q ++ RA+ +S + M E
Sbjct: 295 FDSGVFTIYASTAHD----KLELLAAELKNEIKRMAEQVKQEEIERARTQIRSNLQMAQE 350
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 21/357 (5%)
Query: 78 VTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
V+ L+NG+ I + + +I L G+ YE G S+ LE MAFK TK R+ +
Sbjct: 7 VSKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQ 66
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
I E ++IGG A E Y L + + +L D ++N +F D E+ +E + +
Sbjct: 67 IAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAKEYQII 126
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
E+ H+NP L+ E ++T Y G LG +L L + +++ A
Sbjct: 127 MQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAEN 186
Query: 256 MVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEV 314
+ L+ +G ++ ++++ IAE L + L + + + YIGG + +T + L FE
Sbjct: 187 LYLSIAGNIEHNKIVMIAEELFASLKQGVKSSFIPAKYIGGKGFIHKELEQTSLVLGFEC 246
Query: 315 PGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF 374
++ + +L ++ GG GM +RL+ + + ++NS +
Sbjct: 247 T-SYINLGQLYQTYLLSIIFGG-----------GMSSRLFQSIREKLGLAYVVGSYNSAY 294
Query: 375 NNTGLFGIYACTGSDFVSKAVDLVVRELI--LIATPKQVTQVQLNRAKEATKSAVLM 429
++G+F IYA T + ++L+ RE+ +I + V+ ++ RAK +S + M
Sbjct: 295 FDSGVFTIYASTAHN----KLELLYREIKNEIIKITETVSTEEIIRAKMQLRSNLQM 347
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 21/357 (5%)
Query: 78 VTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
V+ L+NG+ I + + +I L G+ YE G S+ LE MAFK TK R+ +
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQ 66
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
I +AIGG A E Y L + + +L D ++N +F D E+ +E + +
Sbjct: 67 IAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQVI 126
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
E+ +NP L+ E ++ Y LG +L L + + + A
Sbjct: 127 MQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNAAN 186
Query: 256 MVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEV 314
+ L+ +G +D D+++ IAE L S L + + + YIGG+ + +T + L FE
Sbjct: 187 LYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNGFINKELEQTSLVLGFE- 245
Query: 315 PGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF 374
G + E + T L ++ GG GM +RL+ + + + ++NS +
Sbjct: 246 -GTSYINLEKLYQTHLLSIIFGG----------GMSSRLFQSIREKLGLAYAVGSYNSAY 294
Query: 375 NNTGLFGIYACTGSDFVSKAVDLVVRELI--LIATPKQVTQVQLNRAKEATKSAVLM 429
++G+F IYA T D ++L+ +E+ +I +QV+ ++ RAK +S + M
Sbjct: 295 FDSGVFTIYASTAHD----KLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSNLQM 347
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 166/355 (46%), Gaps = 17/355 (4%)
Query: 78 VTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLR 136
++ L+NG+ I + + +I L G+ YE G S+ LE MAFK TK R+ +
Sbjct: 7 ISKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQ 66
Query: 137 IVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKL 196
I E ++IGG A E Y L + + +L D ++N +F D E+++E + +
Sbjct: 67 IAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQII 126
Query: 197 KSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPR 255
E+ H+NP L+ E ++T Y LG +L L + + +++ A
Sbjct: 127 MQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAEN 186
Query: 256 MVLAASG-VDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEV 314
+ L+ +G ++ ++++ IAE L + L + + + YIGG + +T + L FE
Sbjct: 187 LYLSIAGNIEHNKIVIIAEELFASLKQGVTSSFIPAKYIGGKGFIHKELEQTSLVLGFEC 246
Query: 315 PGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIF 374
++ ++ +L ++ GGG S +RL+ + + ++NS +
Sbjct: 247 T-SYINLEKLYQTYLLSIIFGGGVS-----------SRLFQSIREKLGLAYVVGSYNSAY 294
Query: 375 NNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLM 429
++G+F IYA T + + + E+I I + V+ +L RAK +S + M
Sbjct: 295 FDSGVFTIYASTAHEKLELLYSEIKNEIIKI--TETVSTEELMRAKIQLRSNLQM 347
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 38/378 (10%)
Query: 74 GKVKVTTLENGIRIASETSVS-PAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNR 132
G V+ TTL G+RI +ET S +A+ G++ GS ETP+ GA++ LE + FK T+ R
