Query 013784
Match_columns 436
No_of_seqs 343 out of 2510
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 17:03:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 5.5E-57 1.9E-61 455.6 30.1 313 67-392 2-314 (350)
2 1vhn_A Putative flavin oxidore 100.0 1.3E-52 4.5E-57 418.5 23.7 307 65-395 1-309 (318)
3 1z41_A YQJM, probable NADH-dep 100.0 1.5E-35 5.2E-40 297.7 24.8 242 58-308 7-319 (338)
4 2r14_A Morphinone reductase; H 100.0 5.7E-35 1.9E-39 297.2 22.1 237 58-308 13-340 (377)
5 1vyr_A Pentaerythritol tetrani 100.0 1.3E-34 4.4E-39 293.5 24.0 236 58-308 7-335 (364)
6 3gr7_A NADPH dehydrogenase; fl 100.0 3.1E-34 1.1E-38 288.2 24.1 242 58-308 7-319 (340)
7 2gou_A Oxidoreductase, FMN-bin 100.0 2.4E-34 8.1E-39 291.6 22.4 236 58-308 7-334 (365)
8 2hsa_B 12-oxophytodienoate red 100.0 7.4E-34 2.5E-38 291.1 23.0 246 58-309 20-361 (402)
9 1icp_A OPR1, 12-oxophytodienoa 100.0 5.1E-34 1.7E-38 290.2 21.2 239 58-308 18-342 (376)
10 3kru_A NADH:flavin oxidoreduct 100.0 2.1E-33 7.3E-38 282.0 23.0 241 58-308 6-319 (343)
11 3hgj_A Chromate reductase; TIM 100.0 2.4E-32 8.1E-37 275.5 25.0 244 58-309 6-331 (349)
12 3l5a_A NADH/flavin oxidoreduct 100.0 5.2E-33 1.8E-37 286.0 19.8 246 58-309 29-359 (419)
13 3gka_A N-ethylmaleimide reduct 100.0 3.3E-32 1.1E-36 274.9 21.1 231 58-309 14-329 (361)
14 3l5l_A Xenobiotic reductase A; 100.0 8.5E-32 2.9E-36 272.8 23.5 245 58-309 6-338 (363)
15 4ab4_A Xenobiotic reductase B; 100.0 5.7E-32 2E-36 273.2 21.6 230 58-308 6-320 (362)
16 1o94_A Tmadh, trimethylamine d 100.0 5.5E-31 1.9E-35 289.1 22.4 244 58-309 11-334 (729)
17 1ps9_A 2,4-dienoyl-COA reducta 100.0 5.5E-31 1.9E-35 286.5 21.3 246 58-308 7-322 (671)
18 3k30_A Histamine dehydrogenase 100.0 4.2E-31 1.4E-35 288.3 19.8 246 58-309 16-337 (690)
19 1jub_A Dihydroorotate dehydrog 100.0 3.9E-30 1.3E-34 255.1 21.6 232 59-306 3-282 (311)
20 2e6f_A Dihydroorotate dehydrog 100.0 5.9E-30 2E-34 254.1 20.9 233 59-306 5-284 (314)
21 3tjl_A NADPH dehydrogenase; OL 100.0 2E-30 6.9E-35 264.6 15.3 241 58-309 16-359 (407)
22 3aty_A Tcoye, prostaglandin F2 100.0 2.1E-29 7.3E-34 256.2 21.6 234 58-308 9-348 (379)
23 4ef8_A Dihydroorotate dehydrog 100.0 2.5E-29 8.5E-34 253.0 21.3 232 60-306 39-317 (354)
24 3oix_A Putative dihydroorotate 100.0 2.9E-28 9.9E-33 244.5 21.9 232 60-306 40-315 (345)
25 1f76_A Dihydroorotate dehydrog 100.0 1.8E-28 6.1E-33 245.8 18.5 231 58-307 45-330 (336)
26 3zwt_A Dihydroorotate dehydrog 99.9 2.1E-27 7.1E-32 240.4 18.1 229 60-306 52-338 (367)
27 1ep3_A Dihydroorotate dehydrog 99.9 8.6E-28 2.9E-32 237.6 13.1 228 59-306 8-280 (311)
28 4a3u_A NCR, NADH\:flavin oxido 99.9 9.4E-27 3.2E-31 235.3 18.9 239 58-309 6-328 (358)
29 1tv5_A Dhodehase, dihydroorota 99.9 8.3E-27 2.8E-31 240.7 18.2 230 59-306 83-413 (443)
30 4gbu_A NADPH dehydrogenase 1; 99.9 2.2E-26 7.5E-31 235.9 18.5 244 58-308 19-360 (400)
31 1gte_A Dihydropyrimidine dehyd 99.9 1.3E-25 4.6E-30 254.6 21.9 232 59-305 534-825 (1025)
32 3i65_A Dihydroorotate dehydrog 99.9 8.7E-26 3E-30 230.3 16.1 230 59-306 85-385 (415)
33 2nli_A Lactate oxidase; flavoe 99.9 1.4E-23 5E-28 212.6 18.4 252 60-355 72-357 (368)
34 1p0k_A Isopentenyl-diphosphate 99.9 4.4E-23 1.5E-27 207.8 18.9 259 59-355 46-324 (349)
35 2z6i_A Trans-2-enoyl-ACP reduc 99.9 3.8E-22 1.3E-26 199.6 18.8 192 65-305 9-200 (332)
36 3tjx_A Dihydroorotate dehydrog 99.9 9.2E-22 3.1E-26 198.5 20.1 232 61-306 40-317 (354)
37 1gox_A (S)-2-hydroxy-acid oxid 99.9 9.1E-22 3.1E-26 199.7 19.0 248 60-356 63-354 (370)
38 2nzl_A Hydroxyacid oxidase 1; 99.9 3.8E-22 1.3E-26 203.6 15.9 211 60-301 86-341 (392)
39 1kbi_A Cytochrome B2, L-LCR; f 99.9 5.8E-21 2E-25 200.9 18.2 212 59-301 180-437 (511)
40 1vcf_A Isopentenyl-diphosphate 99.8 1.3E-20 4.4E-25 188.6 16.4 217 60-302 50-291 (332)
41 3bw2_A 2-nitropropane dioxygen 99.8 6.3E-20 2.2E-24 186.0 20.7 198 68-306 10-247 (369)
42 3bo9_A Putative nitroalkan dio 99.8 3.8E-20 1.3E-24 184.7 18.4 195 62-305 20-214 (326)
43 2gjl_A Hypothetical protein PA 99.8 2.1E-19 7.3E-24 179.3 20.3 193 65-304 12-209 (328)
44 1p4c_A L(+)-mandelate dehydrog 99.8 2.5E-19 8.5E-24 182.3 17.2 249 60-356 64-352 (380)
45 3vkj_A Isopentenyl-diphosphate 99.8 1.7E-18 5.7E-23 175.2 14.7 218 60-301 51-301 (368)
46 1ypf_A GMP reductase; GUAC, pu 99.8 7.7E-18 2.6E-22 168.7 17.7 200 61-304 39-247 (336)
47 1eep_A Inosine 5'-monophosphat 99.8 7.7E-18 2.6E-22 172.7 17.6 207 62-306 35-295 (404)
48 3khj_A Inosine-5-monophosphate 99.7 2.4E-17 8.1E-22 166.5 16.2 202 63-306 40-246 (361)
49 3sr7_A Isopentenyl-diphosphate 99.7 1.6E-17 5.5E-22 167.6 14.4 219 60-301 78-312 (365)
50 3ffs_A Inosine-5-monophosphate 99.7 1.1E-16 3.7E-21 163.1 14.3 208 63-305 37-284 (400)
51 3r2g_A Inosine 5'-monophosphat 99.7 1.6E-16 5.3E-21 159.8 15.1 195 62-305 36-237 (361)
52 3sgz_A Hydroxyacid oxidase 2; 99.7 2.1E-16 7.3E-21 158.2 13.9 254 62-361 63-351 (352)
53 4fo4_A Inosine 5'-monophosphat 99.6 8.5E-16 2.9E-20 155.1 12.4 203 63-305 41-249 (366)
54 2qr6_A IMP dehydrogenase/GMP r 99.6 1.2E-14 4.2E-19 148.3 18.3 214 61-304 60-314 (393)
55 1mzh_A Deoxyribose-phosphate a 99.6 1.6E-15 5.6E-20 143.5 9.5 183 72-298 12-206 (225)
56 2c6q_A GMP reductase 2; TIM ba 99.5 5.7E-14 2E-18 141.3 15.5 203 63-304 52-260 (351)
57 4fxs_A Inosine-5'-monophosphat 99.5 1.6E-13 5.5E-18 144.0 15.0 129 141-304 234-371 (496)
58 4avf_A Inosine-5'-monophosphat 99.5 2.2E-13 7.5E-18 142.8 14.7 129 141-304 232-369 (490)
59 2yzr_A Pyridoxal biosynthesis 99.5 1.7E-13 5.7E-18 134.7 11.0 155 140-304 27-279 (330)
60 2uva_G Fatty acid synthase bet 99.4 7.3E-13 2.5E-17 157.4 15.8 202 68-305 582-804 (2060)
61 3o07_A Pyridoxine biosynthesis 99.4 1.2E-13 4E-18 132.2 7.0 145 141-304 22-237 (291)
62 1jvn_A Glutamine, bifunctional 99.4 3.7E-13 1.3E-17 143.1 9.6 208 84-307 285-537 (555)
63 2y88_A Phosphoribosyl isomeras 99.4 1.8E-12 6E-17 123.2 12.3 152 123-307 73-236 (244)
64 2agk_A 1-(5-phosphoribosyl)-5- 99.3 1.4E-12 4.8E-17 126.0 6.9 183 82-306 41-249 (260)
65 3usb_A Inosine-5'-monophosphat 99.3 1.7E-11 5.8E-16 129.1 14.6 127 141-304 259-396 (511)
66 1vzw_A Phosphoribosyl isomeras 99.3 2.8E-11 9.7E-16 115.0 13.7 152 123-307 74-233 (244)
67 2uv8_G Fatty acid synthase sub 99.2 4.1E-11 1.4E-15 142.0 12.1 202 68-305 589-811 (2051)
68 1thf_D HISF protein; thermophI 99.2 4.9E-10 1.7E-14 106.8 17.2 151 123-307 73-235 (253)
69 3tdn_A FLR symmetric alpha-bet 99.2 1.2E-11 4E-16 118.1 4.9 153 123-307 78-240 (247)
70 1vrd_A Inosine-5'-monophosphat 99.2 2.2E-10 7.6E-15 120.1 15.0 132 139-306 238-379 (494)
71 2qjg_A Putative aldolase MJ040 99.2 2.3E-10 7.8E-15 110.6 13.4 198 66-306 31-247 (273)
72 1jcn_A Inosine monophosphate d 99.1 5.6E-10 1.9E-14 117.6 16.5 136 140-306 257-397 (514)
73 1qo2_A Molecule: N-((5-phospho 99.1 3.1E-10 1E-14 107.8 12.2 187 82-305 33-232 (241)
74 1ka9_F Imidazole glycerol phos 99.1 8.6E-10 2.9E-14 105.1 13.9 151 123-307 74-236 (252)
75 1y0e_A Putative N-acetylmannos 99.1 1.3E-09 4.4E-14 102.0 14.4 109 181-309 105-216 (223)
76 1h5y_A HISF; histidine biosynt 99.1 3.8E-09 1.3E-13 99.8 16.5 187 83-305 37-236 (253)
77 1wv2_A Thiazole moeity, thiazo 99.1 2.1E-08 7.2E-13 95.3 21.5 208 58-301 9-221 (265)
78 2nv1_A Pyridoxal biosynthesis 99.0 5.1E-10 1.7E-14 110.3 9.8 164 125-304 22-246 (305)
79 3zen_D Fatty acid synthase; tr 99.0 3E-10 1E-14 139.0 9.8 196 68-304 427-654 (3089)
80 2w6r_A Imidazole glycerol phos 99.0 1.3E-09 4.4E-14 104.8 12.3 150 123-306 73-239 (266)
81 1ea0_A Glutamate synthase [NAD 99.0 1.3E-09 4.6E-14 124.5 14.3 111 178-301 976-1098(1479)
82 1ofd_A Ferredoxin-dependent gl 99.0 9.4E-09 3.2E-13 117.9 20.4 216 66-303 865-1135(1520)
83 1yxy_A Putative N-acetylmannos 99.0 1.4E-09 4.6E-14 102.8 11.3 102 182-306 120-224 (234)
84 3igs_A N-acetylmannosamine-6-p 99.0 2.6E-08 9E-13 94.3 18.2 77 221-309 144-222 (232)
85 1zfj_A Inosine monophosphate d 98.9 8.8E-09 3E-13 107.7 15.0 130 141-306 236-375 (491)
86 3q58_A N-acetylmannosamine-6-p 98.9 4.8E-08 1.6E-12 92.4 18.3 78 221-310 144-223 (229)
87 1xm3_A Thiazole biosynthesis p 98.9 3E-08 1E-12 95.7 17.1 209 58-304 2-215 (264)
88 1xg4_A Probable methylisocitra 98.9 1.1E-08 3.7E-13 100.2 13.9 204 76-301 21-240 (295)
89 4af0_A Inosine-5'-monophosphat 98.9 8.6E-08 3E-12 99.8 20.2 131 135-302 279-419 (556)
90 3tdn_A FLR symmetric alpha-bet 98.9 5.9E-09 2E-13 99.3 10.4 97 197-307 22-119 (247)
91 2pgw_A Muconate cycloisomerase 98.8 1.1E-07 3.6E-12 96.5 17.7 142 126-306 138-281 (384)
92 1me8_A Inosine-5'-monophosphat 98.7 2.3E-07 7.9E-12 97.4 15.2 108 182-302 270-387 (503)
93 1qo2_A Molecule: N-((5-phospho 98.6 4.3E-08 1.5E-12 92.9 7.4 100 197-308 13-114 (241)
94 2htm_A Thiazole biosynthesis p 98.6 2.3E-06 7.8E-11 81.6 19.0 206 59-301 3-212 (268)
95 2cu0_A Inosine-5'-monophosphat 98.6 7.5E-07 2.6E-11 93.1 16.2 46 256-302 318-363 (486)
96 1wa3_A 2-keto-3-deoxy-6-phosph 98.6 1.9E-07 6.5E-12 86.1 10.3 148 124-304 9-185 (205)
97 1rd5_A Tryptophan synthase alp 98.6 1.1E-06 3.9E-11 84.2 16.0 162 124-301 17-235 (262)
98 2zbt_A Pyridoxal biosynthesis 98.5 3.6E-07 1.2E-11 89.3 11.7 156 124-303 21-245 (297)
99 1geq_A Tryptophan synthase alp 98.5 4.9E-07 1.7E-11 85.8 12.0 166 124-302 4-226 (248)
100 1mdl_A Mandelate racemase; iso 98.5 1.3E-06 4.5E-11 87.6 15.6 140 124-301 133-275 (359)
101 2ovl_A Putative racemase; stru 98.5 1.3E-06 4.5E-11 88.0 14.1 132 135-304 146-280 (371)
102 2rdx_A Mandelate racemase/muco 98.5 2.8E-06 9.6E-11 85.8 16.5 137 126-304 136-275 (379)
103 1rvk_A Isomerase/lactonizing e 98.5 6.2E-06 2.1E-10 83.3 18.3 137 134-302 148-288 (382)
104 2nql_A AGR_PAT_674P, isomerase 98.4 2.9E-06 9.8E-11 86.1 15.0 141 125-305 153-297 (388)
105 2p8b_A Mandelate racemase/muco 98.4 5E-06 1.7E-10 83.6 16.3 144 123-305 129-276 (369)
106 2gl5_A Putative dehydratase pr 98.4 4.2E-06 1.5E-10 85.4 15.7 138 135-295 150-298 (410)
107 1thf_D HISF protein; thermophI 98.4 3.7E-07 1.3E-11 86.7 7.2 81 219-309 36-116 (253)
108 1qop_A Tryptophan synthase alp 98.4 9.2E-06 3.1E-10 78.3 16.5 167 124-301 16-239 (268)
109 4adt_A Pyridoxine biosynthetic 98.4 1.6E-05 5.5E-10 77.7 17.9 187 78-304 27-246 (297)
110 2qdd_A Mandelate racemase/muco 98.4 9.1E-06 3.1E-10 82.0 16.6 142 123-306 133-277 (378)
111 2hzg_A Mandelate racemase/muco 98.3 9.7E-06 3.3E-10 82.5 16.6 149 123-305 132-286 (401)
112 3eez_A Putative mandelate race 98.3 6.1E-06 2.1E-10 83.5 14.5 142 123-306 133-277 (378)
113 1ka9_F Imidazole glycerol phos 98.3 9.9E-07 3.4E-11 83.7 7.7 79 219-307 37-115 (252)
114 2v82_A 2-dehydro-3-deoxy-6-pho 98.3 5.6E-06 1.9E-10 76.6 12.6 139 123-302 5-182 (212)
115 1nu5_A Chloromuconate cycloiso 98.3 1.4E-05 4.6E-10 80.4 16.4 141 126-304 133-277 (370)
116 3ozy_A Putative mandelate race 98.3 1.9E-05 6.4E-10 80.2 16.8 135 125-298 139-279 (389)
117 2y88_A Phosphoribosyl isomeras 98.3 1.9E-06 6.6E-11 81.3 8.6 81 219-310 37-117 (244)
118 1tkk_A Similar to chloromucona 98.3 1.9E-05 6.6E-10 79.2 16.4 141 125-303 130-275 (366)
119 3vnd_A TSA, tryptophan synthas 98.2 9.1E-06 3.1E-10 78.4 13.1 169 123-301 16-240 (267)
120 2ps2_A Putative mandelate race 98.2 2.3E-05 7.9E-10 78.8 16.7 140 123-304 134-277 (371)
121 2qgy_A Enolase from the enviro 98.2 2.1E-05 7.1E-10 79.8 16.3 132 133-302 147-281 (391)
122 2poz_A Putative dehydratase; o 98.2 1.1E-05 3.6E-10 81.9 13.6 139 133-295 135-279 (392)
123 3qja_A IGPS, indole-3-glycerol 98.2 8.9E-05 3E-09 71.6 19.3 139 123-305 112-251 (272)
124 1vzw_A Phosphoribosyl isomeras 98.2 2.8E-06 9.6E-11 80.3 8.4 81 219-310 38-118 (244)
125 3nav_A Tryptophan synthase alp 98.2 1.8E-05 6E-10 76.5 13.0 169 125-301 20-242 (271)
126 3tsm_A IGPS, indole-3-glycerol 98.1 0.00033 1.1E-08 67.6 21.0 145 123-312 119-264 (272)
127 3f4w_A Putative hexulose 6 pho 98.1 2.5E-05 8.4E-10 72.0 12.4 143 124-304 53-195 (211)
128 2qq6_A Mandelate racemase/muco 98.1 4.8E-05 1.7E-09 77.5 15.7 133 135-295 149-290 (410)
129 2ox4_A Putative mandelate race 98.1 4.6E-05 1.6E-09 77.4 15.5 137 135-297 146-291 (403)
130 1h5y_A HISF; histidine biosynt 98.1 4.2E-06 1.4E-10 78.7 7.0 80 219-308 39-118 (253)
131 4gj1_A 1-(5-phosphoribosyl)-5- 98.1 1.7E-05 5.7E-10 75.5 11.2 148 125-303 74-231 (243)
132 2og9_A Mandelate racemase/muco 98.1 6.5E-05 2.2E-09 76.2 15.5 125 135-297 162-289 (393)
133 2qde_A Mandelate racemase/muco 98.1 6.1E-05 2.1E-09 76.5 15.3 135 125-298 135-272 (397)
134 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 5.8E-06 2E-10 76.7 6.7 148 124-301 12-184 (207)
135 2oz8_A MLL7089 protein; struct 98.0 0.00019 6.5E-09 72.6 18.1 124 135-296 145-273 (389)
136 3oa3_A Aldolase; structural ge 98.0 8.3E-05 2.8E-09 72.0 14.5 145 134-301 123-270 (288)
137 3ngj_A Deoxyribose-phosphate a 98.0 3.4E-05 1.2E-09 72.9 11.4 139 135-300 93-235 (239)
138 2p10_A MLL9387 protein; putati 98.0 9.1E-06 3.1E-10 78.2 7.3 160 124-303 94-266 (286)
139 3stp_A Galactonate dehydratase 98.0 7.3E-05 2.5E-09 76.4 14.4 146 123-300 166-315 (412)
140 3rcy_A Mandelate racemase/muco 98.0 0.00011 3.7E-09 75.6 15.8 142 134-302 145-290 (433)
141 1tzz_A Hypothetical protein L1 98.0 0.00011 3.7E-09 74.5 15.5 123 135-295 165-294 (392)
142 3ndo_A Deoxyribose-phosphate a 98.0 4.7E-05 1.6E-09 71.7 11.6 145 135-301 78-226 (231)
143 2pp0_A L-talarate/galactarate 98.0 0.00011 3.9E-09 74.5 15.4 124 135-296 175-301 (398)
144 2o56_A Putative mandelate race 98.0 0.00011 3.9E-09 74.7 15.3 135 135-295 152-295 (407)
145 2f6u_A GGGPS, (S)-3-O-geranylg 98.0 0.00011 3.9E-09 69.2 14.0 53 254-307 177-229 (234)
146 2gdq_A YITF; mandelate racemas 98.0 0.00013 4.5E-09 73.7 15.5 124 134-295 135-265 (382)
147 3r12_A Deoxyribose-phosphate a 98.0 9.9E-05 3.4E-09 70.5 13.6 141 135-301 109-252 (260)
148 3sjn_A Mandelate racemase/muco 97.9 5.3E-05 1.8E-09 76.4 12.3 125 136-295 147-274 (374)
149 1h1y_A D-ribulose-5-phosphate 97.9 0.00019 6.5E-09 67.2 14.8 145 124-305 64-210 (228)
150 1w8s_A FBP aldolase, fructose- 97.9 0.00018 6.1E-09 69.1 14.4 130 142-305 97-240 (263)
151 1vc4_A Indole-3-glycerol phosp 97.9 1.9E-05 6.5E-10 75.6 7.2 51 254-305 191-245 (254)
152 2ekc_A AQ_1548, tryptophan syn 97.9 0.00026 8.8E-09 67.9 15.1 164 127-302 19-240 (262)
153 3cwo_X Beta/alpha-barrel prote 97.9 6.2E-05 2.1E-09 69.2 10.1 75 223-307 140-214 (237)
154 1ub3_A Aldolase protein; schif 97.8 0.00022 7.6E-09 66.7 13.8 140 135-301 69-212 (220)
155 3rr1_A GALD, putative D-galact 97.8 0.0002 6.9E-09 73.0 14.5 145 123-297 113-260 (405)
156 2w6r_A Imidazole glycerol phos 97.8 1.6E-05 5.3E-10 76.0 5.8 80 219-308 36-118 (266)
157 4dwd_A Mandelate racemase/muco 97.8 0.00049 1.7E-08 69.8 17.1 141 123-295 124-270 (393)
158 2zad_A Muconate cycloisomerase 97.8 0.00064 2.2E-08 67.5 17.2 136 126-300 130-271 (345)
159 3bjs_A Mandelate racemase/muco 97.8 0.00015 5.1E-09 74.4 12.9 123 134-295 183-310 (428)
160 3ovp_A Ribulose-phosphate 3-ep 97.8 0.0006 2E-08 64.1 15.3 155 126-304 6-205 (228)
161 3jva_A Dipeptide epimerase; en 97.8 0.00074 2.5E-08 67.4 16.9 138 126-302 130-270 (354)
162 3ih1_A Methylisocitrate lyase; 97.8 0.00049 1.7E-08 67.4 15.1 200 76-301 33-248 (305)
163 3sbf_A Mandelate racemase / mu 97.8 0.00024 8.2E-09 72.3 13.5 154 123-299 121-285 (401)
164 1yad_A Regulatory protein TENI 97.8 5.1E-05 1.7E-09 70.6 7.7 74 223-304 127-200 (221)
165 1ujp_A Tryptophan synthase alp 97.7 0.00027 9.1E-09 68.2 12.6 163 126-302 17-235 (271)
166 1tqj_A Ribulose-phosphate 3-ep 97.7 0.00014 4.6E-09 68.5 10.2 155 127-305 7-210 (230)
167 3i4k_A Muconate lactonizing en 97.7 0.00074 2.5E-08 68.2 16.1 134 125-296 138-275 (383)
168 1rpx_A Protein (ribulose-phosp 97.7 0.0007 2.4E-08 63.1 14.8 143 124-305 68-216 (230)
169 3r4e_A Mandelate racemase/muco 97.7 0.0003 1E-08 72.0 13.1 148 123-296 131-301 (418)
170 4e5t_A Mandelate racemase / mu 97.7 0.00032 1.1E-08 71.4 13.2 136 134-296 150-289 (404)
171 2hxt_A L-fuconate dehydratase; 97.7 0.00053 1.8E-08 70.5 14.9 125 133-295 196-323 (441)
172 3eoo_A Methylisocitrate lyase; 97.6 0.00084 2.9E-08 65.5 14.8 203 76-301 26-244 (298)
173 3ro6_B Putative chloromuconate 97.6 0.00025 8.5E-09 70.9 11.3 138 124-300 129-270 (356)
174 3ajx_A 3-hexulose-6-phosphate 97.6 0.00093 3.2E-08 61.1 14.1 140 124-304 53-194 (207)
175 2qr6_A IMP dehydrogenase/GMP r 97.6 0.00018 6.2E-09 72.9 10.0 103 178-299 140-242 (393)
176 4e4u_A Mandalate racemase/muco 97.6 0.00061 2.1E-08 69.5 13.7 137 133-296 142-282 (412)
177 2fli_A Ribulose-phosphate 3-ep 97.6 0.00063 2.2E-08 62.8 12.0 142 124-304 61-206 (220)
178 1xi3_A Thiamine phosphate pyro 97.5 0.00013 4.5E-09 67.0 6.8 74 223-304 125-198 (215)
179 3vk5_A MOEO5; TIM barrel, tran 97.5 8.7E-05 3E-09 71.5 5.5 53 254-306 213-268 (286)
180 3vzx_A Heptaprenylglyceryl pho 97.5 0.00042 1.4E-08 65.1 9.8 75 218-307 145-219 (228)
181 3tji_A Mandelate racemase/muco 97.5 0.00068 2.3E-08 69.4 12.0 154 124-300 143-307 (422)
182 4a29_A Engineered retro-aldol 97.5 0.0024 8.4E-08 60.6 14.9 60 246-305 180-242 (258)
183 3inp_A D-ribulose-phosphate 3- 97.5 0.0014 4.6E-08 62.4 13.1 153 125-304 28-231 (246)
184 1sjd_A N-acylamino acid racema 97.5 0.001 3.6E-08 66.5 13.1 128 126-295 131-262 (368)
185 3b8i_A PA4872 oxaloacetate dec 97.4 0.0045 1.6E-07 60.0 16.5 197 76-300 25-238 (287)
186 1zlp_A PSR132, petal death pro 97.4 0.0041 1.4E-07 61.2 16.1 198 76-301 43-262 (318)
187 4gj1_A 1-(5-phosphoribosyl)-5- 97.4 0.00014 5E-09 68.9 5.6 79 219-307 37-115 (243)
188 3my9_A Muconate cycloisomerase 97.4 0.0033 1.1E-07 63.2 15.7 137 125-299 136-275 (377)
189 3tj4_A Mandelate racemase; eno 97.4 0.0037 1.3E-07 62.8 15.9 123 135-295 151-277 (372)
190 1chr_A Chloromuconate cycloiso 97.4 0.0026 8.7E-08 63.8 14.7 132 126-295 133-268 (370)
191 3o63_A Probable thiamine-phosp 97.4 0.00033 1.1E-08 66.5 7.7 76 223-305 152-228 (243)
192 1i4n_A Indole-3-glycerol phosp 97.4 0.0039 1.3E-07 59.3 15.1 138 123-305 100-239 (251)
193 3glc_A Aldolase LSRF; TIM barr 97.4 0.0024 8E-08 62.3 13.6 147 124-304 105-265 (295)
194 3q45_A Mandelate racemase/muco 97.3 0.003 1E-07 63.3 14.6 131 126-295 131-264 (368)
195 2tps_A Protein (thiamin phosph 97.3 0.00042 1.4E-08 64.2 7.6 76 223-304 133-208 (227)
196 3v3w_A Starvation sensing prot 97.3 0.0028 9.4E-08 64.9 14.4 148 124-297 138-308 (424)
197 1n7k_A Deoxyribose-phosphate a 97.3 0.0026 8.8E-08 60.0 12.7 136 135-301 86-228 (234)
198 1to3_A Putative aldolase YIHT; 97.3 0.0052 1.8E-07 60.1 15.3 136 142-302 113-260 (304)
199 3ddm_A Putative mandelate race 97.3 0.0013 4.4E-08 66.7 11.4 124 133-295 153-280 (392)
200 3gd6_A Muconate cycloisomerase 97.3 0.0034 1.1E-07 63.5 14.4 140 124-304 127-276 (391)
201 3ugv_A Enolase; enzyme functio 97.3 0.0049 1.7E-07 62.3 15.2 135 125-297 158-301 (390)
202 3toy_A Mandelate racemase/muco 97.2 0.0069 2.4E-07 61.1 16.1 134 124-295 156-293 (383)
203 3fv9_G Mandelate racemase/muco 97.2 0.012 4E-07 59.4 17.8 142 123-301 133-278 (386)
204 3i6e_A Muconate cycloisomerase 97.2 0.0081 2.8E-07 60.6 16.6 138 124-299 137-276 (385)
205 3vcn_A Mannonate dehydratase; 97.2 0.0027 9.1E-08 65.1 13.1 148 124-297 139-309 (425)
206 3dg3_A Muconate cycloisomerase 97.2 0.0054 1.8E-07 61.4 14.9 135 123-295 127-265 (367)
207 3tha_A Tryptophan synthase alp 97.2 0.00085 2.9E-08 63.9 8.2 167 124-301 13-232 (252)
208 1viz_A PCRB protein homolog; s 97.2 0.00039 1.3E-08 65.8 5.9 55 254-310 169-224 (240)
209 3go2_A Putative L-alanine-DL-g 97.2 0.004 1.4E-07 63.3 13.8 138 134-297 142-293 (409)
210 3t6c_A RSPA, putative MAND fam 97.2 0.013 4.3E-07 60.3 17.6 154 123-299 143-324 (440)
211 3mqt_A Mandelate racemase/muco 97.2 0.0051 1.8E-07 62.2 14.3 124 138-296 155-282 (394)
212 1r0m_A N-acylamino acid racema 97.2 0.0026 9E-08 63.8 12.0 128 126-295 138-268 (375)
213 4e4f_A Mannonate dehydratase; 97.1 0.0039 1.3E-07 63.9 13.4 147 123-295 137-308 (426)
214 2ze3_A DFA0005; organic waste 97.1 0.019 6.5E-07 55.3 17.3 190 76-300 20-236 (275)
215 1s2w_A Phosphoenolpyruvate pho 97.1 0.013 4.6E-07 56.9 16.2 200 76-301 23-243 (295)
216 4e38_A Keto-hydroxyglutarate-a 97.1 0.0054 1.9E-07 57.6 12.8 149 124-299 33-205 (232)
217 3r0u_A Enzyme of enolase super 97.1 0.014 4.8E-07 58.7 16.7 137 124-299 131-272 (379)
218 2czd_A Orotidine 5'-phosphate 97.1 0.0061 2.1E-07 56.0 12.8 124 140-304 68-193 (208)
219 2zc8_A N-acylamino acid racema 97.1 0.004 1.4E-07 62.2 12.3 128 126-295 131-261 (369)
220 3w01_A Heptaprenylglyceryl pho 97.1 0.00058 2E-08 64.3 5.7 51 255-306 174-224 (235)
221 1tqx_A D-ribulose-5-phosphate 97.0 0.009 3.1E-07 56.0 13.7 151 114-304 55-209 (227)
222 3mkc_A Racemase; metabolic pro 97.0 0.0069 2.4E-07 61.3 13.8 123 138-295 160-286 (394)
223 3tcs_A Racemase, putative; PSI 97.0 0.012 4E-07 59.5 15.0 134 135-299 146-283 (388)
224 1wbh_A KHG/KDPG aldolase; lyas 97.0 0.0072 2.5E-07 56.1 12.3 153 123-305 14-193 (214)
225 3lye_A Oxaloacetate acetyl hyd 97.0 0.011 3.7E-07 57.9 14.0 199 76-300 29-251 (307)
226 2a4a_A Deoxyribose-phosphate a 97.0 0.0026 8.8E-08 61.4 9.2 135 135-291 104-249 (281)
227 1vcv_A Probable deoxyribose-ph 96.9 0.0083 2.8E-07 56.2 12.4 137 136-291 66-211 (226)
228 3ceu_A Thiamine phosphate pyro 96.9 0.0014 4.7E-08 60.5 6.6 74 225-304 106-180 (210)
229 2hjp_A Phosphonopyruvate hydro 96.9 0.024 8.1E-07 55.0 15.4 197 76-300 19-239 (290)
230 1pii_A N-(5'phosphoribosyl)ant 96.9 0.014 4.8E-07 60.1 14.4 144 123-312 107-251 (452)
231 1p1x_A Deoxyribose-phosphate a 96.8 0.0041 1.4E-07 59.5 9.2 141 135-305 83-229 (260)
232 1vhc_A Putative KHG/KDPG aldol 96.8 0.0023 7.8E-08 59.9 7.3 67 223-305 127-194 (224)
233 3fa4_A 2,3-dimethylmalate lyas 96.8 0.018 6.1E-07 56.2 13.8 201 77-300 23-243 (302)
234 3ctl_A D-allulose-6-phosphate 96.8 0.0044 1.5E-07 58.3 9.2 144 123-304 56-204 (231)
235 3lab_A Putative KDPG (2-keto-3 96.7 0.0095 3.2E-07 55.3 11.0 155 123-305 11-195 (217)
236 3mwc_A Mandelate racemase/muco 96.7 0.0097 3.3E-07 60.3 12.0 135 125-301 150-290 (400)
237 1oy0_A Ketopantoate hydroxymet 96.7 0.021 7.3E-07 55.0 13.4 157 76-275 38-222 (281)
238 3jr2_A Hexulose-6-phosphate sy 96.7 0.0027 9.2E-08 58.8 6.8 139 125-303 60-201 (218)
239 3p3b_A Mandelate racemase/muco 96.7 0.012 3.9E-07 59.5 11.9 127 137-295 150-284 (392)
240 4e8g_A Enolase, mandelate race 96.6 0.036 1.2E-06 55.9 15.1 135 125-300 154-292 (391)
241 3dgb_A Muconate cycloisomerase 96.6 0.027 9.2E-07 56.6 14.1 136 126-299 139-278 (382)
242 1mxs_A KDPG aldolase; 2-keto-3 96.6 0.012 4.2E-07 54.9 10.6 67 223-305 136-203 (225)
243 4hnl_A Mandelate racemase/muco 96.5 0.044 1.5E-06 55.8 15.3 151 123-295 141-301 (421)
244 1jvn_A Glutamine, bifunctional 96.5 0.0042 1.4E-07 65.7 7.5 78 218-302 285-373 (555)
245 1jcn_A Inosine monophosphate d 96.5 0.0067 2.3E-07 63.5 9.0 63 222-297 263-325 (514)
246 1o66_A 3-methyl-2-oxobutanoate 96.5 0.084 2.9E-06 50.6 15.7 156 76-275 21-204 (275)
247 1qap_A Quinolinic acid phospho 96.4 0.022 7.5E-07 55.4 11.4 93 182-305 195-289 (296)
248 3fcp_A L-Ala-D/L-Glu epimerase 96.3 0.086 2.9E-06 52.9 15.6 139 125-301 137-279 (381)
249 4eiv_A Deoxyribose-phosphate a 96.3 0.055 1.9E-06 52.2 13.2 133 134-288 97-253 (297)
250 4a35_A Mitochondrial enolase s 96.2 0.11 3.9E-06 53.2 15.9 125 133-295 199-328 (441)
251 1q6o_A Humps, 3-keto-L-gulonat 96.2 0.036 1.2E-06 51.0 11.1 131 135-304 68-199 (216)
252 2b7n_A Probable nicotinate-nuc 96.1 0.017 5.8E-07 55.6 9.0 92 183-305 169-266 (273)
253 4adt_A Pyridoxine biosynthetic 96.1 0.013 4.3E-07 57.2 8.0 118 141-296 32-152 (297)
254 2qiw_A PEP phosphonomutase; st 96.1 0.092 3.1E-06 49.9 13.9 190 76-298 24-238 (255)
255 3kts_A Glycerol uptake operon 96.1 0.0028 9.7E-08 57.8 3.2 65 221-303 122-186 (192)
256 3cu2_A Ribulose-5-phosphate 3- 96.1 0.025 8.6E-07 53.2 9.7 137 128-302 73-223 (237)
257 3iv3_A Tagatose 1,6-diphosphat 96.0 0.067 2.3E-06 52.8 12.9 152 142-303 115-287 (332)
258 1m3u_A 3-methyl-2-oxobutanoate 96.0 0.087 3E-06 50.3 13.1 156 76-274 21-203 (264)
259 1vc4_A Indole-3-glycerol phosp 95.9 0.027 9.4E-07 53.5 9.4 72 219-304 71-142 (254)
260 3ik4_A Mandelate racemase/muco 95.9 0.22 7.4E-06 49.6 16.2 134 125-296 133-270 (365)
261 1oy0_A Ketopantoate hydroxymet 95.8 0.099 3.4E-06 50.3 12.8 120 124-271 33-153 (281)
262 1nsj_A PRAI, phosphoribosyl an 95.8 0.16 5.4E-06 46.6 13.5 178 77-304 7-188 (205)
263 3dip_A Enolase; structural gen 95.7 0.1 3.5E-06 52.9 13.1 127 141-295 162-294 (410)
264 2h6r_A Triosephosphate isomera 95.6 0.023 7.9E-07 52.7 7.4 131 144-305 76-208 (219)
265 1v5x_A PRA isomerase, phosphor 95.6 0.39 1.3E-05 43.9 15.5 174 76-304 5-182 (203)
266 4aaj_A N-(5'-phosphoribosyl)an 95.6 0.76 2.6E-05 42.8 17.7 179 76-300 25-206 (228)
267 3exr_A RMPD (hexulose-6-phosph 95.5 0.06 2.1E-06 50.0 9.8 143 124-304 58-204 (221)
268 2jbm_A Nicotinate-nucleotide p 95.5 0.03 1E-06 54.6 7.9 92 183-305 184-281 (299)
269 3tsm_A IGPS, indole-3-glycerol 95.5 0.025 8.5E-07 54.4 7.3 71 219-302 85-155 (272)
270 1o66_A 3-methyl-2-oxobutanoate 95.5 0.23 7.8E-06 47.6 13.8 120 124-272 16-136 (275)
271 3khj_A Inosine-5-monophosphate 95.5 0.063 2.1E-06 53.7 10.3 95 178-296 79-173 (361)
272 4fo4_A Inosine 5'-monophosphat 95.3 0.05 1.7E-06 54.5 9.0 98 178-296 80-177 (366)
273 3nvt_A 3-deoxy-D-arabino-heptu 95.3 1.1 3.7E-05 45.1 18.7 140 135-297 191-347 (385)
274 3qja_A IGPS, indole-3-glycerol 95.2 0.025 8.5E-07 54.4 6.3 74 218-304 77-150 (272)
275 2agk_A 1-(5-phosphoribosyl)-5- 95.2 0.0081 2.8E-07 57.4 2.8 71 219-307 44-119 (260)
276 1x1o_A Nicotinate-nucleotide p 95.2 0.09 3.1E-06 50.8 10.1 92 183-305 183-277 (286)
277 3ve9_A Orotidine-5'-phosphate 95.1 0.059 2E-06 49.9 8.2 136 124-304 50-188 (215)
278 3ru6_A Orotidine 5'-phosphate 95.0 0.11 3.7E-06 50.6 10.0 144 124-305 76-239 (303)
279 1vkf_A Glycerol uptake operon 95.0 0.028 9.6E-07 50.9 5.4 43 260-303 142-184 (188)
280 3m47_A Orotidine 5'-phosphate 95.0 0.21 7.1E-06 46.5 11.6 191 68-304 12-210 (228)
281 4dxk_A Mandelate racemase / mu 94.9 0.16 5.5E-06 51.3 11.4 130 141-295 158-290 (400)
282 1m3u_A 3-methyl-2-oxobutanoate 94.8 0.52 1.8E-05 44.9 14.2 143 124-295 16-180 (264)
283 3nl6_A Thiamine biosynthetic b 94.8 0.052 1.8E-06 57.2 7.8 78 223-305 125-218 (540)
284 3r2g_A Inosine 5'-monophosphat 94.7 0.039 1.4E-06 55.1 6.4 63 221-296 107-169 (361)
285 3o1n_A 3-dehydroquinate dehydr 94.7 1.6 5.4E-05 41.8 17.4 142 124-296 39-196 (276)
286 3vav_A 3-methyl-2-oxobutanoate 94.7 0.68 2.3E-05 44.3 14.5 127 116-273 20-148 (275)
287 4dye_A Isomerase; enolase fami 94.4 0.51 1.7E-05 47.6 13.9 124 136-300 169-295 (398)
288 2v9d_A YAGE; dihydrodipicolini 94.4 1.8 6.3E-05 42.6 17.5 196 71-308 38-250 (343)
289 4h3d_A 3-dehydroquinate dehydr 94.4 3.2 0.00011 39.2 18.5 99 123-233 17-120 (258)
290 1wuf_A Hypothetical protein LI 94.3 0.21 7.2E-06 50.2 10.6 128 126-295 151-281 (393)
291 3ih1_A Methylisocitrate lyase; 94.2 1.1 3.8E-05 43.5 15.2 153 121-295 25-194 (305)
292 3c2e_A Nicotinate-nucleotide p 94.2 0.03 1E-06 54.5 4.0 39 266-305 248-286 (294)
293 3vav_A 3-methyl-2-oxobutanoate 94.1 0.81 2.8E-05 43.8 13.6 156 76-274 33-215 (275)
294 2yyu_A Orotidine 5'-phosphate 94.1 0.16 5.5E-06 47.8 8.7 142 125-304 56-223 (246)
295 1f6k_A N-acetylneuraminate lya 94.1 4.4 0.00015 38.8 19.1 145 122-308 71-218 (293)
296 1zfj_A Inosine monophosphate d 94.0 0.039 1.3E-06 57.2 4.6 65 220-297 239-303 (491)
297 2yci_X 5-methyltetrahydrofolat 94.0 0.45 1.5E-05 45.5 11.6 53 135-200 32-84 (271)
298 4dbe_A Orotidine 5'-phosphate 93.9 0.37 1.3E-05 44.7 10.6 140 124-304 52-195 (222)
299 2pge_A MENC; OSBS, NYSGXRC, PS 93.9 0.73 2.5E-05 45.9 13.6 133 125-295 152-290 (377)
300 3paj_A Nicotinate-nucleotide p 93.8 0.33 1.1E-05 47.5 10.6 91 184-305 220-312 (320)
301 1eix_A Orotidine 5'-monophosph 93.7 0.082 2.8E-06 49.8 5.9 141 125-304 66-229 (245)
302 3lab_A Putative KDPG (2-keto-3 93.7 0.26 8.8E-06 45.7 9.0 79 195-295 13-91 (217)
303 3flu_A DHDPS, dihydrodipicolin 93.6 5.4 0.00018 38.3 21.5 191 79-311 25-225 (297)
304 1dbt_A Orotidine 5'-phosphate 93.5 0.8 2.7E-05 42.6 12.4 142 125-304 55-222 (239)
305 2wkj_A N-acetylneuraminate lya 93.4 5.8 0.0002 38.2 19.2 195 72-308 19-226 (303)
306 1ypf_A GMP reductase; GUAC, pu 93.4 0.28 9.6E-06 48.3 9.5 93 181-295 82-176 (336)
307 3si9_A DHDPS, dihydrodipicolin 93.4 6.1 0.00021 38.3 22.3 197 72-311 30-241 (315)
308 1qpo_A Quinolinate acid phosph 93.4 0.19 6.4E-06 48.5 7.9 96 183-305 182-278 (284)
309 4avf_A Inosine-5'-monophosphat 93.3 0.089 3E-06 54.7 5.8 62 222-296 237-298 (490)
310 1o4u_A Type II quinolic acid p 93.2 0.087 3E-06 50.9 5.3 96 182-305 179-277 (285)
311 4af0_A Inosine-5'-monophosphat 93.2 0.1 3.5E-06 54.5 6.1 65 221-298 288-352 (556)
312 3tr2_A Orotidine 5'-phosphate 93.2 2.1 7.1E-05 40.1 14.6 189 69-304 9-224 (239)
313 1vqt_A Orotidine 5'-phosphate 93.2 0.51 1.7E-05 43.4 10.2 133 124-304 58-200 (213)
314 3u9i_A Mandelate racemase/muco 93.1 0.56 1.9E-05 47.2 11.3 140 126-295 156-299 (393)
315 3tfx_A Orotidine 5'-phosphate 93.1 1.6 5.3E-05 41.5 13.6 191 68-304 4-224 (259)
316 2wqp_A Polysialic acid capsule 93.1 1.6 5.5E-05 43.2 14.2 199 60-291 7-231 (349)
317 4fxs_A Inosine-5'-monophosphat 92.9 0.093 3.2E-06 54.6 5.2 61 223-296 240-300 (496)
318 3tqv_A Nicotinate-nucleotide p 92.9 0.38 1.3E-05 46.4 9.1 92 183-305 186-279 (287)
319 3daq_A DHDPS, dihydrodipicolin 92.8 6.9 0.00024 37.4 18.2 148 122-311 69-221 (292)
320 3tak_A DHDPS, dihydrodipicolin 92.8 6.9 0.00024 37.4 19.4 188 79-308 19-216 (291)
321 4h1z_A Enolase Q92ZS5; dehydra 92.8 2.6 8.8E-05 42.5 15.7 123 133-294 186-311 (412)
322 3na8_A Putative dihydrodipicol 92.5 8.1 0.00028 37.4 21.8 148 122-311 91-243 (315)
323 3eoo_A Methylisocitrate lyase; 92.4 2.9 9.8E-05 40.4 14.8 157 123-295 20-190 (298)
324 3igs_A N-acetylmannosamine-6-p 92.3 0.59 2E-05 43.5 9.6 102 181-306 6-118 (232)
325 1vli_A Spore coat polysacchari 92.3 1.4 4.7E-05 44.2 12.6 200 60-291 16-243 (385)
326 3fok_A Uncharacterized protein 92.2 0.36 1.2E-05 46.8 8.1 123 144-301 135-278 (307)
327 3s5s_A Mandelate racemase/muco 92.0 1 3.4E-05 45.2 11.4 132 126-295 135-270 (389)
328 1vs1_A 3-deoxy-7-phosphoheptul 91.9 1.5 5.3E-05 41.9 12.1 137 136-297 88-243 (276)
329 2ze3_A DFA0005; organic waste 91.8 2.1 7.1E-05 40.9 12.9 88 141-236 27-115 (275)
330 1y0e_A Putative N-acetylmannos 91.7 0.76 2.6E-05 41.8 9.5 131 126-297 8-147 (223)
331 3bo9_A Putative nitroalkan dio 91.7 1.4 4.7E-05 43.1 11.8 90 178-295 61-150 (326)
332 3usb_A Inosine-5'-monophosphat 91.7 0.3 1E-05 50.9 7.4 62 222-296 264-325 (511)
333 2chr_A Chloromuconate cycloiso 91.7 4.6 0.00016 39.7 15.8 130 127-294 134-267 (370)
334 3cpr_A Dihydrodipicolinate syn 91.7 9.9 0.00034 36.5 21.0 194 72-308 24-229 (304)
335 3g8r_A Probable spore coat pol 91.6 3.2 0.00011 41.1 14.3 129 136-291 77-220 (350)
336 1xg4_A Probable methylisocitra 91.6 3.9 0.00013 39.4 14.7 160 123-296 15-187 (295)
337 4e38_A Keto-hydroxyglutarate-a 91.5 1.3 4.4E-05 41.4 10.8 79 196-296 35-113 (232)
338 1o60_A 2-dehydro-3-deoxyphosph 91.3 1 3.5E-05 43.5 10.2 139 136-297 75-240 (292)
339 3gnn_A Nicotinate-nucleotide p 91.3 0.79 2.7E-05 44.4 9.3 92 183-305 197-290 (298)
340 3ldv_A Orotidine 5'-phosphate 91.1 2 6.9E-05 40.6 11.9 190 68-304 27-242 (255)
341 3m5v_A DHDPS, dihydrodipicolin 91.1 11 0.00038 36.1 18.5 146 124-311 77-226 (301)
342 1vr6_A Phospho-2-dehydro-3-deo 91.1 1.3 4.5E-05 43.9 10.9 138 136-297 156-311 (350)
343 1vrd_A Inosine-5'-monophosphat 91.0 0.22 7.5E-06 51.6 5.5 63 221-296 244-306 (494)
344 2rfg_A Dihydrodipicolinate syn 90.9 12 0.0004 35.9 22.5 148 122-311 67-218 (297)
345 1hg3_A Triosephosphate isomera 90.8 1.1 3.8E-05 41.6 9.6 80 223-305 134-214 (225)
346 2gjl_A Hypothetical protein PA 90.8 1.3 4.5E-05 43.0 10.6 96 177-297 50-147 (328)
347 1p0k_A Isopentenyl-diphosphate 90.8 1 3.6E-05 44.2 10.0 94 192-296 114-209 (349)
348 1sfl_A 3-dehydroquinate dehydr 90.6 11 0.00037 35.0 16.8 95 126-233 5-104 (238)
349 1twd_A Copper homeostasis prot 90.6 5 0.00017 37.8 13.9 127 142-295 13-147 (256)
350 1zlp_A PSR132, petal death pro 90.5 6.4 0.00022 38.4 15.0 159 123-296 37-209 (318)
351 2vc6_A MOSA, dihydrodipicolina 90.4 4 0.00014 39.1 13.5 126 135-287 19-152 (292)
352 3b8i_A PA4872 oxaloacetate dec 90.4 3.3 0.00011 39.8 12.7 159 123-296 19-188 (287)
353 4hpn_A Putative uncharacterize 90.3 5.7 0.00019 39.2 15.0 119 137-294 146-267 (378)
354 3iwp_A Copper homeostasis prot 90.3 3.3 0.00011 39.8 12.5 140 126-296 39-186 (287)
355 1f6k_A N-acetylneuraminate lya 90.3 0.4 1.4E-05 46.2 6.3 86 211-304 23-114 (293)
356 3ffs_A Inosine-5-monophosphate 90.2 0.63 2.1E-05 47.0 7.8 61 222-296 152-212 (400)
357 1zco_A 2-dehydro-3-deoxyphosph 90.2 1.6 5.4E-05 41.4 10.3 138 136-297 73-228 (262)
358 2bdq_A Copper homeostasis prot 90.1 5 0.00017 37.1 13.2 129 137-295 76-206 (224)
359 3l0g_A Nicotinate-nucleotide p 89.9 0.8 2.8E-05 44.3 8.0 92 183-305 195-288 (300)
360 1yxy_A Putative N-acetylmannos 89.9 1.3 4.5E-05 40.6 9.3 132 122-293 15-157 (234)
361 3l21_A DHDPS, dihydrodipicolin 89.8 14 0.00049 35.4 20.9 197 72-311 23-231 (304)
362 2hjp_A Phosphonopyruvate hydro 89.8 10 0.00035 36.3 15.8 158 124-295 14-185 (290)
363 2ozt_A TLR1174 protein; struct 89.8 7.2 0.00025 37.9 15.1 124 134-295 115-244 (332)
364 2c6q_A GMP reductase 2; TIM ba 89.6 0.59 2E-05 46.3 7.0 59 225-296 131-189 (351)
365 3cpr_A Dihydrodipicolinate syn 89.5 0.58 2E-05 45.3 6.8 86 211-304 36-126 (304)
366 1s2w_A Phosphoenolpyruvate pho 89.5 7 0.00024 37.6 14.4 159 123-295 17-189 (295)
367 3dz1_A Dihydrodipicolinate syn 89.4 1.1 3.6E-05 43.7 8.5 81 211-299 28-112 (313)
368 3b4u_A Dihydrodipicolinate syn 89.4 15 0.00052 35.0 20.8 145 121-306 69-221 (294)
369 1twd_A Copper homeostasis prot 89.3 6 0.0002 37.3 13.3 139 124-296 51-198 (256)
370 3l21_A DHDPS, dihydrodipicolin 89.3 0.54 1.9E-05 45.6 6.4 86 211-304 35-125 (304)
371 1xky_A Dihydrodipicolinate syn 89.1 0.53 1.8E-05 45.6 6.2 86 211-304 32-122 (301)
372 3bw2_A 2-nitropropane dioxygen 89.1 3.2 0.00011 41.0 12.0 100 177-297 45-174 (369)
373 3q58_A N-acetylmannosamine-6-p 89.1 3.8 0.00013 37.9 11.8 118 134-295 33-155 (229)
374 2r8w_A AGR_C_1641P; APC7498, d 89.0 18 0.0006 35.3 25.1 152 122-311 101-256 (332)
375 3cyj_A Mandelate racemase/muco 89.0 9.6 0.00033 37.5 15.5 122 135-295 144-269 (372)
376 2wkj_A N-acetylneuraminate lya 89.0 0.58 2E-05 45.3 6.3 86 211-304 31-121 (303)
377 3flu_A DHDPS, dihydrodipicolin 88.8 0.57 1.9E-05 45.3 6.1 86 211-304 27-117 (297)
378 2qkf_A 3-deoxy-D-manno-octulos 88.8 1.4 4.9E-05 42.2 8.9 141 136-299 72-239 (280)
379 3qld_A Mandelate racemase/muco 88.8 11 0.00038 37.4 15.9 130 125-296 138-270 (388)
380 3m5v_A DHDPS, dihydrodipicolin 88.7 0.57 2E-05 45.3 6.1 86 211-304 27-118 (301)
381 2ehh_A DHDPS, dihydrodipicolin 88.7 0.66 2.2E-05 44.7 6.5 86 211-304 20-110 (294)
382 2yxg_A DHDPS, dihydrodipicolin 88.7 0.63 2.2E-05 44.7 6.3 86 211-304 20-110 (289)
383 3a5f_A Dihydrodipicolinate syn 88.6 0.6 2E-05 44.9 6.1 86 211-304 21-111 (291)
384 3daq_A DHDPS, dihydrodipicolin 88.6 0.57 2E-05 45.1 5.9 86 211-304 22-112 (292)
385 3qze_A DHDPS, dihydrodipicolin 88.4 0.5 1.7E-05 46.1 5.4 86 211-304 43-133 (314)
386 3b4u_A Dihydrodipicolinate syn 88.3 0.66 2.2E-05 44.7 6.2 86 211-304 23-114 (294)
387 1xky_A Dihydrodipicolinate syn 88.2 19 0.00064 34.5 26.5 188 79-308 30-227 (301)
388 1o5k_A DHDPS, dihydrodipicolin 88.2 0.64 2.2E-05 45.1 6.0 86 211-304 32-122 (306)
389 3s5o_A 4-hydroxy-2-oxoglutarat 88.1 1.5 5.1E-05 42.5 8.6 78 210-295 33-115 (307)
390 1gox_A (S)-2-hydroxy-acid oxid 88.0 3.1 0.00011 41.3 11.1 41 254-296 213-253 (370)
391 3iwp_A Copper homeostasis prot 88.0 8.4 0.00029 36.9 13.5 125 137-295 111-237 (287)
392 3f4w_A Putative hexulose 6 pho 88.0 5.2 0.00018 35.8 11.7 125 129-296 5-134 (211)
393 3sz8_A 2-dehydro-3-deoxyphosph 88.0 2.6 8.8E-05 40.5 10.0 110 171-297 116-242 (285)
394 2rfg_A Dihydrodipicolinate syn 87.9 0.57 2E-05 45.2 5.5 86 211-304 20-110 (297)
395 1qwg_A PSL synthase;, (2R)-pho 87.7 7 0.00024 36.7 12.5 82 138-237 86-172 (251)
396 3si9_A DHDPS, dihydrodipicolin 87.7 0.55 1.9E-05 45.8 5.2 86 211-304 42-132 (315)
397 2ojp_A DHDPS, dihydrodipicolin 87.7 0.6 2E-05 45.0 5.4 86 211-304 21-111 (292)
398 1wue_A Mandelate racemase/muco 87.6 9.6 0.00033 37.8 14.5 128 126-295 151-281 (386)
399 2ojp_A DHDPS, dihydrodipicolin 87.6 20 0.00068 34.1 22.5 191 79-311 19-219 (292)
400 1w0m_A TIM, triosephosphate is 87.5 0.92 3.2E-05 42.2 6.4 75 224-305 132-211 (226)
401 1eep_A Inosine 5'-monophosphat 87.5 0.56 1.9E-05 47.2 5.3 62 222-296 161-222 (404)
402 3qw3_A Orotidine-5-phosphate d 87.5 5.7 0.00019 37.4 12.0 141 123-304 75-236 (255)
403 2z6i_A Trans-2-enoyl-ACP reduc 87.5 3.9 0.00013 39.8 11.3 92 178-297 47-139 (332)
404 3na8_A Putative dihydrodipicol 87.4 0.67 2.3E-05 45.2 5.6 86 211-304 44-134 (315)
405 2v9d_A YAGE; dihydrodipicolini 87.4 0.65 2.2E-05 45.9 5.6 86 211-304 51-141 (343)
406 3tak_A DHDPS, dihydrodipicolin 87.4 0.6 2.1E-05 44.9 5.2 86 211-304 21-111 (291)
407 2r8w_A AGR_C_1641P; APC7498, d 87.2 0.72 2.5E-05 45.3 5.7 86 211-304 54-144 (332)
408 3qfe_A Putative dihydrodipicol 86.9 23 0.00078 34.2 17.2 195 79-311 29-234 (318)
409 2vc6_A MOSA, dihydrodipicolina 86.9 21 0.00073 33.9 24.2 148 122-311 67-219 (292)
410 4dpp_A DHDPS 2, dihydrodipicol 86.7 1 3.4E-05 44.9 6.5 86 211-304 79-169 (360)
411 3h5d_A DHDPS, dihydrodipicolin 86.6 24 0.00081 34.0 24.0 189 79-310 25-224 (311)
412 4h83_A Mandelate racemase/muco 86.5 7.1 0.00024 38.8 12.8 123 134-294 163-289 (388)
413 3fkr_A L-2-keto-3-deoxyarabona 86.5 0.84 2.9E-05 44.4 5.7 82 211-300 28-114 (309)
414 3fs2_A 2-dehydro-3-deoxyphosph 86.3 2.8 9.6E-05 40.5 9.2 108 171-297 137-261 (298)
415 3e96_A Dihydrodipicolinate syn 86.2 0.56 1.9E-05 45.7 4.4 85 211-304 32-121 (316)
416 1h1y_A D-ribulose-5-phosphate 86.2 2.8 9.5E-05 38.5 8.9 134 125-297 7-146 (228)
417 2r91_A 2-keto-3-deoxy-(6-phosp 86.1 1.1 3.7E-05 43.0 6.3 85 211-304 18-106 (286)
418 3d0c_A Dihydrodipicolinate syn 86.1 0.63 2.1E-05 45.4 4.6 85 211-304 32-121 (314)
419 2qiw_A PEP phosphonomutase; st 86.0 10 0.00035 35.6 12.9 101 120-236 15-116 (255)
420 3fkr_A L-2-keto-3-deoxyarabona 85.8 9.1 0.00031 36.9 12.8 120 72-201 16-144 (309)
421 1wa3_A 2-keto-3-deoxy-6-phosph 85.8 2.1 7.1E-05 38.3 7.7 81 195-298 10-91 (205)
422 2bdq_A Copper homeostasis prot 85.8 4.9 0.00017 37.2 10.2 128 143-294 14-151 (224)
423 3qze_A DHDPS, dihydrodipicolin 85.7 26 0.0009 33.7 26.4 191 79-311 41-241 (314)
424 1w3i_A EDA, 2-keto-3-deoxy glu 85.6 1.2 4E-05 42.9 6.2 85 211-304 19-107 (293)
425 3qfe_A Putative dihydrodipicol 85.6 1.7 5.8E-05 42.4 7.4 83 211-301 31-118 (318)
426 1u83_A Phosphosulfolactate syn 85.5 2.8 9.7E-05 39.9 8.6 80 139-237 112-196 (276)
427 2ftp_A Hydroxymethylglutaryl-C 85.5 21 0.00073 34.0 15.2 158 130-305 80-245 (302)
428 2nuw_A 2-keto-3-deoxygluconate 85.0 1.2 4E-05 42.8 5.9 85 211-304 19-107 (288)
429 1vli_A Spore coat polysacchari 84.9 17 0.00056 36.4 14.3 139 127-295 31-190 (385)
430 3ijl_A Muconate cycloisomerase 84.3 5.2 0.00018 39.0 10.4 123 130-294 129-251 (338)
431 1nsj_A PRAI, phosphoribosyl an 84.0 5.3 0.00018 36.3 9.6 122 128-295 3-125 (205)
432 2v82_A 2-dehydro-3-deoxy-6-pho 83.8 4.4 0.00015 36.3 9.0 82 194-297 6-88 (212)
433 3hgj_A Chromate reductase; TIM 83.7 5.8 0.0002 39.0 10.4 98 121-236 216-320 (349)
434 3h5d_A DHDPS, dihydrodipicolin 83.4 1.3 4.6E-05 42.9 5.6 77 221-304 36-118 (311)
435 1mxs_A KDPG aldolase; 2-keto-3 83.3 7.8 0.00027 35.7 10.6 90 182-296 16-105 (225)
436 1vhc_A Putative KHG/KDPG aldol 83.2 9.6 0.00033 35.0 11.1 80 196-297 18-97 (224)
437 3dz1_A Dihydrodipicolinate syn 83.0 10 0.00035 36.6 11.8 120 72-206 16-149 (313)
438 3fa4_A 2,3-dimethylmalate lyas 82.9 5 0.00017 38.8 9.4 81 141-236 29-118 (302)
439 3sr7_A Isopentenyl-diphosphate 82.7 1.2 4.2E-05 44.3 5.1 72 219-295 161-236 (365)
440 2a4a_A Deoxyribose-phosphate a 82.7 4.5 0.00016 38.7 8.8 86 134-231 169-257 (281)
441 3va8_A Probable dehydratase; e 82.6 15 0.0005 37.4 13.2 121 134-295 190-313 (445)
442 3p6l_A Sugar phosphate isomera 82.5 4.4 0.00015 37.2 8.7 137 124-287 9-153 (262)
443 4a29_A Engineered retro-aldol 82.4 4.7 0.00016 38.0 8.7 70 219-302 70-139 (258)
444 3eb2_A Putative dihydrodipicol 81.9 0.5 1.7E-05 45.7 1.9 86 211-304 24-114 (300)
445 2hmc_A AGR_L_411P, dihydrodipi 81.8 41 0.0014 32.9 20.6 193 79-311 44-246 (344)
446 3p0w_A Mandelate racemase/muco 81.7 10 0.00035 38.8 11.8 123 134-295 199-328 (470)
447 3vdg_A Probable glucarate dehy 81.6 18 0.0006 36.8 13.4 121 134-295 192-315 (445)
448 2zbt_A Pyridoxal biosynthesis 81.5 2 6.7E-05 41.1 5.9 70 219-297 34-107 (297)
449 1zco_A 2-dehydro-3-deoxyphosph 81.3 32 0.0011 32.2 14.3 136 126-298 24-167 (262)
450 3q94_A Fructose-bisphosphate a 81.2 35 0.0012 32.6 14.5 112 177-300 118-240 (288)
451 1p4c_A L(+)-mandelate dehydrog 80.8 1.8 6.1E-05 43.3 5.5 43 252-296 211-253 (380)
452 1wv2_A Thiazole moeity, thiazo 80.6 11 0.00038 35.6 10.5 130 76-233 80-216 (265)
453 3mzn_A Glucarate dehydratase; 80.4 14 0.00047 37.6 12.1 123 134-295 181-310 (450)
454 3d0c_A Dihydrodipicolinate syn 80.3 43 0.0015 32.2 22.1 146 122-311 79-228 (314)
455 2fli_A Ribulose-phosphate 3-ep 80.2 9.4 0.00032 34.2 9.8 129 127-295 6-137 (220)
456 1kbi_A Cytochrome B2, L-LCR; f 80.2 4.2 0.00014 42.3 8.2 41 253-295 330-370 (511)
457 3lye_A Oxaloacetate acetyl hyd 80.1 15 0.00051 35.5 11.6 81 141-236 36-126 (307)
458 3n9r_A Fructose-bisphosphate a 80.0 29 0.00098 33.6 13.5 139 124-290 74-228 (307)
459 2yr1_A 3-dehydroquinate dehydr 79.9 30 0.001 32.3 13.5 96 125-233 20-121 (257)
460 2hmc_A AGR_L_411P, dihydrodipi 79.9 2.5 8.4E-05 41.7 6.1 84 211-304 46-134 (344)
461 3e96_A Dihydrodipicolinate syn 79.9 44 0.0015 32.1 18.4 148 122-311 79-228 (316)
462 3eb2_A Putative dihydrodipicol 79.8 43 0.0015 31.9 23.0 150 122-311 71-222 (300)
463 2nuw_A 2-keto-3-deoxygluconate 79.6 17 0.00058 34.5 11.8 123 135-285 18-147 (288)
464 1f8m_A Isocitrate lyase, ICL; 79.6 17 0.00059 36.8 12.2 157 124-301 148-353 (429)
465 1w3i_A EDA, 2-keto-3-deoxy glu 79.6 18 0.00061 34.5 12.0 122 135-284 18-146 (293)
466 2r91_A 2-keto-3-deoxy-(6-phosp 79.5 16 0.00056 34.6 11.7 122 135-284 17-145 (286)
467 1wbh_A KHG/KDPG aldolase; lyas 79.5 10 0.00035 34.5 9.8 80 195-296 16-95 (214)
468 1f6y_A 5-methyltetrahydrofolat 79.4 2.9 9.9E-05 39.6 6.2 53 135-200 23-75 (262)
469 4h2h_A Mandelate racemase/muco 79.0 51 0.0017 32.3 16.1 131 124-295 139-273 (376)
470 3tml_A 2-dehydro-3-deoxyphosph 78.7 8.4 0.00029 37.0 9.2 108 171-297 113-243 (288)
471 2ekc_A AQ_1548, tryptophan syn 78.3 8.2 0.00028 36.2 9.0 42 255-296 82-129 (262)
472 3vkj_A Isopentenyl-diphosphate 78.3 5.9 0.0002 39.4 8.3 40 255-295 176-217 (368)
473 3nwr_A A rubisco-like protein; 78.2 34 0.0012 34.7 13.9 199 75-304 170-389 (432)
474 2q02_A Putative cytoplasmic pr 78.1 13 0.00044 34.0 10.2 145 126-289 8-162 (272)
475 1mzh_A Deoxyribose-phosphate a 77.7 5.9 0.0002 36.4 7.6 83 126-232 117-203 (225)
476 2nli_A Lactate oxidase; flavoe 77.6 6.1 0.00021 39.2 8.2 41 253-295 216-256 (368)
477 2nv1_A Pyridoxal biosynthesis 77.6 5 0.00017 38.5 7.4 73 219-300 34-110 (305)
478 3gr7_A NADPH dehydrogenase; fl 77.1 8.4 0.00029 37.7 9.0 91 124-232 209-306 (340)
479 1ydn_A Hydroxymethylglutaryl-C 77.0 34 0.0012 32.3 13.2 212 72-305 16-241 (295)
480 3tr9_A Dihydropteroate synthas 76.9 3.5 0.00012 40.2 6.0 66 134-200 46-111 (314)
481 3ndo_A Deoxyribose-phosphate a 76.9 6.7 0.00023 36.4 7.7 76 135-233 144-219 (231)
482 3a5f_A Dihydrodipicolinate syn 76.9 51 0.0017 31.2 22.2 194 73-308 11-216 (291)
483 3vc5_A Mandelate racemase/muco 76.8 31 0.001 34.9 13.4 121 134-295 187-310 (441)
484 3jr2_A Hexulose-6-phosphate sy 76.8 18 0.0006 32.7 10.6 128 126-296 8-139 (218)
485 1bwv_A Rubisco, protein (ribul 76.8 39 0.0013 34.8 14.0 204 70-306 177-421 (493)
486 2ehh_A DHDPS, dihydrodipicolin 76.7 52 0.0018 31.1 24.3 148 122-311 67-219 (294)
487 2yxg_A DHDPS, dihydrodipicolin 76.6 52 0.0018 31.1 24.5 147 122-311 67-217 (289)
488 1me8_A Inosine-5'-monophosphat 76.6 1.3 4.6E-05 45.9 3.2 62 223-297 251-313 (503)
489 3ctl_A D-allulose-6-phosphate 76.5 6.3 0.00022 36.4 7.5 83 127-235 3-89 (231)
490 3qfw_A Ribulose-1,5-bisphospha 76.4 22 0.00074 35.4 11.7 145 123-297 129-285 (378)
491 1vr6_A Phospho-2-dehydro-3-deo 76.3 60 0.0021 31.8 14.9 128 135-299 118-251 (350)
492 1f76_A Dihydroorotate dehydrog 76.2 12 0.00043 36.1 9.9 99 124-232 211-317 (336)
493 3tqp_A Enolase; energy metabol 76.0 17 0.00059 36.7 11.2 102 177-295 216-336 (428)
494 1rvg_A Fructose-1,6-bisphospha 76.0 58 0.002 31.3 15.8 105 177-291 110-227 (305)
495 2isw_A Putative fructose-1,6-b 75.9 32 0.0011 33.5 12.6 102 177-290 113-228 (323)
496 1ep3_A Dihydroorotate dehydrog 75.4 13 0.00043 35.3 9.6 104 183-295 86-195 (311)
497 1q7z_A 5-methyltetrahydrofolat 75.3 22 0.00076 37.2 12.2 135 75-230 115-269 (566)
498 3m6y_A 4-hydroxy-2-oxoglutarat 75.2 2.4 8.3E-05 39.6 4.1 174 127-342 90-274 (275)
499 1nvm_A HOA, 4-hydroxy-2-oxoval 75.0 11 0.00039 36.7 9.3 82 211-296 29-113 (345)
500 3oa3_A Aldolase; structural ge 74.7 6.1 0.00021 37.9 7.0 78 135-233 186-263 (288)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=5.5e-57 Score=455.57 Aligned_cols=313 Identities=35% Similarity=0.629 Sum_probs=264.8
Q ss_pred cCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHH
Q 013784 67 LPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELA 146 (436)
Q Consensus 67 l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~ 146 (436)
|+|||++|||+|+||.+||++++++||+|+++|||++++.+.++.. ++++++++++.|+++||+|++|++|+++|+++
T Consensus 2 l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~--~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a 79 (350)
T 3b0p_A 2 LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNR--ERLLAFRPEEHPIALQLAGSDPKSLAEAARIG 79 (350)
T ss_dssp CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCH--HHHHCCCGGGCSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCH--HHHhccCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999998876554 46677888999999999999999999999999
Q ss_pred HHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCC
Q 013784 147 NAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP 226 (436)
Q Consensus 147 ~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~G 226 (436)
+++|||+||||+|||..++ ++++||++|+++++++.++++++++.+++||++|+|+||++..+.++..++ ++.++++|
T Consensus 80 ~~~G~D~IeIn~gcP~~~~-~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~-a~~l~~aG 157 (350)
T 3b0p_A 80 EAFGYDEINLNLGCPSEKA-QEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQS-VEAMAEAG 157 (350)
T ss_dssp HHTTCSEEEEEECCCSHHH-HHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHH-HHHHHHTT
T ss_pred HHcCCCEEEECCcCCCCcC-cCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHH-HHHHHHcC
Confidence 9999999999999999754 467899999999999999999999988999999999999887666555554 56678899
Q ss_pred ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 227 TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 227 vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
+|+|+||+|+..+ |.++..++.+++..|+++.++++.++++|||+||||.|++++.++++ |||+||+||+++.|||+|
T Consensus 158 ~d~I~V~~r~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~ 235 (350)
T 3b0p_A 158 VKVFVVHARSALL-ALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVL 235 (350)
T ss_dssp CCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGG
T ss_pred CCEEEEecCchhc-ccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHH
Confidence 9999999998743 44433334456667999999988766899999999999999999998 999999999999999996
Q ss_pred hhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhhhhHHHH
Q 013784 307 LGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKTVKSF 386 (436)
Q Consensus 307 ~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~k~~~~y~~~~~g~~~~r~~l~~~~~~~~~~~~~ 386 (436)
.++....++ +.+..++.++++.|++|++.+++ +|+ .++.++||+.||++++|++++||+.+++. .+.+.+.++
T Consensus 236 -~~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~~~~~kh~~~~~~g~~~~~~~r~~l~~~-~~~~~~~~~ 308 (350)
T 3b0p_A 236 -EEADRRVFG-LPRRPSRLEVARRMRAYLEEEVL-KGT---PPWAVLRHMLNLFRGRPKGRLWRRLLSEG-RSLQALDRA 308 (350)
T ss_dssp -TTHHHHTTC-CSCCCCHHHHHHHHHHHHHHHHH-HTC---CHHHHHTTSTTTTTTSTTHHHHHHHHHHH-CSHHHHHHH
T ss_pred -HHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHH-cCc---cHHHHHHHHHHHHccCCCHHHHHHHHHCC-CCHHHHHHH
Confidence 555555556 44456889999999999988877 565 47899999999999999999999999655 666667776
Q ss_pred HHHHHH
Q 013784 387 LEETIV 392 (436)
Q Consensus 387 l~~~~~ 392 (436)
++++..
T Consensus 309 l~~~~~ 314 (350)
T 3b0p_A 309 LRLMEE 314 (350)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 766443
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.3e-52 Score=418.50 Aligned_cols=307 Identities=22% Similarity=0.360 Sum_probs=250.5
Q ss_pred eecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHH
Q 013784 65 QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATE 144 (436)
Q Consensus 65 l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~ 144 (436)
+.++|||++|||+++||.+||.++++.| +|+++|||++++.+.+..+...+.+ .++.+.|+++||+|++|++|+++|+
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G-~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~ 78 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWG-ADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAAR 78 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTT-CCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHH
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHC-cCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHH
Confidence 3589999999999999999999999886 6999999999998876655444555 7888999999999999999999999
Q ss_pred HHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhc
Q 013784 145 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL 224 (436)
Q Consensus 145 ~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~ 224 (436)
+++++ ||+||||+|||..+ .++++||++|+++++++.++++++++.+++||++|+|.||+..+.. ++ ++.+++
T Consensus 79 ~a~~~-~d~Iein~gcP~~~-~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~-~~----a~~l~~ 151 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAGCPVRK-VVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE-EI----YRILVE 151 (318)
T ss_dssp HHTTT-CSEEEEEECCCCHH-HHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH-HH----HHHHHH
T ss_pred HHHHh-CCEEEEECCCCcHh-cCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH-HH----HHHHHH
Confidence 99999 99999999999965 4567899999999999999999999999999999999999875433 33 456678
Q ss_pred CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCeeeehHHHHhCC
Q 013784 225 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNP 303 (436)
Q Consensus 225 ~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P 303 (436)
+|+|+|+||||+... +.+ ++..|+++.++++ ++|||+||||.|++|+.++++ +|||+||+||+++.||
T Consensus 152 ~G~d~i~v~g~~~~~-~~~-------~~~~~~~i~~i~~---~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P 220 (318)
T 1vhn_A 152 EGVDEVFIHTRTVVQ-SFT-------GRAEWKALSVLEK---RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRP 220 (318)
T ss_dssp TTCCEEEEESSCTTT-TTS-------SCCCGGGGGGSCC---SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCT
T ss_pred hCCCEEEEcCCCccc-cCC-------CCcCHHHHHHHHc---CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCc
Confidence 999999999998632 211 1223555555544 899999999999999999999 8999999999999999
Q ss_pred cchhhhhhhhhc-CCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHhhhh
Q 013784 304 WYTLGHVDTAIY-GAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQTCKT 382 (436)
Q Consensus 304 ~lf~~~~~~~~~-g~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~k~~~~y~~~~~g~~~~r~~l~~~~~~~~~ 382 (436)
|+| ..+....+ | +.+..++.++++.+.+|++..++++|. ...+..++||+.||+++++++++||+++++. ++.++
T Consensus 221 ~l~-~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~ 296 (318)
T 1vhn_A 221 WIF-KQIKDFLRSG-KYSEPSREEILRTFERHLELLIKTKGE-RKAVVEMRKFLAGYTKDLKGARRFREKVMKI-EEVQI 296 (318)
T ss_dssp THH-HHHHHHHHHS-CCCCCCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHTTHHHHTTTCTTHHHHHHHHTTC-CCHHH
T ss_pred chH-HHHHHHHhCC-CCCCCCHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHhcCCChHHHHHHHHcC-CCHHH
Confidence 996 44444333 5 323356777778778888888888885 5689999999999999999999999988443 66666
Q ss_pred HHHHHHHHHHhCC
Q 013784 383 VKSFLEETIVAIP 395 (436)
Q Consensus 383 ~~~~l~~~~~~~~ 395 (436)
+.++++++++..+
T Consensus 297 ~~~~~~~~~~~~~ 309 (318)
T 1vhn_A 297 LKEMFYNFIKEVE 309 (318)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcc
Confidence 7777777665443
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=1.5e-35 Score=297.68 Aligned_cols=242 Identities=15% Similarity=0.169 Sum_probs=189.5
Q ss_pred CccccCCeecCCcEEEcCCCCC---------ChHHHHHHH-HHcCCCcEEEeccccchhhhh---------cccchhhh-
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW---------TDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLDRF- 117 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv---------td~~fr~~~-~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~- 117 (436)
+|++||+++|+|||++|||+++ |+..++++. +..||+|+++||++.+..... ...++..+
T Consensus 7 ~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~ 86 (338)
T 1z41_A 7 TPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFA 86 (338)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHH
T ss_pred CCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHH
Confidence 7899999999999999999865 566777776 445789999999997753221 11222222
Q ss_pred --h-ccCCCCCcEEEEEcCC-----------------------CH------------HHHHHHHHHHHHCCCCEEEecCC
Q 013784 118 --L-AFSPEQHPIVLQIGGS-----------------------NL------------DNLAKATELANAYNYDEINLNCG 159 (436)
Q Consensus 118 --~-~~~~~~~pi~vQL~g~-----------------------~p------------~~~~~aA~~~~~~G~d~IdLN~g 159 (436)
. .+|..+.++++||++. .| ++|+++|+++.++|||+||||++
T Consensus 87 ~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~ 166 (338)
T 1z41_A 87 KLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAA 166 (338)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccc
Confidence 2 2577889999999963 33 78999999999999999999999
Q ss_pred C---------CCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC--CCcHHHHHHHHHHHhhcCCcc
Q 013784 160 C---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD--HDSYNQLCDFIYKVSSLSPTR 228 (436)
Q Consensus 160 c---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~--~~~~~~~~~~la~~~e~~Gvd 228 (436)
| |.. +.|+|+||++++++++++.|++++|++++++||+||++..-.. ..+.++..+ +++.+++.|+|
T Consensus 167 ~gyLl~qFlsp~~-n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~-~a~~l~~~Gvd 244 (338)
T 1z41_A 167 HGYLIHEFLSPLS-NHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIG-FAKWMKEQGVD 244 (338)
T ss_dssp TTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHH-HHHHHHHTTCC
T ss_pred cchHHHHccCCCc-CCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHH-HHHHHHHcCCC
Confidence 7 764 6788999999999999999999999998899999999984111 123444444 46677889999
Q ss_pred EEEEccCcccccCCCCCCCCCCCC-ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehHHHHhCCcch
Q 013784 229 HFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 229 ~I~vhgrt~~~~G~~~~~~~~i~~-~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf 306 (436)
+|++|+++...... ..++ ..++++.++++.+ ++|||++|||.|++++.++++.| ||+|++||+++.|||++
T Consensus 245 ~i~v~~~~~~~~~~------~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~ 317 (338)
T 1z41_A 245 LIDCSSGALVHADI------NVFPGYQVSFAEKIREQA-DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFA 317 (338)
T ss_dssp EEEEECCCSSCCCC------CCCTTTTHHHHHHHHHHH-CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHH
T ss_pred EEEEecCccccCCC------CCCccchHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHH
Confidence 99999876320000 0112 2467777777765 89999999999999999999977 99999999999999997
Q ss_pred hh
Q 013784 307 LG 308 (436)
Q Consensus 307 ~~ 308 (436)
.+
T Consensus 318 ~k 319 (338)
T 1z41_A 318 RT 319 (338)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 4
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=5.7e-35 Score=297.19 Aligned_cols=237 Identities=13% Similarity=0.077 Sum_probs=187.9
Q ss_pred CccccCCeecCCcEEEcCCCCC-------ChHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchhhhh---
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLDRFL--- 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv-------td~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~--- 118 (436)
+|++||+++|+|||++|||++. |+.+++++++++| +|+++||++.+..... ..+++..+.
T Consensus 13 ~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 91 (377)
T 2r14_A 13 TPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV 91 (377)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred CCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 7899999999999999999976 9999999998886 8999999998863322 122222222
Q ss_pred -ccCCCCCcEEEEEcCC-------------------------------------------CH------------HHHHHH
Q 013784 119 -AFSPEQHPIVLQIGGS-------------------------------------------NL------------DNLAKA 142 (436)
Q Consensus 119 -~~~~~~~pi~vQL~g~-------------------------------------------~p------------~~~~~a 142 (436)
.+|..+.++++||++. .| ++|+++
T Consensus 92 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~a 171 (377)
T 2r14_A 92 EAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQA 171 (377)
T ss_dssp HHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 2578889999999861 23 799999
Q ss_pred HHHHHHCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccCC-cEEEEeccCC-C----C
Q 013784 143 TELANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIGV-D----D 207 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i-PvsvKiR~G~-~----~ 207 (436)
|+++.++|||+||||++| |. .+.|+|+||++++++++++.||+++|+++++. ||.+|++.+- . .
T Consensus 172 A~~a~~aGfDgVEIh~a~GYLl~QFlsp~-~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 172 AQRAKRAGFDMVEVHAANACLPNQFLATG-TNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHTCSEEEEEECTTCHHHHHHSTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHcCCCEEEEcCcccchHHhccCCc-cccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 999999999999999997 77 45788999999999999999999999998853 9999999852 1 1
Q ss_pred CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH
Q 013784 208 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 287 (436)
Q Consensus 208 ~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~ 287 (436)
..+.++..+ +++.++++|+|+|++|+++... ... .. .++++..+++.+ ++|||+|||| ++++++++++
T Consensus 251 ~~~~~~~~~-la~~le~~Gvd~i~v~~~~~~~-~~~------~~--~~~~~~~ik~~~-~iPvi~~Ggi-~~~~a~~~l~ 318 (377)
T 2r14_A 251 DEPEAMAFY-LAGELDRRGLAYLHFNEPDWIG-GDI------TY--PEGFREQMRQRF-KGGLIYCGNY-DAGRAQARLD 318 (377)
T ss_dssp SCHHHHHHH-HHHHHHHTTCSEEEEECCC-------------CC--CTTHHHHHHHHC-CSEEEEESSC-CHHHHHHHHH
T ss_pred CCCHHHHHH-HHHHHHHcCCCEEEEeCCcccC-CCC------cc--hHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHH
Confidence 223444444 4677889999999999876311 110 01 256666777765 8999999999 7999999999
Q ss_pred cC-CCeeeehHHHHhCCcchhh
Q 013784 288 KG-AHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 288 ~G-ad~VmiGRa~l~~P~lf~~ 308 (436)
.| ||+||+||+++.||||+.+
T Consensus 319 ~g~aD~V~igR~~l~~P~l~~k 340 (377)
T 2r14_A 319 DNTADAVAFGRPFIANPDLPER 340 (377)
T ss_dssp TTSCSEEEESHHHHHCTTHHHH
T ss_pred CCCceEEeecHHHHhCchHHHH
Confidence 65 9999999999999999744
No 5
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=1.3e-34 Score=293.45 Aligned_cols=236 Identities=14% Similarity=0.143 Sum_probs=188.8
Q ss_pred CccccCCeecCCcEEEcCCCCC---------ChHHHHHHHHHcCCCcEEEeccccchhhh--h-------cccchhhhhc
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW---------TDNHYRTLARLISKHAWLYTEMLAAETII--Y-------QQGNLDRFLA 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv---------td~~fr~~~~~~Gg~gl~~temv~~~~l~--~-------~~~~~~~~~~ 119 (436)
+|++||+++|+|||++|||++. |+.+++++++++| +|+++||++.+.... + ..+++..+.+
T Consensus 7 ~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~ 85 (364)
T 1vyr_A 7 TPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRAS-AGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKK 85 (364)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHH
T ss_pred CCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEEccccccccccCCCCCcccCCHHHHHHHHH
Confidence 7899999999999999999864 7899999998885 899999999876322 1 1222222222
Q ss_pred ----cCCCCCcEEEEEcC------------------------------------------CCH------------HHHHH
Q 013784 120 ----FSPEQHPIVLQIGG------------------------------------------SNL------------DNLAK 141 (436)
Q Consensus 120 ----~~~~~~pi~vQL~g------------------------------------------~~p------------~~~~~ 141 (436)
+|..+.++++||++ ..| ++|++
T Consensus 86 l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~ 165 (364)
T 1vyr_A 86 ITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQ 165 (364)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHH
Confidence 57788999999984 123 78999
Q ss_pred HHHHHHHCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccC--CCC--
Q 013784 142 ATELANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG--VDD-- 207 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G--~~~-- 207 (436)
+|+++.++|||+||||++| |. .+.|+|+||++++++++++.|++++|+++++ .||.+|++.+ +..
T Consensus 166 aA~~a~~aGfDgVeih~a~GyLl~qFlsp~-~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~ 244 (364)
T 1vyr_A 166 AVANAREAGFDLVELHSAHGYLLHQFLSPS-SNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD 244 (364)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHcCCCEEEEcCccchHHHhccCCc-ccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccccc
Confidence 9999999999999999997 65 4578899999999999999999999999885 3999999986 332
Q ss_pred --CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHH
Q 013784 208 --HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAA 285 (436)
Q Consensus 208 --~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~ 285 (436)
..+.++..+ +++.++++|+|+|++|+++.. +. ++..++++..+++.+ ++|||+|||| +++++.++
T Consensus 245 ~~~~~~~~~~~-~a~~l~~~G~d~i~v~~~~~~--~~--------~~~~~~~~~~v~~~~-~iPvi~~Ggi-t~~~a~~~ 311 (364)
T 1vyr_A 245 NGPNEEADALY-LIEELAKRGIAYLHMSETDLA--GG--------KPYSEAFRQKVRERF-HGVIIGAGAY-TAEKAEDL 311 (364)
T ss_dssp CCTTHHHHHHH-HHHHHHHTTCSEEEEECCBTT--BC--------CCCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHH
T ss_pred CCCCCHHHHHH-HHHHHHHhCCCEEEEecCccc--CC--------CcccHHHHHHHHHHC-CCCEEEECCc-CHHHHHHH
Confidence 224444444 467788999999999987531 11 112367777777765 8999999999 99999999
Q ss_pred HHcC-CCeeeehHHHHhCCcchhh
Q 013784 286 LRKG-AHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 286 l~~G-ad~VmiGRa~l~~P~lf~~ 308 (436)
++.| ||+||+||+++.|||++.+
T Consensus 312 l~~g~aD~V~~gR~~l~~P~~~~~ 335 (364)
T 1vyr_A 312 IGKGLIDAVAFGRDYIANPDLVAR 335 (364)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHCCCccEEEECHHHHhChhHHHH
Confidence 9966 9999999999999999744
No 6
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=3.1e-34 Score=288.16 Aligned_cols=242 Identities=14% Similarity=0.157 Sum_probs=188.1
Q ss_pred CccccCCeecCCcEEEcCCCC---------CChHHHHHHH-HHcCCCcEEEeccccchhhhh---------cccchhhhh
Q 013784 58 KAEMVARQYLPPWFSVAPMMD---------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLDRFL 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag---------vtd~~fr~~~-~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~ 118 (436)
+|++|++++|+|||++|||.. +|+....++. +..||+|+++||.+.+..-.. ..+.+..+.
T Consensus 7 ~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 86 (340)
T 3gr7_A 7 SPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLR 86 (340)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHH
T ss_pred CCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHH
Confidence 899999999999999999963 4677888886 556899999999877654321 122222222
Q ss_pred c----cCCCCCcEEEEEcCCC-----------------------------------HHHHHHHHHHHHHCCCCEEEecCC
Q 013784 119 A----FSPEQHPIVLQIGGSN-----------------------------------LDNLAKATELANAYNYDEINLNCG 159 (436)
Q Consensus 119 ~----~~~~~~pi~vQL~g~~-----------------------------------p~~~~~aA~~~~~~G~d~IdLN~g 159 (436)
+ +|..+.++++||++.. .++|++||++++++|||+||||++
T Consensus 87 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 87 ELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 2 5778899999997420 278999999999999999999999
Q ss_pred C---------CCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCC--CCCcHHHHHHHHHHHhhcCCcc
Q 013784 160 C---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD--DHDSYNQLCDFIYKVSSLSPTR 228 (436)
Q Consensus 160 c---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~--~~~~~~~~~~~la~~~e~~Gvd 228 (436)
| |.. +.|+|+||++++++++++.|++++|++++++||+||++..-. ...+.++..+ +++.++++|+|
T Consensus 167 ~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~-la~~L~~~Gvd 244 (340)
T 3gr7_A 167 HGYLINEFLSPLS-NRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVP-YAKRMKEQGVD 244 (340)
T ss_dssp TTCHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHH-HHHHHHHTTCC
T ss_pred cchHHHHcCCCcc-CcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHH-HHHHHHHcCCC
Confidence 5 874 678999999999999999999999999889999999998411 0112333344 45677889999
Q ss_pred EEEEccC-cccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehHHHHhCCcch
Q 013784 229 HFIIHSR-KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 229 ~I~vhgr-t~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf 306 (436)
+|++|.+ ..... ...-+...++++.++++.+ ++|||++|||.|+++++++++.| ||+|++||+++.||||+
T Consensus 245 ~i~vs~g~~~~~~------~~~~~~~~~~~~~~ik~~~-~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~ 317 (340)
T 3gr7_A 245 LVDVSSGAIVPAR------MNVYPGYQVPFAELIRREA-DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWP 317 (340)
T ss_dssp EEEEECCCSSCCC------CCCCTTTTHHHHHHHHHHT-TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHH
T ss_pred EEEEecCCccCCC------CCCCccccHHHHHHHHHHc-CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHH
Confidence 9999943 22100 0001122477777887776 89999999999999999999977 99999999999999997
Q ss_pred hh
Q 013784 307 LG 308 (436)
Q Consensus 307 ~~ 308 (436)
.+
T Consensus 318 ~k 319 (340)
T 3gr7_A 318 YA 319 (340)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 7
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=2.4e-34 Score=291.62 Aligned_cols=236 Identities=14% Similarity=0.101 Sum_probs=188.2
Q ss_pred CccccCCeecCCcEEEcCCCCC---------ChHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchhhhhc
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW---------TDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLDRFLA 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv---------td~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~~ 119 (436)
+|++||+++|+|||++|||++. |+.+++++++++| +|+++||++.+..... ..+++..+.+
T Consensus 7 ~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~ 85 (365)
T 2gou_A 7 QPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRI 85 (365)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHH
T ss_pred CCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHH
Confidence 7899999999999999999876 4889999998886 8999999998763321 1222222222
Q ss_pred ----cCCCCCcEEEEEcC------------------------------------------CCH------------HHHHH
Q 013784 120 ----FSPEQHPIVLQIGG------------------------------------------SNL------------DNLAK 141 (436)
Q Consensus 120 ----~~~~~~pi~vQL~g------------------------------------------~~p------------~~~~~ 141 (436)
+|..+.++++||++ ..| ++|++
T Consensus 86 l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~ 165 (365)
T 2gou_A 86 VTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQ 165 (365)
T ss_dssp HHHHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHH
Confidence 57788899999985 123 79999
Q ss_pred HHHHHHHCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccCC-cEEEEecc-CCC----
Q 013784 142 ATELANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRI-GVD---- 206 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i-PvsvKiR~-G~~---- 206 (436)
+|+++.++|||+||||++| |.. +.|+|+||++++++++++.|++++|+++++. ||.+|++. ++.
T Consensus 166 aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~-N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 166 AALNAMEAGFDGIELHAANGYLINQFIDSEA-NNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSGGG-CCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHcCCCEEEEecccchhHhhccCCCc-cCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 9999999999999999998 663 6789999999999999999999999998853 99999998 332
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
+..+.++..+ +++.++++|+|+|++|+++. .+.. ...++++..+++.+ ++|||+|||| +++++.+++
T Consensus 245 ~~~~~~~~~~-~a~~l~~~G~d~i~v~~~~~--~~~~--------~~~~~~~~~i~~~~-~iPvi~~Ggi-~~~~a~~~l 311 (365)
T 2gou_A 245 DADPILTYTA-AAALLNKHRIVYLHIAEVDW--DDAP--------DTPVSFKRALREAY-QGVLIYAGRY-NAEKAEQAI 311 (365)
T ss_dssp CSSHHHHHHH-HHHHHHHTTCSEEEEECCBT--TBCC--------CCCHHHHHHHHHHC-CSEEEEESSC-CHHHHHHHH
T ss_pred CCCCHHHHHH-HHHHHHHcCCCEEEEeCCCc--CCCC--------CccHHHHHHHHHHC-CCcEEEeCCC-CHHHHHHHH
Confidence 2234445444 46778889999999998753 1111 11266777777765 8999999999 999999999
Q ss_pred HcC-CCeeeehHHHHhCCcchhh
Q 013784 287 RKG-AHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 287 ~~G-ad~VmiGRa~l~~P~lf~~ 308 (436)
+.| ||+||+||+++.|||++.+
T Consensus 312 ~~g~aD~V~igR~~i~~P~l~~~ 334 (365)
T 2gou_A 312 NDGLADMIGFGRPFIANPDLPER 334 (365)
T ss_dssp HTTSCSEEECCHHHHHCTTHHHH
T ss_pred HCCCcceehhcHHHHhCchHHHH
Confidence 976 9999999999999999743
No 8
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=7.4e-34 Score=291.13 Aligned_cols=246 Identities=15% Similarity=0.120 Sum_probs=187.3
Q ss_pred CccccCCeecCCcEEEcCCCCC-------ChHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchhhh---h
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLDRF---L 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv-------td~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~---~ 118 (436)
+|++||+++|+|||++|||++. |+....++.+.+.|+|+++||++.+..... ..+++..+ .
T Consensus 20 ~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 99 (402)
T 2hsa_B 20 SPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIV 99 (402)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHH
T ss_pred CCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 7999999999999999999864 567777776555449999999998863221 12222222 2
Q ss_pred -ccCCCCCcEEEEEcC----------------------------------------CCH------------HHHHHHHHH
Q 013784 119 -AFSPEQHPIVLQIGG----------------------------------------SNL------------DNLAKATEL 145 (436)
Q Consensus 119 -~~~~~~~pi~vQL~g----------------------------------------~~p------------~~~~~aA~~ 145 (436)
.+|..+.++++||++ ..| ++|++||++
T Consensus 100 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~ 179 (402)
T 2hsa_B 100 DVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALN 179 (402)
T ss_dssp HHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 257888999999984 123 799999999
Q ss_pred HHHCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccC-C----CCCCc
Q 013784 146 ANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-V----DDHDS 210 (436)
Q Consensus 146 ~~~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G-~----~~~~~ 210 (436)
+.++|||+||||++| |. .+.|+|+||++++++++++.||+++|+++++ .||+||++.+ + ....+
T Consensus 180 a~~AGfDgVEIh~ahGYLl~QFLsp~-~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~ 258 (402)
T 2hsa_B 180 AIEAGFDGIEIHGAHGYLIDQFLKDG-INDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNP 258 (402)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCH
T ss_pred HHHcCCCEEEECCccchHHHhccCCc-cCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCC
Confidence 999999999999997 77 4578999999999999999999999999885 5999999986 2 12223
Q ss_pred HHHHHHHHHHHhhcCC------ccEEEEccCcccccCCCCCCCCCCC-C-ccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 211 YNQLCDFIYKVSSLSP------TRHFIIHSRKALLNGISPAENRTIP-P-LKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 211 ~~~~~~~la~~~e~~G------vd~I~vhgrt~~~~G~~~~~~~~i~-~-~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
.++..+ +++.++++| +|+|++|+++.......+. ..+. + ..++++..+++.+ ++|||+|||| +++++
T Consensus 259 ~~~~~~-la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~vk~~~-~iPvi~~G~i-~~~~a 333 (402)
T 2hsa_B 259 LSLGLA-VVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEA--GRLGSEEEEARLMRTLRNAY-QGTFICSGGY-TRELG 333 (402)
T ss_dssp HHHHHH-HHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSS--TTTTHHHHHHHHHHHHHHHC-SSCEEEESSC-CHHHH
T ss_pred HHHHHH-HHHHHHhcCCccCCceEEEEEecCccccccCCcc--ccccCCcchHHHHHHHHHHC-CCCEEEeCCC-CHHHH
Confidence 444444 467788899 9999999876321000000 0000 1 1356666777765 8999999999 99999
Q ss_pred HHHHHcC-CCeeeehHHHHhCCcchhhh
Q 013784 283 NAALRKG-AHHVMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 283 ~~~l~~G-ad~VmiGRa~l~~P~lf~~~ 309 (436)
+++++.| ||+||+||+++.||||+.+.
T Consensus 334 ~~~l~~g~aD~V~igR~~l~dP~l~~k~ 361 (402)
T 2hsa_B 334 IEAVAQGDADLVSYGRLFISNPDLVMRI 361 (402)
T ss_dssp HHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHCCCCceeeecHHHHhCchHHHHH
Confidence 9999955 99999999999999997543
No 9
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=5.1e-34 Score=290.19 Aligned_cols=239 Identities=14% Similarity=0.066 Sum_probs=183.5
Q ss_pred CccccCCeecCCcEEEcCCCCC-------ChHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchh---hhh
Q 013784 58 KAEMVARQYLPPWFSVAPMMDW-------TDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLD---RFL 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagv-------td~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~---~~~ 118 (436)
+|++||++.|+|||++|||++. |+....++.+.+-|+|+++||++.+..... ..+++. ++.
T Consensus 18 ~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 97 (376)
T 1icp_A 18 SPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIV 97 (376)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHH
T ss_pred CCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHHHHHHH
Confidence 7899999999999999999875 677777776555248999999998864322 122222 222
Q ss_pred -ccCCCCCcEEEEEcC--------------------------------------CCH------------HHHHHHHHHHH
Q 013784 119 -AFSPEQHPIVLQIGG--------------------------------------SNL------------DNLAKATELAN 147 (436)
Q Consensus 119 -~~~~~~~pi~vQL~g--------------------------------------~~p------------~~~~~aA~~~~ 147 (436)
.+|..+.++++||++ ..| ++|+++|+++.
T Consensus 98 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~ 177 (376)
T 1icp_A 98 DAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAI 177 (376)
T ss_dssp HHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 257888999999986 123 68999999999
Q ss_pred HCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccCC-cEEEEeccC-C----CCCCcHH
Q 013784 148 AYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-V----DDHDSYN 212 (436)
Q Consensus 148 ~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i-PvsvKiR~G-~----~~~~~~~ 212 (436)
++|||+||||++| |. .+.|+|.||++++++++++.|++++|+++++. ||++|++.+ + +...+.+
T Consensus 178 ~aGfDgVEih~a~GyLl~qFlsp~-~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~ 256 (376)
T 1icp_A 178 EAGFDGVEIHGAHGYLIDQFMKDQ-VNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTA 256 (376)
T ss_dssp HTTCSEEEEEECTTSHHHHHHCTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHH
T ss_pred HcCCCEEEEcCccchhhhhccCCc-ccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHH
Confidence 9999999999997 66 45788999999999999999999999998853 999999974 2 1222344
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CC
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AH 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad 291 (436)
+..+ +++.++++|+|+|++|+++....+. .. ..++++..+++.+ ++|||+|||| +++++.++++.| ||
T Consensus 257 ~~~~-la~~le~~Gvd~i~v~~~~~~~~~~-~~-------~~~~~~~~vr~~~-~iPvi~~G~i-~~~~a~~~l~~g~aD 325 (376)
T 1icp_A 257 LGLY-MVESLNKYDLAYCHVVEPRMKTAWE-KI-------ECTESLVPMRKAY-KGTFIVAGGY-DREDGNRALIEDRAD 325 (376)
T ss_dssp HHHH-HHHHHGGGCCSEEEEECCSCCC--------------CCCCSHHHHHHC-CSCEEEESSC-CHHHHHHHHHTTSCS
T ss_pred HHHH-HHHHHHHcCCCEEEEcCCcccCCCC-cc-------ccHHHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHCCCCc
Confidence 4444 5678889999999999876421111 00 0123344566655 8999999999 999999999955 99
Q ss_pred eeeehHHHHhCCcchhh
Q 013784 292 HVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 292 ~VmiGRa~l~~P~lf~~ 308 (436)
+||+||+++.||||+.+
T Consensus 326 ~V~~gR~~l~~P~l~~k 342 (376)
T 1icp_A 326 LVAYGRLFISNPDLPKR 342 (376)
T ss_dssp EEEESHHHHHCTTHHHH
T ss_pred EEeecHHHHhCccHHHH
Confidence 99999999999999754
No 10
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=2.1e-33 Score=282.01 Aligned_cols=241 Identities=16% Similarity=0.188 Sum_probs=187.8
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHH-HHcCCCcEEEeccccchhhhh---------cccchhhhhc
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLDRFLA 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~-~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~~ 119 (436)
+|++|++++|+|||++|||.. +|+....++. +..||+|+++||.+.+..-.. ....+..+.+
T Consensus 6 ~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~ 85 (343)
T 3kru_A 6 MPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKK 85 (343)
T ss_dssp SCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHH
T ss_pred ccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHH
Confidence 799999999999999999964 5778888886 556899999999877654322 1112222222
Q ss_pred ----cCCCCCcEEEEEcCCC------------------------------------HHHHHHHHHHHHHCCCCEEEec--
Q 013784 120 ----FSPEQHPIVLQIGGSN------------------------------------LDNLAKATELANAYNYDEINLN-- 157 (436)
Q Consensus 120 ----~~~~~~pi~vQL~g~~------------------------------------p~~~~~aA~~~~~~G~d~IdLN-- 157 (436)
+|..+.++++||++.. .++|++||+++.++|||+||||
T Consensus 86 ~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a 165 (343)
T 3kru_A 86 IVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAA 165 (343)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecc
Confidence 5778899999997410 2789999999999999999999
Q ss_pred -------CCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccC-CCC-CCcHHHHHHHHHHHhhcCC
Q 013784 158 -------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIG-VDD-HDSYNQLCDFIYKVSSLSP 226 (436)
Q Consensus 158 -------~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G-~~~-~~~~~~~~~~la~~~e~~G 226 (436)
+.||.. +.|+|+||++++++++++.|++++|++++ ++||.+|++.. +.+ ..+.++..+ +++.++++
T Consensus 166 hGYLl~qFlsp~~-N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~-~a~~l~~~- 242 (343)
T 3kru_A 166 HGYLIHEFLSPLS-NKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVE-YINMIKDK- 242 (343)
T ss_dssp TTSHHHHHHCTTT-CCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHH-HHHHHTTT-
T ss_pred cchhHHHhhcccc-cccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHH-HHHHhhcc-
Confidence 669994 67899999999999999999999999998 68999999983 322 123555555 46677888
Q ss_pred ccEEEE-ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehHHHHhCCc
Q 013784 227 TRHFII-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPW 304 (436)
Q Consensus 227 vd~I~v-hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~ 304 (436)
+|+|++ +|++..... ...+...++++.++++.+ ++|||+||||.|+++++++++.| ||+|++||+++.|||
T Consensus 243 vd~i~vs~g~~~~~~~------~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPd 315 (343)
T 3kru_A 243 VDLIDVSSGGLLNVDI------NLYPGYQVKYAETIKKRC-NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPY 315 (343)
T ss_dssp CSEEEEECCCSSCCCC------CCCTTTTHHHHHHHHHHH-TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred ccEEeccCCceEeeee------cccCceeehHHHHHHHhc-CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCe
Confidence 999999 576531000 001112467777777765 89999999999999999999966 999999999999999
Q ss_pred chhh
Q 013784 305 YTLG 308 (436)
Q Consensus 305 lf~~ 308 (436)
|+.+
T Consensus 316 l~~k 319 (343)
T 3kru_A 316 WVLH 319 (343)
T ss_dssp HHHH
T ss_pred EEEE
Confidence 9754
No 11
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=2.4e-32 Score=275.52 Aligned_cols=244 Identities=16% Similarity=0.176 Sum_probs=188.2
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHH-HHcCCCcEEEeccccchhhhh---------cccchhhhhc
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLDRFLA 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~-~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~~ 119 (436)
+|++|++++|+|||++|||.. +|+....++. +..||+|+++||.+.+..-.. ..+.+..+.+
T Consensus 6 ~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~ 85 (349)
T 3hgj_A 6 TPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKE 85 (349)
T ss_dssp SCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHH
T ss_pred CCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHH
Confidence 799999999999999999974 5778888886 556899999999877664321 2222333322
Q ss_pred ----cCCCCCcEEEEEcCC---------------------------------C------------HHHHHHHHHHHHHCC
Q 013784 120 ----FSPEQHPIVLQIGGS---------------------------------N------------LDNLAKATELANAYN 150 (436)
Q Consensus 120 ----~~~~~~pi~vQL~g~---------------------------------~------------p~~~~~aA~~~~~~G 150 (436)
+|..+..+++||++. . .++|++||+++.++|
T Consensus 86 ~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aG 165 (349)
T 3hgj_A 86 LARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAG 165 (349)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 577888999999631 0 278999999999999
Q ss_pred CCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCC-CC-CCcHHHHHHH
Q 013784 151 YDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV-DD-HDSYNQLCDF 217 (436)
Q Consensus 151 ~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~-~~-~~~~~~~~~~ 217 (436)
||+||||++| |.. +.|+|+||++++++++++.|++++|++++ ++||.+|++..- .+ ..+.++..+
T Consensus 166 fDgVEih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~- 243 (349)
T 3hgj_A 166 FQVIELHMAHGYLLSSFLSPLS-NQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLA- 243 (349)
T ss_dssp CCEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHH-
T ss_pred CCEEEECCccchHHHHhcCCcc-cccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHH-
Confidence 9999999999 884 67899999999999999999999999988 689999999731 11 113445444
Q ss_pred HHHHhhcCCccEEEEc-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeee
Q 013784 218 IYKVSSLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMV 295 (436)
Q Consensus 218 la~~~e~~Gvd~I~vh-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~Vmi 295 (436)
+++.+++.|+|+|++| |+....... ..-+...++++.++++.+ ++|||++|||.|+++++++++.| ||+|++
T Consensus 244 la~~L~~~Gvd~i~vs~g~~~~~~~~-----~~~~~~~~~~~~~ir~~~-~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 244 FARRLKELGVDLLDCSSGGVVLRVRI-----PLAPGFQVPFADAVRKRV-GLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp HHHHHHHTTCCEEEEECCCSCSSSCC-----CCCTTTTHHHHHHHHHHH-CCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHcCCCEEEEecCCcCccccc-----CCCccccHHHHHHHHHHc-CceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 4667788999999999 443210000 000112467777777765 89999999999999999999977 999999
Q ss_pred hHHHHhCCcchhhh
Q 013784 296 GRAAYQNPWYTLGH 309 (436)
Q Consensus 296 GRa~l~~P~lf~~~ 309 (436)
||+++.||+|+.+.
T Consensus 318 GR~~lanPdl~~k~ 331 (349)
T 3hgj_A 318 GRVLLRDPYFPLRA 331 (349)
T ss_dssp STHHHHCTTHHHHH
T ss_pred cHHHHhCchHHHHH
Confidence 99999999997543
No 12
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=5.2e-33 Score=286.00 Aligned_cols=246 Identities=12% Similarity=0.092 Sum_probs=186.6
Q ss_pred Ccccc-CCeecCCcEEEcCCCC--------CChHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchhhhhc
Q 013784 58 KAEMV-ARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLDRFLA 119 (436)
Q Consensus 58 ~p~~i-~~l~l~n~iilAPMag--------vtd~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~~ 119 (436)
+|++| ++++|+|||++|||.. +|+....++.++++|+|+++||.+.+..... ....+..+.+
T Consensus 29 ~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 108 (419)
T 3l5a_A 29 QSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTN 108 (419)
T ss_dssp SCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHH
T ss_pred CCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHH
Confidence 89999 9999999999999963 6788888888777789999999887764322 1222333322
Q ss_pred ----cCCCCCcEEEEEcCCC----------------------------------------HHHHHHHHHHHHHCCCCEEE
Q 013784 120 ----FSPEQHPIVLQIGGSN----------------------------------------LDNLAKATELANAYNYDEIN 155 (436)
Q Consensus 120 ----~~~~~~pi~vQL~g~~----------------------------------------p~~~~~aA~~~~~~G~d~Id 155 (436)
+|..+.++++||++.. .++|++||+++.++|||+||
T Consensus 109 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVE 188 (419)
T 3l5a_A 109 MASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVE 188 (419)
T ss_dssp HHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 5788999999998421 27899999999999999999
Q ss_pred ecCCC---------CCCccccCCCccccc-cCChHHHHHHHHHHhhcc------CCcEEEEeccCCCC----CCcHHHHH
Q 013784 156 LNCGC---------PSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT------NVPVSVKCRIGVDD----HDSYNQLC 215 (436)
Q Consensus 156 LN~gc---------P~~~v~r~g~yG~~L-l~~~~~l~eiv~av~~~~------~iPvsvKiR~G~~~----~~~~~~~~ 215 (436)
||++| |.. +.|+|+||+++ +++++++.||+++|++++ ++||++|++..-.. .-+.++..
T Consensus 189 IH~ahGYLl~QFlSp~~-N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~ 267 (419)
T 3l5a_A 189 ISIAQRLLIQTFFSTFS-NRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFN 267 (419)
T ss_dssp EECCTTSHHHHHHCTTT-CCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHH
T ss_pred ECCccchHHHHccCCcc-cccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHH
Confidence 99998 874 68899999999 999999999999999976 67999999872100 11344554
Q ss_pred HHHHHHhhc-CCccEEEEccCcccccCCCCCCCCCCCC-ccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCe
Q 013784 216 DFIYKVSSL-SPTRHFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHH 292 (436)
Q Consensus 216 ~~la~~~e~-~Gvd~I~vhgrt~~~~G~~~~~~~~i~~-~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~ 292 (436)
+ +++.+++ +|+|+|+||+++......... ..++ ..+.++..+++.+. ++|||+||||.|+++++++++. ||+
T Consensus 268 ~-la~~L~~~~Gvd~I~vs~g~~~~~~~~~~---~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDl 342 (419)
T 3l5a_A 268 Q-LIDWVMDVSNIQYLAIASWGRHIYQNTSR---TPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADM 342 (419)
T ss_dssp H-HHHHHHHHSCCCCEEECCTTCCGGGCBCC---CSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSE
T ss_pred H-HHHHHHhhcCCcEEEEeeCCccccccccC---CCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCc
Confidence 4 4566778 999999999876411000000 0011 12344445555443 6999999999999999999999 999
Q ss_pred eeehHHHHhCCcchhhh
Q 013784 293 VMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 293 VmiGRa~l~~P~lf~~~ 309 (436)
|++||+++.||||+.+.
T Consensus 343 VaiGR~~IanPdlv~ki 359 (419)
T 3l5a_A 343 VGMSSPFVTEPDFVHKL 359 (419)
T ss_dssp EEESTHHHHCTTHHHHH
T ss_pred HHHHHHHHHCcHHHHHH
Confidence 99999999999997543
No 13
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=3.3e-32 Score=274.90 Aligned_cols=231 Identities=17% Similarity=0.140 Sum_probs=179.8
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHHHHcCCCcEEEeccccchhhhhc---------ccchhhhhc-
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLDRFLA- 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~---------~~~~~~~~~- 119 (436)
+|++||+++|+|||++|||.. +|+...+++.+++. +|+++||.+.+...... .+.+..+.+
T Consensus 14 ~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l 92 (361)
T 3gka_A 14 DPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLV 92 (361)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHH
T ss_pred CCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHHHHHHH
Confidence 899999999999999999964 46778888876665 79999998877643221 112222222
Q ss_pred ---cCCCCCcEEEEEcCC------------------------------------C------------HHHHHHHHHHHHH
Q 013784 120 ---FSPEQHPIVLQIGGS------------------------------------N------------LDNLAKATELANA 148 (436)
Q Consensus 120 ---~~~~~~pi~vQL~g~------------------------------------~------------p~~~~~aA~~~~~ 148 (436)
+|..+.++++||++. . .++|++||+++.+
T Consensus 93 ~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~ 172 (361)
T 3gka_A 93 TDAVHAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENARA 172 (361)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 577888999999631 0 2789999999999
Q ss_pred CCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccCC-cEEEEeccC-----CCCCCcHHH
Q 013784 149 YNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIG-----VDDHDSYNQ 213 (436)
Q Consensus 149 ~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i-PvsvKiR~G-----~~~~~~~~~ 213 (436)
+|||+||||++| |. .+.|+|+||++++++++++.|++++|+++++. ||++|++.. +...++.++
T Consensus 173 aGfDgVEih~a~GYLl~QFLsp~-~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~ 251 (361)
T 3gka_A 173 AGFDGVEVHGANGYLLDQFLQDS-ANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAAT 251 (361)
T ss_dssp TTCSEEEEECCTTSHHHHHHSTT-TCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHH
T ss_pred cCCCEEEECCcCccHHHhccCcc-cccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHH
Confidence 999999999998 87 46789999999999999999999999998853 999999973 111122344
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCe
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHH 292 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~ 292 (436)
..+ +++.++++|+|+|++|+++. |. +++.++++.+ ++|||+|||| |+++++++++.| ||+
T Consensus 252 ~~~-la~~l~~~Gvd~i~v~~~~~---~~-------------~~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~G~aD~ 312 (361)
T 3gka_A 252 FGH-VARELGRRRIAFLFARESFG---GD-------------AIGQQLKAAF-GGPFIVNENF-TLDSAQAALDAGQADA 312 (361)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCS---TT-------------CCHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSE
T ss_pred HHH-HHHHHHHcCCCEEEECCCCC---CH-------------HHHHHHHHHc-CCCEEEeCCC-CHHHHHHHHHcCCccE
Confidence 444 56778899999999998751 11 1133444544 7999999999 999999999965 999
Q ss_pred eeehHHHHhCCcchhhh
Q 013784 293 VMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 293 VmiGRa~l~~P~lf~~~ 309 (436)
|++||+++.||||+.+.
T Consensus 313 V~iGR~~ladPdl~~k~ 329 (361)
T 3gka_A 313 VAWGKLFIANPDLPRRF 329 (361)
T ss_dssp EEESHHHHHCTTHHHHH
T ss_pred EEECHHhHhCcHHHHHH
Confidence 99999999999997543
No 14
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=8.5e-32 Score=272.80 Aligned_cols=245 Identities=16% Similarity=0.157 Sum_probs=187.7
Q ss_pred CccccCCeecCCcEEEcCCCC-------CChHHHHHHH-HHcCCCcEEEeccccchhhhh---------cccchhhhhc-
Q 013784 58 KAEMVARQYLPPWFSVAPMMD-------WTDNHYRTLA-RLISKHAWLYTEMLAAETIIY---------QQGNLDRFLA- 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag-------vtd~~fr~~~-~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~~- 119 (436)
+|++|++++|+|||++|||.. +|+....++. +..||+|+++||.+.+..-.. ..+.+..+.+
T Consensus 6 ~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~ 85 (363)
T 3l5l_A 6 EPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPV 85 (363)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHH
T ss_pred CCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHH
Confidence 799999999999999999974 5788888886 566899999999887664322 1112222222
Q ss_pred ---cCCCCCcEEEEEcCC----------------------------------------C------------HHHHHHHHH
Q 013784 120 ---FSPEQHPIVLQIGGS----------------------------------------N------------LDNLAKATE 144 (436)
Q Consensus 120 ---~~~~~~pi~vQL~g~----------------------------------------~------------p~~~~~aA~ 144 (436)
+|..+..+++||++. . .++|++||+
T Consensus 86 ~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~ 165 (363)
T 3l5l_A 86 VQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAAR 165 (363)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 577788899999731 0 268999999
Q ss_pred HHHHCCCCEEEecCC---------CCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCC-CCC--Cc
Q 013784 145 LANAYNYDEINLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGV-DDH--DS 210 (436)
Q Consensus 145 ~~~~~G~d~IdLN~g---------cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~-~~~--~~ 210 (436)
++.++|||+||||++ ||.. +.|+|+||++++++++++.|++++|++++ ++||.+|++..- .+. .+
T Consensus 166 ~a~~aGfDgVEih~a~GyLl~qFlsp~~-N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~ 244 (363)
T 3l5l_A 166 RARDAGFEWIELHFAHGYLGQSFFSEHS-NKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQT 244 (363)
T ss_dssp HHHHHTCSEEEEEECTTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHH
T ss_pred HHHHcCCCEEEEccccchHHHHccCCCc-CCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCC
Confidence 999999999999998 5874 68899999999999999999999999988 589999999741 111 12
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG- 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G- 289 (436)
.++..+ +++.++++|+|+|++|++........+ .-+...++++..+++.+ ++|||++|||.|+++++++++.|
T Consensus 245 ~~~~~~-la~~L~~~Gvd~i~vs~g~~~~~~~~~----~~~~~~~~~~~~ir~~~-~iPVi~~GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 245 LEESIE-LARRFKAGGLDLLSVSVGFTIPDTNIP----WGPAFMGPIAERVRREA-KLPVTSAWGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHH-HHHHHHHTTCCEEEEEECCCSSCCCCC----CCTTTTHHHHHHHHHHH-TCCEEECSSTTSHHHHHHHHHTTS
T ss_pred HHHHHH-HHHHHHHcCCCEEEEecCccccccccC----CCcchhHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHCCC
Confidence 344444 466778899999999975421000000 00112366677777665 89999999999999999999977
Q ss_pred CCeeeehHHHHhCCcchhhh
Q 013784 290 AHHVMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 290 ad~VmiGRa~l~~P~lf~~~ 309 (436)
||+|++||+++.||+|+.+.
T Consensus 319 aD~V~iGR~~lanPdl~~k~ 338 (363)
T 3l5l_A 319 LDLVSVGRAHLADPHWAYFA 338 (363)
T ss_dssp CSEEECCHHHHHCTTHHHHH
T ss_pred ccEEEecHHHHhCchHHHHH
Confidence 99999999999999997443
No 15
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=5.7e-32 Score=273.23 Aligned_cols=230 Identities=16% Similarity=0.124 Sum_probs=179.3
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHHHHcCCCcEEEeccccchhhhhc---------ccchhhhhc-
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLDRFLA- 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~---------~~~~~~~~~- 119 (436)
+|++|++++|+|||++|||.. +|+...+++.+++. +|+++||.+.+..-... ...+..+.+
T Consensus 6 ~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l 84 (362)
T 4ab4_A 6 DPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNV 84 (362)
T ss_dssp SCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHH
T ss_pred CCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHH
Confidence 799999999999999999964 46778888877665 79999998876643221 112222222
Q ss_pred ---cCCCCCcEEEEEcCC------------------------------------C------------HHHHHHHHHHHHH
Q 013784 120 ---FSPEQHPIVLQIGGS------------------------------------N------------LDNLAKATELANA 148 (436)
Q Consensus 120 ---~~~~~~pi~vQL~g~------------------------------------~------------p~~~~~aA~~~~~ 148 (436)
+|..+.++++||++. . .++|++||+++.+
T Consensus 85 ~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~~ 164 (362)
T 4ab4_A 85 TKAVHAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAKA 164 (362)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 577888999999631 0 2689999999999
Q ss_pred CCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccCC-cEEEEeccCCC-----CCCcHHH
Q 013784 149 YNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV-PVSVKCRIGVD-----DHDSYNQ 213 (436)
Q Consensus 149 ~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i-PvsvKiR~G~~-----~~~~~~~ 213 (436)
+|||+||||++| |. .+.|+|+||++++++++++.||+++|+++++. ||++|++..-. ..++.++
T Consensus 165 aGfDgVEih~a~GYLl~QFLSp~-~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~ 243 (362)
T 4ab4_A 165 AGFDGVEIHGANGYLLDQFLQSS-TNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAET 243 (362)
T ss_dssp TTCSEEEEECCTTSHHHHHHSTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHH
T ss_pred cCCCEEEECCcCccHHHhhcCCc-cccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHH
Confidence 999999999998 87 46789999999999999999999999998853 99999997411 1112334
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCe
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHH 292 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~ 292 (436)
..+ +++.++++|+|+|++|+++. |. + ++.++++.+ ++|||+|||| |+++++++++.| ||+
T Consensus 244 ~~~-la~~l~~~Gvd~i~v~~~~~---~~---------~----~~~~ik~~~-~iPvi~~Ggi-t~e~a~~~l~~g~aD~ 304 (362)
T 4ab4_A 244 FTY-VARELGKRGIAFICSREREA---DD---------S----IGPLIKEAF-GGPYIVNERF-DKASANAALASGKADA 304 (362)
T ss_dssp HHH-HHHHHHHTTCSEEEEECCCC---TT---------C----CHHHHHHHH-CSCEEEESSC-CHHHHHHHHHTTSCSE
T ss_pred HHH-HHHHHHHhCCCEEEECCCCC---CH---------H----HHHHHHHHC-CCCEEEeCCC-CHHHHHHHHHcCCccE
Confidence 444 56778899999999998751 21 1 133444544 7999999999 999999999965 999
Q ss_pred eeehHHHHhCCcchhh
Q 013784 293 VMVGRAAYQNPWYTLG 308 (436)
Q Consensus 293 VmiGRa~l~~P~lf~~ 308 (436)
|++||+++.||||+.+
T Consensus 305 V~iGR~~lanPdl~~k 320 (362)
T 4ab4_A 305 VAFGVPFIANPDLPAR 320 (362)
T ss_dssp EEESHHHHHCTTHHHH
T ss_pred EEECHHhHhCcHHHHH
Confidence 9999999999999744
No 16
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=5.5e-31 Score=289.15 Aligned_cols=244 Identities=10% Similarity=0.043 Sum_probs=182.4
Q ss_pred CccccCCeecCCcEEEcCCCCCC-h----HHHHHHH-HHcCCCcEEEeccccchhhhhc----------ccchhhhh---
Q 013784 58 KAEMVARQYLPPWFSVAPMMDWT-D----NHYRTLA-RLISKHAWLYTEMLAAETIIYQ----------QGNLDRFL--- 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagvt-d----~~fr~~~-~~~Gg~gl~~temv~~~~l~~~----------~~~~~~~~--- 118 (436)
+|++|++++|+|||++|||++.. + ...+++. +..||+|+++||++++...... ...+..+.
T Consensus 11 ~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (729)
T 1o94_A 11 EPIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMT 90 (729)
T ss_dssp SCEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHH
T ss_pred CCeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHH
Confidence 78999999999999999998642 1 3334443 4458899999999988632211 11112222
Q ss_pred -ccCCCCCcEEEEEcCC------------------------C---------------HHHHHHHHHHHHHCCCCEEEecC
Q 013784 119 -AFSPEQHPIVLQIGGS------------------------N---------------LDNLAKATELANAYNYDEINLNC 158 (436)
Q Consensus 119 -~~~~~~~pi~vQL~g~------------------------~---------------p~~~~~aA~~~~~~G~d~IdLN~ 158 (436)
.+|..+.++++||++. . .++|++||+++.++|||+||||+
T Consensus 91 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~ 170 (729)
T 1o94_A 91 DEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYG 170 (729)
T ss_dssp HHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 2678899999999982 1 37999999999999999999999
Q ss_pred CC---------CCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEecc-------CCCCCCcHHHHHHHHHH
Q 013784 159 GC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI-------GVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 159 gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~-------G~~~~~~~~~~~~~la~ 220 (436)
+| |. .+.|+|+||++++++++++.||+++|++++ ++||.+|++. |++.. ++..+ +++
T Consensus 171 a~gyLl~qFlsp~-~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~---~~~~~-~~~ 245 (729)
T 1o94_A 171 AHSYLPLQFLNPY-YNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAE---VDGQK-FVE 245 (729)
T ss_dssp CTTCHHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTT---THHHH-HHH
T ss_pred ccchHHHHhcCCc-cCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCch---HHHHH-HHH
Confidence 99 76 467899999999999999999999999988 7899999986 34311 23334 356
Q ss_pred HhhcCCccEEEEccCccc-ccCCCCCCCCCCCCc-cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehH
Q 013784 221 VSSLSPTRHFIIHSRKAL-LNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGR 297 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~-~~G~~~~~~~~i~~~-~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGR 297 (436)
++++ |+|+|.+|++... ..+..... ...++. .+.++..+++.+ ++|||+||+|.|+++++++++.| ||+||+||
T Consensus 246 ~l~~-~~d~~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~-~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR 322 (729)
T 1o94_A 246 MADS-LVDMWDITIGDIAEWGEDAGPS-RFYQQGHTIPWVKLVKQVS-KKPVLGVGRYTDPEKMIEIVTKGYADIIGCAR 322 (729)
T ss_dssp HHGG-GCSEEEEEECCSTTGGGTSCCT-TTCCTTTTHHHHHHHHTTC-SSCEECCSCCCCHHHHHHHHHTTSCSBEEESH
T ss_pred HHHh-hcCEEEEeeecccccccccCCc-cccCccccHHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCc
Confidence 6776 7999999986420 00100000 011221 356666776664 99999999999999999999965 99999999
Q ss_pred HHHhCCcchhhh
Q 013784 298 AAYQNPWYTLGH 309 (436)
Q Consensus 298 a~l~~P~lf~~~ 309 (436)
+++.||||+.+.
T Consensus 323 ~~l~~P~~~~~~ 334 (729)
T 1o94_A 323 PSIADPFLPQKV 334 (729)
T ss_dssp HHHHCTTHHHHH
T ss_pred hhhcCchHHHHH
Confidence 999999997543
No 17
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.97 E-value=5.5e-31 Score=286.52 Aligned_cols=246 Identities=14% Similarity=0.071 Sum_probs=184.9
Q ss_pred CccccCCeecCCcEEEcCCCC-CCh------HHHHHHH-HHcCCCcEEEeccccchhhh--h-------cccchhhhh--
Q 013784 58 KAEMVARQYLPPWFSVAPMMD-WTD------NHYRTLA-RLISKHAWLYTEMLAAETII--Y-------QQGNLDRFL-- 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag-vtd------~~fr~~~-~~~Gg~gl~~temv~~~~l~--~-------~~~~~~~~~-- 118 (436)
+|++|++++|+|||++|||++ .++ ...+++. +..||+|+++||++++.... + ...++..+.
T Consensus 7 ~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (671)
T 1ps9_A 7 APLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTI 86 (671)
T ss_dssp CCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHH
T ss_pred CCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHH
Confidence 789999999999999999997 333 2244444 44578999999999876322 1 122233332
Q ss_pred --ccCCCCCcEEEEEcCC----------------------CH------------HHHHHHHHHHHHCCCCEEEecCCC--
Q 013784 119 --AFSPEQHPIVLQIGGS----------------------NL------------DNLAKATELANAYNYDEINLNCGC-- 160 (436)
Q Consensus 119 --~~~~~~~pi~vQL~g~----------------------~p------------~~~~~aA~~~~~~G~d~IdLN~gc-- 160 (436)
.+|..+.++++||++. .| ++|+++|+++.++|||+||||++|
T Consensus 87 ~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gy 166 (671)
T 1ps9_A 87 TEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGY 166 (671)
T ss_dssp HHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTS
T ss_pred HHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch
Confidence 2577889999999974 33 789999999999999999999997
Q ss_pred -------CCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCC--CCCcHHHHHHHHHHHhhcCCccE
Q 013784 161 -------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD--DHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 161 -------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~--~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
|. .+.|+|+||++++++++++.|++++|++++ ++||.+|++..-. ...+.++..+ +++.++++|+|+
T Consensus 167 l~~qFlsp~-~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~-~a~~l~~~g~d~ 244 (671)
T 1ps9_A 167 LINEFLTLR-TNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVE-LAQAIEAAGATI 244 (671)
T ss_dssp HHHHHHCTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHH-HHHHHHHHTCSE
T ss_pred HHHHhCCCc-cCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHH-HHHHHHhcCCCE
Confidence 65 467889999999999999999999999988 6899999997211 1123445444 456778899999
Q ss_pred EEEccCcccccCCCCCCCCCCCCc-cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehHHHHhCCcchh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPL-KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~-~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~ 307 (436)
|++|+++..... +......++. .++++.++++.+ ++|||++|||.+++++.++++.| ||+|++||+++.|||++.
T Consensus 245 i~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~-~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~ 321 (671)
T 1ps9_A 245 INTGIGWHEARI--PTIATPVPRGAFSWVTRKLKGHV-SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLS 321 (671)
T ss_dssp EEEEECBTTCSS--CSSSTTSCTTTTHHHHHHHTTSC-SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHH
T ss_pred EEcCCCcccccc--ccccccCCcchHHHHHHHHHHhc-CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHH
Confidence 999986531110 0000111222 246666666554 99999999999999999999976 999999999999999974
Q ss_pred h
Q 013784 308 G 308 (436)
Q Consensus 308 ~ 308 (436)
+
T Consensus 322 k 322 (671)
T 1ps9_A 322 K 322 (671)
T ss_dssp H
T ss_pred H
Confidence 3
No 18
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=4.2e-31 Score=288.31 Aligned_cols=246 Identities=9% Similarity=0.030 Sum_probs=178.2
Q ss_pred CccccCCeecCCcEEEcCCCCCCh----HHHHHH--HHHcCCCcEEEeccccchhhhhc----------ccchhhhhc--
Q 013784 58 KAEMVARQYLPPWFSVAPMMDWTD----NHYRTL--ARLISKHAWLYTEMLAAETIIYQ----------QGNLDRFLA-- 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagvtd----~~fr~~--~~~~Gg~gl~~temv~~~~l~~~----------~~~~~~~~~-- 119 (436)
+|++||+++|+|||++|||++.++ ....++ .+..||+|+++||++.+...... ...+..+.+
T Consensus 16 ~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (690)
T 3k30_A 16 EPVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIA 95 (690)
T ss_dssp CCCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHH
T ss_pred CCeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHH
Confidence 789999999999999999985432 223322 25668899999999987644321 112222222
Q ss_pred --cCCCCCcEEEEEcCC--------------------------C---------------HHHHHHHHHHHHHCCCCEEEe
Q 013784 120 --FSPEQHPIVLQIGGS--------------------------N---------------LDNLAKATELANAYNYDEINL 156 (436)
Q Consensus 120 --~~~~~~pi~vQL~g~--------------------------~---------------p~~~~~aA~~~~~~G~d~IdL 156 (436)
+|..+.++++||++. . .++|++||++++++|||+|||
T Consensus 96 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 96 DAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 577889999999951 0 388999999999999999999
Q ss_pred cCCCCC---------CccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCC--CCCcHHHHHHHHHHHhh
Q 013784 157 NCGCPS---------PKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVD--DHDSYNQLCDFIYKVSS 223 (436)
Q Consensus 157 N~gcP~---------~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~--~~~~~~~~~~~la~~~e 223 (436)
|++|++ ..|.|+|+||+++++|++++.||+++|+++++ +||.+|+...-. ..-+.++..+ +++.++
T Consensus 176 h~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~-~~~~l~ 254 (690)
T 3k30_A 176 YGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEG-VLRELG 254 (690)
T ss_dssp EECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHH-HHHHHT
T ss_pred cccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHH-HHHHHH
Confidence 998776 23678999999999999999999999999885 567666644210 1112445544 466777
Q ss_pred cCCccEEEEccCcccccCCCCCCCCCCCC-ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeeehHHHHh
Q 013784 224 LSPTRHFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMVGRAAYQ 301 (436)
Q Consensus 224 ~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~-~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~VmiGRa~l~ 301 (436)
+ |+|+|++|+++.... ..+. ...++ ..+.++..+++. .++|||+||||.++++++++++.| ||+|++||+++.
T Consensus 255 ~-~~d~~~v~~~~~~~~-~~~~--~~~~~~~~~~~~~~i~~~-~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 255 E-LPDLWDFAMGSWEGD-SVTS--RFAPEGRQEEFVAGLKKL-TTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp T-SSSEEEEECSCHHHH-TCCT--TTCCTTTTHHHHTTSGGG-CSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred h-hcCEEEEeccccccc-CCCC--ccCCccccHHHHHHHHHH-cCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHh
Confidence 6 899999998652100 0000 00111 124555555554 489999999999999999999955 999999999999
Q ss_pred CCcchhhh
Q 013784 302 NPWYTLGH 309 (436)
Q Consensus 302 ~P~lf~~~ 309 (436)
||||+.+.
T Consensus 330 ~P~~~~~~ 337 (690)
T 3k30_A 330 DPFLPNKI 337 (690)
T ss_dssp CTTHHHHH
T ss_pred CccHHHHH
Confidence 99997543
No 19
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.97 E-value=3.9e-30 Score=255.05 Aligned_cols=232 Identities=16% Similarity=0.137 Sum_probs=178.5
Q ss_pred ccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc--------------------hhhhh
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN--------------------LDRFL 118 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~--------------------~~~~~ 118 (436)
+.+++++.++|||++|+..--.+.+++..+.+.| +|+++|+++++++... +++ .+.++
T Consensus 3 ~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~g-n~~pr~~~~~~~~in~~g~~~~g~~~~~ 80 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVHCMTIEDLEELKASQ-AGAYITKSSTLEKREG-NPLPRYVDLELGSINSMGLPNLGFDYYL 80 (311)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCC-SCSCCEEEETTEEEECCCCCBSCHHHHH
T ss_pred ceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCC-CCEEEeCccCCcccCC-CCCCcEEecccceeecCCCCCccHHHHH
Confidence 4568999999999999743113788888887775 8999999999886321 111 12111
Q ss_pred ----ccC-CC--CCcEEEEEcCCCHHHHHHHHHHHHHCCCC-EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHh
Q 013784 119 ----AFS-PE--QHPIVLQIGGSNLDNLAKATELANAYNYD-EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIA 190 (436)
Q Consensus 119 ----~~~-~~--~~pi~vQL~g~~p~~~~~aA~~~~~~G~d-~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~ 190 (436)
... .. +.|+++||+|.+++++.++++.+.++|+| +||||++||.. .+ |..+..+++.+.+++++|+
T Consensus 81 ~~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~--~g----~~~~g~~~e~~~~iv~~vr 154 (311)
T 1jub_A 81 DYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV--PG----EPQLAYDFEATEKLLKEVF 154 (311)
T ss_dssp HHHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS--SS----CCCGGGCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC--CC----cccccCCHHHHHHHHHHHH
Confidence 111 23 78999999999999999999999999999 99999999996 22 4445578999999999999
Q ss_pred hccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc----c--------------ccCCCCCCCCCCCC
Q 013784 191 ANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA----L--------------LNGISPAENRTIPP 252 (436)
Q Consensus 191 ~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~----~--------------~~G~~~~~~~~i~~ 252 (436)
+.+++||.+|++.+++ .+++.+ +++.++++|+|+|++|+++. . .+|.++ ..+.+
T Consensus 155 ~~~~~Pv~vKi~~~~~----~~~~~~-~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg---~~~~~ 226 (311)
T 1jub_A 155 TFFTKPLGVKLPPYFD----LVHFDI-MAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG---AYIKP 226 (311)
T ss_dssp TTCCSCEEEEECCCCS----HHHHHH-HHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES---GGGHH
T ss_pred HhcCCCEEEEECCCCC----HHHHHH-HHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc---ccccH
Confidence 9999999999998863 223333 35677889999999998851 0 011111 11223
Q ss_pred ccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh-CCcch
Q 013784 253 LKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYT 306 (436)
Q Consensus 253 ~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf 306 (436)
..+++++++++.+. ++|||++|||.|++|+.+++++|||+||+||+++. +||+|
T Consensus 227 ~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~ 282 (311)
T 1jub_A 227 TALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIF 282 (311)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHH
Confidence 34777888877653 89999999999999999999999999999999996 99986
No 20
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.97 E-value=5.9e-30 Score=254.08 Aligned_cols=233 Identities=16% Similarity=0.156 Sum_probs=178.2
Q ss_pred ccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh-------------------cccchhhhh-
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY-------------------QQGNLDRFL- 118 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~-------------------~~~~~~~~~- 118 (436)
+.+++++.++|||++|++.--.+.+++..+.+. |+|+++|+++++++... .++..+.++
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~-G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~ 83 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVLCSTEEDLRCMTAS-SSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLK 83 (314)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHS-SCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHH
T ss_pred ceEECCEecCCCcEECCCCCCCCHHHHHHHHHC-CCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHH
Confidence 456899999999999986622356777777766 48999999999876321 111122221
Q ss_pred --c-c-CCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC---EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhh
Q 013784 119 --A-F-SPEQHPIVLQIGGSNLDNLAKATELANAYNYD---EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA 191 (436)
Q Consensus 119 --~-~-~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d---~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~ 191 (436)
. . ...+.|+++||+|.+++++.++++.+.++|+| +||||++||.. .+ |..+..+++.+.+++++|++
T Consensus 84 ~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~--~g----~~~~g~~~~~~~~ii~~vr~ 157 (314)
T 2e6f_A 84 YASDLHDYSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV--PG----KPQVAYDFEAMRTYLQQVSL 157 (314)
T ss_dssp HHHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS--TT----CCCGGGSHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC--CC----chhhcCCHHHHHHHHHHHHH
Confidence 1 1 22478999999999999999999999999999 99999999996 22 34445789999999999999
Q ss_pred ccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCC-ccEEEEccCccc------------------ccCCCCCCCCCCCC
Q 013784 192 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHSRKAL------------------LNGISPAENRTIPP 252 (436)
Q Consensus 192 ~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~G-vd~I~vhgrt~~------------------~~G~~~~~~~~i~~ 252 (436)
.+++||.+|++.+++ .+++.+ +++.++++| +|+|++|+++.. .+|.++ ..+.+
T Consensus 158 ~~~~Pv~vK~~~~~~----~~~~~~-~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg---~~~~p 229 (314)
T 2e6f_A 158 AYGLPFGVKMPPYFD----IAHFDT-AAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG---KYILP 229 (314)
T ss_dssp HHCSCEEEEECCCCC----HHHHHH-HHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES---GGGHH
T ss_pred hcCCCEEEEECCCCC----HHHHHH-HHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc---ccccH
Confidence 889999999998863 233333 355667899 999999997720 011111 11123
Q ss_pred ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh-CCcch
Q 013784 253 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYT 306 (436)
Q Consensus 253 ~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf 306 (436)
..+++++++++.++++|||++|||.|++|+.+++++|||+||+||+++. +||+|
T Consensus 230 ~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l~~~p~~~ 284 (314)
T 2e6f_A 230 TALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVGTALQEEGPGIF 284 (314)
T ss_dssp HHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEECHHHHHHCTTHH
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchhhHhcCcHHH
Confidence 3467888887765589999999999999999999999999999999996 99986
No 21
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.97 E-value=2e-30 Score=264.60 Aligned_cols=241 Identities=11% Similarity=0.023 Sum_probs=176.3
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHHHHc-CCCcEEEeccccchhhhhcc----------cchhhhh
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLARLI-SKHAWLYTEMLAAETIIYQQ----------GNLDRFL 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~~~~-Gg~gl~~temv~~~~l~~~~----------~~~~~~~ 118 (436)
+|++||+++|+|||++|||.. .|+....++.+++ ||+|+++||.+.+..-.... +.+..+.
T Consensus 16 ~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k 95 (407)
T 3tjl_A 16 QSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWK 95 (407)
T ss_dssp SCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHH
T ss_pred CCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHH
Confidence 899999999999999999973 3777888887554 78999999987765432211 1122222
Q ss_pred c----cCCCCCcEEEEEcCCC-------------------------------------------------HHH-HHHHHH
Q 013784 119 A----FSPEQHPIVLQIGGSN-------------------------------------------------LDN-LAKATE 144 (436)
Q Consensus 119 ~----~~~~~~pi~vQL~g~~-------------------------------------------------p~~-~~~aA~ 144 (436)
+ +|..+..+++||++.. .++ |++||+
T Consensus 96 ~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~aa~ 175 (407)
T 3tjl_A 96 VITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQ 175 (407)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 2 5778889999997420 146 999999
Q ss_pred HHHHCCCCEEEecCCC---------CCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccCCCC------C
Q 013784 145 LANAYNYDEINLNCGC---------PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDD------H 208 (436)
Q Consensus 145 ~~~~~G~d~IdLN~gc---------P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G~~~------~ 208 (436)
++.++|||+||||++| |. .+.|+|+||++++++++++.||+++|+++++ .||++|++. |+. .
T Consensus 176 ~a~~aGfdgveih~~~GYLl~QFLsp~-~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~~~~g~~~~ 253 (407)
T 3tjl_A 176 KAMDAGFDYIELHAAHGYLLDQFLQPC-TNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WATFQNMKAH 253 (407)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHSTT-TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCGGGCCGG
T ss_pred HHHHhCCCeEEECCccchHHHHhcCcc-ccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-ccccCCCccc
Confidence 9999999999999999 87 4678999999999999999999999999886 489999887 332 1
Q ss_pred -C---cHHHHHHHHHHHh---hcCC--ccEEEEc-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC
Q 013784 209 -D---SYNQLCDFIYKVS---SLSP--TRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 278 (436)
Q Consensus 209 -~---~~~~~~~~la~~~---e~~G--vd~I~vh-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s 278 (436)
+ ..++.. .+++.+ ++.| +|+|++| +|+... ...+..+ . +..+..+.+.+ ++|||+||||.+
T Consensus 254 ~d~~~~~~~~~-~l~~~L~~~~~~G~~l~ylhv~~~~~~~~-~~~~~~~-~-----~~~~~~ir~~~-~~PvI~~Ggi~~ 324 (407)
T 3tjl_A 254 KDTVHPLTTFS-YLVHELQQRADKGQGIAYISVVEPRVSGN-VDVSEED-Q-----AGDNEFVSKIW-KGVILKAGNYSY 324 (407)
T ss_dssp GSSSCHHHHHH-HHHHHHHHHHHTTCCCSEEEEECTTEETT-EECCGGG-C-----CCCSHHHHHHC-CSEEEEESCGGG
T ss_pred ccccccHHHHH-HHHHHHHhHhhcCCceeEEEEEccccCCC-CcCCccc-h-----hHHHHHHHHHh-CCCEEecCCCCC
Confidence 1 122233 345566 6789 9999998 665311 0111000 0 11122333444 789999999999
Q ss_pred HHHHHHHHH----cCCCeeeehHHHHhCCcchhhh
Q 013784 279 VDEVNAALR----KGAHHVMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 279 ~~da~~~l~----~Gad~VmiGRa~l~~P~lf~~~ 309 (436)
.+++.++++ .+||+|++||+++.||||+.+.
T Consensus 325 ~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri 359 (407)
T 3tjl_A 325 DAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKL 359 (407)
T ss_dssp GTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHH
Confidence 887777775 4699999999999999997543
No 22
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.97 E-value=2.1e-29 Score=256.23 Aligned_cols=234 Identities=10% Similarity=0.053 Sum_probs=177.5
Q ss_pred CccccCCeecCCcEEEcCCCC---------CC-hHHHHHHHHHcCCCcEEEeccccchhhhh---------cccchhhhh
Q 013784 58 KAEMVARQYLPPWFSVAPMMD---------WT-DNHYRTLARLISKHAWLYTEMLAAETIIY---------QQGNLDRFL 118 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag---------vt-d~~fr~~~~~~Gg~gl~~temv~~~~l~~---------~~~~~~~~~ 118 (436)
+|++||+++|+|||++|||.. .| +....++.+++ |+||++||.+.+..-.. ...++..+.
T Consensus 9 ~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~k 87 (379)
T 3aty_A 9 RPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWR 87 (379)
T ss_dssp SCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHHH
T ss_pred CCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHHHHHHHH
Confidence 799999999999999999963 25 67778887666 48999999877653221 111222222
Q ss_pred c----cCCCCCcEEEEEcC-------------------------------------------------------------
Q 013784 119 A----FSPEQHPIVLQIGG------------------------------------------------------------- 133 (436)
Q Consensus 119 ~----~~~~~~pi~vQL~g------------------------------------------------------------- 133 (436)
+ +|..+.++++||++
T Consensus 88 ~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~~e 167 (379)
T 3aty_A 88 KIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDE 167 (379)
T ss_dssp HHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCHHH
T ss_pred HHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCHHH
Confidence 2 46667778888742
Q ss_pred ---CCHHHHHHHHHHHH-HCCCCEEEecCCC---------CCCcccc-CCCccc-cccCChHHHHHHHHHHhhccC-CcE
Q 013784 134 ---SNLDNLAKATELAN-AYNYDEINLNCGC---------PSPKVAG-HGCFGV-SLMLDPKFVGEAMSVIAANTN-VPV 197 (436)
Q Consensus 134 ---~~p~~~~~aA~~~~-~~G~d~IdLN~gc---------P~~~v~r-~g~yG~-~Ll~~~~~l~eiv~av~~~~~-iPv 197 (436)
..+++|+++|+++. ++|||+||||++| |.. +.| +|+||+ +++++++++.|++++|+++++ .||
T Consensus 168 I~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~-N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v 246 (379)
T 3aty_A 168 VRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESS-NKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRV 246 (379)
T ss_dssp HHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTT-CCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred HhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCC-CccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeE
Confidence 01256789999999 9999999999997 663 577 899999 999999999999999999886 489
Q ss_pred EEEeccC-C----CCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 198 SVKCRIG-V----DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 198 svKiR~G-~----~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
.+|++.. + ....+.++..+ +++.+++.|+|+|++|+++.. . ...+ .+ +..+++.+ ++|||+
T Consensus 247 ~vRis~~~~~~~~~~~~~~~~~~~-la~~l~~~Gvd~i~v~~~~~~--~------~~~~---~~-~~~ir~~~-~iPvi~ 312 (379)
T 3aty_A 247 GLRISPLNGVHGMIDSNPEALTKH-LCKKIEPLSLAYLHYLRGDMV--N------QQIG---DV-VAWVRGSY-SGVKIS 312 (379)
T ss_dssp EEEECTTCCGGGCCCSCHHHHHHH-HHHHHGGGCCSEEEEECSCTT--S------CCCC---CH-HHHHHTTC-CSCEEE
T ss_pred EEEECcccccccCCCCCCHHHHHH-HHHHHHHhCCCEEEEcCCCcC--C------CCcc---HH-HHHHHHHC-CCcEEE
Confidence 9999983 2 12223445444 467788899999999987521 1 0111 24 55666655 899999
Q ss_pred eCCCCCHHHHHHHHHcC-CCeeeehHHHHhCCcchhh
Q 013784 273 NGGINTVDEVNAALRKG-AHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 273 nGgI~s~~da~~~l~~G-ad~VmiGRa~l~~P~lf~~ 308 (436)
+||| +++++.++++.| ||+||+||+++.||||+.+
T Consensus 313 ~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k 348 (379)
T 3aty_A 313 NLRY-DFEEADQQIREGKVDAVAFGAKFIANPDLVER 348 (379)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred ECCC-CHHHHHHHHHcCCCeEEEecHHHHhCcHHHHH
Confidence 9999 999999999965 9999999999999999744
No 23
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.97 E-value=2.5e-29 Score=252.96 Aligned_cols=232 Identities=15% Similarity=0.114 Sum_probs=178.0
Q ss_pred cccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh-------------------cccchhhhh--
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY-------------------QQGNLDRFL-- 118 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~-------------------~~~~~~~~~-- 118 (436)
.++.++.++|||++|.=..-.+..+-..+...| .|.+.+.-++.++-.. ++...+.++
T Consensus 39 ~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 117 (354)
T 4ef8_A 39 VNLLNNTFANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAY 117 (354)
T ss_dssp EEETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHH
T ss_pred eEECCEECCCCCEeccCCCCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHH
Confidence 458899999999999766655666655555664 8888887776542110 111122222
Q ss_pred --ccC-CCCCcEEEEEcCCCHHHHHHHHHHHH---HCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc
Q 013784 119 --AFS-PEQHPIVLQIGGSNLDNLAKATELAN---AYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN 192 (436)
Q Consensus 119 --~~~-~~~~pi~vQL~g~~p~~~~~aA~~~~---~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~ 192 (436)
+.. ..+.|+++||+|+++++|.++|+.++ +.|+|+||||++||+.+ + |..|+.+++.+.+++++|++.
T Consensus 118 l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~-----g-g~~l~~~~e~~~~il~av~~~ 191 (354)
T 4ef8_A 118 AAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----G-KPQVAYDFDAMRQCLTAVSEV 191 (354)
T ss_dssp HHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST-----T-SCCGGGSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC-----C-chhhccCHHHHHHHHHHHHHh
Confidence 222 23689999999999999999999988 56899999999999963 2 678889999999999999999
Q ss_pred cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCC-ccEEEEc------------cCcc------cccCCCCCCCCCCCCc
Q 013784 193 TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIH------------SRKA------LLNGISPAENRTIPPL 253 (436)
Q Consensus 193 ~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~G-vd~I~vh------------grt~------~~~G~~~~~~~~i~~~ 253 (436)
+++||+||+|++++. +++.+ ++++++++| +|+|+++ +|+. ..+|+++ ..+.+.
T Consensus 192 ~~~PV~vKi~p~~d~----~~~~~-~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG---~~i~p~ 263 (354)
T 4ef8_A 192 YPHSFGVKMPPYFDF----AHFDA-AAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG---RYVLPT 263 (354)
T ss_dssp CCSCEEEEECCCCSH----HHHHH-HHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG---GGGHHH
T ss_pred hCCCeEEEecCCCCH----HHHHH-HHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCC---CCCchH
Confidence 999999999998742 23433 244566788 9999864 3332 1234443 234566
Q ss_pred cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC-Ccch
Q 013784 254 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN-PWYT 306 (436)
Q Consensus 254 ~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~-P~lf 306 (436)
.|++++++++..+++|||++|||.|++|+.+++++|||+|||||+++.+ ||+|
T Consensus 264 a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~ 317 (354)
T 4ef8_A 264 ALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIF 317 (354)
T ss_dssp HHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHH
Confidence 7999999988755899999999999999999999999999999999999 9986
No 24
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.96 E-value=2.9e-28 Score=244.54 Aligned_cols=232 Identities=14% Similarity=0.174 Sum_probs=173.6
Q ss_pred cccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh-------------------cccchhhhh--
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY-------------------QQGNLDRFL-- 118 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~-------------------~~~~~~~~~-- 118 (436)
.++.++.++|||++|.=..-.+.++...+...| .|.+.+..++.++-.. ++...+.++
T Consensus 40 ~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 118 (345)
T 3oix_A 40 TTIGSFDFDNCLMNAAGVYCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDY 118 (345)
T ss_dssp EEETTEEESCSEEECTTSSCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHH
T ss_pred eEECCEECCCCCEEcCCCCCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHH
Confidence 458999999999999444345667777777775 8999999888763110 111122221
Q ss_pred --cc--CCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC-EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 119 --AF--SPEQHPIVLQIGGSNLDNLAKATELANAYNYD-EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 119 --~~--~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d-~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
.. ...+.|+++||+|+++++|+++|+.++++|++ +||||++||+.+ | |..|+.+++.+.+++++|++.+
T Consensus 119 l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G--~~~l~~~~e~l~~il~av~~~~ 192 (345)
T 3oix_A 119 VTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G--XPQIAYDFETTDQILSEVFTYF 192 (345)
T ss_dssp HHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T--CCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C--chhhcCCHHHHHHHHHHHHHHh
Confidence 11 24578999999999999999999999999987 999999999964 2 6778899999999999999999
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEE----------EEccCccc------ccCCCCCCCCCCCCccHHH
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF----------IIHSRKAL------LNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I----------~vhgrt~~------~~G~~~~~~~~i~~~~~~~ 257 (436)
++||+||+|+++ +..++++.+ ..+...|++.| ++|.|+.. .+|+++ ..+.+..+++
T Consensus 193 ~~PV~vKi~p~~----~~~~~a~~~-~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG---~ai~p~a~~~ 264 (345)
T 3oix_A 193 TKPLGIKLPPYF----DIVHFDQAA-AIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGG---DYVKPTALAN 264 (345)
T ss_dssp CSCEEEEECCCC----CHHHHHHHH-HHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEE---GGGHHHHHHH
T ss_pred CCCeEEEECCCC----CHHHHHHHH-HHhCCCceEEEEeecccccceeeccCccccccccccCCcCC---ccccHHHHHH
Confidence 999999999974 234444322 12223344433 35655432 234443 2344555888
Q ss_pred HHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH-HHhCCcch
Q 013784 258 YYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRA-AYQNPWYT 306 (436)
Q Consensus 258 v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa-~l~~P~lf 306 (436)
++++++.+. ++|||++|||.|++|+.+++++|||+|||||+ ++.+||+|
T Consensus 265 v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~~gP~~~ 315 (345)
T 3oix_A 265 VHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQEGPQIF 315 (345)
T ss_dssp HHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHH
T ss_pred HHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHhcChHHH
Confidence 989888764 79999999999999999999999999999999 89999986
No 25
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.96 E-value=1.8e-28 Score=245.78 Aligned_cols=231 Identities=14% Similarity=0.113 Sum_probs=171.4
Q ss_pred CccccCCeecCCcEEEcCCCCCChH-HHHHHHHHcCCCcEEEeccccchhhhhc---------------------ccchh
Q 013784 58 KAEMVARQYLPPWFSVAPMMDWTDN-HYRTLARLISKHAWLYTEMLAAETIIYQ---------------------QGNLD 115 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagvtd~-~fr~~~~~~Gg~gl~~temv~~~~l~~~---------------------~~~~~ 115 (436)
.|.++++++++|||++|++ +++. .++..+.+. |+|+++|++++++....+ +...+
T Consensus 45 l~~~i~g~~l~npi~~aag--~~~~~~~~~~~a~~-G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~ 121 (336)
T 1f76_A 45 KPVNCMGLTFKNPLGLAAG--LDKDGECIDALGAM-GFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVD 121 (336)
T ss_dssp CCEEETTEEESSSEEECTT--SSTTCCCHHHHHHT-TCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHH
T ss_pred CCeEECCEEcCCCcEeCcc--cCCcHHHHHHHHHc-CccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHH
Confidence 4677999999999999965 3433 366666666 599999999987642110 01112
Q ss_pred hhhc---cCCCCCcEEEEEcCCC-------HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHH
Q 013784 116 RFLA---FSPEQHPIVLQIGGSN-------LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEA 185 (436)
Q Consensus 116 ~~~~---~~~~~~pi~vQL~g~~-------p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~ei 185 (436)
.+++ ....+.|+++||++++ +++|+++++++.+ |+|+|+||++||..+ |...+++++++.++
T Consensus 122 ~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~-------g~~~~~~~~~~~~i 193 (336)
T 1f76_A 122 NLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTP-------GLRTLQYGEALDDL 193 (336)
T ss_dssp HHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSST-------TGGGGGSHHHHHHH
T ss_pred HHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCC-------CcccccCHHHHHHH
Confidence 2221 1223569999999998 8999999999987 999999999999843 34456789999999
Q ss_pred HHHHhhcc---------CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccccc------------CCCC
Q 013784 186 MSVIAANT---------NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLN------------GISP 244 (436)
Q Consensus 186 v~av~~~~---------~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~------------G~~~ 244 (436)
+++|++.+ ++||.+|++.+++. +++.+ +++.++++|+|+|++|+++.... |.++
T Consensus 194 l~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~----~~~~~-~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g 268 (336)
T 1f76_A 194 LTAIKNKQNDLQAMHHKYVPIAVKIAPDLSE----EELIQ-VADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG 268 (336)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEEEECCSCCCH----HHHHH-HHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEE
T ss_pred HHHHHHHHHhhhhcccccCceEEEecCCCCH----HHHHH-HHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCC
Confidence 99999987 89999999987643 23333 35677889999999998763111 1110
Q ss_pred CCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh-CCcchh
Q 013784 245 AENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ-NPWYTL 307 (436)
Q Consensus 245 ~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~-~P~lf~ 307 (436)
..+.+..++++.++++.+. ++|||++|||.|++|+.++++.|||+||+||+++. +||+|.
T Consensus 269 ---~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~ 330 (336)
T 1f76_A 269 ---RPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIK 330 (336)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHH
T ss_pred ---chhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHH
Confidence 0011223566777766543 79999999999999999999999999999999998 999964
No 26
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.95 E-value=2.1e-27 Score=240.44 Aligned_cols=229 Identities=13% Similarity=0.130 Sum_probs=170.2
Q ss_pred cccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh---------------------cccchhhhh
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY---------------------QQGNLDRFL 118 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~---------------------~~~~~~~~~ 118 (436)
.++.++.++|||++|.=.+-+...++.+.. . |.|.+.+.-++++.-.- ++...+.++
T Consensus 52 ~~~~Gl~~~NPvglAaG~~~~~~~~~~~~~-~-g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~ 129 (367)
T 3zwt_A 52 VRVLGHKFRNPVGIAAGFDKHGEAVDGLYK-M-GFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVE 129 (367)
T ss_dssp EEETTEEESSSEEECTTSSTTSSSHHHHHH-T-TCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHH
T ss_pred EEECCEEcCCCCEeCCCcCCCHHHHHHHHh-c-CcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHH
Confidence 458999999999999543333445666654 4 58999988887652110 111112211
Q ss_pred c-cC----------CCCCcEEEEEcCC-----CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHH
Q 013784 119 A-FS----------PEQHPIVLQIGGS-----NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFV 182 (436)
Q Consensus 119 ~-~~----------~~~~pi~vQL~g~-----~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l 182 (436)
+ +. ..+.|+++||+++ ++++|+++++.+.+. +|+||||+|||+.+ |..++.+++.+
T Consensus 130 ~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~-ad~ielNisCPn~~-------G~~~l~~~~~l 201 (367)
T 3zwt_A 130 HRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPL-ADYLVVNVSSPNTA-------GLRSLQGKAEL 201 (367)
T ss_dssp HHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCTTST-------TGGGGGSHHHH
T ss_pred HHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhh-CCEEEEECCCCCCC-------CccccCCHHHH
Confidence 1 11 1257999999997 689999999999874 79999999999963 44578999999
Q ss_pred HHHHHHHhhc-------cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccc------------ccCCC
Q 013784 183 GEAMSVIAAN-------TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL------------LNGIS 243 (436)
Q Consensus 183 ~eiv~av~~~-------~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~------------~~G~~ 243 (436)
.+++++|++. .++||+||++.++++ +++.+ +++.++++|+|+|++|+++.. .+|++
T Consensus 202 ~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~----~~~~~-ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlS 276 (367)
T 3zwt_A 202 RRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS----QDKED-IASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLS 276 (367)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH----HHHHH-HHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEE
T ss_pred HHHHHHHHHHHhhccccCCceEEEEeCCCCCH----HHHHH-HHHHHHHcCCCEEEEeCCCcccccccccccccccCCcC
Confidence 9999999764 689999999998764 23333 356678899999999988731 12222
Q ss_pred CCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHH-hCCcch
Q 013784 244 PAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY-QNPWYT 306 (436)
Q Consensus 244 ~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l-~~P~lf 306 (436)
+ ..+.+..++.++++++.+. ++|||++|||.|++|+.+++++|||+||+||+++ .+||+|
T Consensus 277 G---~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~ 338 (367)
T 3zwt_A 277 G---KPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVV 338 (367)
T ss_dssp E---GGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHH
T ss_pred C---cccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHH
Confidence 2 1233445788888888764 7999999999999999999999999999999995 679986
No 27
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.95 E-value=8.6e-28 Score=237.57 Aligned_cols=228 Identities=21% Similarity=0.290 Sum_probs=167.3
Q ss_pred ccccCCeecCCcEEEcC-CCCCChHHHHHHHHHcCCCcEEEecccc---------------------chhhhhcccchhh
Q 013784 59 AEMVARQYLPPWFSVAP-MMDWTDNHYRTLARLISKHAWLYTEMLA---------------------AETIIYQQGNLDR 116 (436)
Q Consensus 59 p~~i~~l~l~n~iilAP-Magvtd~~fr~~~~~~Gg~gl~~temv~---------------------~~~l~~~~~~~~~ 116 (436)
|.+++++.++|||++|| |.+.++ +++.++.. +|.|.+.|+-+. ..++.+. ..+.
T Consensus 8 ~~~~~g~~l~npi~~aag~~~~~~-~~~~~~~~-~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~--~~~~ 83 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFGFGE-EYAKYYDL-NKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNP--GLEV 83 (311)
T ss_dssp CEEETTEEESSSEEECTTSSTTST-TGGGTSCG-GGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBC--CHHH
T ss_pred ceEECCEECCCCcEECCCCCCCCH-HHHHHHHh-cCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCc--CHHH
Confidence 56689999999999999 988776 45544432 357777766443 2222211 1111
Q ss_pred h----h-ccC--CCCCcEEEEEcCCCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHH
Q 013784 117 F----L-AFS--PEQHPIVLQIGGSNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSV 188 (436)
Q Consensus 117 ~----~-~~~--~~~~pi~vQL~g~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~a 188 (436)
+ + .+. ..+.|+++||++++++++.++++.+.+ .|+|+|+||++||..+ .+ |..+..+++++.+++++
T Consensus 84 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~-~g----~~~~g~~~~~~~eii~~ 158 (311)
T 1ep3_A 84 IMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVK-HG----GQAFGTDPEVAAALVKA 158 (311)
T ss_dssp HHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGG-GT----TEEGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCC-Cc----hhhhcCCHHHHHHHHHH
Confidence 1 1 122 237899999999999999999999998 8999999999999842 22 45555799999999999
Q ss_pred HhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCc---------cc------ccCCCCCCCCCCCCc
Q 013784 189 IAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK---------AL------LNGISPAENRTIPPL 253 (436)
Q Consensus 189 v~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt---------~~------~~G~~~~~~~~i~~~ 253 (436)
+++.+++||.+|++.++.+ ..++ ++.++++|+|+|++++.. .. .+|.++. ...+.
T Consensus 159 v~~~~~~pv~vk~~~~~~~---~~~~----a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~---~~~~~ 228 (311)
T 1ep3_A 159 CKAVSKVPLYVKLSPNVTD---IVPI----AKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP---AIKPV 228 (311)
T ss_dssp HHHHCSSCEEEEECSCSSC---SHHH----HHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG---GGHHH
T ss_pred HHHhcCCCEEEEECCChHH---HHHH----HHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc---cchHH
Confidence 9998899999999987753 2233 345678999999995432 10 0111110 01111
Q ss_pred cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 254 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 254 ~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
.++++.++++.. ++|||++|||.|++|+.++++.|||+||+||+++.+|+++
T Consensus 229 ~~~~i~~i~~~~-~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~~ 280 (311)
T 1ep3_A 229 ALKLIHQVAQDV-DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPFVC 280 (311)
T ss_dssp HHHHHHHHHTTC-SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTHH
T ss_pred HHHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHHH
Confidence 246777777765 8999999999999999999999999999999999999985
No 28
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.94 E-value=9.4e-27 Score=235.32 Aligned_cols=239 Identities=15% Similarity=0.086 Sum_probs=171.1
Q ss_pred CccccCCeecCCcEEEcCCCC--------CChHHHHHHHHHcCCCcEEEeccccchhhhhc---------ccchhhhhc-
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WTDNHYRTLARLISKHAWLYTEMLAAETIIYQ---------QGNLDRFLA- 119 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~---------~~~~~~~~~- 119 (436)
+|++||+++|||||++|||.. +|+....++.++++ .|+++||.+.+..-... ...+..+.+
T Consensus 6 ~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l 84 (358)
T 4a3u_A 6 DPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPI 84 (358)
T ss_dssp SCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHH
T ss_pred CCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHHHHHHH
Confidence 799999999999999999963 57778888876665 49999997766532211 112222222
Q ss_pred ---cCCCCCcEEEEEcCCC-----------------------------------------------HHHHHHHHHHHHHC
Q 013784 120 ---FSPEQHPIVLQIGGSN-----------------------------------------------LDNLAKATELANAY 149 (436)
Q Consensus 120 ---~~~~~~pi~vQL~g~~-----------------------------------------------p~~~~~aA~~~~~~ 149 (436)
+|..+.++++||++.. .++|++||++++++
T Consensus 85 ~~avh~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~A 164 (358)
T 4a3u_A 85 TQAVHDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKA 164 (358)
T ss_dssp HHHHHHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 5778899999996421 26799999999999
Q ss_pred CCCEEEecCC---------CCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccCCC-----CCCcHHHH
Q 013784 150 NYDEINLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVD-----DHDSYNQL 214 (436)
Q Consensus 150 G~d~IdLN~g---------cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G~~-----~~~~~~~~ 214 (436)
|||+||||++ +|. .|.|+|+||+++.+|.+++.||+++||++++ -+|.+|+...-. +.+..++.
T Consensus 165 GFDgVEIH~ahGYLl~QFLSp~-tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~ 243 (358)
T 4a3u_A 165 GFDGVQIHAANGYLIDEFIRDS-TNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVF 243 (358)
T ss_dssp TCSEEEEEECTTSHHHHHHSTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHH
T ss_pred CCCeEeecccCCCcHHhceecc-cCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHH
Confidence 9999999987 677 5789999999999999999999999999875 457777654211 11122232
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCee
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHV 293 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~V 293 (436)
.. +++.+++.|++.+.++..... +..+. ..... + ...+++. ...||+ .|++.+++.++++++.| ||.|
T Consensus 244 ~~-~~~~~~~~~~~~i~~~~~~~~--~~~~~--~~~~~--~--a~~ik~~-~~~~v~-~~g~~~~~~ae~~l~~G~aD~V 312 (358)
T 4a3u_A 244 IP-AAKMLSDLDIAFLGMREGAVD--GTFGK--TDQPK--L--SPEIRKV-FKPPLV-LNQDYTFETAQAALDSGVADAI 312 (358)
T ss_dssp HH-HHHHHHHHTCSEEEEECCBTT--CSSSB--CSSCC--C--HHHHHHH-CCSCEE-EESSCCHHHHHHHHHHTSCSEE
T ss_pred HH-HHHhhhccCcccccccccccc--Ccccc--cccHH--H--HHHHHHh-cCCcEE-EeCCCCHHHHHHHHHcCCceEe
Confidence 32 456677889999999754321 11000 01111 1 2233333 366666 56678999999999966 9999
Q ss_pred eehHHHHhCCcchhhh
Q 013784 294 MVGRAAYQNPWYTLGH 309 (436)
Q Consensus 294 miGRa~l~~P~lf~~~ 309 (436)
.+||+++.||+|+.+.
T Consensus 313 ~~gR~~ladPdlp~k~ 328 (358)
T 4a3u_A 313 SFGRPFIGNPDLPRRF 328 (358)
T ss_dssp EESHHHHHCTTHHHHH
T ss_pred HhhHHHHhChhHHHHH
Confidence 9999999999997543
No 29
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.94 E-value=8.3e-27 Score=240.67 Aligned_cols=230 Identities=14% Similarity=0.156 Sum_probs=172.5
Q ss_pred ccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh----------c-----------ccchhhh
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY----------Q-----------QGNLDRF 117 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~----------~-----------~~~~~~~ 117 (436)
|.+++++.++|||++|++..-....++.+ ... |.|++.+++++++.-.. . +...+.+
T Consensus 83 ~~~i~Gl~~~NPvglAAG~dk~~~~~~~l-~~~-GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~ 160 (443)
T 1tv5_A 83 CTNIKHLDFINPFGVAAGFDKNGVCIDSI-LKL-GFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKV 160 (443)
T ss_dssp CEEETTEEESSSEEECTTTTTTCSSHHHH-HTT-TCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHH
T ss_pred CeEECCEEeCCCcEECCcccCccHHHHHH-Hhc-CCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHH
Confidence 66799999999999998776555566665 334 69999999999753210 0 1111111
Q ss_pred hc----cCC--------CCCcEEEEEcCCC-----HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChH
Q 013784 118 LA----FSP--------EQHPIVLQIGGSN-----LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK 180 (436)
Q Consensus 118 ~~----~~~--------~~~pi~vQL~g~~-----p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~ 180 (436)
.+ ... ...|+++||++++ +++++++++.+.+ ++|+||||++||+.+ |..++++++
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~-------Glr~lq~~~ 232 (443)
T 1tv5_A 161 TENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTP-------GLRDNQEAG 232 (443)
T ss_dssp HHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST-------TGGGGGSHH
T ss_pred HHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCc-------ccccccCHH
Confidence 11 000 2468999999998 8999999999988 699999999999963 677889999
Q ss_pred HHHHHHHHHhhc--------------------------------------------------cCCc-EEEEeccCCCCCC
Q 013784 181 FVGEAMSVIAAN--------------------------------------------------TNVP-VSVKCRIGVDDHD 209 (436)
Q Consensus 181 ~l~eiv~av~~~--------------------------------------------------~~iP-vsvKiR~G~~~~~ 209 (436)
.+.+++++|++. .++| |.||++.++++
T Consensus 233 ~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~-- 310 (443)
T 1tv5_A 233 KLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQ-- 310 (443)
T ss_dssp HHHHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCH--
T ss_pred HHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCH--
Confidence 999999999863 3689 99999998753
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCcccc----------cCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCC
Q 013784 210 SYNQLCDFIYKVSSLSPTRHFIIHSRKALL----------NGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINT 278 (436)
Q Consensus 210 ~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~----------~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s 278 (436)
+++.+ +++.++++|+|+|++|+++... +|.++. .+.+..+++++++++.+. ++|||++|||.|
T Consensus 311 --ed~~~-iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~---~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s 384 (443)
T 1tv5_A 311 --EQKKE-IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGA---KLKDISTKFICEMYNYTNKQIPIIASGGIFS 384 (443)
T ss_dssp --HHHHH-HHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEH---HHHHHHHHHHHHHHHHTTTCSCEEEESSCCS
T ss_pred --HHHHH-HHHHHHHcCCCEEEEECCCcccccccccccccCCcCCC---cchHHHHHHHHHHHHHcCCCCcEEEECCCCC
Confidence 23333 4567788999999999987521 111110 011223677888877653 799999999999
Q ss_pred HHHHHHHHHcCCCeeeehHHHHh-CCcch
Q 013784 279 VDEVNAALRKGAHHVMVGRAAYQ-NPWYT 306 (436)
Q Consensus 279 ~~da~~~l~~Gad~VmiGRa~l~-~P~lf 306 (436)
++|+.+++++|||+||+||+++. +||++
T Consensus 385 ~~DA~e~l~aGAd~Vqigrall~~gP~l~ 413 (443)
T 1tv5_A 385 GLDALEKIEAGASVCQLYSCLVFNGMKSA 413 (443)
T ss_dssp HHHHHHHHHTTEEEEEESHHHHHHGGGHH
T ss_pred HHHHHHHHHcCCCEEEEcHHHHhcChHHH
Confidence 99999999999999999999886 99986
No 30
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.94 E-value=2.2e-26 Score=235.87 Aligned_cols=244 Identities=11% Similarity=0.017 Sum_probs=163.8
Q ss_pred CccccCCeecCCcEEEcCCCC--------CC--hHHHHHHH-HHcCCCcEEEeccccchhhhhc---------ccchhhh
Q 013784 58 KAEMVARQYLPPWFSVAPMMD--------WT--DNHYRTLA-RLISKHAWLYTEMLAAETIIYQ---------QGNLDRF 117 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMag--------vt--d~~fr~~~-~~~Gg~gl~~temv~~~~l~~~---------~~~~~~~ 117 (436)
+|++||+++|+|||++|||.. ++ +.+.+++. +..||+|+++||.+.+..-... ...+..+
T Consensus 19 ~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~ 98 (400)
T 4gbu_A 19 KPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEW 98 (400)
T ss_dssp SCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHH
T ss_pred CCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHH
Confidence 899999999999999999963 33 45677776 5568899999998766533221 1122222
Q ss_pred hc----cCCCCCcEEEEEcCCC--------------------------------------------------HHHHHHHH
Q 013784 118 LA----FSPEQHPIVLQIGGSN--------------------------------------------------LDNLAKAT 143 (436)
Q Consensus 118 ~~----~~~~~~pi~vQL~g~~--------------------------------------------------p~~~~~aA 143 (436)
.+ +|..+..+++||++.. .++|++||
T Consensus 99 k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA 178 (400)
T 4gbu_A 99 TKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAA 178 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 22 5778899999997421 16799999
Q ss_pred HHHHHCCCCEEEecCC---------CCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccC-CC------
Q 013784 144 ELANAYNYDEINLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG-VD------ 206 (436)
Q Consensus 144 ~~~~~~G~d~IdLN~g---------cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G-~~------ 206 (436)
++++++|||+||||++ +|. .|.|+|+||+++.||.+++.||+++||++++ .||.+|+... +.
T Consensus 179 ~rA~~AGFDgVEIH~AhGYLl~QFLSp~-tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~ 257 (400)
T 4gbu_A 179 KNSIAAGADGVEIHSANGYLLNQFLDPH-SNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGG 257 (400)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTT-TCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGG
T ss_pred HHHHhcCcCeeeecccccchHHheecCc-CCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCcc
Confidence 9999999999999987 677 5789999999999999999999999999874 5788887641 11
Q ss_pred -CCCcHHHHHHHHHHHhhc---CC--ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 207 -DHDSYNQLCDFIYKVSSL---SP--TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 207 -~~~~~~~~~~~la~~~e~---~G--vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
+.....+..+. +..++. .| .+.+.+..................... . +.+++..++|||++|+|.+..
T Consensus 258 ~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~ir~~~~~pvi~~G~~~~~~ 331 (400)
T 4gbu_A 258 AETGIVAQYAYV-AGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGS-N----DFVYSIWKGPVIRAGNFALHP 331 (400)
T ss_dssp GSTTHHHHHHHH-HHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCC-S----THHHHHCCSCEEEESSCTTCH
T ss_pred chhhhHHHHHHH-HHHHHHhhccCccccceeeecccCCCcccccccchhhhHH-H----HHHHHHhCCCEEEeCCCCChH
Confidence 11112222222 222222 22 345544322110000000000011110 1 222333489999999999877
Q ss_pred HHHHHHH-cCCCeeeehHHHHhCCcchhh
Q 013784 281 EVNAALR-KGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 281 da~~~l~-~Gad~VmiGRa~l~~P~lf~~ 308 (436)
++.+.+. .+||.|.+||++|.||+|..+
T Consensus 332 ~~~~~~~~~~aDlV~~gR~~iadPdl~~k 360 (400)
T 4gbu_A 332 EVVREEVKDKRTLIGYGRFFISNPDLVDR 360 (400)
T ss_dssp HHHHHHTTSTTEEEECCHHHHHCTTHHHH
T ss_pred HHHHHHHcCCCeEhHHHHHHHHCcHHHHH
Confidence 7666664 789999999999999999754
No 31
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.93 E-value=1.3e-25 Score=254.59 Aligned_cols=232 Identities=18% Similarity=0.214 Sum_probs=173.8
Q ss_pred ccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhh--hcc-------------------------
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETII--YQQ------------------------- 111 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~--~~~------------------------- 111 (436)
..++.++.++|||++|||.+.++.+++..+...| .|++.++.++.+.-. ...
T Consensus 534 s~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~ 612 (1025)
T 1gte_A 534 SVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIEL 612 (1025)
T ss_dssp CEEETTEEESSSEEECSSGGGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCC
T ss_pred eeeeccccccCcccccCCCCCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCCchhheeeecc
Confidence 4557799999999999999999999988887775 789987777653211 000
Q ss_pred ---cc-------hhhhhccCCCCCcEEEEE-cCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChH
Q 013784 112 ---GN-------LDRFLAFSPEQHPIVLQI-GGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK 180 (436)
Q Consensus 112 ---~~-------~~~~~~~~~~~~pi~vQL-~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~ 180 (436)
.. +.++.+.. .+.|+++|+ +|++++++.+++++++++|+|+|+||++||.. .+++.||++++++++
T Consensus 613 ~~~~~~~~~~~~i~~~~~~~-~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~--~~~~~~G~~~~~~~~ 689 (1025)
T 1gte_A 613 ISEKTAAYWCQSVTELKADF-PDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG--MGERGMGLACGQDPE 689 (1025)
T ss_dssp SCSSCHHHHHHHHHHHHHHC-TTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC--CC-----SBGGGCHH
T ss_pred ccchhHHHHHHHHHHHHhcC-CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC--CCCCCcccccccCHH
Confidence 00 11111111 257899988 68899999999999999999999999999996 334568999999999
Q ss_pred HHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE----------------------ccCccc
Q 013784 181 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII----------------------HSRKAL 238 (436)
Q Consensus 181 ~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v----------------------hgrt~~ 238 (436)
++.++++++++.+++||.+|++.+..+ ..++ ++.++++|+|+|++ |||+.
T Consensus 690 ~~~~iv~~v~~~~~~Pv~vK~~~~~~~---~~~~----a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~- 761 (1025)
T 1gte_A 690 LVRNICRWVRQAVQIPFFAKLTPNVTD---IVSI----ARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTT- 761 (1025)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCSSC---HHHH----HHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBC-
T ss_pred HHHHHHHHHHHhhCCceEEEeCCChHH---HHHH----HHHHHHcCCCEEEEecccccccccccccccccccccccccc-
Confidence 999999999999999999999986542 3333 45567899999999 44432
Q ss_pred ccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 239 LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 239 ~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
.+|.++. .+.+..+++++++++.++++|||++|||.|++|+.+++++|||+|||||+++.+||.
T Consensus 762 ~gg~sg~---~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~~~~~ 825 (1025)
T 1gte_A 762 YGGVSGT---AIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFT 825 (1025)
T ss_dssp CEEEESG---GGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTT
T ss_pred CCCCCcc---cchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHHHcCCCEEEEeeccccCCcc
Confidence 1122211 111222567888887766899999999999999999999999999999999986664
No 32
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.93 E-value=8.7e-26 Score=230.34 Aligned_cols=230 Identities=15% Similarity=0.176 Sum_probs=164.5
Q ss_pred ccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhh--------h-------------cccchhhh
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETII--------Y-------------QQGNLDRF 117 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~--------~-------------~~~~~~~~ 117 (436)
+.++.++.++|||.+|.=..-....++.+. ++| .|.+.+.-++++.-. + ++...+.+
T Consensus 85 ~v~~~Gl~f~NPvglAAG~dk~~~~~~~l~-~lG-fG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~ 162 (415)
T 3i65_A 85 CTNIKHLDFINPFGVAAGFDKNGVCIDSIL-KLG-FSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKV 162 (415)
T ss_dssp CEEETTEEESSSEEECTTSSTTCSSHHHHH-TTT-CSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHH
T ss_pred cEEECCEECCCCCEECCCCCCCHHHHHHHH-HcC-CCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHH
Confidence 345889999999999975543334455444 454 788888877764211 0 11111111
Q ss_pred h----ccC---C-----CCCcEEEEEcCCC-----HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChH
Q 013784 118 L----AFS---P-----EQHPIVLQIGGSN-----LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK 180 (436)
Q Consensus 118 ~----~~~---~-----~~~pi~vQL~g~~-----p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~ 180 (436)
+ ... + ...|+++||++++ +++|.++++.+.++ +|.||||++||+.+ |..++++++
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~-------Gl~~lq~~~ 234 (415)
T 3i65_A 163 TENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP-------GLRDNQEAG 234 (415)
T ss_dssp HHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC---------------CCH
T ss_pred HHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC-------CcccccCHH
Confidence 1 110 1 2457999999998 89999999999987 89999999999963 677889999
Q ss_pred HHHHHHHHHhhc--------------------cCCc-EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccc
Q 013784 181 FVGEAMSVIAAN--------------------TNVP-VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALL 239 (436)
Q Consensus 181 ~l~eiv~av~~~--------------------~~iP-vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~ 239 (436)
.+.+++++|++. ..+| |.||++.++++ + ++.+ +++.++++|+|+|++|+++...
T Consensus 235 ~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~-~---~i~~-iA~~a~~aGaDgIiv~Ntt~~r 309 (415)
T 3i65_A 235 KLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQ-E---QKKE-IADVLLETNIDGMIISNTTTQI 309 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCH-H---HHHH-HHHHHHHHTCSEEEECCCBSCC
T ss_pred HHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCH-H---HHHH-HHHHHHHcCCcEEEEeCCCccc
Confidence 999999999875 3689 99999998764 2 2333 4567788999999999987421
Q ss_pred ----------cCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC-Ccch
Q 013784 240 ----------NGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN-PWYT 306 (436)
Q Consensus 240 ----------~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~-P~lf 306 (436)
+|+++ ..+.+..+++++++++.+. ++|||++|||.|++|+.+++++|||+|||||+++.+ ||+|
T Consensus 310 ~dl~~~~~~~GGlSG---~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~ 385 (415)
T 3i65_A 310 NDIKSFENKKGGVSG---AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSA 385 (415)
T ss_dssp CCCGGGTTCCSEEEE---GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHH
T ss_pred ccccccccccCCcCC---ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHH
Confidence 22322 1222334678888887754 799999999999999999999999999999999988 9986
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.91 E-value=1.4e-23 Score=212.58 Aligned_cols=252 Identities=15% Similarity=0.116 Sum_probs=176.4
Q ss_pred cccCCeecCCcEEEcCCC--CCC----hHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcC
Q 013784 60 EMVARQYLPPWFSVAPMM--DWT----DNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG 133 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMa--gvt----d~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g 133 (436)
.++.+..++.||++|||+ |.+ +.+++++|+++| ..+++++|.+ ..+.. +.. .. .+.|+.+||++
T Consensus 72 t~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G-~~~~~s~~~s-~~le~----v~~---~~-~~~~~~~QLy~ 141 (368)
T 2nli_A 72 TEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFG-TIMSISAYSG-ATFEE----ISE---GL-NGGPRWFQIYM 141 (368)
T ss_dssp EEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-CCEEECTTCS-SCHHH----HHH---HH-TTCCEEEEECC
T ss_pred eEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcC-CCEEeechHh-HHHHH----HHH---hC-CCCCEEEEEec
Confidence 347899999999999999 766 579999999996 7899999886 22211 111 11 36789999998
Q ss_pred -CCHHHHHHHHHHHHHCCCCEEEecCCCCCCc-----------------ccc----CCCccccc---c--CChHHHHHHH
Q 013784 134 -SNLDNLAKATELANAYNYDEINLNCGCPSPK-----------------VAG----HGCFGVSL---M--LDPKFVGEAM 186 (436)
Q Consensus 134 -~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~-----------------v~r----~g~yG~~L---l--~~~~~l~eiv 186 (436)
++++...+++++++++|++.|+||++||... +.+ ....|+.+ + .++++..+++
T Consensus 142 ~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i 221 (368)
T 2nli_A 142 AKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDI 221 (368)
T ss_dssp BSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHH
Confidence 7889999999999999999999999999721 110 01236654 2 2677788889
Q ss_pred HHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC
Q 013784 187 SVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP 266 (436)
Q Consensus 187 ~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~ 266 (436)
+++++.+++||.+|.- .+.++ ++.++++|+|+|+|++....+ .+ ..+..++.+.++++.+.
T Consensus 222 ~~lr~~~~~PvivK~v------~~~e~-----a~~a~~~Gad~I~vs~~ggr~-----~~---~g~~~~~~l~~v~~~v~ 282 (368)
T 2nli_A 222 EEIAGHSGLPVFVKGI------QHPED-----ADMAIKRGASGIWVSNHGARQ-----LY---EAPGSFDTLPAIAERVN 282 (368)
T ss_dssp HHHHHHSSSCEEEEEE------CSHHH-----HHHHHHTTCSEEEECCGGGTS-----CS---SCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcC------CCHHH-----HHHHHHcCCCEEEEcCCCcCC-----CC---CCCChHHHHHHHHHHhC
Confidence 9999999999999942 12222 345568999999995432110 01 12334788888876654
Q ss_pred -CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHHHhcCCC
Q 013784 267 -DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNN 345 (436)
Q Consensus 267 -~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 345 (436)
++|||++|||.+++|+.+++.+|||+|||||+++... .. .|. ....+.++.+.+.++..+..+|.