Sbjct: 33 GTVRRTTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKR 92
Query: 133 SHLRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEE 192
S L I ++A+GG + A ++E Y L T +P ++++ D + + + +V+ E
Sbjct: 93 SALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVE 152
Query: 193 LRKLKSELGELHNNPQGLLLEAIHSTGYA-GALGNPLLAPESALNRLDGTILEEIVAENF 251
+ E+ ++P + + T + ALG P+L +N L + +++
Sbjct: 153 RGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHY 212
Query: 252 TAPRMVLAASG-VDLDELL---------------PIAEPLLSDLPRLPPPTEPKSVYIGG 295
+V+AA+G VD ++++ P A+PL R + IG
Sbjct: 213 DPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLAPRAGRRTVRAAGRVELIG- 271
Query: 296 DYRQQADSPETHIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYL 355
+ + H+ L PG D+ + VL +GG GM +RL+
Sbjct: 272 -----RKTEQAHVILGM--PGLARTDERRWAMGVLNTALGG-----------GMSSRLFQ 313
Query: 356 RVLNEYQQIQSFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQ 415
V + S ++ S F + GLFG+YA V + + EL +A +T +
Sbjct: 314 EVREKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDVLKICRDELDHVA-EHGLTDDE 372
Query: 416 LNRAKEATKSAVLMNLES 433
+ RA + + ++ LE
Sbjct: 373 IGRAVGQLQGSTVLGLED 390
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 75 KVKVTTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
K +++TL NGIR+ S+ + +IGLY++ G+ YE+P G NLLEKM FK TKN S
Sbjct: 143 KAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEKMTFKETKNNST 202
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
I++E+E I + +AS+SRE + S + L+ + ++ +L D +++P + + E+ E++
Sbjct: 203 SEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPTYSEEELREQIE 262
Query: 195 KLKSELGELHNNPQG-LLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFT 252
+ N+ L+ E + + A LGN ++A + L + + + +
Sbjct: 263 VCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATPEQYQNITREKLFDALRKYYV 322
Query: 253 APRMVLAASGVDLDELLPIAEPLLSDLP 280
+V++ +G + +++ + + D+P
Sbjct: 323 GKNIVISVTGAEHSQVIELVDKYFGDIP 350
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Query: 320 KDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSAFNSIFNNTGL 379
++K+ I VLQ L+GGG S+S GGPGKGM +RL L V+ ++++ AF +FN L
Sbjct: 463 ENKDIINGLVLQSLLGGGSSYSTGGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSL 522
Query: 380 FGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVLMNLESRKI 436
FGI T S F+ ++LV++EL+++ + +TQ +L RAK + KS +L NLE R +
Sbjct: 523 FGISLTTQSGFLQDGIELVLQELLMLRSS--MTQQELERAKRSQKSQILQNLEMRSV 577
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 27/367 (7%)
Query: 77 KVTTLENGIRIASE-TSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHL 135
+ TTL G+R+ +E +AS+G+++ GS E + GA++ LE + FKST RS +
Sbjct: 16 RRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAV 75
Query: 136 RIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRK 195
I + ++A+GG + A ++E Y L + +P V+L+ D V N +V E
Sbjct: 76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDV 135
Query: 196 LKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAP 254
+ E+ ++P+ L + + + +G P++ +++ + L+ +T
Sbjct: 136 VLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPE 195
Query: 255 RMVLAASG-VDLDELLP-IAEPLLSDLPRLPPPTEPK--SVYIGGDYR---QQADSPETH 307
RMV+AA+G VD D L+ + E S L R P P+ + + G R D+ +TH
Sbjct: 196 RMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRVNGSPRLTLVSRDAEQTH 255
Query: 308 IALAFEVPG-GWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQS 366
++L PG GW + L+VL +GG G+ +RL+ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 367 FSAFNSIFNNTGLFGIY-ACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
+ +F ++G +Y AC F V V +++ +T+ + AK + +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFAD--VMRVTADVLESVARDGITEAECGIAKGSLRG 359
Query: 426 AVLMNLE 432
+++ LE
Sbjct: 360 GLVLGLE 366
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 27/367 (7%)
Query: 77 KVTTLENGIRIASE-TSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHL 135