T Consensus 283 ~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~------~~---~G~----~gv~~~l~~l~~el~~~m~~~G~- 348 (368)
T 2nli_A 283 KRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGL------AL---GGW----QGAYSVLDYFQKDLTRVMQLTGS- 348 (368)
T ss_dssp TSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHH------HH---HHH----HHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHH------Hh---cCh----HHHHHHHHHHHHHHHHHHHHhCC-
Confidence 6999999999999999999999999999999665321 11 111 12234555555556666667775
Q ss_pred chHHHHHHHH
Q 013784 346 RPHVRDVMKP 355 (436)
Q Consensus 346 ~~~~~~~~k~ 355 (436)
..+..+++.
T Consensus 349 -~~i~~l~~~ 357 (368)
T 2nli_A 349 -QNVEDLKGL 357 (368)
T ss_dssp -SSHHHHHTC
T ss_pred -cCHHHhccc
Confidence 256666654
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.90 E-value=4.4e-23 Score=207.76 Aligned_cols=259 Identities=12% Similarity=0.049 Sum_probs=167.9
Q ss_pred ccccCCeecCCcEEEcCCCCCC-------hHHHHHHHHHcCCCcEEEeccccchhhhhc-ccchhhhhccCCCCCcEEEE
Q 013784 59 AEMVARQYLPPWFSVAPMMDWT-------DNHYRTLARLISKHAWLYTEMLAAETIIYQ-QGNLDRFLAFSPEQHPIVLQ 130 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvt-------d~~fr~~~~~~Gg~gl~~temv~~~~l~~~-~~~~~~~~~~~~~~~pi~vQ 130 (436)
..++.+..+++|+++|||+|++ +.+++.+|.++| .++.++++.+. +... .....++++....+.|+++|
T Consensus 46 ~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G-~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~pv~~~ 122 (349)
T 1p0k_A 46 STKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAG-IPLAVGSQMSA--LKDPSERLSYEIVRKENPNGLIFAN 122 (349)
T ss_dssp CEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHT-CCEECCCCTTT--TTCHHHHHHHHHHHHHCSSSCEEEE
T ss_pred eeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcC-CcEEeccchhc--ccCcccccceehhhhhCCCceeEEe
Confidence 3458899999999999999999 889999999986 78888887664 1110 01111122222357899999
Q ss_pred Ec-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHH--HHHHHHHHhhccCCcEEEEec-cCCC
Q 013784 131 IG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKF--VGEAMSVIAANTNVPVSVKCR-IGVD 206 (436)
Q Consensus 131 L~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~--l~eiv~av~~~~~iPvsvKiR-~G~~ 206 (436)
+. +.+++++.+ .++..|+|+|+||++||..... .. | ++++ +.++++++++.+++||.+|.. .+++
T Consensus 123 i~~~~~~~~~~~---~~~~~gad~i~i~~~~~~~~~~--~~-~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~ 191 (349)
T 1p0k_A 123 LGSEATAAQAKE---AVEMIGANALQIHLNVIQEIVM--PE-G-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS 191 (349)
T ss_dssp EETTCCHHHHHH---HHHHTTCSEEEEEECTTTTC----------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC
T ss_pred ecCCCCHHHHHH---HHHhcCCCeEEecccchhhhcC--CC-C-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC
Confidence 99 788887654 4566899999999999975332 11 2 3443 778899999888999999984 4432
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEE--ccCcccc-----cCCCCC-CCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALL-----NGISPA-ENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 278 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~~-----~G~~~~-~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s 278 (436)
.++ ++.++++|+|+|++ ||++... ....+. ......+..++.+.++.+...++|||++|||.+
T Consensus 192 ----~~~-----a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~ 262 (349)
T 1p0k_A 192 ----KAS-----AGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQD 262 (349)
T ss_dssp ----HHH-----HHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred ----HHH-----HHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 222 33456789999999 7765210 000000 000112234777777777655899999999999
Q ss_pred HHHHHHHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Q 013784 279 VDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNRPHVRDVMKP 355 (436)
Q Consensus 279 ~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~k~ 355 (436)
++|+.++++.|||+|||||+++..+.. .| .....+.++.+.+.++..+..+|. ..+..++++
T Consensus 263 ~~d~~k~l~~GAd~V~iG~~~l~~~~~---------~g----~~~~~~~~~~~~~~l~~~m~~~G~--~~i~el~~~ 324 (349)
T 1p0k_A 263 ALDVAKAIALGASCTGMAGHFLKALTD---------SG----EEGLLEEIQLILEELKLIMTVLGA--RTIADLQKA 324 (349)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHHHHH---------HH----HHHHHHHHHHHHHHHHHHHHHHTC--CBHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEcHHHHHHHhh---------cC----HHHHHHHHHHHHHHHHHHHHHhCC--CCHHHHhhC
Confidence 999999999999999999988765321 01 012234455555555566667775 245555543
No 35
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.88 E-value=3.8e-22 Score=199.63 Aligned_cols=192 Identities=13% Similarity=0.022 Sum_probs=151.9
Q ss_pred eecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHH
Q 013784 65 QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATE 144 (436)
Q Consensus 65 l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~ 144 (436)
+.+++||++|||.|+++..++.++.++||.|++.+++++++.+....+.++++ .+.|+++|++.++++ +.+.++
T Consensus 9 l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-----~~~p~gvnl~~~~~~-~~~~~~ 82 (332)
T 2z6i_A 9 LKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-----TDKPFGVNIMLLSPF-VEDIVD 82 (332)
T ss_dssp HTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-----CCSCEEEEECTTSTT-HHHHHH
T ss_pred hCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEecCCCCC-HHHHHH
Confidence 45899999999999999999999999998999999998888765544444444 468999999997765 667888
Q ss_pred HHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhc
Q 013784 145 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL 224 (436)
Q Consensus 145 ~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~ 224 (436)
.+.+.|+|+|++|.|||.. +++.+++ .++||.+|+. +.++ ++.+++
T Consensus 83 ~a~~~g~d~V~~~~g~p~~---------------------~i~~l~~-~g~~v~~~v~-------~~~~-----a~~~~~ 128 (332)
T 2z6i_A 83 LVIEEGVKVVTTGAGNPSK---------------------YMERFHE-AGIIVIPVVP-------SVAL-----AKRMEK 128 (332)
T ss_dssp HHHHTTCSEEEECSSCGGG---------------------THHHHHH-TTCEEEEEES-------SHHH-----HHHHHH
T ss_pred HHHHCCCCEEEECCCChHH---------------------HHHHHHH-cCCeEEEEeC-------CHHH-----HHHHHH
Confidence 8889999999999998731 3344444 3889988862 2222 234567
Q ss_pred CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 225 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 225 ~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
.|+|+|.++|++. +|..+ ....|+++.++++.. ++|||++|||.|++++.++++.|||+|++||+++.+|.
T Consensus 129 ~GaD~i~v~g~~~--GG~~g------~~~~~~ll~~i~~~~-~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e 199 (332)
T 2z6i_A 129 IGADAVIAEGMEA--GGHIG------KLTTMTLVRQVATAI-SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKE 199 (332)
T ss_dssp TTCSCEEEECTTS--SEECC------SSCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTT
T ss_pred cCCCEEEEECCCC--CCCCC------CccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCcc
Confidence 9999999998753 23221 123488888888765 89999999999999999999999999999999999996
Q ss_pred c
Q 013784 305 Y 305 (436)
Q Consensus 305 l 305 (436)
.
T Consensus 200 ~ 200 (332)
T 2z6i_A 200 S 200 (332)
T ss_dssp C
T ss_pred c
Confidence 5
No 36
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.88 E-value=9.2e-22 Score=198.52 Aligned_cols=232 Identities=15% Similarity=0.128 Sum_probs=154.9
Q ss_pred ccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhh-------------------cccchhhhhc--
Q 013784 61 MVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIY-------------------QQGNLDRFLA-- 119 (436)
Q Consensus 61 ~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~-------------------~~~~~~~~~~-- 119 (436)
++.+++++|||++|.-.--.+..+-......| .|.+.+.-++++.-.. ++...+.+++
T Consensus 40 ~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G-~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~~ 118 (354)
T 3tjx_A 40 NLLNNTFANPFMNAAGVMCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYA 118 (354)
T ss_dssp EETTEEESSSEEECTTSSCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHH
T ss_pred EECCEEcCCCcEEccCCCCCCHHHHHHHHHcC-CCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHHH
Confidence 37899999999999642224455555555564 7888887776653210 1111222221
Q ss_pred ---cCCCCCcEEEEEcCCCHHHHHHHHHHHHHC---CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 120 ---FSPEQHPIVLQIGGSNLDNLAKATELANAY---NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 120 ---~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~---G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
....+.|+++|++|.+++++.+.++.+.++ ++|.|+||++||+.+ . |..+..+++.+.++++++++.+
T Consensus 119 ~~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g-~~~l~~~~~~~~~i~~~v~~~~ 192 (354)
T 3tjx_A 119 AEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----G-KPQVAYDFDAMRQCLTAVSEVY 192 (354)
T ss_dssp HHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------------CTTSHHHHHHHHHHHHHHC
T ss_pred HHhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----c-hhhhccCHHHHHHHHHHHHHHh
Confidence 233467999999999999888877766543 689999999999864 2 6677889999999999999999
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEc----------cCcc--------cccCCCCCCCCCCCCccH
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH----------SRKA--------LLNGISPAENRTIPPLKY 255 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh----------grt~--------~~~G~~~~~~~~i~~~~~ 255 (436)
..|+.+|++.++++. .....+ ..+.+..+++.++.- .++. ..+|+++. .+.+...
T Consensus 193 ~~pv~vK~~p~~~~~-~~~~~~---~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~---~~~~~a~ 265 (354)
T 3tjx_A 193 PHSFGVKMPPYFDFA-AFDAAA---EILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGR---YVLPTAL 265 (354)
T ss_dssp CSCEEEEECCCCSHH-HHHHHH---HHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGG---GGHHHHH
T ss_pred hcccccccCCCCCch-hHHHHH---HHHHhhcccchhheecccccccccccccccccccCcccccccCch---hhHHHHH
Confidence 999999999988642 122222 222334455554331 1111 11234331 2233345
Q ss_pred HHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHH-hCCcch
Q 013784 256 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY-QNPWYT 306 (436)
Q Consensus 256 ~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l-~~P~lf 306 (436)
+.++++.+..+++|||++|||.|++|+.+++.+|||+||||||++ .+||++
T Consensus 266 ~~v~~~~~~~~~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y~GP~~~ 317 (354)
T 3tjx_A 266 ANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIF 317 (354)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHH
T ss_pred HHHHHHHHhcCCCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhhcCchHH
Confidence 667777777778999999999999999999999999999999975 789986
No 37
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.88 E-value=9.1e-22 Score=199.68 Aligned_cols=248 Identities=14% Similarity=0.163 Sum_probs=174.0
Q ss_pred cccCCeecCCcEEEcCCCCCChHH-------HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEc
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNH-------YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG 132 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~-------fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~ 132 (436)
.++.+..++.||++||| |+++.. +++.|+++| ..+++++|.+.. ++.+.... ..|..+||+
T Consensus 63 t~i~G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G-~~~~~s~~~~~~--------ieev~~~~--~~~~~~QLy 130 (370)
T 1gox_A 63 TTILGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAG-TIMTLSSWATSS--------VEEVASTG--PGIRFFQLY 130 (370)
T ss_dssp EEETTEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTT-CCEEECTTCSSC--------HHHHHTTC--CCCEEEEEC
T ss_pred eEECCcccCCceeEccc-chhhhccchHHHHHHHHHHHcC-CCeeccCCCCCC--------HHHHHhhc--CCCceEEEe
Confidence 44788999999999999 887765 999999996 789999888631 22222222 278999996
Q ss_pred -CCCHHHHHHHHHHHHHCCCCEEEecCCCCCC---------------cc-----cc-------CCCccccc------cCC
Q 013784 133 -GSNLDNLAKATELANAYNYDEINLNCGCPSP---------------KV-----AG-------HGCFGVSL------MLD 178 (436)
Q Consensus 133 -g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~---------------~v-----~r-------~g~yG~~L------l~~ 178 (436)
+.+++...+.++.+++.|++.|+||++||.. ++ .. ... |+.+ +.+
T Consensus 131 ~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~-g~~~~~~v~~~~~ 209 (370)
T 1gox_A 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKAN-DSGLSSYVAGQID 209 (370)
T ss_dssp CBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC----------HHHHHHHTBC
T ss_pred cCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhcccccc-CccHHHHHHhhcC
Confidence 8899988899999999999999999999975 11 11 111 4443 345
Q ss_pred hHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHH
Q 013784 179 PKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYE 256 (436)
Q Consensus 179 ~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~ 256 (436)
+.+..+.++++++.+++||.+|.... .++ ++.+.++|+|+|+| ||.... ++ .+..++
T Consensus 210 ~~~~~~~i~~l~~~~~~pv~vK~~~~------~e~-----a~~a~~~Gad~I~vs~~ggr~~-------~~---~~~~~~ 268 (370)
T 1gox_A 210 RSLSWKDVAWLQTITSLPILVKGVIT------AED-----ARLAVQHGAAGIIVSNHGARQL-------DY---VPATIM 268 (370)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEECCCS------HHH-----HHHHHHTTCSEEEECCGGGTSS-------TT---CCCHHH
T ss_pred ccchHHHHHHHHHHhCCCEEEEecCC------HHH-----HHHHHHcCCCEEEECCCCCccC-------CC---cccHHH
Confidence 56566778999998899999998732 222 33456799999999 542111 11 123478
Q ss_pred HHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHH
Q 013784 257 YYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYG 335 (436)
Q Consensus 257 ~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~ 335 (436)
.+.++++.+. ++|||++|||.+++|+.+++++|||+|||||+++.... . .| .....+.++.+.+.+
T Consensus 269 ~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~------~---~G----~~gv~~~~~~l~~el 335 (370)
T 1gox_A 269 ALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLA------A---EG----EAGVKKVLQMMRDEF 335 (370)
T ss_dssp HHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHH------H---HH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHh------h---cc----HHHHHHHHHHHHHHH
Confidence 8888877654 79999999999999999999999999999998764311 1 11 012234555666666
Q ss_pred HHHHHhcCCCchHHHHHHHHH
Q 013784 336 DAILGTYGNNRPHVRDVMKPL 356 (436)
Q Consensus 336 ~~~~~~~g~~~~~~~~~~k~~ 356 (436)
+..+..+|. ..+.+++++.
T Consensus 336 ~~~m~~~G~--~~i~el~~~~ 354 (370)
T 1gox_A 336 ELTMALSGC--RSLKEISRSH 354 (370)
T ss_dssp HHHHHHHTC--SBTTTCCGGG
T ss_pred HHHHHHhCC--CCHHHhhhcc
Confidence 666777775 2455555544
No 38
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.88 E-value=3.8e-22 Score=203.65 Aligned_cols=211 Identities=15% Similarity=0.138 Sum_probs=154.2
Q ss_pred cccCCeecCCcEEEcCCCCCChHH-------HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEc
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNH-------YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG 132 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~-------fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~ 132 (436)
.++.+..++.||++||| |+++.. ++++|+++| ..+++++|.+ ..+- ..... ..+.|+.+||+
T Consensus 86 t~i~G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G-~~~~~s~~~s-~~le-------~v~~~-~~~~~~~~QLy 154 (392)
T 2nzl_A 86 TSVLGQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLG-TGMMLSSWAT-SSIE-------EVAEA-GPEALRWLQLY 154 (392)
T ss_dssp EEETTEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHT-CEEEECTTCS-SCHH-------HHHHH-CTTSEEEEEEC
T ss_pred eEECCEecCCceEeccc-cccccccchHHHHHHHHHHHcC-CCeeccchHH-HHHH-------HHHHh-cCCCcEEEEEE
Confidence 34789999999999999 766554 999999996 7889999886 2221 11111 13679999998
Q ss_pred C-CCHHHHHHHHHHHHHCCCCEEEecCCCCCC---------------ccc-cC--------------CCccc---cccC-
Q 013784 133 G-SNLDNLAKATELANAYNYDEINLNCGCPSP---------------KVA-GH--------------GCFGV---SLML- 177 (436)
Q Consensus 133 g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~---------------~v~-r~--------------g~yG~---~Ll~- 177 (436)
+ .+++...+.+++++++|++.++||++||.. ++. ++ +. |+ +++.
T Consensus 155 ~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~-g~~~~~~~~~ 233 (392)
T 2nzl_A 155 IYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGD-DSGLAAYVAK 233 (392)
T ss_dssp CBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC------------------CHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccC-cchHHHHHhh
Confidence 7 788999999999999999999999999984 220 00 11 22 2333
Q ss_pred --ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccH
Q 013784 178 --DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 255 (436)
Q Consensus 178 --~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~ 255 (436)
++++..+.++++++.+++||.+|. +. +.++ ++.++++|+|+|+|+++...+ . ...+..+
T Consensus 234 ~~d~~~~~~~i~~lr~~~~~PvivKg---v~---~~e~-----A~~a~~aGad~I~vs~~ggr~-----~---~~g~~~~ 294 (392)
T 2nzl_A 234 AIDPSISWEDIKWLRRLTSLPIVAKG---IL---RGDD-----AREAVKHGLNGILVSNHGARQ-----L---DGVPATI 294 (392)
T ss_dssp HBCTTCCHHHHHHHC--CCSCEEEEE---EC---CHHH-----HHHHHHTTCCEEEECCGGGTS-----S---TTCCCHH
T ss_pred cCChHHHHHHHHHHHHhhCCCEEEEe---cC---CHHH-----HHHHHHcCCCEEEeCCCCCCc-----C---CCCcChH
Confidence 677778889999999999999993 32 2222 345567999999996543211 0 1123347
Q ss_pred HHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 256 EYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 256 ~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
+.+.++++.+. ++|||++|||.+++|+.+++.+|||+|||||+++.
T Consensus 295 ~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 295 DVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVW 341 (392)
T ss_dssp HHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHH
Confidence 88888876643 69999999999999999999999999999997664
No 39
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.86 E-value=5.8e-21 Score=200.90 Aligned_cols=212 Identities=13% Similarity=0.090 Sum_probs=156.1
Q ss_pred ccccCCeecCCcEEEcCCCC---C----ChHHHHHHHHH--cCCCcEEEeccccc-hhhhhcccchhhhhccC-CCCCcE
Q 013784 59 AEMVARQYLPPWFSVAPMMD---W----TDNHYRTLARL--ISKHAWLYTEMLAA-ETIIYQQGNLDRFLAFS-PEQHPI 127 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMag---v----td~~fr~~~~~--~Gg~gl~~temv~~-~~l~~~~~~~~~~~~~~-~~~~pi 127 (436)
..++.+..++.||++|||++ . ++.+++++|++ +| +++++++|.+. -..+. ... +.+.|.
T Consensus 180 st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G-~~~~~s~~a~~s~e~v~---------~~~~~~~~~~ 249 (511)
T 1kbi_A 180 STDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTK-VPQMISTLASCSPEEII---------EAAPSDKQIQ 249 (511)
T ss_dssp CEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSC-CCEEECTTCSSCHHHHH---------HTCCCSSCCE
T ss_pred ccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCC-eeEEeCCcccCCHHHHH---------hhcCCCCCCe
Confidence 44578999999999999997 3 47899999998 86 78999998432 22211 112 235789
Q ss_pred EEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCc----------------ccc-----CCCccc--ccc---CChH
Q 013784 128 VLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPK----------------VAG-----HGCFGV--SLM---LDPK 180 (436)
Q Consensus 128 ~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~----------------v~r-----~g~yG~--~Ll---~~~~ 180 (436)
.+||+ +.+++...+++++++++|+++|.|+..||..- +.. .+.+++ .++ .+++
T Consensus 250 ~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~ 329 (511)
T 1kbi_A 250 WYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPS 329 (511)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTT
T ss_pred EEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChH
Confidence 99998 88999999999999999999999999998711 110 111111 223 4677
Q ss_pred HHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHHHH
Q 013784 181 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYY 258 (436)
Q Consensus 181 ~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~~v 258 (436)
+..++++++++.+++||.+|. +. +.++ ++.++++|+|+|+| ||+++... .+..++.+
T Consensus 330 ~~~~~i~~lr~~~~~PvivKg---v~---~~e~-----A~~a~~aGad~I~vs~hgG~~~d~----------~~~~~~~l 388 (511)
T 1kbi_A 330 LTWKDIEELKKKTKLPIVIKG---VQ---RTED-----VIKAAEIGVSGVVLSNHGGRQLDF----------SRAPIEVL 388 (511)
T ss_dssp CCHHHHHHHHHHCSSCEEEEE---EC---SHHH-----HHHHHHTTCSEEEECCTTTTSSTT----------CCCHHHHH
T ss_pred hHHHHHHHHHHHhCCcEEEEe---CC---CHHH-----HHHHHHcCCCEEEEcCCCCccCCC----------CCchHHHH
Confidence 778889999999999999993 32 2222 34567899999999 55443211 12237777
Q ss_pred HHHHhcC------CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 259 YALLRDF------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 259 ~~l~~~~------~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
.++++.+ .++|||++|||.++.|+.+++.+|||+|||||+++.
T Consensus 389 ~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 389 AETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLY 437 (511)
T ss_dssp HHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 7776543 379999999999999999999999999999997663
No 40
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.85 E-value=1.3e-20 Score=188.56 Aligned_cols=217 Identities=15% Similarity=0.091 Sum_probs=143.4
Q ss_pred cccCCeecCCcEEEcCCCCCCh------HHHHHHHHHcCCCcEEEeccccchhhhh-cccchhhhhccCCCCCcEE----
Q 013784 60 EMVARQYLPPWFSVAPMMDWTD------NHYRTLARLISKHAWLYTEMLAAETIIY-QQGNLDRFLAFSPEQHPIV---- 128 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd------~~fr~~~~~~Gg~gl~~temv~~~~l~~-~~~~~~~~~~~~~~~~pi~---- 128 (436)
.++.+..+++|+++|||++.++ .+++.+|+++| .++++++|.+. +.+ +.....++ .....+.|++
T Consensus 50 ~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G-~~~~~~~~~~~--le~~~~~~~~ql-~~~~~d~pv~~~~~ 125 (332)
T 1vcf_A 50 TPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALG-VGMMLGSGRIL--LERPEALRSFRV-RKVAPKALLIANLG 125 (332)
T ss_dssp EEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHT-CEEEEEECHHH--HHCTTTHHHHCC-TTTCSSSCEEEEEE
T ss_pred eEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcC-CCEEeCCchhc--ccCCCccceEEe-eccCCCceeecccC
Confidence 4578999999999999998774 48999999997 78999999875 321 11111111 2223467886
Q ss_pred -EEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE-eccCCC
Q 013784 129 -LQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK-CRIGVD 206 (436)
Q Consensus 129 -vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK-iR~G~~ 206 (436)
.|+++.+++++.++++.+ ++|++++|..+...... . |. .+.+.+.++++++++ +++||.+| +..|+
T Consensus 126 ~~q~~~~~~~~~~~a~~~~---~~~a~~i~~n~~~~~~~-~---~~---~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~- 193 (332)
T 1vcf_A 126 LAQLRRYGRDDLLRLVEML---EADALAFHVNPLQEAVQ-R---GD---TDFRGLVERLAELLP-LPFPVMVKEVGHGL- 193 (332)
T ss_dssp GGGGGTCCHHHHHHHHHHH---TCSEEEEECCHHHHHHT-T---SC---CCCTTHHHHHHHHCS-CSSCEEEECSSSCC-
T ss_pred hhhhhccChHHHHHHHhhc---CCCceeeccchHHHHhc-C---CC---ccHHHHHHHHHHHHc-CCCCEEEEecCCCC-
Confidence 666778899988887654 56766555433221111 1 11 111236788999999 99999999 54332
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEE--ccCcc-------ccc---CCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFII--HSRKA-------LLN---GISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~-------~~~---G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
+.++ ++.++++|+|+|+| ||++. ... +.... ....+..++.+.++++...++|||++|
T Consensus 194 ---~~e~-----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~--~~~g~~~~~~l~~v~~~~~~ipvia~G 263 (332)
T 1vcf_A 194 ---SREA-----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPEL--CEIGIPTARAILEVREVLPHLPLVASG 263 (332)
T ss_dssp ---CHHH-----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CC--TTCSCBHHHHHHHHHHHCSSSCEEEES
T ss_pred ---CHHH-----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhH--hhccccHHHHHHHHHHhcCCCeEEEEC
Confidence 2222 34567899999999 66541 100 00000 011223477788887765579999999
Q ss_pred CCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 275 GINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
||.+++|+.+++.+|||+||+||+++..
T Consensus 264 GI~~~~d~~kal~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 264 GVYTGTDGAKALALGADLLAVARPLLRP 291 (332)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CCCCHHHHHHHHHhCCChHhhhHHHHHH
Confidence 9999999999999999999999976643
No 41
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.84 E-value=6.3e-20 Score=186.04 Aligned_cols=198 Identities=13% Similarity=0.108 Sum_probs=149.8
Q ss_pred CCcEEEcCCCC-CChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHH---------
Q 013784 68 PPWFSVAPMMD-WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLD--------- 137 (436)
Q Consensus 68 ~n~iilAPMag-vtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~--------- 137 (436)
+.||++|||+| +|+..++.++.++||+|++.+++++++.+....++++.. .+.|++|||+.+.+.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~-----~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGL-----TGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHH-----CCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHh-----CCCCeEEEEecCCCCcccHHHHHH
Confidence 88999999995 999999999999999999999999999887766666655 357999999987541
Q ss_pred -------------------------HHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc
Q 013784 138 -------------------------NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN 192 (436)
Q Consensus 138 -------------------------~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~ 192 (436)
.+.+.++.+.+.|+|.|.+|+|||.. ++++.+++
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~--------------------~~i~~~~~- 143 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDR--------------------EVIARLRR- 143 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCH--------------------HHHHHHHH-
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcH--------------------HHHHHHHH-
Confidence 13556677888999999999998742 23334443
Q ss_pred cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCC-----CccHHHHHHHHhcCCC
Q 013784 193 TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIP-----PLKYEYYYALLRDFPD 267 (436)
Q Consensus 193 ~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~-----~~~~~~v~~l~~~~~~ 267 (436)
.+++|.+++. +.++ ++.+++.|+|+|.++|++. +|..+....... ...++++.++++.+ +
T Consensus 144 ~g~~v~~~v~-------t~~~-----a~~a~~~GaD~i~v~g~~~--GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~ 208 (369)
T 3bw2_A 144 AGTLTLVTAT-------TPEE-----ARAVEAAGADAVIAQGVEA--GGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-D 208 (369)
T ss_dssp TTCEEEEEES-------SHHH-----HHHHHHTTCSEEEEECTTC--SEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-S
T ss_pred CCCeEEEECC-------CHHH-----HHHHHHcCCCEEEEeCCCc--CCcCCCcccccccccccccHHHHHHHHHHhc-C
Confidence 3778877652 2332 2344679999999998764 222111100010 11378888887765 8
Q ss_pred cEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 268 LTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 268 iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
+|||++|||.+++++.++++.|||+|++||+++.+|+..
T Consensus 209 iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 209 IPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp SCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTCC
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCcccC
Confidence 999999999999999999999999999999999999874
No 42
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.84 E-value=3.8e-20 Score=184.73 Aligned_cols=195 Identities=10% Similarity=0.033 Sum_probs=150.1
Q ss_pred cCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHH
Q 013784 62 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAK 141 (436)
Q Consensus 62 i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~ 141 (436)
...+.+++||++|||+|+|+..++.++.+.||.|++.+++++++.+....+++++. .+.|+++|++..+++ +.+
T Consensus 20 ~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~-----~~~p~gVnl~~~~~~-~~~ 93 (326)
T 3bo9_A 20 TDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQK-----TDKPFGVNIILVSPW-ADD 93 (326)
T ss_dssp HHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTT-----CSSCEEEEEETTSTT-HHH
T ss_pred HHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEEeccCCC-HHH
Confidence 35677899999999999999999999999999999999998887765544444333 368999999997664 355
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKV 221 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~ 221 (436)
.++.+.+.|+|.|.++.|||.. +++.+++ .++++.+++. +.++ ++.
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p~~---------------------~~~~l~~-~g~~v~~~v~-------s~~~-----a~~ 139 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNPTK---------------------YIRELKE-NGTKVIPVVA-------SDSL-----ARM 139 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCCHH---------------------HHHHHHH-TTCEEEEEES-------SHHH-----HHH
T ss_pred HHHHHHHCCCCEEEECCCCcHH---------------------HHHHHHH-cCCcEEEEcC-------CHHH-----HHH
Confidence 6677778899999999988731 2233333 3788877652 2222 223
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
+++.|+|+|.++|++. +|..+ . ...|+++.++++.. ++|||++|||.|++++.++++.|||+|++||+++.
T Consensus 140 a~~~GaD~i~v~g~~~--GG~~G----~--~~~~~ll~~i~~~~-~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~ 210 (326)
T 3bo9_A 140 VERAGADAVIAEGMES--GGHIG----E--VTTFVLVNKVSRSV-NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVA 210 (326)
T ss_dssp HHHTTCSCEEEECTTS--SEECC----S--SCHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHcCCCEEEEECCCC--CccCC----C--ccHHHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHc
Confidence 4569999999998764 23322 1 12488888888775 89999999999999999999999999999999999
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
++..
T Consensus 211 ~~e~ 214 (326)
T 3bo9_A 211 SVES 214 (326)
T ss_dssp BSSC
T ss_pred Cccc
Confidence 8874
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.83 E-value=2.1e-19 Score=179.27 Aligned_cols=193 Identities=12% Similarity=0.024 Sum_probs=146.3
Q ss_pred eecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEecccc-chhhhhcccchhhhhccCCCCCcEEEEEcCC----CHHHH
Q 013784 65 QYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLA-AETIIYQQGNLDRFLAFSPEQHPIVLQIGGS----NLDNL 139 (436)
Q Consensus 65 l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~-~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~----~p~~~ 139 (436)
+.++.||++|||+|+|+..++..+.++||.|++.+++.. ++.+....+++++. .+.|+.+|++.+ +++ +
T Consensus 12 l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~-----~~~p~~v~l~v~~~~~~~~-~ 85 (328)
T 2gjl_A 12 FGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL-----TDRPFGVNLTLLPTQKPVP-Y 85 (328)
T ss_dssp HTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH-----CSSCCEEEEEECCCSSCCC-H
T ss_pred hCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh-----cCCCeEEEEeccccccCcc-H
Confidence 457899999999999999999999999999999888766 55554433334333 357999999987 333 5
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 140 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 140 ~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
.+.++.+.+.|+|.|.+|.|||. ++++.+++. ++|+..++. +.++ +
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~---------------------~~~~~l~~~-gi~vi~~v~-------t~~~-----a 131 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPG---------------------EHIAEFRRH-GVKVIHKCT-------AVRH-----A 131 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCH---------------------HHHHHHHHT-TCEEEEEES-------SHHH-----H
T ss_pred HHHHHHHHhcCCCEEEEcCCCcH---------------------HHHHHHHHc-CCCEEeeCC-------CHHH-----H
Confidence 56777888899999999988761 233445444 788876542 2222 2
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
+.+++.|+|+|.++|++. +|..+.. ....|+++.++++.. ++|||++|||.+++++.++++.|||+|++||++
T Consensus 132 ~~~~~~GaD~i~v~g~~~--GG~~G~~----~~~~~~~l~~v~~~~-~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~ 204 (328)
T 2gjl_A 132 LKAERLGVDAVSIDGFEC--AGHPGED----DIPGLVLLPAAANRL-RVPIIASGGFADGRGLVAALALGADAINMGTRF 204 (328)
T ss_dssp HHHHHTTCSEEEEECTTC--SBCCCSS----CCCHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHHcCCCEEEEECCCC--CcCCCCc----cccHHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 234569999999998875 2332211 123488888887765 899999999999999999999999999999999
Q ss_pred HhCCc
Q 013784 300 YQNPW 304 (436)
Q Consensus 300 l~~P~ 304 (436)
+.+|.
T Consensus 205 ~~~~e 209 (328)
T 2gjl_A 205 LATRE 209 (328)
T ss_dssp HTSSS
T ss_pred HcCcc
Confidence 99987
No 44
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.81 E-value=2.5e-19 Score=182.34 Aligned_cols=249 Identities=16% Similarity=0.068 Sum_probs=170.3
Q ss_pred cccCCeecCCcEEEcCCCC--C----ChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcC
Q 013784 60 EMVARQYLPPWFSVAPMMD--W----TDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG 133 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMag--v----td~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g 133 (436)
.++.+..+++||++|||++ . ++.++++.|+++| +++++++ ++...+.. +... .+.|..+||+.
T Consensus 64 t~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G-~~~~vss-~s~~~le~----i~~~-----~~~~~~fQly~ 132 (380)
T 1p4c_A 64 AEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAG-IPFVLST-ASNMSIED----LARQ-----CDGDLWFQLYV 132 (380)
T ss_dssp EEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHT-CCEEECT-TCSSCHHH----HHHH-----CCSCEEEEECC
T ss_pred eEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcC-CCeecCc-cccCCHHH----HHhc-----cCCCeEEEEEe
Confidence 4478999999999999976 4 8899999999996 7888887 33222221 1111 35789999986
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEe--------------cCCCCCCccc----------cC--CCccccc---cC---ChHH
Q 013784 134 SNLDNLAKATELANAYNYDEINL--------------NCGCPSPKVA----------GH--GCFGVSL---ML---DPKF 181 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdL--------------N~gcP~~~v~----------r~--g~yG~~L---l~---~~~~ 181 (436)
...+...+..+.+++.|++.+.| |.||+.+... ++ ..-+.++ +. +|++
T Consensus 133 ~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~ 212 (380)
T 1p4c_A 133 IHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASF 212 (380)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTC
T ss_pred chHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccc
Confidence 55666667788888999987765 5688543110 00 0102222 22 6777
Q ss_pred HHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHHHHH
Q 013784 182 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYY 259 (436)
Q Consensus 182 l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~~v~ 259 (436)
..++++++++.+++||.+|. + .+.++ ++.+.++|+|+|+| ||++....| +..++.+.
T Consensus 213 ~~~~i~~i~~~~~~Pv~vkg---v---~t~e~-----a~~a~~aGad~I~vs~~gg~~~d~~----------~~~~~~l~ 271 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVKG---L---LSAED-----ADRCIAEGADGVILSNHGGRQLDCA----------ISPMEVLA 271 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEEE---E---CCHHH-----HHHHHHTTCSEEEECCGGGTSCTTC----------CCGGGTHH
T ss_pred cHHHHHHHHHhcCCCEEEEe---c---CcHHH-----HHHHHHcCCCEEEEcCCCCCcCCCC----------cCHHHHHH
Confidence 78999999999999999993 2 22332 33456799999999 766532211 22367777
Q ss_pred HHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHH
Q 013784 260 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAIL 339 (436)
Q Consensus 260 ~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~ 339 (436)
++++.+ ++|||++|||.+++|+.+++.+|||+||+||+++.... . .| .....+.++.+.+.++..+
T Consensus 272 ~v~~~~-~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~------~---~g----~~~v~~~~~~l~~el~~~m 337 (380)
T 1p4c_A 272 QSVAKT-GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLA------A---RG----ETGVDEVLTLLKADIDRTL 337 (380)
T ss_dssp HHHHHH-CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHH------H---HH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHH------h---cC----HHHHHHHHHHHHHHHHHHH
Confidence 777765 67999999999999999999999999999999975311 1 11 1123445566666666677
Q ss_pred HhcCCCchHHHHHHHHH
Q 013784 340 GTYGNNRPHVRDVMKPL 356 (436)
Q Consensus 340 ~~~g~~~~~~~~~~k~~ 356 (436)
..+|. ..+.+++++.
T Consensus 338 ~~~G~--~~i~el~~~~ 352 (380)
T 1p4c_A 338 AQIGC--PDITSLSPDY 352 (380)
T ss_dssp HHHTC--CBGGGCCGGG
T ss_pred HHhCC--CCHHHhccCe
Confidence 77775 2456666654
No 45
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.77 E-value=1.7e-18 Score=175.19 Aligned_cols=218 Identities=16% Similarity=0.120 Sum_probs=145.2
Q ss_pred cccCCeecCCcEEEcCCCCCChHH------HHHHHHHcCCCcEEEeccccc--hhhhhcccchhhhhccCCCCCcEEEEE
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNH------YRTLARLISKHAWLYTEMLAA--ETIIYQQGNLDRFLAFSPEQHPIVLQI 131 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~------fr~~~~~~Gg~gl~~temv~~--~~l~~~~~~~~~~~~~~~~~~pi~vQL 131 (436)
.++++..++.|+++|||+|.|+.+ |+.+|+++| .++.+.+|... +.......+. ..+..| +.|++.++
T Consensus 51 t~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G-~~~~vGs~~~~l~~~~~~~s~~~--vr~~ap-~~~~~anl 126 (368)
T 3vkj_A 51 TKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFG-IPMGVGSQRVAIEKAEARESFAI--VRKVAP-TIPIIANL 126 (368)
T ss_dssp EEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHT-CCEECCCCHHHHHCGGGSHHHHH--HHHHCS-SSCEEEEE
T ss_pred eEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhC-CCeeeecchhccCCHHHHhhHHH--HHHhCc-CcceecCc
Confidence 347899999999999999999877 589999996 88999998654 2222222111 112333 45777665
Q ss_pred cC------CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChH-HHHHHHHHHhhccCCcEEEEeccC
Q 013784 132 GG------SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK-FVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 132 ~g------~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~-~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
.+ .+++.+.++++.+ ++|+..|+||... .+... . |. .+.. ...+.++.+++.+++||.+|. .|
T Consensus 127 g~~ql~~~~~~~~~~~av~~~-~a~al~Ihln~~~---~~~~p-~-g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG 196 (368)
T 3vkj_A 127 GMPQLVKGYGLKEFQDAIQMI-EADAIAVHLNPAQ---EVFQP-E-GE---PEYQIYALEKLRDISKELSVPIIVKE-SG 196 (368)
T ss_dssp EGGGGGTTCCHHHHHHHHHHT-TCSEEEEECCHHH---HHHSS-S-CC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SS
T ss_pred CeeecCCCCCHHHHHHHHHHh-cCCCeEEEecchh---hhhCC-C-CC---chhhHHHHHHHHHHHHHcCCCEEEEe-CC
Confidence 54 7788888888877 5566667777332 11111 1 11 1112 367888999999999999997 55
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEE--ccCccc--------cc--------CCCCCCCCCCCCccHHHHHHHHhcCC
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKAL--------LN--------GISPAENRTIPPLKYEYYYALLRDFP 266 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~--------~~--------G~~~~~~~~i~~~~~~~v~~l~~~~~ 266 (436)
+.. +.++ ++.++++|+|+|+| ||+|.+ .. +..-.+| .+++ ...+.++++...
T Consensus 197 ~g~--s~~~-----A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~-g~pt--~~~l~~v~~~~~ 266 (368)
T 3vkj_A 197 NGI--SMET-----AKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDW-GVPT--AASIMEVRYSVP 266 (368)
T ss_dssp SCC--CHHH-----HHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTC-SCBH--HHHHHHHHHHST
T ss_pred CCC--CHHH-----HHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccc-cccH--HHHHHHHHHHcC
Confidence 443 2222 44567899999999 445311 00 0000111 1222 455667766665
Q ss_pred CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 267 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 267 ~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
++|||++|||.++.|+.+++..|||+||+||+++.
T Consensus 267 ~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 267 DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLK 301 (368)
T ss_dssp TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHH
Confidence 79999999999999999999999999999997653
No 46
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.77 E-value=7.7e-18 Score=168.67 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=143.9
Q ss_pred ccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhc-cCCCCCcEEEEEcCCCHHHH
Q 013784 61 MVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLA-FSPEQHPIVLQIGGSNLDNL 139 (436)
Q Consensus 61 ~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~-~~~~~~pi~vQL~g~~p~~~ 139 (436)
++.++.+++||++|||+++|+.+|+..+.+.||.|++++++.... +.+++ ..+.+.|+.+|+ |..++.+
T Consensus 39 ~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~---------~~~i~~~~~~g~~v~v~~-g~~~~~~ 108 (336)
T 1ypf_A 39 TLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKR---------ISFIRDMQSRGLIASISV-GVKEDEY 108 (336)
T ss_dssp EETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGH---------HHHHHHHHHTTCCCEEEE-CCSHHHH
T ss_pred EECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHH---------HHHHHHHHhcCCeEEEeC-CCCHHHH
Confidence 477899999999999999999999887778888999888765321 11111 112345899995 7777766
Q ss_pred HHHHHHHHHCC--CCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHH
Q 013784 140 AKATELANAYN--YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDF 217 (436)
Q Consensus 140 ~~aA~~~~~~G--~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~ 217 (436)
.. ++.+.+.| ++.|++|++. | ++....++++++++.++.|+.+|-. . .+.++
T Consensus 109 ~~-a~~~~~~g~~~~~i~i~~~~-----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~--v---~s~e~---- 162 (336)
T 1ypf_A 109 EF-VQQLAAEHLTPEYITIDIAH-----------G-----HSNAVINMIQHIKKHLPESFVIAGN--V---GTPEA---- 162 (336)
T ss_dssp HH-HHHHHHTTCCCSEEEEECSS-----------C-----CSHHHHHHHHHHHHHCTTSEEEEEE--E---CSHHH----
T ss_pred HH-HHHHHhcCCCCCEEEEECCC-----------C-----CcHHHHHHHHHHHHhCCCCEEEECC--c---CCHHH----
Confidence 54 56667778 9999998741 2 5677889999999988544444411 1 12222
Q ss_pred HHHHhhcCCccEEEE--ccCccc----ccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCC
Q 013784 218 IYKVSSLSPTRHFII--HSRKAL----LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH 291 (436)
Q Consensus 218 la~~~e~~Gvd~I~v--hgrt~~----~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad 291 (436)
++.++++|+|+|++ ||++.. ..|.+ .+...+..+.++++.. ++|||++|||.++.|+.+++.+|||
T Consensus 163 -A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g------~~g~~~~~l~~v~~~~-~ipVIa~GGI~~g~Dv~kalalGAd 234 (336)
T 1ypf_A 163 -VRELENAGADATKVGIGPGKVCITKIKTGFG------TGGWQLAALRWCAKAA-SKPIIADGGIRTNGDVAKSIRFGAT 234 (336)
T ss_dssp -HHHHHHHTCSEEEECSSCSTTCHHHHHHSCS------STTCHHHHHHHHHHTC-SSCEEEESCCCSTHHHHHHHHTTCS
T ss_pred -HHHHHHcCCCEEEEecCCCceeecccccCcC------CchhHHHHHHHHHHHc-CCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 34556799999999 664321 11211 1111377788888776 9999999999999999999999999
Q ss_pred eeeehHHHHhCCc
Q 013784 292 HVMVGRAAYQNPW 304 (436)
Q Consensus 292 ~VmiGRa~l~~P~ 304 (436)
+||+||+++....
T Consensus 235 aV~iGr~~l~t~E 247 (336)
T 1ypf_A 235 MVMIGSLFAGHEE 247 (336)
T ss_dssp EEEESGGGTTCTT
T ss_pred EEEeChhhhcccc
Confidence 9999999997543
No 47
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.76 E-value=7.7e-18 Score=172.67 Aligned_cols=207 Identities=12% Similarity=0.077 Sum_probs=141.9
Q ss_pred cC-CeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhh----------------------
Q 013784 62 VA-RQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFL---------------------- 118 (436)
Q Consensus 62 i~-~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~---------------------- 118 (436)
+. ++.+++||++|||+++++.+++..+.++||.|++. .+++.+.+....+...++.
T Consensus 35 l~~g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~ 113 (404)
T 1eep_A 35 LTKNISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAK 113 (404)
T ss_dssp SSSSCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHTCC----------------------
T ss_pred ccCCcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHHHhhccCCCceeccccccccccccccC
Confidence 54 89999999999999999999999999999988876 4556665543322111110
Q ss_pred ----------c-----cCC-------CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc
Q 013784 119 ----------A-----FSP-------EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM 176 (436)
Q Consensus 119 ----------~-----~~~-------~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll 176 (436)
+ ..| ...++++++... ++. .+.++.+.+.|+|.|+||+++ |
T Consensus 114 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~~-~~~a~~~~~~G~d~i~i~~~~-----------g---- 176 (404)
T 1eep_A 114 QHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSID-IDT-IERVEELVKAHVDILVIDSAH-----------G---- 176 (404)
T ss_dssp ----------------CCTTCCBCTTSCBCCEEEECSC-TTH-HHHHHHHHHTTCSEEEECCSC-----------C----
T ss_pred CCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCC-hhH-HHHHHHHHHCCCCEEEEeCCC-----------C----
Confidence 0 001 012478888753 333 445566678899999998653 1
Q ss_pred CChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEc------cCcccccCCCCCCCCC
Q 013784 177 LDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH------SRKALLNGISPAENRT 249 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh------grt~~~~G~~~~~~~~ 249 (436)
+++.+.++++++++.+ ++||.++.- .+.++ ++.++++|+|+|++. .++....|.+
T Consensus 177 -~~~~~~e~i~~ir~~~~~~pviv~~v------~~~~~-----a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g------ 238 (404)
T 1eep_A 177 -HSTRIIELIKKIKTKYPNLDLIAGNI------VTKEA-----ALDLISVGADCLKVGIGPGSICTTRIVAGVG------ 238 (404)
T ss_dssp -SSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHH-----HHHHHTTTCSEEEECSSCSTTSHHHHHHCCC------
T ss_pred -ChHHHHHHHHHHHHHCCCCeEEEcCC------CcHHH-----HHHHHhcCCCEEEECCCCCcCcCccccCCCC------
Confidence 3578889999999988 899987421 12222 334567999999992 1111111111
Q ss_pred CCCccHHHHHHHHh--cCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 250 IPPLKYEYYYALLR--DFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 250 i~~~~~~~v~~l~~--~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
...++.+..+.+ ...++|||++|||.+++|+.+++++|||+|++||+++.+|+..
T Consensus 239 --~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 239 --VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESP 295 (404)
T ss_dssp --CCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSS
T ss_pred --cchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCC
Confidence 112444544443 1238999999999999999999999999999999999998874
No 48
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.74 E-value=2.4e-17 Score=166.45 Aligned_cols=202 Identities=14% Similarity=0.063 Sum_probs=141.2
Q ss_pred CCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 63 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 63 ~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
..+.++.||++|||+++|+..++..+.+.||.|++.. ..+++......++.+.. ...|++++++.++ .+.
T Consensus 40 ~~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~-~~s~e~~~~~I~~vk~~-----~~~pvga~ig~~~----~e~ 109 (361)
T 3khj_A 40 KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVKNS-----GGLRVGAAIGVNE----IER 109 (361)
T ss_dssp SSCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECS-SSCHHHHHHHHHHHHHT-----TCCCCEEEECTTC----HHH
T ss_pred cccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEec-CCCHHHHHHHHHHHHhc-----cCceEEEEeCCCH----HHH
Confidence 4788999999999999999999998888898888764 33444333222222221 4678999998766 455
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHh
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 222 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~ 222 (436)
++.+.++|+|.|.||.+. | +++.+.+.++.+++.+++||.++.- .+.++ ++.+
T Consensus 110 a~~l~eaGad~I~ld~a~-----------G-----~~~~~~~~i~~i~~~~~~~Vivg~v------~t~e~-----A~~l 162 (361)
T 3khj_A 110 AKLLVEAGVDVIVLDSAH-----------G-----HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEA-----TKEL 162 (361)
T ss_dssp HHHHHHTTCSEEEECCSC-----------C-----SBHHHHHHHHHHHHHCCCEEEEEEE------CSHHH-----HHHH
T ss_pred HHHHHHcCcCeEEEeCCC-----------C-----CcHHHHHHHHHHHHhcCCcEEEccC------CCHHH-----HHHH
Confidence 667778899999998542 1 3466788888888888999888532 23332 2345
Q ss_pred hcCCccEEEEccCcccccCC-CC-CCCCCCCCccHHHHHHHH---hcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 223 SLSPTRHFIIHSRKALLNGI-SP-AENRTIPPLKYEYYYALL---RDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~-~~-~~~~~i~~~~~~~v~~l~---~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
.++|+|+|.+.. .. |. .. ..-.......+..+.++. +.. ++|||++|||.+++|+.++++.|||+||+||
T Consensus 163 ~~aGaD~I~VG~-~~---Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~-~iPVIA~GGI~~~~di~kala~GAd~V~vGs 237 (361)
T 3khj_A 163 IENGADGIKVGI-GP---GSICTTRIVAGVGVPQITAIEKCSSVASKF-GIPIIADGGIRYSGDIGKALAVGASSVMIGS 237 (361)
T ss_dssp HHTTCSEEEECS-SC---CTTCCHHHHTCBCCCHHHHHHHHHHHHHHH-TCCEEEESCCCSHHHHHHHHHHTCSEEEEST
T ss_pred HHcCcCEEEEec-CC---CcCCCcccccCCCCCcHHHHHHHHHHHhhc-CCeEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 679999999932 11 10 00 000001112255555553 333 7999999999999999999999999999999
Q ss_pred HHHhCCcch
Q 013784 298 AAYQNPWYT 306 (436)
Q Consensus 298 a~l~~P~lf 306 (436)
+++..+.-.
T Consensus 238 ~~~~t~Esp 246 (361)
T 3khj_A 238 ILAGTEESP 246 (361)
T ss_dssp TTTTBTTSS
T ss_pred hhhcCCcCC
Confidence 999987753
No 49
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.73 E-value=1.6e-17 Score=167.57 Aligned_cols=219 Identities=12% Similarity=0.031 Sum_probs=131.2
Q ss_pred cccCCeecCCcEEEcCCCCCChHH------HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcC
Q 013784 60 EMVARQYLPPWFSVAPMMDWTDNH------YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG 133 (436)
Q Consensus 60 ~~i~~l~l~n~iilAPMagvtd~~------fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g 133 (436)
.++++..++.||++|||+|.++.+ |+.+|++.| .++...++...-.-... ....+.+.. .+.+++.+|.+
T Consensus 78 t~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G-~~~~vGs~~~~le~~~~--~~~~v~r~~-P~~~~ianig~ 153 (365)
T 3sr7_A 78 THFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCG-LLFVTGSYSTALKNPDD--TSYQVKKSR-PHLLLATNIGL 153 (365)
T ss_dssp EEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHT-CCEEC--------------------------CCEEEEEET
T ss_pred EEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcC-CCeecccccccccCccc--cceEehhhC-CCCcEEEEeCC
Confidence 347899999999999999988654 999999996 77777776642111000 111112222 36789999987
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHH
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~ 213 (436)
..+.+ ++.+.++..|+|.+.+|.-.....+...|. .+.+-..+.++.+++.+++||.+|. .|+.. +.++
T Consensus 154 ~~~~e--~~~~~ve~~~adal~ihln~~qe~~~p~Gd------~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~--s~e~ 222 (365)
T 3sr7_A 154 DKPYQ--AGLQAVRDLQPLFLQVHINLMQELLMPEGE------REFRSWKKHLSDYAKKLQLPFILKE-VGFGM--DVKT 222 (365)
T ss_dssp TSCHH--HHHHHHHHHCCSCEEEEECHHHHHTSSSSC------CCCHHHHHHHHHHHHHCCSCEEEEE-CSSCC--CHHH
T ss_pred CCCHH--HHHHHHHhcCCCEEEEeccccccccCCCCC------CcHHHHHHHHHHHHHhhCCCEEEEE-CCCCC--CHHH
Confidence 54432 456666677889777766543222222122 3445577889999998999999994 45432 2222
Q ss_pred HHHHHHHHhhcCCccEEEEccCc--ccc-----cC--CCC-CCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRK--ALL-----NG--ISP-AENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt--~~~-----~G--~~~-~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
++.+.++|+|+|+|+|+. ... .. ... .+| .+++ ...+..+.....++|||++|||.++.|+.
T Consensus 223 -----A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~-g~pt--~~~L~~v~~~~~~ipvia~GGI~~g~Dv~ 294 (365)
T 3sr7_A 223 -----IQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQW-GQTT--AQVLLNAQPLMDKVEILASGGIRHPLDII 294 (365)
T ss_dssp -----HHHHHHHTCCEEECCCBC--------------CGGGTTC-SCBH--HHHHHHHGGGTTTSEEEECSSCCSHHHHH
T ss_pred -----HHHHHHcCCCEEEEeCCCCcccchhhccccccccccccc-cccH--HHHHHHHHHhcCCCeEEEeCCCCCHHHHH
Confidence 344567999999997652 110 00 000 011 1222 44555443222379999999999999999
Q ss_pred HHHHcCCCeeeehHHHHh
Q 013784 284 AALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 284 ~~l~~Gad~VmiGRa~l~ 301 (436)
+++.+|||+||+||+++.
T Consensus 295 KaLalGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 295 KALVLGAKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHTCSEEEESHHHHH
T ss_pred HHHHcCCCEEEECHHHHH
Confidence 999999999999997754
No 50
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.70 E-value=1.1e-16 Score=163.11 Aligned_cols=208 Identities=12% Similarity=0.026 Sum_probs=133.4
Q ss_pred CCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEE--EEEc--------
Q 013784 63 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIV--LQIG-------- 132 (436)
Q Consensus 63 ~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~--vQL~-------- 132 (436)
+.+.++.|||+|||.++|+..+..++.+.||.|.+.. +.+++.+....++.+++.. .--..||. ++|+
T Consensus 37 ~~l~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~-~~~~e~~~~~i~~vk~~~~-g~~~~P~~~~~nL~~~~~~~~~ 114 (400)
T 3ffs_A 37 KNVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVKNWIS-NLEKNESTPDQNLDKESTDGKD 114 (400)
T ss_dssp SSCEESSSEEECSCTTTCSSHHHHHHHTTTCEEEECS-SSCHHHHHHHHHHHHCCC------------------------
T ss_pred cccCCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCC-CCCHHHHHHHHHHHHhhcc-CcccCCCCccccccCCCCCHHH
Confidence 6789999999999999999999999999999998875 6666655443322222100 00012333 3332
Q ss_pred ----------------------------CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHH
Q 013784 133 ----------------------------GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGE 184 (436)
Q Consensus 133 ----------------------------g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~e 184 (436)
..+ .+.++.+.++|+|.|.++.+. | .++.+.+
T Consensus 115 ~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~-----------G-----~~~~~~e 174 (400)
T 3ffs_A 115 TKSNNNIDAYSNENLDNKGRLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH-----------G-----HSLNIIR 174 (400)
T ss_dssp --------CCTTCCBCTTSSBCCEEEECCC-----CHHHHHHHHHTCSEEEECCSC-----------C-----SBHHHHH
T ss_pred HHHHHHhhhCcchhhccccceeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCC-----------C-----CcccHHH
Confidence 111 345666677799999887431 1 3456778
Q ss_pred HHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc
Q 013784 185 AMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD 264 (436)
Q Consensus 185 iv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~ 264 (436)
+++.+++.+++||.++.- .+.++ ++.++++|+|+|.+. -+....+.. ..........+..+.++++.
T Consensus 175 ~I~~ik~~~~i~Vi~g~V------~t~e~-----A~~a~~aGAD~I~vG-~g~Gs~~~t-r~~~g~g~p~~~al~~v~~~ 241 (400)
T 3ffs_A 175 TLKEIKSKMNIDVIVGNV------VTEEA-----TKELIENGADGIKVG-IGPGSICTT-RIVAGVGVPQITAIEKCSSV 241 (400)
T ss_dssp HHHHHHTTCCCEEEEEEE------CSHHH-----HHHHHHTTCSEEEEC-C----------CCSCBCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEeec------CCHHH-----HHHHHHcCCCEEEEe-CCCCcCccc-ccccccchhHHHHHHHHHHH
Confidence 888898888899887522 23332 334567999999993 221000000 00001112236667666543
Q ss_pred C--CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 265 F--PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 265 ~--~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
. .++|||++|||.+++|+.++++.|||+||+||+++..+.-
T Consensus 242 ~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vGt~f~~t~Es 284 (400)
T 3ffs_A 242 ASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEES 284 (400)
T ss_dssp HTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEECGGGTTBTTS
T ss_pred HHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEChHHhcCCCC
Confidence 1 3899999999999999999999999999999999988754
No 51
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.69 E-value=1.6e-16 Score=159.84 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=137.0
Q ss_pred cCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHH
Q 013784 62 VARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAK 141 (436)
Q Consensus 62 i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~ 141 (436)
+.++.++.||++|||.++++..++.++.++||.|.+- .+.+.+.+....++. ...+.+.+. +++...+
T Consensus 36 l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~-~~~s~ee~~~~i~~~---------~~~~~~~~g--~~~~~~e 103 (361)
T 3r2g_A 36 LGKLTLNLPVISANMDTITESNMANFMHSKGAMGALH-RFMTIEENIQEFKKC---------KGPVFVSVG--CTENELQ 103 (361)
T ss_dssp TSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCC-SCSCHHHHHHHHHTC---------CSCCBEEEC--SSHHHHH
T ss_pred ECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEe-CCCCHHHHHHHHhhc---------ceEEEEEcC--CCHHHHH
Confidence 6889999999999999999999999999999877654 345555554332221 123334443 3345567
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
.++.+.++|+|.|.++..+.. ++.+.++++.+++.. ++||.+|-- .+.++ ++
T Consensus 104 ~~~~a~~aGvdvI~id~a~G~----------------~~~~~e~I~~ir~~~~~~~Vi~G~V------~T~e~-----A~ 156 (361)
T 3r2g_A 104 RAEALRDAGADFFCVDVAHAH----------------AKYVGKTLKSLRQLLGSRCIMAGNV------ATYAG-----AD 156 (361)
T ss_dssp HHHHHHHTTCCEEEEECSCCS----------------SHHHHHHHHHHHHHHTTCEEEEEEE------CSHHH-----HH
T ss_pred HHHHHHHcCCCEEEEeCCCCC----------------cHhHHHHHHHHHHhcCCCeEEEcCc------CCHHH-----HH
Confidence 788888999999999864421 235678888898875 789988621 23333 33
Q ss_pred HhhcCCccEEEE--ccCcc----cccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeee
Q 013784 221 VSSLSPTRHFII--HSRKA----LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 221 ~~e~~Gvd~I~v--hgrt~----~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vm 294 (436)
.+.++|+|+|.| |+... ...|. .++ .+..+.++++.. . |||++|||.++.|+.++++.|||+||
T Consensus 157 ~a~~aGaD~I~Vg~g~G~~~~tr~~~g~------g~p--~l~aI~~~~~~~-~-PVIAdGGI~~~~di~kALa~GAd~V~ 226 (361)
T 3r2g_A 157 YLASCGADIIKAGIGGGSVCSTRIKTGF------GVP--MLTCIQDCSRAD-R-SIVADGGIKTSGDIVKALAFGADFVM 226 (361)
T ss_dssp HHHHTTCSEEEECCSSSSCHHHHHHHCC------CCC--HHHHHHHHTTSS-S-EEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHcCCCEEEEcCCCCcCccccccCCc------cHH--HHHHHHHHHHhC-C-CEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 456799999998 32110 00111 112 366676665543 3 99999999999999999999999999
Q ss_pred ehHHHHhCCcc
Q 013784 295 VGRAAYQNPWY 305 (436)
Q Consensus 295 iGRa~l~~P~l 305 (436)
+||+++....-
T Consensus 227 iGr~f~~t~Es 237 (361)
T 3r2g_A 227 IGGMLAGSAPT 237 (361)
T ss_dssp ESGGGTTBTTS
T ss_pred EChHHhCCccC
Confidence 99999987643
No 52
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.68 E-value=2.1e-16 Score=158.23 Aligned_cols=254 Identities=13% Similarity=0.179 Sum_probs=165.0
Q ss_pred cCCeecCCcEEEcCCCCC----C--hHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCC-
Q 013784 62 VARQYLPPWFSVAPMMDW----T--DNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGS- 134 (436)
Q Consensus 62 i~~l~l~n~iilAPMagv----t--d~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~- 134 (436)
+=+..+.-||.+||++.. . +....+.|.++| .-.+.+-+-+. .++.+.... .+.|...||.-.
T Consensus 63 llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~g-i~~~lSt~ss~--------s~e~v~~~~-~~~~~wfQlY~~~ 132 (352)
T 3sgz_A 63 IQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEAN-ICYVISSYASY--------SLEDIVAAA-PEGFRWFQLYMKS 132 (352)
T ss_dssp ETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHT-CEEEECTTCSS--------CHHHHHHHS-TTCEEEEECCCCS
T ss_pred ECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcC-CCeEeCCCCCC--------CHHHHHHhc-cCccceeccccCC
Confidence 557888999999998753 2 455666677775 44443333221 112221111 246889999744
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCC--------------Cc--------ccc---ccCChHHHHHHHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHG--------------CF--------GVS---LMLDPKFVGEAMSVI 189 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g--------------~y--------G~~---Ll~~~~~l~eiv~av 189 (436)
|.+...+..++++++|+..|=+..-.|..-...+| .+ ++. -.-++.+.-+.++.+
T Consensus 133 d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~l 212 (352)
T 3sgz_A 133 DWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLL 212 (352)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHH
Confidence 56666778899999999988777666653110000 00 011 123566667889999
Q ss_pred hhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccC--cccccCCCCCCCCCCCCccHHHHHHHHhcCC-
Q 013784 190 AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KALLNGISPAENRTIPPLKYEYYYALLRDFP- 266 (436)
Q Consensus 190 ~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr--t~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~- 266 (436)
++.+++||.+|... +.++ ++.++++|+|+|+|++. +.... .+..++.+.++++.+.
T Consensus 213 r~~~~~PvivK~v~------~~e~-----A~~a~~~GaD~I~vsn~GG~~~d~----------~~~~~~~L~~i~~av~~ 271 (352)
T 3sgz_A 213 QSITRLPIILKGIL------TKED-----AELAMKHNVQGIVVSNHGGRQLDE----------VSASIDALREVVAAVKG 271 (352)
T ss_dssp HHHCCSCEEEEEEC------SHHH-----HHHHHHTTCSEEEECCGGGTSSCS----------SCCHHHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEecC------cHHH-----HHHHHHcCCCEEEEeCCCCCccCC----------CccHHHHHHHHHHHhCC
Confidence 99999999999763 2222 34556799999999653 32111 2334788888776542
Q ss_pred CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHHHhcCCCc
Q 013784 267 DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTYGNNR 346 (436)
Q Consensus 267 ~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 346 (436)
++|||++|||.++.|+.+++.+|||+|||||+++..... .|. ....++++.+.+.++..+...|.
T Consensus 272 ~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~---------~G~----~gv~~~l~~l~~el~~~m~~~G~-- 336 (352)
T 3sgz_A 272 KIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLAC---------KGE----DGVKEVLDILTAELHRCMTLSGC-- 336 (352)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHH---------HHH----HHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHh---------cCc----HHHHHHHHHHHHHHHHHHHHhCC--
Confidence 799999999999999999999999999999987744321 111 12234455555555666777785
Q ss_pred hHHHHHHHHHHHhhc
Q 013784 347 PHVRDVMKPLLHFFH 361 (436)
Q Consensus 347 ~~~~~~~k~~~~y~~ 361 (436)
..+.++++++.||.+
T Consensus 337 ~~i~el~~~~~~y~k 351 (352)
T 3sgz_A 337 QSVAEISPDLIQFSR 351 (352)
T ss_dssp SBGGGCCGGGBSSCC
T ss_pred CcHHHHhhhcchhcc
Confidence 247788888888864
No 53
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.64 E-value=8.5e-16 Score=155.09 Aligned_cols=203 Identities=11% Similarity=-0.001 Sum_probs=133.3
Q ss_pred CCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEc-CCCHHHHHH
Q 013784 63 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIG-GSNLDNLAK 141 (436)
Q Consensus 63 ~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~-g~~p~~~~~ 141 (436)
..+.++.||++|||.++|+..+...+.+.||.|++... .+++.+....++.++. .++.+++. +.++ ++.+
T Consensus 41 ~~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~-~s~e~~~~~i~~vk~~-------~~l~vga~vg~~~-~~~~ 111 (366)
T 4fo4_A 41 KNIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKN-MSIEQQAAQVHQVKIS-------GGLRVGAAVGAAP-GNEE 111 (366)
T ss_dssp TTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSS-SCHHHHHHHHHHHHTT-------TSCCCEEECCSCT-TCHH
T ss_pred cccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecC-CCHHHHHHHHHHHHhc-------CceeEEEEeccCh-hHHH
Confidence 57889999999999999999999999999998877543 3344333222222221 33444443 2222 2345
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
.++.+.++|+|.|.||... | +++.+.+.++.+++.+ ++||.+..- .+.++ ++
T Consensus 112 ~~~~lieaGvd~I~idta~-----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v------~t~e~-----A~ 164 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSSH-----------G-----HSEGVLQRIRETRAAYPHLEIIGGNV------ATAEG-----AR 164 (366)
T ss_dssp HHHHHHHTTCSEEEEECSC-----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHH-----HH
T ss_pred HHHHHHhCCCCEEEEeCCC-----------C-----CCHHHHHHHHHHHHhcCCCceEeeee------CCHHH-----HH
Confidence 5677788899999998421 1 3456778888888876 778766421 23333 23
Q ss_pred HhhcCCccEEEEccCcccccCCC-C-CCCCCCCCccHHHHHHHHhc--CCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 221 VSSLSPTRHFIIHSRKALLNGIS-P-AENRTIPPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~-~-~~~~~i~~~~~~~v~~l~~~--~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.++++|+|+|.+ |... |.. . ..........+..+.++.+. ..++|||+.|||.+++|+.++++.|||+||+|
T Consensus 165 ~a~~aGAD~I~v-G~gp---Gs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 165 ALIEAGVSAVKV-GIGP---GSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HHHHHTCSEEEE-CSSC---STTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHcCCCEEEE-ecCC---CCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 345789999999 3211 100 0 00000111235666665531 23899999999999999999999999999999
Q ss_pred HHHHhCCcc
Q 013784 297 RAAYQNPWY 305 (436)
Q Consensus 297 Ra~l~~P~l 305 (436)
+.++..+.-
T Consensus 241 s~f~~t~Es 249 (366)
T 4fo4_A 241 SMFAGTEEA 249 (366)
T ss_dssp TTTTTBTTS
T ss_pred hHhhcCCCC
Confidence 999987664
No 54
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=1.2e-14 Score=148.34 Aligned_cols=214 Identities=11% Similarity=0.047 Sum_probs=136.5
Q ss_pred ccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccch---------hhhhccc-------------------
Q 013784 61 MVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAE---------TIIYQQG------------------- 112 (436)
Q Consensus 61 ~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~---------~l~~~~~------------------- 112 (436)
++.++.+++||++|||+++++..++.++.+.|+.|++.|||+... .+.....
T Consensus 60 ~l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~ 139 (393)
T 2qr6_A 60 HIDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPL 139 (393)
T ss_dssp EETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EEcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccC
Confidence 468999999999999999999999999999999999999773221 1110000
Q ss_pred ---chhhhh-ccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHH
Q 013784 113 ---NLDRFL-AFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSV 188 (436)
Q Consensus 113 ---~~~~~~-~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~a 188 (436)
....++ +..+.+.++++.+.+.+..+ .++.+.+.|+|.+.++ +.+.. ..|+..-. . ..+ +..
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e---~a~~~~~agad~i~i~-~~~~~-----~~~~~~~~-~---~~~-i~~ 205 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVRE---IAPIVIKAGADLLVIQ-GTLIS-----AEHVNTGG-E---ALN-LKE 205 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHH---HHHHHHHTTCSEEEEE-CSSCC-----SSCCCC---------C-HHH
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHH---HHHHHHHCCCCEEEEe-CCccc-----cccCCCcc-c---HHH-HHH
Confidence 000011 11223668888888765544 3455567899999887 33321 11222100 1 122 456
Q ss_pred HhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc----
Q 013784 189 IAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD---- 264 (436)
Q Consensus 189 v~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~---- 264 (436)
+++.+++||.+| |.. +.++ ++.+.++|+|+|.| |+. |.+...-....+..++.+.++++.
T Consensus 206 l~~~~~~pvi~g---gi~---t~e~-----a~~~~~~Gad~i~v-g~G----g~~~~~~~~~g~~~~~~l~~v~~~~~~~ 269 (393)
T 2qr6_A 206 FIGSLDVPVIAG---GVN---DYTT-----ALHMMRTGAVGIIV-GGG----ENTNSLALGMEVSMATAIADVAAARRDY 269 (393)
T ss_dssp HHHHCSSCEEEE---CCC---SHHH-----HHHHHTTTCSEEEE-SCC----SCCHHHHTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEC---CcC---CHHH-----HHHHHHcCCCEEEE-CCC----cccccccCCCCCChHHHHHHHHHHHHHh
Confidence 666679999985 322 3333 23345699999999 541 100000000112236666665544
Q ss_pred ---CC--CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 265 ---FP--DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 265 ---~~--~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+. ++|||++|||.+++|+.+++.+|||+||+||+++..+.
T Consensus 270 ~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 270 LDETGGRYVHIIADGSIENSGDVVKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEEEECGGGGGSTT
T ss_pred HhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCCC
Confidence 32 29999999999999999999999999999999999885
No 55
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.60 E-value=1.6e-15 Score=143.50 Aligned_cols=183 Identities=11% Similarity=0.107 Sum_probs=123.4
Q ss_pred EEcCCCCCChHHHHHHHH---HcCCCcE--EEeccccc-hhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHH
Q 013784 72 SVAPMMDWTDNHYRTLAR---LISKHAW--LYTEMLAA-ETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATEL 145 (436)
Q Consensus 72 ilAPMagvtd~~fr~~~~---~~Gg~gl--~~temv~~-~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~ 145 (436)
.+.|+ .|+.++|.+|+ ++| ++. ++.+|+.. ..... .. ++... .+.|+++|++++.+ .-++.
T Consensus 12 ~l~p~--~t~~~i~~l~~~a~~~g-~~~v~v~~~~v~~~~~~l~---~v-~v~~v--~~~P~g~~~~~~k~----~~~~~ 78 (225)
T 1mzh_A 12 ALKPH--LSEKEIEEFVLKSEELG-IYAVCVNPYHVKLASSIAK---KV-KVCCV--IGFPLGLNKTSVKV----KEAVE 78 (225)
T ss_dssp ECCTT--CCHHHHHHHHHHHHHTT-CSEEEECGGGHHHHHHHCS---SS-EEEEE--ESTTTCCSCHHHHH----HHHHH
T ss_pred ccCCC--CCHHHHHHHHHHHHHhC-CeEEEECHHHHHHHHHHhc---CC-ceeeE--ecCCCCccchhhhH----HHHHH
Confidence 46777 69999999997 564 776 45667654 23322 11 11111 24566666554433 33466
Q ss_pred HHHCCCCEEE--ecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHH
Q 013784 146 ANAYNYDEIN--LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 146 ~~~~G~d~Id--LN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~ 220 (436)
+.+.|+|+|| +|+|| .+.+ +.+.+.+.++++++.++ |+.+|+ +.++++ +++.+ +++
T Consensus 79 A~~~Gad~Id~viN~g~-----~~~~--------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~----~~~~~-~a~ 139 (225)
T 1mzh_A 79 AVRDGAQELDIVWNLSA-----FKSE--------KYDFVVEELKEIFRETP-SAVHKVIVETPYLNE----EEIKK-AVE 139 (225)
T ss_dssp HHHTTCSEEEEECCHHH-----HHTT--------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCH----HHHHH-HHH
T ss_pred HHHcCCCEEEEEecHHH-----HhcC--------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCH----HHHHH-HHH
Confidence 7788999999 89999 2222 34667777999999888 999999 766643 23333 466
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
+++++|+|+|.. ++..+.| + ..++.++.+++... ++||+++|||.|++|+.+++++|||.|.++++
T Consensus 140 ~a~eaGad~I~t--stg~~~g--g--------a~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 140 ICIEAGADFIKT--STGFAPR--G--------TTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp HHHHHTCSEEEC--CCSCSSS--C--------CCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHhCCCEEEE--CCCCCCC--C--------CCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 778899999933 3321111 1 23777777766532 79999999999999999999999998777765
No 56
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.54 E-value=5.7e-14 Score=141.27 Aligned_cols=203 Identities=11% Similarity=0.032 Sum_probs=131.5
Q ss_pred CCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 63 ARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 63 ~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
.++.++.||++|||++.++..+...+.+.||.|.+...+ +.+......++.... -.++.+.+ |..++++.++
T Consensus 52 ~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~-s~e~~~~~i~~~p~~------l~~v~~~~-g~~~~~~~~~ 123 (351)
T 2c6q_A 52 KQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHY-SLVQWQEFAGQNPDC------LEHLAASS-GTGSSDFEQL 123 (351)
T ss_dssp CCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTC-CHHHHHHHHHHCGGG------CTTEEEEE-CSSHHHHHHH
T ss_pred cCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCC-CHHHHHHHHhhCchh------hheeEeec-CCChHHHHHH
Confidence 388999999999999999999999999999888775543 323222211110111 13477776 4556666665
Q ss_pred HHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 143 TELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 143 A~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
..+++. .|+|.|.++... | ++..+.+.++.+++.. ++||.+|.-. +.++ ++
T Consensus 124 ~~l~~~~~g~~~i~i~~~~-----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~------t~e~-----A~ 176 (351)
T 2c6q_A 124 EQILEAIPQVKYICLDVAN-----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVV------TGEM-----VE 176 (351)
T ss_dssp HHHHHHCTTCCEEEEECSC-----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEEC------SHHH-----HH
T ss_pred HHHHhccCCCCEEEEEecC-----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCC------CHHH-----HH
Confidence 555543 388988876421 2 3455778889999888 8898876422 2333 33
Q ss_pred HhhcCCccEEEEccCcc-cccCCCCCCCCCCCCccHHHHHHH---HhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 221 VSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~~~~v~~l---~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.+.++|+|+|.|..... ...+. ..+...++. ...+.++ ++.. ++|||+.|||.++.|+.+++..|||+||+|
T Consensus 177 ~a~~aGaD~I~v~~g~G~~~~~r-~~~g~~~p~--~~~l~~v~~~~~~~-~ipvIa~GGI~~g~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 177 ELILSGADIIKVGIGPGSVCTTR-KKTGVGYPQ--LSAVMECADAAHGL-KGHIISDGGCSCPGDVAKAFGAGADFVMLG 252 (351)
T ss_dssp HHHHTTCSEEEECSSCSTTBCHH-HHHCBCCCH--HHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHhCCCEEEECCCCCcCcCcc-ccCCCCccH--HHHHHHHHHHHhhc-CCcEEEeCCCCCHHHHHHHHHcCCCceecc
Confidence 45679999998842110 00000 000001122 3333333 3333 799999999999999999999999999999
Q ss_pred HHHHhCCc
Q 013784 297 RAAYQNPW 304 (436)
Q Consensus 297 Ra~l~~P~ 304 (436)
|.++..+.
T Consensus 253 ~~fl~~~E 260 (351)
T 2c6q_A 253 GMLAGHSE 260 (351)
T ss_dssp TTTTTBTT
T ss_pred HHHhcCcc
Confidence 99987544
No 57
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.50 E-value=1.6e-13 Score=144.00 Aligned_cols=129 Identities=11% Similarity=0.039 Sum_probs=90.6
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
+.++.+.++|+|.|.||..||.. +.+.++++.+++.+ ++||.++-- .+.+. +
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g~~----------------~~~~~~i~~ir~~~p~~~Vi~g~v------~t~e~-----a 286 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHGHS----------------EGVLQRIRETRAAYPHLEIIGGNV------ATAEG-----A 286 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTS----------------HHHHHHHHHHHHHCTTCCEEEEEE------CSHHH-----H
T ss_pred HHHHHHHhccCceEEeccccccc----------------hHHHHHHHHHHHHCCCceEEEccc------CcHHH-----H
Confidence 44555567799999999888632 34778889998887 789877321 22322 2
Q ss_pred HHhhcCCccEEEEccC------cccccCCCCCCCCCCCCccHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHHHcCCC
Q 013784 220 KVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYALLRDF--PDLTFTLNGGINTVDEVNAALRKGAH 291 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgr------t~~~~G~~~~~~~~i~~~~~~~v~~l~~~~--~~iPVIanGgI~s~~da~~~l~~Gad 291 (436)
+.+.++|+|+|.+.+. +....|. +...+..+.++++.. .++|||++|||.+++|+.++++.|||
T Consensus 287 ~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~--------g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd 358 (496)
T 4fxs_A 287 RALIEAGVSAVKVGIGPGSICTTRIVTGV--------GVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGAS 358 (496)
T ss_dssp HHHHHHTCSEEEECSSCCTTBCHHHHHCC--------CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHhCCCEEEECCCCCcCcccccccCC--------CccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCC
Confidence 3445799999998532 1111121 112366666665421 27999999999999999999999999
Q ss_pred eeeehHHHHhCCc
Q 013784 292 HVMVGRAAYQNPW 304 (436)
Q Consensus 292 ~VmiGRa~l~~P~ 304 (436)
+||+||+++....
T Consensus 359 ~V~iGs~f~~t~E 371 (496)
T 4fxs_A 359 CVMVGSMFAGTEE 371 (496)
T ss_dssp EEEESTTTTTBTT
T ss_pred eEEecHHHhcCCC
Confidence 9999999987653
No 58
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.48 E-value=2.2e-13 Score=142.82 Aligned_cols=129 Identities=14% Similarity=0.087 Sum_probs=90.7
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
+.++.+.++|+|.|.||.+|+. ++.+.++++.+++.+ ++||.++-- .+.++ +
T Consensus 232 ~~a~~l~~aG~d~I~id~a~g~----------------~~~~~~~v~~i~~~~p~~~Vi~g~v------~t~e~-----a 284 (490)
T 4avf_A 232 ERVAALVAAGVDVVVVDTAHGH----------------SKGVIERVRWVKQTFPDVQVIGGNI------ATAEA-----A 284 (490)
T ss_dssp HHHHHHHHTTCSEEEEECSCCS----------------BHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH-----H
T ss_pred HHHHHHhhcccceEEecccCCc----------------chhHHHHHHHHHHHCCCceEEEeee------CcHHH-----H
Confidence 4445556779999999987764 245778888888887 788877421 22332 3
Q ss_pred HHhhcCCccEEEEccC------cccccCCCCCCCCCCCCccHHHHHHHHhcC--CCcEEEEeCCCCCHHHHHHHHHcCCC
Q 013784 220 KVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYALLRDF--PDLTFTLNGGINTVDEVNAALRKGAH 291 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgr------t~~~~G~~~~~~~~i~~~~~~~v~~l~~~~--~~iPVIanGgI~s~~da~~~l~~Gad 291 (436)
+.+.++|+|+|.+-.. +....|. +...+..+.++++.. .++|||++|||.+++|+.++++.|||
T Consensus 285 ~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~--------g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd 356 (490)
T 4avf_A 285 KALAEAGADAVKVGIGPGSICTTRIVAGV--------GVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAY 356 (490)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHTCB--------CCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECCCCCcCCCccccCCC--------CccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 3456799999998321 1111111 122366666665532 27999999999999999999999999
Q ss_pred eeeehHHHHhCCc
Q 013784 292 HVMVGRAAYQNPW 304 (436)
Q Consensus 292 ~VmiGRa~l~~P~ 304 (436)
+||+||+++....
T Consensus 357 ~V~vGs~~~~~~E 369 (490)
T 4avf_A 357 CVMMGSMFAGTEE 369 (490)
T ss_dssp EEEECTTTTTBTT
T ss_pred eeeecHHHhcCCC
Confidence 9999999988654
No 59
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=1.7e-13 Score=134.65 Aligned_cols=155 Identities=19% Similarity=0.269 Sum_probs=106.1
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC------------
Q 013784 140 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD------------ 207 (436)
Q Consensus 140 ~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~------------ 207 (436)
.+.|+.+++.|+++|...+ |.++..+..+ |+++|++|+.+.+|.++ +++||..|.|+||.+
T Consensus 27 ~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~-G~arm~~p~~i~~I~~a----v~iPV~~K~rig~~~e~qilea~GaD~ 99 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALE--RVPADIRAAG-GVARMSDPALIEEIMDA----VSIPVMAKCRIGHTTEALVLEAIGVDM 99 (330)
T ss_dssp HHHHHHHHHHTCSEEEECS--SCHHHHC--C-CCCCCCCHHHHHHHHHH----CSSCEEEEEETTCHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEecC--CccccccCCc-chhhcCCHHHHHHHHHh----cCCCeEEEEeecchHHHHHHHHcCCCE
Confidence 4578888899999994432 8888888887 99999999999998754 589999999999831
Q ss_pred -----------C-Cc-------------HHHHHHHHHHHhhcCCccEEEEcc--------------Cc------------
Q 013784 208 -----------H-DS-------------YNQLCDFIYKVSSLSPTRHFIIHS--------------RK------------ 236 (436)
Q Consensus 208 -----------~-~~-------------~~~~~~~la~~~e~~Gvd~I~vhg--------------rt------------ 236 (436)
. .. ..++-+.+.++ +.|+++|.+|| |+
T Consensus 100 Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~--~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~ 177 (330)
T 2yzr_A 100 IDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI--WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMT 177 (330)
T ss_dssp EEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH--HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSC
T ss_pred EehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH--hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCC
Confidence 0 00 00123333333 57999999999 44
Q ss_pred c--ccc-----CC------------CCCCCCCC--CCc------------cHHHHHHHHhcCCCcEE--EEeCCCCCHHH
Q 013784 237 A--LLN-----GI------------SPAENRTI--PPL------------KYEYYYALLRDFPDLTF--TLNGGINTVDE 281 (436)
Q Consensus 237 ~--~~~-----G~------------~~~~~~~i--~~~------------~~~~v~~l~~~~~~iPV--IanGgI~s~~d 281 (436)
. .+. |. .+..++.+ ++. .++++.++.+.. ++|| |++|||.++++
T Consensus 178 ~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~-~IPVV~VAeGGI~Tped 256 (330)
T 2yzr_A 178 DEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG-RLPVVNFAAGGVATPAD 256 (330)
T ss_dssp HHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT-SCSSEEEECSCCCSHHH
T ss_pred HHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC-CCCeEEEEECCCCCHHH
Confidence 0 000 00 00011111 111 126677776654 7898 69999999999
Q ss_pred HHHHHHcCCCeeeehHHHHhCCc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+.++++.|||+|+|||+++..++
T Consensus 257 a~~~l~~GaDgV~VGsaI~~a~d 279 (330)
T 2yzr_A 257 AALMMQLGSDGVFVGSGIFKSEN 279 (330)
T ss_dssp HHHHHHTTCSCEEESHHHHTSSC
T ss_pred HHHHHHcCcCEEeeHHHHhcCCC
Confidence 99999999999999999995443
No 60
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.43 E-value=7.3e-13 Score=157.44 Aligned_cols=202 Identities=12% Similarity=0.036 Sum_probs=141.9
Q ss_pred CCcEEEcCCC-CCChHHHHHHHHHcCCCcEE-EeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHH---HHHHH
Q 013784 68 PPWFSVAPMM-DWTDNHYRTLARLISKHAWL-YTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLD---NLAKA 142 (436)
Q Consensus 68 ~n~iilAPMa-gvtd~~fr~~~~~~Gg~gl~-~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~---~~~~a 142 (436)
+.||++|||. ++++..+..++.++||.|.+ ...+.+++.+....+++++. .+.++|+++|++..+|+ ++.+.
T Consensus 582 ~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~---~~~~~p~gvN~~~~~p~~~~~~~~~ 658 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKA---IPPGRGITVNLIYVNPRAMGWQIPL 658 (2060)
T ss_dssp SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGG---SCTTCCEEEEEETTCTTHHHHHHHH
T ss_pred cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhh---cccCCCeEecccccCcccchhHHHH
Confidence 7899999999 79999999999999999987 56667777665554444443 22378999999987664 35567
Q ss_pred HHHHHHCCCCE--EEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 143 TELANAYNYDE--INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 143 A~~~~~~G~d~--IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
.+.+.+.|++. |.+..|.|.. +.+.++++ +. ++++... -.+. .+..+.+.
T Consensus 659 ~~~~~~~gv~i~gv~~~~G~p~~----------------e~~~~~l~---~~-gi~~i~~-v~~~------~~a~~~v~- 710 (2060)
T 2uva_G 659 LGRLRADGVPIEGLTIGAGVPSI----------------EVANEYIQ---TL-GIRHISF-KPGS------VDAIQQVI- 710 (2060)
T ss_dssp HHHHHTTTCCEEEEEEESSCCCH----------------HHHHHHHH---HS-CCSEEEE-CCCS------HHHHHHHH-
T ss_pred HHHHHHcCCCcceEeecCCCCCH----------------HHHHHHHH---Hc-CCeEEEe-cCCH------HHHHHHHH-
Confidence 77888889988 8887776631 22333333 32 7776532 2221 22222222
Q ss_pred HhhcCCccEEE---EccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH-----------
Q 013784 221 VSSLSPTRHFI---IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL----------- 286 (436)
Q Consensus 221 ~~e~~Gvd~I~---vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l----------- 286 (436)
.+.++|+|.|+ ++|..+ +|..+.+ .+...-+.++.++++.+ ++|||+.|||.|++++.+++
T Consensus 711 ~l~~aG~D~iV~~q~~G~ea--GGH~g~~--d~~~~~l~lv~~i~~~~-~ipviaaGGI~~g~~i~aaltg~ws~~~g~p 785 (2060)
T 2uva_G 711 NIAKANPTFPIILQWTGGRG--GGHHSFE--DFHQPILLMYSRIRKCS-NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYP 785 (2060)
T ss_dssp HHHHHCTTSCEEEEECCTTS--SSSCCSC--CSHHHHHHHHHHHHTST-TEEEEEESSCCSHHHHHHHHHTCGGGTTTSC
T ss_pred HHHHcCCCEEEEeeeEcccC--CCCCCcc--cccchHHHHHHHHHHHc-CCCEEEeCCCCCHHHHHHHhcCcchhhcCCC
Confidence 23568999999 887665 2332211 11122266777877765 89999999999999999999
Q ss_pred HcCCCeeeehHHHHhCCcc
Q 013784 287 RKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 287 ~~Gad~VmiGRa~l~~P~l 305 (436)
..|||+||+|+.++...--
T Consensus 786 alGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 786 PMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp CCCCSCEEESGGGGGBTTS
T ss_pred CCCCCEEEEchhhhcCcCC
Confidence 8999999999999987653
No 61
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.43 E-value=1.2e-13 Score=132.17 Aligned_cols=145 Identities=17% Similarity=0.238 Sum_probs=105.5
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
+.|++++++|+..|....+||... |+.+ |.+-|.+|+.+.+|. +++++||..|.|.|. + .+ ++
T Consensus 22 eqa~iae~aGa~av~~l~~~p~d~--r~~g-Gv~Rm~dp~~I~~I~----~aVsIPVm~k~righ-----~---~E--Aq 84 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPADM--RKSG-KVCRMSDPKMIKDIM----NSVSIPVMAKVRIGH-----F---VE--AQ 84 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHHH--HTTT-CCCCCCCHHHHHHHH----TTCSSCEEEEEETTC-----H---HH--HH
T ss_pred HHHHHHHHhCchhhhhccCCCchh--hhcC-CccccCCHHHHHHHH----HhCCCCeEEEEecCc-----H---HH--HH
Confidence 467888999999999999999863 3444 888999999877664 556999999999975 2 22 45
Q ss_pred HhhcCCccEEEEccC-cc----------c---------------------------------------------------
Q 013784 221 VSSLSPTRHFIIHSR-KA----------L--------------------------------------------------- 238 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgr-t~----------~--------------------------------------------------- 238 (436)
++++.|+|.|.-+-+ +. .
T Consensus 85 ilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i 164 (291)
T 3o07_A 85 IIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEI 164 (291)
T ss_dssp HHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHH
Confidence 666788887755421 00 0
Q ss_pred --ccCC-CCCCC----CCCCCccHHHHHHHHhcCCCcEE--EEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 239 --LNGI-SPAEN----RTIPPLKYEYYYALLRDFPDLTF--TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 239 --~~G~-~~~~~----~~i~~~~~~~v~~l~~~~~~iPV--IanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+.|+ +..+. ..+ ..+|+++.++++. +++|| |+||||.|++|+.+++++|||+||||||++..++
T Consensus 165 ~~l~g~~t~~el~~~a~~~-~ad~elI~~Ike~-~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~D 237 (291)
T 3o07_A 165 KACQQLKSEDDIAKVAEEM-RVPVSLLKDVLEK-GKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSN 237 (291)
T ss_dssp HHHHTCCCHHHHHHHHHHH-TSCHHHHHHHHHH-TSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSC
T ss_pred HHHHcCCCHHHhhhccccc-CCCHHHHHHHHHc-cCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCC
Confidence 0011 10000 001 2348889888887 48998 5799999999999999999999999999998544
No 62
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.40 E-value=3.7e-13 Score=143.14 Aligned_cols=208 Identities=8% Similarity=-0.006 Sum_probs=131.1
Q ss_pred HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHH---------HHHHHHHHHHCCCCEE
Q 013784 84 YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDN---------LAKATELANAYNYDEI 154 (436)
Q Consensus 84 fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~---------~~~aA~~~~~~G~d~I 154 (436)
+.....+.|.-++.+.++..............+.++.-.+..++-+|++|.-.+. ..+.++.+.++|+|.|
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V 364 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKV 364 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEE
Confidence 3344455564467777766543211111111122221122345678888865431 3455666677899999
Q ss_pred EecCCCCCCccccCCCccccccCChHHHHHHHHHHhh-ccCCcEEEE--------------------------------e
Q 013784 155 NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPVSVK--------------------------------C 201 (436)
Q Consensus 155 dLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~~~iPvsvK--------------------------------i 201 (436)
.||.+|- .+..+..+ ++.++.+|+++.++.+..-+ .+-+-+.+| .
T Consensus 365 ~igt~~~-~~~~~~~~-~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~ 442 (555)
T 1jvn_A 365 SIGTDAV-YAAEKYYE-LGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCT 442 (555)
T ss_dssp EECHHHH-HHHHHHHH-TTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEE
T ss_pred EECCHHh-hCchhhcc-ccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEE
Confidence 9999882 11111111 33456889999999987632 221222222 2
Q ss_pred ccCCCCCCc--HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 202 RIGVDDHDS--YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 202 R~G~~~~~~--~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
..||..... ..++ ++.+++.|++.|++|++++. |.. -+ .+|+++.++.+.. ++|||++|||.++
T Consensus 443 ~~Gw~~~~~~~~~e~----a~~~~~~Ga~~il~t~~~~d--G~~------~G-~d~~li~~l~~~~-~iPVIasGGi~s~ 508 (555)
T 1jvn_A 443 IKGGRESRDLGVWEL----TRACEALGAGEILLNCIDKD--GSN------SG-YDLELIEHVKDAV-KIPVIASSGAGVP 508 (555)
T ss_dssp ETTTTEEEEEEHHHH----HHHHHHTTCCEEEECCGGGT--TTC------SC-CCHHHHHHHHHHC-SSCEEECSCCCSH
T ss_pred EecCccCCCCCHHHH----HHHHHHcCCCEEEEeCCCCC--CCC------CC-CCHHHHHHHHHhC-CccEEEECCCCCH
Confidence 336655322 3333 45667899999999998763 211 01 2489998988875 9999999999999
Q ss_pred HHHHHHHH-cCCCeeeehHHHHhCCcchh
Q 013784 280 DEVNAALR-KGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 280 ~da~~~l~-~Gad~VmiGRa~l~~P~lf~ 307 (436)
+|+.++++ +||++||+||+++.++|.|.
T Consensus 509 ~d~~~~~~~~G~~gvivg~a~~~~~~~~~ 537 (555)
T 1jvn_A 509 EHFEEAFLKTRADACLGAGMFHRGEFTVN 537 (555)
T ss_dssp HHHHHHHHHSCCSEEEESHHHHTTSCCHH
T ss_pred HHHHHHHHhcCChHHHHHHHHHcCCCCHH
Confidence 99999998 89999999999999999863
No 63
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.39 E-value=1.8e-12 Score=123.22 Aligned_cols=152 Identities=15% Similarity=0.215 Sum_probs=111.2
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc----CCc--
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT----NVP-- 196 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~----~iP-- 196 (436)
.+.|+.+..+-.++++ ++.+.++|+|.|-+ |+.++.+|+.+.++++...... +.+
T Consensus 73 ~~ipv~v~ggi~~~~~----~~~~l~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~ 133 (244)
T 2y88_A 73 LDVQVELSGGIRDDES----LAAALATGCARVNV---------------GTAALENPQWCARVIGEHGDQVAVGLDVQII 133 (244)
T ss_dssp CSSEEEEESSCCSHHH----HHHHHHTTCSEEEE---------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCcEEEECCCCCHHH----HHHHHHcCCCEEEE---------------CchHhhChHHHHHHHHHcCCCEEEEEecccc
Confidence 4678988888888875 33444579998744 5556678899999988875432 222
Q ss_pred ---EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 197 ---VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 197 ---vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
.+||+| ||.+... +..+. ++.+++.|++.|.+|+|+....+. + .+++.+.++.+.. ++|||++
T Consensus 134 ~~~~~v~~~-g~~~~~~--~~~e~-~~~~~~~G~~~i~~~~~~~~~~~~--------g-~~~~~~~~l~~~~-~ipvia~ 199 (244)
T 2y88_A 134 DGEHRLRGR-GWETDGG--DLWDV-LERLDSEGCSRFVVTDITKDGTLG--------G-PNLDLLAGVADRT-DAPVIAS 199 (244)
T ss_dssp TTEEEEEEG-GGTEEEE--EHHHH-HHHHHHTTCCCEEEEETTTTTTTS--------C-CCHHHHHHHHTTC-SSCEEEE
T ss_pred CCCCEEEEC-CccCCCC--CHHHH-HHHHHhCCCCEEEEEecCCccccC--------C-CCHHHHHHHHHhC-CCCEEEE
Confidence 367888 8865322 12222 234567899999999988631111 1 2488888888764 8999999
Q ss_pred CCCCCHHHHHHHHHc---CCCeeeehHHHHhCCcchh
Q 013784 274 GGINTVDEVNAALRK---GAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 274 GgI~s~~da~~~l~~---Gad~VmiGRa~l~~P~lf~ 307 (436)
|||.+++++.++++. |||+||+||+++.+||.|.
T Consensus 200 GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~ 236 (244)
T 2y88_A 200 GGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLP 236 (244)
T ss_dssp SCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHH
T ss_pred CCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHH
Confidence 999999999999986 9999999999999999853
No 64
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.4e-12 Score=125.95 Aligned_cols=183 Identities=16% Similarity=0.106 Sum_probs=121.3
Q ss_pred HHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCC
Q 013784 82 NHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCP 161 (436)
Q Consensus 82 ~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP 161 (436)
..+.....+.| +..++.-.+++ .+.+.++++. ...++-+|++|.... . ++.+++ +|+|-|-
T Consensus 41 ~~~A~~~~~~G-a~~l~vvDL~~----~n~~~i~~i~----~~~~~pv~vgGGir~-~-~~~~~l--~Ga~~Vi------ 101 (260)
T 2agk_A 41 SYYAKLYKDRD-VQGCHVIKLGP----NNDDAAREAL----QESPQFLQVGGGIND-T-NCLEWL--KWASKVI------ 101 (260)
T ss_dssp HHHHHHHHHTT-CTTCEEEEESS----SCHHHHHHHH----HHSTTTSEEESSCCT-T-THHHHT--TTCSCEE------
T ss_pred HHHHHHHHHcC-CCEEEEEeCCC----CCHHHHHHHH----hcCCceEEEeCCCCH-H-HHHHHh--cCCCEEE------
Confidence 34555567775 66666666664 1111122222 123456778887763 3 666666 8988553
Q ss_pred CCccccCCCccccccCC-----hHHHHHHHHHHh-hccCCcEEEEec---------cCCCCCC--cHH-HHHHHHHHHhh
Q 013784 162 SPKVAGHGCFGVSLMLD-----PKFVGEAMSVIA-ANTNVPVSVKCR---------IGVDDHD--SYN-QLCDFIYKVSS 223 (436)
Q Consensus 162 ~~~v~r~g~yG~~Ll~~-----~~~l~eiv~av~-~~~~iPvsvKiR---------~G~~~~~--~~~-~~~~~la~~~e 223 (436)
.|++++++ |+++.++++++. +.+-+++++|++ .||.+.. +.. ++ ++.++
T Consensus 102 ---------igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~----a~~~~ 168 (260)
T 2agk_A 102 ---------VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADT----FRELR 168 (260)
T ss_dssp ---------ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHH----HHHHT
T ss_pred ---------ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHH----HHHHH
Confidence 37777777 999999999997 444445555533 2565422 222 33 34557
Q ss_pred cCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC---CcEEEEeCCCCCHHHHHHHHHc--CCCeeeehHH
Q 013784 224 LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP---DLTFTLNGGINTVDEVNAALRK--GAHHVMVGRA 298 (436)
Q Consensus 224 ~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~---~iPVIanGgI~s~~da~~~l~~--Gad~VmiGRa 298 (436)
+. ++.|++|++++.... . ++ +|+++.++.+..+ ++|||++|||.+++|+.++++. ||++||+||+
T Consensus 169 ~~-a~~il~t~i~~dG~~-~-------G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 169 KY-TNEFLIHAADVEGLC-G-------GI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp TT-CSEEEEEC--------C-------CC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred Hh-cCEEEEEeeccccCc-C-------CC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 78 999999998863111 1 11 4899988887643 8999999999999999999984 9999999999
Q ss_pred H--HhCC-cch
Q 013784 299 A--YQNP-WYT 306 (436)
Q Consensus 299 ~--l~~P-~lf 306 (436)
+ +.+| |.|
T Consensus 239 l~l~~g~~~~~ 249 (260)
T 2agk_A 239 LDIFGGNLVKF 249 (260)
T ss_dssp BGGGTCSSBCH
T ss_pred HHHcCCCCCCH
Confidence 7 8888 875
No 65
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.30 E-value=1.7e-11 Score=129.09 Aligned_cols=127 Identities=16% Similarity=0.137 Sum_probs=87.4
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
+.++.+.++|+|.|.++..+|. .+.+.++++.+++.+ ++||.++-- .+.++ +
T Consensus 259 era~aLveaGvd~I~Id~a~g~----------------~~~v~~~i~~i~~~~~~~~vi~g~v------~t~e~-----a 311 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAHGH----------------SQGVIDKVKEVRAKYPSLNIIAGNV------ATAEA-----T 311 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSCTT----------------SHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH-----H
T ss_pred HHHHHHHhhccceEEecccccc----------------hhhhhhHHHHHHHhCCCceEEeeee------ccHHH-----H
Confidence 3455566789999999977653 234778888888876 478876521 23332 3
Q ss_pred HHhhcCCccEEEEccCc-------ccccCCCCCCCCCCCCccHHHHHHH---HhcCCCcEEEEeCCCCCHHHHHHHHHcC
Q 013784 220 KVSSLSPTRHFIIHSRK-------ALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNAALRKG 289 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt-------~~~~G~~~~~~~~i~~~~~~~v~~l---~~~~~~iPVIanGgI~s~~da~~~l~~G 289 (436)
+.+.++|+|+|.+ |.. ....|. +...+..+.++ ++.. ++|||+.|||.+++|+.++++.|
T Consensus 312 ~~~~~aGad~i~v-g~g~gsi~~~~~~~g~--------g~p~~~~l~~v~~~~~~~-~iPVIa~GGI~~~~di~kala~G 381 (511)
T 3usb_A 312 KALIEAGANVVKV-GIGPGSICTTRVVAGV--------GVPQLTAVYDCATEARKH-GIPVIADGGIKYSGDMVKALAAG 381 (511)
T ss_dssp HHHHHHTCSEEEE-CSSCSTTCCHHHHHCC--------CCCHHHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHhCCCEEEE-CCCCccccccccccCC--------CCCcHHHHHHHHHHHHhC-CCcEEEeCCCCCHHHHHHHHHhC
Confidence 3455789999998 221 111121 11225555444 3443 79999999999999999999999
Q ss_pred CCeeeehHHHHhCCc
Q 013784 290 AHHVMVGRAAYQNPW 304 (436)
Q Consensus 290 ad~VmiGRa~l~~P~ 304 (436)
||+||+||+++....
T Consensus 382 A~~V~vGs~~~~~~e 396 (511)
T 3usb_A 382 AHVVMLGSMFAGVAE 396 (511)
T ss_dssp CSEEEESTTTTTBTT
T ss_pred chhheecHHHhcCcc
Confidence 999999999876654
No 66
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.28 E-value=2.8e-11 Score=115.00 Aligned_cols=152 Identities=16% Similarity=0.186 Sum_probs=107.4
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE--
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK-- 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK-- 200 (436)
.+.|+.+..+-.++++ ++.+.++|+|.|-+ |+.++.+|+.+.++++..-....+.++++
T Consensus 74 ~~ipv~v~ggI~~~~~----~~~~l~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g 134 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDT----LAAALATGCTRVNL---------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGT 134 (244)
T ss_dssp CSSEEEEESSCCSHHH----HHHHHHTTCSEEEE---------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETT
T ss_pred cCCcEEEECCcCCHHH----HHHHHHcCCCEEEE---------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCC
Confidence 4678988888888875 33444579888743 55566788888888887654333344443
Q ss_pred --eccCCCCCC-cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC
Q 013784 201 --CRIGVDDHD-SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN 277 (436)
Q Consensus 201 --iR~G~~~~~-~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~ 277 (436)
.+.||.+.. +..++ ++.+++.|++.|.+|++++...+. + .+++.+.++.+.. ++|||++|||.
T Consensus 135 ~v~~~g~~~~~~~~~e~----~~~~~~~G~~~i~~~~~~~~~~~~--------g-~~~~~~~~i~~~~-~ipvia~GGI~ 200 (244)
T 1vzw_A 135 TLRGRGWTRDGGDLYET----LDRLNKEGCARYVVTDIAKDGTLQ--------G-PNLELLKNVCAAT-DRPVVASGGVS 200 (244)
T ss_dssp EECCSSSCCCCCBHHHH----HHHHHHTTCCCEEEEEC---------------C-CCHHHHHHHHHTC-SSCEEEESCCC
T ss_pred EEEEcCcccCCCCHHHH----HHHHHhCCCCEEEEeccCcccccC--------C-CCHHHHHHHHHhc-CCCEEEECCCC
Confidence 245776533 23332 234467999999999877521111 1 2488888888765 89999999999
Q ss_pred CHHHHHHHHHc---CCCeeeehHHHHhCCcchh
Q 013784 278 TVDEVNAALRK---GAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 278 s~~da~~~l~~---Gad~VmiGRa~l~~P~lf~ 307 (436)
+++++.++++. |||+|++||+++.+||.+.
T Consensus 201 ~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~ 233 (244)
T 1vzw_A 201 SLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLE 233 (244)
T ss_dssp SHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHH
T ss_pred CHHHHHHHHhhccCCCceeeeeHHHHcCCCCHH
Confidence 99999999996 9999999999999999753
No 67
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.20 E-value=4.1e-11 Score=141.95 Aligned_cols=202 Identities=10% Similarity=0.034 Sum_probs=137.7
Q ss_pred CCcEEEcCCCC-CChHHHHHHHHHcCCCcEEEe-ccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHH---HHHHH
Q 013784 68 PPWFSVAPMMD-WTDNHYRTLARLISKHAWLYT-EMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLD---NLAKA 142 (436)
Q Consensus 68 ~n~iilAPMag-vtd~~fr~~~~~~Gg~gl~~t-emv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~---~~~~a 142 (436)
+.||++|||+. .+++.|..++.++||.|.+.. .+.+++.+....++.+.+ .+.++||+||+.-.+|. +..+.
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~---t~~~~~~gvN~~~~~~~~~~~~~~~ 665 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQ---IEKGSTFGINLIYVNPFMLQWGIPL 665 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHH---SCTTCCEEEEEETTCTTHHHHHHHH
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHh---cCCCCceEEEEeecChhhhhhhHHH
Confidence 47999999994 459999999999999998854 556677776555444443 34568999998876653 22366
Q ss_pred HHHHHHCCCCE--EEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHH
Q 013784 143 TELANAYNYDE--INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYK 220 (436)
Q Consensus 143 A~~~~~~G~d~--IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~ 220 (436)
.+.+.+.|+.. |.+..|-|.. +...++++.+ |+++..... | ....+.. ++
T Consensus 666 ~~~~~~~gv~i~~v~~~ag~p~~----------------~~~~~~i~~l----G~~vi~~~~-~-----~~~a~~~--~~ 717 (2051)
T 2uv8_G 666 IKELRSKGYPIQFLTIGAGVPSL----------------EVASEYIETL----GLKYLGLKP-G-----SIDAISQ--VI 717 (2051)
T ss_dssp HHHHHHTTCSEEEEEEESSCCCH----------------HHHHHHHHHS----CCSCEEECC-C-----SHHHHHH--HH
T ss_pred HHHHHHcCCCcceEEecCCCCch----------------hhHHHHHHHc----CCEEEEecC-c-----hHHHHHH--HH
Confidence 67777888776 8888776652 2234444443 777644222 1 2222222 23
Q ss_pred HhhcCCccEE---EEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH-----------
Q 013784 221 VSSLSPTRHF---IIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL----------- 286 (436)
Q Consensus 221 ~~e~~Gvd~I---~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l----------- 286 (436)
..+++|+|++ .+.|.++ +|..+. ..+...-+.++.++++.. +||||+.|||.|++++.++|
T Consensus 718 ~~~~~g~d~~ii~~~~G~ea--GGH~g~--~d~~~~~l~l~~~v~~~~-~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~ 792 (2051)
T 2uv8_G 718 NIAKAHPNFPIALQWTGGRG--GGHHSF--EDAHTPMLQMYSKIRRHP-NIMLIFGSGFGSADDTYPYLTGEWSTKFDYP 792 (2051)
T ss_dssp HHHHHSTTSCEEEEECCSSC--SEECCS--CCSSHHHHHHHHHHTTCT-TBCCEEESSCCSHHHHTHHHHTCGGGTTTCC
T ss_pred HHHHhCCCceeEEEEEccCc--CCCCCc--ccccccHHHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHccccccccCcc
Confidence 4467899993 5567765 343221 122333355677776654 99999999999999999999
Q ss_pred HcCCCeeeehHHHHhCCcc
Q 013784 287 RKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 287 ~~Gad~VmiGRa~l~~P~l 305 (436)
..|||||++|+.++....-
T Consensus 793 ~lgadGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 793 PMPFDGFLFGSRVMIAKEV 811 (2051)
T ss_dssp CCCCSCEECSGGGTTSTTS
T ss_pred CCCCceeeechHHHhCccc
Confidence 6899999999999976543
No 68
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.19 E-value=4.9e-10 Score=106.81 Aligned_cols=151 Identities=9% Similarity=0.045 Sum_probs=105.7
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhh-ccCCcE----
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPV---- 197 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~~~iPv---- 197 (436)
.+.|+++.-+-+++++. +.+.++|+|+|-+ |..++.+|+.+.++++.... ...+.+
T Consensus 73 ~~ipvi~~ggI~~~~~~----~~~~~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~ 133 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETA----SELILRGADKVSI---------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKR 133 (253)
T ss_dssp CCSCEEEESSCCSHHHH----HHHHHTTCSEEEE---------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHH----HHHHHcCCCEEEE---------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEc
Confidence 46788888777888763 3334579998733 55566788888888887642 222233
Q ss_pred -----EEEeccCCCCCC--cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEE
Q 013784 198 -----SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 270 (436)
Q Consensus 198 -----svKiR~G~~~~~--~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPV 270 (436)
.|++ .||.+.. +..+.+ +.+++.|++.|.+|+++....+. + .+++.+.++.+.. ++||
T Consensus 134 ~~g~~~v~~-~g~~~~~~~~~~e~~----~~~~~~G~~~i~~~~~~~~g~~~--------g-~~~~~~~~l~~~~-~ipv 198 (253)
T 1thf_D 134 VDGEFMVFT-YSGKKNTGILLRDWV----VEVEKRGAGEILLTSIDRDGTKS--------G-YDTEMIRFVRPLT-TLPI 198 (253)
T ss_dssp ETTEEEEEE-TTTTEEEEEEHHHHH----HHHHHTTCSEEEEEETTTTTSCS--------C-CCHHHHHHHGGGC-CSCE
T ss_pred cCCcEEEEE-CCCccccCCCHHHHH----HHHHHCCCCEEEEEeccCCCCCC--------C-CCHHHHHHHHHhc-CCCE
Confidence 3444 3565421 233322 33456899999999776421111 1 1488888887765 8999
Q ss_pred EEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 271 TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 271 IanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
|++|||.+++|+.+++++|||+|++||+++.+||.+.
T Consensus 199 ia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~~~~~ 235 (253)
T 1thf_D 199 IASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVR 235 (253)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTCSCHH
T ss_pred EEECCCCCHHHHHHHHHcCChHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999997653
No 69
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.17 E-value=1.2e-11 Score=118.10 Aligned_cols=153 Identities=15% Similarity=0.169 Sum_probs=34.2
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHh-hcc--C--Cc-
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIA-ANT--N--VP- 196 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~-~~~--~--iP- 196 (436)
.+.|+++.=+-.++++..+ +.+.|+|.| ..|..++.+|+++.++.+..- +.+ + .+
T Consensus 78 ~~ipvi~~Ggi~~~~~~~~----~l~~Gad~V---------------~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~ 138 (247)
T 3tdn_A 78 TTLPIIASGGAGKMEHFLE----AFLRGADKV---------------SINTAAVENPSLITQIAQTFGSQAVVVAIDAKR 138 (247)
T ss_dssp CCSCEEEESCCCSHHHHHH----HHHTTCSEE---------------CCSHHHHHCTHHHHHHHHHHC------------
T ss_pred CCCCEEEeCCCCCHHHHHH----HHHcCCCee---------------ehhhHHhhChHHHHHHHHHhCCCcEEEEEEecc
Confidence 3678877666677776433 335788887 237777889999888887762 221 2 22
Q ss_pred ----EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 197 ----VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 197 ----vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
..|+++ ||.+... .+..+ +++.+++.|++.|.+|+++.. |.. ...+++.+.++.+.. ++|||+
T Consensus 139 ~~~~~~v~~~-g~~~~~~-~~~~~-~a~~~~~~G~~~i~~t~~~~~--g~~-------~g~~~~~~~~i~~~~-~iPvia 205 (247)
T 3tdn_A 139 VDGEFMVFTY-SGKKNTG-ILLRD-WVVEVEKRGAGEILLTSIDRD--GTK-------SGYDTEMIRFVRPLT-TLPIIA 205 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEEC-CCcccCC-CCHHH-HHHHHHhcCCCEEEEecccCC--CCc-------CCCCHHHHHHHHHhC-CCCEEE
Confidence 234454 6654321 12222 245567799999999987642 211 011356666666654 899999
Q ss_pred eCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 273 NGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 273 nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
+|||.+++|+.++++.|||+|++||+++.+||+|.
T Consensus 206 ~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p~~~~ 240 (247)
T 3tdn_A 206 SGGAGKMEHFLEAFLRGADKVSINTAAVENPSLIT 240 (247)
T ss_dssp -----------------------------------
T ss_pred ECCCCCHHHHHHHHHcCCcHhhccHHHHcCcHHHH
Confidence 99999999999999999999999999999999863
No 70
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.17 E-value=2.2e-10 Score=120.07 Aligned_cols=132 Identities=19% Similarity=0.231 Sum_probs=92.4
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHH
Q 013784 139 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDF 217 (436)
Q Consensus 139 ~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~ 217 (436)
+.+.++.+.++|+|.|.++... | .++...++++++++.+ ++||.++-- .+.++
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~-----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~------~t~e~---- 291 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH-----------G-----HSRRVIETLEMIKADYPDLPVVAGNV------ATPEG---- 291 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEE------CSHHH----
T ss_pred HHHHHHHHHHhCCCEEEEEecC-----------C-----chHHHHHHHHHHHHHCCCceEEeCCc------CCHHH----
Confidence 4566777888999999997631 2 2456778899999887 799987521 23333
Q ss_pred HHHHhhcCCccEEEEccCcc------cccCCCCCCCCCCCCccHHHHHHHH---hcCCCcEEEEeCCCCCHHHHHHHHHc
Q 013784 218 IYKVSSLSPTRHFIIHSRKA------LLNGISPAENRTIPPLKYEYYYALL---RDFPDLTFTLNGGINTVDEVNAALRK 288 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~------~~~G~~~~~~~~i~~~~~~~v~~l~---~~~~~iPVIanGgI~s~~da~~~l~~ 288 (436)
++.++++|+|+|.+.+... ...|. ..+. +..+..+. +.. ++|||++|||.+++|+.++++.
T Consensus 292 -a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~------g~p~--~~~l~~v~~~~~~~-~ipvia~GGI~~~~di~kala~ 361 (494)
T 1vrd_A 292 -TEALIKAGADAVKVGVGPGSICTTRVVAGV------GVPQ--LTAVMECSEVARKY-DVPIIADGGIRYSGDIVKALAA 361 (494)
T ss_dssp -HHHHHHTTCSEEEECSSCSTTCHHHHHHCC------CCCH--HHHHHHHHHHHHTT-TCCEEEESCCCSHHHHHHHHHT
T ss_pred -HHHHHHcCCCEEEEcCCCCccccccccCCC------CccH--HHHHHHHHHHHhhc-CCCEEEECCcCCHHHHHHHHHc
Confidence 2345579999999943210 00111 1122 44444443 333 8999999999999999999999
Q ss_pred CCCeeeehHHHHhCCcch
Q 013784 289 GAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 289 Gad~VmiGRa~l~~P~lf 306 (436)
|||+|++||+++.+|...
T Consensus 362 GAd~V~iGr~~l~~~e~~ 379 (494)
T 1vrd_A 362 GAESVMVGSIFAGTEEAP 379 (494)
T ss_dssp TCSEEEESHHHHTBTTSS
T ss_pred CCCEEEECHHHhcCCcCC
Confidence 999999999999998874
No 71
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.16 E-value=2.3e-10 Score=110.62 Aligned_cols=198 Identities=13% Similarity=0.104 Sum_probs=126.8
Q ss_pred ecCCcEEEcCCCCCChHH-HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCH-------H
Q 013784 66 YLPPWFSVAPMMDWTDNH-YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNL-------D 137 (436)
Q Consensus 66 ~l~n~iilAPMagvtd~~-fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p-------~ 137 (436)
.++++++++||.+..+.. +...+.+.| +..+.+.. +......+ . ...+.|+++|+.+..+ +
T Consensus 31 ~id~~~~l~p~~~~~~~~~~~~~~~~~g-~~~i~~~~----~~~~~~~~--~----~~~~~~~~v~~~~~~~~~~d~~~~ 99 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLIDIRKTVNDVAEGG-ANAVLLHK----GIVRHGHR--G----YGKDVGLIIHLSGGTAISPNPLKK 99 (273)
T ss_dssp ECCHHHHHCSCTTSSSHHHHHHHHHHHT-CSEEEECH----HHHHSCCC--S----SSCCCEEEEECEECCTTSSSTTCC
T ss_pred EcccccccCCCcchhhHHHHHHHHHhcC-CCEEEeCH----HHHHHHHH--h----hcCCCCEEEEEcCCCcCCCCcccc
Confidence 367788899999998875 444456665 56655532 22221111 1 1235789999986541 1
Q ss_pred HHHHHHHHHHHCCCCEE--EecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec-cCCCC--CCcHH
Q 013784 138 NLAKATELANAYNYDEI--NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR-IGVDD--HDSYN 212 (436)
Q Consensus 138 ~~~~aA~~~~~~G~d~I--dLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR-~G~~~--~~~~~ 212 (436)
.+.+.++.+.+.|+|.| .+|.+|+.. . ...+.+.++++..++ .++|+.+.+- -|+.. ..+.+
T Consensus 100 ~~~~~v~~a~~~Ga~~v~~~l~~~~~~~------~------~~~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~~ 166 (273)
T 2qjg_A 100 VIVTTVEEAIRMGADAVSIHVNVGSDED------W------EAYRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNERDPE 166 (273)
T ss_dssp EECSCHHHHHHTTCSEEEEEEEETSTTH------H------HHHHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCHH
T ss_pred hHHHHHHHHHHcCCCEEEEEEecCCCCH------H------HHHHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCHh
Confidence 12345666778899999 778887632 1 112344555555443 4888887752 13211 01222
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC--HHH----HHHHH
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT--VDE----VNAAL 286 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s--~~d----a~~~l 286 (436)
++.+ +++.+++.|+|+|.++. +.+++.+.++++.. ++||++.|||.+ .+| +.+++
T Consensus 167 ~~~~-~a~~a~~~Gad~i~~~~-----------------~~~~~~l~~i~~~~-~ipvva~GGi~~~~~~~~~~~~~~~~ 227 (273)
T 2qjg_A 167 LVAH-AARLGAELGADIVKTSY-----------------TGDIDSFRDVVKGC-PAPVVVAGGPKTNTDEEFLQMIKDAM 227 (273)
T ss_dssp HHHH-HHHHHHHTTCSEEEECC-----------------CSSHHHHHHHHHHC-SSCEEEECCSCCSSHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHcCCCEEEECC-----------------CCCHHHHHHHHHhC-CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 3322 33566789999999872 12378888888776 899999999994 888 44555
Q ss_pred HcCCCeeeehHHHHhCCcch
Q 013784 287 RKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 287 ~~Gad~VmiGRa~l~~P~lf 306 (436)
+.||++|++||+++..||..
T Consensus 228 ~~Ga~gv~vg~~i~~~~~~~ 247 (273)
T 2qjg_A 228 EAGAAGVAVGRNIFQHDDVV 247 (273)
T ss_dssp HHTCSEEECCHHHHTSSSHH
T ss_pred HcCCcEEEeeHHhhCCCCHH
Confidence 68999999999999999863
No 72
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.14 E-value=5.6e-10 Score=117.64 Aligned_cols=136 Identities=18% Similarity=0.091 Sum_probs=95.7
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHH
Q 013784 140 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFI 218 (436)
Q Consensus 140 ~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~l 218 (436)
.+.++.+.++|+|.|+||.+|.. ++...++++++++.+ ++||.+|-- .+.++
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~----------------~~~~~~~i~~i~~~~~~~pvi~~~v------~t~~~----- 309 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN----------------SVYQIAMVHYIKQKYPHLQVIGGNV------VTAAQ----- 309 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC----------------SHHHHHHHHHHHHHCTTCEEEEEEE------CSHHH-----
T ss_pred HHHHHHHHHcCCCEEEeeccCCc----------------chhHHHHHHHHHHhCCCCceEeccc------chHHH-----
Confidence 44556677899999999987532 356778999999988 899987621 22322
Q ss_pred HHHhhcCCccEEEEccCcccccCCCC---CCCCCCC-CccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeee
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISP---AENRTIP-PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~---~~~~~i~-~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vm 294 (436)
++.++++|+|+|.+ |... +|... ......+ ...+..+.++++.+ ++|||++|||.+++|+.++++.|||+||
T Consensus 310 a~~l~~aGad~I~v-g~~~--G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 310 AKNLIDAGVDGLRV-GMGC--GSICITQEVMACGRPQGTAVYKVAEYARRF-GVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHTCSEEEE-CSSC--SCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEEE-CCCC--CcccccccccCCCccchhHHHHHHHHHhhC-CCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 33456799999999 3211 01000 0000011 12356667777765 8999999999999999999999999999
Q ss_pred ehHHHHhCCcch
Q 013784 295 VGRAAYQNPWYT 306 (436)
Q Consensus 295 iGRa~l~~P~lf 306 (436)
+||+++.+|+..
T Consensus 386 iG~~~l~~~e~~ 397 (514)
T 1jcn_A 386 MGSLLAATTEAP 397 (514)
T ss_dssp ESTTTTTSTTSS
T ss_pred ECHHHHcCCcCC
Confidence 999999999864
No 73
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.13 E-value=3.1e-10 Score=107.77 Aligned_cols=187 Identities=15% Similarity=0.085 Sum_probs=116.2
Q ss_pred HHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCC
Q 013784 82 NHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCP 161 (436)
Q Consensus 82 ~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP 161 (436)
..+.....+.|--.+.+++....... ...+.+.+..+...+.|+++.=+-+++++..+ +.+.|+|+|-
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~~--~~~~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~----~~~~Gad~V~------ 100 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAIEN--SGENLPVLEKLSEFAEHIQIGGGIRSLDYAEK----LRKLGYRRQI------ 100 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHHHC--CCTTHHHHHHGGGGGGGEEEESSCCSHHHHHH----HHHTTCCEEE------
T ss_pred HHHHHHHHHcCCCEEEEecccccccC--CchhHHHHHHHHhcCCcEEEECCCCCHHHHHH----HHHCCCCEEE------
Confidence 44555556665334666665432211 11122222222223456665545556664433 3346888772
Q ss_pred CCccccCCCccccccCChHHHHHHHHHHhhcc--CCcE---EEEeccCCCCCC--cHHHHHHHHHHHhhcCCccEEEEcc
Q 013784 162 SPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPV---SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHS 234 (436)
Q Consensus 162 ~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPv---svKiR~G~~~~~--~~~~~~~~la~~~e~~Gvd~I~vhg 234 (436)
.|..++.+|+.+.++ +...+.. ++.+ .|++ .||.+.. +..++ ++.+++.|++.|.+|+
T Consensus 101 ---------lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~~~~e~----~~~~~~~G~~~i~~t~ 165 (241)
T 1qo2_A 101 ---------VSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEIDPVSL----LKRLKEYGLEEIVHTE 165 (241)
T ss_dssp ---------ECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCCCHHHH----HHHHHTTTCCEEEEEE
T ss_pred ---------ECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCCCHHHH----HHHHHhCCCCEEEEEe
Confidence 366677788888887 6553221 2222 3444 4776532 33343 3345679999999998
Q ss_pred CcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-----C-CCeeeehHHHHhCCcc
Q 013784 235 RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-----G-AHHVMVGRAAYQNPWY 305 (436)
Q Consensus 235 rt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-----G-ad~VmiGRa~l~~P~l 305 (436)
++..... .+ .+++.+.++++.. ++|||++|||.+++|+.++++. | ||+|++||+++..+.-
T Consensus 166 ~~~~g~~-~g--------~~~~~i~~l~~~~-~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~ 232 (241)
T 1qo2_A 166 IEKDGTL-QE--------HDFSLTKKIAIEA-EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILT 232 (241)
T ss_dssp TTHHHHT-CC--------CCHHHHHHHHHHH-TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSC
T ss_pred ecccccC-Cc--------CCHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCC
Confidence 7642111 11 1388888888765 8999999999999999999986 9 9999999999999875
No 74
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.09 E-value=8.6e-10 Score=105.06 Aligned_cols=151 Identities=11% Similarity=0.088 Sum_probs=104.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhh-c--cCCcE--
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-N--TNVPV-- 197 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~--~~iPv-- 197 (436)
.+.|+++.=+-+++++..++ .+.|+|+|-+ |..++.+|+.+.++.+.... . +++.+
T Consensus 74 ~~iPvi~~Ggi~~~~~~~~~----~~~Gad~V~l---------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~ 134 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDARKL----LLSGADKVSV---------------NSAAVRRPELIRELADHFGAQAVVLAIDARW 134 (252)
T ss_dssp CCSCEEEESSCCSHHHHHHH----HHHTCSEEEE---------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred CCCCEEEECCcCCHHHHHHH----HHcCCCEEEE---------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEec
Confidence 46788887666777654333 3458888733 56666788888888887642 1 23222
Q ss_pred -----EEEeccCCCCCC--cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEE
Q 013784 198 -----SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 270 (436)
Q Consensus 198 -----svKiR~G~~~~~--~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPV 270 (436)
.|++ .||.+.. +..+. ++.+++.|++.|.+|+++.. |.. .+ .+++.+.++.+.. ++||
T Consensus 135 ~~g~~~v~~-~g~~~~~~~~~~e~----~~~~~~~G~~~i~~~~~~~~--g~~------~g-~~~~~i~~l~~~~-~ipv 199 (252)
T 1ka9_F 135 RGDFPEVHV-AGGRVPTGLHAVEW----AVKGVELGAGEILLTSMDRD--GTK------EG-YDLRLTRMVAEAV-GVPV 199 (252)
T ss_dssp ETTEEEEEE-TTTTEEEEEEHHHH----HHHHHHHTCCEEEEEETTTT--TTC------SC-CCHHHHHHHHHHC-SSCE
T ss_pred CCCCEEEEE-CCCccccCCcHHHH----HHHHHHcCCCEEEEecccCC--CCc------CC-CCHHHHHHHHHHc-CCCE
Confidence 3444 3665421 22332 23345689999999976532 211 01 2488888888775 8999
Q ss_pred EEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 271 TLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 271 IanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
|++|||.+++|+.+++++|||+|++||+++.+||.+.
T Consensus 200 ia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~ 236 (252)
T 1ka9_F 200 IASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIP 236 (252)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHH
T ss_pred EEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999998753
No 75
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.09 E-value=1.3e-09 Score=101.98 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=72.8
Q ss_pred HHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEc--cCcccccCCCCCCCCCCCCccHHH
Q 013784 181 FVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH--SRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 181 ~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh--grt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
.+.++++.+++.+ +.++.+.+ .+.++.. .+++.|+|+|.+. |.+....+ ......+++.
T Consensus 105 ~~~~~i~~~~~~~~~~~v~~~~-------~t~~e~~-----~~~~~G~d~i~~~~~g~t~~~~~------~~~~~~~~~~ 166 (223)
T 1y0e_A 105 TLDELVSYIRTHAPNVEIMADI-------ATVEEAK-----NAARLGFDYIGTTLHGYTSYTQG------QLLYQNDFQF 166 (223)
T ss_dssp CHHHHHHHHHHHCTTSEEEEEC-------SSHHHHH-----HHHHTTCSEEECTTTTSSTTSTT------CCTTHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEecC-------CCHHHHH-----HHHHcCCCEEEeCCCcCcCCCCC------CCCCcccHHH
Confidence 3456677776655 56665432 2333322 2457999999763 33321000 0012234778
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhhh
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGH 309 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~ 309 (436)
+.++++.. ++|||++|||.+++++.++++.|||+|++||+++. |+...+.
T Consensus 167 ~~~~~~~~-~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~-p~~~~~~ 216 (223)
T 1y0e_A 167 LKDVLQSV-DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR-PKEITKR 216 (223)
T ss_dssp HHHHHHHC-CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC-HHHHHHH
T ss_pred HHHHHhhC-CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC-cHHHHHH
Confidence 88888775 89999999999999999999999999999999665 7765443
No 76
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.06 E-value=3.8e-09 Score=99.82 Aligned_cols=187 Identities=12% Similarity=0.084 Sum_probs=119.0
Q ss_pred HHHHHHHHcCCCc-EEEeccccchh-hhhcccchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCC
Q 013784 83 HYRTLARLISKHA-WLYTEMLAAET-IIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGC 160 (436)
Q Consensus 83 ~fr~~~~~~Gg~g-l~~temv~~~~-l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gc 160 (436)
.+...+.+.| ++ +.++++..... .......+.++.+. .+.|+++.-+-.+++++ +.+.++|+|+|.++.
T Consensus 37 ~~a~~~~~~G-~d~i~v~~~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~g~i~~~~~~----~~~~~~Gad~V~i~~-- 107 (253)
T 1h5y_A 37 EMAVRYEEEG-ADEIAILDITAAPEGRATFIDSVKRVAEA--VSIPVLVGGGVRSLEDA----TTLFRAGADKVSVNT-- 107 (253)
T ss_dssp HHHHHHHHTT-CSCEEEEECCCCTTTHHHHHHHHHHHHHH--CSSCEEEESSCCSHHHH----HHHHHHTCSEEEESH--
T ss_pred HHHHHHHHcC-CCEEEEEeCCccccCCcccHHHHHHHHHh--cCCCEEEECCCCCHHHH----HHHHHcCCCEEEECh--
Confidence 4445555665 55 66776544211 00011112222211 35789888888888764 334446999998872
Q ss_pred CCCccccCCCccccccCChHHHHHHHHHHhh-c--c--CC-----cEEEEeccCCCCCC-cHHHHHHHHHHHhhcCCccE
Q 013784 161 PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-N--T--NV-----PVSVKCRIGVDDHD-SYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 161 P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~--~--~i-----PvsvKiR~G~~~~~-~~~~~~~~la~~~e~~Gvd~ 229 (436)
.++.+|+.+.++.+.... . . +. ++.++++.++.... +..+.+ +.+++.|+|.
T Consensus 108 -------------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~----~~~~~~G~d~ 170 (253)
T 1h5y_A 108 -------------AAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWA----KEVEELGAGE 170 (253)
T ss_dssp -------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHH----HHHHHHTCSE
T ss_pred -------------HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHH----HHHHhCCCCE
Confidence 234567777777776432 1 1 22 15777777653321 232322 3345689999
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
|.+|+++.. |... + ..++.+.++.+.. ++||+++|||.+.+++.+++++|||+|++||+++.+++-
T Consensus 171 i~~~~~~~~--g~~~------~-~~~~~i~~l~~~~-~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 171 ILLTSIDRD--GTGL------G-YDVELIRRVADSV-RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp EEEEETTTT--TTCS------C-CCHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSC
T ss_pred EEEecccCC--CCcC------c-CCHHHHHHHHHhc-CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCCC
Confidence 999987652 2110 1 1378888887765 899999999999999999999999999999999988864
No 77
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.06 E-value=2.1e-08 Score=95.31 Aligned_cols=208 Identities=12% Similarity=0.085 Sum_probs=130.0
Q ss_pred CccccCCeecCCcEEEcCCCCCChH-HHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCC-CCCcEEEEEc-CC
Q 013784 58 KAEMVARQYLPPWFSVAPMMDWTDN-HYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSP-EQHPIVLQIG-GS 134 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagvtd~-~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~-~~~pi~vQL~-g~ 134 (436)
++++|++.++..|+++.- ..+.+. .++...+.. |+.++..-+=.. .+.+ ......+++.-+ .+-.+..|-. +.
T Consensus 9 d~l~i~~~~f~SRl~~Gt-gky~~~~~~~~a~~as-g~e~vtva~rR~-~~~~-~~~~~~~~~~i~~~~~~~lpNTag~~ 84 (265)
T 1wv2_A 9 TPFVIAGRTYGSRLLVGT-GKYKDLDETRRAIEAS-GAEIVTVAVRRT-NIGQ-NPDEPNLLDVIPPDRYTILPNTAGCY 84 (265)
T ss_dssp CCEEETTEEESCCEEECC-SCSSSHHHHHHHHHHS-CCSEEEEEGGGC-CC--------------CTTTSEEEEECTTCC
T ss_pred CCeEECCEEeecceEEec-CCCCCHHHHHHHHHHh-CCCeEEEEEEee-cccc-CCCcchHHhhhhhcCCEECCcCCCCC
Confidence 457799999999998753 345555 555555655 465543333222 2210 111234444323 3556777776 46
Q ss_pred CHHHHHHHHHHHHH-C-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANA-Y-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~-~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~ 212 (436)
+.++-.+.|+++.+ + |-++|.|-.-.- --.++.|+....+..+.+++. |+.+..-+- + +.
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d----------~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~~---d---d~- 146 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLAD----------QKTLFPNVVETLKAAEQLVKD-GFDVMVYTS---D---DP- 146 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSC----------TTTCCBCHHHHHHHHHHHHTT-TCEEEEEEC---S---CH-
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecC----------ccccCcCHHHHHHHHHHHHHC-CCEEEEEeC---C---CH-
Confidence 78999999999988 4 567887764211 113456666666666665443 443322111 1 22
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCe
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHH 292 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~ 292 (436)
. +++.+++.|+++|..+|..- |.+ .+..+++++..+++. +++|||+.|||.+++|+.++++.|||+
T Consensus 147 ~----~akrl~~~G~~aVmPlg~pI---GsG------~Gi~~~~lI~~I~e~-~~vPVI~eGGI~TPsDAa~AmeLGAdg 212 (265)
T 1wv2_A 147 I----IARQLAEIGCIAVMPLAGLI---GSG------LGICNPYNLRIILEE-AKVPVLVDAGVGTASDAAIAMELGCEA 212 (265)
T ss_dssp H----HHHHHHHSCCSEEEECSSST---TCC------CCCSCHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHHTCSE
T ss_pred H----HHHHHHHhCCCEEEeCCccC---CCC------CCcCCHHHHHHHHhc-CCCCEEEeCCCCCHHHHHHHHHcCCCE
Confidence 1 25566789999998887642 321 112248888888875 599999999999999999999999999
Q ss_pred eeehHHHHh
Q 013784 293 VMVGRAAYQ 301 (436)
Q Consensus 293 VmiGRa~l~ 301 (436)
|++|+++..
T Consensus 213 VlVgSAI~~ 221 (265)
T 1wv2_A 213 VLMNTAIAH 221 (265)
T ss_dssp EEESHHHHT
T ss_pred EEEChHHhC
Confidence 999999964
No 78
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.04 E-value=5.1e-10 Score=110.27 Aligned_cols=164 Identities=20% Similarity=0.229 Sum_probs=98.2
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccC
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
.+++++. ++. +.|+.+.+.|+|.|.+. ||.+...+... |+.++.+++.+.++. +.+++|+.+|+|.|
T Consensus 22 ~g~i~~~---~~~---~~a~~~~~~Ga~~I~~l--~p~~~~~~~~~-G~~~~~~~~~i~~I~----~~~~iPv~~k~r~g 88 (305)
T 2nv1_A 22 GGVIMDV---INA---EQAKIAEEAGAVAVMAL--ERVPADIRAAG-GVARMADPTIVEEVM----NAVSIPVMAKARIG 88 (305)
T ss_dssp TCEEEEE---SSH---HHHHHHHHTTCSEEEEC--CC-------CC-CCCCCCCHHHHHHHH----HHCSSCEEEEECTT
T ss_pred CCeeecC---CHH---HHHHHHHHcCCCEEEEc--CCCcchhhhcc-CcccCCCHHHHHHHH----HhCCCCEEeccccc
Confidence 4466644 443 46677788999999443 25554444433 667888888777764 44689999999985
Q ss_pred CCC--------------------CCc----H-------------HHHHHHHHHHhhcCCccEEEEccCccc---------
Q 013784 205 VDD--------------------HDS----Y-------------NQLCDFIYKVSSLSPTRHFIIHSRKAL--------- 238 (436)
Q Consensus 205 ~~~--------------------~~~----~-------------~~~~~~la~~~e~~Gvd~I~vhgrt~~--------- 238 (436)
+.+ ... . .+..+. .+.. +.|+|+|.++|....
T Consensus 89 ~~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~-~~a~-~~Gad~V~~~G~~g~g~~~~~~~h 166 (305)
T 2nv1_A 89 HIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEA-TRRI-AEGASMLRTKGEPGTGNIVEAVRH 166 (305)
T ss_dssp CHHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHH-HHHH-HTTCSEEEECCCTTSCCTHHHHHH
T ss_pred chHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHH-HHHH-HCCCCEEEeccccCccchHHHHhh
Confidence 410 000 0 001111 1222 467888877541100
Q ss_pred ----------ccCCCCCCCCC---CCCccHHHHHHHHhcCCCcEEE--EeCCCCCHHHHHHHHHcCCCeeeehHHHHhCC
Q 013784 239 ----------LNGISPAENRT---IPPLKYEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 239 ----------~~G~~~~~~~~---i~~~~~~~v~~l~~~~~~iPVI--anGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 303 (436)
..|.+..+... -.+..++++.++.+.. ++||+ ++|||.+++++.++++.|||+|++||+++..+
T Consensus 167 ~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~-~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~ 245 (305)
T 2nv1_A 167 MRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDG-KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSD 245 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHT-SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSS
T ss_pred hhhhhccchhhccccchhhhcccccccccHHHHHHHHHhc-CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCC
Confidence 00111000000 0123477788877764 89999 99999999999999999999999999999754
Q ss_pred c
Q 013784 304 W 304 (436)
Q Consensus 304 ~ 304 (436)
+
T Consensus 246 ~ 246 (305)
T 2nv1_A 246 N 246 (305)
T ss_dssp C
T ss_pred C
Confidence 3
No 79
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.04 E-value=3e-10 Score=139.00 Aligned_cols=196 Identities=15% Similarity=0.088 Sum_probs=133.0
Q ss_pred CCcEEEcCCCC-CChHHHHHHHHHcCCCcEE-EeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCHHHH------
Q 013784 68 PPWFSVAPMMD-WTDNHYRTLARLISKHAWL-YTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDNL------ 139 (436)
Q Consensus 68 ~n~iilAPMag-vtd~~fr~~~~~~Gg~gl~-~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p~~~------ 139 (436)
+.|||+|||++ .+++.+..++.++||.|.+ ...+.+++.+....++++++ .+.+.|+.||+.-.+|..+
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~---~~~~~p~~vNl~~~~p~~~~~~~g~ 503 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETL---LEPGRAIQFNTLFLDPYLWKLQVGG 503 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHH---SCTTCCCEEEEECSCHHHHHHHHHH
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHh---cCCCCceeechhhcChhhhhhccCH
Confidence 78999999995 5699999999999999988 44556777776555444444 2347899999998888542
Q ss_pred HHHHHHHHHCC--CCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcE-EEEeccCCCCCCcHHHHHH
Q 013784 140 AKATELANAYN--YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPV-SVKCRIGVDDHDSYNQLCD 216 (436)
Q Consensus 140 ~~aA~~~~~~G--~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPv-svKiR~G~~~~~~~~~~~~ 216 (436)
.+..+.+.+.| +|+|-+.+|.|.. +...++++.++++ |+.+ .++. .+..+...
T Consensus 504 ~~~~~~~~~~g~~vdgv~~~aG~P~~----------------ee~~~~i~~l~~~-Gi~~i~~~~-------~t~~~a~~ 559 (3089)
T 3zen_D 504 KRLVQRARQSGAPIDGLVVSAGIPDL----------------EEAVDIIDELNEV-GISHVVFKP-------GTVEQIRS 559 (3089)
T ss_dssp HHHHHHHHHTTCSCCEEEEESSCCCH----------------HHHHHHHTSTTHH-HHCSEEECC-------CSHHHHHH
T ss_pred HHHHHHHHHcCCCceEEEEeCCCCch----------------hHhHHHHHHHHHc-CCEEEEEeC-------CCHHHHHH
Confidence 25666778889 8889888888741 2234444444432 3332 2121 22322212
Q ss_pred HHHHHhhcCCcc------EEEEccCcccccCCCCCCCCCCCCccHHHH----HHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 217 FIYKVSSLSPTR------HFIIHSRKALLNGISPAENRTIPPLKYEYY----YALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 217 ~la~~~e~~Gvd------~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v----~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
+++.|+| +|+++|-++ +|..+.. .. ..++ .++ ++..++|||+.|||.|++++.+++
T Consensus 560 -----~~~i~~d~~~~~y~vv~~G~ea--GGH~g~~----~~--~~ll~~~~~~i-r~~~~iPViaaGGI~d~~~vaaal 625 (3089)
T 3zen_D 560 -----VIRIAAEVPTKPVIVHIEGGRA--GGHHSWE----DL--DDLLLATYSEL-RSRSNITICVGGGIGTPERSAEYL 625 (3089)
T ss_dssp -----HHHHHTTSTTSCEEEEECCSSS--SEECCSC----CH--HHHHHHHHHHH-TTCTTEEEEEESSCCCTTTTHHHH
T ss_pred -----HHHhhhhcCCCcEEEEEeCCCc--CCCCCcc----cH--HHHHHHHHHHH-hhcCCCeEEEEeCCCCHHHHHHHh
Confidence 1234444 889998876 2322211 11 3344 333 444589999999999999999999
Q ss_pred -----------HcCCCeeeehHHHHhCCc
Q 013784 287 -----------RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -----------~~Gad~VmiGRa~l~~P~ 304 (436)
..|||||++|+.++..+.
T Consensus 626 ~g~ws~~~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 626 SGRWAEVHGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp HTGGGGTTTCCCCCCSEEECSSTTTTCTT
T ss_pred ccccccccCccCCCCCEEEecHHHHhCcc
Confidence 889999999999998864
No 80
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.03 E-value=1.3e-09 Score=104.77 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=93.1
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc-C--ChHHHHHHHHHHh---hc--cC
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM-L--DPKFVGEAMSVIA---AN--TN 194 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll-~--~~~~l~eiv~av~---~~--~~ 194 (436)
.+.|+++.=+-++++++.++. +.|+|++-+. ..++ . +++.+.++++... +. ++
T Consensus 73 ~~iPvi~~ggi~~~~~i~~~~----~~Gad~v~lg---------------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~ 133 (266)
T 2w6r_A 73 TTLPIIASGGAGKMEHFLEAF----LAGADKALAA---------------SVFHFREIDMRELKEYLKKHGGSGQAVVVA 133 (266)
T ss_dssp CCSCEEEESCCCSTHHHHHHH----HHTCSEEECC---------------CCC------CHHHHHHCC----CCCEEEEE
T ss_pred cCCCEEEECCCCCHHHHHHHH----HcCCcHhhhh---------------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEE
Confidence 467888875556777654433 4688987554 2233 2 6777777766543 12 23
Q ss_pred CcE-------EEEeccCCCCCC--cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC
Q 013784 195 VPV-------SVKCRIGVDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF 265 (436)
Q Consensus 195 iPv-------svKiR~G~~~~~--~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~ 265 (436)
+++ .|+++ ||.... +..++ ++.+++.|++.|.+|+++.. |.. ...+++.+.++.+..
T Consensus 134 ~d~~~~~g~~~v~~~-g~~~~~~~~~~e~----~~~~~~~G~~~i~~t~~~~~--g~~-------~g~~~~~i~~l~~~~ 199 (266)
T 2w6r_A 134 IDAKRVDGEFMVFTH-SGKKNTGILLRDW----VVEVEKRGAGEILLTSIDRD--GTK-------SGYDTEMIRFVRPLT 199 (266)
T ss_dssp EEEEEETTEEEEEET-TTTEEEEEEHHHH----HHHHHHTTCSEEEEEETTTT--TTC-------SCCCHHHHHHHGGGC
T ss_pred EEEEecCCCEEEEEC-CCceecchhHHHH----HHHHHHcCCCEEEEEeecCC--CCc-------CCCCHHHHHHHHHHc
Confidence 332 34453 565321 23333 23445799999999876542 210 112488888887764
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 266 PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 266 ~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
++|||++|||.+++|+.+++++|||+|++|++++.+||.+
T Consensus 200 -~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~~~~ 239 (266)
T 2w6r_A 200 -TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDM 239 (266)
T ss_dssp -CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC------
T ss_pred -CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCCCCH
Confidence 8999999999999999999999999999999999999875
No 81
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.03 E-value=1.3e-09 Score=124.51 Aligned_cols=111 Identities=13% Similarity=0.103 Sum_probs=78.0
Q ss_pred ChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCC-----CCCCCC
Q 013784 178 DPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA-----ENRTIP 251 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~-----~~~~i~ 251 (436)
+++-+.++++.+++.. ++||.||.-.+.. ..+. ++.++++|+|+|+|+|... |.... ++..++
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g----i~~~----A~~a~~AGAD~IvVsG~eG---GTgasp~~~~~~~G~P 1044 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRSG----IGTI----AAGVAKANADIILISGNSG---GTGASPQTSIKFAGLP 1044 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCTT----HHHH----HHHHHHTTCSEEEEECTTC---CCSSEETTHHHHSCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCCC----hHHH----HHHHHHcCCcEEEEcCCCC---CCCCCchhhhcCCchh
Confidence 4567889999999877 8999999876421 1121 3455679999999987653 21110 011122
Q ss_pred CccHHHHHHHHhc---C---CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 252 PLKYEYYYALLRD---F---PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 252 ~~~~~~v~~l~~~---~---~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
. ...+.++.+. . .++|||+.|||.++.|+.+++.+|||+|++||++|.
T Consensus 1045 t--~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1045 W--EMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEEFGIGTASLI 1098 (1479)
T ss_dssp H--HHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSEEECCHHHHH
T ss_pred H--HHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeeEcHHHHH
Confidence 2 2344444332 1 279999999999999999999999999999999976
No 82
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.02 E-value=9.4e-09 Score=117.87 Aligned_cols=216 Identities=14% Similarity=0.082 Sum_probs=128.9
Q ss_pred ecCCcEEEcCCCCC--C---hHHHHHHHHHcCCCcEEEeccccchhhhhc-----ccchhhh---hccCC--CCCcEEEE
Q 013784 66 YLPPWFSVAPMMDW--T---DNHYRTLARLISKHAWLYTEMLAAETIIYQ-----QGNLDRF---LAFSP--EQHPIVLQ 130 (436)
Q Consensus 66 ~l~n~iilAPMagv--t---d~~fr~~~~~~Gg~gl~~temv~~~~l~~~-----~~~~~~~---~~~~~--~~~pi~vQ 130 (436)
.+..||+++||.+- | +..+...+.++|+.+.+.....+++.+... +.+...+ ..... ...-.+.|
T Consensus 865 ~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeGg~~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Q 944 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQ 944 (1520)
T ss_dssp HHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTTCCCGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEE
T ss_pred cccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCCCCCHHHHHhhhccccccccccccccccccCcchHHHHHHH
Confidence 57889999999953 3 246777788999887777666666544210 0000110 00111 12346888
Q ss_pred E----cCCCHHHHHHHHHHHHHCCCCEEEecCCCCC----------Cccc------cCCCccccc--------cCChHHH
Q 013784 131 I----GGSNLDNLAKATELANAYNYDEINLNCGCPS----------PKVA------GHGCFGVSL--------MLDPKFV 182 (436)
Q Consensus 131 L----~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~----------~~v~------r~g~yG~~L--------l~~~~~l 182 (436)
+ ||-+.+.. .. .|.|+|.++=-. .++. |.-..|..+ ..+++-+
T Consensus 945 l~sg~FGVn~~~l-------~~--ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl 1015 (1520)
T 1ofd_A 945 IASGRFGVTPEYL-------MS--GKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDL 1015 (1520)
T ss_dssp ECTTCTTCCHHHH-------HH--CSEEEEECCCTTSTTSCCEECGGGCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHH
T ss_pred hcCCCCccChhhc-------cc--hHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHcCCCCCCCeeCCCCCcCcCCHHHH
Confidence 8 34455421 22 577887653111 1111 000012111 1345678
Q ss_pred HHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCC-----CCCCCCCccHH
Q 013784 183 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPA-----ENRTIPPLKYE 256 (436)
Q Consensus 183 ~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~-----~~~~i~~~~~~ 256 (436)
.+++..+++.. ++||.||.-.+.. ..+ .++.++++|+|+|+|+|... |.... ++..++. ..
T Consensus 1016 ~~~I~~Lk~~~~~~PV~VKlv~~~g----i~~----~A~~a~kAGAD~IvVsG~eG---GTgasp~~~~~~~GlPt--~~ 1082 (1520)
T 1ofd_A 1016 AQLIYDLHQINPEAQVSVKLVAEIG----IGT----IAAGVAKANADIIQISGHDG---GTGASPLSSIKHAGSPW--EL 1082 (1520)
T ss_dssp HHHHHHHHHHCTTSEEEEEEECSTT----HHH----HHHHHHHTTCSEEEEECTTC---CCSSEEHHHHHHBCCCH--HH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCC----hHH----HHHHHHHcCCCEEEEeCCCC---ccCCCcchhhcCCchhH--HH
Confidence 88999999877 8999999876421 112 13455679999999987653 21110 0111222 23
Q ss_pred HHHHHHhcC------CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCC
Q 013784 257 YYYALLRDF------PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 257 ~v~~l~~~~------~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 303 (436)
.+.++.+.. .++|||+.|||.++.|+.+++.+|||+|++||++|...
T Consensus 1083 aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1083 GVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHH
Confidence 344443211 26999999999999999999999999999999998643
No 83
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.01 E-value=1.4e-09 Score=102.76 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=73.0
Q ss_pred HHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEE--EEccCcccccCCCCCCCCCCCCccHHHH
Q 013784 182 VGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHF--IIHSRKALLNGISPAENRTIPPLKYEYY 258 (436)
Q Consensus 182 l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I--~vhgrt~~~~G~~~~~~~~i~~~~~~~v 258 (436)
+.++++.+++.+ +.++.+.+. +.++ ++.+.+.|+|+| +++|.+...++. ...+++.+
T Consensus 120 ~~~~i~~i~~~~~~~~v~~~~~-------t~~e-----a~~a~~~Gad~i~~~v~g~~~~~~~~--------~~~~~~~i 179 (234)
T 1yxy_A 120 IASFIRQVKEKYPNQLLMADIS-------TFDE-----GLVAHQAGIDFVGTTLSGYTPYSRQE--------AGPDVALI 179 (234)
T ss_dssp HHHHHHHHHHHCTTCEEEEECS-------SHHH-----HHHHHHTTCSEEECTTTTSSTTSCCS--------SSCCHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEeCC-------CHHH-----HHHHHHcCCCEEeeeccccCCCCcCC--------CCCCHHHH
Confidence 467777777765 566655432 2333 223456999999 788765311111 12347888
Q ss_pred HHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 259 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 259 ~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
.++.+. ++||++.|||.|++++.++++.|||+|++||+++. |+..
T Consensus 180 ~~~~~~--~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~-p~~~ 224 (234)
T 1yxy_A 180 EALCKA--GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR-PKEI 224 (234)
T ss_dssp HHHHHT--TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC-HHHH
T ss_pred HHHHhC--CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC-hHHH
Confidence 888775 89999999999999999999999999999999887 6543
No 84
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.97 E-value=2.6e-08 Score=94.32 Aligned_cols=77 Identities=17% Similarity=0.011 Sum_probs=58.3
Q ss_pred HhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 221 VSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 221 ~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
.+++.|+|+|.+ +|++...+ ....+++.+.++++. ++|||++|||.+++|+.++++.|||+|++|++
T Consensus 144 ~a~~~Gad~Ig~~~~g~t~~~~---------~~~~~~~~i~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsa 212 (232)
T 3igs_A 144 ACQRLGADIIGTTMSGYTTPDT---------PEEPDLPLVKALHDA--GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSA 212 (232)
T ss_dssp HHHHTTCSEEECTTTTSSSSSC---------CSSCCHHHHHHHHHT--TCCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHhCCCCEEEEcCccCCCCCC---------CCCCCHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEehH
Confidence 345689999864 55543111 122358888888775 89999999999999999999999999999987
Q ss_pred HHhCCcchhhh
Q 013784 299 AYQNPWYTLGH 309 (436)
Q Consensus 299 ~l~~P~lf~~~ 309 (436)
++ +||...++
T Consensus 213 l~-~p~~~~~~ 222 (232)
T 3igs_A 213 IT-RLEHICGW 222 (232)
T ss_dssp HH-CHHHHHHH
T ss_pred hc-CHHHHHHH
Confidence 76 68765433
No 85
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.94 E-value=8.8e-09 Score=107.74 Aligned_cols=130 Identities=16% Similarity=0.185 Sum_probs=85.1
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
+.++.+.++|+|.|.++.. . + +.+...+.++.+++.+ ++|+..+ ++ .+.+. +
T Consensus 236 ~~a~~l~~~G~d~ivi~~a------~--g--------~~~~~~~~i~~l~~~~p~~pvi~G---~v---~t~~~-----a 288 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTA------H--G--------HSAGVLRKIAEIRAHFPNRTLIAG---NI---ATAEG-----A 288 (491)
T ss_dssp HHHHHHHHHTCSEEEECCS------C--T--------TCHHHHHHHHHHHHHCSSSCEEEE---EE---CSHHH-----H
T ss_pred HHHHHHHHcCCCeEEEeee------c--C--------cchhHHHHHHHHHHHCCCCcEeCC---Cc---cCHHH-----H
Confidence 4456666779998887741 0 1 2334567788888877 7888633 11 12222 2
Q ss_pred HHhhcCCccEEEEccC------cccccCCCCCCCCCCCCccHHHHHHHHh---cCCCcEEEEeCCCCCHHHHHHHHHcCC
Q 013784 220 KVSSLSPTRHFIIHSR------KALLNGISPAENRTIPPLKYEYYYALLR---DFPDLTFTLNGGINTVDEVNAALRKGA 290 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgr------t~~~~G~~~~~~~~i~~~~~~~v~~l~~---~~~~iPVIanGgI~s~~da~~~l~~Ga 290 (436)
+.+.++|+|.|.+... +....|. ..+ ..+.+.++.. .. ++|||+.|||.+++|+.++++.||
T Consensus 289 ~~~~~~Gad~I~vg~g~g~~~~tr~~~~~------~~p--~~~~l~~~~~~~~~~-~ipvia~GGi~~~~di~kal~~GA 359 (491)
T 1zfj_A 289 RALYDAGVDVVKVGIGPGSICTTRVVAGV------GVP--QVTAIYDAAAVAREY-GKTIIADGGIKYSGDIVKALAAGG 359 (491)
T ss_dssp HHHHHTTCSEEEECSSCCTTBCHHHHTCC------CCC--HHHHHHHHHHHHHHT-TCEEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEECccCCcceEEeeecCC------CCC--cHHHHHHHHHHHhhc-CCCEEeeCCCCCHHHHHHHHHcCC
Confidence 2334699999988310 1111111 111 2555555544 33 899999999999999999999999
Q ss_pred CeeeehHHHHhCCcch
Q 013784 291 HHVMVGRAAYQNPWYT 306 (436)
Q Consensus 291 d~VmiGRa~l~~P~lf 306 (436)
|+|++||+++.++...
T Consensus 360 ~~v~vG~~~~~~~e~~ 375 (491)
T 1zfj_A 360 NAVMLGSMFAGTDEAP 375 (491)
T ss_dssp SEEEESTTTTTBSSCC
T ss_pred cceeeCHHhhCCCcCc
Confidence 9999999999876643
No 86
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.92 E-value=4.8e-08 Score=92.36 Aligned_cols=78 Identities=15% Similarity=0.012 Sum_probs=59.0
Q ss_pred HhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 221 VSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 221 ~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
.+++.|+|+|.+ +|+|... .....+++++.++++. ++|||++|||.+++|+.++++.|||+|++|++
T Consensus 144 ~a~~~Gad~Ig~~~~g~t~~~---------~~~~~~~~li~~l~~~--~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsa 212 (229)
T 3q58_A 144 SCHQKGIEFIGTTLSGYTGPI---------TPVEPDLAMVTQLSHA--GCRVIAEGRYNTPALAANAIEHGAWAVTVGSA 212 (229)
T ss_dssp HHHHTTCSEEECTTTTSSSSC---------CCSSCCHHHHHHHHTT--TCCEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHhCCCCEEEecCccCCCCC---------cCCCCCHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEchH
Confidence 345689999854 5655311 0122358888888765 89999999999999999999999999999977
Q ss_pred HHhCCcchhhhh
Q 013784 299 AYQNPWYTLGHV 310 (436)
Q Consensus 299 ~l~~P~lf~~~~ 310 (436)
++ +||.+.+++
T Consensus 213 i~-~p~~~~~~f 223 (229)
T 3q58_A 213 IT-RIEHICQWF 223 (229)
T ss_dssp HH-CHHHHHHHH
T ss_pred hc-ChHHHHHHH
Confidence 65 688765443
No 87
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.92 E-value=3e-08 Score=95.68 Aligned_cols=209 Identities=12% Similarity=0.069 Sum_probs=120.3
Q ss_pred CccccCCeecCCcEEEcCCCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCC-CCCcEEEEEcC-CC
Q 013784 58 KAEMVARQYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSP-EQHPIVLQIGG-SN 135 (436)
Q Consensus 58 ~p~~i~~l~l~n~iilAPMagvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~-~~~pi~vQL~g-~~ 135 (436)
.+++|++++++||++++.-...+-..+.....+. |++++-..+=..+.. +...+.+++.-+ ...+++.|..+ .+
T Consensus 2 ~~~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~-Gad~ielg~pr~~~~---g~~~~~~~~~l~~~~~~~~pn~~~~~~ 77 (264)
T 1xm3_A 2 SMLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVS-ESDILTFAVRRMNIF---EASQPNFLEQLDLSKYTLLPNTAGAST 77 (264)
T ss_dssp CCEEETTEEESCCEEEECSCSSCHHHHHHHHHHH-TCSEEEEETTSSTTC----------CTTCCGGGSEEEEECTTCSS
T ss_pred CCeEECCEEecCCCEEEecCCCCHHHHHHHHHHc-CCeEEEEcccccccC---CCCHHHHHHHHHhcCCeEcCCccccCC
Confidence 4667999999999999865554444555555555 578774443111110 122333333222 24566678876 77
Q ss_pred HHHHHHHHHHHHHCC-CCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 136 LDNLAKATELANAYN-YDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 136 p~~~~~aA~~~~~~G-~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++..+.++.+.++| .+.|.++.- |.. . .+..+ ..++++++++.+ ++.+..-+. .+.+
T Consensus 78 ~~~~~~f~~~a~~agg~~~i~l~i~-~d~------~---~~~~e---~~~~~~~a~~~~~~g~~vi~~~~------~~~~ 138 (264)
T 1xm3_A 78 AEEAVRIARLAKASGLCDMIKVEVI-GCS------R---SLLPD---PVETLKASEQLLEEGFIVLPYTS------DDVV 138 (264)
T ss_dssp HHHHHHHHHHHHHTTCCSSEEECCB-CCT------T---TCCBC---HHHHHHHHHHHHHTTCCEEEEEC------SCHH
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeec-CCC------c---ccccc---hHHHHHHHHHHHCCCeEEEEEcC------CCHH
Confidence 887777777787774 456776641 110 0 00112 345555555543 433322111 1222
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCe
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHH 292 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~ 292 (436)
+ ++.+++.|+|+|...+... |.. ..+. .++.+..+.+. .++||++-|||.+++++.++++.|||+
T Consensus 139 ~-----a~~~~~~gad~v~~~~~~~---Gt~----~~~~--~~~~l~~i~~~-~~iPviv~gGI~t~eda~~~~~~GAdg 203 (264)
T 1xm3_A 139 L-----ARKLEELGVHAIMPGASPI---GSG----QGIL--NPLNLSFIIEQ-AKVPVIVDAGIGSPKDAAYAMELGADG 203 (264)
T ss_dssp H-----HHHHHHHTCSCBEECSSST---TCC----CCCS--CHHHHHHHHHH-CSSCBEEESCCCSHHHHHHHHHTTCSE
T ss_pred H-----HHHHHHhCCCEEEECCccc---CCC----CCCC--CHHHHHHHHhc-CCCCEEEEeCCCCHHHHHHHHHcCCCE
Confidence 2 2233457999984323211 111 0111 25667676664 489999999999999999999999999
Q ss_pred eeehHHHHhCCc
Q 013784 293 VMVGRAAYQNPW 304 (436)
Q Consensus 293 VmiGRa~l~~P~ 304 (436)
|.+|++++..++
T Consensus 204 ViVGSAi~~a~d 215 (264)
T 1xm3_A 204 VLLNTAVSGADD 215 (264)
T ss_dssp EEESHHHHTSSS
T ss_pred EEEcHHHhCCCC
Confidence 999999886554
No 88
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.92 E-value=1.1e-08 Score=100.19 Aligned_cols=204 Identities=12% Similarity=0.071 Sum_probs=134.7
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccc--cchhhhhccc---chhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv--~~~~l~~~~~---~~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|....+++.+.| ...+++.-. +...+.+.+- ..+.++. ....+.|+++.+ +|.+++...+.
T Consensus 21 ~~~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~ 99 (295)
T 1xg4_A 21 IVGTINANHALLAQRAG-YQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVART 99 (295)
T ss_dssp EEECSSHHHHHHHHHTT-CSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHH
Confidence 45778888999988886 666665432 2111211110 0111111 112457999999 88899999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHh
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 222 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~ 222 (436)
++.+.++|+++|.|.-+|.. ++..+.. |..|....+.+..|..++....+.++.|.-|..-......+++.+. ++.+
T Consensus 100 v~~l~~aGa~gv~iEd~~~~-k~cgH~~-gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~r-a~ay 176 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGA-KRSGHRP-NKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIER-AQAY 176 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSS-CCCTTSS-SCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHH-HHHH
T ss_pred HHHHHHcCCeEEEECCCCCC-cccCCCC-CCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHH-HHHH
Confidence 99998999999999999843 4443333 4457666677666666665555667778777642111123455554 5677
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC--CH-HHHHHHHHcCCCeeeehHHH
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN--TV-DEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~--s~-~da~~~l~~Gad~VmiGRa~ 299 (436)
+++|+|.|.+++.+. ++.+.++.+.+ ++|+++|..+. ++ -...++-+.|++.|++|.++
T Consensus 177 ~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 177 VEAGAEMLFPEAITE-----------------LAMYRQFADAV-QVPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHTTCSEEEETTCCS-----------------HHHHHHHHHHH-CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHcCCCEEEEeCCCC-----------------HHHHHHHHHHc-CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 889999999997531 66677777776 79999987652 22 23445556999999999987
Q ss_pred Hh
Q 013784 300 YQ 301 (436)
Q Consensus 300 l~ 301 (436)
+.
T Consensus 239 ~~ 240 (295)
T 1xg4_A 239 FR 240 (295)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 89
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.89 E-value=8.6e-08 Score=99.76 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=83.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~ 213 (436)
.++.+.++..+ .++|+|.|-|.... | ..+.+.+.++.+++.+ +++|.+- ++ .+.+.
T Consensus 279 ~~d~~eR~~aL-v~AGvD~iviD~ah--------G--------hs~~v~~~i~~ik~~~p~~~viaG---NV---aT~e~ 335 (556)
T 4af0_A 279 RPGDKDRLKLL-AEAGLDVVVLDSSQ--------G--------NSVYQIEFIKWIKQTYPKIDVIAG---NV---VTREQ 335 (556)
T ss_dssp SHHHHHHHHHH-HHTTCCEEEECCSC--------C--------CSHHHHHHHHHHHHHCTTSEEEEE---EE---CSHHH
T ss_pred CccHHHHHHHH-HhcCCcEEEEeccc--------c--------ccHHHHHHHHHHHhhCCcceEEec---cc---cCHHH
Confidence 35666555554 56799988776421 1 2355788899998865 5666442 11 23332
Q ss_pred HHHHHHHHhhcCCccEEEEc---c---CcccccCCCCCCCCCCCCccHHHHHHH---HhcCCCcEEEEeCCCCCHHHHHH
Q 013784 214 LCDFIYKVSSLSPTRHFIIH---S---RKALLNGISPAENRTIPPLKYEYYYAL---LRDFPDLTFTLNGGINTVDEVNA 284 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vh---g---rt~~~~G~~~~~~~~i~~~~~~~v~~l---~~~~~~iPVIanGgI~s~~da~~ 284 (436)
.. .+.++|+|+|.|- | .|+...|.+- |. +..+.++ .+.+ .+|||+-|||...-|+.+
T Consensus 336 a~-----~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~------PQ--~tAi~~~a~~a~~~-~vpvIADGGI~~sGDi~K 401 (556)
T 4af0_A 336 AA-----QLIAAGADGLRIGMGSGSICITQEVMAVGR------PQ--GTAVYAVAEFASRF-GIPCIADGGIGNIGHIAK 401 (556)
T ss_dssp HH-----HHHHHTCSEEEECSSCSTTBCCTTTCCSCC------CH--HHHHHHHHHHHGGG-TCCEEEESCCCSHHHHHH
T ss_pred HH-----HHHHcCCCEEeecCCCCcccccccccCCCC------cH--HHHHHHHHHHHHHc-CCCEEecCCcCcchHHHH
Confidence 22 2335899999883 1 1222223221 11 3344333 4444 799999999999999999
Q ss_pred HHHcCCCeeeehHHHHhC
Q 013784 285 ALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 285 ~l~~Gad~VmiGRa~l~~ 302 (436)
++..|||.||+|.-|-+.
T Consensus 402 AlaaGAd~VMlGsllAGt 419 (556)
T 4af0_A 402 ALALGASAVMMGGLLAGT 419 (556)
T ss_dssp HHHTTCSEEEESTTTTTB
T ss_pred HhhcCCCEEEEchhhccc
Confidence 999999999999866543
No 90
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.88 E-value=5.9e-09 Score=99.31 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=73.5
Q ss_pred EEEEeccCCCCC-CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC
Q 013784 197 VSVKCRIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 275 (436)
Q Consensus 197 vsvKiR~G~~~~-~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg 275 (436)
..||+|.|++.. .+..++ ++.+++.|+++|+++..++...+. ..+++.+.++.+.+ ++|||++||
T Consensus 22 ~~v~~~~~~~~~~~~~~~~----a~~~~~~G~~~i~v~d~~~~~~~~---------~~~~~~i~~i~~~~-~ipvi~~Gg 87 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDW----VVEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPLT-TLPIIASGG 87 (247)
T ss_dssp EEEEETTTTEEEEEEHHHH----HHHHHHTTCSEEEEEETTTTTCSS---------CCCHHHHHHHGGGC-CSCEEEESC
T ss_pred EEEEEcCCeecCCCCHHHH----HHHHHHcCCCEEEEEecCcccCCC---------cccHHHHHHHHHhC-CCCEEEeCC
Confidence 578888544321 133333 455678999999998765421111 12378888887775 999999999
Q ss_pred CCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 276 INTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 276 I~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
|.|++++.++++.|||+|++||+++.||+++.
T Consensus 88 i~~~~~~~~~l~~Gad~V~ig~~~l~dp~~~~ 119 (247)
T 3tdn_A 88 AGKMEHFLEAFLRGADKVSINTAAVENPSLIT 119 (247)
T ss_dssp CCSHHHHHHHHHTTCSEECCSHHHHHCTHHHH
T ss_pred CCCHHHHHHHHHcCCCeeehhhHHhhChHHHH
Confidence 99999999999999999999999999999753
No 91
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.82 E-value=1.1e-07 Score=96.53 Aligned_cols=142 Identities=10% Similarity=0.088 Sum_probs=112.1
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIG 204 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G 204 (436)
|+...+.+.+++.++++|+.+.+.||+.|+++.|| +++...+++++||+++ ++++.+...-|
T Consensus 138 ~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 138 GYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR-----------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC-----------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 44445556789999999999999999999999875 4677889999999988 57888887777
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNA 284 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~ 284 (436)
|+ .++..++ ++.+++.|+++|. . . +++.+++...++.+.. ++||++++.+.+++++.+
T Consensus 201 ~~----~~~a~~~-~~~l~~~~i~~iE----q----P--------~~~~~~~~~~~l~~~~-~iPI~~de~i~~~~~~~~ 258 (384)
T 2pgw_A 201 WS----VHDAINM-CRKLEKYDIEFIE----Q----P--------TVSWSIPAMAHVREKV-GIPIVADQAAFTLYDVYE 258 (384)
T ss_dssp CC----HHHHHHH-HHHHGGGCCSEEE----C----C--------SCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHH
T ss_pred CC----HHHHHHH-HHHHHhcCCCEEe----C----C--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHHHH
Confidence 74 3344443 5577889999876 1 1 1223477777887775 899999999999999999
Q ss_pred HHH-cCCCeeeehHHHHhCCcch
Q 013784 285 ALR-KGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 285 ~l~-~Gad~VmiGRa~l~~P~lf 306 (436)
+++ ..||.|++..+.++.++-+
T Consensus 259 ~i~~~~~d~v~ik~~~~GGit~~ 281 (384)
T 2pgw_A 259 ICRQRAADMICIGPREIGGIQPM 281 (384)
T ss_dssp HHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHcCCCCEEEEcchhhCCHHHH
Confidence 998 5699999999998888754
No 92
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.67 E-value=2.3e-07 Score=97.42 Aligned_cols=108 Identities=16% Similarity=0.085 Sum_probs=65.3
Q ss_pred HHHHHHHHhhcc-C-CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHH
Q 013784 182 VGEAMSVIAANT-N-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 259 (436)
Q Consensus 182 l~eiv~av~~~~-~-iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~ 259 (436)
+.+.++.+++.. + +|+.++.-. +.++. +.+.++|+|+|.+ |.......... .-..++......+.
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V~------t~~~a-----~~l~~aGad~I~V-g~~~g~~~~~r-~~~~~g~p~~~~l~ 336 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNIV------DGEGF-----RYLADAGADFIKI-GIGGGSICITR-EQKGIGRGQATAVI 336 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEEC------SHHHH-----HHHHHHTCSEEEE-CSSCSTTCCST-TTTCCCCCHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeecccc------CHHHH-----HHHHHhCCCeEEe-cccCCcCcccc-cccCCCCchHHHHH
Confidence 444556666554 4 666554322 22222 2334689999998 55331000000 00011112255555
Q ss_pred HHHhcCC--------CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 260 ALLRDFP--------DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 260 ~l~~~~~--------~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
++.+... ++|||+.|||.++.|+.++++.|||+||+||.++..
T Consensus 337 ~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~ 387 (503)
T 1me8_A 337 DVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARF 387 (503)
T ss_dssp HHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTB
T ss_pred HHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhcc
Confidence 5543321 599999999999999999999999999999999864
No 93
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.63 E-value=4.3e-08 Score=92.85 Aligned_cols=100 Identities=10% Similarity=0.116 Sum_probs=73.9
Q ss_pred EEEEeccCCCCCCc--HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 197 VSVKCRIGVDDHDS--YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 197 vsvKiR~G~~~~~~--~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
..||.+.||....+ ..+..+ +++.+++.|+|.|+++.++....+. ...++.+.++. .. ++||+++|
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~-~a~~~~~~Gad~i~v~d~~~~~~~~---------~~~~~~i~~i~-~~-~ipvi~~G 80 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVE-LVEKLIEEGFTLIHVVDLSNAIENS---------GENLPVLEKLS-EF-AEHIQIGG 80 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHH-HHHHHHHTTCCCEEEEEHHHHHHCC---------CTTHHHHHHGG-GG-GGGEEEES
T ss_pred EEEEEeccccccceecCcCHHH-HHHHHHHcCCCEEEEecccccccCC---------chhHHHHHHHH-hc-CCcEEEEC
Confidence 56888999865321 012233 2445667999999998765421111 12377777776 54 89999999
Q ss_pred CCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 275 GINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
||.+.+++.++++.|||+|++|++++.+|+++.+
T Consensus 81 gi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~ 114 (241)
T 1qo2_A 81 GIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKS 114 (241)
T ss_dssp SCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECchHhhChHHHHH
Confidence 9999999999999999999999999999997543
No 94
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.62 E-value=2.3e-06 Score=81.60 Aligned_cols=206 Identities=11% Similarity=0.028 Sum_probs=122.1
Q ss_pred ccccCCeecCCcEEEcCCCCCChH-HHHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcC-CCH
Q 013784 59 AEMVARQYLPPWFSVAPMMDWTDN-HYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGG-SNL 136 (436)
Q Consensus 59 p~~i~~l~l~n~iilAPMagvtd~-~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g-~~p 136 (436)
+++|++.++..|+++-= ..+.+. .++......| +.++..-+=.. .+.. .....++++-+ +-++..|-.| ++.
T Consensus 3 ~l~i~~~~~~srl~~Gt-gky~~~~~~~~ai~asg-~eivtva~rR~-~~~~--~~~~~~~~~i~-~~~~lpntaG~~ta 76 (268)
T 2htm_A 3 TWKVGPVELKSRLILGS-GKYEDFGVMREAIAAAK-AEVVTVSVRRV-ELKA--PGHVGLLEALE-GVRLLPNTAGARTA 76 (268)
T ss_dssp CEEETTEEECCSEEEEC-SSCSCHHHHHHHHHHTT-CSEEEEEEEEC-C---------CHHHHTT-TSEEEEBCTTCCSH
T ss_pred ceEECCEEeecceEEec-CCCCCHHHHHHHHHHhC-CCEEEEEcccc-CCCC--CCcccHHHHHh-hhhccCcccCCCCH
Confidence 46699999999998763 335454 5666666664 66554332111 1100 11123333333 5566677664 678
Q ss_pred HHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHH
Q 013784 137 DNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 215 (436)
Q Consensus 137 ~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~ 215 (436)
++..+++++..+. |-+.|.|-.- .... .++.|+....+..+.+++. |+.+...+ . ++. .+
T Consensus 77 eeAv~~a~lare~~gt~~iKlEvi-------~d~~---~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~---~---~D~-~~- 137 (268)
T 2htm_A 77 EEAVRLARLGRLLTGERWVKLEVI-------PDPT---YLLPDPLETLKAAERLIEE-DFLVLPYM---G---PDL-VL- 137 (268)
T ss_dssp HHHHHHHHHHHHHHCCSEEBCCCC-------SCTT---TTCCCHHHHHHHHHHHHHT-TCEECCEE---C---SCH-HH-
T ss_pred HHHHHHHHhhhHhcCcceeeeeec-------cCcc---ccCcCHHHHHHHHHHHHHC-CCEEeecc---C---CCH-HH-
Confidence 9999999988764 5567655421 1111 1556665555555555442 32221111 1 222 22
Q ss_pred HHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHHHcCCCeee
Q 013784 216 DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 216 ~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~-iPVIanGgI~s~~da~~~l~~Gad~Vm 294 (436)
++.+++.|+++|---|..- |.+ . +..+.+++..+++...+ +|||..|||.+++|+.++++.|||+|+
T Consensus 138 ---ak~l~~~G~~aVmPlg~pI---GsG----~--Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVl 205 (268)
T 2htm_A 138 ---AKRLAALGTATVMPLAAPI---GSG----W--GVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVL 205 (268)
T ss_dssp ---HHHHHHHTCSCBEEBSSST---TTC----C--CSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEE
T ss_pred ---HHHHHhcCCCEEEecCccC---cCC----c--ccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 4455678999985534321 211 0 11125667777773357 999999999999999999999999999
Q ss_pred ehHHHHh
Q 013784 295 VGRAAYQ 301 (436)
Q Consensus 295 iGRa~l~ 301 (436)
+|+|+..
T Consensus 206 VgSAI~~ 212 (268)
T 2htm_A 206 VNTAIAE 212 (268)
T ss_dssp ESHHHHT
T ss_pred EChHHhC
Confidence 9999874
No 95
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.59 E-value=7.5e-07 Score=93.09 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=39.3
Q ss_pred HHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 256 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 256 ~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
..+.++.+++ ++|||+.|||.+..|+.+++.+|||+||+||.++..
T Consensus 318 ~~~~~~~~~~-~vpVia~GGi~~~~di~kalalGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 318 AMVADRAQEY-GLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGT 363 (486)
T ss_dssp HHHHHHHHHH-TCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHHHc-CCcEEecCCCCCHHHHHHHHHcCCCceeeChhhhcC
Confidence 3344555554 799999999999999999999999999999999864
No 96
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.58 E-value=1.9e-07 Score=86.05 Aligned_cols=148 Identities=18% Similarity=0.258 Sum_probs=95.4
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKi 201 (436)
+.|+++.+.+.+++++.+.++.+.+.|++.|+++..||.. .+.++.+++.+ ++++.+
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~-------------------~~~i~~ir~~~~~~~~ig~-- 67 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA-------------------DTVIKELSFLKEKGAIIGA-- 67 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH-------------------HHHHHHTHHHHHTTCEEEE--
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------------------HHHHHHHHHHCCCCcEEEe--
Confidence 5689999999999999999999999999999999887531 23455555543 233322
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccc-------------ccC-CCCC----------CCCCCCC---cc
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-------------LNG-ISPA----------ENRTIPP---LK 254 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~-------------~~G-~~~~----------~~~~i~~---~~ 254 (436)
|. ..+.++.. .+.++|+|+| +++.... ..| .++. +.-.+.+ ..
T Consensus 68 --~~--v~~~~~~~-----~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g 137 (205)
T 1wa3_A 68 --GT--VTSVEQCR-----KAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVG 137 (205)
T ss_dssp --ES--CCSHHHHH-----HHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHH
T ss_pred --cc--cCCHHHHH-----HHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccC
Confidence 11 11233322 2234788888 5532210 000 0000 0000011 22
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 255 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 255 ~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
.+.+.++.+.++++||++.|||. .+++.++++.|||+|.+|++++. ++
T Consensus 138 ~~~~~~l~~~~~~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~-~d 185 (205)
T 1wa3_A 138 PQFVKAMKGPFPNVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK-GT 185 (205)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC-SC
T ss_pred HHHHHHHHHhCCCCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC-CC
Confidence 45667776665589999999996 78999999999999999999987 54
No 97
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.58 E-value=1.1e-06 Score=84.18 Aligned_cols=162 Identities=17% Similarity=0.215 Sum_probs=102.4
Q ss_pred CCcEEEEEcCCCH--HHHHHHHHHHHHCCCCEEEecCCCCCCccccCC-----------CccccccCChHHHHHHHHHHh
Q 013784 124 QHPIVLQIGGSNL--DNLAKATELANAYNYDEINLNCGCPSPKVAGHG-----------CFGVSLMLDPKFVGEAMSVIA 190 (436)
Q Consensus 124 ~~pi~vQL~g~~p--~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g-----------~yG~~Ll~~~~~l~eiv~av~ 190 (436)
...++.-|...+| +.+.+.++.+.+.|+|.|+++.-+..+... | ..| -+++...+++++++
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~d--g~~i~~a~~~al~~g----~~~~~~~~~i~~ir 90 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYID--GPIIQASVARALASG----TTMDAVLEMLREVT 90 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTS--CHHHHHHHHHHHTTT----CCHHHHHHHHHHHG
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccC--CHHHHHHHHHHHHcC----CCHHHHHHHHHHHH
Confidence 3456666666666 888888999999999999998766532110 0 012 36788889999999
Q ss_pred hccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccC--------------------------cc-----c-
Q 013784 191 ANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--------------------------KA-----L- 238 (436)
Q Consensus 191 ~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr--------------------------t~-----~- 238 (436)
+.+++|+.+..+.+.......+. +.++|+|.++++.- +. .
T Consensus 91 ~~~~~Pv~~m~~~~~~~~~~~~~--------a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~ 162 (262)
T 1rd5_A 91 PELSCPVVLLSYYKPIMFRSLAK--------MKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEI 162 (262)
T ss_dssp GGCSSCEEEECCSHHHHSCCTHH--------HHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHH
T ss_pred hcCCCCEEEEecCcHHHHHHHHH--------HHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHH
Confidence 98899987753221000000000 12345555444321 10 0
Q ss_pred ------------ccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 239 ------------LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 239 ------------~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
..|.++.. ....+...+++.++.+.. ++||++.|||.+++++.++++.|||+|.+|++++.
T Consensus 163 ~~~~~g~v~~~s~~G~tG~~-~~~~~~~~~~i~~v~~~~-~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~ 235 (262)
T 1rd5_A 163 TKASEGFVYLVSVNGVTGPR-ANVNPRVESLIQEVKKVT-NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVR 235 (262)
T ss_dssp HHHCCSCEEEECSSCCBCTT-SCBCTHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HhcCCCeEEEecCCCCCCCC-cCCCchHHHHHHHHHhhc-CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 01111111 112232355777777654 89999999999999999999999999999999864
No 98
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.55 E-value=3.6e-07 Score=89.28 Aligned_cols=156 Identities=17% Similarity=0.223 Sum_probs=96.6
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
..|+++.+.. .+.++.+.+.|++.|+++.++|... +..+ |..+.+.++.+ +.+++.+++|+.++.+.
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~--~~~~-G~~~~~~~~~i----~~i~~~~~~Pvi~~~~~ 87 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADI--RAQG-GVARMSDPKII----KEIMAAVSIPVMAKVRI 87 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHH--HHTT-CCCCCCCHHHH----HHHHTTCSSCEEEEEET
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHH--Hhhc-CCccCCCHHHH----HHHHHhcCCCeEEEecc
Confidence 4577776654 4566777888999999987665431 2222 55566776654 45566778999988776
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEE---------------------------------------------EEccCccc
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHF---------------------------------------------IIHSRKAL 238 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I---------------------------------------------~vhgrt~~ 238 (436)
++ .++ + +.+.++|+|.| .+||-...
T Consensus 88 ~~-----~~~-~----~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~ 157 (297)
T 2zbt_A 88 GH-----FVE-A----MILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGT 157 (297)
T ss_dssp TC-----HHH-H----HHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSS
T ss_pred CC-----HHH-H----HHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccC
Confidence 53 111 1 11223555555 44321000
Q ss_pred -------------------ccCCCCCCCC---CCCCccHHHHHHHHhcCCCcEEE--EeCCCCCHHHHHHHHHcCCCeee
Q 013784 239 -------------------LNGISPAENR---TIPPLKYEYYYALLRDFPDLTFT--LNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 239 -------------------~~G~~~~~~~---~i~~~~~~~v~~l~~~~~~iPVI--anGgI~s~~da~~~l~~Gad~Vm 294 (436)
..|..+.... ...+..++.+.++.+.. ++||+ +.|||.+++++.++++.|||+|+
T Consensus 158 g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~-~~pvi~~a~GGI~~~e~i~~~~~aGadgvv 236 (297)
T 2zbt_A 158 GNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG-RLPVVNFAAGGIATPADAALMMHLGMDGVF 236 (297)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS-SCSSCEEBCSSCCSHHHHHHHHHTTCSEEE
T ss_pred cchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc-CCCcEEEeeCCCCCHHHHHHHHHcCCCEEE
Confidence 0000000000 00122366777777654 78998 99999999999999999999999
Q ss_pred ehHHHHhCC
Q 013784 295 VGRAAYQNP 303 (436)
Q Consensus 295 iGRa~l~~P 303 (436)
+|++++..+
T Consensus 237 vGsai~~~~ 245 (297)
T 2zbt_A 237 VGSGIFKSG 245 (297)
T ss_dssp ECGGGGGSS
T ss_pred EchHHhCCC
Confidence 999998543
No 99
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.54 E-value=4.9e-07 Score=85.77 Aligned_cols=166 Identities=13% Similarity=0.152 Sum_probs=109.0
Q ss_pred CCcEEEEEcCCCH--HHHHHHHHHHHHCCCCEEEec--CCCCCCccccCCCcccccc----------CChHHHHHHHHHH
Q 013784 124 QHPIVLQIGGSNL--DNLAKATELANAYNYDEINLN--CGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVI 189 (436)
Q Consensus 124 ~~pi~vQL~g~~p--~~~~~aA~~~~~~G~d~IdLN--~gcP~~~v~r~g~yG~~Ll----------~~~~~l~eiv~av 189 (436)
...++..|.+.+| +.+.+.++.+++. +|.|+++ ++||.. | |.... .+.....++++++
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~-----D--G~~~~~~~~~al~~g~~~~~~~~~i~~i 75 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIA-----D--GKTIQESHYRALKNGFKLREAFWIVKEF 75 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTT-----S--CHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCC-----C--CHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 3468899999888 5888999988888 9999988 667653 1 21100 2667778999999
Q ss_pred hhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-----------ccc-----CCCC---------
Q 013784 190 AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-----------LLN-----GISP--------- 244 (436)
Q Consensus 190 ~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-----------~~~-----G~~~--------- 244 (436)
++.+++||-+............+ +++. .+.++|+|.|++|.-.. .++ +.++
T Consensus 76 ~~~~~~pv~~~~~~~~~~~~~~~---~~~~-~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~ 151 (248)
T 1geq_A 76 RRHSSTPIVLMTYYNPIYRAGVR---NFLA-EAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKV 151 (248)
T ss_dssp HTTCCCCEEEEECHHHHHHHCHH---HHHH-HHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHH
T ss_pred HhhCCCCEEEEeccchhhhcCHH---HHHH-HHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHH
Confidence 99888998776421100000011 2222 33458899998874110 000 0000
Q ss_pred ----CC------------CC--CCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 245 ----AE------------NR--TIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 245 ----~~------------~~--~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
.+ .. ...+..++.+.++.+.. ++||++.|||.+++++.++++.|||+|.+|++++..