+ TTL G+R+ +E +AS+G+++ GS E + GA++ LE + FKST RS +
Sbjct: 16 RRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAV 75
Query: 136 RIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRK 195
I + ++A+GG + A ++E Y L + +P V+L+ D V N +V E
Sbjct: 76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDV 135
Query: 196 LKSELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAP 254
+ E+ ++P+ L + + + +G P++ +++ + L+ +T
Sbjct: 136 VLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPE 195
Query: 255 RMVLAASG-VDLDELLP-IAEPLLSDLPRLPPPTEPK--SVYIGGDYR---QQADSPETH 307
RMV+AA+G VD D L+ + E S L R P P+ + + G R D+ +TH
Sbjct: 196 RMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRVNGSPRLTLVSRDAEQTH 255
Query: 308 IALAFEVPG-GWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQS 366
++L PG GW + L+VL +GG G+ +RL+ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 367 FSAFNSIFNNTGLFGIY-ACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
+ +F ++G +Y AC F V V +++ +T+ + AK + +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFAD--VMRVTADVLESVARDGITEAECGIAKGSLRG 359
Query: 426 AVLMNLE 432
+++ LE
Sbjct: 360 GLVLGLE 366
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 170/368 (46%), Gaps = 31/368 (8%)
Query: 76 VKVTTLENGIRIASETS-VSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSH 134
+K T +NG+RI E + + +IG+++ GS +ETP G S+ LE M FK T +S
Sbjct: 2 IKRYTCQNGVRIVLENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSA 61
Query: 135 LRIVREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELR 194
I + IGG + A S+E Y L + +++L D + F + E+ +E
Sbjct: 62 REIAESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKN 121
Query: 195 KLKSELGELHNNPQGLLLEAIHSTGYAG-ALGNPLLAPESALNRLDGTILEEIVAENFTA 253
+ E+ + P ++ + + Y +LG P+L E L +G L + + + +T
Sbjct: 122 VVYEEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTP 181
Query: 254 PRMVLAASGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGD--------YRQQADSPE 305
R+V++ +G I++ + D+ + E K G + ++ ++ +
Sbjct: 182 DRVVISVAG-------NISDSFIKDVEKWFGSYEAKGKATGLEKPEFHTEKLTRKKETEQ 234
Query: 306 THIALAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQ 365
H+ L F+ G + + L VL ++GG M +RL+ V +
Sbjct: 235 AHLCLGFK--GLEVGHERIYDLIVLNNVLGG-----------SMSSRLFQDVREDKGLAY 281
Query: 366 SFSAFNSIFNNTGLFGIYACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKS 425
S +++S + ++G+ IY TG++ + + + ++E + +T +L +KE K
Sbjct: 282 SVYSYHSSYEDSGMLTIYGGTGANQLQQLSE-TIQETLATLKRDGITSKELENSKEQMKG 340
Query: 426 AVLMNLES 433
+++++LES
Sbjct: 341 SLMLSLES 348
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 167/364 (45%), Gaps = 25/364 (6%)
Query: 79 TTLENGIRIASET-SVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRI 137
TTL G+R+ +E +AS+G+++ GS E + GA++ LE + FKST R+ + I
Sbjct: 25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDI 84
Query: 138 VREVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLK 197
+ ++A+GG + A ++E Y L + + V+L+ D V N +V E +
Sbjct: 85 AQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVL 144
Query: 198 SELGELHNNPQGLLLEAIHSTGYAGA-LGNPLLAPESALNRLDGTILEEIVAENFTAPRM 256
E+ ++P+ L + + + +G P++ +++ + T L +T RM
Sbjct: 145 EEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERM 204
Query: 257 VLAASG-VDLDELLP-IAEPLLSDLPR---LPPPTEPKSVYIGGDYRQ--QADSPETHIA 309
V+A +G VD DE++ + E S L R PP + GG + D+ +TH+
Sbjct: 205 VVAVAGNVDHDEMVALVREHFGSRLIRGRQSAPPRKSTGRINGGPALTLGKRDAEQTHVL 264
Query: 310 LAFEVPGGWLKDKEAIILTVLQVLMGGGGSFSAGGPGKGMHTRLYLRVLNEYQQIQSFSA 369
L PG + + A L+VL +GG G+ +RL+ + S +
Sbjct: 265 LGVRTPGRSWEHRWA--LSVLHTALGG-----------GLSSRLFQEIRETRGLAYSVYS 311
Query: 370 FNSIFNNTGLFGIY-ACTGSDFVSKAVDLVVRELILIATPKQVTQVQLNRAKEATKSAVL 428
IF ++G +Y AC F V V+ E++ +T+ + AK + + ++
Sbjct: 312 ALDIFADSGALSVYAACLPGRFAD--VMQVISEVLASVAGDGITEAECRIAKGSLRGGII 369
Query: 429 MNLE 432
+ LE
Sbjct: 370 LGLE 373
>sp|Q6C2E3|QCR2_YARLI Cytochrome b-c1 complex subunit 2, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=QCR2 PE=3 SV=1