T Consensus 152 ~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 152 IDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC-RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKI 226 (248)
T ss_dssp HHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred HHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc-CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhh
Confidence 00 00 01122356777777765 899999999999999999999999999999998765
No 100
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.53 E-value=1.3e-06 Score=87.56 Aligned_cols=140 Identities=9% Similarity=0.006 Sum_probs=104.6
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKi 201 (436)
.-|+...+...+++.++++|+.+.+.||+.|+++.||+ +++...+++++|++++ ++++.++.
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP----------------ALDQDLAVVRSIRQAVGDDFGIMVDY 196 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS----------------SHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 34554443336789999999999999999999998872 3567788999999877 58899988
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
..||+. ++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.++++
T Consensus 197 n~~~~~----~~a~~~-~~~l~~~~i~~iE-----~-----------P~~~~~~~~~~~l~~~~-~iPI~~de~~~~~~~ 254 (359)
T 1mdl_A 197 NQSLDV----PAAIKR-SQALQQEGVTWIE-----E-----------PTLQHDYEGHQRIQSKL-NVPVQMGENWLGPEE 254 (359)
T ss_dssp TTCSCH----HHHHHH-HHHHHHHTCSCEE-----C-----------CSCTTCHHHHHHHHHTC-SSCEEECTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHHHHhCCCeEE-----C-----------CCChhhHHHHHHHHHhC-CCCEEeCCCCCCHHH
Confidence 888753 344443 4456778998874 1 11223477777887765 899999999999999
Q ss_pred HHHHHH-cCCCeeeehHHHHh
Q 013784 282 VNAALR-KGAHHVMVGRAAYQ 301 (436)
Q Consensus 282 a~~~l~-~Gad~VmiGRa~l~ 301 (436)
+.++++ ..||.|++-.+-++
T Consensus 255 ~~~~i~~~~~d~v~ik~~~~G 275 (359)
T 1mdl_A 255 MFKALSIGACRLAMPDAMKIG 275 (359)
T ss_dssp HHHHHHTTCCSEECCBTTTTT
T ss_pred HHHHHHcCCCCEEeecchhhC
Confidence 999998 56999997554433
No 101
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.48 E-value=1.3e-06 Score=88.02 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++.+++.|+.+.+.||+.|.|+.||+ +++...+++++||+++ ++++.++...||+. +
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~----~ 205 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP----------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTV----D 205 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS----------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCH----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH----H
Confidence 799999999999999999999998874 3567788999999877 58899998888853 3
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCC
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad 291 (436)
+..++ .+.+++.|+++|. . . +++.+++...++.+.. ++||++.+.+.+.+++.++++ ..||
T Consensus 206 ~a~~~-~~~l~~~~i~~iE-----q---P--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~~~~~i~~~~~d 267 (371)
T 2ovl_A 206 GAIRA-ARALAPFDLHWIE-----E---P--------TIPDDLVGNARIVRES-GHTIAGGENLHTLYDFHNAVRAGSLT 267 (371)
T ss_dssp HHHHH-HHHHGGGCCSEEE-----C---C--------SCTTCHHHHHHHHHHH-CSCEEECTTCCSHHHHHHHHHHTCCS
T ss_pred HHHHH-HHHHHhcCCCEEE-----C---C--------CCcccHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 44444 4567889999874 1 1 1223477777777765 899999999999999999998 5699
Q ss_pred eeeehHHHHhCCc
Q 013784 292 HVMVGRAAYQNPW 304 (436)
Q Consensus 292 ~VmiGRa~l~~P~ 304 (436)
.|++..+-++.++
T Consensus 268 ~v~ik~~~~GGi~ 280 (371)
T 2ovl_A 268 LPEPDVSNIGGYT 280 (371)
T ss_dssp EECCCTTTTTSHH
T ss_pred EEeeCccccCCHH
Confidence 9998766555554
No 102
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.48 E-value=2.8e-06 Score=85.85 Aligned_cols=137 Identities=9% Similarity=0.027 Sum_probs=104.6
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEecc
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~ 203 (436)
|+...+...+++.++++|+.+.+.||+.|+|+.|+ +++...+++++||+++ ++++.++..-
T Consensus 136 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 136 PMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 44444444689999999999999999999999876 3677889999999987 4889998887
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
||+. ++..++ ++.+++.|+ +|. . . ++ +++...++.+.. ++||++++.+.+++++.
T Consensus 199 ~~~~----~~a~~~-~~~l~~~~i-~iE-----~---P--------~~--~~~~~~~l~~~~-~iPI~~de~i~~~~~~~ 253 (379)
T 2rdx_A 199 GWRV----DNAIRL-ARATRDLDY-ILE-----Q---P--------CR--SYEECQQVRRVA-DQPMKLDECVTGLHMAQ 253 (379)
T ss_dssp CSCH----HHHHHH-HHHTTTSCC-EEE-----C---C--------SS--SHHHHHHHHTTC-CSCEEECTTCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHHhCCe-EEe-----C---C--------cC--CHHHHHHHHhhC-CCCEEEeCCcCCHHHHH
Confidence 7753 344443 456788898 763 1 0 11 477777877765 89999999999999999
Q ss_pred HHHH-cCCCeeeehHHHHhCCc
Q 013784 284 AALR-KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 284 ~~l~-~Gad~VmiGRa~l~~P~ 304 (436)
++++ ..||.|++-.+-.+.++
T Consensus 254 ~~i~~~~~d~v~ik~~~~GGit 275 (379)
T 2rdx_A 254 RIVADRGAEICCLKISNLGGLS 275 (379)
T ss_dssp HHHHHTCCSEEEEETTTTTSHH
T ss_pred HHHHcCCCCEEEEeccccCCHH
Confidence 9998 56999998665555444
No 103
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.45 E-value=6.2e-06 Score=83.30 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=105.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~ 211 (436)
.+++.+++.|+.+.+.||+.+.|+.|++. || ...+++...+++++||+++ ++++.+...-||+ .
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~--------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~----~ 213 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP--------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYS----R 213 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT--------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCC----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc--------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCC----H
Confidence 68999999999888889999999999864 23 2358899999999999977 5888888887774 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC-HHHHHHHHH-cC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALR-KG 289 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s-~~da~~~l~-~G 289 (436)
++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+ .+++.++++ ..
T Consensus 214 ~~a~~~-~~~l~~~~i~~iE----~------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~~i~~~~ 275 (382)
T 1rvk_A 214 TDALAL-GRGLEKLGFDWIE----E------------PMDEQSLSSYKWLSDNL-DIPVVGPESAAGKHWHRAEWIKAGA 275 (382)
T ss_dssp HHHHHH-HHHHHTTTCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHHhcCCCEEe----C------------CCChhhHHHHHHHHhhC-CCCEEEeCCccCcHHHHHHHHHcCC
Confidence 344454 4567889999875 1 11223477777887765 899999999999 999999998 45
Q ss_pred CCeeeehHHHHhC
Q 013784 290 AHHVMVGRAAYQN 302 (436)
Q Consensus 290 ad~VmiGRa~l~~ 302 (436)
||.|++--.-.+-
T Consensus 276 ~d~v~ik~~~~GG 288 (382)
T 1rvk_A 276 CDILRTGVNDVGG 288 (382)
T ss_dssp CSEEEECHHHHTS
T ss_pred CCEEeeCchhcCC
Confidence 8999985554443
No 104
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.43 E-value=2.9e-06 Score=86.06 Aligned_cols=141 Identities=6% Similarity=-0.040 Sum_probs=106.4
Q ss_pred CcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 013784 125 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKi 201 (436)
-|+...+. ..+++.++++|+.+.+.||+.|+|+.|| .+++. .+++++|++++ ++++.++.
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~-~e~v~avr~a~g~d~~l~vDa 215 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV----------------ADDGP-AAEIANLRQVLGPQAKIAADM 215 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG----------------CTTCH-HHHHHHHHHHHCTTSEEEEEC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC----------------CChHH-HHHHHHHHHHhCCCCEEEEEC
Confidence 35555553 3689999999999999999999999775 23456 78888998876 58899988
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-||+. ++..++ .+.+++.|+++|. . . +++.+++...++.+.. ++||++.+.+.++++
T Consensus 216 n~~~~~----~~a~~~-~~~l~~~~i~~iE-----q---P--------~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~~~ 273 (388)
T 2nql_A 216 HWNQTP----ERALEL-IAEMQPFDPWFAE-----A---P--------VWTEDIAGLEKVSKNT-DVPIAVGEEWRTHWD 273 (388)
T ss_dssp CSCSCH----HHHHHH-HHHHGGGCCSCEE-----C---C--------SCTTCHHHHHHHHTSC-CSCEEECTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHHhhcCCCEEE-----C---C--------CChhhHHHHHHHHhhC-CCCEEEeCCcCCHHH
Confidence 877753 344454 4557889999874 1 1 1223477777877765 899999999999999
Q ss_pred HHHHHH-cCCCeeeehHHHHhCCcc
Q 013784 282 VNAALR-KGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 282 a~~~l~-~Gad~VmiGRa~l~~P~l 305 (436)
+.++++ ..||.|++-..- +.++-
T Consensus 274 ~~~~i~~~~~d~v~ik~~~-GGit~ 297 (388)
T 2nql_A 274 MRARIERCRIAIVQPEMGH-KGITN 297 (388)
T ss_dssp HHHHHTTSCCSEECCCHHH-HCHHH
T ss_pred HHHHHHcCCCCEEEecCCC-CCHHH
Confidence 999998 559999997777 66553
No 105
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.41 E-value=5e-06 Score=83.56 Aligned_cols=144 Identities=10% Similarity=0.173 Sum_probs=110.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+..++++.+++.+.+.|+.+.+.||+.+.|+.|+ +++...+++++|++++ ++++.+.
T Consensus 129 ~~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~~~~l~vD 191 (369)
T 2p8b_A 129 EEFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT-----------------NVKEDVKRIEAVRERVGNDIAIRVD 191 (369)
T ss_dssp SCEECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CceeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 33456678888899999999999989999999998763 3677888999999877 5888888
Q ss_pred eccCCCCCCcHHHHH-HHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 201 CRIGVDDHDSYNQLC-DFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~-~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
...||+. ++.. ++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.++
T Consensus 192 an~~~~~----~~a~~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPI~~dE~~~~~ 249 (369)
T 2p8b_A 192 VNQGWKN----SANTLTA-LRSLGHLNIDWIE----Q------------PVIADDIDAMAHIRSKT-DLPLMIDEGLKSS 249 (369)
T ss_dssp CTTTTBS----HHHHHHH-HHTSTTSCCSCEE----C------------CBCTTCHHHHHHHHHTC-CSCEEESTTCCSH
T ss_pred CCCCCCH----HHHHHHH-HHHHHhCCCcEEE----C------------CCCcccHHHHHHHHHhC-CCCEEeCCCCCCH
Confidence 8877753 2334 43 4567888998775 1 11223477777887765 8999999999999
Q ss_pred HHHHHHHH-cCCCeeeehHHHHhCCcc
Q 013784 280 DEVNAALR-KGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 280 ~da~~~l~-~Gad~VmiGRa~l~~P~l 305 (436)
+++.++++ ..||.|++-.+-++..+-
T Consensus 250 ~~~~~~i~~~~~d~v~ik~~~~GGit~ 276 (369)
T 2p8b_A 250 REMRQIIKLEAADKVNIKLMKCGGIYP 276 (369)
T ss_dssp HHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHhCCCCEEEeecchhCCHHH
Confidence 99999998 569999998777666543
No 106
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.40 E-value=4.2e-06 Score=85.36 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCC-ccccCCCcccccc-CChHHHHHHHHHHhhcc--CCcEEEEeccC
Q 013784 135 NLDNLAKATELANAYNYDEINLNC------GCPSP-KVAGHGCFGVSLM-LDPKFVGEAMSVIAANT--NVPVSVKCRIG 204 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~------gcP~~-~v~r~g~yG~~Ll-~~~~~l~eiv~av~~~~--~iPvsvKiR~G 204 (436)
+++++++.|+.+.+.||+.+.|+. |++.. ...+ ..||+... ++++...+++++||+++ ++++.+...-+
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~-~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~ 228 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN-RNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSL 228 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC-GGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc-ccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 899999999999999999999996 65211 1111 25787764 57788999999999977 47788877766
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHH
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNA 284 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~ 284 (436)
|+ .++..++ .+.+++.|+++|.- .+++.+++...++.+.. ++||++.+.+.+.+++++
T Consensus 229 ~~----~~~ai~~-~~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~ 286 (410)
T 2gl5_A 229 LG----TNSAIQF-AKAIEKYRIFLYEE----------------PIHPLNSDNMQKVSRST-TIPIATGERSYTRWGYRE 286 (410)
T ss_dssp SC----HHHHHHH-HHHHGGGCEEEEEC----------------SSCSSCHHHHHHHHHHC-SSCEEECTTCCTTHHHHH
T ss_pred CC----HHHHHHH-HHHHHhcCCCeEEC----------------CCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHH
Confidence 64 3444554 45578889887651 11223477777887775 899999999999999999
Q ss_pred HHHc-CCCeeee
Q 013784 285 ALRK-GAHHVMV 295 (436)
Q Consensus 285 ~l~~-Gad~Vmi 295 (436)
+++. .||.|++
T Consensus 287 ~i~~~~~d~v~i 298 (410)
T 2gl5_A 287 LLEKQSIAVAQP 298 (410)
T ss_dssp HHHTTCCSEECC
T ss_pred HHHcCCCCEEec
Confidence 9984 4898885
No 107
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.40 E-value=3.7e-07 Score=86.74 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=63.8
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.++++|+|.|+++..+....+ .+..++.+.++.+.. ++||+++|+|.+++++.++++.|||+|++|++
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~---------~~~~~~~i~~i~~~~-~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEK---------RKTMLELVEKVAEQI-DIPFTVGGGIHDFETASELILRGADKVSINTA 105 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSH---------HHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHcCCCEEEEECCchhhcC---------CcccHHHHHHHHHhC-CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 45667899999999876532111 112366677777664 89999999999999999999999999999999
Q ss_pred HHhCCcchhhh
Q 013784 299 AYQNPWYTLGH 309 (436)
Q Consensus 299 ~l~~P~lf~~~ 309 (436)
++.+|+++.+.
T Consensus 106 ~l~~p~~~~~~ 116 (253)
T 1thf_D 106 AVENPSLITQI 116 (253)
T ss_dssp HHHCTHHHHHH
T ss_pred HHhChHHHHHH
Confidence 99999976443
No 108
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.38 E-value=9.2e-06 Score=78.30 Aligned_cols=167 Identities=16% Similarity=0.165 Sum_probs=102.3
Q ss_pred CCcEEEEEcCCCH--HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc----------CChHHHHHHHHHHhh
Q 013784 124 QHPIVLQIGGSNL--DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAA 191 (436)
Q Consensus 124 ~~pi~vQL~g~~p--~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll----------~~~~~l~eiv~av~~ 191 (436)
...++.-|...+| +...+.++.+++.|+|.|+++.-...+. . | |-... -+.+...++++++++
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~-~--D--G~~i~~a~~~al~~G~~~~~~~~~v~~ir~ 90 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPL-A--D--GPTIQNANLRAFAAGVTPAQCFEMLAIIRE 90 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCT-T--C--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCcc-C--C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 3456777777777 8888889999999999999965221110 0 0 11111 245666789999998
Q ss_pred c-cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccc----------cc--------------------
Q 013784 192 N-TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL----------LN-------------------- 240 (436)
Q Consensus 192 ~-~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~----------~~-------------------- 240 (436)
. +++|+.+-.-.+.-.....+ +++. .+.++|+|.+++|.-... ..
T Consensus 91 ~~~~~Pv~lm~y~n~v~~~g~~---~~~~-~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i 166 (268)
T 1qop_A 91 KHPTIPIGLLMYANLVFNNGID---AFYA-RCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQV 166 (268)
T ss_dssp HCSSSCEEEEECHHHHHTTCHH---HHHH-HHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred cCCCCCEEEEEcccHHHHhhHH---HHHH-HHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 8 79997652111100000111 2222 233477777777643200 00
Q ss_pred --------------CCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 241 --------------GISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 241 --------------G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
|.++... ...+...+++.++.+.. ++||+..|||.+++++.+++..|||+|.+|++++.
T Consensus 167 ~~~~~g~v~~~s~~G~tG~~~-~~~~~~~~~i~~lr~~~-~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~ 239 (268)
T 1qop_A 167 ASYGRGYTYLLSRSGVTGAEN-RGALPLHHLIEKLKEYH-AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVK 239 (268)
T ss_dssp HHHCCSCEEEESSSSCCCSSS-CC--CCHHHHHHHHHTT-CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HhhCCCcEEEEecCCcCCCcc-CCCchHHHHHHHHHhcc-CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 1111110 11122257777776654 89999999999999999999999999999999865
No 109
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.36 E-value=1.6e-05 Score=77.75 Aligned_cols=187 Identities=10% Similarity=0.086 Sum_probs=108.8
Q ss_pred CCChHHHHHHHHHcCCCcEEEeccccchhhhhcc----cchhhhhcc-CCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 78 DWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ----GNLDRFLAF-SPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 78 gvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~----~~~~~~~~~-~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
++++......+.+.|...+.+-|-++.+--..+. ...+.+..+ .....|+.....-.. ..-++.+.++|+|
T Consensus 27 d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~----ide~qil~aaGAD 102 (297)
T 4adt_A 27 DVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGH----FVEAQILEELKVD 102 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTC----HHHHHHHHHTTCS
T ss_pred CCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCc----HHHHHHHHHcCCC
Confidence 5778888888888886667666644433111111 011222122 124679988864333 2344555689999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhh-ccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFI 231 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~ 231 (436)
.|+...+.+.. ++++.+++ ..+.++.+-+ .+.++... ..+.|+|.|.
T Consensus 103 ~Id~s~~~~~~--------------------~li~~i~~~~~g~~vvv~v-------~~~~Ea~~-----a~~~Gad~I~ 150 (297)
T 4adt_A 103 MLDESEVLTMA--------------------DEYNHINKHKFKTPFVCGC-------TNLGEALR-----RISEGASMIR 150 (297)
T ss_dssp EEEEETTSCCS--------------------CSSCCCCGGGCSSCEEEEE-------SSHHHHHH-----HHHHTCSEEE
T ss_pred EEEcCCCCCHH--------------------HHHHHHHhcCCCCeEEEEe-------CCHHHHHH-----HHhCCCCEEE
Confidence 99432221111 11122233 2467776632 23334322 2247999999
Q ss_pred EccCcccccCC--------------------CCCCC-----CCCCCccHHHHHHHHhcCCCcEEE--EeCCCCCHHHHHH
Q 013784 232 IHSRKALLNGI--------------------SPAEN-----RTIPPLKYEYYYALLRDFPDLTFT--LNGGINTVDEVNA 284 (436)
Q Consensus 232 vhgrt~~~~G~--------------------~~~~~-----~~i~~~~~~~v~~l~~~~~~iPVI--anGgI~s~~da~~ 284 (436)
++||.. .|. -+.++ ... ...++++.++.+.. ++||+ +.|||.+++++.+
T Consensus 151 v~g~~g--TG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~-~~~~~ll~~i~~~~-~iPVivvA~GGI~t~~dv~~ 226 (297)
T 4adt_A 151 TKGEAG--TGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKL-RAPIDLILLTRKLK-RLPVVNFAAGGIATPADAAM 226 (297)
T ss_dssp ECCCTT--SCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHH-TCCHHHHHHHHHHT-SCSSEEEEESCCCSHHHHHH
T ss_pred ECCCcC--CCchHHHHHHHHHhhhhhhhhccccccccccccccC-CCCHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHH
Confidence 998721 010 00011 000 12378888887765 77876 9999999999999
Q ss_pred HHHcCCCeeeehHHHHhCCc
Q 013784 285 ALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 285 ~l~~Gad~VmiGRa~l~~P~ 304 (436)
+++.|||+|++|++++..++
T Consensus 227 ~~~~GAdgVlVGsai~~a~d 246 (297)
T 4adt_A 227 CMQLGMDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHTTCSCEEESHHHHTSSC
T ss_pred HHHcCCCEEEEhHHHHcCCC
Confidence 99999999999999998655
No 110
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.35 E-value=9.1e-06 Score=82.03 Aligned_cols=142 Identities=13% Similarity=0.064 Sum_probs=108.6
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+...+...+++.+.+.|+.+.+.||+.|+++.||| +++...+++++|++++ ++++.+.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vD 196 (378)
T 2qdd_A 133 TPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS----------------DPAQDIARIEAISAGLPDGHRVTFD 196 (378)
T ss_dssp CCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS----------------CHHHHHHHHHHHHHSCCTTCEEEEE
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC----------------ChHHHHHHHHHHHHHhCCCCEEEEe
Confidence 344566666567899999999988888999999998875 3577889999999987 5788888
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
..-||+. ++..++ .+.++ .|+ +|. . .++ +++...++.+.. ++||++.+.+.+++
T Consensus 197 an~~~~~----~~a~~~-~~~l~-~~i-~iE-----q-----------P~~--d~~~~~~l~~~~-~iPI~~dE~~~~~~ 250 (378)
T 2qdd_A 197 VNRAWTP----AIAVEV-LNSVR-ARD-WIE-----Q-----------PCQ--TLDQCAHVARRV-ANPIMLDECLHEFS 250 (378)
T ss_dssp CTTCCCH----HHHHHH-HTSCC-CCC-EEE-----C-----------CSS--SHHHHHHHHTTC-CSCEEECTTCCSHH
T ss_pred CCCCCCH----HHHHHH-HHHhC-CCc-EEE-----c-----------CCC--CHHHHHHHHHhC-CCCEEECCCcCCHH
Confidence 8877753 344443 44556 777 552 1 111 477777877765 89999999999999
Q ss_pred HHHHHHH-cCCCeeeehHHHHhCCcch
Q 013784 281 EVNAALR-KGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 281 da~~~l~-~Gad~VmiGRa~l~~P~lf 306 (436)
++.++++ ..||.|++-.+-++.++-+
T Consensus 251 ~~~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 251 DHLAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHHhCCCCEEEecccccCCHHHH
Confidence 9999998 5699999988888777643
No 111
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.34 E-value=9.7e-06 Score=82.50 Aligned_cols=149 Identities=5% Similarity=-0.049 Sum_probs=110.9
Q ss_pred CCCcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCCh-HHHHHHHHHHhhcc--CCcEE
Q 013784 123 EQHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDP-KFVGEAMSVIAANT--NVPVS 198 (436)
Q Consensus 123 ~~~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~-~~l~eiv~av~~~~--~iPvs 198 (436)
+.-|+...+. +.+++.+.+.|+.+.+.||+.|.+++ ||. |+ ++ +...+++++|++++ ++++.
T Consensus 132 ~~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv---------G~----~~~~~~~e~v~avr~a~G~d~~l~ 197 (401)
T 2hzg_A 132 HGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI---------GR----GTVAADADQIMAAREGLGPDGDLM 197 (401)
T ss_dssp CCBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT---------TS----SCHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC---------CC----CHHHHHHHHHHHHHHHhCCCCeEE
Confidence 3446654544 67899999999999999999999996 653 32 44 77889999999977 58899
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHh-cCCCcEEEEeCCCC
Q 013784 199 VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLR-DFPDLTFTLNGGIN 277 (436)
Q Consensus 199 vKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~-~~~~iPVIanGgI~ 277 (436)
++..-||.. +.++..++ .+.+++.|+++|. . . +++.+++...++.+ .. ++||++.+.+.
T Consensus 198 vDan~~~~~--~~~~a~~~-~~~l~~~~i~~iE----q----P--------~~~~d~~~~~~l~~~~~-~iPI~~dE~~~ 257 (401)
T 2hzg_A 198 VDVGQIFGE--DVEAAAAR-LPTLDAAGVLWLE----E----P--------FDAGALAAHAALAGRGA-RVRIAGGEAAH 257 (401)
T ss_dssp EECTTTTTT--CHHHHHTT-HHHHHHTTCSEEE----C----C--------SCTTCHHHHHHHHTTCC-SSEEEECTTCS
T ss_pred EECCCCCCC--CHHHHHHH-HHHHHhcCCCEEE----C----C--------CCccCHHHHHHHHhhCC-CCCEEecCCcC
Confidence 988888720 12344443 4456789999874 1 1 12234777778776 55 89999999999
Q ss_pred CHHHHHHHHH-cCCCeeeehHHHHhCCcc
Q 013784 278 TVDEVNAALR-KGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 278 s~~da~~~l~-~Gad~VmiGRa~l~~P~l 305 (436)
+.+++.++++ ..||.|++-..-++.++-
T Consensus 258 ~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 286 (401)
T 2hzg_A 258 NFHMAQHLMDYGRIGFIQIDCGRIGGLGP 286 (401)
T ss_dssp SHHHHHHHHHHSCCSEEEECHHHHTSHHH
T ss_pred CHHHHHHHHHCCCCCEEEeCcchhCCHHH
Confidence 9999999998 569999998887776654
No 112
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.33 E-value=6.1e-06 Score=83.46 Aligned_cols=142 Identities=10% Similarity=0.026 Sum_probs=111.1
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+..++++.+|+.+++.++.+.+.||+.+.+++|| +++.-.+.+++||+++ ++++.++
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~-----------------~~~~d~~~v~avR~a~g~~~~l~vD 195 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG-----------------DVERDIARIRDVEDIREPGEIVLYD 195 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHTTSCCTTCEEEEE
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC-----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 45577778888999999999998888999999999886 2455678899999987 5789999
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
...+|+. ++..+ +++.+++.|+ +|. . .++ +++...++.+.. ++||++++.+.+.+
T Consensus 196 an~~~~~----~~a~~-~~~~l~~~~i-~iE-----q-----------P~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~ 250 (378)
T 3eez_A 196 VNRGWTR----QQALR-VMRATEDLHV-MFE-----Q-----------PGE--TLDDIAAIRPLH-SAPVSVDECLVTLQ 250 (378)
T ss_dssp CTTCCCH----HHHHH-HHHHTGGGTC-CEE-----C-----------CSS--SHHHHHHTGGGC-CCCEEECTTCCSHH
T ss_pred CCCCCCH----HHHHH-HHHHhccCCe-EEe-----c-----------CCC--CHHHHHHHHhhC-CCCEEECCCCCCHH
Confidence 8888863 23333 3456677887 663 1 111 367666766664 89999999999999
Q ss_pred HHHHHHH-cCCCeeeehHHHHhCCcch
Q 013784 281 EVNAALR-KGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 281 da~~~l~-~Gad~VmiGRa~l~~P~lf 306 (436)
++.++++ .++|.|++-.+-.+.++-+
T Consensus 251 ~~~~~l~~~~~d~v~ik~~~~GGit~~ 277 (378)
T 3eez_A 251 DAARVARDGLAEVFGIKLNRVGGLTRA 277 (378)
T ss_dssp HHHHHHHTTCCSEEEEEHHHHTSHHHH
T ss_pred HHHHHHHcCCCCEEEeCchhcCCHHHH
Confidence 9999998 5699999999988887754
No 113
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.30 E-value=9.9e-07 Score=83.67 Aligned_cols=79 Identities=15% Similarity=0.202 Sum_probs=62.3
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.++++|+|+|.++..... +.. ....++.+.++.+.+ ++||+++|+|.+.+++.++++.|||+|++|++
T Consensus 37 a~~~~~~Gad~i~v~d~~~~--~~~-------~~~~~~~i~~i~~~~-~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~ 106 (252)
T 1ka9_F 37 ARAYDEAGADELVFLDISAT--HEE-------RAILLDVVARVAERV-FIPLTVGGGVRSLEDARKLLLSGADKVSVNSA 106 (252)
T ss_dssp HHHHHHHTCSCEEEEECCSS--TTC-------HHHHHHHHHHHHTTC-CSCEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCCcc--ccC-------ccccHHHHHHHHHhC-CCCEEEECCcCCHHHHHHHHHcCCCEEEEChH
Confidence 44557799999999865431 110 112356677777765 89999999999999999999999999999999
Q ss_pred HHhCCcchh
Q 013784 299 AYQNPWYTL 307 (436)
Q Consensus 299 ~l~~P~lf~ 307 (436)
++.+|+++.
T Consensus 107 ~l~~p~~~~ 115 (252)
T 1ka9_F 107 AVRRPELIR 115 (252)
T ss_dssp HHHCTHHHH
T ss_pred HHhCcHHHH
Confidence 999998753
No 114
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.30 E-value=5.6e-06 Score=76.56 Aligned_cols=139 Identities=13% Similarity=0.199 Sum_probs=89.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
++.|++..|.+.+++++.+.++.+.+.|++.|++...+|.. .+.++.+++.+++++.+..-
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~-------------------~~~i~~i~~~~~~~l~vg~g 65 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW-------------------EQSIPAIVDAYGDKALIGAG 65 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH-------------------HHHHHHHHHHHTTTSEEEEE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-------------------HHHHHHHHHhCCCCeEEEec
Confidence 46889999999999999999999999999999998766531 01222222222333333110
Q ss_pred cCCCC--------------------------------------CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCC
Q 013784 203 IGVDD--------------------------------------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP 244 (436)
Q Consensus 203 ~G~~~--------------------------------------~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~ 244 (436)
. ..+ ..+.+++. ...+.|+|+|.++...
T Consensus 66 ~-~~~~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~g~~~~~g~~t~~e~~-----~a~~~G~d~v~v~~t~-------- 131 (212)
T 2v82_A 66 T-VLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAF-----TALEAGAQALKIFPSS-------- 131 (212)
T ss_dssp C-CCSHHHHHHHHHTTCCEEECSSCCHHHHHHHHHTTCEEECEECSHHHHH-----HHHHTTCSEEEETTHH--------
T ss_pred c-ccCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEeecCCHHHHH-----HHHHCCCCEEEEecCC--------
Confidence 0 000 01112211 1123566665553210
Q ss_pred CCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 245 AENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 245 ~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
+..++.+.++.+..+ ++||++.|||. .+++.++++.||++|.+|++++..
T Consensus 132 -------~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 132 -------AFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp -------HHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEECTTTCCT
T ss_pred -------CCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 112677777777664 59999999997 999999999999999999998765
No 115
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.30 E-value=1.4e-05 Score=80.43 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=103.9
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 126 PIVLQIGGSNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
|+..-+.+.+++.+++.|+.+.+ .||+.+.|+.||+ +++...+++++||+++ ++++.+...
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 196 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR----------------TPAQDLEHIRSIVKAVGDRASVRVDVN 196 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS----------------CHHHHHHHHHHHHHHHGGGCEEEEECT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC----------------ChHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 33333455689999999998888 9999999998764 2455678888888876 478888877
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
.+|+ .++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++
T Consensus 197 ~~~~----~~~a~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 254 (370)
T 1nu5_A 197 QGWD----EQTASIW-IPRLEEAGVELVE----Q------------PVPRANFGALRRLTEQN-GVAILADESLSSLSSA 254 (370)
T ss_dssp TCCC----HHHHHHH-HHHHHHHTCCEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHH
T ss_pred CCCC----HHHHHHH-HHHHHhcCcceEe----C------------CCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 7774 3344443 4567778998875 1 11223477777887775 8999999999999999
Q ss_pred HHHHH-cCCCeeeehHHHHhCCc
Q 013784 283 NAALR-KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 283 ~~~l~-~Gad~VmiGRa~l~~P~ 304 (436)
.++++ ..+|.|++--.-.+-.+
T Consensus 255 ~~~i~~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 255 FELARDHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp HHHHHTTCCSEEEECHHHHTSHH
T ss_pred HHHHHhCCCCEEEEchhhcCCHH
Confidence 99998 45999998665555443
No 116
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.27 E-value=1.9e-05 Score=80.18 Aligned_cols=135 Identities=10% Similarity=0.063 Sum_probs=104.0
Q ss_pred CcEEEEE-c-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 125 HPIVLQI-G-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 125 ~pi~vQL-~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
-|+...+ . +.+++.+++.++.+.+.||+.+.++.|| +++.-.+++++||+++ ++++.+.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~-----------------~~~~d~~~v~avR~a~g~d~~l~vD 201 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR-----------------APRKDAANLRAMRQRVGADVEILVD 201 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC-----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 5777777 4 6899999999998888999999999876 3566778888998876 5789888
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHH-hcCCCcEEEEeCCCCCH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL-RDFPDLTFTLNGGINTV 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~-~~~~~iPVIanGgI~s~ 279 (436)
..-+|+. ++..+ +++.+++.|+++|. . .+++.+++...++. +.. ++||++.+.+.+.
T Consensus 202 an~~~~~----~~A~~-~~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~~-~iPIa~dE~i~~~ 259 (389)
T 3ozy_A 202 ANQSLGR----HDALA-MLRILDEAGCYWFE----E------------PLSIDDIEGHRILRAQGT-PVRIATGENLYTR 259 (389)
T ss_dssp CTTCCCH----HHHHH-HHHHHHHTTCSEEE----S------------CSCTTCHHHHHHHHTTCC-SSEEEECTTCCHH
T ss_pred CCCCcCH----HHHHH-HHHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhcCC-CCCEEeCCCCCCH
Confidence 8888863 33333 34567789999885 1 11223477777777 654 8999999999999
Q ss_pred HHHHHHHH-cCCCeeeehHH
Q 013784 280 DEVNAALR-KGAHHVMVGRA 298 (436)
Q Consensus 280 ~da~~~l~-~Gad~VmiGRa 298 (436)
+++.++++ ..+|.|++--+
T Consensus 260 ~~~~~~i~~~~~d~v~ik~~ 279 (389)
T 3ozy_A 260 NAFNDYIRNDAIDVLQADAS 279 (389)
T ss_dssp HHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHcCCCCEEEeCcc
Confidence 99999998 56899987443
No 117
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.26 E-value=1.9e-06 Score=81.25 Aligned_cols=81 Identities=22% Similarity=0.243 Sum_probs=63.9
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.++++|+|+|+++..+....+. +. .+.+.++.+.. ++||+++|+|.+++++..+++.|||+|.+|++
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~---------~~-~~~i~~i~~~~-~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRG---------SN-HELLAEVVGKL-DVQVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSC---------CC-HHHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEEcCcccccCC---------Ch-HHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 445677999999998765422211 11 36677777765 89999999999999999999999999999999
Q ss_pred HHhCCcchhhhh
Q 013784 299 AYQNPWYTLGHV 310 (436)
Q Consensus 299 ~l~~P~lf~~~~ 310 (436)
++.+|+++.+.+
T Consensus 106 ~l~~p~~~~~~~ 117 (244)
T 2y88_A 106 ALENPQWCARVI 117 (244)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhhChHHHHHHH
Confidence 999998764433
No 118
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.26 E-value=1.9e-05 Score=79.19 Aligned_cols=141 Identities=8% Similarity=-0.001 Sum_probs=105.9
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
-|+...+.+.+++.+.+.|+.+.+.||+.+.++.||+ +++...+++++|++++ ++++.+...
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~d~~~v~avr~a~g~~~~l~vDan 193 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD----------------DIATDIARIQEIRKRVGSAVKLRLDAN 193 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS----------------CHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 4555677778999999999888888999999998762 3567778889998876 578888887
Q ss_pred cCCCCCCcHHHHHHHHHHHhhc--CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~--~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
-+|+. ++..++ .+.+++ .|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+
T Consensus 194 ~~~~~----~~a~~~-~~~l~~~~~~i~~iE-----q-----------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~ 251 (366)
T 1tkk_A 194 QGWRP----KEAVTA-IRKMEDAGLGIELVE-----Q-----------PVHKDDLAGLKKVTDAT-DTPIMADESVFTPR 251 (366)
T ss_dssp TCSCH----HHHHHH-HHHHHHTTCCEEEEE-----C-----------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHH
T ss_pred CCCCH----HHHHHH-HHHHhhcCCCceEEE-----C-----------CCCcccHHHHHHHHhhC-CCCEEEcCCCCCHH
Confidence 77743 344443 445677 7888774 1 12233477777887765 89999999999999
Q ss_pred HHHHHHH-cCCCeeeehHHHHhCC
Q 013784 281 EVNAALR-KGAHHVMVGRAAYQNP 303 (436)
Q Consensus 281 da~~~l~-~Gad~VmiGRa~l~~P 303 (436)
++.++++ ..+|.|++--.-.+-.
T Consensus 252 ~~~~~i~~~~~d~v~ik~~~~GGi 275 (366)
T 1tkk_A 252 QAFEVLQTRSADLINIKLMKAGGI 275 (366)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSH
T ss_pred HHHHHHHhCCCCEEEeehhhhcCH
Confidence 9999998 5699999865555443
No 119
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.25 E-value=9.1e-06 Score=78.37 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=100.8
Q ss_pred CCCcEEEEEcCCCH--HHHHHHHHHHHHCCCCEEEecCC--CCCCc---cccCC----CccccccCChHHHHHHHHHHhh
Q 013784 123 EQHPIVLQIGGSNL--DNLAKATELANAYNYDEINLNCG--CPSPK---VAGHG----CFGVSLMLDPKFVGEAMSVIAA 191 (436)
Q Consensus 123 ~~~pi~vQL~g~~p--~~~~~aA~~~~~~G~d~IdLN~g--cP~~~---v~r~g----~yG~~Ll~~~~~l~eiv~av~~ 191 (436)
....++.=|...+| +...+.++.+++.|+|.|||+.= -|... +.+.. ..| -+.+.+.++++++|+
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G----~~~~~~~~~v~~ir~ 91 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG----TTSSDCFDIITKVRA 91 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHh
Confidence 34567777777776 88899999999999999999843 33210 00000 012 345677889999998
Q ss_pred c-cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccC--------------------------cc-------
Q 013784 192 N-TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--------------------------KA------- 237 (436)
Q Consensus 192 ~-~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr--------------------------t~------- 237 (436)
. .++|+.+..=.+ ..-.+ -+.+|+. .+.++|+|.++++.- +.
T Consensus 92 ~~~~~Pivlm~Y~n--pv~~~-g~e~f~~-~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i 167 (267)
T 3vnd_A 92 QHPDMPIGLLLYAN--LVFAN-GIDEFYT-KAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMV 167 (267)
T ss_dssp HCTTCCEEEEECHH--HHHHH-CHHHHHH-HHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHH
T ss_pred cCCCCCEEEEecCc--HHHHh-hHHHHHH-HHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHH
Confidence 6 789977642111 00000 0112222 223456666665421 10
Q ss_pred -----------cccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 238 -----------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 238 -----------~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
...|..+.. ...++...+++.++++. .++||+..|||.+++++.+.+..|||+|.+|++++.
T Consensus 168 ~~~~~gfvY~vS~~GvTG~~-~~~~~~~~~~v~~vr~~-~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 168 SEQGEGYTYLLSRAGVTGTE-SKAGEPIENILTQLAEF-NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSAVVK 240 (267)
T ss_dssp HHHCCSCEEESCCCCCC---------CHHHHHHHHHTT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHhCCCcEEEEecCCCCCCc-cCCcHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 001222221 11222224666666554 489999999999999999899999999999998864
No 120
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.25 E-value=2.3e-05 Score=78.81 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=106.7
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+...+.+.+++.+++.|+.+.+.||+.+.|+.|. +++...+++++||+++ ++++.+.
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~~~e~v~avr~a~g~~~~l~vD 196 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG-----------------EPVTDAKRITAALANQQPDEFFIVD 196 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS-----------------CHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC-----------------CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34566677777899999999999999999999998763 3677889999999987 5788888
Q ss_pred eccCCCCCCcHHHHHHHHHHHh-hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~-e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
..-||+ .++..++ .+.+ ++.|+ +|. . + ++ +++...++.+.. ++||++.+.+.++
T Consensus 197 an~~~~----~~~a~~~-~~~l~~~~~i-~iE-----~------P-----~~--~~~~~~~l~~~~-~iPI~~dE~~~~~ 251 (371)
T 2ps2_A 197 ANGKLS----VETALRL-LRLLPHGLDF-ALE-----A------P-----CA--TWRECISLRRKT-DIPIIYDELATNE 251 (371)
T ss_dssp CTTBCC----HHHHHHH-HHHSCTTCCC-EEE-----C------C-----BS--SHHHHHHHHTTC-CSCEEESTTCCSH
T ss_pred CCCCcC----HHHHHHH-HHHHHhhcCC-cCc-----C------C-----cC--CHHHHHHHHhhC-CCCEEeCCCcCCH
Confidence 777774 3444454 4556 77888 653 1 0 11 377777777765 8999999999999
Q ss_pred HHHHHHHH-cCCCeeeehHHHHhCCc
Q 013784 280 DEVNAALR-KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 280 ~da~~~l~-~Gad~VmiGRa~l~~P~ 304 (436)
+++.++++ ..||.|++--.-.+..+
T Consensus 252 ~~~~~~i~~~~~d~v~ik~~~~GGit 277 (371)
T 2ps2_A 252 MSIVKILADDAAEGIDLKISKAGGLT 277 (371)
T ss_dssp HHHHHHHHHTCCSEEEEEHHHHTSHH
T ss_pred HHHHHHHHhCCCCEEEechhhcCCHH
Confidence 99999998 56999998766655443
No 121
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.24 E-value=2.1e-05 Score=79.82 Aligned_cols=132 Identities=8% Similarity=0.037 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
+.+++.+++.|+.+.+.||+.|.|+.|+. .++...+++++||+++ ++++.++..-||+
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~----------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~---- 206 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD----------------SLSISIQFVEKVREIVGDELPLMLDLAVPED---- 206 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS----------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSC----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC----------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC----
Confidence 56899999999999999999999987621 1577889999999976 5889998887775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cC
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~G 289 (436)
.++..++ .+.+++.|+++|.- . +++.+++...++.+.. ++||++.+.+.+++++.++++ ..
T Consensus 207 ~~~a~~~-~~~l~~~~i~~iEq--------P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~ 268 (391)
T 2qgy_A 207 LDQTKSF-LKEVSSFNPYWIEE--------P--------VDGENISLLTEIKNTF-NMKVVTGEKQSGLVHFRELISRNA 268 (391)
T ss_dssp HHHHHHH-HHHHGGGCCSEEEC--------S--------SCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHH-HHHHHhcCCCeEeC--------C--------CChhhHHHHHHHHhhC-CCCEEEcCCcCCHHHHHHHHHcCC
Confidence 3344454 45578899998751 1 1223477777887765 899999999999999999998 45
Q ss_pred CCeeeehHHHHhC
Q 013784 290 AHHVMVGRAAYQN 302 (436)
Q Consensus 290 ad~VmiGRa~l~~ 302 (436)
+|.|++-..-.+.
T Consensus 269 ~d~v~ik~~~~GG 281 (391)
T 2qgy_A 269 ADIFNPDISGMGG 281 (391)
T ss_dssp CSEECCBTTTSSC
T ss_pred CCEEEECcchhCC
Confidence 8999975444333
No 122
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.22 E-value=1.1e-05 Score=81.94 Aligned_cols=139 Identities=8% Similarity=-0.000 Sum_probs=105.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCC---ccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCC
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSP---KVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDD 207 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~---~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~ 207 (436)
+.+++++++.|+.+.+.||+.+.|+.||+.. .+ + ..||++..++++...+++++||+++ ++++.+...-+|+
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~-~-~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~- 211 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQ-H-VTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLT- 211 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEE-C-CBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccccccccccc-c-cccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC-
Confidence 3579999999999989999999999987431 11 2 2577777788899999999999976 5778887776664
Q ss_pred CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH
Q 013784 208 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 287 (436)
Q Consensus 208 ~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~ 287 (436)
.++..++ .+.+++.|+++|.- .+++.+++...++.+.. ++||++.+.+.+.++++++++
T Consensus 212 ---~~~a~~~-~~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~ 270 (392)
T 2poz_A 212 ---TDETIRF-CRKIGELDICFVEE----------------PCDPFDNGALKVISEQI-PLPIAVGERVYTRFGFRKIFE 270 (392)
T ss_dssp ---HHHHHHH-HHHHGGGCEEEEEC----------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHT
T ss_pred ---HHHHHHH-HHHHHhcCCCEEEC----------------CCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHH
Confidence 3444554 44578889887641 11223477777887765 899999999999999999998
Q ss_pred c-CCCeeee
Q 013784 288 K-GAHHVMV 295 (436)
Q Consensus 288 ~-Gad~Vmi 295 (436)
. .+|.|++
T Consensus 271 ~~~~d~v~i 279 (392)
T 2poz_A 271 LQACGIIQP 279 (392)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
Confidence 4 5898885
No 123
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.21 E-value=8.9e-05 Score=71.64 Aligned_cols=139 Identities=12% Similarity=0.119 Sum_probs=94.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+.|+...=|.-++.++.+ +.++|+|+|=|...+ -.++.+.++++..++ .|+.+.+-+
T Consensus 112 v~lPvl~kdfiid~~qv~~----A~~~GAD~VlLi~a~----------------l~~~~l~~l~~~a~~-lGl~~lvev- 169 (272)
T 3qja_A 112 VSIPVLRKDFVVQPYQIHE----ARAHGADMLLLIVAA----------------LEQSVLVSMLDRTES-LGMTALVEV- 169 (272)
T ss_dssp CSSCEEEESCCCSHHHHHH----HHHTTCSEEEEEGGG----------------SCHHHHHHHHHHHHH-TTCEEEEEE-
T ss_pred CCCCEEECccccCHHHHHH----HHHcCCCEEEEeccc----------------CCHHHHHHHHHHHHH-CCCcEEEEc-
Confidence 3578887767777764433 346899999775321 123446667666654 466654432
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~d 281 (436)
.+.+++.. .. +.|+|.|-+.+|... .. +.+++.+.++++..+ ++|||+.|||.+++|
T Consensus 170 ------~t~ee~~~----A~-~~Gad~IGv~~r~l~--~~---------~~dl~~~~~l~~~v~~~~pvVaegGI~t~ed 227 (272)
T 3qja_A 170 ------HTEQEADR----AL-KAGAKVIGVNARDLM--TL---------DVDRDCFARIAPGLPSSVIRIAESGVRGTAD 227 (272)
T ss_dssp ------SSHHHHHH----HH-HHTCSEEEEESBCTT--TC---------CBCTTHHHHHGGGSCTTSEEEEESCCCSHHH
T ss_pred ------CCHHHHHH----HH-HCCCCEEEECCCccc--cc---------ccCHHHHHHHHHhCcccCEEEEECCCCCHHH
Confidence 33444322 22 469999999877531 11 122455667776665 799999999999999
Q ss_pred HHHHHHcCCCeeeehHHHHhCCcc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+.++++.|||+|.||++++..++.
T Consensus 228 v~~l~~~GadgvlVGsal~~a~dp 251 (272)
T 3qja_A 228 LLAYAGAGADAVLVGEGLVTSGDP 251 (272)
T ss_dssp HHHHHHTTCSEEEECHHHHTCSCH
T ss_pred HHHHHHcCCCEEEEcHHHhCCCCH
Confidence 999999999999999999988774
No 124
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.21 E-value=2.8e-06 Score=80.28 Aligned_cols=81 Identities=21% Similarity=0.247 Sum_probs=63.8
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.++++|+|+|+++..+....+. ... +.+.++.+.. ++||+++|+|.+++++..+++.|||+|.+|+.
T Consensus 38 a~~~~~~Gad~i~v~~~d~~~~~~---------~~~-~~i~~i~~~~-~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 38 ALAWQRSGAEWLHLVDLDAAFGTG---------DNR-ALIAEVAQAM-DIKVELSGGIRDDDTLAAALATGCTRVNLGTA 106 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHTSC---------CCH-HHHHHHHHHC-SSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHcCCCEEEEecCchhhcCC---------ChH-HHHHHHHHhc-CCcEEEECCcCCHHHHHHHHHcCCCEEEECch
Confidence 455677999999998765432221 112 6677777765 89999999999999999999999999999999
Q ss_pred HHhCCcchhhhh
Q 013784 299 AYQNPWYTLGHV 310 (436)
Q Consensus 299 ~l~~P~lf~~~~ 310 (436)
++.+|+++.+.+
T Consensus 107 ~l~~p~~~~~~~ 118 (244)
T 1vzw_A 107 ALETPEWVAKVI 118 (244)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhhCHHHHHHHH
Confidence 999998764433
No 125
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.16 E-value=1.8e-05 Score=76.51 Aligned_cols=169 Identities=17% Similarity=0.148 Sum_probs=96.4
Q ss_pred CcEEEEEcCCC--HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc----------CChHHHHHHHHHHhhc
Q 013784 125 HPIVLQIGGSN--LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAAN 192 (436)
Q Consensus 125 ~pi~vQL~g~~--p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll----------~~~~~l~eiv~av~~~ 192 (436)
..++.=|...+ .+...+.++.+.+.|+|.|||+.=...+. . | |-... -+.+.+.++++++|+.
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~-a--D--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~ 94 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPL-A--D--GPTIQGANLRALAAKTTPDICFELIAQIRAR 94 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGG-G--C--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-C--C--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 44565555545 58888899999999999999985432211 1 1 11111 2456778899999886
Q ss_pred -cCCcEEEEecc------C------------CCC----CCcHHHHHHHHHHHhhcCCccEEEEc-cCcc-----------
Q 013784 193 -TNVPVSVKCRI------G------------VDD----HDSYNQLCDFIYKVSSLSPTRHFIIH-SRKA----------- 237 (436)
Q Consensus 193 -~~iPvsvKiR~------G------------~~~----~~~~~~~~~~la~~~e~~Gvd~I~vh-grt~----------- 237 (436)
.++|+.+..=. | .+. .-..++..+ +...+++.|++.|.+- ..+.
T Consensus 95 ~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~-~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 95 NPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQP-FVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp CTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHH-HHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHH-HHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 78998775311 1 110 000111111 1223334444433221 1110
Q ss_pred ---c----ccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 238 ---L----LNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 238 ---~----~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
. ..|..+.. ..+++...+++.++++. .++||+..+||.+++++.+++..|||+|.+|+++..
T Consensus 174 ~gfiY~vs~~GvTG~~-~~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 174 KGYTYLLSRAGVTGAE-TKANMPVHALLERLQQF-DAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVK 242 (271)
T ss_dssp CSCEEECCCC---------CCHHHHHHHHHHHHT-TCCCEEECSSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CCeEEEEeccCCCCcc-cCCchhHHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHH
Confidence 0 01222221 11222224566666655 489999999999999999899999999999999974
No 126
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.12 E-value=0.00033 Score=67.60 Aligned_cols=145 Identities=12% Similarity=0.069 Sum_probs=101.0
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+-|+..+=|..++.+.. .+..+|+|+|=|+..+ -+.+.+.++++..++ .|+-+.+-+
T Consensus 119 v~lPVl~Kdfi~d~~qi~----ea~~~GAD~VlLi~a~----------------L~~~~l~~l~~~a~~-lGl~~lvev- 176 (272)
T 3tsm_A 119 CSLPALRKDFLFDPYQVY----EARSWGADCILIIMAS----------------VDDDLAKELEDTAFA-LGMDALIEV- 176 (272)
T ss_dssp SSSCEEEESCCCSTHHHH----HHHHTTCSEEEEETTT----------------SCHHHHHHHHHHHHH-TTCEEEEEE-
T ss_pred cCCCEEECCccCCHHHHH----HHHHcCCCEEEEcccc----------------cCHHHHHHHHHHHHH-cCCeEEEEe-
Confidence 467898888878887543 3457899999887542 123557777776655 365444432
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~d 281 (436)
.+.+|+.. . .+.|+|.|-+..|.- ... ..+++...++++..+ ++|||+-|||.+++|
T Consensus 177 ------h~~eEl~~----A-~~~ga~iIGinnr~l--~t~---------~~dl~~~~~L~~~ip~~~~vIaesGI~t~ed 234 (272)
T 3tsm_A 177 ------HDEAEMER----A-LKLSSRLLGVNNRNL--RSF---------EVNLAVSERLAKMAPSDRLLVGESGIFTHED 234 (272)
T ss_dssp ------CSHHHHHH----H-TTSCCSEEEEECBCT--TTC---------CBCTHHHHHHHHHSCTTSEEEEESSCCSHHH
T ss_pred ------CCHHHHHH----H-HhcCCCEEEECCCCC--ccC---------CCChHHHHHHHHhCCCCCcEEEECCCCCHHH
Confidence 24444422 2 368999998887753 111 123566667777665 699999999999999
Q ss_pred HHHHHHcCCCeeeehHHHHhCCcchhhhhhh
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPWYTLGHVDT 312 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~ 312 (436)
+.++.+.|||+|.||++++..++. ...+..
T Consensus 235 v~~l~~~Ga~gvLVG~almr~~d~-~~~~~~ 264 (272)
T 3tsm_A 235 CLRLEKSGIGTFLIGESLMRQHDV-AAATRA 264 (272)
T ss_dssp HHHHHTTTCCEEEECHHHHTSSCH-HHHHHH
T ss_pred HHHHHHcCCCEEEEcHHHcCCcCH-HHHHHH
Confidence 999999999999999999999886 344433
No 127
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.11 E-value=2.5e-05 Score=71.99 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=91.9
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+.+.+.-.++.. ..++.+.++|+|+|-++...+ .+.+.++++.+++. ++++.+-+.
T Consensus 53 ~~~i~~~~~~~~~~~--~~~~~~~~~Gad~v~v~~~~~-----------------~~~~~~~~~~~~~~-g~~~~v~~~- 111 (211)
T 3f4w_A 53 HKEVLADAKIMDGGH--FESQLLFDAGADYVTVLGVTD-----------------VLTIQSCIRAAKEA-GKQVVVDMI- 111 (211)
T ss_dssp TSEEEEEEEECSCHH--HHHHHHHHTTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEECT-
T ss_pred CCEEEEEEEeccchH--HHHHHHHhcCCCEEEEeCCCC-----------------hhHHHHHHHHHHHc-CCeEEEEec-
Confidence 578888876555433 235667789999998864311 13355666666554 555544211
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+ ..+..+.+ +.+.+.|+|.|.++.... |.. .++..++.+.++++..+++||++.|||. ++++.
T Consensus 112 ~---~~t~~~~~----~~~~~~g~d~i~v~~g~~---g~~------~~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~ 174 (211)
T 3f4w_A 112 C---VDDLPARV----RLLEEAGADMLAVHTGTD---QQA------AGRKPIDDLITMLKVRRKARIAVAGGIS-SQTVK 174 (211)
T ss_dssp T---CSSHHHHH----HHHHHHTCCEEEEECCHH---HHH------TTCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHH
T ss_pred C---CCCHHHHH----HHHHHcCCCEEEEcCCCc---ccc------cCCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHH
Confidence 1 12222222 223458999998863221 100 0111267777777765689999999995 99999
Q ss_pred HHHHcCCCeeeehHHHHhCCc
Q 013784 284 AALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 284 ~~l~~Gad~VmiGRa~l~~P~ 304 (436)
++++.|||+|.+||+++..++
T Consensus 175 ~~~~~Gad~vvvGsai~~~~d 195 (211)
T 3f4w_A 175 DYALLGPDVVIVGSAITHAAD 195 (211)
T ss_dssp HHHTTCCSEEEECHHHHTCSS
T ss_pred HHHHcCCCEEEECHHHcCCCC
Confidence 999999999999999988765
No 128
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.10 E-value=4.8e-05 Score=77.54 Aligned_cols=133 Identities=13% Similarity=0.115 Sum_probs=100.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC----CCCCCccccCCCcccccc--CChHHHHHHHHHHhhcc--CCcEEEEeccCCC
Q 013784 135 NLDNLAKATELANAYNYDEINLNC----GCPSPKVAGHGCFGVSLM--LDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 206 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~----gcP~~~v~r~g~yG~~Ll--~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~ 206 (436)
+++.+++.|+.+.+.||+.+.++. |+... . ||+++. ++++...+++++||+++ ++++.+...-+|+
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~-----~-~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~ 222 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR-----D-FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFD 222 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS-----C-SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC-----C-cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 789999999999899999999998 55321 1 566665 46788899999999976 4677777666663
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
.++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.+++
T Consensus 223 ----~~~a~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 280 (410)
T 2qq6_A 223 ----IPSSIRF-ARAMEPFGLLWLE----E------------PTPPENLDALAEVRRST-STPICAGENVYTRFDFRELF 280 (410)
T ss_dssp ----HHHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHH
T ss_pred ----HHHHHHH-HHHHhhcCCCeEE----C------------CCChhhHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHH
Confidence 3455554 4557889998875 1 11223477777777765 89999999999999999999
Q ss_pred Hc-CCCeeee
Q 013784 287 RK-GAHHVMV 295 (436)
Q Consensus 287 ~~-Gad~Vmi 295 (436)
+. .+|.|++
T Consensus 281 ~~~~~d~v~i 290 (410)
T 2qq6_A 281 AKRAVDYVMP 290 (410)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 85 4898886
No 129
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.10 E-value=4.6e-05 Score=77.44 Aligned_cols=137 Identities=15% Similarity=0.046 Sum_probs=99.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCC
Q 013784 135 NLDNLAKATELANAYNYDEINLNC------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 206 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~------gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~ 206 (436)
+++++++.|+.+.+.||+.+.|+. |++... ...|....++++...+++++||+++ ++++.+...-+|+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s----~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV----FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD 221 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC----CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC----cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 899999999999899999999996 664211 1113222346688889999999976 5788887776664
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
.++..++ .+.+++.|+++|. . . +++.+++...++.+.. ++||++.+.+.+.+++++++
T Consensus 222 ----~~~ai~~-~~~l~~~~i~~iE----~----P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 279 (403)
T 2ox4_A 222 ----LVSAIQF-AKAIEEFNIFFYE----E----I--------NTPLNPRLLKEAKKKI-DIPLASGERIYSRWGFLPFL 279 (403)
T ss_dssp ----HHHHHHH-HHHHGGGCEEEEE----C----C--------SCTTSTHHHHHHHHTC-CSCEEECTTCCHHHHHHHHH
T ss_pred ----HHHHHHH-HHHHHhhCCCEEe----C----C--------CChhhHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHH
Confidence 3445554 4457888988764 1 1 1223367777777765 89999999999999999999
Q ss_pred Hc-CCCeeeehH
Q 013784 287 RK-GAHHVMVGR 297 (436)
Q Consensus 287 ~~-Gad~VmiGR 297 (436)
+. .+|.|++--
T Consensus 280 ~~~~~d~v~ik~ 291 (403)
T 2ox4_A 280 EDRSIDVIQPDL 291 (403)
T ss_dssp HTTCCSEECCCH
T ss_pred HcCCCCEEecCc
Confidence 84 589988643
No 130
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.09 E-value=4.2e-06 Score=78.65 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=62.7
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.++++|+|+|+++..... +.. .+..++.+.++.+.. ++||+++|+|.+++++.++++.|||+|++|+.
T Consensus 39 a~~~~~~G~d~i~v~~~~~~--~~~-------~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 39 AVRYEEEGADEIAILDITAA--PEG-------RATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp HHHHHHTTCSCEEEEECCCC--TTT-------HHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHcCCCEEEEEeCCcc--ccC-------CcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 44567899999999865431 100 112366777777765 89999999999999999999999999999999
Q ss_pred HHhCCcchhh
Q 013784 299 AYQNPWYTLG 308 (436)
Q Consensus 299 ~l~~P~lf~~ 308 (436)
++.+|+++.+
T Consensus 109 ~~~~~~~~~~ 118 (253)
T 1h5y_A 109 AVRNPQLVAL 118 (253)
T ss_dssp HHHCTHHHHH
T ss_pred HhhCcHHHHH
Confidence 9999997644
No 131
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.09 E-value=1.7e-05 Score=75.46 Aligned_cols=148 Identities=13% Similarity=0.253 Sum_probs=92.9
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cCCcEEEEecc
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSVKCRI 203 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~iPvsvKiR~ 203 (436)
.++-+|+.|.--. + +.++.+-+.|+|-|-+| +....+|+++.++.+..-+. .-+-+.+|..-
T Consensus 74 ~~~pl~vGGGIrs-~-e~~~~~l~~GadkVii~---------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~ 136 (243)
T 4gj1_A 74 VSVNLQVGGGIRS-K-EEVKALLDCGVKRVVIG---------------SMAIKDATLCLEILKEFGSEAIVLALDTILKE 136 (243)
T ss_dssp CCSEEEEESSCCC-H-HHHHHHHHTTCSEEEEC---------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESS
T ss_pred cCCCeEecccccc-H-HHHHHHHHcCCCEEEEc---------------cccccCCchHHHHHhcccCceEEEEEEEEeCC
Confidence 4567899875322 1 23344557799987665 33457899999988876432 22234444332
Q ss_pred -------CCCCCCcHHHHHHHHHHHhhcCCccEEEEcc--CcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 204 -------GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS--RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 204 -------G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhg--rt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
||...... ++.++ .+.+++.|+..|.++. |.....|. +++++..+.+.++++|||++|
T Consensus 137 ~~~v~~~gw~~~~~~-~~~~~-~~~~~~~g~~eil~t~Id~DGt~~G~-----------d~~l~~~l~~~~~~ipviasG 203 (243)
T 4gj1_A 137 DYVVAVNAWQEASDK-KLMEV-LDFYSNKGLKHILCTDISKDGTMQGV-----------NVRLYKLIHEIFPNICIQASG 203 (243)
T ss_dssp SEEEC--------CC-BHHHH-HHHHHTTTCCEEEEEETTC-----CC-----------CHHHHHHHHHHCTTSEEEEES
T ss_pred CCEEEecCceecccc-hHHHH-HHHHhhcCCcEEEeeeecccccccCC-----------CHHHHHHHHHhcCCCCEEEEc
Confidence 45442211 12233 2345679999999974 33333332 378888887777789999999
Q ss_pred CCCCHHHHHHHHHcCCCeeeehHHHHhCC
Q 013784 275 GINTVDEVNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~VmiGRa~l~~P 303 (436)
||.+.+|+.++ +.++++|.+|++++..-
T Consensus 204 Gv~~~~Dl~~l-~~~~~gvivg~Al~~g~ 231 (243)
T 4gj1_A 204 GVASLKDLENL-KGICSGVIVGKALLDGV 231 (243)
T ss_dssp CCCSHHHHHHT-TTTCSEEEECHHHHTTS
T ss_pred CCCCHHHHHHH-HccCchhehHHHHHCCC
Confidence 99999999875 56799999999987654
No 132
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.06 E-value=6.5e-05 Score=76.19 Aligned_cols=125 Identities=15% Similarity=0.117 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++.++++|+.+.+.||+.|.++.|- .+++...+++++||+++ ++++.+...-||+ .+
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~----~~ 221 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ----------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWD----RP 221 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC----------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC----------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCC----HH
Confidence 89999999999999999999997651 24788889999999976 5888888776774 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCC
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAH 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad 291 (436)
+..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.++++++++++. .||
T Consensus 222 ~a~~~-~~~l~~~~i~~iE-----~-----------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 283 (393)
T 2og9_A 222 TAQRM-CRIFEPFNLVWIE-----E-----------PLDAYDHEGHAALALQF-DTPIATGEMLTSAAEHGDLIRHRAAD 283 (393)
T ss_dssp HHHHH-HHHHGGGCCSCEE-----C-----------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHH-HHHHHhhCCCEEE-----C-----------CCCcccHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHHHCCCCC
Confidence 44454 4557788999874 1 11223477777777765 8999999999999999999985 489
Q ss_pred eeeehH
Q 013784 292 HVMVGR 297 (436)
Q Consensus 292 ~VmiGR 297 (436)
.|++--
T Consensus 284 ~v~ik~ 289 (393)
T 2og9_A 284 YLMPDA 289 (393)
T ss_dssp EECCCH
T ss_pred EEeeCc
Confidence 988643
No 133
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.06 E-value=6.1e-05 Score=76.48 Aligned_cols=135 Identities=11% Similarity=0.119 Sum_probs=99.9
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
-|+...+...+++.+.+.|+.+.+.||+.+.++.|+ +++...+++++||+.+ ++++.+...
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~~~e~v~avR~a~g~d~~l~vDan 197 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG-----------------PLKADIAMVAEVRRAVGDDVDLFIDIN 197 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSCEEEECT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC-----------------CHHHHHHHHHHHHHhhCCCCEEEEECC
Confidence 344444443689999999998888899999998662 4567788899999876 578888877
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-||+ .++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++
T Consensus 198 ~~~~----~~~a~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 255 (397)
T 2qde_A 198 GAWT----YDQALTT-IRALEKYNLSKIE----Q------------PLPAWDLDGMARLRGKV-ATPIYADESAQELHDL 255 (397)
T ss_dssp TCCC----HHHHHHH-HHHHGGGCCSCEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHH
T ss_pred CCCC----HHHHHHH-HHHHHhCCCCEEE----C------------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCHHHH
Confidence 6774 3444454 4567888998775 1 11223477777777765 8999999999999999
Q ss_pred HHHHH-cCCCeeeehHH
Q 013784 283 NAALR-KGAHHVMVGRA 298 (436)
Q Consensus 283 ~~~l~-~Gad~VmiGRa 298 (436)
.++++ ..+|.|++--.
T Consensus 256 ~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 256 LAIINKGAADGLMIKTQ 272 (397)
T ss_dssp HHHHHHTCCSEEEECHH
T ss_pred HHHHHcCCCCEEEEecc
Confidence 99998 55999997433
No 134
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.04 E-value=5.8e-06 Score=76.75 Aligned_cols=148 Identities=13% Similarity=0.090 Sum_probs=97.3
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCcc--------ccCCCccccccCChHHHHHHHHH-------
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKV--------AGHGCFGVSLMLDPKFVGEAMSV------- 188 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v--------~r~g~yG~~Ll~~~~~l~eiv~a------- 188 (436)
+.|++.-+-+.+++++.+.++.+.+.|++.|+++.-+|.... ...-.+|. ++ +.+.+...+.+
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 468899999989888888888888999999999987774211 00012243 22 33433333222
Q ss_pred ----------HhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHH
Q 013784 189 ----------IAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 258 (436)
Q Consensus 189 ----------v~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v 258 (436)
.++ .++|+.. |. .+.+++.+ +.+.|+|+|.+++-.. .+ ..+++
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~----G~---~t~~e~~~-----A~~~Gad~v~~fpa~~-~g-------------G~~~l 142 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLP----GV---LTPTEVER-----ALALGLSALKFFPAEP-FQ-------------GVRVL 142 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEE----EE---CSHHHHHH-----HHHTTCCEEEETTTTT-TT-------------HHHHH
T ss_pred CCCCHHHHHHHHH-hCCCEEe----cC---CCHHHHHH-----HHHCCCCEEEEecCcc-cc-------------CHHHH
Confidence 111 2344322 21 23444332 2358999999975110 00 15667
Q ss_pred HHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 259 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 259 ~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
..+...++++||++.|||. .+++.+++++|+++|.+|++++.
T Consensus 143 k~l~~~~~~ipvvaiGGI~-~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 143 RAYAEVFPEVRFLPTGGIK-EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHHHHHCTTCEEEEBSSCC-GGGHHHHHTCSSBSCEEESGGGS
T ss_pred HHHHhhCCCCcEEEeCCCC-HHHHHHHHhCCCcEEEEehhhhC
Confidence 7777766789999999996 79999999999999999999876
No 135
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.02 E-value=0.00019 Score=72.63 Aligned_cols=124 Identities=9% Similarity=-0.034 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++.+++.|+.+.+.||+.+.|+.|+ .+++...+++++||+++ ++++.+...-||+ .+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~----~~ 204 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH----------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWT----SK 204 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC----------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBC----HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC----------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCC----HH
Confidence 89999999999989999999999776 23567789999999987 4778887776664 33
Q ss_pred HHHHHHHHHhhc--CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-C
Q 013784 213 QLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-G 289 (436)
Q Consensus 213 ~~~~~la~~~e~--~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-G 289 (436)
+..++ .+.+++ .++++|. . .+++.+++...++.+...++||++.+.+ +.+++.++++. .
T Consensus 205 ~a~~~-~~~l~~~g~~i~~iE-----q-----------P~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~ 266 (389)
T 2oz8_A 205 EALTK-LVAIREAGHDLLWVE-----D-----------PILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHA 266 (389)
T ss_dssp HHHHH-HHHHHHTTCCCSEEE-----S-----------CBCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTC
T ss_pred HHHHH-HHHHHhcCCCceEEe-----C-----------CCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCC
Confidence 44444 345677 6776653 1 1122347777777765327999999999 99999999984 5
Q ss_pred CCeeeeh
Q 013784 290 AHHVMVG 296 (436)
Q Consensus 290 ad~VmiG 296 (436)
+|.|++.
T Consensus 267 ~d~v~ik 273 (389)
T 2oz8_A 267 ADILNVH 273 (389)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999997
No 136
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.02 E-value=8.3e-05 Score=72.01 Aligned_cols=145 Identities=12% Similarity=0.114 Sum_probs=93.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHH
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~ 213 (436)
...+.-..-++.+.+.|+|.||+..- +|..+..+.+.+.+-+.+|++.++-|+ +|+=+-... -+.++
T Consensus 123 ~~~~~Kv~Ea~~Ai~~GAdEIDmVIN-----------ig~lk~g~~~~v~~eI~~V~~a~~~~~-lKVIlEt~~-Lt~ee 189 (288)
T 3oa3_A 123 YSTDQKVSEAKRAMQNGASELDMVMN-----------YPWLSEKRYTDVFQDIRAVRLAAKDAI-LKVILETSQ-LTADE 189 (288)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC-----------HHHHHTTCHHHHHHHHHHHHHHTTTSE-EEEECCGGG-CCHHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEee-----------hhhhcCCcHHHHHHHHHHHHHHhcCCC-ceEEEECCC-CCHHH
Confidence 34455555566777889999995431 244444677888888899998876563 555432111 12334
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCC-
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAH- 291 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad- 291 (436)
+.. ..+++.++|+|+|-.. | |++.. + -...+..++.++++.. .+++|.++|||.+.+++.++++.||+
T Consensus 190 i~~-A~~ia~eaGADfVKTS--T----Gf~~~-G--AT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~R 259 (288)
T 3oa3_A 190 IIA-GCVLSSLAGADYVKTS--T----GFNGP-G--ASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAER 259 (288)
T ss_dssp HHH-HHHHHHHTTCSEEECC--C----SSSSC-C--CCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHH-HHHHHHHcCCCEEEcC--C----CCCCC-C--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 443 4566778999999765 2 22110 0 0112355666666532 47999999999999999999999999
Q ss_pred -eeeehHHHHh
Q 013784 292 -HVMVGRAAYQ 301 (436)
Q Consensus 292 -~VmiGRa~l~ 301 (436)
|+-.|+.++.
T Consensus 260 iGtS~g~~I~~ 270 (288)
T 3oa3_A 260 LGASAGVKIVN 270 (288)
T ss_dssp EEESCHHHHHH
T ss_pred eehhhHHHHHH
Confidence 6666666653
No 137
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.01 E-value=3.4e-05 Score=72.89 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccCCCCCCcHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G~~~~~~~~~ 213 (436)
..+.-..-++.+.+.|+|.||+..- +|.-...+.+.+.+-+.+|++.++ .++-|-+-.|.- +-++
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmViN-----------ig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---t~ee 158 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVIN-----------IGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL---TNEE 158 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECC-----------HHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---CHHH
T ss_pred chHHHHHHHHHHHHcCCCEEEEEee-----------hHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC---CHHH
Confidence 4455555566777789999998641 344444677888888888888764 333333333321 2233
Q ss_pred HHHHHHHHhhcCCccEEEEc-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCC-
Q 013784 214 LCDFIYKVSSLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH- 291 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vh-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad- 291 (436)
+.. +.+++.++|+|+|-.. |-.. +|.+ ..+.+.+.+.+. .+++|.++|||++.+|+.++++.||+
T Consensus 159 i~~-a~~ia~~aGADfVKTSTGf~~--ggAt--------~~dv~lmr~~vg--~~v~VKasGGIrt~~da~~~i~aGA~r 225 (239)
T 3ngj_A 159 KVE-VCKRCVAAGAEYVKTSTGFGT--HGAT--------PEDVKLMKDTVG--DKALVKAAGGIRTFDDAMKMINNGASR 225 (239)
T ss_dssp HHH-HHHHHHHHTCSEEECCCSSSS--CCCC--------HHHHHHHHHHHG--GGSEEEEESSCCSHHHHHHHHHTTEEE
T ss_pred HHH-HHHHHHHHCcCEEECCCCCCC--CCCC--------HHHHHHHHHhhC--CCceEEEeCCCCCHHHHHHHHHhcccc
Confidence 333 4556678999999875 2211 1111 112334444443 27999999999999999999999999
Q ss_pred -eeeehHHHH
Q 013784 292 -HVMVGRAAY 300 (436)
Q Consensus 292 -~VmiGRa~l 300 (436)
|+-.|+.++
T Consensus 226 iGtS~~~~I~ 235 (239)
T 3ngj_A 226 IGASAGIAIL 235 (239)
T ss_dssp EEESCHHHHH
T ss_pred eecccHHHHH
Confidence 555555554
No 138
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.00 E-value=9.1e-06 Score=78.16 Aligned_cols=160 Identities=13% Similarity=0.126 Sum_probs=91.0
Q ss_pred CCcEEEEEcCCCHH-HHHHHHHHHHHCCCCEEEecCCCCC-CccccCCCccccccCChHHHHHHHHHHhhc--cCCcEEE
Q 013784 124 QHPIVLQIGGSNLD-NLAKATELANAYNYDEINLNCGCPS-PKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNVPVSV 199 (436)
Q Consensus 124 ~~pi~vQL~g~~p~-~~~~aA~~~~~~G~d~IdLN~gcP~-~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~--~~iPvsv 199 (436)
+.|+..|+.+.+|- .+....+.++++||.++ +|. |. ..+ .|.|...|+.+.--..+.++.|+.+ .|+ +|+
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvgli--dG~fr~~LEE~gm~~~~eve~I~~A~~~gL-~Ti 167 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLI--DGLFRQNLEETGMSYAQEVEMIAEAHKLDL-LTT 167 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGC--CHHHHHHHHHTTCCHHHHHHHHHHHHHTTC-EEC
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccc--cchhhhhHhhcCCCHHHHHHHHHHHHHCCC-eEE
Confidence 68999999998882 23334477888999999 996 32 111 2334444444433344444444442 232 211
Q ss_pred EeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccC-cccccCCCCCCCCCCCCcc-HHHHHHH----HhcCCCcEEEEe
Q 013784 200 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR-KALLNGISPAENRTIPPLK-YEYYYAL----LRDFPDLTFTLN 273 (436)
Q Consensus 200 KiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr-t~~~~G~~~~~~~~i~~~~-~~~v~~l----~~~~~~iPVIan 273 (436)
-+- .+.++. +.+.++|+|.|.+|.. |. +|+-+.. ..+...+ -+.+.++ .+-.+++.|+.-
T Consensus 168 ~~v------~~~eeA-----~amA~agpDiI~~h~glT~--gglIG~~-~avs~~~~~e~i~~i~~a~~~vnpdvivLc~ 233 (286)
T 2p10_A 168 PYV------FSPEDA-----VAMAKAGADILVCHMGLTT--GGAIGAR-SGKSMDDCVSLINECIEAARTIRDDIIILSH 233 (286)
T ss_dssp CEE------CSHHHH-----HHHHHHTCSEEEEECSCC------------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEE
T ss_pred Eec------CCHHHH-----HHHHHcCCCEEEECCCCCC--CCcccCC-CcccHHHhHHHHHHHHHHHHHhCCCcEEEec
Confidence 111 223332 2234689999999954 32 1221111 0111111 1223222 222367777655
Q ss_pred C-CCCCHHHHHHHHHc--CCCeeeehHHHHhCC
Q 013784 274 G-GINTVDEVNAALRK--GAHHVMVGRAAYQNP 303 (436)
Q Consensus 274 G-gI~s~~da~~~l~~--Gad~VmiGRa~l~~P 303 (436)
| +|.+++|++.+++. |++|+..++++..=|
T Consensus 234 gGpIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 234 GGPIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp STTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred CCCCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 5 99999999999996 899999999998877
No 139
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=97.99 E-value=7.3e-05 Score=76.42 Aligned_cols=146 Identities=9% Similarity=0.056 Sum_probs=107.7
Q ss_pred CCCcEEEE-EcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEE
Q 013784 123 EQHPIVLQ-IGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSV 199 (436)
Q Consensus 123 ~~~pi~vQ-L~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsv 199 (436)
+.-|+... +...+++.+++.|+.+.+.||+.+.|+.|+... + |+ ++++...+.+++||+++ ++++.+
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----d--g~---~~~~~die~v~avReavG~d~~L~v 235 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----D--GM---PGMRENLKRVEAVREVIGYDNDLML 235 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc-----c--cc---chHHHHHHHHHHHHHHcCCCCeEEE
Confidence 34455555 345689999999999999999999999987521 1 22 45678888999999987 578888
Q ss_pred EeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 200 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 200 KiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
...-+|+. ++..++ ++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.
T Consensus 236 DaN~~~~~----~~Ai~~-~~~Le~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~ 293 (412)
T 3stp_A 236 ECYMGWNL----DYAKRM-LPKLAPYEPRWLE----E------------PVIADDVAGYAELNAMN-IVPISGGEHEFSV 293 (412)
T ss_dssp ECTTCSCH----HHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHTC-SSCEEECTTCCSH
T ss_pred ECCCCCCH----HHHHHH-HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhCC-CCCEEeCCCCCCH
Confidence 87777753 344443 5567889998885 1 12223477777777764 8999999999999
Q ss_pred HHHHHHHHc-CCCeeeehHHHH
Q 013784 280 DEVNAALRK-GAHHVMVGRAAY 300 (436)
Q Consensus 280 ~da~~~l~~-Gad~VmiGRa~l 300 (436)
+++.++++. .+|.|++--+-.
T Consensus 294 ~~~~~li~~~a~D~v~ik~~~~ 315 (412)
T 3stp_A 294 IGCAELINRKAVSVLQYDTNRV 315 (412)
T ss_dssp HHHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHHHcCCCCEEecChhhc
Confidence 999999995 589988655444
No 140
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=97.99 E-value=0.00011 Score=75.60 Aligned_cols=142 Identities=13% Similarity=0.071 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc-ccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-LMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~-Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
.+++.+++.|+.+.+.||+.+.++.|+|.... +|.. ..++++...+++++||+++ +++|.+...-+|+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~-----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t---- 215 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR-----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFT---- 215 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT-----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc-----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC----
Confidence 68999999999888899999999999997532 1321 2235677889999999987 4777777666664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-C
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-G 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-G 289 (436)
.++..+ +++.+++.|+++|. . .+++.+++.+.++.+.. ++||++.+.+.+..++.++++. .
T Consensus 216 ~~~A~~-~~~~Le~~~i~~iE----e------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~g~ 277 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLWYE----E------------PVPPDNVGAMAQVARAV-RIPVATGERLTTKAEFAPVLREGA 277 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHS-SSCEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHhhhcCCCEEE----C------------CCChhhHHHHHHHHhcc-CCCEEecCCCCCHHHHHHHHHcCC
Confidence 334444 35667889998885 1 12233477777877765 8999999999999999999995 5
Q ss_pred CCeeeehHHHHhC
Q 013784 290 AHHVMVGRAAYQN 302 (436)
Q Consensus 290 ad~VmiGRa~l~~ 302 (436)
+|.|++--+-.+-
T Consensus 278 ~D~v~~d~~~~GG 290 (433)
T 3rcy_A 278 AAILQPALGRAGG 290 (433)
T ss_dssp CSEECCCHHHHTH
T ss_pred CCEEEeCchhcCC
Confidence 8999976655543
No 141
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=97.99 E-value=0.00011 Score=74.53 Aligned_cols=123 Identities=12% Similarity=0.111 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++.+.+.|+.+.+.||+.+.|+.|++ +++...+++++|++++ ++++.+...-+|+ .+
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~----~~ 224 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA----------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFN----LE 224 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS----------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC----HH
Confidence 799999999988889999999998752 3566778889998876 4778887776774 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC---
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG--- 289 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G--- 289 (436)
+..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++.|
T Consensus 225 ~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~~ 286 (392)
T 1tzz_A 225 TGIAY-AKMLRDYPLFWYE----E------------VGDPLDYALQAALAEFY-PGPMATGENLFSHQDARNLLRYGGMR 286 (392)
T ss_dssp HHHHH-HHHHTTSCCSEEE----C------------CSCTTCHHHHHHHTTTC-CSCEEECTTCCSHHHHHHHHHHSCCC
T ss_pred HHHHH-HHHHHHcCCCeec----C------------CCChhhHHHHHHHHhhC-CCCEEECCCCCCHHHHHHHHHcCCCc
Confidence 44454 4557889998875 1 11223477777776664 89999999999999999999855
Q ss_pred --CCeeee
Q 013784 290 --AHHVMV 295 (436)
Q Consensus 290 --ad~Vmi 295 (436)
+|.|++
T Consensus 287 ~~~d~v~i 294 (392)
T 1tzz_A 287 PDRDWLQF 294 (392)
T ss_dssp TTTCEECC
T ss_pred cCCcEEEE
Confidence 898885
No 142
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.98 E-value=4.7e-05 Score=71.67 Aligned_cols=145 Identities=20% Similarity=0.203 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccCCC-CCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVD-DHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G~~-~~~~~~ 212 (436)
..+.-+.-++.+.+.|+|.||+.. .+|..+..+.+.+.+-+.+|++.++ .|+-|-+-.+.- +..+.+
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVi-----------nig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~e 146 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVI-----------DVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEP 146 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-----------ehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHH
Confidence 445555556677788999999864 1355555678888888899988774 444333333321 001233
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCC-
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH- 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad- 291 (436)
++.. ..+++.++|+|+|-... |+++..+. ...+..++.+.+. .+++|-++|||++.+++.++++.||+
T Consensus 147 ei~~-a~~ia~~aGADfVKTST------Gf~~~~gA--t~edv~lm~~~v~--~~v~VKaaGGIrt~~~a~~~i~aGa~R 215 (231)
T 3ndo_A 147 LLAD-VCRVARDAGADFVKTST------GFHPSGGA--SVQAVEIMARTVG--ERLGVKASGGIRTAEQAAAMLDAGATR 215 (231)
T ss_dssp HHHH-HHHHHHHTTCSEEECCC------SCCTTCSC--CHHHHHHHHHHHT--TTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHH-HHHHHHHHCcCEEEcCC------CCCCCCCC--CHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHhcchh
Confidence 3333 45667789999997542 22100000 1112334444444 37999999999999999999999999
Q ss_pred -eeeehHHHHh
Q 013784 292 -HVMVGRAAYQ 301 (436)
Q Consensus 292 -~VmiGRa~l~ 301 (436)
|+-.|+.++.
T Consensus 216 iGtS~g~~I~~ 226 (231)
T 3ndo_A 216 LGLSGSRAVLD 226 (231)
T ss_dssp EEESSHHHHHH
T ss_pred cccchHHHHHh
Confidence 7777766653
No 143
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=97.97 E-value=0.00011 Score=74.54 Aligned_cols=124 Identities=11% Similarity=0.060 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
+++++.+.|+.+.+.||+.+.++.|. .+++...+++++|++++ ++++.+...-+|+ .+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~----~~ 234 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ----------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWD----RE 234 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC----------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSC----HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC----------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCC----HH
Confidence 89999999999999999999997652 34677889999999876 5788888777774 34
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCC
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAH 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad 291 (436)
+..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++. .+|
T Consensus 235 ~ai~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~d 296 (398)
T 2pp0_A 235 TAIRM-GRKMEQFNLIWIE----E------------PLDAYDIEGHAQLAAAL-DTPIATGEMLTSFREHEQLILGNASD 296 (398)
T ss_dssp HHHHH-HHHHGGGTCSCEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHHH-HHHHHHcCCceee----C------------CCChhhHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 44554 4457888998764 1 11223477777777765 8999999999999999999984 589
Q ss_pred eeeeh
Q 013784 292 HVMVG 296 (436)
Q Consensus 292 ~VmiG 296 (436)
.|++-
T Consensus 297 ~v~ik 301 (398)
T 2pp0_A 297 FVQPD 301 (398)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 98863
No 144
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=97.97 E-value=0.00011 Score=74.67 Aligned_cols=135 Identities=13% Similarity=0.050 Sum_probs=98.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecC------CCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCC
Q 013784 135 NLDNLAKATELANAYNYDEINLNC------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVD 206 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~------gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~ 206 (436)
+++++++.|+.+.+.||+.+.++. |+.... ...|....++++...+++++||+++ ++++.+...-+|+
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s----~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~ 227 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQ----NLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTD 227 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCS----CCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccC----cccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 899999999999999999999986 553110 1112112346678889999999976 4778887766664
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
.++..++ .+.+++.|+++|.- .+++.+++...++.+.. ++||++.+.+.+.+++++++
T Consensus 228 ----~~~a~~~-~~~l~~~~i~~iE~----------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i 285 (407)
T 2o56_A 228 ----TTSAIQF-GRMIEELGIFYYEE----------------PVMPLNPAQMKQVADKV-NIPLAAGERIYWRWGYRPFL 285 (407)
T ss_dssp ----HHHHHHH-HHHHGGGCCSCEEC----------------SSCSSSHHHHHHHHHHC-CSCEEECTTCCHHHHHHHHH
T ss_pred ----HHHHHHH-HHHHHhcCCCEEeC----------------CCChhhHHHHHHHHHhC-CCCEEeCCCcCCHHHHHHHH
Confidence 3445554 45678899987751 12233477777887775 89999999999999999999
Q ss_pred Hc-CCCeeee
Q 013784 287 RK-GAHHVMV 295 (436)
Q Consensus 287 ~~-Gad~Vmi 295 (436)
+. .+|.|++
T Consensus 286 ~~~~~d~v~i 295 (407)
T 2o56_A 286 ENGSLSVIQP 295 (407)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 85 4888874
No 145
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.96 E-value=0.00011 Score=69.25 Aligned_cols=53 Identities=19% Similarity=0.314 Sum_probs=46.5
Q ss_pred cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 254 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 254 ~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
..+++.++++...++||+.-|||.|+++++++++ |||+|.+|+++..+|.-++
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~~~~~~ 229 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKGIDAF 229 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHHCHHHH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhCHHHHH
Confidence 4788888877644899999999999999999999 9999999999999986543
No 146
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=97.96 E-value=0.00013 Score=73.67 Aligned_cols=124 Identities=8% Similarity=0.037 Sum_probs=94.3
Q ss_pred CCH---HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCC
Q 013784 134 SNL---DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDH 208 (436)
Q Consensus 134 ~~p---~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~ 208 (436)
.++ +.+++.|+.+.+.||+.+.++.|+ .+++...+++++||+++ ++++.+...-||+
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~-- 196 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG----------------TSFKEDVRHINALQHTAGSSITMILDANQSYD-- 196 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS----------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCC--
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC----------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCC--
Confidence 578 999999999989999999998765 23577888999999876 5788888777774
Q ss_pred CcHHHHHHHHHHHhhcC-CccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH
Q 013784 209 DSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 287 (436)
Q Consensus 209 ~~~~~~~~~la~~~e~~-Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~ 287 (436)
.++..++ .+.+++. |+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++
T Consensus 197 --~~~a~~~-~~~l~~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~ 256 (382)
T 2gdq_A 197 --AAAAFKW-ERYFSEWTNIGWLE----E------------PLPFDQPQDYAMLRSRL-SVPVAGGENMKGPAQYVPLLS 256 (382)
T ss_dssp --HHHHHTT-HHHHTTCSCEEEEE----C------------CSCSSCHHHHHHHHTTC-SSCEEECTTCCSHHHHHHHHH
T ss_pred --HHHHHHH-HHHHhhccCCeEEE----C------------CCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHH
Confidence 3344443 4456778 888764 1 11223477777777765 899999999999999999998
Q ss_pred c-CCCeeee
Q 013784 288 K-GAHHVMV 295 (436)
Q Consensus 288 ~-Gad~Vmi 295 (436)
. .+|.|++
T Consensus 257 ~~~~d~v~i 265 (382)
T 2gdq_A 257 QRCLDIIQP 265 (382)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
Confidence 4 5888875
No 147
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.96 E-value=9.9e-05 Score=70.50 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccCCCCCCcHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G~~~~~~~~~ 213 (436)
..+.-+.-++.+.+.|+|.||+.. .+|.....+.+.+.+-+.+|++.++ .|+-|-+-.+.- +.++
T Consensus 109 ~~~~Kv~Ea~~Ai~~GAdEIDmVi-----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---t~ee 174 (260)
T 3r12_A 109 ETRTKAHEAIFAVESGADEIDMVI-----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL---DTEE 174 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC-----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---CHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC---CHHH
Confidence 445555556667778999999863 1355555678888888888888764 555333444422 2234
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCC--
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH-- 291 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad-- 291 (436)
+.. ..+++.++|+|+|-.+ | |+++.. . ...+..++.+.+. .+++|-++|||.|.+++.++++.||+
T Consensus 175 i~~-A~~ia~eaGADfVKTS--T----Gf~~~G-A--T~edV~lm~~~vg--~~v~VKaAGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 175 KIA-ACVISKLAGAHFVKTS--T----GFGTGG-A--TAEDVHLMKWIVG--DEMGVKASGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp HHH-HHHHHHHTTCSEEECC--C----SSSSCC-C--CHHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHH-HHHHHHHhCcCEEEcC--C----CCCCCC-C--CHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 433 4566778999999865 2 221100 0 1112333444443 37999999999999999999999999
Q ss_pred eeeehHHHHh
Q 013784 292 HVMVGRAAYQ 301 (436)
Q Consensus 292 ~VmiGRa~l~ 301 (436)
|+-.|+.++.
T Consensus 243 GtS~g~~I~~ 252 (260)
T 3r12_A 243 GTSSGVKIVQ 252 (260)
T ss_dssp EESCHHHHHH
T ss_pred ecchHHHHHH
Confidence 6666666653
No 148
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.95 E-value=5.3e-05 Score=76.40 Aligned_cols=125 Identities=11% Similarity=0.048 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHH
Q 013784 136 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~ 213 (436)
++++++.++.+.+.||+.+.++.||+ | .+++.-.+.+++||+++ ++++.+...-+|++ .++
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~----------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d---~~~ 209 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVM----------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHT---CGH 209 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTT----------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCS---HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCC----------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHH
Confidence 48899999988888999999999875 2 24778888999999976 57888888888863 233
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCe
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHH 292 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~ 292 (436)
..+ +++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++ ..+|.
T Consensus 210 A~~-~~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~ 271 (374)
T 3sjn_A 210 SAM-MAKRLEEFNLNWIE----E------------PVLADSLISYEKLSRQV-SQKIAGGESLTTRYEFQEFITKSNADI 271 (374)
T ss_dssp HHH-HHHHSGGGCCSEEE----C------------SSCTTCHHHHHHHHHHC-SSEEEECTTCCHHHHHHHHHHHHCCSE
T ss_pred HHH-HHHHhhhcCceEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 333 35567888998885 1 11222477777777765 899999999999999999998 56898
Q ss_pred eee
Q 013784 293 VMV 295 (436)
Q Consensus 293 Vmi 295 (436)
|++
T Consensus 272 v~~ 274 (374)
T 3sjn_A 272 VQP 274 (374)
T ss_dssp ECC
T ss_pred EEe
Confidence 874
No 149
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.92 E-value=0.00019 Score=67.18 Aligned_cols=145 Identities=16% Similarity=0.261 Sum_probs=93.2
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+.+-|+.++|+.+. +.+.++|+|+|.+|.+.+. .+ +.++++.+++. |+.+.+-+..
T Consensus 64 ~~~~~v~lmv~d~~~~i---~~~~~agad~v~vH~~~~~---------------~~--~~~~~~~i~~~-g~~igv~~~p 122 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYV---EPLAKAGASGFTFHIEVSR---------------DN--WQELIQSIKAK-GMRPGVSLRP 122 (228)
T ss_dssp CSEEEEEEESSCGGGGH---HHHHHHTCSEEEEEGGGCT---------------TT--HHHHHHHHHHT-TCEEEEEECT
T ss_pred CCcEEEEEEecCHHHHH---HHHHHcCCCEEEECCCCcc---------------cH--HHHHHHHHHHc-CCCEEEEEeC
Confidence 56899999999997654 3444579999999964321 11 23455555443 6666655433
Q ss_pred CCCCCCcHHHHHHHHHHHhhcC--CccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLS--PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~--Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
... .+.+ ..+ .+. ++|+|.+..... |.++. ...+..++.+.++.+...++||++.|||.. +.
T Consensus 123 ~t~----~e~~----~~~-~~~~~~~d~vl~~sv~p---g~~g~---~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~n 186 (228)
T 1h1y_A 123 GTP----VEEV----FPL-VEAENPVELVLVMTVEP---GFGGQ---KFMPEMMEKVRALRKKYPSLDIEVDGGLGP-ST 186 (228)
T ss_dssp TSC----GGGG----HHH-HHSSSCCSEEEEESSCT---TCSSC---CCCGGGHHHHHHHHHHCTTSEEEEESSCST-TT
T ss_pred CCC----HHHH----HHH-HhcCCCCCEEEEEeecC---CCCcc---cCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HH
Confidence 221 1111 112 234 899998865543 22211 112233566666666544899999999976 89
Q ss_pred HHHHHHcCCCeeeehHHHHhCCcc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+.++++.|||+|.+|++++..|+.
T Consensus 187 i~~~~~aGaD~vvvGsai~~~~d~ 210 (228)
T 1h1y_A 187 IDVAASAGANCIVAGSSIFGAAEP 210 (228)
T ss_dssp HHHHHHHTCCEEEESHHHHTSSCH
T ss_pred HHHHHHcCCCEEEECHHHHCCCCH
Confidence 999999999999999999887763
No 150
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.89 E-value=0.00018 Score=69.13 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=84.0
Q ss_pred HHHHHHHCCCCEEEecC--CCCCCccccCCCccccccCChHHHHHHHHHHhhc---cCCcEEEEecc-CCCCC--CcHHH
Q 013784 142 ATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVSVKCRI-GVDDH--DSYNQ 213 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~--gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~---~~iPvsvKiR~-G~~~~--~~~~~ 213 (436)
.++.+.+.|+|.|++.. |. .+.+.+.+-+.++++. .++|+.+=..+ |.+.. .+.++
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~----------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~ 160 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGS----------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEI 160 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTS----------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHH
T ss_pred HHHHHHHCCCCEEEEEEecCC----------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHH
Confidence 45556778999999854 41 1223344444444432 37887665433 21111 13333
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC--CHHHHHHHH----H
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN--TVDEVNAAL----R 287 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~--s~~da~~~l----~ 287 (436)
+. ..+++..+.|+|+|-+. +. + ..+.+..+++....+||++.|||. +.+++.+++ +
T Consensus 161 i~-~a~~~a~~~GAD~vkt~--~~---~------------~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~ 222 (263)
T 1w8s_A 161 VA-YAARIALELGADAMKIK--YT---G------------DPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLE 222 (263)
T ss_dssp HH-HHHHHHHHHTCSEEEEE--CC---S------------SHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHcCCCEEEEc--CC---C------------CHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 33 23466778999999875 11 1 156666777666334999999999 999998888 6
Q ss_pred cCCCeeeehHHHHhCCcc
Q 013784 288 KGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 288 ~Gad~VmiGRa~l~~P~l 305 (436)
.||+|+.+||+++..|+.
T Consensus 223 aGA~GvsvgraI~~~~dp 240 (263)
T 1w8s_A 223 AGALGIAVGRNVWQRRDA 240 (263)
T ss_dssp TTCCEEEESHHHHTSTTH
T ss_pred cCCeEEEEehhhcCCcCH
Confidence 899999999999988874
No 151
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.88 E-value=1.9e-05 Score=75.61 Aligned_cols=51 Identities=18% Similarity=0.098 Sum_probs=42.8
Q ss_pred cHHHHHHHHhcCC----CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 254 KYEYYYALLRDFP----DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 254 ~~~~v~~l~~~~~----~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+++.+.++.+..+ ++|+|+.|||.+++|+.++++ |+|+|.||++++..++.
T Consensus 191 dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVGsAl~~~~d~ 245 (254)
T 1vc4_A 191 NLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIGTSLMRAPDL 245 (254)
T ss_dssp CTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEECHHHHTSSCH
T ss_pred CHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEeHHHcCCCCH
Confidence 3455555555443 689999999999999999999 99999999999999885
No 152
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=97.87 E-value=0.00026 Score=67.91 Aligned_cols=164 Identities=15% Similarity=0.094 Sum_probs=93.0
Q ss_pred EEEEEcCC--CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc----------CChHHHHHHHHHHhhcc-
Q 013784 127 IVLQIGGS--NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAANT- 193 (436)
Q Consensus 127 i~vQL~g~--~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll----------~~~~~l~eiv~av~~~~- 193 (436)
++.=|... +.+...+.++.+.+.|+|.|+|+. |...-. .| |-... -+.+.+.++++++++.+
T Consensus 19 ~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP~-ad--gp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 19 LVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF--PFSDPV-AD--GPTIQVAHEVALKNGIRFEDVLELSETLRKEFP 93 (262)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC--CCSCCT-TS--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred EEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC--CCCCcc-cc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC
Confidence 44444333 446788888999999999999964 331100 00 10000 24566778899999888
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc----------ccc-----------------------
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA----------LLN----------------------- 240 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~----------~~~----------------------- 240 (436)
++|+.+- ++.+.--...+.+++ +.+.++|+|.++++.-.. ...
T Consensus 94 ~~Pi~~m---~y~n~v~~~g~~~f~-~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~ 169 (262)
T 2ekc_A 94 DIPFLLM---TYYNPIFRIGLEKFC-RLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEA 169 (262)
T ss_dssp TSCEEEE---CCHHHHHHHCHHHHH-HHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHH
T ss_pred CCCEEEE---ecCcHHHHhhHHHHH-HHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHh
Confidence 8998772 211100000001222 223346666666543210 000
Q ss_pred -----------CCCCCCCCCCC-CccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 241 -----------GISPAENRTIP-PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 241 -----------G~~~~~~~~i~-~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
|..+.. .... +...+++.++.+.. ++||+..|||.+++++.+ +..|||+|.+|+++...
T Consensus 170 a~gfiy~vs~~g~TG~~-~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 170 ADEMTYFVSVTGTTGAR-EKLPYERIKKKVEEYRELC-DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKL 240 (262)
T ss_dssp CSSCEEEESSCC----------CHHHHHHHHHHHHHC-CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHH
T ss_pred CCCCEEEEecCCccCCC-CCcCcccHHHHHHHHHhhc-CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhh
Confidence 111111 0011 11135666666654 899999999999999999 77789999999999764
No 153
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.85 E-value=6.2e-05 Score=69.20 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=57.4
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
...|+..+.+++.+.. |... + ..+..+.++.+.. ++|||+.||+.+++++.++++.|||+|++|++++.+
T Consensus 140 ~~~~~~~vli~~~~~~--g~~~------g-~~~~~i~~~~~~~-~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~ 209 (237)
T 3cwo_X 140 EKRGAGEILLTSIDRD--GTKS------G-YDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 209 (237)
T ss_dssp HHHTCSEEEEEETTTT--TCCS------C-CCHHHHHHHGGGC-CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTT
T ss_pred hhcCCCeEEEEecCCC--Cccc------c-ccHHHHHHHHHhc-CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcC
Confidence 3467887888874221 2110 1 1266777776654 899999999999999999999999999999999999
Q ss_pred Ccchh
Q 013784 303 PWYTL 307 (436)
Q Consensus 303 P~lf~ 307 (436)
||.+.
T Consensus 210 ~~~~~ 214 (237)
T 3cwo_X 210 EIDVR 214 (237)
T ss_dssp SSCHH
T ss_pred CCCHH
Confidence 99853
No 154
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.85 E-value=0.00022 Score=66.68 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe--ccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC--RIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi--R~G~~~~~~~~ 212 (436)
..+....-++.+.+.|+|+||+..- +|.....+.+.+.+-+.+|++.++-+ .+|+ -.+.- +.+
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vin-----------ig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l---~~e 133 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVLH-----------LGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYF---SPE 133 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECC-----------HHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGS---CHH
T ss_pred chHHHHHHHHHHHHcCCCEEEeccc-----------chhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCC---CHH
Confidence 3455555667778899999998741 24433456778888888888876433 4453 22322 223
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCC-
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAH- 291 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad- 291 (436)
++. ...++..++|+|.|-..- |+++. + -.+.+.+.+.+.+. ..+||.++|||.+.+++.++++.||+
T Consensus 134 ~i~-~a~~ia~eaGADfVKTsT------Gf~~~-g--at~~dv~~m~~~vg--~~v~VkaaGGirt~~~al~~i~aGa~R 201 (220)
T 1ub3_A 134 EIA-RLAEAAIRGGADFLKTST------GFGPR-G--ASLEDVALLVRVAQ--GRAQVKAAGGIRDRETALRMLKAGASR 201 (220)
T ss_dssp HHH-HHHHHHHHHTCSEEECCC------SSSSC-C--CCHHHHHHHHHHHT--TSSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHH-HHHHHHHHhCCCEEEeCC------CCCCC-C--CCHHHHHHHHHhhC--CCCeEEEECCCCCHHHHHHHHHCCCcc
Confidence 333 346677789999998642 21100 0 01112344444442 37999999999999999999999999
Q ss_pred -eeeehHHHHh
Q 013784 292 -HVMVGRAAYQ 301 (436)
Q Consensus 292 -~VmiGRa~l~ 301 (436)
|+-.|+.++.
T Consensus 202 iG~S~g~~I~~ 212 (220)
T 1ub3_A 202 LGTSSGVALVA 212 (220)
T ss_dssp EEETTHHHHHC
T ss_pred cchhHHHHHHH
Confidence 8877777543
No 155
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=97.84 E-value=0.0002 Score=72.99 Aligned_cols=145 Identities=12% Similarity=0.071 Sum_probs=105.3
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+...+.+.+++.+++.++.+.+.||+.+.+ .|+|..... ....+++...+++++||+++ +++|.+.
T Consensus 113 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~-------~~~~~~~~d~e~v~avR~avG~d~~L~vD 184 (405)
T 3rr1_A 113 DKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII-------DTSRAVDAAVARVAEIRSAFGNTVEFGLD 184 (405)
T ss_dssp SCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB-------CSHHHHHHHHHHHHHHHHTTGGGSEEEEE
T ss_pred CceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc-------ccchhHHHHHHHHHHHHHHhCCCceEEEE
Confidence 4456777777889999999999888899999999 888753211 11134566788899999987 5778887
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
..-+|+ .++..+ +++.+++.|+++|. .. +++.+++...++.+.. ++||++.+.+.+.+
T Consensus 185 aN~~~~----~~~A~~-~~~~L~~~~i~~iE----eP------------~~~~d~~~~~~l~~~~-~iPIa~dE~i~~~~ 242 (405)
T 3rr1_A 185 FHGRVS----APMAKV-LIKELEPYRPLFIE----EP------------VLAEQAETYARLAAHT-HLPIAAGERMFSRF 242 (405)
T ss_dssp CCSCBC----HHHHHH-HHHHHGGGCCSCEE----CS------------SCCSSTHHHHHHHTTC-SSCEEECTTCCSHH
T ss_pred CCCCCC----HHHHHH-HHHHHHhcCCCEEE----CC------------CCcccHHHHHHHHhcC-CCCEEecCCcCCHH
Confidence 766665 334444 34567888998875 11 1222366667777664 89999999999999
Q ss_pred HHHHHHH-cCCCeeeehH
Q 013784 281 EVNAALR-KGAHHVMVGR 297 (436)
Q Consensus 281 da~~~l~-~Gad~VmiGR 297 (436)
++.++++ ..+|.|++--
T Consensus 243 ~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 243 DFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp HHHHHHHHCCCSEECCBT
T ss_pred HHHHHHHHhCCCeEEECh
Confidence 9999998 5589988643
No 156
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.83 E-value=1.6e-05 Score=76.03 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=59.8
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.+++.|++.|.++.......+. ...++.+.++.+.. ++||+++|||.+.+++.++++.|||+|.+|+.
T Consensus 36 a~~~~~~Ga~~i~v~d~~~~~~~~---------g~~~~~i~~i~~~~-~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~ 105 (266)
T 2w6r_A 36 VVEVEKRGAGEILLTSIDRDGTKS---------GYDTEMIRFVRPLT-TLPIIASGGAGKMEHFLEAFLAGADKALAASV 105 (266)
T ss_dssp HHHHHHHTCSEEEEEETTTSSCSS---------CCCHHHHHHHGGGC-CSCEEEESCCCSTHHHHHHHHHTCSEEECCCC
T ss_pred HHHHHHCCCCEEEEEecCcccCCC---------cccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHH
Confidence 345567999999997654311111 12378888887765 89999999999999999999999999999999
Q ss_pred HH-h--CCcchhh
Q 013784 299 AY-Q--NPWYTLG 308 (436)
Q Consensus 299 ~l-~--~P~lf~~ 308 (436)
++ . +|+.+.+
T Consensus 106 ~~~~~~~~~~~~~ 118 (266)
T 2w6r_A 106 FHFREIDMRELKE 118 (266)
T ss_dssp C------CHHHHH
T ss_pred HHhCCCCHHHHHH
Confidence 99 5 8887543
No 157
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.83 E-value=0.00049 Score=69.83 Aligned_cols=141 Identities=9% Similarity=0.069 Sum_probs=104.7
Q ss_pred CCCcEEEEEc---CCCHHHHHHHH-HHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCc
Q 013784 123 EQHPIVLQIG---GSNLDNLAKAT-ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVP 196 (436)
Q Consensus 123 ~~~pi~vQL~---g~~p~~~~~aA-~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iP 196 (436)
+.-|+...+. ..+++++++.+ +.+.+.||..+.+..|++... ...+++.-.+.+++||+++ +++
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~----------~~~~~~~d~~~v~avR~a~g~~~~ 193 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR----------CDVDIPGDIAKARAVRELLGPDAV 193 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC----------CSCCHHHHHHHHHHHHHHHCTTCC
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc----------cccCHHHHHHHHHHHHHHhCCCCe
Confidence 3446666652 36789998888 777777999999999987532 2257888889999999986 578
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCC
Q 013784 197 VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 276 (436)
Q Consensus 197 vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI 276 (436)
+.+...-+|+. ++..+ +++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+
T Consensus 194 l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~ 251 (393)
T 4dwd_A 194 IGFDANNGYSV----GGAIR-VGRALEDLGYSWFE----E------------PVQHYHVGAMGEVAQRL-DITVSAGEQT 251 (393)
T ss_dssp EEEECTTCCCH----HHHHH-HHHHHHHTTCSEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEBCTTC
T ss_pred EEEECCCCCCH----HHHHH-HHHHHHhhCCCEEE----C------------CCCcccHHHHHHHHhhC-CCCEEecCCc
Confidence 88888777753 33333 34566789998886 1 11222477777777765 8999999999
Q ss_pred CCHHHHHHHHHcCCCeeee
Q 013784 277 NTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~Vmi 295 (436)
.+.+++.++++.|+|.|++
T Consensus 252 ~~~~~~~~~i~~~~d~v~~ 270 (393)
T 4dwd_A 252 YTLQALKDLILSGVRMVQP 270 (393)
T ss_dssp CSHHHHHHHHHHTCCEECC
T ss_pred CCHHHHHHHHHcCCCEEEe
Confidence 9999999999855999885
No 158
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.80 E-value=0.00064 Score=67.50 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=97.0
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIG 204 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G 204 (436)
|+...+.+.+++.+.+.|+.+.+.||+.+.++.|+ +++...+++++||+.- ++++.+-..-+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-----------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 130 ETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE-----------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC-----------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 44445666789999999998889999999998664 3555677888888871 35565544445
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCcc--EEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTR--HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd--~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
|+ .++..++ .+.+++.|++ +|. . .+++.+++...++.+.. ++||++.+.+.+.+++
T Consensus 193 ~~----~~~a~~~-~~~l~~~~i~~~~iE----~------------P~~~~~~~~~~~l~~~~-~ipia~dE~~~~~~~~ 250 (345)
T 2zad_A 193 YT----QKEAVEF-ARAVYQKGIDIAVYE----Q------------PVRREDIEGLKFVRFHS-PFPVAADESARTKFDV 250 (345)
T ss_dssp SC----HHHHHHH-HHHHHHTTCCCSEEE----C------------CSCTTCHHHHHHHHHHS-SSCEEESTTCCSHHHH
T ss_pred CC----HHHHHHH-HHHHHhcCCCeeeee----C------------CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHH
Confidence 53 3454554 4557788998 764 1 12233477777777765 8999999999999999
Q ss_pred HHHHHc-CCCeeee--hHHHH
Q 013784 283 NAALRK-GAHHVMV--GRAAY 300 (436)
Q Consensus 283 ~~~l~~-Gad~Vmi--GRa~l 300 (436)
.++++. .+|.|++ ++|-+
T Consensus 251 ~~~i~~~~~d~v~ik~~~GGi 271 (345)
T 2zad_A 251 MRLVKEEAVDYVNIKLMKSGI 271 (345)
T ss_dssp HHHHHHTCCSEEEECHHHHHH
T ss_pred HHHHHhCCCCEEEEecccccH
Confidence 999984 5899998 55443
No 159
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.80 E-value=0.00015 Score=74.42 Aligned_cols=123 Identities=11% Similarity=0.038 Sum_probs=92.5
Q ss_pred CCH-HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 134 SNL-DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 134 ~~p-~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
.++ +.+++.|+.+.+.||+.+.++.|+ +++...+++++||+++ ++++.+...-+|+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~---- 241 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-----------------AARVDIERVRHVRKVLGDEVDILTDANTAYT---- 241 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCC----
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCC----
Confidence 578 999999998888899999998664 3567788999999876 5778777766664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHHHc-
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRK- 288 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~-iPVIanGgI~s~~da~~~l~~- 288 (436)
.++..++ .+.+++.|++.|. . .+++.+++...++.+.. + +||++.+.+.+.+++.++++.
T Consensus 242 ~~eai~~-~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~~iPIa~dE~~~~~~~~~~~i~~~ 303 (428)
T 3bjs_A 242 MADARRV-LPVLAEIQAGWLE----E------------PFACNDFASYREVAKIT-PLVPIAAGENHYTRFEFGQMLDAG 303 (428)
T ss_dssp HHHHHHH-HHHHHHTTCSCEE----C------------CSCTTCHHHHHHHTTTC-SSSCEEECTTCCSHHHHHHHHTTC
T ss_pred HHHHHHH-HHHHHhcCCCEEE----C------------CCCccCHHHHHHHHHhC-CCCcEEcCCCcCCHHHHHHHHHhC
Confidence 3444554 4557789998775 1 11223477777776654 7 999999999999999999985
Q ss_pred CCCeeee
Q 013784 289 GAHHVMV 295 (436)
Q Consensus 289 Gad~Vmi 295 (436)
.+|.|++
T Consensus 304 ~~d~v~i 310 (428)
T 3bjs_A 304 AVQVWQP 310 (428)
T ss_dssp CEEEECC
T ss_pred CCCEEEe
Confidence 4788775
No 160
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.76 E-value=0.0006 Score=64.07 Aligned_cols=155 Identities=17% Similarity=0.220 Sum_probs=100.2
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCC--EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc--cCCcEEEEe
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYD--EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNVPVSVKC 201 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d--~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~--~~iPvsvKi 201 (436)
.+...|...|...+.+..+.++++|.| .+|+--|.=+++. .+| .++++++++. .++|+.+++
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~----~~G----------~~~v~~ir~~~~~~~~~dvhL 71 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNI----TFG----------HPVVESLRKQLGQDPFFDMHM 71 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCB----CBC----------HHHHHHHHHHHCSSSCEEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccc----ccC----------HHHHHHHHHhhCCCCcEEEEE
Confidence 366778888888899999999999998 5555444322221 134 2466667766 478888876
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccc----------ccC------------------------------
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL----------LNG------------------------------ 241 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~----------~~G------------------------------ 241 (436)
-. .+.+.+ .+ . +.++|+|.|++|+-... ..|
T Consensus 72 mv--~~p~~~---i~---~-~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~ms 142 (228)
T 3ovp_A 72 MV--SKPEQW---VK---P-MAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMT 142 (228)
T ss_dssp EC--SCGGGG---HH---H-HHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEES
T ss_pred Ee--CCHHHH---HH---H-HHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEee
Confidence 64 332222 11 1 23489999999863100 001
Q ss_pred -CCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 242 -ISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 242 -~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
..+.......+..++.+.++++...+++|.+.||| +++.+.++.+.|||.+.+||+++..++
T Consensus 143 v~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a~d 205 (228)
T 3ovp_A 143 VEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRSED 205 (228)
T ss_dssp SCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTCSC
T ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 00011111112235556677666567999999999 589999999999999999999887765
No 161
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=97.76 E-value=0.00074 Score=67.43 Aligned_cols=138 Identities=5% Similarity=0.014 Sum_probs=100.7
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEecc
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~ 203 (436)
|....+...+++.+++.++.+.+.||..+.++.|++ ++.-.+.+++||+++ ++++.+...-
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~-----------------~~~d~~~v~avR~a~g~~~~l~vDan~ 192 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG-----------------IEADIARVKAIREAVGFDIKLRLDANQ 192 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC-----------------HHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC-----------------HHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 344556777899999888888888999999987753 234567788888876 5778888777
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+. ++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.
T Consensus 193 ~~~~----~~a~~~-~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 250 (354)
T 3jva_A 193 AWTP----KDAVKA-IQALADYQIELVE----Q------------PVKRRDLEGLKYVTSQV-NTTIMADESCFDAQDAL 250 (354)
T ss_dssp CSCH----HHHHHH-HHHTTTSCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEESTTCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHHhcCCCEEE----C------------CCChhhHHHHHHHHHhC-CCCEEEcCCcCCHHHHH
Confidence 7743 333443 4566778888875 1 11222477777777765 89999999999999999
Q ss_pred HHHH-cCCCeeeehHHHHhC
Q 013784 284 AALR-KGAHHVMVGRAAYQN 302 (436)
Q Consensus 284 ~~l~-~Gad~VmiGRa~l~~ 302 (436)
++++ ..+|.|++--.-.+-
T Consensus 251 ~~l~~~~~d~v~~k~~~~GG 270 (354)
T 3jva_A 251 ELVKKGTVDVINIKLMKCGG 270 (354)
T ss_dssp HHHHHTCCSEEEECHHHHTS
T ss_pred HHHHcCCCCEEEECchhcCC
Confidence 9998 568999976655443
No 162
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.76 E-value=0.00049 Score=67.38 Aligned_cols=200 Identities=10% Similarity=0.072 Sum_probs=118.9
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEecccc-chhhhhcccc-----hhhhhc----c-CCCCCcEEEEEc-C-CCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLA-AETIIYQQGN-----LDRFLA----F-SPEQHPIVLQIG-G-SNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~-~~~l~~~~~~-----~~~~~~----~-~~~~~pi~vQL~-g-~~p~~~~~a 142 (436)
|.+.-|....+++.+.| ...+++.-.+ +..+ +.+. .+.++. + ...+.|+++=+= | .+++...+.
T Consensus 33 ~~~ayD~~sA~l~e~aG-~dai~vs~~s~a~~~--G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~ 109 (305)
T 3ih1_A 33 IPGAHDAMAALVARNTG-FLALYLSGAAYTASK--GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVART 109 (305)
T ss_dssp EEBCSSHHHHHHHHHTT-CSCEEECHHHHHHHH--TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEECcHHHHHhC--CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHH
Confidence 44778888999988886 6666654321 1122 2221 111110 0 112467777662 2 358888899
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHh
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 222 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~ 222 (436)
++.+.++|+++|.|--+... +.+ |+.++.-+-..+...+-+++++++ +.++.|--|..-.....+++.++. ++.+
T Consensus 110 v~~l~~aGaagv~iED~~~~-krc--Gh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~R-a~ay 184 (305)
T 3ih1_A 110 AVEMVEAKVAAVQIEDQQLP-KKC--GHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIER-ANAY 184 (305)
T ss_dssp HHHHHHTTCSEEEEECBCSS-CCT--TCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHH-HHHH
T ss_pred HHHHHHhCCcEEEECCCCCC-ccc--CCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHH-HHHH
Confidence 99999999999999766432 222 233333334455555555666665 666666555421111124555554 4566
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe---CCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---GgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
+++|+|.|.+++... .+.+.++.+.+ ++|+++| ||-...-...++-+.|+..|.+|-.+
T Consensus 185 ~eAGAD~i~~e~~~~-----------------~~~~~~i~~~~-~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~ 246 (305)
T 3ih1_A 185 VKAGADAIFPEALQS-----------------EEEFRLFNSKV-NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTS 246 (305)
T ss_dssp HHHTCSEEEETTCCS-----------------HHHHHHHHHHS-CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHH
T ss_pred HHcCCCEEEEcCCCC-----------------HHHHHHHHHHc-CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHH
Confidence 789999999986421 46667777776 7999877 33211122445556899999988766
Q ss_pred Hh
Q 013784 300 YQ 301 (436)
Q Consensus 300 l~ 301 (436)
+.
T Consensus 247 ~r 248 (305)
T 3ih1_A 247 LR 248 (305)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 163
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.76 E-value=0.00024 Score=72.26 Aligned_cols=154 Identities=10% Similarity=0.056 Sum_probs=105.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccc------cCCCcccccc--CChHHHHHHHHHHhhcc-
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVA------GHGCFGVSLM--LDPKFVGEAMSVIAANT- 193 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~------r~g~yG~~Ll--~~~~~l~eiv~av~~~~- 193 (436)
+.-|+...+.+.+++.+++.++.+.+.||..+.+..|++..... .... |..+. +.++...+++++||+++
T Consensus 121 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~d~~~v~avR~a~G 199 (401)
T 3sbf_A 121 DAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTE-GSYYDQDQYMDNTLTMFKSLREKYG 199 (401)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCS-SEECCHHHHHHHHHHHHHHHHHHHT
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccc-cccccchHHHHHHHHHHHHHHHHcC
Confidence 34466666778899999999988888899999999987532110 0011 22211 12567788899999987
Q ss_pred -CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 194 -NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 194 -~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
++++.+...-+|+. ++..++ ++.+++.|+++|. .. +++.+++...++.+.. ++||++
T Consensus 200 ~d~~l~vDan~~~~~----~~A~~~-~~~L~~~~i~~iE----qP------------~~~~~~~~~~~l~~~~-~iPIa~ 257 (401)
T 3sbf_A 200 NQFHILHDVHERLFP----NQAIQF-AKEVEQYKPYFIE----DI------------LPPNQTEWLDNIRSQS-SVSLGL 257 (401)
T ss_dssp TSSEEEEECTTCSCH----HHHHHH-HHHHGGGCCSCEE----CS------------SCTTCGGGHHHHHTTC-CCCEEE
T ss_pred CCCEEEEECCCCCCH----HHHHHH-HHHHHhcCCCEEE----CC------------CChhHHHHHHHHHhhC-CCCEEe
Confidence 57888888777753 344443 4567788988875 11 1222355556666654 899999
Q ss_pred eCCCCCHHHHHHHHHc-CCCeeeehHHH
Q 013784 273 NGGINTVDEVNAALRK-GAHHVMVGRAA 299 (436)
Q Consensus 273 nGgI~s~~da~~~l~~-Gad~VmiGRa~ 299 (436)
.+.+.+.+++.++++. .+|.|++--+-
T Consensus 258 dE~~~~~~~~~~~i~~~~~d~v~~k~~~ 285 (401)
T 3sbf_A 258 GELFNNPEEWKSLIANRRIDFIRCHVSQ 285 (401)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCGGG
T ss_pred CCccCCHHHHHHHHhcCCCCEEecCccc
Confidence 9999999999999985 58988864433
No 164
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.75 E-value=5.1e-05 Score=70.57 Aligned_cols=74 Identities=9% Similarity=0.084 Sum_probs=54.8
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
.+.|+|+|.+..... +.+ .. ..++..|+.+.++.+.. ++||++.||| +++++.++++.||++|++|++++.+
T Consensus 127 ~~~gaD~i~~~~~f~---~~~-~~--g~~~~~~~~l~~~~~~~-~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 127 EKEDADYVLFGHVFE---TDC-KK--GLEGRGVSLLSDIKQRI-SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSGIFSS 198 (221)
T ss_dssp HHTTCSEEEEECCC----------------CHHHHHHHHHHHC-CSCEEEESSC-CGGGHHHHHHTTCSEEEESHHHHTS
T ss_pred HhCCCCEEEECCccc---cCC-CC--CCCCCCHHHHHHHHHhC-CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHHhhCC
Confidence 458999999865311 100 00 00234588888887765 8999999999 9999999999999999999999887
Q ss_pred Cc
Q 013784 303 PW 304 (436)
Q Consensus 303 P~ 304 (436)
++
T Consensus 199 ~d 200 (221)
T 1yad_A 199 AE 200 (221)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 165
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.73 E-value=0.00027 Score=68.23 Aligned_cols=163 Identities=15% Similarity=0.127 Sum_probs=90.1
Q ss_pred cEEEEEcCCCH--HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc----------CChHHHHHHHHHHhhcc
Q 013784 126 PIVLQIGGSNL--DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM----------LDPKFVGEAMSVIAANT 193 (436)
Q Consensus 126 pi~vQL~g~~p--~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll----------~~~~~l~eiv~av~~~~ 193 (436)
.++.=|...+| +...+.++.+.+. +|.|+|+. |...-.- | |-... -+.+.+.++++++++.+
T Consensus 17 ~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~--PfsdP~a-d--Gp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~ 90 (271)
T 1ujp_A 17 ALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGL--PYSDPLG-D--GPVIQRASELALRKGMSVQGALELVREVRALT 90 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEEC--CCCC-------CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred eEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECC--CCCCccc-c--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 35555555454 5666777777887 99999964 3311000 0 11111 35566778999999888
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCc-------------------------------c-----
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK-------------------------------A----- 237 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt-------------------------------~----- 237 (436)
++|+.+- ++.+.--.....+++. .+.++|+|.+++-.-+ .
T Consensus 91 ~~Pii~m---~y~n~v~~~g~~~f~~-~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~ 166 (271)
T 1ujp_A 91 EKPLFLM---TYLNPVLAWGPERFFG-LFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRH 166 (271)
T ss_dssp CSCEEEE---CCHHHHHHHCHHHHHH-HHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTT
T ss_pred CCCEEEE---ecCcHHHHhhHHHHHH-HHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHh
Confidence 8998772 2111000000112222 2233566655442110 0
Q ss_pred --------cccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 238 --------LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 238 --------~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
...|.++... .......+++.++++. .++||++.|||.+++++.++ .|||+|.+|+++...
T Consensus 167 ~~gfiy~vs~~G~TG~~~-~~~~~~~~~v~~vr~~-~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 167 ATGFVYAVSVTGVTGMRE-RLPEEVKDLVRRIKAR-TALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRA 235 (271)
T ss_dssp CCSCEEEECC-------------CCHHHHHHHHTT-CCSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHH
T ss_pred CCCCEEEEecCcccCCCC-CCCccHHHHHHHHHhh-cCCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhcc
Confidence 0001112111 1122225677777665 48999999999999999997 899999999998764
No 166
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.72 E-value=0.00014 Score=68.52 Aligned_cols=155 Identities=18% Similarity=0.248 Sum_probs=96.6
Q ss_pred EEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC--CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccC
Q 013784 127 IVLQIGGSNLDNLAKATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 127 i~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~--gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
++..|...|...+.+..+.+.+.|+|.+++.. |.-.+. . .+| .++++++++.++.|+.+-+-.
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~-~---~~g----------~~~v~~lr~~~~~~~~vhlmv- 71 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPN-I---TIG----------PLIVDAIRPLTKKTLDVHLMI- 71 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC-B---CBC----------HHHHHHHGGGCCSEEEEEEES-
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcc-h---hhh----------HHHHHHHHhhcCCcEEEEEEc-
Confidence 66777888888888999999999999866653 221111 0 112 377788888777787754443
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEEccC--ccc-----------cc---C---------------------------
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR--KAL-----------LN---G--------------------------- 241 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr--t~~-----------~~---G--------------------------- 241 (436)
.+.+.+.+ .+.++|+|.+++|.- ... .+ |
T Consensus 72 -~dp~~~i~-------~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv 143 (230)
T 1tqj_A 72 -VEPEKYVE-------DFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSV 143 (230)
T ss_dssp -SSGGGTHH-------HHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESS
T ss_pred -cCHHHHHH-------HHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEe
Confidence 22222211 223467888877765 100 00 0
Q ss_pred CCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 242 ISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 242 ~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
..+.......+..++.+.++.+.. .++||.+-|||.. +.+.++.+.|||+|.+|++++..++.
T Consensus 144 ~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 144 NPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAPNY 210 (230)
T ss_dssp CC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSSCH
T ss_pred ccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCCCH
Confidence 000011112233355565554432 2799999999987 99999999999999999999987773
No 167
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.71 E-value=0.00074 Score=68.18 Aligned_cols=134 Identities=14% Similarity=0.143 Sum_probs=98.1
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKi 201 (436)
-|+...+...+++.+++.++...+. ||..+.+..|++ +++.-.+.+++||+.+ ++++.+..
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 201 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG----------------DPAEDTRRVAELAREVGDRVSLRIDI 201 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS----------------CHHHHHHHHHHHHHTTTTTSEEEEEC
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC----------------CHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 3555567777898888777665554 999999987652 3455678889999987 47888888
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-+|+. ++..+ +.+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.++
T Consensus 202 n~~~~~----~~A~~-~~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 259 (383)
T 3i4k_A 202 NARWDR----RTALH-YLPILAEAGVELFE----Q------------PTPADDLETLREITRRT-NVSVMADESVWTPAE 259 (383)
T ss_dssp TTCSCH----HHHHH-HHHHHHHTTCCEEE----S------------CSCTTCHHHHHHHHHHH-CCEEEESTTCSSHHH
T ss_pred CCCCCH----HHHHH-HHHHHHhcCCCEEE----C------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHH
Confidence 888863 33333 34566789999886 1 11223467777777665 899999999999999
Q ss_pred HHHHHH-cCCCeeeeh
Q 013784 282 VNAALR-KGAHHVMVG 296 (436)
Q Consensus 282 a~~~l~-~Gad~VmiG 296 (436)
+.++++ ..+|.|++-
T Consensus 260 ~~~~i~~~~~d~v~~k 275 (383)
T 3i4k_A 260 ALAVVKAQAADVIALK 275 (383)
T ss_dssp HHHHHHHTCCSEEEEC
T ss_pred HHHHHHcCCCCEEEEc
Confidence 999998 458999864
No 168
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.70 E-value=0.0007 Score=63.12 Aligned_cols=143 Identities=15% Similarity=0.179 Sum_probs=88.4
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCC--CCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCG--CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~g--cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
+.|+.+-++-++++.+. +.+.++|+|+|.+|.. .+ .. ..++++.+++. ++.+.+-+
T Consensus 68 ~~~~~v~l~vnd~~~~v---~~~~~~Gad~v~vh~~~~~~---------------~~---~~~~~~~~~~~-g~~ig~~~ 125 (230)
T 1rpx_A 68 DLPLDVHLMIVEPDQRV---PDFIKAGADIVSVHCEQSST---------------IH---LHRTINQIKSL-GAKAGVVL 125 (230)
T ss_dssp CSCEEEEEESSSHHHHH---HHHHHTTCSEEEEECSTTTC---------------SC---HHHHHHHHHHT-TSEEEEEE
T ss_pred CCcEEEEEEecCHHHHH---HHHHHcCCCEEEEEecCccc---------------hh---HHHHHHHHHHc-CCcEEEEe
Confidence 56899999999987544 4446689999998854 22 11 23555555543 55555555
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCCCC
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGIN 277 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGgI~ 277 (436)
..+... + . . ..+ ..++|+|.+.+......|.. ..+..++.+.++.+.. .++||++.|||.
T Consensus 126 ~p~t~~-e---~-~---~~~--~~~~d~vl~~~~~pg~~g~~------~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~ 189 (230)
T 1rpx_A 126 NPGTPL-T---A-I---EYV--LDAVDLVLIMSVNPGFGGQS------FIESQVKKISDLRKICAERGLNPWIEVDGGVG 189 (230)
T ss_dssp CTTCCG-G---G-G---TTT--TTTCSEEEEESSCTTCSSCC------CCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred CCCCCH-H---H-H---HHH--HhhCCEEEEEEEcCCCCCcc------ccHHHHHHHHHHHHHHHhcCCCceEEEECCCC
Confidence 443211 1 1 1 111 25799986554443111211 1111234444444322 278999999997
Q ss_pred CHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 278 TVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 278 s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
++.+.++++.|||+|.+||++...++.
T Consensus 190 -~~n~~~~~~aGad~vvvgSaI~~a~dp 216 (230)
T 1rpx_A 190 -PKNAYKVIEAGANALVAGSAVFGAPDY 216 (230)
T ss_dssp -TTTHHHHHHHTCCEEEESHHHHTSSCH
T ss_pred -HHHHHHHHHcCCCEEEEChhhhCCCCH
Confidence 799988888999999999999987763
No 169
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.70 E-value=0.0003 Score=71.97 Aligned_cols=148 Identities=11% Similarity=0.091 Sum_probs=103.4
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccc--------------------cccCChHHH
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGV--------------------SLMLDPKFV 182 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~--------------------~Ll~~~~~l 182 (436)
+.-|+..-+.+.+++++++.++.+.+.||..+.+..|+|...+ .||. ...++++..
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~----~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d 206 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKD----AYGVGRGKLYYEPADASLPSVTGWDTRKALNYV 206 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC----------------------CCCCEEEECHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccc----cccccccccccccccccccccccccchhHHHHH
Confidence 3445555567789999999998888899999999999975322 1121 011125677
Q ss_pred HHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH
Q 013784 183 GEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 260 (436)
Q Consensus 183 ~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~ 260 (436)
.+++++||+++ ++++.+...-+|+. ++..+ +++.+++.|+++|. .. +++.+++...+
T Consensus 207 ~~~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE----qP------------~~~~d~~~~~~ 265 (418)
T 3r4e_A 207 PKLFEELRKTYGFDHHLLHDGHHRYTP----QEAAN-LGKMLEPYQLFWLE----DC------------TPAENQEAFRL 265 (418)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHH-HHHHHGGGCCSEEE----SC------------SCCSSGGGGHH
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCCCH----HHHHH-HHHHHHhhCCCEEE----CC------------CCccCHHHHHH
Confidence 88999999987 57888887777753 34444 34567889998885 11 11222444556
Q ss_pred HHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeeh
Q 013784 261 LLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVG 296 (436)
Q Consensus 261 l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiG 296 (436)
+.+.. ++||++.+.+.+.+++.++++. .+|.|++-
T Consensus 266 l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k 301 (418)
T 3r4e_A 266 VRQHT-VTPLAVGEIFNTIWDAKDLIQNQLIDYIRAT 301 (418)
T ss_dssp HHHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred HHhcC-CCCEEEcCCcCCHHHHHHHHHcCCCCeEecC
Confidence 66665 8999999999999999999995 48888854
No 170
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.69 E-value=0.00032 Score=71.42 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=98.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc-ccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-LMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~-Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
.+++.+++.|+.+.+.||+.+.++.|++... ..|.. ...+++...+++++||+++ ++++.+...-+|+
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~-----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~---- 220 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTI-----YDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFT---- 220 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-----TCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBC----
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcc-----cccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcC----
Confidence 5789999988888788999999999987531 11211 1123667788999999987 4778887776775
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-C
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-G 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-G 289 (436)
.++..+ +++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++. .
T Consensus 221 ~~~A~~-~~~~l~~~~i~~iE----e------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a 282 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWFE----E------------PIPPEKPEDMAEVARYT-SIPVATGERLCTKYEFSRVLETGA 282 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHHHHHHHHHHTC
T ss_pred HHHHHH-HHHHHhhcCCcEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHhCC
Confidence 334444 35567889998886 1 11222467777777765 8999999999999999999984 4
Q ss_pred CCeeeeh
Q 013784 290 AHHVMVG 296 (436)
Q Consensus 290 ad~VmiG 296 (436)
+|.|++-
T Consensus 283 ~d~v~~d 289 (404)
T 4e5t_A 283 ASILQMN 289 (404)
T ss_dssp CSEECCC
T ss_pred CCEEecC
Confidence 8888753
No 171
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=97.68 E-value=0.00053 Score=70.52 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=92.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
+.+++.+++.|+.+.+.||+.|.|+.|+ +++...+++++||+++ ++++.+...-+|+
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~---- 254 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA-----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWD---- 254 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCC----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC-----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC----
Confidence 3489999999999999999999998663 3566788899999876 4777776666664
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cC
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KG 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~G 289 (436)
.++..++ .+.+++.|+++|.- .+++.+++...++.+....+||++.+.+.+++++.++++ ..
T Consensus 255 ~~~a~~~-~~~l~~~~i~~iEq----------------P~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 317 (441)
T 2hxt_A 255 VGPAIDW-MRQLAEFDIAWIEE----------------PTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA 317 (441)
T ss_dssp HHHHHHH-HHTTGGGCCSCEEC----------------CSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC
T ss_pred HHHHHHH-HHHHHhcCCCeeeC----------------CCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 3444554 45577889887641 112223666667766542599999999999999999998 45
Q ss_pred CCeeee
Q 013784 290 AHHVMV 295 (436)
Q Consensus 290 ad~Vmi 295 (436)
+|.|++
T Consensus 318 ~d~v~i 323 (441)
T 2hxt_A 318 VDLIQI 323 (441)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 898885
No 172
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.64 E-value=0.00084 Score=65.52 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=118.8
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc-----hhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN-----LDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~-----~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|.....++.+.| ...+++.-.+......+.+. .+..+. ....+.|+++=+ +| +++...+.
T Consensus 26 ~~~a~D~~sA~l~e~aG-f~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~ 103 (298)
T 3eoo_A 26 VVGAITAYAAKMAEAVG-FKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIART 103 (298)
T ss_dssp EEECSSHHHHHHHHHHT-CSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHH
Confidence 44778888888888876 66666543221111111111 111110 112457887766 34 88888999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHh
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVS 222 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~ 222 (436)
++.+.++|+.+|.|--+... |.+++.. |..|....+.+..|..++....+.++.+--|..-.....+++.++. ++..
T Consensus 104 v~~l~~aGaagv~iEDq~~~-k~cGh~~-gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~R-a~ay 180 (298)
T 3eoo_A 104 IRSFIKAGVGAVHLEDQVGQ-KRCGHRP-GKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIER-AIAY 180 (298)
T ss_dssp HHHHHHTTCSEEEEECBCCC-CCTTCCC-CCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHhCCeEEEECCCCCC-cccCCCC-CCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHH-HHhh
Confidence 99999999999999755422 2222222 3345544455655555444444556666666522111124444444 3455
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe---CCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---GgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
.++|+|.|-+++.+. .+.+.++++.+ ++||++| ||-.-.-...++-+.|+..|.+|-.+
T Consensus 181 ~~AGAD~if~~~~~~-----------------~ee~~~~~~~~-~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~ 242 (298)
T 3eoo_A 181 VEAGADMIFPEAMKT-----------------LDDYRRFKEAV-KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGA 242 (298)
T ss_dssp HHTTCSEEEECCCCS-----------------HHHHHHHHHHH-CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHH
T ss_pred HhcCCCEEEeCCCCC-----------------HHHHHHHHHHc-CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHH
Confidence 679999999987531 56667777776 6899887 33211123445556899999988776
Q ss_pred Hh
Q 013784 300 YQ 301 (436)
Q Consensus 300 l~ 301 (436)
+.
T Consensus 243 ~r 244 (298)
T 3eoo_A 243 YR 244 (298)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 173
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.64 E-value=0.00025 Score=70.93 Aligned_cols=138 Identities=10% Similarity=0.057 Sum_probs=101.0
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEe
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKi 201 (436)
.-|+...+...+++.+++.++.+.+.||..+.++.|| +++.-.+.+++||+++ ++++.+..
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~-----------------~~~~d~~~v~avR~~~g~~~~l~vDa 191 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG-----------------DEEQDFERLRRLHETLAGRAVVRVDP 191 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS-----------------CHHHHHHHHHHHHHHHTTSSEEEEEC
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC-----------------CHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 3456677888899999998888888899999999875 2455667788888876 57888888
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-+|+. ++..++ .+.+++.|+++|. . - +++.+++...++.+.. ++||++.+.+.+.++
T Consensus 192 n~~~~~----~~a~~~-~~~l~~~~i~~iE----q----P--------~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~ 249 (356)
T 3ro6_B 192 NQSYDR----DGLLRL-DRLVQELGIEFIE----Q----P--------FPAGRTDWLRALPKAI-RRRIAADESLLGPAD 249 (356)
T ss_dssp TTCCCH----HHHHHH-HHHHHHTTCCCEE----C----C--------SCTTCHHHHHTSCHHH-HHTEEESTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHHHhcCCCEEE----C----C--------CCCCcHHHHHHHHhcC-CCCEEeCCcCCCHHH
Confidence 888863 233333 4566778998885 1 1 1222366665555543 799999999999999
Q ss_pred HHHHHH-c-CCCeeeehHHHH
Q 013784 282 VNAALR-K-GAHHVMVGRAAY 300 (436)
Q Consensus 282 a~~~l~-~-Gad~VmiGRa~l 300 (436)
+.++++ . .+|.|++--+-.
T Consensus 250 ~~~~~~~~~~~d~v~~k~~~~ 270 (356)
T 3ro6_B 250 AFALAAPPAACGIFNIKLMKC 270 (356)
T ss_dssp HHHHHSSSCSCSEEEECHHHH
T ss_pred HHHHHhcCCcCCEEEEccccc
Confidence 999998 4 699999765543
No 174
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.62 E-value=0.00093 Score=61.07 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=87.1
Q ss_pred CCcEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 124 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
+.|+++-+...| ++.++ +.+.++|+|+|-+|.+.. .+.+.++++.+++. +.++.+-+-
T Consensus 53 ~~~i~~~l~~~di~~~~~---~~a~~~Gad~v~vh~~~~-----------------~~~~~~~~~~~~~~-g~~~gv~~~ 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEA---DIAFKAGADLVTVLGSAD-----------------DSTIAGAVKAAQAH-NKGVVVDLI 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHH---HHHHHTTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEECT
T ss_pred CCeEEEEEEecCccHHHH---HHHHhCCCCEEEEeccCC-----------------hHHHHHHHHHHHHc-CCceEEEEe
Confidence 568888777677 77654 566778999998885422 12344555555442 555433111
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEE-ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v-hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
..++.++..+ .+++.|+|++.+ .+.+....|. .+.. +.++++... ++||++.|||. ++.
T Consensus 112 ----s~~~p~~~~~----~~~~~g~d~v~~~~~~~~~~~g~--------~~~~-~~i~~~~~~--~~pi~v~GGI~-~~~ 171 (207)
T 3ajx_A 112 ----GIEDKATRAQ----EVRALGAKFVEMHAGLDEQAKPG--------FDLN-GLLAAGEKA--RVPFSVAGGVK-VAT 171 (207)
T ss_dssp ----TCSSHHHHHH----HHHHTTCSEEEEECCHHHHTSTT--------CCTH-HHHHHHHHH--TSCEEEESSCC-GGG
T ss_pred ----cCCChHHHHH----HHHHhCCCEEEEEecccccccCC--------CchH-HHHHHhhCC--CCCEEEECCcC-HHH
Confidence 1122333222 223468999944 4554322232 1222 445555442 68999999997 788
Q ss_pred HHHHHHcCCCeeeehHHHHhCCc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+.++++.|||+|.+||+++..++
T Consensus 172 ~~~~~~aGad~vvvGsaI~~~~d 194 (207)
T 3ajx_A 172 IPAVQKAGAEVAVAGGAIYGAAD 194 (207)
T ss_dssp HHHHHHTTCSEEEESHHHHTSSS
T ss_pred HHHHHHcCCCEEEEeeeccCCCC
Confidence 99999999999999999988665
No 175
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.61 E-value=0.00018 Score=72.91 Aligned_cols=103 Identities=14% Similarity=0.193 Sum_probs=72.2
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHH
Q 013784 178 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
+++.+.++++.+++. ++|+.++++.. ...+. ++.++++|+|.+.+|++.... +... +...|+.
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~-----~~~e~----a~~~~~agad~i~i~~~~~~~-~~~~------~~~~~~~ 202 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQ-----NVREI----APIVIKAGADLLVIQGTLISA-EHVN------TGGEALN 202 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTT-----THHHH----HHHHHHTTCSEEEEECSSCCS-SCCC------C-----C
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCc-----cHHHH----HHHHHHCCCCEEEEeCCcccc-ccCC------CcccHHH
Confidence 788899999988876 88999988642 12222 233456899999999765211 1111 1112555
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
+..+++.. ++|||+ |||.+++++.++++.|||+|++|+|.
T Consensus 203 i~~l~~~~-~~pvi~-ggi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 203 LKEFIGSL-DVPVIA-GGVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp HHHHHHHC-SSCEEE-ECCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred HHHHHHhc-CCCEEE-CCcCCHHHHHHHHHcCCCEEEECCCc
Confidence 66777765 899999 99999999999999999999998743
No 176
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.60 E-value=0.00061 Score=69.52 Aligned_cols=137 Identities=11% Similarity=0.053 Sum_probs=98.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccc-cCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCC
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHD 209 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~L-l~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~ 209 (436)
..+++.+++.++.+.+.||+.+.++.|++... ..|... ..+++...+.+++||+++ ++++.+...-+|+
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~-----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~--- 213 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAGPYTA-----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMV--- 213 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSCCCBT-----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC---
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcc-----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCC---
Confidence 35899999988888788999999999987531 112111 123567788899999987 4678777666664
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-
Q 013784 210 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK- 288 (436)
Q Consensus 210 ~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~- 288 (436)
.++..+ +++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++.
T Consensus 214 -~~~A~~-~~~~L~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 274 (412)
T 4e4u_A 214 -PSSAIR-LAKRLEKYDPLWFE----E------------PVPPGQEEAIAQVAKHT-SIPIATGERLTTKYEFHKLLQAG 274 (412)
T ss_dssp -HHHHHH-HHHHHGGGCCSEEE----C------------CSCSSCHHHHHHHHHTC-SSCEEECTTCCHHHHHHHHHHTT
T ss_pred -HHHHHH-HHHHhhhcCCcEEE----C------------CCChhhHHHHHHHHhhC-CCCEEecCccCCHHHHHHHHHcC
Confidence 334444 35567888998876 1 11223477777777765 8999999999999999999995
Q ss_pred CCCeeeeh
Q 013784 289 GAHHVMVG 296 (436)
Q Consensus 289 Gad~VmiG 296 (436)
.+|.|++-
T Consensus 275 a~d~v~~d 282 (412)
T 4e4u_A 275 GASILQLN 282 (412)
T ss_dssp CCSEECCC
T ss_pred CCCEEEeC
Confidence 48888753
No 177
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.55 E-value=0.00063 Score=62.77 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=85.7
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+.+-++-++++.+. +.+.++|+|+|.+|.+.+ .. ..++++.+++. +..+.+-+..
T Consensus 61 ~~~~~v~l~v~d~~~~i---~~~~~~gad~v~vh~~~~---------------~~---~~~~~~~~~~~-g~~i~~~~~~ 118 (220)
T 2fli_A 61 KLVFDCHLMVVDPERYV---EAFAQAGADIMTIHTEST---------------RH---IHGALQKIKAA-GMKAGVVINP 118 (220)
T ss_dssp CSEEEEEEESSSGGGGH---HHHHHHTCSEEEEEGGGC---------------SC---HHHHHHHHHHT-TSEEEEEECT
T ss_pred CCCEEEEEeecCHHHHH---HHHHHcCCCEEEEccCcc---------------cc---HHHHHHHHHHc-CCcEEEEEcC
Confidence 56899999988886543 666778999999986432 12 23444555443 5555444422
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCCCCCH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTV 279 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGgI~s~ 279 (436)
.. ..+. . ..+ ..++|+|.+-+......|.. ..+..++.+..+.+.. .++||++.|||. +
T Consensus 119 ~t----~~e~-~---~~~--~~~~d~vl~~~~~~g~~g~~------~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~ 181 (220)
T 2fli_A 119 GT----PATA-L---EPL--LDLVDQVLIMTVNPGFGGQA------FIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-N 181 (220)
T ss_dssp TS----CGGG-G---GGG--TTTCSEEEEESSCTTCSSCC------CCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-T
T ss_pred CC----CHHH-H---HHH--HhhCCEEEEEEECCCCcccc------cCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-H
Confidence 21 1111 1 111 25689886544333112211 1111133343333221 268999999998 7
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+++.++++.|||+|.+||+++..++
T Consensus 182 ~~~~~~~~~Gad~vvvGsai~~~~d 206 (220)
T 2fli_A 182 KTIRACYEAGANVFVAGSYLFKASD 206 (220)
T ss_dssp TTHHHHHHHTCCEEEESHHHHTSSC
T ss_pred HHHHHHHHcCCCEEEEChHHhCCCC
Confidence 9999988899999999999988766
No 178
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.52 E-value=0.00013 Score=66.96 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=55.8
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
.+.|+|+|.+++.... +.. .. ..+..|+.+.++.+.. ++||++.|||. ++++.++++.|+|+|.+|++++..
T Consensus 125 ~~~g~d~i~~~~~~~~--~~~--~~--~~~~~~~~l~~l~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 196 (215)
T 1xi3_A 125 EKKGADYLGAGSVFPT--KTK--ED--ARVIGLEGLRKIVESV-KIPVVAIGGIN-KDNAREVLKTGVDGIAVISAVMGA 196 (215)
T ss_dssp HHHTCSEEEEECSSCC--------C--CCCCHHHHHHHHHHHC-SSCEEEESSCC-TTTHHHHHTTTCSEEEESHHHHTS
T ss_pred HhcCCCEEEEcCCccC--CCC--CC--CCCcCHHHHHHHHHhC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHHHhCC
Confidence 3579999998763210 100 00 1234588888887765 89999999998 999999999999999999999887
Q ss_pred Cc
Q 013784 303 PW 304 (436)
Q Consensus 303 P~ 304 (436)
|+
T Consensus 197 ~d 198 (215)
T 1xi3_A 197 ED 198 (215)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 179
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.50 E-value=8.7e-05 Score=71.49 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=46.3
Q ss_pred cHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC--Ccch
Q 013784 254 KYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN--PWYT 306 (436)
Q Consensus 254 ~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~--P~lf 306 (436)
..+.+.++++... ++||++-|||+|.++++++++.|||+|.+|++++.| |.++
T Consensus 213 ~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d~~Pelv 268 (286)
T 3vk5_A 213 PPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQPDWRSAL 268 (286)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSSTTHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcCCCHHHH
Confidence 3677777777643 799999999999999999999999999999999999 6554
No 180
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.49 E-value=0.00042 Score=65.07 Aligned_cols=75 Identities=21% Similarity=0.216 Sum_probs=58.8
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
.+...+-.|...|-+.+ + |.. .+.+.+.++++...++||+.-|||.|++++++++ .|||+|.+|+
T Consensus 145 ~a~~a~~~g~~~VYld~-s----G~~---------~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 145 YARVSELLQLPIFYLEY-S----GVL---------GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp HHHHHHHTTCSEEEEEC-T----TSC---------CCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred HHHHHHHcCCCEEEecC-C----CCc---------CCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 35555556788887765 2 211 1378888887764369999999999999999998 6999999999
Q ss_pred HHHhCCcchh
Q 013784 298 AAYQNPWYTL 307 (436)
Q Consensus 298 a~l~~P~lf~ 307 (436)
++..||.++.
T Consensus 210 a~v~~p~~~~ 219 (228)
T 3vzx_A 210 AVYEDFDRAL 219 (228)
T ss_dssp HHHHCHHHHH
T ss_pred HHhcCHHHHH
Confidence 9999999753
No 181
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=97.47 E-value=0.00068 Score=69.43 Aligned_cols=154 Identities=11% Similarity=0.050 Sum_probs=104.1
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCcc------ccCCCcccccc--CChHHHHHHHHHHhhcc--
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKV------AGHGCFGVSLM--LDPKFVGEAMSVIAANT-- 193 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v------~r~g~yG~~Ll--~~~~~l~eiv~av~~~~-- 193 (436)
.-|+..-+.+.+++.+++.++.+.+.||..+.+..|++.... .+... |..+. ...+...+++++||+++
T Consensus 143 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~e~v~avR~avG~ 221 (422)
T 3tji_A 143 AIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTP-GAWFDQQEYMSNTVEMFHALREKYGW 221 (422)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCS-SEECCHHHHHHHHHHHHHHHHHHHCS
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccc-cccccchhHHHHHHHHHHHHHHHcCC
Confidence 345555566788999999998888889999999998753110 00011 21110 11467778899999986
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
++++.+...-+|+. ++..++ ++.+++.|+++|. . .+++.+++...++.+.. ++||++.
T Consensus 222 d~~L~vDaN~~~~~----~~A~~~-~~~Le~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~d 279 (422)
T 3tji_A 222 KLHILHDVHERLFP----QQAVQL-AKQLEPFQPYFIE----D------------ILPPQQSAWLEQVRQQS-CVPLALG 279 (422)
T ss_dssp SSEEEEECTTCSCH----HHHHHH-HHHHGGGCCSEEE----C------------CSCGGGGGGHHHHHHHC-CCCEEEC
T ss_pred CCEEEEECCCCCCH----HHHHHH-HHHHHhhCCCeEE----C------------CCChhhHHHHHHHHhhC-CCCEEEe
Confidence 57888887777753 344443 4567788988875 1 11222355556676665 8999999
Q ss_pred CCCCCHHHHHHHHHc-CCCeeeehHHHH
Q 013784 274 GGINTVDEVNAALRK-GAHHVMVGRAAY 300 (436)
Q Consensus 274 GgI~s~~da~~~l~~-Gad~VmiGRa~l 300 (436)
+.+.+.+++.++++. .+|.|++--+-.
T Consensus 280 E~~~~~~~~~~ll~~ga~d~v~~k~~~~ 307 (422)
T 3tji_A 280 ELFNNPAEWHDLIVNRRIDFIRCHVSQI 307 (422)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCGGGG
T ss_pred CCcCCHHHHHHHHhcCCCCEEecCcccc
Confidence 999999999999985 589988644433
No 182
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.47 E-value=0.0024 Score=60.61 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=48.9
Q ss_pred CCCCCCC--ccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 246 ENRTIPP--LKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 246 ~~~~i~~--~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+|+.+.+ .+.+...++....+ ++.+|+-+||.+++|+.++.+.|+|+|.||.+++.+|+-
T Consensus 180 NNRnL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d~ 242 (258)
T 4a29_A 180 MSRDFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEK 242 (258)
T ss_dssp CSBCTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTTH
T ss_pred eCCCccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCcH
Confidence 3444433 34666677777665 688999999999999999999999999999999999973
No 183
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.46 E-value=0.0014 Score=62.35 Aligned_cols=153 Identities=14% Similarity=0.204 Sum_probs=99.4
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCC--EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEe
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYD--EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d--~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKi 201 (436)
..+...|.+.|...+.+..+.++++|+| .+|+=-|.=+++. .|| .++++++|+.+ ++|+.+.+
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni----t~G----------~~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL----TFG----------PMVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB----CCC----------HHHHHHHHHHTCCSCEEEEE
T ss_pred CeeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch----hcC----------HHHHHHHHHhCCCCeEEEEE
Confidence 3578888899998899999999999999 5555444322222 235 26677777777 89999877
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-----------ccc------------------------------
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-----------LLN------------------------------ 240 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-----------~~~------------------------------ 240 (436)
-. .+.+ ...+ .+.++|+|.|++|.-.. .++
T Consensus 94 mv--~~p~---~~i~----~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMs 164 (246)
T 3inp_A 94 MV--KPVD---ALIE----SFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMS 164 (246)
T ss_dssp EC--SSCH---HHHH----HHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEEC
T ss_pred ee--CCHH---HHHH----HHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEee
Confidence 64 3322 2222 22358999999985310 000
Q ss_pred ---CCCCCCCCCCCCccHHHHHHHHhc----CCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 241 ---GISPAENRTIPPLKYEYYYALLRD----FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 241 ---G~~~~~~~~i~~~~~~~v~~l~~~----~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
|.++ ...-+..++.+.++++. ..+++|.+-|||. .+.+.++.+.|||.+.+||+++..++
T Consensus 165 V~PGfgG---Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a~d 231 (246)
T 3inp_A 165 VNPGFGG---QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNSDS 231 (246)
T ss_dssp SCTTC-----CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTSSC
T ss_pred ecCCCCC---cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCCCC
Confidence 1111 11112224445444332 2368999999997 68999999999999999999887665
No 184
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=97.46 E-value=0.001 Score=66.50 Aligned_cols=128 Identities=13% Similarity=0.071 Sum_probs=90.6
Q ss_pred cEEEEEcC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 126 PIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 126 pi~vQL~g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
|...++.. .+++.+.+.|+.+.+.||+.+.++.+ | +...+++++|++.+ ++++.+...
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~-~------------------~~~~e~v~avr~~~g~~~~l~vDan 191 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE-P------------------GWDVEPVRAVRERFGDDVLLQVDAN 191 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB-T------------------TBSHHHHHHHHHHHCTTSEEEEECT
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC-c------------------hhHHHHHHHHHHhcCCCceEEEecc
Confidence 44445543 48999999999888899999999863 1 22346677777765 466766666
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-+|+.. + .++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++
T Consensus 192 ~~~~~~----~-~~~-~~~l~~~~i~~iE----~------------P~~~~~~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 248 (368)
T 1sjd_A 192 TAYTLG----D-APQ-LARLDPFGLLLIE----Q------------PLEEEDVLGHAELARRI-QTPICLDESIVSARAA 248 (368)
T ss_dssp TCCCGG----G-HHH-HHTTGGGCCSEEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHH
T ss_pred CCCCHH----H-HHH-HHHHHhcCCCeEe----C------------CCChhhHHHHHHHHHhC-CCCEEECCCcCCHHHH
Confidence 666532 3 333 4457888998765 1 12223477777777665 8999999999999999
Q ss_pred HHHHHc-CCCeeee
Q 013784 283 NAALRK-GAHHVMV 295 (436)
Q Consensus 283 ~~~l~~-Gad~Vmi 295 (436)
.++++. .+|.|++
T Consensus 249 ~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 249 ADAIKLGAVQIVNI 262 (368)
T ss_dssp HHHHHTTCCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 999984 5899986
No 185
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.42 E-value=0.0045 Score=60.00 Aligned_cols=197 Identities=10% Similarity=0.037 Sum_probs=118.6
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccc--cchhhhhccc---chhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv--~~~~l~~~~~---~~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|....+++.+.| ...+++.-. +...+.+.+- ..+.++. ....+.|+++=+ +| +++...+.
T Consensus 25 ~~~a~D~~sA~i~e~aG-f~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~~~~~ 102 (287)
T 3b8i_A 25 TASVFDPMSARIAADLG-FECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRT 102 (287)
T ss_dssp CEECCSHHHHHHHHHTT-CSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHH
Confidence 56888999999998886 666665533 2111221110 1111111 123567887766 45 88989999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cC--CcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TN--VPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~--iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
++.+.++|+++|.|--+... |-+ |+..+. +-..+...+-+++++++ .+ +-|..++-. . ...++++.+. +
T Consensus 103 v~~l~~aGa~gv~iED~~~p-Krc--gh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a--~~gl~~ai~R-a 174 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLP-AQF--GRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNA-E--LIDVDAVIQR-T 174 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCS-CCT--TTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-T--TSCHHHHHHH-H
T ss_pred HHHHHHhCCeEEEEcCCCCc-ccc--CCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechh-h--hcCHHHHHHH-H
Confidence 99888999999999866432 222 333334 55666566666666654 23 334444433 2 2235555554 5
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe-CCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-GGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan-GgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
+.++++|+|.|.+++... .+.+.++.+.+ ++|++.. ||-...-+..++-+.|+..|..|-.
T Consensus 175 ~ay~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~ 236 (287)
T 3b8i_A 175 LAYQEAGADGICLVGVRD-----------------FAHLEAIAEHL-HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHA 236 (287)
T ss_dssp HHHHHTTCSEEEEECCCS-----------------HHHHHHHHTTC-CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCH
T ss_pred HHHHHcCCCEEEecCCCC-----------------HHHHHHHHHhC-CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChH
Confidence 567789999999986321 45666777776 7898833 3322222344556689998888765
Q ss_pred HH
Q 013784 299 AY 300 (436)
Q Consensus 299 ~l 300 (436)
++
T Consensus 237 ~~ 238 (287)
T 3b8i_A 237 AY 238 (287)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 186
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.40 E-value=0.0041 Score=61.17 Aligned_cols=198 Identities=10% Similarity=-0.016 Sum_probs=117.4
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccc--cchhhhhccc---ch-------hhhhccCCCCCcEEEEE---cCCCHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQG---NL-------DRFLAFSPEQHPIVLQI---GGSNLDNLA 140 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv--~~~~l~~~~~---~~-------~~~~~~~~~~~pi~vQL---~g~~p~~~~ 140 (436)
|.++-|....+++.+.| ...+++.-. +...+.+.+- .. +.+.+.. .+.|+++=+ +| +++...
T Consensus 43 ~~~ayD~~sA~i~e~aG-fdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~-~~~PviaD~d~Gyg-~~~~v~ 119 (318)
T 1zlp_A 43 MPGVQDALSAAVVEKTG-FHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAA-PNLCVVVDGDTGGG-GPLNVQ 119 (318)
T ss_dssp EEEECSHHHHHHHHHTT-CSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHS-SSSEEEEECTTCSS-SHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhc-cCCCEEEeCCCCCC-CHHHHH
Confidence 55778888999988886 777776642 2111211110 01 1111111 157888776 45 888899
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
+.++.+.++|+.+|.|--+... +.. |+.|+.-+-..+...+-+++++++. +.++.|.-|..-.....++++++. +
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~-k~c--gH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~R-a 195 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWP-KKC--GHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRR-A 195 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSS-CCC--SSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHH-H
T ss_pred HHHHHHHHcCCcEEEECCCCCC-ccc--cCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHH-H
Confidence 9999888999999999766432 333 3334443334444444444554432 334444444411100113445544 4
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe---C---CCCCHHHHHHHHHcCCCee
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---G---GINTVDEVNAALRKGAHHV 293 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---G---gI~s~~da~~~l~~Gad~V 293 (436)
+.++++|+|.|.+++... .+.+.++.+.+ ++|+.+| | ...+ ..++-+.|...|
T Consensus 196 ~Ay~eAGAd~i~~e~~~~-----------------~e~~~~i~~~l-~~P~lan~~~~g~~~~~~---~~eL~~lGv~~v 254 (318)
T 1zlp_A 196 NLYKEAGADATFVEAPAN-----------------VDELKEVSAKT-KGLRIANMIEGGKTPLHT---PEEFKEMGFHLI 254 (318)
T ss_dssp HHHHHTTCSEEEECCCCS-----------------HHHHHHHHHHS-CSEEEEEECTTSSSCCCC---HHHHHHHTCCEE
T ss_pred HHHHHcCCCEEEEcCCCC-----------------HHHHHHHHHhc-CCCEEEEeccCCCCCCCC---HHHHHHcCCeEE
Confidence 567789999999986421 56667777776 7999776 3 3444 445556899999
Q ss_pred eehHHHHh
Q 013784 294 MVGRAAYQ 301 (436)
Q Consensus 294 miGRa~l~ 301 (436)
.+|-.++.
T Consensus 255 ~~~~~~~r 262 (318)
T 1zlp_A 255 AHSLTAVY 262 (318)
T ss_dssp EECSHHHH
T ss_pred EEchHHHH
Confidence 98877653
No 187
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.40 E-value=0.00014 Score=68.92 Aligned_cols=79 Identities=18% Similarity=0.311 Sum_probs=63.0
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++..++.|+|.+++---.+...|. +..++.+.++.+.. .+|+..-|||+|.++++++++.|||-|.+|+.
T Consensus 37 a~~~~~~gad~lhvvDld~a~~~~---------~~~~~~i~~i~~~~-~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~ 106 (243)
T 4gj1_A 37 FKEYEKAGAKELHLVDLTGAKDPS---------KRQFALIEKLAKEV-SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSM 106 (243)
T ss_dssp HHHHHHHTCCEEEEEEHHHHHCGG---------GCCHHHHHHHHHHC-CSEEEEESSCCCHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHCCCCEEEEEecCcccccc---------hhHHHHHHHHHHhc-CCCeEeccccccHHHHHHHHHcCCCEEEEccc
Confidence 445567899999986433322221 12378888888876 89999999999999999999999999999999
Q ss_pred HHhCCcchh
Q 013784 299 AYQNPWYTL 307 (436)
Q Consensus 299 ~l~~P~lf~ 307 (436)
++.||.++.
T Consensus 107 a~~~p~li~ 115 (243)
T 4gj1_A 107 AIKDATLCL 115 (243)
T ss_dssp TTTCHHHHH
T ss_pred cccCCchHH
Confidence 999999853
No 188
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=97.38 E-value=0.0033 Score=63.21 Aligned_cols=137 Identities=7% Similarity=0.075 Sum_probs=97.8
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
-|+...+...+++.+.+.++.+.+.||..+.+..|+. +++.-.+.+++||+++ ++++.+...
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 199 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK----------------PHAEELRILETMRGEFGERIDLRLDFN 199 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS----------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC----------------cHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 3555566666888887777766677999998887642 2344567788888875 578888888
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-+|+.. ++.++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+.+.+.+.+++
T Consensus 200 ~~~~~~-~A~~~----~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 257 (377)
T 3my9_A 200 QALTPF-GAMKI----LRDVDAFRPTFIE----Q------------PVPRRHLDAMAGFAAAL-DTPILADESCFDAVDL 257 (377)
T ss_dssp TCCCTT-THHHH----HHHHHTTCCSCEE----C------------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHH
T ss_pred CCcCHH-HHHHH----HHHHhhcCCCEEE----C------------CCCccCHHHHHHHHHhC-CCCEEECCccCCHHHH
Confidence 888753 33333 4456778988875 1 12223477777777765 8999999999999999
Q ss_pred HHHHH-cCCCeeeehHHH
Q 013784 283 NAALR-KGAHHVMVGRAA 299 (436)
Q Consensus 283 ~~~l~-~Gad~VmiGRa~ 299 (436)
.++++ ..+|.|++--+-
T Consensus 258 ~~~i~~~~~d~v~~k~~~ 275 (377)
T 3my9_A 258 MEVVRRQAADAISVKIMK 275 (377)
T ss_dssp HHHHHHTCCSEEECCHHH
T ss_pred HHHHHcCCCCEEEecccc
Confidence 99998 558998864433
No 189
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=97.38 E-value=0.0037 Score=62.78 Aligned_cols=123 Identities=13% Similarity=0.122 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcH
Q 013784 135 NLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~ 211 (436)
+++.+.+.++.+.+. ||..+.+..|++. ++.-.+.+++||+++ ++++.+...-+|+.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~----------------~~~d~~~v~avR~~~g~~~~l~vDan~~~~~---- 210 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDD----------------PNIDIARLTAVRERVDSAVRIAIDGNGKWDL---- 210 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSS----------------HHHHHHHHHHHHHHSCTTCEEEEECTTCCCH----
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCC----------------HHHHHHHHHHHHHHcCCCCcEEeeCCCCCCH----
Confidence 788888888777777 9999999887642 344567888898876 57788887777753
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GA 290 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Ga 290 (436)
++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++. .+
T Consensus 211 ~~a~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~~~ 272 (372)
T 3tj4_A 211 PTCQRF-CAAAKDLDIYWFE----E------------PLWYDDVTSHARLARNT-SIPIALGEQLYTVDAFRSFIDAGAV 272 (372)
T ss_dssp HHHHHH-HHHTTTSCEEEEE----S------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred HHHHHH-HHHHhhcCCCEEE----C------------CCCchhHHHHHHHHhhc-CCCEEeCCCccCHHHHHHHHHcCCC
Confidence 333343 4567778887775 1 11223477777777765 8999999999999999999985 47
Q ss_pred Ceeee
Q 013784 291 HHVMV 295 (436)
Q Consensus 291 d~Vmi 295 (436)
|.|++
T Consensus 273 d~v~~ 277 (372)
T 3tj4_A 273 AYVQP 277 (372)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 87774
No 190
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.38 E-value=0.0026 Score=63.84 Aligned_cols=132 Identities=10% Similarity=0.091 Sum_probs=93.1
Q ss_pred cEEEEEcCCCH-HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEec
Q 013784 126 PIVLQIGGSNL-DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCR 202 (436)
Q Consensus 126 pi~vQL~g~~p-~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR 202 (436)
|+..-+...++ +.+.++++.+++.||..+.+..|+. +++.-.+.+++||+.+ ++++.+...
T Consensus 133 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 133 PIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR----------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS----------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 44444544444 5566777777768999998877642 2344567788888877 378999988
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
.+|+.. ++ .+ +.+.+++.|+++|. . .+++.+++...++.+.. ++||.+.+.+.+.+++
T Consensus 197 ~~~~~~-~a---~~-~~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPia~dE~~~~~~~~ 254 (370)
T 1chr_A 197 QAWDEQ-VA---SV-YIPELEALGVELIE----Q------------PVGRENTQALRRLSDNN-RVAIMADESLSTLASA 254 (370)
T ss_dssp TCCCTT-HH---HH-HTHHHHTTTEEEEE----C------------CSCTTCHHHHHHHHHHS-CSEEEESSSCCSHHHH
T ss_pred CCCCHH-HH---HH-HHHHHHhcCCCEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHH
Confidence 888753 23 22 24566778888775 1 11233467777777765 8999999999999999
Q ss_pred HHHHH-cCCCeeee
Q 013784 283 NAALR-KGAHHVMV 295 (436)
Q Consensus 283 ~~~l~-~Gad~Vmi 295 (436)
.++++ ..+|.|++
T Consensus 255 ~~~~~~~~~d~v~~ 268 (370)
T 1chr_A 255 FDLARDRSVDVFSL 268 (370)
T ss_dssp HHHHTTTSCSEEEE
T ss_pred HHHHHcCCCCEEEE
Confidence 99998 45899885
No 191
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.37 E-value=0.00033 Score=66.49 Aligned_cols=76 Identities=16% Similarity=0.052 Sum_probs=55.4
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
.+.|+|+|.+...-.. .+ .. ..++..++.+.++.+.. .++||++-||| +++++.+++++|||+|.+|++++.
T Consensus 152 ~~~GaDyI~vgpvf~T---~t-K~--~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 152 AAGDADYFCVGPCWPT---PT-KP--GRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp HHSSCSEEEECCSSCC---CC--------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHT
T ss_pred hhCCCCEEEEcCccCC---CC-CC--CcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhC
Confidence 3589999999653211 00 11 11234578888877653 38999999999 899999999999999999999998
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
.++.
T Consensus 225 a~dp 228 (243)
T 3o63_A 225 ADDP 228 (243)
T ss_dssp CSSH
T ss_pred CCCH
Confidence 7764
No 192
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.37 E-value=0.0039 Score=59.31 Aligned_cols=138 Identities=18% Similarity=0.161 Sum_probs=97.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+-|+.-+=|.-++-+. .+ +..+|+|.|=|+..+ .+.+.+.++++..++ .|+.+.|-+
T Consensus 100 v~lPvLrKDfi~~~~qi---~e-a~~~GAD~ilLi~a~----------------l~~~~l~~l~~~a~~-lGl~~lvEv- 157 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQV---KL-ASSVGADAILIIARI----------------LTAEQIKEIYEAAEE-LGMDSLVEV- 157 (251)
T ss_dssp CCSCEEEECCCCSTHHH---HH-HHHTTCSEEEEEGGG----------------SCHHHHHHHHHHHHT-TTCEEEEEE-
T ss_pred CCCCEEEeeCCCCHHHH---HH-HHHcCCCEEEEeccc----------------CCHHHHHHHHHHHHH-cCCeEEEEe-
Confidence 46799999898777543 33 667899999998653 122457777777655 465554422
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcC-CccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVD 280 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~-Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~ 280 (436)
.+.+|+.. . .+. |+|.|-++.|.- .+. ..+++...++++..+ ++++|+-|||.+++
T Consensus 158 ------~~~eE~~~----A-~~l~g~~iIGinnr~l--~t~---------~~d~~~~~~l~~~ip~~~~vIaEsGI~t~e 215 (251)
T 1i4n_A 158 ------HSREDLEK----V-FSVIRPKIIGINTRDL--DTF---------EIKKNVLWELLPLVPDDTVVVAESGIKDPR 215 (251)
T ss_dssp ------CSHHHHHH----H-HTTCCCSEEEEECBCT--TTC---------CBCTTHHHHHGGGSCTTSEEEEESCCCCGG
T ss_pred ------CCHHHHHH----H-HhcCCCCEEEEeCccc--ccC---------CCCHHHHHHHHHhCCCCCEEEEeCCCCCHH
Confidence 34445432 2 357 999999998753 221 122455556666654 58999999999999
Q ss_pred HHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 281 EVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 281 da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
|+.++.+. +|+|.||++++..++.
T Consensus 216 dv~~~~~~-a~avLVG~aimr~~d~ 239 (251)
T 1i4n_A 216 ELKDLRGK-VNAVLVGTSIMKAENP 239 (251)
T ss_dssp GHHHHTTT-CSEEEECHHHHHCSSH
T ss_pred HHHHHHHh-CCEEEEcHHHcCCcCH
Confidence 99999999 9999999999998875
No 193
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.35 E-value=0.0024 Score=62.29 Aligned_cols=147 Identities=16% Similarity=0.195 Sum_probs=84.6
Q ss_pred CCcEEEEEcCCCH-------HHHHHHHHHHHHCCCCEEEec--CCCCCCccccCCCccccccCChHHHHHHHHHHhhccC
Q 013784 124 QHPIVLQIGGSNL-------DNLAKATELANAYNYDEINLN--CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 194 (436)
Q Consensus 124 ~~pi~vQL~g~~p-------~~~~~aA~~~~~~G~d~IdLN--~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~ 194 (436)
+.|+++.|.+++. +.+...++.+.+.|+|+|+++ .|.+. +. ...+.+.+++++..+ .+
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~--------~~----~~l~~i~~v~~~a~~-~G 171 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEY--------EH----QSIKNIIQLVDAGMK-VG 171 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTT--------HH----HHHHHHHHHHHHHHT-TT
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCc--------HH----HHHHHHHHHHHHHHH-cC
Confidence 5678888876541 112223455668899988875 33111 00 111223334433322 37
Q ss_pred CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 195 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 195 iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
+|+.+-...|.....+ .++....+++..+.|+|.|.+.- + + + .+ .++++.. .+||++.|
T Consensus 172 lpvIie~~~G~~~~~d-~e~i~~aariA~elGAD~VKt~~-t----~----e-------~~---~~vv~~~-~vPVv~~G 230 (295)
T 3glc_A 172 MPTMAVTGVGKDMVRD-QRYFSLATRIAAEMGAQIIKTYY-V----E----K-------GF---ERIVAGC-PVPIVIAG 230 (295)
T ss_dssp CCEEEEECC----CCS-HHHHHHHHHHHHHTTCSEEEEEC-C----T----T-------TH---HHHHHTC-SSCEEEEC
T ss_pred CEEEEECCCCCccCCC-HHHHHHHHHHHHHhCCCEEEeCC-C----H----H-------HH---HHHHHhC-CCcEEEEE
Confidence 8877644333222112 23333346677789999988641 1 1 0 13 3555554 79999999
Q ss_pred CCC-CHHHH----HHHHHcCCCeeeehHHHHhCCc
Q 013784 275 GIN-TVDEV----NAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 275 gI~-s~~da----~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
|+. +.+++ .++++.||+||.+||.++..|.
T Consensus 231 G~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 231 GKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp CSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 998 55444 4455689999999999997765
No 194
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.33 E-value=0.003 Score=63.32 Aligned_cols=131 Identities=6% Similarity=0.088 Sum_probs=95.0
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEecc
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~ 203 (436)
|....+...+++.+++.++.+.+.||..+.+..|+ +++.-.+.+++||+++ ++++.+...-
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~-----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~ 193 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG-----------------SKELDVERIRMIREAAGDSITLRIDANQ 193 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45566777899999988888888899999888764 2345567888888876 4677777666
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+. ++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+.+.+.+.+++.
T Consensus 194 ~~~~----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~ 251 (368)
T 3q45_A 194 GWSV----ETAIET-LTLLEPYNIQHCE----E------------PVSRNLYTALPKIRQAC-RIPIMADESCCNSFDAE 251 (368)
T ss_dssp CBCH----HHHHHH-HHHHGGGCCSCEE----C------------CBCGGGGGGHHHHHHTC-SSCEEESTTCCSHHHHH
T ss_pred CCCh----HHHHHH-HHHHhhcCCCEEE----C------------CCChhHHHHHHHHHhhC-CCCEEEcCCcCCHHHHH
Confidence 6653 343443 4566788988875 1 11222355556666654 89999999999999999
Q ss_pred HHHH-cCCCeeee
Q 013784 284 AALR-KGAHHVMV 295 (436)
Q Consensus 284 ~~l~-~Gad~Vmi 295 (436)
++++ ..+|.|++
T Consensus 252 ~~~~~~~~d~v~~ 264 (368)
T 3q45_A 252 RLIQIQACDSFNL 264 (368)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHcCCCCeEEe
Confidence 9998 45899885
No 195
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.31 E-value=0.00042 Score=64.24 Aligned_cols=76 Identities=16% Similarity=0.039 Sum_probs=53.6
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhC
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQN 302 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~ 302 (436)
.+.|+|+|.+..-... +.. . ....+..|+.+.++.+...++||++.|||. ++++.++++.|||+|.+|++++..
T Consensus 133 ~~~g~d~v~~~~v~~t--~~~--~-~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 133 EEDGADYVGLGPIYPT--ETK--K-DTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQA 206 (227)
T ss_dssp HHHTCSEEEECCSSCC--CSS--S-SCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTS
T ss_pred HhCCCCEEEECCCcCC--CCC--C-CCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcC
Confidence 3579999997321100 000 0 011233478888887765239999999998 999999999999999999999876
Q ss_pred Cc
Q 013784 303 PW 304 (436)
Q Consensus 303 P~ 304 (436)
++
T Consensus 207 ~d 208 (227)
T 2tps_A 207 ED 208 (227)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 196
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.31 E-value=0.0028 Score=64.91 Aligned_cols=148 Identities=13% Similarity=0.186 Sum_probs=102.0
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc------------cc--------CChHHHH
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS------------LM--------LDPKFVG 183 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~------------Ll--------~~~~~l~ 183 (436)
.-|+-.-+.+.+++++++.++.+.+.||..+-+..|.|.... .||.. .- .+.+...
T Consensus 138 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~----~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 138 RILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK----TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC----CTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred ceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccc----cccccccccccccccccccccccccchhHHHHHH
Confidence 345555566788999999998888889999999888653110 11110 00 1246778
Q ss_pred HHHHHHhhcc--CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 184 EAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 184 eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
+++++||+++ ++++.+...-+|+. ++..+ +++.+++.|+++|. .. +++.+++...++
T Consensus 214 e~v~avR~avG~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iE----qP------------~~~~d~~~~~~l 272 (424)
T 3v3w_A 214 DVFAAVRKEFGPDIHLLHDVHHRLTP----IEAAR-LGKALEPYHLFWME----DA------------VPAENQESFKLI 272 (424)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEE----CC------------SCCSSTTHHHHH
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCCH----HHHHH-HHHHHHhcCCCEEE----CC------------CChHhHHHHHHH
Confidence 8899999987 57788877767743 34444 34567889998885 11 112235555667
Q ss_pred HhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeehH
Q 013784 262 LRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGR 297 (436)
Q Consensus 262 ~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiGR 297 (436)
.+.. ++||++.+.+.+.+++.++++. .+|.|++--
T Consensus 273 ~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 273 RQHT-TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp HHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred HhhC-CCCEEEccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 6665 8999999999999999999995 488888643
No 197
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.29 E-value=0.0026 Score=59.96 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc---CCcEEEEeccCCCCCCcH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~---~iPvsvKiR~G~~~~~~~ 211 (436)
..+....-++.+.+.|+|+||+..- +|+... .+.+-+.+|++.+ +.|+-|-+-.+.- +.
T Consensus 86 ~~~~k~~e~~~Av~~GAdEID~vin-----------ig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---~~ 147 (234)
T 1n7k_A 86 PLEVKLVEAQTVLEAGATELDVVPH-----------LSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLW---DD 147 (234)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCC-----------GGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGS---CH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecc-----------chHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCC---CH
Confidence 4455555666777889999998641 232222 4555555565543 4676443333332 22
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH--HHhcCCCcEEEEeCCCCCHHHHHHHHHcC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA--LLRDFPDLTFTLNGGINTVDEVNAALRKG 289 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~--l~~~~~~iPVIanGgI~s~~da~~~l~~G 289 (436)
+++. ...++..++|+|+|-..- |.++.. ....+.+.. ..+.. .+||-++|||.+.+++.++++.|
T Consensus 148 e~i~-~a~ria~eaGADfVKTsT------G~~~~~-----gAt~~dv~l~~m~~~v-~v~VKaaGGirt~~~al~~i~aG 214 (234)
T 1n7k_A 148 KTLS-LLVDSSRRAGADIVKTST------GVYTKG-----GDPVTVFRLASLAKPL-GMGVKASGGIRSGIDAVLAVGAG 214 (234)
T ss_dssp HHHH-HHHHHHHHTTCSEEESCC------SSSCCC-----CSHHHHHHHHHHHGGG-TCEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHH-HHHHHHHHhCCCEEEeCC------CCCCCC-----CCCHHHHHHHHHHHHH-CCCEEEecCCCCHHHHHHHHHcC
Confidence 3333 346677789999998542 211100 011333333 44433 39999999999999999999999
Q ss_pred CC--eeeehHHHHh
Q 013784 290 AH--HVMVGRAAYQ 301 (436)
Q Consensus 290 ad--~VmiGRa~l~ 301 (436)
|+ |+-.|+.++.
T Consensus 215 a~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 215 ADIIGTSSAVKVLE 228 (234)
T ss_dssp CSEEEETTHHHHHH
T ss_pred ccccchHHHHHHHH
Confidence 99 8877777654
No 198
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.28 E-value=0.0052 Score=60.12 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=78.2
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec-cCC--CCCCcHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR-IGV--DDHDSYNQLCDFI 218 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR-~G~--~~~~~~~~~~~~l 218 (436)
.++.+.+.|+|+|.+..-... +. .. ....+.+.+++++.+ ..|+|+.+=+- .|. .+..+..+.....
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~------d~-~~--~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~a 182 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRS------DE-DA--QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDA 182 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECT------TS-CH--HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHH
T ss_pred hHHHHHHcCCCEEEEEEEcCC------Cc-cH--HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHH
Confidence 345567789999875421111 10 00 022233334444332 35888666542 222 2212221222333
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc----CCCcE-EEEeCCCCCHH----HHHHHHHcC
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD----FPDLT-FTLNGGINTVD----EVNAALRKG 289 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~----~~~iP-VIanGgI~s~~----da~~~l~~G 289 (436)
++.+.+.|+|.+-++.-.. +.+ .++.+.++++. . .+| |+..||+ +.+ .+..+++.|
T Consensus 183 a~~a~~lGaD~iKv~~~~~---~~g----------~~~~~~~vv~~~~~~~-~~P~Vv~aGG~-~~~~~~~~~~~a~~aG 247 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLY---GKG----------ARSDLLTASQRLNGHI-NMPWVILSSGV-DEKLFPRAVRVAMEAG 247 (304)
T ss_dssp HHHHTTSSCSEEEECCGGG---GCS----------CHHHHHHHHHHHHHTC-CSCEEECCTTS-CTTTHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEeCCCcC---CCC----------CHHHHHHHHHhccccC-CCCeEEEecCC-CHHHHHHHHHHHHHcC
Confidence 5566779999999875211 111 15555555554 4 799 9999999 553 466777799
Q ss_pred CCeeeehHHHHhC
Q 013784 290 AHHVMVGRAAYQN 302 (436)
Q Consensus 290 ad~VmiGRa~l~~ 302 (436)
++||.+||++...
T Consensus 248 a~Gv~vGRaI~q~ 260 (304)
T 1to3_A 248 ASGFLAGRAVWSS 260 (304)
T ss_dssp CCEEEESHHHHGG
T ss_pred CeEEEEehHHhCc
Confidence 9999999999877
No 199
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=97.28 E-value=0.0013 Score=66.67 Aligned_cols=124 Identities=13% Similarity=0.092 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
|.+++.+++.++.+.+.||+.+.++.|+ +++.-.+.+++||+++ ++++.+...-+|+.
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~-----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~--- 212 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF-----------------DDARDVRNALHVRELLGAATPLMADANQGWDL--- 212 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS-----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCH---
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC-----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCH---
Confidence 4457888888888888899999998764 3455678888888876 57888888878853
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCcc-HHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-c
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK-YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-K 288 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~-~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~ 288 (436)
++..+ +++.+++.|+++|. . .+++.+ ++...++.+.. ++||.+.+.+.+.+++.++++ .
T Consensus 213 -~~A~~-~~~~L~~~~i~~iE----e------------P~~~~d~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~ 273 (392)
T 3ddm_A 213 -PRARQ-MAQRLGPAQLDWLE----E------------PLRADRPAAEWAELAQAA-PMPLAGGENIAGVAAFETALAAR 273 (392)
T ss_dssp -HHHHH-HHHHHGGGCCSEEE----C------------CSCTTSCHHHHHHHHHHC-SSCEEECTTCCSHHHHHHHHHHT
T ss_pred -HHHHH-HHHHHHHhCCCEEE----C------------CCCccchHHHHHHHHHhc-CCCEEeCCCCCCHHHHHHHHHcC
Confidence 33333 35567888998886 1 122333 66667777765 899999999999999999998 4
Q ss_pred CCCeeee
Q 013784 289 GAHHVMV 295 (436)
Q Consensus 289 Gad~Vmi 295 (436)
.+|.|++
T Consensus 274 a~d~v~~ 280 (392)
T 3ddm_A 274 SLRVMQP 280 (392)
T ss_dssp CEEEECC
T ss_pred CCCEEEe
Confidence 5788875
No 200
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=97.28 E-value=0.0034 Score=63.53 Aligned_cols=140 Identities=9% Similarity=0.057 Sum_probs=102.1
Q ss_pred CCcEEEEEc----CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcE
Q 013784 124 QHPIVLQIG----GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPV 197 (436)
Q Consensus 124 ~~pi~vQL~----g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPv 197 (436)
.-|+...++ ..+++.+++.++.+.+.||+.+.++.|+ +++.-.+.+++||+++ ++++
T Consensus 127 ~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~-----------------~~~~d~~~v~avR~a~g~~~~l 189 (391)
T 3gd6_A 127 KIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK-----------------NLDADEEFLSRVKEEFGSRVRI 189 (391)
T ss_dssp EEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHHGGGCEE
T ss_pred eEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC-----------------CHHHHHHHHHHHHHHcCCCCcE
Confidence 345566676 6789999999988888899999998775 2344567788888876 4677
Q ss_pred E-EEeccCCCCCCcHHHHHHHHHHHhhcCCc--cEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 198 S-VKCRIGVDDHDSYNQLCDFIYKVSSLSPT--RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 198 s-vKiR~G~~~~~~~~~~~~~la~~~e~~Gv--d~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
. +...-+|+ .++..+ +++.+++.|+ ++|. . .+++.+++...++.+.. ++|| .+
T Consensus 190 ~~vDan~~~~----~~~A~~-~~~~l~~~~i~~~~iE----q------------P~~~~d~~~~~~l~~~~-~iPI--dE 245 (391)
T 3gd6_A 190 KSYDFSHLLN----WKDAHR-AIKRLTKYDLGLEMIE----S------------PAPRNDFDGLYQLRLKT-DYPI--SE 245 (391)
T ss_dssp EEEECTTCSC----HHHHHH-HHHHHTTCCSSCCEEE----C------------CSCTTCHHHHHHHHHHC-SSCE--EE
T ss_pred EEecCCCCcC----HHHHHH-HHHHHHhcCCCcceec----C------------CCChhhHHHHHHHHHHc-CCCc--CC
Confidence 7 77766774 334344 3556788898 7775 1 11222477777777765 8999 88
Q ss_pred CCCCHHHHHHHHH-cCCCeeeehHHHHhCCc
Q 013784 275 GINTVDEVNAALR-KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 275 gI~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 304 (436)
.+.+.+++.++++ ..+|.|++--+-.+-..