Length = 417
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEA 143
G+++A++ SP + + + L GS Y T G S++LEK AF++T +S LR VRE+E
Sbjct: 22 GVKVAAQDGQSPISDLSVVLRGGSRYAT--VPGVSHILEKFAFQNTVPKSALRFVRELEL 79
Query: 144 IGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNE------ELRKLK 197
GG + +RE + LK +P V+ + ++ F +E+ E EL LK
Sbjct: 80 FGGKLYTHTTREHIVLRTQFLKQDLPYFVDAFANVLKETKFQQFELTERVAPVAELDLLK 139
Query: 198 SELGELHNNPQGLLLEAIHSTGYAGALGNPLLA 230
E ++P LEA H + LGN + A
Sbjct: 140 RE-----SDPAFTALEAAHEVAFRTGLGNSVYA 167
>sp|P78761|QCR2_SCHPO Cytochrome b-c1 complex subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr2 PE=2 SV=2
Length = 426
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 16/259 (6%)
Query: 84 GIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIVREVEA 143
G+ A + + S+ + ++ GS Y+ G S+LLEK AFK+T+ RS LRI RE E
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQP--DAGVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 144 IGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEEL---RKLKSEL 200
+GG + +RE + + L Y+ LL + V FL +++ EE+ +++SEL
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147
Query: 201 GELHNNPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMVLAA 260
+ + + +H + +GN + P SA + +++ ++ + + +
Sbjct: 148 --FREDILRVAMAKLHEKAFHRGIGNEVYLPASASPSISE--IKDFASKAYVKSNFSVIS 203
Query: 261 SGVDLDELLPIAEPLLSDLPRLPPPTEPKSVYIGGDYRQQADSPETHIALAFEVPGGWLK 320
SG D+ + + + +P P + G+ R + + L F P +
Sbjct: 204 SGPDVQKASDLCAKYFAVIPDGSPLKSAPTKISSGESRVYSKG-TNYFCLGFPAPAASPE 262
Query: 321 DKEAIILTVLQVLMGGGGS 339
L VL ++GG +
Sbjct: 263 ------LFVLSSILGGDAA 275
>sp|P83782|QCR2_CANAL Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1
SV=2
Length = 374
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 79 TTLENGIRIASETSVSPAASIGLYLDFGSVYETPSSCGASNLLEKMAFKSTKNRSHLRIV 138
+++ N ++IA++ S + + + ++ + G S+LL K F + +S LR
Sbjct: 11 SSIPNSVKIAAKESATDLTKLSVIIN--NAGSKTGKSGVSHLLSKFTFLNNGAKSALRFT 68
Query: 139 REVEAIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKS 198
RE E +GG+ + +R+ + + LK +P VE L + V N F E NE + +
Sbjct: 69 RESELLGGTFESKVTRDALILNTTFLKQDLPYYVEALGNVVSNTQFAPHEFNEIVLPTAN 128
Query: 199 ELGELHN-NPQGLLLEAIHSTGYAGALGNPLLAPESALNRLDGTILEEIVAENFTAPRMV 257
+L N NP +E +H + LGNPL ES +L+ + + E F+ +
Sbjct: 129 AETKLANANPAFKGVEKLHEITFRRGLGNPLFYNESTPIKLEE--VAQFSKEQFSGENIS 186
Query: 258 LAASGVDLDELLP-IAEPLLSDLP 280
+ A G + ++L ++E LP
Sbjct: 187 IVAEGANEEDLTKFVSESAFCYLP 210
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 84 GIRIASETSVSPAASIGLYLDFGSVYE-TPSSCGASNLLEKMAFKSTKNRSHLRIVREVE 142
G+++AS P + + G+ YE P G + LE+ AFK+T R+ LRI RE E
Sbjct: 46 GVKVASRDDSGPTTRLAVVAKAGTRYEPLP---GLTVGLEEFAFKNTNKRTALRITRESE 102
Query: 143 AIGGSILASASREQMGYSFDALKTYVPEMVELLVDCVRNPVFLDWEVNEELRKLKSELGE 202
+GG + A +RE + L+ +P ELL + + + E +E + E +
Sbjct: 103 LLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHE-KQ 161
Query: 203 LHNNPQGLLLEAIHSTGYAGALGNPLL----APESALNRLDGTILEEIVAENFTAPRMVL 258
+ + L+A H+ + LG+PL P S+ L+ + + + +
Sbjct: 162 AKLDSAAIALDAAHNVAFHSGLGSPLYPTVDTPTSSY--LNENSVAAFANLAYNKANIAV 219
Query: 259 AASGVDLDELLPIAEPLLSDLPRLPPP--TEPKSVYIGGDYRQQADSPETHIALAFEVPG 316
A G L EP +P S Y GG+ R A + + I +AF PG
Sbjct: 220 VADGASQAGLEKWVEPFFKGVPATSSGNLNTAASKYFGGEQR-VAKNGKNAIVIAF--PG 276
Query: 317 GWL 319
L
Sbjct: 277 ASL 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,185,922
Number of Sequences: 539616
Number of extensions: 7393290
Number of successful extensions: 22474
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 22293
Number of HSP's gapped (non-prelim): 100
length of query: 436
length of database: 191,569,459
effective HSP length: 120
effective length of query: 316
effective length of database: 126,815,539
effective search space: 40073710324
effective search space used: 40073710324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)