T Consensus 246 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit 276 (391)
T 3gd6_A 246 HVWSFKQQQEMIKKDAIDIFNISPVFIGGLT 276 (391)
T ss_dssp ECCCHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CCCCHHHHHHHHHcCCCCEEEECchhcCCHH
Confidence 9999999999998 55899998877766554
No 201
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=97.25 E-value=0.0049 Score=62.34 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=96.3
Q ss_pred CcEEEEEcC---CCHHHHHHHHHHHHHC---CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCc
Q 013784 125 HPIVLQIGG---SNLDNLAKATELANAY---NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVP 196 (436)
Q Consensus 125 ~pi~vQL~g---~~p~~~~~aA~~~~~~---G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iP 196 (436)
-|+...+.+ .+++.+++.++.+.+. ||..+.+..|.+ +++.-.+.+++||+++ +++
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~----------------~~~~d~~~v~avR~a~G~~~~ 221 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD----------------DPAVDIETAEAVWDAVGRDTA 221 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS----------------SHHHHHHHHHHHHHHHCTTSE
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCE
Confidence 344444455 6789888888877777 999998887643 3455567788888876 577
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCC
Q 013784 197 VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 276 (436)
Q Consensus 197 vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI 276 (436)
+.+...-+|+. ++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+...+
T Consensus 222 l~vDaN~~~~~----~~A~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~ 279 (390)
T 3ugv_A 222 LMVDFNQGLDM----AEAMHR-TRQIDDLGLEWIE----E------------PVVYDNFDGYAQLRHDL-KTPLMIGENF 279 (390)
T ss_dssp EEEECTTCCCH----HHHHHH-HHHHTTSCCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTC
T ss_pred EEEECCCCCCH----HHHHHH-HHHHHhhCCCEEE----C------------CCCcccHHHHHHHHHhc-CCCEEeCCCc
Confidence 88887777753 333343 4566788988875 1 12223477777777765 8999999999
Q ss_pred CCHHHHHHHHHc-CCCeeeehH
Q 013784 277 NTVDEVNAALRK-GAHHVMVGR 297 (436)
Q Consensus 277 ~s~~da~~~l~~-Gad~VmiGR 297 (436)
.+.+++.++++. .+|.|++--
T Consensus 280 ~~~~~~~~~i~~~a~d~v~ik~ 301 (390)
T 3ugv_A 280 YGPREMHQALQAGACDLVMPDF 301 (390)
T ss_dssp CSHHHHHHHHHTTCCSEECCBH
T ss_pred CCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999985 488887543
No 202
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.23 E-value=0.0069 Score=61.09 Aligned_cols=134 Identities=9% Similarity=0.012 Sum_probs=96.0
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
.-|+...+...+++.+++.++.+.+. ||..+.+..|++ +++.-.+.+++||+++ ++++.+.
T Consensus 156 ~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~----------------~~~~d~~~v~avR~a~G~~~~l~vD 219 (383)
T 3toy_A 156 PIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG----------------DLATDEAMIKGLRALLGPDIALMLD 219 (383)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 34555555557899998888877777 999998887643 3455567788888876 4678887
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
..-+|+. ++..++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+...+.+.+
T Consensus 220 aN~~~~~----~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 277 (383)
T 3toy_A 220 FNQSLDP----AEATRR-IARLADYDLTWIE----E------------PVPQENLSGHAAVRERS-EIPIQAGENWWFPR 277 (383)
T ss_dssp CTTCSCH----HHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCHHH
T ss_pred CCCCCCH----HHHHHH-HHHHHhhCCCEEE----C------------CCCcchHHHHHHHHhhc-CCCEEeCCCcCCHH
Confidence 7777753 333343 4566788988875 1 12223477777777765 89999999999999
Q ss_pred HHHHHHHc-CCCeeee
Q 013784 281 EVNAALRK-GAHHVMV 295 (436)
Q Consensus 281 da~~~l~~-Gad~Vmi 295 (436)
++.++++. .+|.|++
T Consensus 278 ~~~~~i~~~a~d~v~i 293 (383)
T 3toy_A 278 GFAEAIAAGASDFIMP 293 (383)
T ss_dssp HHHHHHHHTCCSEECC
T ss_pred HHHHHHHcCCCCEEEe
Confidence 99999984 4788763
No 203
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=97.23 E-value=0.012 Score=59.43 Aligned_cols=142 Identities=14% Similarity=0.124 Sum_probs=103.7
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
+.-|+...+...+++++++.++.+.+.||..+.+..||+.. . .+++.-.+.+++||+++ ++++.+.
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~------~------~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA------E------GGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT------T------THHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC------C------CCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 45678888888999999999888888999999999998742 1 24666778899999987 4678887
Q ss_pred eccCCCCCCcHHHHHHHHHHHh-hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~-e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
..-+|+. .+..++ .+.+ +..++ +|- . .++ +++...++.+.. ++||.+...+.+.
T Consensus 201 aN~~~~~----~~A~~~-~~~l~~~~~i-~iE-----e-----------P~~--~~~~~~~l~~~~-~iPIa~dE~~~~~ 255 (386)
T 3fv9_G 201 ANNGLTV----EHALRM-LSLLPPGLDI-VLE-----A-----------PCA--SWAETKSLRARC-ALPLLLDELIQTE 255 (386)
T ss_dssp CTTCCCH----HHHHHH-HHHSCSSCCC-EEE-----C-----------CCS--SHHHHHHHHTTC-CSCEEESTTCCSH
T ss_pred CCCCCCH----HHHHHH-HHHhhccCCc-EEe-----c-----------CCC--CHHHHHHHHhhC-CCCEEeCCCcCCH
Confidence 7777753 333333 4455 55555 443 1 111 367677777664 8999999999999
Q ss_pred HHHHHHHHc-CCCeeeehHHHHh
Q 013784 280 DEVNAALRK-GAHHVMVGRAAYQ 301 (436)
Q Consensus 280 ~da~~~l~~-Gad~VmiGRa~l~ 301 (436)
+++.++++. .+|.|++--+-.+
T Consensus 256 ~~~~~~~~~~a~d~v~~k~~~~G 278 (386)
T 3fv9_G 256 TDLIAAIRDDLCDGVGLKVSKQG 278 (386)
T ss_dssp HHHHHHHHTTCCSEEEEEHHHHT
T ss_pred HHHHHHHHhCCCCEEEECccccC
Confidence 999999984 5899987554433
No 204
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.23 E-value=0.0081 Score=60.56 Aligned_cols=138 Identities=15% Similarity=0.105 Sum_probs=96.6
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR 202 (436)
.-|+...+...+++.+.+.++.+.+.||..+.+..|+. +++.-.+.+++||+.+ ++++.+...
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~----------------~~~~d~~~v~avR~a~~~~~l~vDan 200 (385)
T 3i6e_A 137 TIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR----------------DHAFDIMRLELIARDFPEFRVRVDYN 200 (385)
T ss_dssp EEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 34566667667888877766666566999998887642 2344456677777765 577888888
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-+|+. +++.++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+...+.+.+++
T Consensus 201 ~~~~~-~~A~~~----~~~L~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 258 (385)
T 3i6e_A 201 QGLEI-DEAVPR----VLDVAQFQPDFIE----Q------------PVRAHHFELMARLRGLT-DVPLLADESVYGPEDM 258 (385)
T ss_dssp TCCCG-GGHHHH----HHHHHTTCCSCEE----C------------CSCTTCHHHHHHHHTTC-SSCEEESTTCCSHHHH
T ss_pred CCCCH-HHHHHH----HHHHHhcCCCEEE----C------------CCCcccHHHHHHHHHhC-CCCEEEeCCcCCHHHH
Confidence 88874 333332 4456778888875 1 12233477777777764 8999999999999999
Q ss_pred HHHHH-cCCCeeeehHHH
Q 013784 283 NAALR-KGAHHVMVGRAA 299 (436)
Q Consensus 283 ~~~l~-~Gad~VmiGRa~ 299 (436)
.++++ ..+|.|++--+-
T Consensus 259 ~~~~~~~~~d~v~~k~~~ 276 (385)
T 3i6e_A 259 VRAAHEGICDGVSIKIMK 276 (385)
T ss_dssp HHHHHHTCCSEEEECHHH
T ss_pred HHHHHcCCCCEEEecccc
Confidence 99998 558998865443
No 205
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.23 E-value=0.0027 Score=65.05 Aligned_cols=148 Identities=10% Similarity=0.047 Sum_probs=99.7
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc-----c------------c---CChHHHH
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-----L------------M---LDPKFVG 183 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~-----L------------l---~~~~~l~ 183 (436)
.-|+-.-+.+.+++.+++.++.+.+.||..+-+..|.|... ..||.. . . ...+...
T Consensus 139 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~----~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 214 (425)
T 3vcn_A 139 GVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLA----STYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVP 214 (425)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS----CCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCcccc----ccccccccccccCcccccccccccccchhHHHHHH
Confidence 34555556678899999999888889999999988864310 011110 0 0 0023456
Q ss_pred HHHHHHhhcc--CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 184 EAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 184 eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
+++++||+++ ++++.+...-+|+. ++..+ +++.+++.|+++|.- . +++.+++...++
T Consensus 215 e~v~avR~a~G~d~~l~vDaN~~~~~----~~A~~-~~~~L~~~~i~~iEq----P------------~~~~d~~~~~~l 273 (425)
T 3vcn_A 215 KLFERAREVLGWDVHLLHDVHHRLTP----IEAAR-LGKDLEPYRLFWLED----S------------VPAENQAGFRLI 273 (425)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCH----HHHHH-HHHHHGGGCCSEEEC----C------------SCCSSTTHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEECCCCCCH----HHHHH-HHHHHHhcCCCEEEC----C------------CChhhHHHHHHH
Confidence 7788888876 57788877666643 34444 355678899988861 1 112235555667
Q ss_pred HhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeehH
Q 013784 262 LRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGR 297 (436)
Q Consensus 262 ~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiGR 297 (436)
.+.. ++||++.+.+.+.+++.++++. .+|.|++--
T Consensus 274 ~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 274 RQHT-TTPLAVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp HHHC-CSCEEECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred HhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 6665 8999999999999999999995 488888643
No 206
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.21 E-value=0.0054 Score=61.41 Aligned_cols=135 Identities=9% Similarity=0.082 Sum_probs=95.5
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSV 199 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsv 199 (436)
+.-|+...+...+++.+++.++.+.+. ||..+.+..|... .+.-.+.+++||+++ ++++.+
T Consensus 127 ~~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~----------------~~~d~~~v~avR~a~g~~~~l~v 190 (367)
T 3dg3_A 127 DRMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRP----------------VQLDTAVVRALRERFGDAIELYV 190 (367)
T ss_dssp SEEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSS----------------THHHHHHHHHHHHHHGGGSEEEE
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCCh----------------hhhHHHHHHHHHHHhCCCCEEEE
Confidence 334566667778899998888777666 9999998876421 012356777888765 467888
Q ss_pred EeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 200 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 200 KiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
...-+|+. ++..+ +.+.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.
T Consensus 191 Dan~~~~~----~~a~~-~~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~ 248 (367)
T 3dg3_A 191 DGNRGWSA----AESLR-AMREMADLDLLFAE----E------------LCPADDVLSRRRLVGQL-DMPFIADESVPTP 248 (367)
T ss_dssp ECTTCSCH----HHHHH-HHHHTTTSCCSCEE----S------------CSCTTSHHHHHHHHHHC-SSCEEECTTCSSH
T ss_pred ECCCCCCH----HHHHH-HHHHHHHhCCCEEE----C------------CCCcccHHHHHHHHHhC-CCCEEecCCcCCH
Confidence 77777753 33333 35567888988875 1 11222366677777765 8999999999999
Q ss_pred HHHHHHHHc-CCCeeee
Q 013784 280 DEVNAALRK-GAHHVMV 295 (436)
Q Consensus 280 ~da~~~l~~-Gad~Vmi 295 (436)
+++.++++. .+|.|++
T Consensus 249 ~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 249 ADVTREVLGGSATAISI 265 (367)
T ss_dssp HHHHHHHHHTSCSEEEE
T ss_pred HHHHHHHHcCCCCEEEe
Confidence 999999984 5898886
No 207
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.19 E-value=0.00085 Score=63.93 Aligned_cols=167 Identities=15% Similarity=0.123 Sum_probs=91.5
Q ss_pred CCcEEEEEcCC--CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccc--------c--CChHHHHHHHHHHhh
Q 013784 124 QHPIVLQIGGS--NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSL--------M--LDPKFVGEAMSVIAA 191 (436)
Q Consensus 124 ~~pi~vQL~g~--~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~L--------l--~~~~~l~eiv~av~~ 191 (436)
..-++.=|... +.+...+.++.+.+.|+|.|||.+=...+.. | |-.. . -+.+.+.++++.+|+
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~a---D--GpvIq~a~~rAL~~g~~~~~~~~~~~~~r~ 87 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIA---D--GEIIADAAKIALDQGVDIHSVFELLARIKT 87 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCS---C--CCHHHHHHHHHHHTTCCHHHHHHHHHHCCC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCC---C--cHHHHHHHHHHHHCCCCHHHHHHHHHHHhc
Confidence 34455555444 4588888888889999999999864332211 1 1111 0 245677778887776
Q ss_pred ccCCcEEEEe------ccCCCC---------------C-CcHHHHHHHHHHHhhcCCccEEEEc-cCcc---------cc
Q 013784 192 NTNVPVSVKC------RIGVDD---------------H-DSYNQLCDFIYKVSSLSPTRHFIIH-SRKA---------LL 239 (436)
Q Consensus 192 ~~~iPvsvKi------R~G~~~---------------~-~~~~~~~~~la~~~e~~Gvd~I~vh-grt~---------~~ 239 (436)
. +|+.+-. +.|.+. . -..+|..+ +...+++.|++.|.+- ..+. .-
T Consensus 88 ~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~-~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a 164 (252)
T 3tha_A 88 K--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDD-LIKECERYNIALITLVSVTTPKERVKKLVKHA 164 (252)
T ss_dssp S--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHH-HHHHHHHTTCEECEEEETTSCHHHHHHHHTTC
T ss_pred C--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHH-HHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhC
Confidence 5 6865531 112110 0 00111111 1223344555544421 1110 00
Q ss_pred ---------cCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 240 ---------NGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 240 ---------~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
.|..+... .+...-.+++.++++. .++||+..+||.++++++++.+ +||+|.+|++++.
T Consensus 165 ~gFiY~Vs~~GvTG~~~-~~~~~~~~~v~~vr~~-~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 165 KGFIYLLASIGITGTKS-VEEAILQDKVKEIRSF-TNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVK 232 (252)
T ss_dssp CSCEEEECCSCSSSCSH-HHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHH
T ss_pred CCeEEEEecCCCCCccc-CCCHHHHHHHHHHHHh-cCCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHH
Confidence 02122110 0000012345555544 5899999999999999998876 6999999999974
No 208
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.18 E-value=0.00039 Score=65.83 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=47.5
Q ss_pred cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc-chhhhh
Q 013784 254 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW-YTLGHV 310 (436)
Q Consensus 254 ~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~-lf~~~~ 310 (436)
..+++.++++...++||+.-|||.|+++++++++ |||+|.+|+++..+|. ++ +++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~~~~-~~v 224 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFDRAL-KTV 224 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHHHHH-THH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHHHHH-HHH
Confidence 3788888877643899999999999999999999 9999999999999998 53 444
No 209
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.18 E-value=0.004 Score=63.33 Aligned_cols=138 Identities=9% Similarity=0.055 Sum_probs=95.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCc--cc------cccC---ChHHHHHHHHHHhhcc--CCcEEEE
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCF--GV------SLML---DPKFVGEAMSVIAANT--NVPVSVK 200 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~y--G~------~Ll~---~~~~l~eiv~av~~~~--~iPvsvK 200 (436)
.+++.+++.++.+.+.||+.+-+..+.+..... ..| |. .... ..+...+++++||+++ ++++.+.
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~--~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vD 219 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPL--HAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLD 219 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSC--EECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccc--cccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 368999999888888999999998733221100 001 11 0001 1456788999999986 5778887
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
..-+|+ .++..++ ++.+++.|+++|..- ..+++...++.+.. ++||++.+.+.+.+
T Consensus 220 aN~~~~----~~~A~~~-~~~L~~~~i~~iE~P------------------~~d~~~~~~l~~~~-~iPIa~dE~~~~~~ 275 (409)
T 3go2_A 220 LNFNAK----PEGYLKI-LRELADFDLFWVEID------------------SYSPQGLAYVRNHS-PHPISSCETLFGIR 275 (409)
T ss_dssp CTTCSC----HHHHHHH-HHHTTTSCCSEEECC------------------CSCHHHHHHHHHTC-SSCEEECTTCCHHH
T ss_pred CCCCCC----HHHHHHH-HHHHhhcCCeEEEeC------------------cCCHHHHHHHHhhC-CCCEEeCCCcCCHH
Confidence 777774 3344443 556788999998721 11366677777765 89999999999999
Q ss_pred HHHHHHHc-CCCeeeehH
Q 013784 281 EVNAALRK-GAHHVMVGR 297 (436)
Q Consensus 281 da~~~l~~-Gad~VmiGR 297 (436)
++.++++. .+|.|++=-
T Consensus 276 ~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 276 EFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp HHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHhCCCCEEEeCC
Confidence 99999995 489988644
No 210
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.18 E-value=0.013 Score=60.30 Aligned_cols=154 Identities=8% Similarity=0.053 Sum_probs=102.6
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCc-----------cccCCC---c---------cccc--cC
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----------VAGHGC---F---------GVSL--ML 177 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~-----------v~r~g~---y---------G~~L--l~ 177 (436)
+.-|+..-+.+.+++++++.++.+.+.||..+-+..|-.... +. .+. + |... ..
T Consensus 143 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (440)
T 3t6c_A 143 DGIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMV-KAKNIQPKRSPRTKAPGIYFDPEA 221 (440)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBC-CCSSCCCCCCCSSCCSSEECCHHH
T ss_pred CeeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccc-cccccccccccccccccccccchh
Confidence 344555556788999999988888888999999988743200 00 000 0 0000 00
Q ss_pred ChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccH
Q 013784 178 DPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 255 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~ 255 (436)
..+...+.+++||+++ ++++.+...-+|+. .+..++ ++.+++.|+++|. . .+++.++
T Consensus 222 ~~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~----~~A~~~-~~~L~~~~i~~iE----e------------P~~~~d~ 280 (440)
T 3t6c_A 222 YAKSIPRLFDHLRNKLGFSVELLHDAHERITP----INAIHM-AKALEPYQLFFLE----D------------PVAPENT 280 (440)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCSCH----HHHHHH-HHHTGGGCCSEEE----C------------SSCGGGG
T ss_pred hHHHHHHHHHHHHHhcCCCCeEEEECCCCCCH----HHHHHH-HHHhhhcCCCEEE----C------------CCChhhH
Confidence 1456778899999987 57888888878753 333443 4567788988885 1 1122235
Q ss_pred HHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeehHHH
Q 013784 256 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAA 299 (436)
Q Consensus 256 ~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiGRa~ 299 (436)
+...++.+.. ++||.+.+.+.+.+++.++++. .+|.|++--+-
T Consensus 281 ~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 324 (440)
T 3t6c_A 281 EWLKMLRQQS-STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISS 324 (440)
T ss_dssp GGHHHHHHHC-CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGG
T ss_pred HHHHHHHhhc-CCCEEeCcccCCHHHHHHHHHcCCccceeechhh
Confidence 5556676665 8999999999999999999985 58988865443
No 211
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.16 E-value=0.0051 Score=62.21 Aligned_cols=124 Identities=9% Similarity=-0.041 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHCCCCEEEec-CCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHH
Q 013784 138 NLAKATELANAYNYDEINLN-CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 138 ~~~~aA~~~~~~G~d~IdLN-~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~ 214 (436)
.+++.++.+.+.||..+-++ .|.+ . .+++.-.+++++||+++ ++++.+...-||.+ .++.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~--------~------~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~---~~~A 217 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND--------K------VSDKEIVAYLRELREVIGWDMDMMVDCLYRWTD---WQKA 217 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT--------T------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSC---HHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC--------c------cCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCC---HHHH
Confidence 56667777778899999884 2211 0 35677788899999876 57888887777732 2333
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCee
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHV 293 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~V 293 (436)
.+ +++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++ ..+|.|
T Consensus 218 ~~-~~~~L~~~~i~~iE----e------------P~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 279 (394)
T 3mqt_A 218 RW-TFRQLEDIDLYFIE----A------------CLQHDDLIGHQKLAAAI-NTRLCGAEMSTTRFEAQEWLEKTGISVV 279 (394)
T ss_dssp HH-HHHHTGGGCCSEEE----S------------CSCTTCHHHHHHHHHHS-SSEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred HH-HHHHHhhcCCeEEE----C------------CCCcccHHHHHHHHhhC-CCCEEeCCCcCCHHHHHHHHHcCCCCeE
Confidence 44 35567889999885 1 11222467777777765 899999999999999999998 468998
Q ss_pred eeh
Q 013784 294 MVG 296 (436)
Q Consensus 294 miG 296 (436)
++-
T Consensus 280 ~~k 282 (394)
T 3mqt_A 280 QSD 282 (394)
T ss_dssp CCC
T ss_pred ecC
Confidence 853
No 212
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=97.15 E-value=0.0026 Score=63.76 Aligned_cols=128 Identities=9% Similarity=0.076 Sum_probs=88.9
Q ss_pred cEEEEEcC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 126 PIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
|....+.. .+++++.+.++.+.+.||+.+.++.+ | . .+. +.+++||+++ ++++.+...-
T Consensus 138 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~--------~------~d~----~~v~avr~a~~~~~l~vDan~ 198 (375)
T 1r0m_A 138 EVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK-P--------G------WDV----QPVRATREAFPDIRLTVDANS 198 (375)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T--------T------BSH----HHHHHHHHHCTTSCEEEECTT
T ss_pred eeeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC-h--------H------HHH----HHHHHHHHHcCCCeEEEeCCC
Confidence 33344443 48999999988888899999999863 1 1 233 4455555544 6778888777
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+.. + .++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+.+.+.+.+++.
T Consensus 199 ~~~~~----~-~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 255 (375)
T 1r0m_A 199 AYTLA----D-AGR-LRQLDEYDLTYIE----Q------------PLAWDDLVDHAELARRI-RTPLCLDESVASASDAR 255 (375)
T ss_dssp CCCGG----G-HHH-HHTTGGGCCSCEE----C------------CSCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHH
T ss_pred CCCHH----H-HHH-HHHHHhCCCcEEE----C------------CCCcccHHHHHHHHHhC-CCCEEecCccCCHHHHH
Confidence 77642 2 333 3456778888875 1 11222366666777665 89999999999999999
Q ss_pred HHHH-cCCCeeee
Q 013784 284 AALR-KGAHHVMV 295 (436)
Q Consensus 284 ~~l~-~Gad~Vmi 295 (436)
++++ ..+|.|++
T Consensus 256 ~~i~~~~~d~v~i 268 (375)
T 1r0m_A 256 KALALGAGGVINL 268 (375)
T ss_dssp HHHHHTSCSEEEE
T ss_pred HHHHhCCCCEEEE
Confidence 9998 45899986
No 213
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.15 E-value=0.0039 Score=63.87 Aligned_cols=147 Identities=9% Similarity=0.092 Sum_probs=96.4
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc----c------------------cCChH
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS----L------------------MLDPK 180 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~----L------------------l~~~~ 180 (436)
+.-|+-....+.+++++.+.++...+.||+.+-+..|.|.... .||.. + ....+
T Consensus 137 ~~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (426)
T 4e4f_A 137 TGVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMET----TYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLD 212 (426)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-----------------------CCSEESSSCCEEEECHHHHHH
T ss_pred CceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCcccc----ccccccccccccccccccccccccccchhHHHH
Confidence 3345666677888988887777777789999999998764210 01100 0 01135
Q ss_pred HHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHH
Q 013784 181 FVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 258 (436)
Q Consensus 181 ~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v 258 (436)
+..+++++||+++ ++++.+...-+|+ .++..+ +++.+++.|+++|.- . +++.+++..
T Consensus 213 ~~~e~v~avR~a~G~d~~L~vDaN~~~~----~~~A~~-~~~~L~~~~i~~iEe----P------------~~~~d~~~~ 271 (426)
T 4e4f_A 213 FTPKLFEAVRDKFGFNEHLLHDMHHRLT----PIEAAR-FGKSVEDYRLFWMED----P------------TPAENQACF 271 (426)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSC----HHHHHH-HHHHTGGGCCSEEEC----C------------SCCSSGGGG
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCCCC----HHHHHH-HHHHHhhcCCCEEEC----C------------CChHHHHHH
Confidence 5678999999987 5788887777774 334444 356678899988851 1 112224445
Q ss_pred HHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeee
Q 013784 259 YALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMV 295 (436)
Q Consensus 259 ~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~Vmi 295 (436)
.++.+.. ++||++.+.+.+.+++.++++. .+|.|++
T Consensus 272 ~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 272 RLIRQHT-VTPIAVGEVFNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp HHHHTTC-CSCEEECTTCCSGGGTHHHHHTTCCSEECC
T ss_pred HHHHhcC-CCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 5666654 8999999999999999999985 4788874
No 214
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.13 E-value=0.019 Score=55.28 Aligned_cols=190 Identities=15% Similarity=0.091 Sum_probs=118.6
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEecc--ccchhhhhcccch-----hhhhc-----cCCCCCcEEEEE---cCCCHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQGNL-----DRFLA-----FSPEQHPIVLQI---GGSNLDNLA 140 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~tem--v~~~~l~~~~~~~-----~~~~~-----~~~~~~pi~vQL---~g~~p~~~~ 140 (436)
|.+.-|....+++.+.| ...+++.- ++ .. .+.+.+ +..+. ....+.|+++=+ ||.+++...
T Consensus 20 ~~~a~D~~sA~~~~~aG-~~ai~vsg~s~a-~~--~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~ 95 (275)
T 2ze3_A 20 LPNAWDVASARLLEAAG-FTAIGTTSAGIA-HA--RGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVR 95 (275)
T ss_dssp ECEESSHHHHHHHHHHT-CSCEEECHHHHH-HH--SCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHH
T ss_pred EecccCHHHHHHHHHcC-CCEEEECcHHHH-Hh--CCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHH
Confidence 55777888888888886 67666652 22 11 222211 11111 011346888766 456899999
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc---cCCcEEEEeccCCCCC-------Cc
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVSVKCRIGVDDH-------DS 210 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~---~~iPvsvKiR~G~~~~-------~~ 210 (436)
+.++.+.++|+.+|.|--+... . |..+ -..+...+-+++++++ .++|+.|.-|..-... +.
T Consensus 96 ~~v~~l~~aGaagv~iED~~~~-------~-~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~ 166 (275)
T 2ze3_A 96 RTVEHFAALGVAGVNLEDATGL-------T-PTEL-YDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEER 166 (275)
T ss_dssp HHHHHHHHTTCSEEEEECBCSS-------S-SSCB-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHH
T ss_pred HHHHHHHHcCCcEEEECCCcCC-------C-CCcc-CCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhh
Confidence 9999888999999999765421 1 2233 3455555556666554 3788777767532111 13
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC--CCCCHHHHHHHHHc
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINTVDEVNAALRK 288 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG--gI~s~~da~~~l~~ 288 (436)
.+++.+. ++.++++|+|.|.+++... .+.+.++.+.+ ++|+-.++ +..+. .++-+.
T Consensus 167 ~~~ai~R-a~ay~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~~P~n~~~~~~~~~~---~eL~~l 224 (275)
T 2ze3_A 167 LAETVRR-GQAYADAGADGIFVPLALQ-----------------SQDIRALADAL-RVPLNVMAFPGSPVP---RALLDA 224 (275)
T ss_dssp HHHHHHH-HHHHHHTTCSEEECTTCCC-----------------HHHHHHHHHHC-SSCEEEECCTTSCCH---HHHHHT
T ss_pred HHHHHHH-HHHHHHCCCCEEEECCCCC-----------------HHHHHHHHHhc-CCCEEEecCCCCCCH---HHHHHc
Confidence 5555554 4567789999999986421 45666777776 78987764 34444 455568
Q ss_pred CCCeeeehHHHH
Q 013784 289 GAHHVMVGRAAY 300 (436)
Q Consensus 289 Gad~VmiGRa~l 300 (436)
|...|..|-.++
T Consensus 225 Gv~~v~~~~~~~ 236 (275)
T 2ze3_A 225 GAARVSFGQSLM 236 (275)
T ss_dssp TCSEEECTTHHH
T ss_pred CCcEEEEChHHH
Confidence 999998876654
No 215
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.11 E-value=0.013 Score=56.91 Aligned_cols=200 Identities=10% Similarity=0.065 Sum_probs=111.2
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEecc--ccchhhhhccc---chhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~tem--v~~~~l~~~~~---~~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|....+++.+.| ...+++.- ++ ..+.+.+- ..+.++. ....+.|+++=+ +| +++...+.
T Consensus 23 ~~~a~D~~sA~~~~~aG-~~ai~vsg~~~a-~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~v~~~ 99 (295)
T 1s2w_A 23 IMEAHNGLSARIVQEAG-FKGIWGSGLSVS-AQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYG-NFNNARRL 99 (295)
T ss_dssp EEEECSHHHHHHHHHHT-CSCEEECCHHHH-HTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEeChHHHH-HhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCC-CHHHHHHH
Confidence 45778888888888876 66666552 22 11211110 0111111 123467887766 34 57788888
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccc---cccCChHHHHHHHHHHhhccCCcEEEEeccCCC-CCCcHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGV---SLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD-DHDSYNQLCDFI 218 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~---~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~-~~~~~~~~~~~l 218 (436)
++.+.++|+.+|.|--+... ++. |+.|+ .|....+.+..|..++....+.++.|.-|..-. .....+++.+.
T Consensus 100 v~~l~~aGaagv~iED~~~~-k~c--gH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~R- 175 (295)
T 1s2w_A 100 VRKLEDRGVAGACLEDKLFP-KTN--SLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKR- 175 (295)
T ss_dssp HHHHHHTTCCEEEEECBCC-----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHH-
T ss_pred HHHHHHcCCcEEEECCCCCC-ccc--cccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHH-
Confidence 88888999999999866432 222 34442 344444444444444333333344444443211 11224555554
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCC---CCCHHHHHHHHHcCCCeee
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGG---INTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGg---I~s~~da~~~l~~Gad~Vm 294 (436)
++.++++|+|.|.+++... + .+.+.++.+.+. .+|+++|-+ -.+ +.++-+.|+..|.
T Consensus 176 a~ay~eAGAd~i~~e~~~~------~----------~~~~~~i~~~~~~~~P~i~~~~~~~~~~---~~eL~~lGv~~v~ 236 (295)
T 1s2w_A 176 AEAYRNAGADAILMHSKKA------D----------PSDIEAFMKAWNNQGPVVIVPTKYYKTP---TDHFRDMGVSMVI 236 (295)
T ss_dssp HHHHHHTTCSEEEECCCSS------S----------SHHHHHHHHHHTTCSCEEECCSTTTTSC---HHHHHHHTCCEEE
T ss_pred HHHHHHcCCCEEEEcCCCC------C----------HHHHHHHHHHcCCCCCEEEeCCCCCCCC---HHHHHHcCCcEEE
Confidence 5567789999999985211 0 344455555541 399999843 333 5566668999999
Q ss_pred ehHHHHh
Q 013784 295 VGRAAYQ 301 (436)
Q Consensus 295 iGRa~l~ 301 (436)
+|-.++.
T Consensus 237 ~~~~~~r 243 (295)
T 1s2w_A 237 WANHNLR 243 (295)
T ss_dssp ECSHHHH
T ss_pred EChHHHH
Confidence 9877653
No 216
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.10 E-value=0.0054 Score=57.65 Aligned_cols=149 Identities=11% Similarity=0.095 Sum_probs=93.8
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCc-----cc---cCCCccccccCChHHHHHHHHHHhh----
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----VA---GHGCFGVSLMLDPKFVGEAMSVIAA---- 191 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~-----v~---r~g~yG~~Ll~~~~~l~eiv~av~~---- 191 (436)
+.+++.=+-+.+++...+.++.+.+.|++.||+.+-.|... .. ..-.-|+.-.-+.+.+...+.+=.+
T Consensus 33 ~~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 33 ALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp HHCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe
Confidence 45788888899999999999999999999999865433200 00 0000122222345555544443111
Q ss_pred ------------ccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHH
Q 013784 192 ------------NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 259 (436)
Q Consensus 192 ------------~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~ 259 (436)
..++|+.. |. .+.+|+.. +.+.|+|.|-+..... .+ ..+++.
T Consensus 113 P~~~~~vi~~~~~~gi~~ip----Gv---~TptEi~~-----A~~~Gad~vK~FPa~~------------~g--G~~~lk 166 (232)
T 4e38_A 113 PGFNPNTVRACQEIGIDIVP----GV---NNPSTVEA-----ALEMGLTTLKFFPAEA------------SG--GISMVK 166 (232)
T ss_dssp SSCCHHHHHHHHHHTCEEEC----EE---CSHHHHHH-----HHHTTCCEEEECSTTT------------TT--HHHHHH
T ss_pred CCCCHHHHHHHHHcCCCEEc----CC---CCHHHHHH-----HHHcCCCEEEECcCcc------------cc--CHHHHH
Confidence 01233211 11 23444432 2358999998865321 00 257888
Q ss_pred HHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 260 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 260 ~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
.+...++++|+++.||| +++.+.++++.|+.++.+|+.+
T Consensus 167 al~~p~p~ip~~ptGGI-~~~n~~~~l~aGa~~~vgGs~l 205 (232)
T 4e38_A 167 SLVGPYGDIRLMPTGGI-TPSNIDNYLAIPQVLACGGTWM 205 (232)
T ss_dssp HHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBCCEEECGG
T ss_pred HHHHHhcCCCeeeEcCC-CHHHHHHHHHCCCeEEEECchh
Confidence 88877789999999999 5899999999999998887755
No 217
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.09 E-value=0.014 Score=58.71 Aligned_cols=137 Identities=7% Similarity=0.053 Sum_probs=98.8
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEe
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKi 201 (436)
.-|+...+...+++.+++.++.+.+.||..+.+..|. +++.-.+.+++||++++ +++.+..
T Consensus 131 ~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~-----------------~~~~d~~~v~avR~a~g~~~~L~vDa 193 (379)
T 3r0u_A 131 SIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA-----------------DFNRDIQLLKALDNEFSKNIKFRFDA 193 (379)
T ss_dssp EEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHCCTTSEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC-----------------CHHHHHHHHHHHHHhcCCCCeEEEeC
Confidence 3355566777889999888887778899999887652 34556778889998874 6788877
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhc--CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSL--SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~--~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
.-+|+. ++..+ +.+.+++ .++.+|. . .+++.+++...++.+.. ++||.+...+.+.
T Consensus 194 N~~w~~----~~A~~-~~~~l~~~~~~l~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~ 251 (379)
T 3r0u_A 194 NQGWNL----AQTKQ-FIEEINKYSLNVEIIE----Q------------PVKYYDIKAMAEITKFS-NIPVVADESVFDA 251 (379)
T ss_dssp TTCCCH----HHHHH-HHHHHHTSCCCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEESTTCSSH
T ss_pred CCCcCH----HHHHH-HHHHHhhcCCCcEEEE----C------------CCCcccHHHHHHHHhcC-CCCEEeCCccCCH
Confidence 777753 33333 3456677 6777664 1 12223467777777765 8999999999999
Q ss_pred HHHHHHHHc-CCCeeeehHHH
Q 013784 280 DEVNAALRK-GAHHVMVGRAA 299 (436)
Q Consensus 280 ~da~~~l~~-Gad~VmiGRa~ 299 (436)
+++.++++. .+|.|++--+.
T Consensus 252 ~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 252 KDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp HHHHHHHHTTCCSEEEECHHH
T ss_pred HHHHHHHHcCCCCEEEECccc
Confidence 999999995 47888865443
No 218
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.08 E-value=0.0061 Score=55.98 Aligned_cols=124 Identities=16% Similarity=0.155 Sum_probs=75.2
Q ss_pred HHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcH-HHHHHHH
Q 013784 140 AKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSY-NQLCDFI 218 (436)
Q Consensus 140 ~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~-~~~~~~l 218 (436)
.+.++.+.++|+|.|.+|... | . ++++.+++.. -+++............ .+..+.+
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~-----------g------~----~~i~~~~~~~--gv~vl~~t~~~~~~~~~~~~v~~~ 124 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFV-----------G------R----DSVMAVKELG--EIIMVVEMSHPGALEFINPLTDRF 124 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTT-----------C------H----HHHHHHHTTS--EEEEECCCCSGGGGTTTGGGHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccC-----------C------H----HHHHHHHHhC--CcEEEEecCCcchhhHHHHHHHHH
Confidence 445566678999999998532 1 1 1244444433 3444444322211111 2334455
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC-HHHHHHHHHcCCCeeeehH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT-VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s-~~da~~~l~~Gad~VmiGR 297 (436)
+++..+.|++.+.+.+.. .+.+.++.+....-+++..|||.. ..++.++++.|||.+.+||
T Consensus 125 ~~~a~~~G~~G~~~~~~~------------------~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr 186 (208)
T 2czd_A 125 IEVANEIEPFGVIAPGTR------------------PERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGR 186 (208)
T ss_dssp HHHHHHHCCSEEECCCSS------------------THHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECH
T ss_pred HHHHHHhCCcEEEECCCC------------------hHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEECh
Confidence 667778899988654321 233344444443335779999985 3378888899999999999
Q ss_pred HHHhCCc
Q 013784 298 AAYQNPW 304 (436)
Q Consensus 298 a~l~~P~ 304 (436)
+++..+.
T Consensus 187 ~I~~a~d 193 (208)
T 2czd_A 187 AIYNAPN 193 (208)
T ss_dssp HHHTSSS
T ss_pred HHhcCCC
Confidence 9987654
No 219
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.07 E-value=0.004 Score=62.21 Aligned_cols=128 Identities=12% Similarity=0.117 Sum_probs=88.5
Q ss_pred cEEEEEcC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 126 PIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
|....+.. .+++.+.+.|+.+.+.||+.+.++.+ | . .+. +.+++|++.+ ++++.+-..-
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~--------~------~d~----~~v~avr~a~~~~~l~vDan~ 191 (369)
T 2zc8_A 131 EVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK-P--------G------WDY----EVLKAVREAFPEATLTADANS 191 (369)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T--------T------BSH----HHHHHHHHHCTTSCEEEECTT
T ss_pred eceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC-h--------h------HHH----HHHHHHHHHcCCCeEEEecCC
Confidence 33344443 48999999988888899999999863 1 1 233 4455555544 5778887777
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+.. + .++ .+.+++.|+++|. .. +++.+++...++.+.. ++||.+.+.+.+.+++.
T Consensus 192 ~~~~~----~-~~~-~~~l~~~~i~~iE----qP------------~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 248 (369)
T 2zc8_A 192 AYSLA----N-LAQ-LKRLDELRLDYIE----QP------------LAYDDLLDHAKLQREL-STPICLDESLTGAEKAR 248 (369)
T ss_dssp CCCGG----G-HHH-HHGGGGGCCSCEE----CC------------SCTTCSHHHHHHHHHC-SSCEEESTTCCSHHHHH
T ss_pred CCCHH----H-HHH-HHHHHhCCCcEEE----CC------------CCcccHHHHHHHHhhC-CCCEEEcCccCCHHHHH
Confidence 77642 2 332 4457788888877 11 1222366666777665 89999999999999999
Q ss_pred HHHHcC-CCeeee
Q 013784 284 AALRKG-AHHVMV 295 (436)
Q Consensus 284 ~~l~~G-ad~Vmi 295 (436)
++++.| +|.|++
T Consensus 249 ~~i~~~~~d~v~i 261 (369)
T 2zc8_A 249 KAIELGAGRVFNV 261 (369)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHhCCCCEEEE
Confidence 999854 898885
No 220
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.06 E-value=0.00058 Score=64.30 Aligned_cols=51 Identities=16% Similarity=0.229 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 255 YEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 255 ~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
.+++.++++...++||+.-|||.++++++++.+ |||+|.+|+++..||..+
T Consensus 174 ~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~~~~~ 224 (235)
T 3w01_A 174 VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKDIKKA 224 (235)
T ss_dssp HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHCHHHH
T ss_pred HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecCHHHH
Confidence 778878766544899999999999999999888 999999999999999875
No 221
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.04 E-value=0.009 Score=55.97 Aligned_cols=151 Identities=10% Similarity=0.194 Sum_probs=94.6
Q ss_pred hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHH---HHh
Q 013784 114 LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMS---VIA 190 (436)
Q Consensus 114 ~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~---av~ 190 (436)
++.+.+..+ +.|+.+.|...+|+.+.+. +.+ +|.|-+|..... .. +.++++ .++
T Consensus 55 v~~lr~~~p-~~~~dvhLmv~dp~~~i~~---~~~--Ad~itvH~ea~~--------------~~---~~~~i~~~~~i~ 111 (227)
T 1tqx_A 55 INNLKKYTK-SIFFDVHLMVEYPEKYVPL---LKT--SNQLTFHFEALN--------------ED---TERCIQLAKEIR 111 (227)
T ss_dssp HHHHGGGCS-SCEEEEEEESSCGGGGGGG---CTT--SSEEEEEGGGGT--------------TC---HHHHHHHHHHHH
T ss_pred HHHHHHhCC-CCcEEEEEEEcCHHHHHHH---HHh--CCEEEEeecCCc--------------cC---HHHHHHHHHHHH
Confidence 344444433 6899999999999865422 222 788888865321 02 334555 665
Q ss_pred hccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCC-ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcE
Q 013784 191 ANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT 269 (436)
Q Consensus 191 ~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~G-vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iP 269 (436)
+. |.-+.+-+..+.. .+.+ ..++ +.| +|.|.+.+... |.++. ...+..++-+.++.+...+++
T Consensus 112 ~~-G~k~gvalnp~tp----~~~~----~~~l-~~g~~D~VlvmsV~p---Gf~gq---~f~~~~l~ki~~lr~~~~~~~ 175 (227)
T 1tqx_A 112 DN-NLWCGISIKPKTD----VQKL----VPIL-DTNLINTVLVMTVEP---GFGGQ---SFMHDMMGKVSFLRKKYKNLN 175 (227)
T ss_dssp TT-TCEEEEEECTTSC----GGGG----HHHH-TTTCCSEEEEESSCT---TCSSC---CCCGGGHHHHHHHHHHCTTCE
T ss_pred Hc-CCeEEEEeCCCCc----HHHH----HHHh-hcCCcCEEEEeeecc---CCCCc---ccchHHHHHHHHHHHhccCCe
Confidence 53 5555444433221 1111 2222 344 99997776655 33221 112334666767766545789
Q ss_pred EEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 270 FTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 270 VIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
|.+-|||. .+.+.++.+.|||.+.+||+++..++
T Consensus 176 I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 176 IQVDGGLN-IETTEISASHGANIIVAGTSIFNAED 209 (227)
T ss_dssp EEEESSCC-HHHHHHHHHHTCCEEEESHHHHTCSS
T ss_pred EEEECCCC-HHHHHHHHHcCCCEEEEeHHHhCCCC
Confidence 99999995 89999999999999999999988766
No 222
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.03 E-value=0.0069 Score=61.30 Aligned_cols=123 Identities=12% Similarity=-0.039 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHCCCCEEEec-CCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHH
Q 013784 138 NLAKATELANAYNYDEINLN-CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 138 ~~~~aA~~~~~~G~d~IdLN-~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~ 214 (436)
.+++.++.+.+.||..+-++ .|.+ ..+++.-.+++++||+++ ++++.+...-||.+ .++.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~--------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~---~~~A 222 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA--------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTD---WYEV 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC--------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCC---HHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC--------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCC---HHHH
Confidence 56667777778899999884 3211 035677788899999886 57788877777732 2333
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCee
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHV 293 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~V 293 (436)
.++ ++.+++.|+++|. . .+++.+++...++.+.. ++||++.+.+.+.+++.++++. .+|.|
T Consensus 223 ~~~-~~~L~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v 284 (394)
T 3mkc_A 223 ARL-LNSIEDLELYFAE----A------------TLQHDDLSGHAKLVENT-RSRICGAEMSTTRFEAEEWITKGKVHLL 284 (394)
T ss_dssp HHH-HHHTGGGCCSEEE----S------------CSCTTCHHHHHHHHHHC-SSCBEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred HHH-HHHhhhcCCeEEE----C------------CCCchhHHHHHHHHhhC-CCCEEeCCCCCCHHHHHHHHHcCCCCeE
Confidence 443 5567888998875 1 11222467777777765 8999999999999999999985 58888
Q ss_pred ee
Q 013784 294 MV 295 (436)
Q Consensus 294 mi 295 (436)
++
T Consensus 285 ~~ 286 (394)
T 3mkc_A 285 QS 286 (394)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 223
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=96.99 E-value=0.012 Score=59.49 Aligned_cols=134 Identities=9% Similarity=0.049 Sum_probs=92.7
Q ss_pred CHHHHHH-HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcH
Q 013784 135 NLDNLAK-ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 135 ~p~~~~~-aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~ 211 (436)
++++.++ +++...+.||..+.+..|.+... .....++...+.+++||+++ ++++.+...-+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~---------d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~---- 212 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVGR---------NRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTP---- 212 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTCT---------TCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCH----
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCccc---------ccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCH----
Confidence 5655544 44445577999999999876421 11133566778899999986 57788888777753
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 290 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Ga 290 (436)
.+..++ ++.+++.|+.+|. . .+++-+++...++.+.. ++||.+...+.+..++.++++ ..+
T Consensus 213 ~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 274 (388)
T 3tcs_A 213 DRAIEV-GHMLQDHGFCHFE----E------------PCPYWELAQTKQVTDAL-DIDVTGGEQDCDLPTWQRMIDMRAV 274 (388)
T ss_dssp HHHHHH-HHHHHHTTCCEEE----C------------CSCTTCHHHHHHHHHHC-SSCEEECTTCCCHHHHHHHHHHTCC
T ss_pred HHHHHH-HHHHhhcCCeEEE----C------------CCCccCHHHHHHHHHhc-CCCEEcCCccCCHHHHHHHHHcCCC
Confidence 333333 4566788988774 1 12223477777777765 899999999999999999998 458
Q ss_pred CeeeehHHH
Q 013784 291 HHVMVGRAA 299 (436)
Q Consensus 291 d~VmiGRa~ 299 (436)
|.|++--+-
T Consensus 275 d~v~~d~~~ 283 (388)
T 3tcs_A 275 DIVQPDILY 283 (388)
T ss_dssp SEECCCHHH
T ss_pred CEEEeCccc
Confidence 888765433
No 224
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.98 E-value=0.0072 Score=56.08 Aligned_cols=153 Identities=16% Similarity=0.146 Sum_probs=91.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCc-----ccc-----CCCccccccCChHHHHHHHHHH---
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----VAG-----HGCFGVSLMLDPKFVGEAMSVI--- 189 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~-----v~r-----~g~yG~~Ll~~~~~l~eiv~av--- 189 (436)
.+.|++.=|-+.+++++.+.++.+.+.|++.|++..-.|... ..+ .-.+|. + -+.+.+...+.+=
T Consensus 14 ~~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-v-i~~d~~~~A~~aGAd~ 91 (214)
T 1wbh_A 14 TTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-V-LNPQQLAEVTEAGAQF 91 (214)
T ss_dssp HSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-C-CSHHHHHHHHHHTCSC
T ss_pred HHCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-E-EEHHHHHHHHHcCCCE
Confidence 457788888888888888888888888999999875333210 000 001122 1 2223333222220
Q ss_pred -------------hhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHH
Q 013784 190 -------------AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYE 256 (436)
Q Consensus 190 -------------~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~ 256 (436)
++..++|+.. |. .+.+++.+ +.+.|+|+|.++.... . ...+
T Consensus 92 v~~p~~d~~v~~~~~~~g~~~i~----G~---~t~~e~~~-----A~~~Gad~v~~Fpa~~------------~--gG~~ 145 (214)
T 1wbh_A 92 AISPGLTEPLLKAATEGTIPLIP----GI---STVSELML-----GMDYGLKEFKFFPAEA------------N--GGVK 145 (214)
T ss_dssp EEESSCCHHHHHHHHHSSSCEEE----EE---SSHHHHHH-----HHHTTCCEEEETTTTT------------T--THHH
T ss_pred EEcCCCCHHHHHHHHHhCCCEEE----ec---CCHHHHHH-----HHHCCCCEEEEecCcc------------c--cCHH
Confidence 0011222211 21 22333322 2357888888865111 0 0156
Q ss_pred HHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeehHHHHhCCcc
Q 013784 257 YYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 257 ~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiGRa~l~~P~l 305 (436)
++.++...++++||++.||| +++.+.+.++. |+++|. |+++...+++
T Consensus 146 ~lk~i~~~~~~ipvvaiGGI-~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 146 ALQAIAGPFSQVRFCPTGGI-SPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHHTTCTTCEEEEBSSC-CTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHHhhhCCCCeEEEECCC-CHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 77788777778999999999 57899999997 999999 9988666554
No 225
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.97 E-value=0.011 Score=57.87 Aligned_cols=199 Identities=14% Similarity=0.085 Sum_probs=112.1
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEe-ccccchh-hhhccc----------chhhhhccCCCCCcEEEEE---cCCCHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYT-EMLAAET-IIYQQG----------NLDRFLAFSPEQHPIVLQI---GGSNLDNLA 140 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~t-emv~~~~-l~~~~~----------~~~~~~~~~~~~~pi~vQL---~g~~p~~~~ 140 (436)
|.++-|....+++.+.| ...+++ ..-.... +.+.+. ..+.+.+..+.+.|+++=+ +| +++...
T Consensus 29 ~~~a~D~~sA~l~e~aG-f~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~ 106 (307)
T 3lye_A 29 CPGVYDGLSARTAMELG-FKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVA 106 (307)
T ss_dssp EEEECSHHHHHHHHHTT-CSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHH
Confidence 33777888888888886 666664 4322211 111110 1111212222357888776 34 588888
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccc-cccCChHHHHHHHHHHhh--ccCCcEEEEeccCCCCCCcHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGV-SLMLDPKFVGEAMSVIAA--NTNVPVSVKCRIGVDDHDSYNQLCDF 217 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~-~Ll~~~~~l~eiv~av~~--~~~iPvsvKiR~G~~~~~~~~~~~~~ 217 (436)
+.++.+.++|+.+|.|--.... +. .|+.++ .|....+.+..|..++.. ..+.++.|--|..-.....+++.++.
T Consensus 107 ~~v~~l~~aGaagv~iEDq~~~-k~--cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~R 183 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHLEDQILT-KR--CGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIER 183 (307)
T ss_dssp HHHHHHHHTTCCEEEECCBCCC-C----------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCC-cc--cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHH
Confidence 9999999999999999755432 22 233333 344444444444433322 23666666666532111224455554
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe---CC---CCCHHHHHHHHHcCCC
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GG---INTVDEVNAALRKGAH 291 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---Gg---I~s~~da~~~l~~Gad 291 (436)
++...++|+|.|-++|.+. .+.+.++++.+..+||.+| || ..+. .++-+.|+.
T Consensus 184 -a~ay~eAGAD~ifi~~~~~-----------------~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~---~eL~~lGv~ 242 (307)
T 3lye_A 184 -LRAARDEGADVGLLEGFRS-----------------KEQAAAAVAALAPWPLLLNSVENGHSPLITV---EEAKAMGFR 242 (307)
T ss_dssp -HHHHHHTTCSEEEECCCSC-----------------HHHHHHHHHHHTTSCBEEEEETTSSSCCCCH---HHHHHHTCS
T ss_pred -HHHHHHCCCCEEEecCCCC-----------------HHHHHHHHHHccCCceeEEeecCCCCCCCCH---HHHHHcCCe
Confidence 3455679999999986431 4556677766545888776 33 2343 455567999
Q ss_pred eeeehHHHH
Q 013784 292 HVMVGRAAY 300 (436)
Q Consensus 292 ~VmiGRa~l 300 (436)
.|..+-.++
T Consensus 243 ~v~~~~~~~ 251 (307)
T 3lye_A 243 IMIFSFATL 251 (307)
T ss_dssp EEEEETTTH
T ss_pred EEEEChHHH
Confidence 998776544
No 226
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.95 E-value=0.0026 Score=61.45 Aligned_cols=135 Identities=14% Similarity=0.141 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChH---HHHHHHHHHhhccCCcEEEEeccCCCCCCcH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPK---FVGEAMSVIAANTNVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~---~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~ 211 (436)
..+.-..-++.+.+.|+|+||+-+- +|..+..+.+ .+.+-+.+|++.++ ...+|+=+-.....+
T Consensus 104 ~~~~Kv~E~~~Av~~GAdEIDmVin-----------ig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d- 170 (281)
T 2a4a_A 104 SMEKVLNDTEKALDDGADEIDLVIN-----------YKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKT- 170 (281)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC-----------HHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCS-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc-----------hHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCc-
Confidence 3444445556677789999998641 2433345666 88888888988774 234454442111111
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc--------CCCcEEEEeCCCCCHHHHH
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--------FPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~--------~~~iPVIanGgI~s~~da~ 283 (436)
++......+++.++|+|+|-... |+++. + -.+.+...+.+.+++ -.+++|-++|||.|.+++.
T Consensus 171 ~e~i~~A~~ia~eaGADfVKTST------Gf~~~-g--AT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al 241 (281)
T 2a4a_A 171 EDLIIKTTLAVLNGNADFIKTST------GKVQI-N--ATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTAS 241 (281)
T ss_dssp HHHHHHHHHHHHTTTCSEEECCC------SCSSC-C--CCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCC------CCCCC-C--CCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHH
Confidence 23222345667789999998652 22110 0 011123444555532 2479999999999999999
Q ss_pred HHHHcCCC
Q 013784 284 AALRKGAH 291 (436)
Q Consensus 284 ~~l~~Gad 291 (436)
++++.|++
T Consensus 242 ~~i~aga~ 249 (281)
T 2a4a_A 242 HYILLARR 249 (281)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99987554
No 227
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.94 E-value=0.0083 Score=56.15 Aligned_cols=137 Identities=13% Similarity=0.065 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHH
Q 013784 136 LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLC 215 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~ 215 (436)
.+.-..-++. .+.|+|.||+-+- +|...-.+.+.+.+-+.+|++.++- ..+|+=+-.... +.+++.
T Consensus 66 ~~~k~~E~~~-i~~GAdEID~Vin-----------ig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~ 131 (226)
T 1vcv_A 66 TASRIALVSR-LAEVADEIDVVAP-----------IGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERY 131 (226)
T ss_dssp HHHHHHHHHH-HTTTCSEEEEECC-----------HHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHH
T ss_pred hHHHHHHHHH-HHCCCCEEEEecc-----------hhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHH
Confidence 3433344455 6789999998641 3444446778888888888887642 244533322111 233333
Q ss_pred HHHHHHhhcCCccEEEEc-cCcc----cccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHc-
Q 013784 216 DFIYKVSSLSPTRHFIIH-SRKA----LLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRK- 288 (436)
Q Consensus 216 ~~la~~~e~~Gvd~I~vh-grt~----~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~- 288 (436)
...+++.++|+|+|-.+ |-.. ...|..+ + -.+.+.+.+.+.++.. .+++|-++|||.+.+++.++++.
T Consensus 132 -~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~--g--At~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a~ 206 (226)
T 1vcv_A 132 -TLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPV--H--STPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDAI 206 (226)
T ss_dssp -HHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCS--S--CCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCEEEeCCCCCccccccccCCCC--C--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 34566778999999865 2110 0001001 0 0111234444443333 36999999999999999999998
Q ss_pred --CCC
Q 013784 289 --GAH 291 (436)
Q Consensus 289 --Gad 291 (436)
||+
T Consensus 207 ~~Ga~ 211 (226)
T 1vcv_A 207 GWGED 211 (226)
T ss_dssp CSCSC
T ss_pred HCCCC
Confidence 887
No 228
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.90 E-value=0.0014 Score=60.50 Aligned_cols=74 Identities=14% Similarity=-0.071 Sum_probs=52.7
Q ss_pred CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCC
Q 013784 225 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 225 ~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 303 (436)
.|+|+|.+.+--.. .. ... .-++..++.+..+.+.. .++||++.|||. ++.+.++++.||++|.+++++...+
T Consensus 106 ~GaDyv~~g~vf~t--~s--k~~-~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVav~s~i~~~~ 179 (210)
T 3ceu_A 106 HFYDYVFMSPIYDS--IS--KVN-YYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAVVLGDLWNKF 179 (210)
T ss_dssp GGSSEEEECCCC--------------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEEESHHHHTTC
T ss_pred hCCCEEEECCcCCC--CC--CCC-CCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEEEhHHhHcCC
Confidence 79999997543110 00 000 01234578888877653 489999999997 8999999999999999999998755
Q ss_pred c
Q 013784 304 W 304 (436)
Q Consensus 304 ~ 304 (436)
+
T Consensus 180 d 180 (210)
T 3ceu_A 180 D 180 (210)
T ss_dssp C
T ss_pred C
Confidence 4
No 229
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.88 E-value=0.024 Score=55.04 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=114.5
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEecc--ccchhhhhccc---chhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~tem--v~~~~l~~~~~---~~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|.....++.+.| ...+++.- ++.. +.+.+- ..+..+. ....+.|+++=+ +| +++...+.
T Consensus 19 ~~~a~D~~sA~~~~~aG-~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~ 95 (290)
T 2hjp_A 19 AMAAHNPLVAKLAEQAG-FGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYV 95 (290)
T ss_dssp EEECSSHHHHHHHHHHT-CSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHH
T ss_pred EecCCCHHHHHHHHHcC-CCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHH
Confidence 45788889999988886 77777663 3222 222111 1111111 123467877665 35 88889999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCcc--ccccCChHHHHHHHHHHhhc-c--CCcEEEEeccCCCCCCcHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFG--VSLMLDPKFVGEAMSVIAAN-T--NVPVSVKCRIGVDDHDSYNQLCDF 217 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG--~~Ll~~~~~l~eiv~av~~~-~--~iPvsvKiR~G~~~~~~~~~~~~~ 217 (436)
++.+.++|+.+|.|--+... ++. |+.| +.-+-..+...+-+++++.+ . ++-|..++-.-+. ....+++.+.
T Consensus 96 v~~l~~aGa~gv~iED~~~~-k~c--gH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a-~~g~~~ai~R 171 (290)
T 2hjp_A 96 VPQYEAAGASAIVMEDKTFP-KDT--SLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIA-GLGQQEAVRR 171 (290)
T ss_dssp HHHHHHHTCSEEEEECBCSS-CCC---------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTT-TCCHHHHHHH
T ss_pred HHHHHHhCCeEEEEcCCCCC-ccc--cccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhc-cccHHHHHHH
Confidence 99888999999999766432 222 4444 33333443334444444443 2 3334444332211 1235566554
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC--cEEEEe---CCCCCHHHHHHHHHcC-CC
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD--LTFTLN---GGINTVDEVNAALRKG-AH 291 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~--iPVIan---GgI~s~~da~~~l~~G-ad 291 (436)
++.++++|+|.|.++++.. ..+.+.++.+.+ + +|+|+| +...+ ..++-+.| +.
T Consensus 172 -a~ay~eAGAd~i~~e~~~~----------------~~~~~~~i~~~~-~~~vP~i~n~~~~~~~~---~~eL~~lG~v~ 230 (290)
T 2hjp_A 172 -GQAYEEAGADAILIHSRQK----------------TPDEILAFVKSW-PGKVPLVLVPTAYPQLT---EADIAALSKVG 230 (290)
T ss_dssp -HHHHHHTTCSEEEECCCCS----------------SSHHHHHHHHHC-CCSSCEEECGGGCTTSC---HHHHHTCTTEE
T ss_pred -HHHHHHcCCcEEEeCCCCC----------------CHHHHHHHHHHc-CCCCCEEEeccCCCCCC---HHHHHhcCCee
Confidence 4567789999999987431 034456677766 5 999987 32344 34555689 99
Q ss_pred eeeehHHHH
Q 013784 292 HVMVGRAAY 300 (436)
Q Consensus 292 ~VmiGRa~l 300 (436)
.|.+|-.++
T Consensus 231 ~v~~~~~~~ 239 (290)
T 2hjp_A 231 IVIYGNHAI 239 (290)
T ss_dssp EEEECSHHH
T ss_pred EEEechHHH
Confidence 898887655
No 230
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.86 E-value=0.014 Score=60.05 Aligned_cols=144 Identities=15% Similarity=0.089 Sum_probs=100.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+-|+.-+=|.-++-+.. + +..+|+|.|=|++.+- +.+.+.++++..++ .|+.+.+-
T Consensus 107 v~lPvLrKDFI~d~~Qi~---e-a~~~GAD~ILLi~a~l----------------~~~~l~~l~~~a~~-lgm~~LvE-- 163 (452)
T 1pii_A 107 APQPILCKDFIIDPYQIY---L-ARYYQADACLLMLSVL----------------DDDQYRQLAAVAHS-LEMGVLTE-- 163 (452)
T ss_dssp CCSCEEEESCCCSHHHHH---H-HHHTTCSEEEEETTTC----------------CHHHHHHHHHHHHH-TTCEEEEE--
T ss_pred cCCCeEEEeccCCHHHHH---H-HHHcCCCEEEEEcccC----------------CHHHHHHHHHHHHH-cCCeEEEE--
Confidence 467888888887776433 3 6678999999997631 12457777777665 46555442
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~d 281 (436)
..+.+|+.. . .+.|++.|-+..|.- ... ..+++...++++..+ +++||+-|||.+++|
T Consensus 164 -----vh~~eE~~~----A-~~lga~iIGinnr~L--~t~---------~~dl~~~~~L~~~ip~~~~vIaEsGI~t~ed 222 (452)
T 1pii_A 164 -----VSNEEEQER----A-IALGAKVVGINNRDL--RDL---------SIDLNRTRELAPKLGHNVTVISESGINTYAQ 222 (452)
T ss_dssp -----ECSHHHHHH----H-HHTTCSEEEEESEET--TTT---------EECTHHHHHHHHHHCTTSEEEEESCCCCHHH
T ss_pred -----eCCHHHHHH----H-HHCCCCEEEEeCCCC--CCC---------CCCHHHHHHHHHhCCCCCeEEEECCCCCHHH
Confidence 234555432 2 358999999887742 111 223666666666544 689999999999999
Q ss_pred HHHHHHcCCCeeeehHHHHhCCcchhhhhhh
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPWYTLGHVDT 312 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~lf~~~~~~ 312 (436)
+.++.+. +|+|.||.+++..++. .+.+..
T Consensus 223 v~~~~~~-a~avLVGealmr~~d~-~~~~~~ 251 (452)
T 1pii_A 223 VRELSHF-ANGFLIGSALMAHDDL-HAAVRR 251 (452)
T ss_dssp HHHHTTT-CSEEEECHHHHTCSCH-HHHHHH
T ss_pred HHHHHHh-CCEEEEcHHHcCCcCH-HHHHHH
Confidence 9999999 9999999999999886 344443
No 231
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.80 E-value=0.0041 Score=59.47 Aligned_cols=141 Identities=17% Similarity=0.216 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc---CCcEEEEeccCCCCCCcH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~---~iPvsvKiR~G~~~~~~~ 211 (436)
..+.-..-++.+.+.|+|.||+-+- +|..+-.+.+.+.+-+.+|++.+ +.|+-|-+-.+.-. +
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVin-----------ig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~--d- 148 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVFP-----------YRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELK--D- 148 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECC-----------HHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHC--S-
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecc-----------HHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCC--c-
Confidence 3444445556677789999998641 24333356677888888888765 34543333332211 1
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc---CCCcEEEEeCCCCCHHHHHHHHHc
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD---FPDLTFTLNGGINTVDEVNAALRK 288 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~---~~~iPVIanGgI~s~~da~~~l~~ 288 (436)
++......+++.++|+|+|-.+. |+++. +- .+.+...+.+.+++ -.+++|-++|||.+.+++.++++.
T Consensus 149 ~e~i~~a~~ia~eaGADfVKTST------Gf~~~-gA--t~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~a 219 (260)
T 1p1x_A 149 EALIRKASEISIKAGADFIKTST------GKVAV-NA--TPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI 219 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCC------SCSSC-CC--CHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCC------CCCCC-CC--CHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHh
Confidence 23222345667789999998652 22110 00 01112244454442 247999999999999999999986
Q ss_pred CCCeeeehHHHHhCCcc
Q 013784 289 GAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 289 Gad~VmiGRa~l~~P~l 305 (436)
|++ .++..|+
T Consensus 220 ga~-------~lG~~w~ 229 (260)
T 1p1x_A 220 ADE-------LFGADWA 229 (260)
T ss_dssp HHH-------HHCTTSC
T ss_pred hhh-------hcccccc
Confidence 544 5677776
No 232
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.79 E-value=0.0023 Score=59.93 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=51.0
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeeeehHHHHh
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVMVGRAAYQ 301 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~VmiGRa~l~ 301 (436)
.+.|+|+|.++.-.. .. ..+++.++...++++||++.||| +++.+.+.++. |+++|. |+++..
T Consensus 127 ~~~Gad~vk~Fpa~~------------~g--G~~~lk~l~~~~~~ipvvaiGGI-~~~N~~~~l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 127 LEMGISAVKFFPAEA------------SG--GVKMIKALLGPYAQLQIMPTGGI-GLHNIRDYLAIPNIVACG-GSWFVE 190 (224)
T ss_dssp HHTTCCEEEETTTTT------------TT--HHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHTSTTBCCEE-ECGGGC
T ss_pred HHCCCCEEEEeeCcc------------cc--CHHHHHHHHhhCCCCeEEEECCc-CHHHHHHHHhcCCCEEEE-EchhcC
Confidence 458999999865111 00 15677777777778999999999 67899999997 999999 998866
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
.+++
T Consensus 191 ~~~i 194 (224)
T 1vhc_A 191 KKLI 194 (224)
T ss_dssp HHHH
T ss_pred cchh
Confidence 5553
No 233
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.79 E-value=0.018 Score=56.17 Aligned_cols=201 Identities=14% Similarity=0.112 Sum_probs=112.5
Q ss_pred CCCChHHHHHHHHHcCCCcEEEe-ccccchh-hhhccc---chhhhh----cc-C-CCCCcEEEEE---cCCCHHHHHHH
Q 013784 77 MDWTDNHYRTLARLISKHAWLYT-EMLAAET-IIYQQG---NLDRFL----AF-S-PEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 77 agvtd~~fr~~~~~~Gg~gl~~t-emv~~~~-l~~~~~---~~~~~~----~~-~-~~~~pi~vQL---~g~~p~~~~~a 142 (436)
.++-|....+++.+.| ...+++ ..-.... +.+.+. ....++ .+ . ..+.|+++=+ +| +++...+.
T Consensus 23 ~~a~D~~sA~l~e~aG-f~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~t 100 (302)
T 3fa4_A 23 PGVYDGLSARVALSAG-FDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-GPIMVART 100 (302)
T ss_dssp EEECSHHHHHHHHTTT-CSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHH
T ss_pred ecCcCHHHHHHHHHcC-CCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHH
Confidence 3777888888888775 666654 4222111 111110 011111 11 1 1367888777 34 58888899
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCc-cccccCChHHHHHHHHHHhhc--cCCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCF-GVSLMLDPKFVGEAMSVIAAN--TNVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~y-G~~Ll~~~~~l~eiv~av~~~--~~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
++.+.++|+.+|.|--.... |-+ |+. |..+....+.+..|..++... .+.++.+--|........+++.++. +
T Consensus 101 v~~l~~aGaagv~iEDq~~~-Krc--gh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~R-a 176 (302)
T 3fa4_A 101 TEQYSRSGVAAFHIEDQVQT-KRC--GHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVAR-L 176 (302)
T ss_dssp HHHHHHTTCCEEEECSBCCC----------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHH-H
T ss_pred HHHHHHcCCcEEEECCCCCC-ccc--CCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHH-H
Confidence 99999999999999754322 211 222 333444445555554443222 3556666556532111234555554 3
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe---CCCCCHHHHHHHHHcCCCeeeeh
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---GGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---GgI~s~~da~~~l~~Gad~VmiG 296 (436)
+...++|+|.|-++|-+. .+.+.++++.+..+|+.+| ||-...-...++-+.|+..|..+
T Consensus 177 ~ay~eAGAD~ifi~g~~~-----------------~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~ 239 (302)
T 3fa4_A 177 RAARDAGADVGFLEGITS-----------------REMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIFP 239 (302)
T ss_dssp HHHHTTTCSEEEETTCCC-----------------HHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEET
T ss_pred HHHHHcCCCEEeecCCCC-----------------HHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCCEEEEc
Confidence 455679999999987431 4566777777655888876 33211112444556799988877
Q ss_pred HHHH
Q 013784 297 RAAY 300 (436)
Q Consensus 297 Ra~l 300 (436)
-.++
T Consensus 240 ~~~~ 243 (302)
T 3fa4_A 240 FAAL 243 (302)
T ss_dssp TTTH
T ss_pred hHHH
Confidence 5554
No 234
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.78 E-value=0.0044 Score=58.26 Aligned_cols=144 Identities=10% Similarity=0.069 Sum_probs=91.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+.|+-+-|...+|+.+. +.+.++|+|.|-+|.-.+. .. +.++++.+++. |..+.+-+.
T Consensus 56 ~~~~~dvhLmv~dp~~~i---~~~~~aGAd~itvh~Ea~~--------------~~---~~~~i~~i~~~-G~k~gv~ln 114 (231)
T 3ctl_A 56 ATKPLDCHLMVTRPQDYI---AQLARAGADFITLHPETIN--------------GQ---AFRLIDEIRRH-DMKVGLILN 114 (231)
T ss_dssp CCSCEEEEEESSCGGGTH---HHHHHHTCSEEEECGGGCT--------------TT---HHHHHHHHHHT-TCEEEEEEC
T ss_pred cCCcEEEEEEecCHHHHH---HHHHHcCCCEEEECcccCC--------------cc---HHHHHHHHHHc-CCeEEEEEE
Confidence 368999999999998764 5566789999998854321 11 44666666553 555555444
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCCCCC
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINT 278 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGgI~s 278 (436)
.+.. .+.+ ..++ .++|.|.+.+... |.++.. . .+..++.+.++.+.. .+++|.+-|||.
T Consensus 115 p~tp----~~~~----~~~l--~~~D~VlvmsV~p---GfggQ~--f-~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~- 177 (231)
T 3ctl_A 115 PETP----VEAM----KYYI--HKADKITVMTVDP---GFAGQP--F-IPEMLDKLAELKAWREREGLEYEIEVDGSCN- 177 (231)
T ss_dssp TTCC----GGGG----TTTG--GGCSEEEEESSCT---TCSSCC--C-CTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-
T ss_pred CCCc----HHHH----HHHH--hcCCEEEEeeecc---CcCCcc--c-cHHHHHHHHHHHHHHhccCCCceEEEECCcC-
Confidence 4321 1111 1222 3789998776665 332211 1 222244444443321 268999999996
Q ss_pred HHHHHHHHHcCCCeeeeh-HHHHhCCc
Q 013784 279 VDEVNAALRKGAHHVMVG-RAAYQNPW 304 (436)
Q Consensus 279 ~~da~~~l~~Gad~VmiG-Ra~l~~P~ 304 (436)
.+.+.++.+.|||.+.+| |+++..++
T Consensus 178 ~~~~~~~~~aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 178 QATYEKLMAAGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp TTTHHHHHHHTCCEEEECTTTTGGGCS
T ss_pred HHHHHHHHHcCCCEEEEccHHHhCCCC
Confidence 688999999999999999 99877554
No 235
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.75 E-value=0.0095 Score=55.35 Aligned_cols=155 Identities=14% Similarity=0.104 Sum_probs=97.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCc-----cc---cCCCccccccCChHHHHHHHHHHhhc--
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPK-----VA---GHGCFGVSLMLDPKFVGEAMSVIAAN-- 192 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~-----v~---r~g~yG~~Ll~~~~~l~eiv~av~~~-- 192 (436)
...|++.=|-+.++++....++.+.+.|++.||+.+-.|... .. ..--.|+.-.-+++.+.+.+++=.+-
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 457899989999999999999999999999999976544210 00 00012333334555555554441110
Q ss_pred --------------cCC------cEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCC
Q 013784 193 --------------TNV------PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP 252 (436)
Q Consensus 193 --------------~~i------PvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~ 252 (436)
.++ |+.- |. .+.+|+.. +.++|+|.|-++.... .+
T Consensus 91 sP~~~~evi~~~~~~~v~~~~~~~~~P----G~---~TptE~~~-----A~~~Gad~vK~FPa~~------------~g- 145 (217)
T 3lab_A 91 SPGLTPELIEKAKQVKLDGQWQGVFLP----GV---ATASEVMI-----AAQAGITQLKCFPASA------------IG- 145 (217)
T ss_dssp ESSCCHHHHHHHHHHHHHCSCCCEEEE----EE---CSHHHHHH-----HHHTTCCEEEETTTTT------------TT-
T ss_pred eCCCcHHHHHHHHHcCCCccCCCeEeC----CC---CCHHHHHH-----HHHcCCCEEEECcccc------------cc-
Confidence 122 2211 11 23444332 2358999998764321 11
Q ss_pred ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 253 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 253 ~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
..+++..+...++++|+++.|||. ++.+.++++.|+..+..| ..+..|.+
T Consensus 146 -G~~~lkal~~p~p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgG-s~l~~~~~ 195 (217)
T 3lab_A 146 -GAKLLKAWSGPFPDIQFCPTGGIS-KDNYKEYLGLPNVICAGG-SWLTESKL 195 (217)
T ss_dssp -HHHHHHHHHTTCTTCEEEEBSSCC-TTTHHHHHHSTTBCCEEE-SGGGCHHH
T ss_pred -CHHHHHHHHhhhcCceEEEeCCCC-HHHHHHHHHCCCEEEEEC-hhhcChhH
Confidence 157788888878899999999996 899999999999888665 34455543
No 236
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=96.74 E-value=0.0097 Score=60.33 Aligned_cols=135 Identities=9% Similarity=0.055 Sum_probs=94.8
Q ss_pred CcEEEEEc-CCC--HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEE
Q 013784 125 HPIVLQIG-GSN--LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSV 199 (436)
Q Consensus 125 ~pi~vQL~-g~~--p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsv 199 (436)
-|+...+. ..+ ++.+++.++.+.+.||+.+.++.+ | . .+ .+.+++||+++ ++++.+
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~--------~------~d----~~~v~avR~a~G~~~~L~v 210 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P--------G------WD----VEPLQETRRAVGDHFPLWT 210 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T--------T------BS----HHHHHHHHHHHCTTSCEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c--------c------hH----HHHHHHHHHhcCCCCEEEE
Confidence 34555554 335 999998888877789999998863 1 1 23 45666777765 578888
Q ss_pred EeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 200 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 200 KiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
...-+|+..+ .++ .+.+++.|+++|. . .+++.+++...++.+.. ++||.+...+.+.
T Consensus 211 DaN~~w~~~~-----~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~ 267 (400)
T 3mwc_A 211 DANSSFELDQ-----WET-FKAMDAAKCLFHE----Q------------PLHYEALLDLKELGERI-ETPICLDESLISS 267 (400)
T ss_dssp ECTTCCCGGG-----HHH-HHHHGGGCCSCEE----S------------CSCTTCHHHHHHHHHHS-SSCEEESTTCCSH
T ss_pred eCCCCCCHHH-----HHH-HHHHHhcCCCEEe----C------------CCChhhHHHHHHHHhhC-CCCEEEeCCcCCH
Confidence 8888887532 232 3566778888875 1 12233477777777765 8999999999999
Q ss_pred HHHHHHHH-cCCCeeeehHHHHh
Q 013784 280 DEVNAALR-KGAHHVMVGRAAYQ 301 (436)
Q Consensus 280 ~da~~~l~-~Gad~VmiGRa~l~ 301 (436)
+++.++++ ..+|.|++--+-.+
T Consensus 268 ~~~~~~~~~~~~d~v~~k~~~~G 290 (400)
T 3mwc_A 268 RVAEFVAKLGISNIWNIKIQRVG 290 (400)
T ss_dssp HHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHhcCCCCEEEEcchhhC
Confidence 99999998 45899987655444
No 237
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.70 E-value=0.021 Score=54.96 Aligned_cols=157 Identities=16% Similarity=0.145 Sum_probs=86.6
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc-----hhhhhc----c-CCCCCcEEE-EE-cCC---CHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN-----LDRFLA----F-SPEQHPIVL-QI-GGS---NLDNLA 140 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~-----~~~~~~----~-~~~~~pi~v-QL-~g~---~p~~~~ 140 (436)
|.+.-|..+.+++.+.| .+.+.++-..... ..+.+. .+.++. + .....|+++ =+ ||+ +++...
T Consensus 38 ~~tayDa~sA~l~e~aG-~d~ilvGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~ 115 (281)
T 1oy0_A 38 MLTAYDYSTARIFDEAG-IPVLLVGDSAANV-VYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAAL 115 (281)
T ss_dssp EEECCSHHHHHHHHTTT-CCEEEECTTHHHH-TTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHH
Confidence 66888999999998885 8888776322211 111111 111111 1 113456555 33 233 577655
Q ss_pred H-HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEE---------EeccCCCCC--
Q 013784 141 K-ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSV---------KCRIGVDDH-- 208 (436)
Q Consensus 141 ~-aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsv---------KiR~G~~~~-- 208 (436)
+ +.++++++|+++|.|--| +...+.+++++++ ++||.- ...-|+...
T Consensus 116 ~na~rl~~eaGa~aVklEdg--------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~gr 174 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGG--------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQGR 174 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBS--------------------GGGHHHHHHHHHH-TCCEEEEEECCC--------------
T ss_pred HHHHHHHHHhCCeEEEECCc--------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEeC
Confidence 5 666777799999988644 0123344444332 677652 111122110
Q ss_pred -CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC
Q 013784 209 -DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 275 (436)
Q Consensus 209 -~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg 275 (436)
+..+++.+. ++.++++|++.|.+.+-. -+...++.+.. ++|+|+-|.
T Consensus 175 t~~a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 222 (281)
T 1oy0_A 175 GDAAEQTIAD-AIAVAEAGAFAVVMEMVP------------------AELATQITGKL-TIPTVGIGA 222 (281)
T ss_dssp CHHHHHHHHH-HHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred cHHHHHHHHH-HHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeCC
Confidence 034455554 567788999999997532 24455666765 899998763
No 238
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.68 E-value=0.0027 Score=58.83 Aligned_cols=139 Identities=17% Similarity=0.146 Sum_probs=82.4
Q ss_pred CcEE--EEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 125 HPIV--LQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 125 ~pi~--vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.|++ +-+. ..|+.+. +.+.++|+|.|-++...+ .+.+.++++.+++. |+...+. -
T Consensus 60 ~~i~ld~~l~-d~p~~~~---~~~~~aGad~i~vh~~~~-----------------~~~~~~~~~~~~~~-g~~~~~d-~ 116 (218)
T 3jr2_A 60 HILVCDMKTT-DGGAILS---RMAFEAGADWITVSAAAH-----------------IATIAACKKVADEL-NGEIQIE-I 116 (218)
T ss_dssp SEEEEEEEEC-SCHHHHH---HHHHHHTCSEEEEETTSC-----------------HHHHHHHHHHHHHH-TCEEEEE-C
T ss_pred CcEEEEEeec-ccHHHHH---HHHHhcCCCEEEEecCCC-----------------HHHHHHHHHHHHHh-CCcccee-e
Confidence 4554 3444 3466543 566778999998885321 23456677776654 5443321 2
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEc-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
+|.. +.++..+ + .+.|+|++.++ +.+....|.. ..+..++.++++.. +++||++.||| +++.
T Consensus 117 l~~~---T~~~~~~----~-~~~g~d~v~~~~~~~~~~~g~~------~~~~~l~~i~~~~~--~~~pi~v~GGI-~~~~ 179 (218)
T 3jr2_A 117 YGNW---TMQDAKA----W-VDLGITQAIYHRSRDAELAGIG------WTTDDLDKMRQLSA--LGIELSITGGI-VPED 179 (218)
T ss_dssp CSSC---CHHHHHH----H-HHTTCCEEEEECCHHHHHHTCC------SCHHHHHHHHHHHH--TTCEEEEESSC-CGGG
T ss_pred eecC---CHHHHHH----H-HHcCccceeeeeccccccCCCc------CCHHHHHHHHHHhC--CCCCEEEECCC-CHHH
Confidence 3332 2233322 2 34699998764 3333222211 11212444555443 38999999999 6899
Q ss_pred HHHHHHcCCCeeeehHHHHhCC
Q 013784 282 VNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P 303 (436)
+.++++.|||+|.+||++...+
T Consensus 180 ~~~~~~aGAd~vvvGsaI~~a~ 201 (218)
T 3jr2_A 180 IYLFEGIKTKTFIAGRALAGAE 201 (218)
T ss_dssp GGGGTTSCEEEEEESGGGSHHH
T ss_pred HHHHHHcCCCEEEEchhhcCCC
Confidence 9999999999999999876533
No 239
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=96.65 E-value=0.012 Score=59.52 Aligned_cols=127 Identities=8% Similarity=-0.066 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHHHH
Q 013784 137 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 137 ~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~~~ 214 (436)
+.+++.|+.+.+.||+.+.++.|-..... + + .++.+...+++++|++.+ ++++.+-..-+|+ .++.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~---~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~----~~~a 217 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHM---P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYN----LNLT 217 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTS---C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCC----HHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccC---C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----HHHH
Confidence 88999999888999999999865211000 0 0 125677788999999876 4667665544553 4455
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc-----CCCcEEEEeCCCCCHHHHHHHHHcC
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD-----FPDLTFTLNGGINTVDEVNAALRKG 289 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~-----~~~iPVIanGgI~s~~da~~~l~~G 289 (436)
.++ .+.+++.|+++|. .. ++ .+++...++.+. . ++||++.+ +.+++++.++++.|
T Consensus 218 i~~-~~~l~~~~i~~iE----~P------------~~-~d~~~~~~l~~~l~~~g~-~iPIa~dE-~~~~~~~~~~i~~~ 277 (392)
T 3p3b_A 218 KEV-LAALSDVNLYWLE----EA------------FH-EDEALYEDLKEWLGQRGQ-NVLIADGE-GLASPHLIEWATRG 277 (392)
T ss_dssp HHH-HHHTTTSCEEEEE----CS------------SS-CCHHHHHHHHHHHHHHTC-CCEEEECC-SSCCTTHHHHHHTT
T ss_pred HHH-HHHHHhcCCCEEe----cC------------Cc-ccHHHHHHHHHhhccCCC-CccEEecC-CCCHHHHHHHHHcC
Confidence 554 4557788888765 11 11 236666677665 4 89999999 99999999999955
Q ss_pred -CCeeee
Q 013784 290 -AHHVMV 295 (436)
Q Consensus 290 -ad~Vmi 295 (436)
+|.|++
T Consensus 278 ~~d~v~i 284 (392)
T 3p3b_A 278 RVDVLQY 284 (392)
T ss_dssp SCCEECC
T ss_pred CCCEEEe
Confidence 888874
No 240
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=96.61 E-value=0.036 Score=55.94 Aligned_cols=135 Identities=11% Similarity=0.042 Sum_probs=95.6
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc---CCcEEEEe
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~---~iPvsvKi 201 (436)
-|+...+...+++.+++.++.+.+.||..+.+..|++ +++.-.+.+++||+++ ++++.+..
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~----------------~~~~d~~~v~avR~a~gg~~~~L~vDa 217 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR----------------PVEIDIETVRKVWERIRGTGTRLAVDG 217 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS----------------CHHHHHHHHHHHHHHHTTTTCEEEEEC
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC----------------CHHHHHHHHHHHHHHhCCCCCeEEEeC
Confidence 3555667778999999988888888999999987753 2444556777777764 46677777
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-+|+. .+..++ .+.+++.++ +|- . + ..+++...++.+.. ++||.+...+.+..+
T Consensus 218 N~~w~~----~~A~~~-~~~L~~~~i-~iE-----e------P-------~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~ 272 (391)
T 4e8g_A 218 NRSLPS----RDALRL-SRECPEIPF-VLE-----Q------P-------CNTLEEIAAIRGRV-QHGIYLDESGEDLST 272 (391)
T ss_dssp TTCCCH----HHHHHH-HHHCTTSCE-EEE-----S------C-------SSSHHHHHHHGGGC-CSCEEESTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHHhhcCe-EEe-----c------C-------CccHHHHHHHHhhC-CCCEEeCCCCCCHHH
Confidence 777753 333333 456677777 653 1 0 11367777776665 899999999999999
Q ss_pred HHHHHHc-CCCeeeehHHHH
Q 013784 282 VNAALRK-GAHHVMVGRAAY 300 (436)
Q Consensus 282 a~~~l~~-Gad~VmiGRa~l 300 (436)
+.++++. .+|.|++--+-.
T Consensus 273 ~~~~~~~~a~d~v~ik~~~~ 292 (391)
T 4e8g_A 273 VIRAAGQGLCDGFGMKLTRI 292 (391)
T ss_dssp HHHHHHTTCCSEEEEEHHHH
T ss_pred HHHHHHcCCCCEEEeCcccc
Confidence 9999984 589988755443
No 241
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=96.60 E-value=0.027 Score=56.65 Aligned_cols=136 Identities=12% Similarity=0.071 Sum_probs=92.5
Q ss_pred cEEEEEcCCCHHH-HHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEec
Q 013784 126 PIVLQIGGSNLDN-LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCR 202 (436)
Q Consensus 126 pi~vQL~g~~p~~-~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR 202 (436)
|+..-+...+++. +.++++.+++.||..+.+..|+. +++.-.+.+++||++++ +++.+...
T Consensus 139 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 139 PVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG----------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS----------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC----------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 4444454456655 45555666667999998876542 24445677888888764 67888777
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-+|+. .+..+ +.+.+++.|+.+|. . .+++.+++...++.+.. ++||.+...+.+..++
T Consensus 203 ~~~~~----~~A~~-~~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 260 (382)
T 3dgb_A 203 QAWDE----AVALR-ACRILGGNGIDLIE----Q------------PISRNNRAGMVRLNASS-PAPIMADESIECVEDA 260 (382)
T ss_dssp TCBCH----HHHHH-HHHHHHTTTCCCEE----C------------CBCTTCHHHHHHHHHHC-SSCEEESTTCSSHHHH
T ss_pred CCCCH----HHHHH-HHHHHhhcCcCeee----C------------CCCccCHHHHHHHHHhC-CCCEEeCCCcCCHHHH
Confidence 77753 23333 34566778888774 1 12233477777777765 8999999999999999
Q ss_pred HHHHH-cCCCeeeehHHH
Q 013784 283 NAALR-KGAHHVMVGRAA 299 (436)
Q Consensus 283 ~~~l~-~Gad~VmiGRa~ 299 (436)
.++++ ..+|.|++--.-
T Consensus 261 ~~~~~~~~~d~v~~k~~~ 278 (382)
T 3dgb_A 261 FNLAREGAASVFALKIAK 278 (382)
T ss_dssp HHHHHHTCCSEEEECHHH
T ss_pred HHHHHcCCCCEEEecccc
Confidence 99998 568999875443
No 242
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.57 E-value=0.012 Score=54.91 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=50.2
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCeeeehHHHHh
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQ 301 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~VmiGRa~l~ 301 (436)
.+.|+|+|-++.... .. ..+++..+...++++||++.||| +.+.+.+.++ .|+++|. |++++.
T Consensus 136 ~~~Gad~vk~FPa~~-~~-------------G~~~lk~i~~~~~~ipvvaiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 136 YALGYRRFKLFPAEI-SG-------------GVAAIKAFGGPFGDIRFCPTGGV-NPANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp HTTTCCEEEETTHHH-HT-------------HHHHHHHHHTTTTTCEEEEBSSC-CTTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred HHCCCCEEEEccCcc-cc-------------CHHHHHHHHhhCCCCeEEEECCC-CHHHHHHHHhccCCEEEE-EchhcC
Confidence 357888888865111 00 15667777777778999999999 6789999999 7999999 998766
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
.+++
T Consensus 200 ~~~i 203 (225)
T 1mxs_A 200 SSWI 203 (225)
T ss_dssp HHHH
T ss_pred chhh
Confidence 5543
No 243
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=96.53 E-value=0.044 Score=55.78 Aligned_cols=151 Identities=13% Similarity=0.051 Sum_probs=99.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccc----cCCCccccccC---ChHHHHHHHHHHhhccC-
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVA----GHGCFGVSLML---DPKFVGEAMSVIAANTN- 194 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~----r~g~yG~~Ll~---~~~~l~eiv~av~~~~~- 194 (436)
+.-|+...+.+.+++++.+.++.+.+.||..+.+..|.+..... ..+.+...... +++...+.++++|+++|
T Consensus 141 ~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 141 TAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 34566677777899999999998888999999999886542211 01111222222 24566678888888875
Q ss_pred -CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 195 -VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 195 -iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
+.+.+-.--+|+ ..+..++ .+.+++.++.+|- . .+++.+++.+.++.+.. ++||.+.
T Consensus 221 ~~~l~vDan~~~~----~~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~d 278 (421)
T 4hnl_A 221 QFQMLHDVHERLH----PNQAIQF-AKAAEPYQLFFLE----D------------ILPPDQSHWLTQLRSQS-ATPIATG 278 (421)
T ss_dssp SSEEEEECTTCSC----HHHHHHH-HHHHGGGCCSEEE----C------------CSCGGGGGGHHHHHTTC-CCCEEEC
T ss_pred CceEeccccccCC----HHHHHHH-HHHhhhhhhcccc----c------------CCcccchHHHHHHHhcC-CCCeecC
Confidence 444444444453 3344443 5567888887764 1 12333466666776664 8999999
Q ss_pred CCCCCHHHHHHHHHcC-CCeeee
Q 013784 274 GGINTVDEVNAALRKG-AHHVMV 295 (436)
Q Consensus 274 GgI~s~~da~~~l~~G-ad~Vmi 295 (436)
-.+.+..++.++++.| +|.|++
T Consensus 279 E~~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 279 ELFNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECC
T ss_pred cceehhHHHHHHHhcCCceEEEe
Confidence 9999999999999954 787774
No 244
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.47 E-value=0.0042 Score=65.74 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=56.4
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH-----------HHHHHHH
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-----------DEVNAAL 286 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~-----------~da~~~l 286 (436)
+++.+++.|+|.|++-.-++...|. ...+...+.+.++.+.. .+||+..|||.+. +++.+++
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~------~~~~~~~~~i~~i~~~~-~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCP------LKDTPMLEVLKQAAKTV-FVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCC------GGGCHHHHHHHHHTTTC-CSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCcccccc------CCCchHHHHHHHHHhhC-CCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 3566677899999886433311111 00112367777777665 8999999999998 5599999
Q ss_pred HcCCCeeeehHHHHhC
Q 013784 287 RKGAHHVMVGRAAYQN 302 (436)
Q Consensus 287 ~~Gad~VmiGRa~l~~ 302 (436)
+.|||.|.||++++.+
T Consensus 358 ~aGad~V~igt~~~~~ 373 (555)
T 1jvn_A 358 RSGADKVSIGTDAVYA 373 (555)
T ss_dssp HHTCSEEEECHHHHHH
T ss_pred HcCCCEEEECCHHhhC
Confidence 9999999999999884
No 245
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.47 E-value=0.0067 Score=63.48 Aligned_cols=63 Identities=16% Similarity=0.253 Sum_probs=48.1
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
+.++|+|.|.+|... |.. ...++.+..+++.++++||++ |+|.+.+++.++.+.|||+|.+|.
T Consensus 263 ~~~aG~d~v~i~~~~----G~~--------~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 263 LTQAGVDVIVLDSSQ----GNS--------VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHTTCSEEEECCSC----CCS--------HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHcCCCEEEeeccC----Ccc--------hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECC
Confidence 445999999998532 211 112577778877776899986 789999999999999999998853
No 246
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.46 E-value=0.084 Score=50.63 Aligned_cols=156 Identities=12% Similarity=0.100 Sum_probs=90.1
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc-----hhhhhc----c-CCCCCc-EEEEEc-C---CCHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN-----LDRFLA----F-SPEQHP-IVLQIG-G---SNLDNLA 140 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~-----~~~~~~----~-~~~~~p-i~vQL~-g---~~p~~~~ 140 (436)
|.+.-|..+.+++.+.| .+.+.++-..... ..+.+. .+.++. + .....| +++=+- | .+++...
T Consensus 21 ~~tayDa~sA~l~e~aG-~d~ilvGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~ 98 (275)
T 1o66_A 21 MLTAYESSFAALMDDAG-VEMLLVGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAF 98 (275)
T ss_dssp EEECCSHHHHHHHHHTT-CCEEEECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHH
Confidence 56788999999999886 8888776322211 111111 111111 1 113344 444442 3 2688888
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc---------CC----CC
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI---------GV----DD 207 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~---------G~----~~ 207 (436)
+.|..+.++|+++|.|--| +...+.++++++ .++||.--+.+ |+ ..
T Consensus 99 ~na~rl~kaGa~aVklEdg--------------------~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt 157 (275)
T 1o66_A 99 AAAAELMAAGAHMVKLEGG--------------------VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRG 157 (275)
T ss_dssp HHHHHHHHTTCSEEEEECS--------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC----------
T ss_pred HHHHHHHHcCCcEEEECCc--------------------HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeCh
Confidence 8777777799999988643 013344444443 37887633221 11 11
Q ss_pred CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC
Q 013784 208 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 275 (436)
Q Consensus 208 ~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg 275 (436)
+..+++.+. ++.++++|++.|.+.+-. -+...++.+.. ++|+|+-|.
T Consensus 158 -~~a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIGa 204 (275)
T 1o66_A 158 -GKAQALLND-AKAHDDAGAAVVLMECVL------------------AELAKKVTETV-SCPTIGIGA 204 (275)
T ss_dssp --CHHHHHHH-HHHHHHTTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEESS
T ss_pred -HHHHHHHHH-HHHHHHcCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEECC
Confidence 234555554 567789999999986532 24455666765 899998763
No 247
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.38 E-value=0.022 Score=55.45 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=64.2
Q ss_pred HHHHHHHHhhccCC-cEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH
Q 013784 182 VGEAMSVIAANTNV-PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 260 (436)
Q Consensus 182 l~eiv~av~~~~~i-PvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~ 260 (436)
+.+.++++++..+. ++.+- .++++++.+. .++|+|.|-++.. ..+.+.+
T Consensus 195 i~~ai~~~r~~~~~~kI~ve-------v~tlee~~eA-----~~aGaD~I~ld~~------------------~~e~l~~ 244 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVE-------VENLDELDDA-----LKAGADIIMLDNF------------------NTDQMRE 244 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEE-------ESSHHHHHHH-----HHTTCSEEEESSC------------------CHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEE-------eCCHHHHHHH-----HHcCCCEEEECCC------------------CHHHHHH
Confidence 45666666665542 34432 1345554432 2589999988631 1455556
Q ss_pred HHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 261 LLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 261 l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
.++.. .+++|.++||| +.+.+.++.++|+|.+.+|+.....|++
T Consensus 245 ~v~~~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsli~~a~~~ 289 (296)
T 1qap_A 245 AVKRVNGQARLEVSGNV-TAETLREFAETGVDFISVGALTKHVRAL 289 (296)
T ss_dssp HHHTTCTTCCEEECCCS-CHHHHHHHHHTTCSEEECSHHHHEEECC
T ss_pred HHHHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCC
Confidence 65544 26999999999 9999999999999999999977666764
No 248
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=96.29 E-value=0.086 Score=52.88 Aligned_cols=139 Identities=7% Similarity=-0.004 Sum_probs=90.4
Q ss_pred CcEEEEEcCCCHHHHH-HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEe
Q 013784 125 HPIVLQIGGSNLDNLA-KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~-~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKi 201 (436)
-|+...+...+++... ++++.+++.||..+.+..|+. +++.-.+.+++||++++ +++.+..
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 200 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR----------------ELATDLRHTRAIVEALGDRASIRVDV 200 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS----------------CHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC----------------ChHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 3444455555676644 444555557999998876542 34555678888888875 5677776
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-+|+. .+..++ .+.+++.|+.+|. . .+++.+++.+.++.+.. ++||.+...+.+..+
T Consensus 201 N~~~~~----~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 258 (381)
T 3fcp_A 201 NQAWDA----ATGAKG-CRELAAMGVDLIE----Q------------PVSAHDNAALVRLSQQI-ETAILADEAVATAYD 258 (381)
T ss_dssp TTCBCH----HHHHHH-HHHHHHTTCSEEE----C------------CBCTTCHHHHHHHHHHS-SSEEEESTTCCSHHH
T ss_pred CCCCCH----HHHHHH-HHHHhhcCcccee----C------------CCCcccHHHHHHHHHhC-CCCEEECCCcCCHHH
Confidence 667753 333333 4566778888774 1 12233477777777765 899999999999999
Q ss_pred HHHHHH-cCCCeeeehHHHHh
Q 013784 282 VNAALR-KGAHHVMVGRAAYQ 301 (436)
Q Consensus 282 a~~~l~-~Gad~VmiGRa~l~ 301 (436)
+.++++ .++|.|++--+-.+
T Consensus 259 ~~~~~~~~a~d~v~~k~~~~G 279 (381)
T 3fcp_A 259 GYQLAQQGFTGAYALKIAKAG 279 (381)
T ss_dssp HHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHcCCCCEEEecccccC
Confidence 999998 56899987544433
No 249
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.26 E-value=0.055 Score=52.23 Aligned_cols=133 Identities=10% Similarity=0.060 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccccc---CChHHHHHHHHHHhhccCCcEEEEeccCCCCCCc
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLM---LDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll---~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~ 210 (436)
...+.-+.=++.+.+.|+|.||+=+ .||..+. .+.+.+.+-+++|++.++ +..+|+=+-.....+
T Consensus 97 ~~~e~K~~Ea~~Av~~GAdEIDmVi-----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~ 164 (297)
T 4eiv_A 97 GTPDTVSLEAVGALKDGADEIECLI-----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQG 164 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC-----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeee-----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCc
Confidence 3445444455667778999999742 1344444 467888888889988774 445565543222222
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc--------------------CCCcEE
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--------------------FPDLTF 270 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~--------------------~~~iPV 270 (436)
.+.+.. ..+++.++|+|+|--+. |+++. +. .+.+..++.+.+++ -.++-|
T Consensus 165 ~e~i~~-A~~ia~~AGADFVKTST------Gf~~~-gA--T~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgv 234 (297)
T 4eiv_A 165 GDIISR-AAVAALEGGADFLQTSS------GLGAT-HA--TMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGI 234 (297)
T ss_dssp HHHHHH-HHHHHHHHTCSEEECCC------SSSSC-CC--CHHHHHHHHHHHHHHHCC------------------CCEE
T ss_pred HHHHHH-HHHHHHHhCCCEEEcCC------CCCCC-CC--CHHHHHHHHHHHHHHhccccccccccccccccccCCceeE
Confidence 221222 34456679999997542 22110 00 11123333444431 146889
Q ss_pred EEe-CCCCCHHHHHHHHHc
Q 013784 271 TLN-GGINTVDEVNAALRK 288 (436)
Q Consensus 271 Ian-GgI~s~~da~~~l~~ 288 (436)
=++ |||+|.+++.++++.
T Consensus 235 KAs~GGIrt~e~A~~~i~~ 253 (297)
T 4eiv_A 235 KIEVGDVHMAETADFLMQM 253 (297)
T ss_dssp EEECTTCCHHHHHHHHHHH
T ss_pred EecCCCCCCHHHHHHHHHH
Confidence 999 999999999999984
No 250
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=96.15 E-value=0.11 Score=53.15 Aligned_cols=125 Identities=9% Similarity=0.018 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
+.+++.+++.++.+.+.||..+.+..|+ +++.-.+.+++||+++ ++++.+-..-+|+.
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~-----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~--- 258 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA-----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDV--- 258 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS-----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCH---
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH---
Confidence 5589999999988888899999988764 2444566778888876 46677776667753
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc--CCCcEEEEeCCCCCHHHHHHHHH-
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD--FPDLTFTLNGGINTVDEVNAALR- 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~--~~~iPVIanGgI~s~~da~~~l~- 287 (436)
.+..++ .+.+++.++.+|- . .+++.+++...++.+. ..++||.+.-.+.+..++.++++
T Consensus 259 -~~A~~~-~~~L~~~~~~~iE----e------------P~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~ 320 (441)
T 4a35_A 259 -PEAVEW-MSKLAKFKPLWIE----E------------PTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA 320 (441)
T ss_dssp -HHHHHH-HHHHGGGCCSEEE----C------------CSCTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT
T ss_pred -HHHHHH-HHhhcccCccEEe----C------------CCCcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc
Confidence 333343 4566778887764 1 1223336655666554 13799999999999999999998
Q ss_pred cCCCeeee
Q 013784 288 KGAHHVMV 295 (436)
Q Consensus 288 ~Gad~Vmi 295 (436)
..+|.|++
T Consensus 321 ~a~div~~ 328 (441)
T 4a35_A 321 KALQFLQI 328 (441)
T ss_dssp TCCSEECC
T ss_pred CCCCEEEE
Confidence 45888875
No 251
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.15 E-value=0.036 Score=51.03 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=78.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
.|+.+.+ .+.++|+|.|.+|.... .+.+.++++.+++ .|.++.+++-.+++ .+..
T Consensus 68 ip~t~~~---~~~~~Gad~itvh~~~g-----------------~~~l~~~~~~~~~-~g~~~~~~ll~~~t----~~~~ 122 (216)
T 1q6o_A 68 AGKILSR---MCFEANADWVTVICCAD-----------------INTAKGALDVAKE-FNGDVQIELTGYWT----WEQA 122 (216)
T ss_dssp CHHHHHH---HHHHTTCSEEEEETTSC-----------------HHHHHHHHHHHHH-TTCEEEEEECSCCC----HHHH
T ss_pred cHHHHHH---HHHhCCCCEEEEeccCC-----------------HHHHHHHHHHHHH-cCCCceeeeeeCCC----hhhH
Confidence 5776655 56689999999985321 2235566666655 36666554431333 1111
Q ss_pred HHHHHHHhhcCCccEEEEcc-CcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCee
Q 013784 215 CDFIYKVSSLSPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHV 293 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhg-rt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~V 293 (436)
+ .+++.|.+.+.+|- +.....|..+ .+.....+.+... .++||++.|||. ++.+.++++.|||.+
T Consensus 123 -~----~l~~~~~~~~vl~~a~~~~~~G~~g------~~~~i~~lr~~~~--~~~~i~v~GGI~-~~~~~~~~~aGad~i 188 (216)
T 1q6o_A 123 -Q----QWRDAGIGQVVYHRSRDAQAAGVAW------GEADITAIKRLSD--MGFKVTVTGGLA-LEDLPLFKGIPIHVF 188 (216)
T ss_dssp -H----HHHHTTCCEEEEECCHHHHHTTCCC------CHHHHHHHHHHHH--TTCEEEEESSCC-GGGGGGGTTSCCSEE
T ss_pred -H----HHHhcCcHHHHHHHHHHHHhcCCCC------CHHHHHHHHHhcC--CCCcEEEECCcC-hhhHHHHHHcCCCEE
Confidence 1 12345777777653 2221123321 1112333333332 268999999997 788888889999999
Q ss_pred eehHHHHhCCc
Q 013784 294 MVGRAAYQNPW 304 (436)
Q Consensus 294 miGRa~l~~P~ 304 (436)
.+||+++..++
T Consensus 189 vvG~~I~~a~d 199 (216)
T 1q6o_A 189 IAGRSIRDAAS 199 (216)
T ss_dssp EESHHHHTSSC
T ss_pred EEeehhcCCCC
Confidence 99999987654
No 252
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.12 E-value=0.017 Score=55.57 Aligned_cols=92 Identities=13% Similarity=0.211 Sum_probs=62.5
Q ss_pred HHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH
Q 013784 183 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 260 (436)
Q Consensus 183 ~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~ 260 (436)
.+.++++++..+ .++.+-+ ++++++.+. + ++|+|.|-++.-. .+.+.+
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev-------~tlee~~~A----~-~aGaD~I~ld~~~------------------~~~l~~ 218 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC-------ESFEEAKNA----M-NAGADIVMCDNLS------------------VLETKE 218 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE-------SSHHHHHHH----H-HHTCSEEEEETCC------------------HHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEc-------CCHHHHHHH----H-HcCCCEEEECCCC------------------HHHHHH
Confidence 456677777654 3444421 344554432 2 4799999886311 223332
Q ss_pred ----HHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 261 ----LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 261 ----l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+...++++||.++||| +.+.+.++.++|+|++.+|+.....|++
T Consensus 219 ~v~~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 219 IAAYRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISVGALIHQATFI 266 (273)
T ss_dssp HHHHHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHHTCCCC
T ss_pred HHHHhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhcCCCCC
Confidence 2223567999999999 8999999999999999999998877875
No 253
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.11 E-value=0.013 Score=57.19 Aligned_cols=118 Identities=14% Similarity=0.129 Sum_probs=71.8
Q ss_pred HHHHHHHHCCCCEEEe--cCCCCCCccccCCCccc-cccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHH
Q 013784 141 KATELANAYNYDEINL--NCGCPSPKVAGHGCFGV-SLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDF 217 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdL--N~gcP~~~v~r~g~yG~-~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~ 217 (436)
+.|+.+++.|++.|.+ |..|.... +|+ ....+++.+.+ +++.+++||.+|.+.+. ..+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~------~~g~~R~~~~~~i~~----i~~~v~iPvl~k~~i~~-----ide---- 92 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRN------TDGVARSVDPLKIEE----IRKCISINVLAKVRIGH-----FVE---- 92 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----------CCCCCCCCCHHHHHH----HHTTCCSEEEEEEETTC-----HHH----
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchh------cCCcccCCCHHHHHH----HHHhcCCCEEEeccCCc-----HHH----
Confidence 4568888899998765 44455432 233 44456665554 56677999999998865 222
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.++++++|+|.|.... +....+ .+.. +.+...+++|++ ++.+.+++.++++.|+|.|.+.
T Consensus 93 -~qil~aaGAD~Id~s~------~~~~~~--li~~--------i~~~~~g~~vvv--~v~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 93 -AQILEELKVDMLDESE------VLTMAD--EYNH--------INKHKFKTPFVC--GCTNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp -HHHHHHTTCSEEEEET------TSCCSC--SSCC--------CCGGGCSSCEEE--EESSHHHHHHHHHHTCSEEEEC
T ss_pred -HHHHHHcCCCEEEcCC------CCCHHH--HHHH--------HHhcCCCCeEEE--EeCCHHHHHHHHhCCCCEEEEC
Confidence 2344579999993211 111111 1111 112123677776 7999999999999999988775
No 254
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.10 E-value=0.092 Score=49.93 Aligned_cols=190 Identities=14% Similarity=0.084 Sum_probs=112.7
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEecc--ccchhhhhccc---chhhhhc-----cCCCCCcEEEEE---cCCCHHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEM--LAAETIIYQQG---NLDRFLA-----FSPEQHPIVLQI---GGSNLDNLAKA 142 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~tem--v~~~~l~~~~~---~~~~~~~-----~~~~~~pi~vQL---~g~~p~~~~~a 142 (436)
|.++-|....+++.+.| ...+++.- ++ ..+.+.+- ..+.++. ....+.|+++=+ +|..+ .+.
T Consensus 24 ~~~ayD~~sA~~~~~aG-~dai~vg~~s~a-~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~---~~~ 98 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAG-FSGLTIGSHPVA-DATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP---ADL 98 (255)
T ss_dssp CCEESSHHHHHHHHHTT-CSCEEECHHHHH-HHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH---HHH
T ss_pred EecCcCHHHHHHHHHcC-CCEEEEChHHHH-HhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH---HHH
Confidence 67888999999998886 77776663 33 12221110 0111111 011236887766 45566 667
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc---cCCcEEEEeccC-----CCC-CCcHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN---TNVPVSVKCRIG-----VDD-HDSYNQ 213 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~---~~iPvsvKiR~G-----~~~-~~~~~~ 213 (436)
++.+.++|+++|.|--+... . |..+ -..+...+-+++++++ .|+|+.|--|.+ ..+ .+..++
T Consensus 99 ~~~l~~aGa~gv~iEd~~~~-------~-~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ 169 (255)
T 2qiw_A 99 IAQILEAGAVGINVEDVVHS-------E-GKRV-REAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVE 169 (255)
T ss_dssp HHHHHHTTCCEEEECSEEGG-------G-TTEE-CCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHH
T ss_pred HHHHHHcCCcEEEECCCCCC-------C-CCcc-cCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHH
Confidence 77777899999999765411 1 2222 3445555666666554 278865555543 221 123566
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe--CCCCCH-HHHHHHHHcCC
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN--GGINTV-DEVNAALRKGA 290 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan--GgI~s~-~da~~~l~~Ga 290 (436)
+.+. ++.++++|+|.|.+++-.. .+.+.++.+.+ ++|+..+ ++-.++ -...++-+.|+
T Consensus 170 ai~r-a~a~~eAGAd~i~~e~~~~-----------------~~~~~~i~~~~-~~P~n~~~~~~~~~p~~~~~eL~~lGv 230 (255)
T 2qiw_A 170 AIKR-IKLMEQAGARSVYPVGLST-----------------AEQVERLVDAV-SVPVNITAHPVDGHGAGDLATLAGLGV 230 (255)
T ss_dssp HHHH-HHHHHHHTCSEEEECCCCS-----------------HHHHHHHHTTC-SSCBEEECBTTTBBTTBCHHHHHHTTC
T ss_pred HHHH-HHHHHHcCCcEEEEcCCCC-----------------HHHHHHHHHhC-CCCEEEEecCCCCCCCCCHHHHHHcCC
Confidence 6654 4567789999999976321 45666777765 7888776 332111 23455666899
Q ss_pred CeeeehHH
Q 013784 291 HHVMVGRA 298 (436)
Q Consensus 291 d~VmiGRa 298 (436)
..|..|-.
T Consensus 231 ~~v~~~~~ 238 (255)
T 2qiw_A 231 RRVTFGPL 238 (255)
T ss_dssp CEEECTTH
T ss_pred CEEEEHHH
Confidence 99998876
No 255
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.10 E-value=0.0028 Score=57.78 Aligned_cols=65 Identities=17% Similarity=0.177 Sum_probs=50.3
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHH
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 300 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l 300 (436)
.+++...|++.+-. |.. -+.+.++.+.. ++|||+.|+|.|.+|+.++++.||++|..++..|
T Consensus 122 ~i~~~~PD~iEiLP------Gi~-----------p~iI~~i~~~~-~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 122 LIQKVQPDCIELLP------GII-----------PEQVQKMTQKL-HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp HHHHHCCSEEEEEC------TTC-----------HHHHHHHHHHH-CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGG
T ss_pred HHhhcCCCEEEECC------chh-----------HHHHHHHHHhc-CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHH
Confidence 34556678886642 211 24566776664 9999999999999999999999999999998877
Q ss_pred hCC
Q 013784 301 QNP 303 (436)
Q Consensus 301 ~~P 303 (436)
++.
T Consensus 184 W~~ 186 (192)
T 3kts_A 184 WEG 186 (192)
T ss_dssp GTT
T ss_pred hCc
Confidence 664
No 256
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.07 E-value=0.025 Score=53.23 Aligned_cols=137 Identities=9% Similarity=0.041 Sum_probs=83.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--------CCcEEE
Q 013784 128 VLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--------NVPVSV 199 (436)
Q Consensus 128 ~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--------~iPvsv 199 (436)
-+-|...+|+.+. +.+.++|+|+|-+|..... . +.++++.+++.. |.-+.+
T Consensus 73 DvhLMv~~p~~~i---~~~~~aGAd~itvH~ea~~---------------~---~~~~i~~i~~~~~~~~~~~~g~~~gv 131 (237)
T 3cu2_A 73 DVHLMVRNQLEVA---KAVVANGANLVTLQLEQYH---------------D---FALTIEWLAKQKTTYANQVYPVLIGA 131 (237)
T ss_dssp EEEEECSCHHHHH---HHHHHTTCSEEEEETTCTT---------------S---HHHHHHHHTTCEEEETTEEEECEEEE
T ss_pred CeEEEEECHHHHH---HHHHHcCCCEEEEecCCcc---------------c---HHHHHHHHHhcccccccccCCceEEE
Confidence 7777788997655 4556789999999865421 1 446666666541 333333
Q ss_pred EeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCC
Q 013784 200 KCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGG 275 (436)
Q Consensus 200 KiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGg 275 (436)
-+..+ .. .+.+ ..++ .++|.|.+.+... |.++. ...+..++.+.++.+.. .++||.+-||
T Consensus 132 ~l~p~--Tp--~~~l----~~~l--~~~D~vlvMsv~p---gfggq---~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGG 195 (237)
T 3cu2_A 132 CLCPE--TP--ISEL----EPYL--DQIDVIQLLTLDP---RNGTK---YPSELILDRVIQVEKRLGNRRVEKLINIDGS 195 (237)
T ss_dssp EECTT--SC--GGGG----TTTT--TTCSEEEEESEET---TTTEE---CCHHHHHHHHHHHHHHHGGGGGGCEEEEESS
T ss_pred EEeCC--Ch--HHHH----HHHh--hcCceeeeeeecc---CcCCe---ecChhHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 33222 11 1111 1122 4799997644443 22211 11122244444444332 2589999999
Q ss_pred CCCHHHHHHHHH--cCCCeeeehHHHHhC
Q 013784 276 INTVDEVNAALR--KGAHHVMVGRAAYQN 302 (436)
Q Consensus 276 I~s~~da~~~l~--~Gad~VmiGRa~l~~ 302 (436)
|. .+.+..+.+ .|||.+.+|++++..
T Consensus 196 I~-~~~~~~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 196 MT-LELAKYFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp CC-HHHHHHHHHSSSCCCCEEECGGGGSS
T ss_pred cC-HHHHHHHHHhCCCCcEEEEeeHHhCC
Confidence 95 899999999 999999999999875
No 257
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.03 E-value=0.067 Score=52.77 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=79.9
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccc-cCChHHHHHHHHHHhhccCCcEEEEe--cc-CCCCCCc--H----
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSL-MLDPKFVGEAMSVIAANTNVPVSVKC--RI-GVDDHDS--Y---- 211 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~L-l~~~~~l~eiv~av~~~~~iPvsvKi--R~-G~~~~~~--~---- 211 (436)
.++.+.+.|+|+|-+..-.-. +. ...+ ..+.+.+.++.++.+ ..|+|+.+-+ +. +..+..+ +
T Consensus 115 sve~a~~~GADAVk~lv~~g~------d~-~~e~~~~q~~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDV------DG-DPQVNVQKQAYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECT------TS-CHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred CHHHHHHcCCCEEEEEEEcCC------Cc-hHHHHHHHHHHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccC
Confidence 466788999999877642211 10 0000 012234444544443 3489977633 22 2222111 1
Q ss_pred HHHHHHHHHHh--hcCCccEEEEcc-Ccc-cccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEE-EeCCCCCHHHHHHHH
Q 013784 212 NQLCDFIYKVS--SLSPTRHFIIHS-RKA-LLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT-LNGGINTVDEVNAAL 286 (436)
Q Consensus 212 ~~~~~~la~~~--e~~Gvd~I~vhg-rt~-~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVI-anGgI~s~~da~~~l 286 (436)
.+.....++.. .+.|+|.+-+-- ... ...|.+..+.-+......+.+.++++.. .+|+| .+||+ +.+++.+.+
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~-~~P~v~lsgG~-~~~~fl~~v 264 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST-DLPYIYLSAGV-SAELFQETL 264 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC-SSCEEEECTTC-CHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC-CCCEEEECCCC-CHHHHHHHH
Confidence 22233345565 457999998841 111 1122221110000000123466666654 89965 79998 566777666
Q ss_pred H----cCC--CeeeehHHHHhCC
Q 013784 287 R----KGA--HHVMVGRAAYQNP 303 (436)
Q Consensus 287 ~----~Ga--d~VmiGRa~l~~P 303 (436)
+ .|| .||.+||....+.
T Consensus 265 ~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 265 VFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHcCCCcceEEeeHHHHHhh
Confidence 4 799 9999999987663
No 258
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.00 E-value=0.087 Score=50.28 Aligned_cols=156 Identities=8% Similarity=0.039 Sum_probs=89.7
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc-----hhhhhc----c-CCCCCc-EEEEEc-CC--CHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN-----LDRFLA----F-SPEQHP-IVLQIG-GS--NLDNLAK 141 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~-----~~~~~~----~-~~~~~p-i~vQL~-g~--~p~~~~~ 141 (436)
|.+.-|..+.+++.+.| .+.++++-.... ...+.+. .+.++. + .....| +++=+- |+ +++...+
T Consensus 21 ~~tayD~~sA~l~e~aG-~d~ilvGdsl~~-~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~ 98 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEG-LNVMLVGDSLGM-TVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFE 98 (264)
T ss_dssp EEECCSHHHHHHHHHHT-CCEEEECTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECHHHHH-HHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHH
Confidence 56788999999998886 888888632221 1112211 111111 1 113344 444442 21 7887777
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---------ccCCCCC----
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---------RIGVDDH---- 208 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---------R~G~~~~---- 208 (436)
.|..+.++|+++|.|--| +...+.++++++ .++||.--+ .-|+...
T Consensus 99 ~a~rl~kaGa~aVklEgg--------------------~e~~~~I~al~~-agipV~gHiGLtPq~v~~~ggf~v~grt~ 157 (264)
T 1m3u_A 99 NAATVMRAGANMVKIEGG--------------------EWLVETVQMLTE-RAVPVCGHLGLTPQSVNIFGGYKVQGRGD 157 (264)
T ss_dssp HHHHHHHTTCSEEECCCS--------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHTSSCCCCCSH
T ss_pred HHHHHHHcCCCEEEECCc--------------------HHHHHHHHHHHH-CCCCeEeeecCCceeecccCCeEEEeCCH
Confidence 777777799999977643 113344444444 378875222 1122211
Q ss_pred CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 209 DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 209 ~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
...+++.+. ++.++++|++.|.+.+-. -+...++.+.. ++|+|+-|
T Consensus 158 ~~a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~it~~l-~iP~igIG 203 (264)
T 1m3u_A 158 EAGDQLLSD-ALALEAAGAQLLVLECVP------------------VELAKRITEAL-AIPVIGIG 203 (264)
T ss_dssp HHHHHHHHH-HHHHHHHTCCEEEEESCC------------------HHHHHHHHHHC-SSCEEEES
T ss_pred HHHHHHHHH-HHHHHHCCCcEEEEecCC------------------HHHHHHHHHhC-CCCEEEeC
Confidence 123455544 567788999999997532 24455666665 89999876
No 259
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.93 E-value=0.027 Score=53.49 Aligned_cols=72 Identities=11% Similarity=-0.024 Sum_probs=56.2
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++..+++|+++|.+-.-....+| ..+.+..+.+.+ ++||+.-+.|.|..++.++++.|||+|.++..
T Consensus 71 A~~~~~~GA~~isvlt~~~~f~G------------~~~~l~~i~~~v-~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~ 137 (254)
T 1vc4_A 71 ALAYARGGARAVSVLTEPHRFGG------------SLLDLKRVREAV-DLPLLRKDFVVDPFMLEEARAFGASAALLIVA 137 (254)
T ss_dssp HHHHHHTTCSEEEEECCCSSSCC------------CHHHHHHHHHHC-CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHH
T ss_pred HHHHHHcCCCEEEEecchhhhcc------------CHHHHHHHHHhc-CCCEEECCcCCCHHHHHHHHHcCCCEEEECcc
Confidence 55667899999998432222222 156666776665 99999999999999999999999999999999
Q ss_pred HHhCCc
Q 013784 299 AYQNPW 304 (436)
Q Consensus 299 ~l~~P~ 304 (436)
.+. ..
T Consensus 138 ~l~-~~ 142 (254)
T 1vc4_A 138 LLG-EL 142 (254)
T ss_dssp HHG-GG
T ss_pred chH-HH
Confidence 998 44
No 260
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=95.88 E-value=0.22 Score=49.64 Aligned_cols=134 Identities=13% Similarity=0.129 Sum_probs=90.7
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
-|+...+...+++.+++.++.+.+.||..+.+..|.. +++.-.+.+++||+.+ +.++.+-..-
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~----------------~~~~d~~~v~avr~~~~~~~l~vDaN~ 196 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV----------------DVAYDLARLRAIHQAAPTAPLIVDGNC 196 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS----------------CHHHHHHHHHHHHHHSSSCCEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 3455567778999999888887788999998876532 3555667777888766 3445444444
Q ss_pred CCCCCCcHHHHHHHHHHHh--hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~--e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
+|+ ..+..++ .+.+ ++.++.+|. . .+++.+++...++.+.. ++||.+.-.+.+..+
T Consensus 197 ~~~----~~~A~~~-~~~L~~~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 254 (365)
T 3ik4_A 197 GYD----VERALAF-CAACKAESIPMVLFE----Q------------PLPREDWAGMAQVTAQS-GFAVAADESARSAHD 254 (365)
T ss_dssp CCC----HHHHHHH-HHHHHHTTCCEEEEE----C------------CSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHH
T ss_pred CCC----HHHHHHH-HHHHhhCCCCceEEE----C------------CCCcccHHHHHHHHhhC-CCCEEECCCCCCHHH
Confidence 554 3344443 4455 556666655 1 12223477777777765 899999999999999
Q ss_pred HHHHHH-cCCCeeeeh
Q 013784 282 VNAALR-KGAHHVMVG 296 (436)
Q Consensus 282 a~~~l~-~Gad~VmiG 296 (436)
+.++++ ..+|.|++=
T Consensus 255 ~~~~i~~~a~d~v~ik 270 (365)
T 3ik4_A 255 VLRIAREGTASVINIK 270 (365)
T ss_dssp HHHHHHHTCCSEEEEC
T ss_pred HHHHHHhCCCCEEEEc
Confidence 999998 458888753
No 261
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.84 E-value=0.099 Score=50.30 Aligned_cols=120 Identities=5% Similarity=-0.004 Sum_probs=71.6
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+ +-+...|. -.|++++++|+|.|=. |.....+. . +|-..+.-..+.+...+++|++.++.|+.+ ..+
T Consensus 33 g~~i-~~~tayDa----~sA~l~e~aG~d~ilv--GdSl~~~~-l-G~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~ 102 (281)
T 1oy0_A 33 GHKW-AMLTAYDY----STARIFDEAGIPVLLV--GDSAANVV-Y-GYDTTVPISIDELIPLVRGVVRGAPHALVV-ADL 102 (281)
T ss_dssp TCCE-EEEECCSH----HHHHHHHTTTCCEEEE--CTTHHHHT-T-CCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EEC
T ss_pred CCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-c-CCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EEC
Confidence 4443 44555555 4788899999999843 32221111 1 122233344555666777777777777665 666
Q ss_pred CCCCC-CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEE
Q 013784 204 GVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 271 (436)
Q Consensus 204 G~~~~-~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVI 271 (436)
++-.. .+.++..+...++++++|+++|.+-|... -.+.++.+++. .|||+
T Consensus 103 pfgsy~~s~~~a~~na~rl~~eaGa~aVklEdg~e----------------~~~~I~al~~a--gIpV~ 153 (281)
T 1oy0_A 103 PFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGER----------------VAEQIACLTAA--GIPVM 153 (281)
T ss_dssp CTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSGG----------------GHHHHHHHHHH--TCCEE
T ss_pred CCCcccCCHHHHHHHHHHHHHHhCCeEEEECCcHH----------------HHHHHHHHHHC--CCCEE
Confidence 55322 34556656567788889999999976421 14455566554 68877
No 262
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=95.75 E-value=0.16 Score=46.63 Aligned_cols=178 Identities=11% Similarity=0.070 Sum_probs=98.9
Q ss_pred CCCChHHHHHHHHHcCCCcEEEeccc--cchhhhhcccchhhhhccCCCCCcEEEEEcCCC-HHHHHHHHHHHHHCCCCE
Q 013784 77 MDWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN-LDNLAKATELANAYNYDE 153 (436)
Q Consensus 77 agvtd~~fr~~~~~~Gg~gl~~temv--~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~ 153 (436)
+|.|+..=..++.++| ++.+.--+. ++..+. ......+...-+ .....|-+|-+. ++ +..+++++.+.|.
T Consensus 7 CGit~~eda~~a~~~G-aD~iGfif~~~SpR~V~--~~~a~~i~~~~~-~~~~~VgVfvn~~~~---~i~~~~~~~~ld~ 79 (205)
T 1nsj_A 7 CGITNLEDALFSVESG-ADAVGFVFYPKSKRYIS--PEDARRISVELP-PFVFRVGVFVNEEPE---KILDVASYVQLNA 79 (205)
T ss_dssp CCCCSHHHHHHHHHHT-CSEEEEECCTTCTTBCC--HHHHHHHHHHSC-SSSEEEEEESSCCHH---HHHHHHHHHTCSE
T ss_pred CCCCcHHHHHHHHHcC-CCEEEEEecCCCCCcCC--HHHHHHHHHhCC-CCCCEEEEEeCCCHH---HHHHHHHhhCCCE
Confidence 6889988888888886 665543332 111111 111222322111 123445556554 44 3455666779999
Q ss_pred EEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEc
Q 013784 154 INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 154 IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh 233 (436)
|+||. . ..++.+.++ ++ ++|+.--++.. + ..++. .. ....+|++.+.
T Consensus 80 vQLHG-----------~------e~~~~~~~l----~~--~~~vika~~v~--~---~~~l~----~~-~~~~~d~~LlD 126 (205)
T 1nsj_A 80 VQLHG-----------E------EPIELCRKI----AE--RILVIKAVGVS--N---ERDME----RA-LNYREFPILLD 126 (205)
T ss_dssp EEECS-----------C------CCHHHHHHH----HT--TSEEEEEEEES--S---HHHHH----HH-GGGTTSCEEEE
T ss_pred EEECC-----------C------CCHHHHHHH----hc--CCCEEEEEEcC--C---HHHHH----HH-HHcCCCEEEEC
Confidence 99992 1 344444433 22 36665445542 1 12221 11 22338998886
Q ss_pred cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCeeeehHHHHhCCc
Q 013784 234 SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 234 grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~VmiGRa~l~~P~ 304 (436)
.....++|.+.. .+|..+..+. . .+.|++.+||+ +++.+.++++ .++.||=+.+|.-..|-
T Consensus 127 ~~~~~~GGtG~~-------fdw~~l~~~~-~-~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG 188 (205)
T 1nsj_A 127 TKTPEYGGSGKT-------FDWSLILPYR-D-RFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPG 188 (205)
T ss_dssp ESCSSSSSCCSC-------CCGGGTGGGG-G-GSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETT
T ss_pred CCCCCCCCCCCc-------cCHHHHHhhh-c-CCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCC
Confidence 543323343321 2254433221 1 26799999999 7889988877 79999999999875554
No 263
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=95.68 E-value=0.1 Score=52.90 Aligned_cols=127 Identities=11% Similarity=-0.071 Sum_probs=83.4
Q ss_pred HHHHHHHHCCCCEEEecCCCCCC-ccccCCCccccc-cCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSP-KVAGHGCFGVSL-MLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCD 216 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~-~v~r~g~yG~~L-l~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~ 216 (436)
+.++.+.+.||..+-++...+.. |+ |... ..+++...+.+++||++++ +++.+-..-+|+ .++..+
T Consensus 162 ~~a~~~~~~G~~~~K~~~~~~~~~K~------G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~----~~~A~~ 231 (410)
T 3dip_A 162 VLAESLVAEGYAAMKIWPFDDFASIT------PHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWG----THAAAR 231 (410)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTC------TTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBC----HHHHHH
T ss_pred HHHHHHHHcCCCEEEECCccCccccc------cCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC----HHHHHH
Confidence 44555667899999996221110 11 2110 0235667788999999874 667766555564 334444
Q ss_pred HHHHHhhcCCccEEEEccCcccccCCCCCCCCC-CCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCeee
Q 013784 217 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRT-IPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHVM 294 (436)
Q Consensus 217 ~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~-i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~Vm 294 (436)
+++.+++.|+++|.- . +++.+++...++.+.. ++||++.+.+.+.+++.++++. .+|.|+
T Consensus 232 -~~~~L~~~~i~~iEq----------------P~~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 293 (410)
T 3dip_A 232 -ICNALADYGVLWVED----------------PIAKMDNIPAVADLRRQT-RAPICGGENLAGTRRFHEMLCADAIDFVM 293 (410)
T ss_dssp -HHHHGGGGTCSEEEC----------------CBSCTTCHHHHHHHHHHH-CCCEEECTTCCSHHHHHHHHHTTCCSEEE
T ss_pred -HHHHHHhcCCCEEEC----------------CCCCcccHHHHHHHHhhC-CCCEEecCCcCCHHHHHHHHHcCCCCeEe
Confidence 355678889988861 1 1222366666777665 8999999999999999999995 488888
Q ss_pred e
Q 013784 295 V 295 (436)
Q Consensus 295 i 295 (436)
+
T Consensus 294 ~ 294 (410)
T 3dip_A 294 L 294 (410)
T ss_dssp E
T ss_pred e
Confidence 5
No 264
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=95.64 E-value=0.023 Score=52.72 Aligned_cols=131 Identities=13% Similarity=0.127 Sum_probs=75.9
Q ss_pred HHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhh
Q 013784 144 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSS 223 (436)
Q Consensus 144 ~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e 223 (436)
..+.++|+|+|-|... - |. ...+.+.+.++..++. |+.+.+-+. +.++. . .+.
T Consensus 76 ~~~~~~Gad~Vll~~s--e----r~--------l~~~e~~~~~~~a~~~-Gl~~iv~v~-------~~~e~----~-~~~ 128 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHS--E----KR--------MLLADIEAVINKCKNL-GLETIVCTN-------NINTS----K-AVA 128 (219)
T ss_dssp HHHHHHTCCEEEESBT--T----BC--------CBHHHHHHHHHHHHHH-TCEEEEEES-------SSHHH----H-HHT
T ss_pred HHHHHcCCCEEEECCc--c----cc--------CCHHHHHHHHHHHHHC-CCeEEEEeC-------CchHH----H-HHH
Confidence 5677889999988321 0 00 1112356666665443 554333322 11121 1 224
Q ss_pred cCCccEEEEccCcccccCCCCCC-CCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 224 LSPTRHFIIHSRKALLNGISPAE-NRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 224 ~~Gvd~I~vhgrt~~~~G~~~~~-~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
+.|.+.|.++.|... |.+ .. ... .+...+.+.++++..+ ++||++-|||.+++++..+.+.|+|+|.||++++.
T Consensus 129 ~~~~~~i~~~~~~~i--GtG-~~~~t~-~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 129 ALSPDCIAVEPPELI--GTG-IPVSKA-NPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp TTCCSEEEECCCC------------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred hCCCCEEEEEecccc--ccC-CCCccC-CHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 568888888887642 211 00 000 0111233334444433 79999999999999999998899999999999998
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
-++.
T Consensus 205 ~~d~ 208 (219)
T 2h6r_A 205 AKNV 208 (219)
T ss_dssp CSSH
T ss_pred cccH
Confidence 7773
No 265
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.60 E-value=0.39 Score=43.90 Aligned_cols=174 Identities=12% Similarity=0.102 Sum_probs=99.9
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccc--cchhhhhcccchhhhhc-cCCCCCcEEEEEcCCC-HHHHHHHHHHHHHCCC
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEML--AAETIIYQQGNLDRFLA-FSPEQHPIVLQIGGSN-LDNLAKATELANAYNY 151 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv--~~~~l~~~~~~~~~~~~-~~~~~~pi~vQL~g~~-p~~~~~aA~~~~~~G~ 151 (436)
.+|.|+..=..++.++| ++.+.--+. ++..+. ......+.. +.+. ...|-+|-+. ++ +..+++++.+.
T Consensus 5 ICGit~~eda~~a~~~G-aD~iGfif~~~SpR~V~--~~~a~~i~~~~~~~--~~~VgVfvn~~~~---~i~~~~~~~~l 76 (203)
T 1v5x_A 5 ICGITRLEDALLAEALG-AFALGFVLAPGSRRRIA--PEAARAIGEALGPF--VVRVGVFRDQPPE---EVLRLMEEARL 76 (203)
T ss_dssp ECCCCCHHHHHHHHHHT-CSEEEEECCTTCTTBCC--HHHHHHHHHHSCSS--SEEEEEESSCCHH---HHHHHHHHTTC
T ss_pred EcCCCcHHHHHHHHHcC-CCEEEEEecCCCCCcCC--HHHHHHHHHhCCCC--CCEEEEEeCCCHH---HHHHHHHhhCC
Confidence 36888888888888875 665543332 111111 111222322 2222 3445556554 44 45566778899
Q ss_pred CEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEE
Q 013784 152 DEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFI 231 (436)
Q Consensus 152 d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~ 231 (436)
|.|+||. . ..++.+.++ .. ++|+.--++..-. ... . +....+|++.
T Consensus 77 d~vQLHG-----------~------e~~~~~~~l----~~--~~~vika~~v~~~--~~l-~--------~~~~~~d~~L 122 (203)
T 1v5x_A 77 QVAQLHG-----------E------EPPEWAEAV----GR--FYPVIKAFPLEGP--ARP-E--------WADYPAQALL 122 (203)
T ss_dssp SEEEECS-----------C------CCHHHHHHH----TT--TSCEEEEEECSSS--CCG-G--------GGGSSCSEEE
T ss_pred CEEEECC-----------C------CCHHHHHHh----cc--CCCEEEEEEcCCh--Hhh-h--------hhhcCCCEEE
Confidence 9999992 1 345544443 11 5777655665321 112 1 1223389988
Q ss_pred EccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 232 IHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 232 vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+.... +|.+. +.+|..+..+.. .+.|++.+||+ +++.+.+++..++.+|=+.+|.-..|-
T Consensus 123 lD~~~---gGtG~-------~fdW~~l~~~~~--~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGvE~~pG 182 (203)
T 1v5x_A 123 LDGKR---PGSGE-------AYPRAWAKPLLA--TGRRVILAGGI-APENLEEVLALRPYALDLASGVEEAPG 182 (203)
T ss_dssp EECSS---TTSCC-------CCCGGGGHHHHH--TTSCEEECSSC-CSTTHHHHHHHCCSEEEESGGGEEETT
T ss_pred EcCCC---CCCCC-------ccCHHHHHhhhc--cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCCceecCCC
Confidence 86432 23321 123665554222 26799999999 778887777769999999999865554
No 266
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.60 E-value=0.76 Score=42.77 Aligned_cols=179 Identities=7% Similarity=0.029 Sum_probs=97.7
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcc--cchhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCE
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQ--GNLDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDE 153 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~--~~~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~ 153 (436)
.+|.|+..=..++ +.| ++.+ +++-...-.+.. +...++.+. ....++.+.++.+ +++ .+..+++.+.|.
T Consensus 25 ICGit~~ed~~a~-~~g-aD~i--GfIf~~~SpR~V~~~~A~~i~~~-~~~~~~~v~v~v~-~~e---i~~~i~~~~ld~ 95 (228)
T 4aaj_A 25 ICGIKSLEELEIV-EKH-ADAT--GVVVNSNSKRRIPLEKAREIIEN-SAIPVFLVSTMVG-FSE---WAMAIERTGAQY 95 (228)
T ss_dssp ECCCCSHHHHHHH-HTT-CSEE--EEECSSSSTTBCCHHHHHHHHHH-CSSCEEEEECCCC-HHH---HHHHHHHHTCSE
T ss_pred ECCCCcHHHHHHH-HcC-CCEE--EEEecCCCCCCCCHHHHHHHHHh-hCCCCEEEeccCc-hHH---HHHHHHhccchh
Confidence 3688877755544 564 6654 344322111111 111222221 1234566666654 554 445567789999
Q ss_pred EEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEc
Q 013784 154 INLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 154 IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vh 233 (436)
|+||. . ..|+.+.+ +++.+++|+.--++.........++....+.. .....+|++-+-
T Consensus 96 vQLHG-----------~------E~~~~~~~----l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~-~~~~~~d~~LlD 153 (228)
T 4aaj_A 96 IQVHS-----------N------ALPQTIDT----LKKEFGVFVMKAFRVPTISKNPEEDANRLLSE-ISRYNADMVLLD 153 (228)
T ss_dssp EEECS-----------C------CCHHHHHH----HHHHHCCEEEEEEECCSSCSCHHHHHHHHHHH-HHHSCCSEEEEE
T ss_pred eeccc-----------c------cCHHHHHH----HhhccCceEEEEEEecccccchhhhHHHHHHH-HhccCCCEEccC
Confidence 99982 2 34555444 44455778755456543222112222222222 234678988775
Q ss_pred cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCCeeeehHHHH
Q 013784 234 SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAHHVMVGRAAY 300 (436)
Q Consensus 234 grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad~VmiGRa~l 300 (436)
.. +|.+. .-+|..+..+.. +.|+|.+||+ +++.+.++++ .+..+|=+.+|.-
T Consensus 154 s~----GGtG~-------~fDW~~~~~~~~---~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGVE 206 (228)
T 4aaj_A 154 TG----AGSGK-------LHDLRVSSLVAR---KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSSGVE 206 (228)
T ss_dssp C------------------CCCHHHHHHHH---HSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGE
T ss_pred CC----CCCcC-------cCChHHHHHhhh---cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCCCCC
Confidence 31 23321 123776665544 4689999999 7899999887 7888888888875
No 267
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.53 E-value=0.06 Score=49.98 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=82.0
Q ss_pred CCcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCc--EEEE
Q 013784 124 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP--VSVK 200 (436)
Q Consensus 124 ~~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iP--vsvK 200 (436)
+.++++=+- .-.|+.+.++ +.++|+|.+.+|..+. .+.+.+.++++++.-..| +.|-
T Consensus 58 ~~~iflDlKl~Dip~t~~~~---~~~~Gad~vtVH~~~g-----------------~~~l~~a~~~~~~~g~~~~~~~Vt 117 (221)
T 3exr_A 58 DKIIVADTKCADAGGTVAKN---NAVRGADWMTCICSAT-----------------IPTMKAARKAIEDINPDKGEIQVE 117 (221)
T ss_dssp TSEEEEEEEECSCHHHHHHH---HHTTTCSEEEEETTSC-----------------HHHHHHHHHHHHHHCTTTCEEEEE
T ss_pred CCcEEEEEEeeccHHHHHHH---HHHcCCCEEEEeccCC-----------------HHHHHHHHHHHHhcCCCcceEEEE
Confidence 345555443 2457776655 5778999999986322 233556666665532122 2222
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEcc-CcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHS-RKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhg-rt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
+-..+ +.+++.+ + .+.|++.+.+|- +.+...|... ++.....+++... .+++|...||| ++
T Consensus 118 ~lts~----~~~~~~~----~-~~~~~~~~v~~~a~~~~~~Gvv~------s~~e~~~ir~~~~--~~~~i~v~gGI-~~ 179 (221)
T 3exr_A 118 LYGDW----TYDQAQQ----W-LDAGISQAIYHQSRDALLAGETW------GEKDLNKVKKLIE--MGFRVSVTGGL-SV 179 (221)
T ss_dssp CCSSC----CHHHHHH----H-HHTTCCEEEEECCHHHHHHTCCC------CHHHHHHHHHHHH--HTCEEEEESSC-CG
T ss_pred EcCCC----CHHHHHH----H-HcCCHHHHHHHHHHhcCCCcccc------CHHHHHHHHHhhc--CCceEEEECCC-CH
Confidence 22211 2333222 2 247898888873 3222223210 1111333333332 26889999999 67
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+++..+.+.|||.+.+||++...++
T Consensus 180 ~~~~~~~~aGad~~VvG~~I~~a~d 204 (221)
T 3exr_A 180 DTLKLFEGVDVFTFIAGRGITEAKN 204 (221)
T ss_dssp GGGGGGTTCCCSEEEECHHHHTSSS
T ss_pred HHHHHHHHCCCCEEEECchhhCCCC
Confidence 7888888899999999999886554
No 268
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.50 E-value=0.03 Score=54.56 Aligned_cols=92 Identities=18% Similarity=0.282 Sum_probs=61.1
Q ss_pred HHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH
Q 013784 183 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 260 (436)
Q Consensus 183 ~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~ 260 (436)
.+.++++++..+ .++.+-+ ++++++.+ .+ ++|+|.|-++... .+.+.+
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev-------~tlee~~~----A~-~aGaD~I~ld~~~------------------~~~l~~ 233 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVEC-------SSLQEAVQ----AA-EAGADLVLLDNFK------------------PEELHP 233 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEE-------SSHHHHHH----HH-HTTCSEEEEESCC------------------HHHHHH
T ss_pred HHHHHHHHHhCCcCCeEEEec-------CCHHHHHH----HH-HcCCCEEEECCCC------------------HHHHHH
Confidence 445566666543 3444421 34555443 22 4899999886311 233332
Q ss_pred ----HHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 261 ----LLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 261 ----l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+...++++||.++||| +.+.+.++.++|+|++.+|+.....|++
T Consensus 234 ~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i~~a~~~ 281 (299)
T 2jbm_A 234 TATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLTQAAPAL 281 (299)
T ss_dssp HHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHHHSCCCC
T ss_pred HHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhhcCCCCc
Confidence 2223567999999999 9999999999999999999987776775
No 269
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.50 E-value=0.025 Score=54.37 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=55.6
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++..+++|+++|.|-.-....+| ..+.+..+.+.+ ++||+..+.|.|..++.++...|||+|.++-+
T Consensus 85 A~~y~~~GA~~IsVltd~~~f~G------------s~~~L~~ir~~v-~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a 151 (272)
T 3tsm_A 85 AKAYEEGGAACLSVLTDTPSFQG------------APEFLTAARQAC-SLPALRKDFLFDPYQVYEARSWGADCILIIMA 151 (272)
T ss_dssp HHHHHHTTCSEEEEECCSTTTCC------------CHHHHHHHHHTS-SSCEEEESCCCSTHHHHHHHHTTCSEEEEETT
T ss_pred HHHHHHCCCCEEEEeccccccCC------------CHHHHHHHHHhc-CCCEEECCccCCHHHHHHHHHcCCCEEEEccc
Confidence 56678899999988643332222 166776766654 99999999999999999999999999999988
Q ss_pred HHhC
Q 013784 299 AYQN 302 (436)
Q Consensus 299 ~l~~ 302 (436)
++.+
T Consensus 152 ~L~~ 155 (272)
T 3tsm_A 152 SVDD 155 (272)
T ss_dssp TSCH
T ss_pred ccCH
Confidence 7743
No 270
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.47 E-value=0.23 Score=47.60 Aligned_cols=120 Identities=8% Similarity=-0.025 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+ +-+...|. -.|++++++|+|.|=. |.....+. . +|-..+.-..+.+...+++|++.++.|+.+ ..+
T Consensus 16 g~~i-~~~tayDa----~sA~l~e~aG~d~ilv--GdSl~~~~-l-G~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~ 85 (275)
T 1o66_A 16 GEKI-AMLTAYES----SFAALMDDAGVEMLLV--GDSLGMAV-Q-GRKSTLPVSLRDMCYHTECVARGAKNAMIV-SDL 85 (275)
T ss_dssp TCCE-EEEECCSH----HHHHHHHHTTCCEEEE--CTTHHHHT-T-CCSSSTTCCHHHHHHHHHHHHHHCSSSEEE-EEC
T ss_pred CCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-c-CCCCCCCCCHHHHHHHHHHHHhhCCCCeEE-EEC
Confidence 4444 34555555 4788899999999833 32222211 1 223334456677778888888877766444 455
Q ss_pred CCCC-CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 204 GVDD-HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 204 G~~~-~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
++-. ..+.++..+.+.++.+ +|+++|.+-|... -.+.++.+++. .|||++
T Consensus 86 pfgsy~~s~~~a~~na~rl~k-aGa~aVklEdg~e----------------~~~~I~al~~a--gIpV~g 136 (275)
T 1o66_A 86 PFGAYQQSKEQAFAAAAELMA-AGAHMVKLEGGVW----------------MAETTEFLQMR--GIPVCA 136 (275)
T ss_dssp CTTSSSSCHHHHHHHHHHHHH-TTCSEEEEECSGG----------------GHHHHHHHHHT--TCCEEE
T ss_pred CCCCccCCHHHHHHHHHHHHH-cCCcEEEECCcHH----------------HHHHHHHHHHc--CCCeEe
Confidence 5422 2345555555556665 9999999976421 14455566554 788873
No 271
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.45 E-value=0.063 Score=53.65 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=65.4
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHH
Q 013784 178 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
.++...+.++.+++...+|+.+-+-. .. .+. ++.+.++|+|.|+++.-. |.+ ..-.+.
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~--~~----~e~----a~~l~eaGad~I~ld~a~----G~~--------~~~~~~ 136 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGV--NE----IER----AKLLVEAGVDVIVLDSAH----GHS--------LNIIRT 136 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECT--TC----HHH----HHHHHHTTCSEEEECCSC----CSB--------HHHHHH
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCC--CH----HHH----HHHHHHcCcCeEEEeCCC----CCc--------HHHHHH
Confidence 46667788888887777888776643 22 122 223346899999986321 211 111456
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++++.+ ++|||+ |.+.+.++++++.+.|||+|.+|
T Consensus 137 i~~i~~~~-~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 137 LKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhc-CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 66666766 899987 66899999999999999999986
No 272
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.30 E-value=0.05 Score=54.46 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=62.9
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHH
Q 013784 178 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
.++...+.++.+++.-.+++.+- .|+.. +.. +.+ +.+.++|+|.|.++.- .|.+ +...+.
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~--vg~~~-~~~-~~~----~~lieaGvd~I~idta----~G~~--------~~~~~~ 139 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAA--VGAAP-GNE-ERV----KALVEAGVDVLLIDSS----HGHS--------EGVLQR 139 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEE--CCSCT-TCH-HHH----HHHHHTTCSEEEEECS----CTTS--------HHHHHH
T ss_pred CHHHHHHHHHHHHhcCceeEEEE--eccCh-hHH-HHH----HHHHhCCCCEEEEeCC----CCCC--------HHHHHH
Confidence 46677788888877533344333 33322 112 222 2334689999988521 1211 111455
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++++.++++|||+ |.+.+.++++++.+.|||+|.+|
T Consensus 140 I~~ik~~~p~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 140 IRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhcCCCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 677777777888876 77899999999999999999995
No 273
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.28 E-value=1.1 Score=45.08 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHHCCCCEE-EecC---------CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccC
Q 013784 135 NLDNLAKATELANAYNYDEI-NLNC---------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~I-dLN~---------gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
..+++....+.+++.|...+ ++.- -++.- ..|+..+.+.+++.++ ..++.||.+|....
T Consensus 191 ~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~l------kIgs~~~~n~~LL~~~-----a~~gkPVilk~G~~ 259 (385)
T 3nvt_A 191 GLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVI------QIGARNMQNFELLKAA-----GRVDKPILLKRGLS 259 (385)
T ss_dssp THHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEE------EECGGGTTCHHHHHHH-----HTSSSCEEEECCTT
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEE------EECcccccCHHHHHHH-----HccCCcEEEecCCC
Confidence 35667667777777776533 2210 13322 2477778887655543 24689999997663
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEE-ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----CCCCCH
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINTV 279 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~v-hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan----GgI~s~ 279 (436)
.+.+++...+. .+...|..-|++ |..+..|... + ...+++..+..+.+.+ ++||+.. +|-.+.
T Consensus 260 ----~t~~e~~~Ave-~i~~~Gn~~i~L~~rG~s~yp~~-~-----~~~ldl~~i~~lk~~~-~lpV~~D~th~~G~r~~ 327 (385)
T 3nvt_A 260 ----ATIEEFIGAAE-YIMSQGNGKIILCERGIRTYEKA-T-----RNTLDISAVPILKKET-HLPVMVDVTHSTGRKDL 327 (385)
T ss_dssp ----CCHHHHHHHHH-HHHTTTCCCEEEEECCBCCSCCS-S-----SSBCCTTHHHHHHHHB-SSCEEEEHHHHHCCGGG
T ss_pred ----CCHHHHHHHHH-HHHHcCCCeEEEEECCCCCCCCC-C-----ccccCHHHHHHHHHhc-CCCEEEcCCCCCCccch
Confidence 34555555443 345678755554 5324322210 1 1223466666776655 8999664 222221
Q ss_pred --HHHHHHHHcCCCeeeehH
Q 013784 280 --DEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 280 --~da~~~l~~Gad~VmiGR 297 (436)
.-+.++...||||++|=+
T Consensus 328 v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 328 LLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp HHHHHHHHHHTTCSEEEEEB
T ss_pred HHHHHHHHHHhCCCEEEEEe
Confidence 235567779999999864
No 274
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.23 E-value=0.025 Score=54.36 Aligned_cols=74 Identities=11% Similarity=0.075 Sum_probs=57.5
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
+++.+++.|+++|.|..-....+|. ++.+..+.+.+ ++||+..+.|.|..++.++++.|||+|.++-
T Consensus 77 ~A~~y~~~GA~~isvltd~~~f~Gs------------~~~l~~ir~~v-~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 77 LAQAYQDGGARIVSVVTEQRRFQGS------------LDDLDAVRASV-SIPVLRKDFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp HHHHHHHTTCSEEEEECCGGGHHHH------------HHHHHHHHHHC-SSCEEEESCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred HHHHHHHcCCCEEEEecChhhcCCC------------HHHHHHHHHhC-CCCEEECccccCHHHHHHHHHcCCCEEEEec
Confidence 3567788999999987443333331 56676776664 9999999999999999999999999999998
Q ss_pred HHHhCCc
Q 013784 298 AAYQNPW 304 (436)
Q Consensus 298 a~l~~P~ 304 (436)
+.+.+..
T Consensus 144 a~l~~~~ 150 (272)
T 3qja_A 144 AALEQSV 150 (272)
T ss_dssp GGSCHHH
T ss_pred ccCCHHH
Confidence 8776544
No 275
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.0081 Score=57.38 Aligned_cols=71 Identities=15% Similarity=0.018 Sum_probs=56.9
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++.+++.|++.+++---+ + .+.+.+.++.+.. .+||..-|||.+. ++++++ .|||-|.+|++
T Consensus 44 A~~~~~~Ga~~l~vvDL~----~-----------~n~~~i~~i~~~~-~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~ 105 (260)
T 2agk_A 44 AKLYKDRDVQGCHVIKLG----P-----------NNDDAAREALQES-PQFLQVGGGINDT-NCLEWL-KWASKVIVTSW 105 (260)
T ss_dssp HHHHHHTTCTTCEEEEES----S-----------SCHHHHHHHHHHS-TTTSEEESSCCTT-THHHHT-TTCSCEEECGG
T ss_pred HHHHHHcCCCEEEEEeCC----C-----------CCHHHHHHHHhcC-CceEEEeCCCCHH-HHHHHh-cCCCEEEECcH
Confidence 455677899998873211 1 1267788888776 7999999999987 999999 99999999999
Q ss_pred HHhC-----Ccchh
Q 013784 299 AYQN-----PWYTL 307 (436)
Q Consensus 299 ~l~~-----P~lf~ 307 (436)
++.| |.++.
T Consensus 106 a~~~~g~~~p~~~~ 119 (260)
T 2agk_A 106 LFTKEGHFQLKRLE 119 (260)
T ss_dssp GBCTTCCBCHHHHH
T ss_pred HHhhcCCCCHHHHH
Confidence 9999 98753
No 276
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.19 E-value=0.09 Score=50.81 Aligned_cols=92 Identities=20% Similarity=0.237 Sum_probs=60.1
Q ss_pred HHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHH
Q 013784 183 GEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYA 260 (436)
Q Consensus 183 ~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~ 260 (436)
.+.++.+++..+ .+|.+-+ ++.+++.+ . .++|+|+|-++.-. .+.+.+
T Consensus 183 ~~av~~ar~~~~~~~~IgVev-------~t~eea~e----A-~~aGaD~I~ld~~~------------------~~~~k~ 232 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEV-------RSLEELEE----A-LEAGADLILLDNFP------------------LEALRE 232 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEE-------SSHHHHHH----H-HHHTCSEEEEESCC------------------HHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEe-------CCHHHHHH----H-HHcCCCEEEECCCC------------------HHHHHH
Confidence 345566666543 3454421 23445433 2 24799999887532 122223
Q ss_pred HHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 261 LLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 261 l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
.++.. .++|+.+.||| +.+.+.+..++|+|+|.+|.....-|++
T Consensus 233 av~~v~~~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 233 AVRRVGGRVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp HHHHHTTSSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHSCCCC
T ss_pred HHHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcCCCce
Confidence 32222 26899999999 6999999999999999999988777775
No 277
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=95.09 E-value=0.059 Score=49.92 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=85.7
Q ss_pred CCcEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCC-CCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 124 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCP-SPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 124 ~~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP-~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
+.++++=+--+| |...+.+++.+.++ +|.+.+|.... ... +... + . +.-|++-+
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~-ad~vTvh~~~G~~~~-----------------~~~~-~---~--~~~v~vLt 105 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDI-TNSFIAHAFVGVEGS-----------------LASL-S---Q--RVDLFLVL 105 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEGGGCTTTT-----------------HHHH-H---H--HSEEEEEC
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHh-hheEEEeCCCCcHHH-----------------HHhH-h---c--CCCEEEEE
Confidence 567877775555 66667777888889 99999996433 211 1111 1 1 12355655
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH-H
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-D 280 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~-~ 280 (436)
.....+. ..+....++++.+++|++.+++.+.. .+.+..+.+..++ .++..+||.-- .
T Consensus 106 s~s~~~~--~~~~v~~~a~~a~~~G~~GvV~sat~------------------~~e~~~ir~~~~~-f~~v~pGI~~~g~ 164 (215)
T 3ve9_A 106 SMSHPGW--NDAFYPYLREVARRVNPKGFVAPATR------------------PSMISRVKGDFPD-KLVISPGVGTQGA 164 (215)
T ss_dssp CCSSTTC--CGGGHHHHHHHHHHHCCSEEECCTTS------------------HHHHHHHHHHCTT-SEEEECCTTSTTC
T ss_pred ecCCcch--HHHHHHHHHHHHHHcCCCceeeCCCC------------------HHHHHHHHHhCCC-cEEEcCCCCcCcC
Confidence 5532221 12333345667778999998875432 2233445555556 68888999742 2
Q ss_pred HHHHHHHcCCCeeeehHHHHhCCc
Q 013784 281 EVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 281 da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+..++++.|+|.+.+||+++..++
T Consensus 165 ~~~~a~~~Gad~iVvGr~I~~a~d 188 (215)
T 3ve9_A 165 KPGIALCHGADYEIVGRSVYQSAD 188 (215)
T ss_dssp CTTHHHHTTCSEEEECHHHHTSSS
T ss_pred CHHHHHHcCCCEEEeCHHHcCCCC
Confidence 566788899999999999998766
No 278
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=94.98 E-value=0.11 Score=50.63 Aligned_cols=144 Identities=17% Similarity=0.185 Sum_probs=85.0
Q ss_pred CCcEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCc----EE
Q 013784 124 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP----VS 198 (436)
Q Consensus 124 ~~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iP----vs 198 (436)
+.++++=+--+| |.....+++.+.++|+|.+.+|.. |+ ++.+...+++..+.-.-| |+
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~------------~G-----~~~m~aa~e~a~~~~~~~~llaVt 138 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHAS------------AG-----KIAIQEVMTRLSKFSKRPLVLAVS 138 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG------------GC-----HHHHHHHHHHHTTSSSCCEEEEEC
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEecc------------CC-----HHHHHHHHHHHHhcCCCceEEEEE
Confidence 566776665444 666667777788899999999852 11 344555555554432223 22
Q ss_pred EEeccCCCC-----CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 199 VKCRIGVDD-----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 199 vKiR~G~~~-----~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
+....+..+ ..++.+....+++...++|++.++.++.+ .. .+.+..++-.++..
T Consensus 139 vLTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~E------------------~~---~IR~~~~~~fl~VT 197 (303)
T 3ru6_A 139 ALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFE------------------SK---KIKEHTSSNFLTLT 197 (303)
T ss_dssp SCTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTTT------------------HH---HHHHHSCTTSEEEE
T ss_pred EecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHHH------------------HH---HHHHhCCCccEEEC
Confidence 233221100 01233333345666778999998864321 22 33333434457888
Q ss_pred CCCCCHH----------HHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 274 GGINTVD----------EVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 274 GgI~s~~----------da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+||.-.. .+.++++.|||.+.+||+++..++-
T Consensus 198 PGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a~dp 239 (303)
T 3ru6_A 198 PGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENP 239 (303)
T ss_dssp CCCCTTC--------CCSHHHHHHTTCSEEEECHHHHTSSCH
T ss_pred CCcCcccCCcccccccCCHHHHHHcCCCEEEEChHHhCCCCH
Confidence 9887211 3556778999999999999987663
No 279
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=94.96 E-value=0.028 Score=50.94 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=36.2
Q ss_pred HHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCC
Q 013784 260 ALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNP 303 (436)
Q Consensus 260 ~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P 303 (436)
++++...++|||+.|+|.|.+++.+ ++.||++|..|+--|.+-
T Consensus 142 ~~I~~v~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 142 KVARKIPGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp HHHTTSTTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 3444445899999999999999999 999999999998777653
No 280
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=94.96 E-value=0.21 Score=46.51 Aligned_cols=191 Identities=12% Similarity=0.038 Sum_probs=100.8
Q ss_pred CCcEEEcCCCCCChHHH-HHHHHHcCC-CcEEEe--ccccchhhhhcccchhhhhccCCCCCcEEEEEcCC-CHHHHHHH
Q 013784 68 PPWFSVAPMMDWTDNHY-RTLARLISK-HAWLYT--EMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGS-NLDNLAKA 142 (436)
Q Consensus 68 ~n~iilAPMagvtd~~f-r~~~~~~Gg-~gl~~t--emv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~-~p~~~~~a 142 (436)
++++++| .++++..- ..++.+.|+ .+++=. ++.. ..+..-++.+.+. .+.++++=+--+ .|+....+
T Consensus 12 ~~~lilA--lD~~~~~~a~~~v~~~~~~v~~~Kvg~~lf~----~~G~~~v~~l~~~--~g~~v~lD~Kl~DipnTv~~~ 83 (228)
T 3m47_A 12 MNRLILA--MDLMNRDDALRVTGEVREYIDTVKIGYPLVL----SEGMDIIAEFRKR--FGCRIIADFKVADIPETNEKI 83 (228)
T ss_dssp GGGEEEE--CCCCSHHHHHHHHHTTTTTCSEEEEEHHHHH----HHCTHHHHHHHHH--HCCEEEEEEEECSCHHHHHHH
T ss_pred CCCeEEE--eCCCCHHHHHHHHHHcCCcccEEEEcHHHHH----hcCHHHHHHHHhc--CCCeEEEEEeecccHhHHHHH
Confidence 4577776 35665543 344455543 344322 2221 1122222233221 235566555433 46666777
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC-CCcHHHHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD-HDSYNQLCDFIYKV 221 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~-~~~~~~~~~~la~~ 221 (436)
++.+.++|+|.|.+|.-+ | .+.+...++.+++. +.-|++-....-.. .+...++.+.++++
T Consensus 84 ~~~~~~~gad~vtvh~~~-----------G------~~~l~~~~~~~~~~-g~~v~vLt~~s~~~~~~~~~~~~~~~a~~ 145 (228)
T 3m47_A 84 CRATFKAGADAIIVHGFP-----------G------ADSVRACLNVAEEM-GREVFLLTEMSHPGAEMFIQGAADEIARM 145 (228)
T ss_dssp HHHHHHTTCSEEEEESTT-----------C------HHHHHHHHHHHHHH-TCEEEEECCCCSGGGGTTHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEeccC-----------C------HHHHHHHHHHHHhc-CCCeEEEEeCCCccHHHHHHHHHHHHHHH
Confidence 777888999999998522 1 23455555555432 33455544442111 11233455666778
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC-cEEEEeCCCCCH-HHHHHHHHcCCCeeeehHHH
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTV-DEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~-iPVIanGgI~s~-~da~~~l~~Gad~VmiGRa~ 299 (436)
..+.|++.+++.+.. -+.+..+.+..++ .++ ..+||.-. .+. ++++.|||.+.+||++
T Consensus 146 a~~~G~~GvV~~at~------------------~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I 205 (228)
T 3m47_A 146 GVDLGVKNYVGPSTR------------------PERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSI 205 (228)
T ss_dssp HHHTTCCEEECCSSC------------------HHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHH
T ss_pred HHHhCCcEEEECCCC------------------hHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHH
Confidence 888999998765321 1223344443333 555 77787532 245 6677999999999998
Q ss_pred HhCCc
Q 013784 300 YQNPW 304 (436)
Q Consensus 300 l~~P~ 304 (436)
+..++
T Consensus 206 ~~a~d 210 (228)
T 3m47_A 206 YLADN 210 (228)
T ss_dssp HTSSC
T ss_pred hCCCC
Confidence 87655
No 281
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=94.88 E-value=0.16 Score=51.26 Aligned_cols=130 Identities=12% Similarity=-0.086 Sum_probs=82.8
Q ss_pred HHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFI 218 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~~l 218 (436)
+.++.+.+.||..+-+..|-|... + +..|..-..+++.-.+.+++||++++ +++.+-.--+|+ .++..+ +
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~--~-~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~----~~~A~~-~ 229 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAE--K-TRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQ----LLPAMQ-I 229 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHH--H-HTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBC----HHHHHH-H
T ss_pred HHHHHHHHhCCCEEEEcCCCcccc--c-cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC----HHHHHH-H
Confidence 444556678999998876522100 0 00010001235667788999998874 667776555664 334444 3
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-CCeeee
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG-AHHVMV 295 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G-ad~Vmi 295 (436)
++.+++.|+++|.- . +++.+++...++.+.. ++||.+.+.+.+.+++.++++.| +|.|++
T Consensus 230 ~~~L~~~~i~~iEe----P------------~~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~ 290 (400)
T 4dxk_A 230 AKALTPYQTFWHED----P------------IKMDSLSSLTRYAAVS-PAPISASETLGSRWAFRDLLETGAAGVVML 290 (400)
T ss_dssp HHHTGGGCCSEEEC----C------------BCTTSGGGHHHHHHHC-SSCEEECTTCCHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHhhcCCCEEEc----C------------CCcccHHHHHHHHHhC-CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 55678889988871 1 1111244455666665 89999999999999999999955 788885
No 282
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.85 E-value=0.52 Score=44.86 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=85.3
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+.|+ +-+...|. -.|++++++|+|.|=+ |.....+. .| |-..+.-..+.+..-+++|++.++.|+.+ ..+
T Consensus 16 g~~i-~~~tayD~----~sA~l~e~aG~d~ilv--Gdsl~~~~-lG-~~dt~~vtldemi~h~~aV~r~~~~~~vv-aD~ 85 (264)
T 1m3u_A 16 KKRF-ATITAYDY----SFAKLFADEGLNVMLV--GDSLGMTV-QG-HDSTLPVTVADIAYHTAAVRRGAPNCLLL-ADL 85 (264)
T ss_dssp TCCE-EEEECCSH----HHHHHHHHHTCCEEEE--CTTHHHHT-TC-CSSSTTCCHHHHHHHHHHHHHHCTTSEEE-EEC
T ss_pred CCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHHHH-cC-CCCCCCcCHHHHHHHHHHHHhhCCCCcEE-EEC
Confidence 4444 34555565 4788889999999966 43322211 11 23334455677777788888877766444 455
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-----------
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL----------- 272 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa----------- 272 (436)
++-...+.++..+.+.++.+ +|+++|.+-|... -.+.++.+++. .|||++
T Consensus 86 pfgsy~~~~~a~~~a~rl~k-aGa~aVklEgg~e----------------~~~~I~al~~a--gipV~gHiGLtPq~v~~ 146 (264)
T 1m3u_A 86 PFMAYATPEQAFENAATVMR-AGANMVKIEGGEW----------------LVETVQMLTER--AVPVCGHLGLTPQSVNI 146 (264)
T ss_dssp CTTSSSSHHHHHHHHHHHHH-TTCSEEECCCSGG----------------GHHHHHHHHHT--TCCEEEEEESCGGGHHH
T ss_pred CCCCcCCHHHHHHHHHHHHH-cCCCEEEECCcHH----------------HHHHHHHHHHC--CCCeEeeecCCceeecc
Confidence 54222255666665556665 9999999876421 14556666654 789883
Q ss_pred eCCC----CCHH-------HHHHHHHcCCCeeee
Q 013784 273 NGGI----NTVD-------EVNAALRKGAHHVMV 295 (436)
Q Consensus 273 nGgI----~s~~-------da~~~l~~Gad~Vmi 295 (436)
.||. .+.+ +++++.+.||+++.+
T Consensus 147 ~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 147 FGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp HTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 3554 2333 333344479999876
No 283
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.81 E-value=0.052 Score=57.18 Aligned_cols=78 Identities=12% Similarity=0.008 Sum_probs=52.9
Q ss_pred hcCC---ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-----CCcEEEEeCCCCCHHHHHHHHH-------
Q 013784 223 SLSP---TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-----PDLTFTLNGGINTVDEVNAALR------- 287 (436)
Q Consensus 223 e~~G---vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-----~~iPVIanGgI~s~~da~~~l~------- 287 (436)
.+.| +|+|.+..--. ..+ ..+...++..++.+.++.+.. .++||++-||| +++.+.++++
T Consensus 125 ~~~G~~~aDYv~~Gpvf~---T~t-K~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~ 199 (540)
T 3nl6_A 125 SKMGPDMVDYIGVGTLFP---TLT-KKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNG 199 (540)
T ss_dssp HHTCC--CCEEEESCCSC---CCC-CC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTS
T ss_pred HHcCCCCCCEEEEcCCCC---CCC-CCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhccccc
Confidence 4578 99999843211 001 111000234466666665432 48999999999 7899999998
Q ss_pred -cCCCeeeehHHHHhCCcc
Q 013784 288 -KGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 288 -~Gad~VmiGRa~l~~P~l 305 (436)
.|||+|.++++++..++.
T Consensus 200 ~~GadgvAVvsaI~~a~dp 218 (540)
T 3nl6_A 200 KRSLDGICVVSDIIASLDA 218 (540)
T ss_dssp SCBCSCEEESHHHHTCTTH
T ss_pred ccCceEEEEeHHHhcCCCH
Confidence 789999999999987664
No 284
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.74 E-value=0.039 Score=55.10 Aligned_cols=63 Identities=11% Similarity=0.057 Sum_probs=47.1
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.+.++|+|.|+++.-. |.+ ..-++.+..+++..+++|||+ |+|.+++++..+.+.|||+|.+|
T Consensus 107 ~a~~aGvdvI~id~a~----G~~--------~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 107 ALRDAGADFFCVDVAH----AHA--------KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHTTCCEEEEECSC----CSS--------HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEeCCC----CCc--------HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 4456899999996321 211 111667777777666899987 67999999999999999999985
No 285
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=94.70 E-value=1.6 Score=41.78 Aligned_cols=142 Identities=12% Similarity=0.114 Sum_probs=89.1
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR 202 (436)
...+++.|.+.+.++....++.+.+.|+|.||+-.-+=. +. .+.+.+.+.+..+++.+ ++|+.+=+|
T Consensus 39 ~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~------~~------~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 39 APKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFA------NV------TTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCT------TT------TCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEecccc------cc------CcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 345889999999999988888888889999999643211 11 34577889999999877 799888777
Q ss_pred cCCCC---CCcHHHHHHHHHHHhhcCC-ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHH---hcCCCcEEEEe--
Q 013784 203 IGVDD---HDSYNQLCDFIYKVSSLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL---RDFPDLTFTLN-- 273 (436)
Q Consensus 203 ~G~~~---~~~~~~~~~~la~~~e~~G-vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~---~~~~~iPVIan-- 273 (436)
.-++. ..+.++-.+++..+++ .| +|+|.|--... -+.+.+++ +.. ++.||++
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~-~g~~dyIDvEl~~~-----------------~~~~~~l~~~a~~~-~~kvI~S~H 167 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVD-SGLVDMIDLELFTG-----------------DDEVKATVGYAHQH-NVAVIMSNH 167 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHH-HTCCSEEEEEGGGC-----------------HHHHHHHHHHHHHT-TCEEEEEEE
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHh-cCCCCEEEEECcCC-----------------HHHHHHHHHHHHhC-CCEEEEEee
Confidence 63221 1122333444444444 67 99999853211 12333333 232 6788886
Q ss_pred --CCCCCHHHHHHHH----HcCCCeeeeh
Q 013784 274 --GGINTVDEVNAAL----RKGAHHVMVG 296 (436)
Q Consensus 274 --GgI~s~~da~~~l----~~Gad~VmiG 296 (436)
.+--+.+++...+ +.|||-|=|.
T Consensus 168 df~~tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 168 DFHKTPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp ESSCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCCcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 3333445555443 3788866544
No 286
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.68 E-value=0.68 Score=44.30 Aligned_cols=127 Identities=11% Similarity=0.041 Sum_probs=76.7
Q ss_pred hhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-C
Q 013784 116 RFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-N 194 (436)
Q Consensus 116 ~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~ 194 (436)
.+.+.+..+.|+ +-+...|. -.|++++++|+|.| +--.+-. .+. .| |-..+.-..+.+..-+++|++.+ .
T Consensus 20 ~lr~~~~~g~~i-~m~tayDa----~sA~l~e~aG~d~i-lvGdSl~-~~~-lG-~~dt~~vtldem~~h~~aV~r~~~~ 90 (275)
T 3vav_A 20 KLQAMREAGEKI-AMLTCYDA----SFAALLDRANVDVQ-LIGDSLG-NVL-QG-QTTTLPVTLDDIAYHTACVARAQPR 90 (275)
T ss_dssp HHHHHHHHTCCE-EEEECCSH----HHHHHHHHTTCSEE-EECTTHH-HHT-TC-CSSSTTCCHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHCCCcE-EEEeCcCH----HHHHHHHHcCCCEE-EECcHHH-HHH-cC-CCCCCccCHHHHHHHHHHHHhcCCC
Confidence 333333344554 44555555 47788999999999 4321111 111 11 23333345566777778887776 4
Q ss_pred CcEEEEeccC-CCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 195 VPVSVKCRIG-VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 195 iPvsvKiR~G-~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
.||.+=+..| + .+.++..+.+.++.+ +|+++|.+-|... ..+.+..+++. .|||++.
T Consensus 91 ~~vvaD~pfgsY---~s~~~a~~~a~rl~k-aGa~aVklEdg~~----------------~~~~i~~l~~~--GIpv~gH 148 (275)
T 3vav_A 91 ALIVADLPFGTY---GTPADAFASAVKLMR-AGAQMVKFEGGEW----------------LAETVRFLVER--AVPVCAH 148 (275)
T ss_dssp SEEEEECCTTSC---SSHHHHHHHHHHHHH-TTCSEEEEECCGG----------------GHHHHHHHHHT--TCCEEEE
T ss_pred CCEEEecCCCCC---CCHHHHHHHHHHHHH-cCCCEEEECCchh----------------HHHHHHHHHHC--CCCEEEe
Confidence 7899888875 5 345566665566665 6999999976421 14556666654 7888864
No 287
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=94.45 E-value=0.51 Score=47.56 Aligned_cols=124 Identities=8% Similarity=-0.036 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHC-CCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcHHH
Q 013784 136 LDNLAKATELANAY-NYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQ 213 (436)
Q Consensus 136 p~~~~~aA~~~~~~-G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~ 213 (436)
++.+++.++.+.+. ||..+.+..| .+++.-.+.+++||+.+ ++++.+-..-+|+. .+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG-----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~----~~ 227 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT-----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSV----PD 227 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC-----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCH----HH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC-----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCH----HH
Confidence 68888877777666 9999988765 12344566777777765 56677766666653 33
Q ss_pred HHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCe
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHH 292 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~ 292 (436)
..++ .+.+++.|+.+|. . .++ +++...++.+.. ++||.+...+.+.+++.++++. .+|.
T Consensus 228 A~~~-~~~l~~~~i~~iE----q------------P~~--d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~d~ 287 (398)
T 4dye_A 228 SVRA-GIALEELDLEYLE----D------------PCV--GIEGMAQVKAKV-RIPLCTNMCVVRFEDFAPAMRLNAVDV 287 (398)
T ss_dssp HHHH-HHHHGGGCCSEEE----C------------CSS--HHHHHHHHHHHC-CSCEEESSSCCSGGGHHHHHHTTCCSE
T ss_pred HHHH-HHHHhhcCCCEEc----C------------CCC--CHHHHHHHHhhC-CCCEEeCCcCCCHHHHHHHHHhCCCCE
Confidence 3343 4566778888875 1 112 467777777765 8999999999999999999984 5898
Q ss_pred eeehHHHH
Q 013784 293 VMVGRAAY 300 (436)
Q Consensus 293 VmiGRa~l 300 (436)
|++--+-.
T Consensus 288 v~~k~~~~ 295 (398)
T 4dye_A 288 IHGDVYKW 295 (398)
T ss_dssp EEECHHHH
T ss_pred EEeCcccc
Confidence 88654443
No 288
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.39 E-value=1.8 Score=42.58 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=110.1
Q ss_pred EEEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHH
Q 013784 71 FSVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAK 141 (436)
Q Consensus 71 iilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~ 141 (436)
.++.|+. .+....++.++. ..|-.|+++.+...--..+...++ ++...+......|+++.+.+++.++..+
T Consensus 38 alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~ 117 (343)
T 2v9d_A 38 PVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIE 117 (343)
T ss_dssp EECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHH
T ss_pred eeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHH
Confidence 3556664 255566777753 444346666543322111111111 1112222334679999999999999999
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFI 218 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~l 218 (436)
.++.++++|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+
T Consensus 118 la~~A~~~Gadavlv~--~P~Y~-------~----~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l--~~e~~---- 178 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVI--NPYYW-------K----VSEANLIRYFEQVADSVTLPVMLYNFPALTGQDL--TPALV---- 178 (343)
T ss_dssp HHHHHHHHTCSEEEEE--CCSSS-------C----CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCC--CHHHH----
T ss_pred HHHHHHhcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCC--CHHHH----
Confidence 9999999999998765 34421 1 2356678888888888899987643 345433 23333
Q ss_pred HHHh-hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC----CCcEEEEeCCCCCHHHHHHHHHcCCCee
Q 013784 219 YKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF----PDLTFTLNGGINTVDEVNAALRKGAHHV 293 (436)
Q Consensus 219 a~~~-e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~----~~iPVIanGgI~s~~da~~~l~~Gad~V 293 (436)
.+++ +.-.+-+|--.. | ++..+.++++.. .++. +.+|+= +.+...+..|++|+
T Consensus 179 ~~La~~~pnIvgiKdss------g------------d~~~~~~l~~~~~~~~~~f~-v~~G~D---~~~l~~l~~Ga~G~ 236 (343)
T 2v9d_A 179 KTLADSRSNIIGIKDTI------D------------SVAHLRSMIHTVKGAHPHFT-VLCGYD---DHLFNTLLLGGDGA 236 (343)
T ss_dssp HHHHHHCTTEEEEEECC------S------------CHHHHHHHHHHHHHHCTTCE-EEESSG---GGHHHHHHTTCCEE
T ss_pred HHHHHhCCCEEEEEeCC------C------------CHHHHHHHHHhcCCCCCCEE-EEECcH---HHHHHHHHCCCCEE
Confidence 2333 222233333111 1 133333443321 2444 466631 33556777899999
Q ss_pred eehHHHHhCCcchhh
Q 013784 294 MVGRAAYQNPWYTLG 308 (436)
Q Consensus 294 miGRa~l~~P~lf~~ 308 (436)
+.|.+-+ -|..+.+
T Consensus 237 is~~anv-~P~~~~~ 250 (343)
T 2v9d_A 237 ISASGNF-APQVSVN 250 (343)
T ss_dssp CCGGGTT-CHHHHHH
T ss_pred EeCHHHh-HHHHHHH
Confidence 9998764 4655443
No 289
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.36 E-value=3.2 Score=39.21 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=69.1
Q ss_pred CCCc-EEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEE
Q 013784 123 EQHP-IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVK 200 (436)
Q Consensus 123 ~~~p-i~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvK 200 (436)
+++| ++|-|.+.+.+++.+.++.+.+.|+|.||+-.-+=. +. .+.+.+.+.+..+++.. ++|+.+=
T Consensus 17 ~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~------~~------~~~~~v~~~l~~lr~~~~~lPiI~T 84 (258)
T 4h3d_A 17 EGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFE------NV------ENIKEVKEVLYELRSYIHDIPLLFT 84 (258)
T ss_dssp SSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCT------TT------TCHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecccc------cc------CCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3455 889999999999988888888899999999753211 11 46788999999998876 6998888
Q ss_pred eccCCCCC---CcHHHHHHHHHHHhhcCCccEEEEc
Q 013784 201 CRIGVDDH---DSYNQLCDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 201 iR~G~~~~---~~~~~~~~~la~~~e~~Gvd~I~vh 233 (436)
+|.-++.. .+-++-.+.+..+++..++|+|.+-
T Consensus 85 ~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 85 FRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp CCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 88743321 2223333444445554459999985
No 290
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=94.29 E-value=0.21 Score=50.19 Aligned_cols=128 Identities=13% Similarity=0.180 Sum_probs=82.1
Q ss_pred cEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 126 PIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
|+...+. +.+++.+.+.++.+.+.||+.+.+..| | . .+ .+.+++|++.+ ++.+.+-..-
T Consensus 151 ~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~--------~------~d----~~~v~avr~a~~~~~l~vDaN~ 211 (393)
T 1wuf_A 151 KVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P--------N------KD----IQFVEAVRKSFPKLSLMADANS 211 (393)
T ss_dssp EBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T--------T------BS----HHHHHHHHTTCTTSEEEEECTT
T ss_pred eeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h--------H------HH----HHHHHHHHHHcCCCEEEEECCC
Confidence 3333444 346888888877777779999988654 1 0 22 34567777765 3334444444
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+. ++. ++ .+.+++.++.+|- . .+++.+++...++.+.. ++||.+.-.+.+..++.
T Consensus 212 ~~~~----~~a-~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 268 (393)
T 1wuf_A 212 AYNR----EDF-LL-LKELDQYDLEMIE----Q------------PFGTKDFVDHAWLQKQL-KTRICLDENIRSVKDVE 268 (393)
T ss_dssp CCCG----GGH-HH-HHTTGGGTCSEEE----C------------CSCSSCSHHHHHHHTTC-SSEEEECTTCCSHHHHH
T ss_pred CCCH----HHH-HH-HHHHHhCCCeEEE----C------------CCCCcCHHHHHHHHHhC-CCCEEECCCcCCHHHHH
Confidence 5543 233 33 3566778887776 1 12222366666776664 89999999999999999
Q ss_pred HHHHcC-CCeeee
Q 013784 284 AALRKG-AHHVMV 295 (436)
Q Consensus 284 ~~l~~G-ad~Vmi 295 (436)
++++.| +|.|++
T Consensus 269 ~~i~~~a~d~v~i 281 (393)
T 1wuf_A 269 QAHSIGSCRAINL 281 (393)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHhCCCCEEEe
Confidence 999855 788874
No 291
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.24 E-value=1.1 Score=43.52 Aligned_cols=153 Identities=14% Similarity=0.145 Sum_probs=87.1
Q ss_pred CCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC-------CCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 121 SPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 121 ~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~-------gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
+..+.|+ +=+...|. -.|++++++|||.|=+.- |.|.. ..-..+.+...+++|...+
T Consensus 25 ~~~~~~i-~~~~ayD~----~sA~l~e~aG~dai~vs~~s~a~~~G~pD~-----------~~vt~~em~~~~~~I~r~~ 88 (305)
T 3ih1_A 25 VEANEIL-QIPGAHDA----MAALVARNTGFLALYLSGAAYTASKGLPDL-----------GIVTSTEVAERARDLVRAT 88 (305)
T ss_dssp HHSSSCE-EEEBCSSH----HHHHHHHHTTCSCEEECHHHHHHHHTCCSS-----------SCSCHHHHHHHHHHHHHHH
T ss_pred HhCCCcE-EEecCcCH----HHHHHHHHcCCCEEEECcHHHHHhCCCCCC-----------CcCCHHHHHHHHHHHHHhc
Confidence 3344443 34555565 377888999999887753 33331 1234555666667777777
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcCCCcEE
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDFPDLTF 270 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~~~iPV 270 (436)
++||.+=+..|+.. .+++.+.+. .++++|+++|.+-+... ...|.. ....+-+.. .+-+..+++.-.+.-|
T Consensus 89 ~~pviaD~d~Gyg~---~~~v~~~v~-~l~~aGaagv~iED~~~~krcGh~--~gk~l~~~~e~~~rI~Aa~~A~~~~~I 162 (305)
T 3ih1_A 89 DLPVLVDIDTGFGG---VLNVARTAV-EMVEAKVAAVQIEDQQLPKKCGHL--NGKKLVTTEELVQKIKAIKEVAPSLYI 162 (305)
T ss_dssp CCCEEEECTTCSSS---HHHHHHHHH-HHHHTTCSEEEEECBCSSCCTTCT--TCCCBCCHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCEEEECCCCCCC---HHHHHHHHH-HHHHhCCcEEEECCCCCCcccCCC--CCCcccCHHHHHHHHHHHHHcCCCeEE
Confidence 89999999988633 445555444 44569999999976542 111211 111222221 2233444444334555
Q ss_pred EEeCCCCC-------HHHHHHHHHcCCCeeee
Q 013784 271 TLNGGINT-------VDEVNAALRKGAHHVMV 295 (436)
Q Consensus 271 IanGgI~s-------~~da~~~l~~Gad~Vmi 295 (436)
++=-|-.. .++++++.+.|||+|.+
T Consensus 163 ~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 163 VARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp EEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEeeccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 55555431 23333444589999998
No 292
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.22 E-value=0.03 Score=54.46 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=28.5
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 266 PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 266 ~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+++||.++||| +.+.+.++.++|+|++.+|+.....|++
T Consensus 248 ~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 248 KHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp -CCEEEEECCC-CC------CCCSCSEEECGGGTSSCCCC
T ss_pred CCeEEEEECCC-CHHHHHHHHHcCCCEEEEechhcCCCCC
Confidence 35999999999 9999999999999999999987666765
No 293
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.09 E-value=0.81 Score=43.80 Aligned_cols=156 Identities=12% Similarity=0.123 Sum_probs=90.4
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEeccccchhhhhcccc-----hhhhhc----c--CCCCCcEEEEEc-C--CCHHHHHH
Q 013784 76 MMDWTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGN-----LDRFLA----F--SPEQHPIVLQIG-G--SNLDNLAK 141 (436)
Q Consensus 76 Magvtd~~fr~~~~~~Gg~gl~~temv~~~~l~~~~~~-----~~~~~~----~--~~~~~pi~vQL~-g--~~p~~~~~ 141 (436)
|.+.-|..+.+++.++| .+.+.++--... ...+.+. .+.++. + .....|+++=+= | .++++..+
T Consensus 33 m~tayDa~sA~l~e~aG-~d~ilvGdSl~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 33 MLTCYDASFAALLDRAN-VDVQLIGDSLGN-VLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEECCSHHHHHHHHHTT-CSEEEECTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEeCcCHHHHHHHHHcC-CCEEEECcHHHH-HHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 55888999999998886 888877632211 1111111 111111 1 112356777763 3 57888888
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc---------CCCCC----
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI---------GVDDH---- 208 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~---------G~~~~---- 208 (436)
.+.++.+.|+++|.|--|- ...+.++++++ .|+|+.--+.+ |+...
T Consensus 111 ~a~rl~kaGa~aVklEdg~--------------------~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~vqgrt~ 169 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE--------------------WLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKVQGKTE 169 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG--------------------GGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---CCCCSH
T ss_pred HHHHHHHcCCCEEEECCch--------------------hHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeEEEcCCH
Confidence 7777766799999776430 12344555544 37776533221 22111
Q ss_pred CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 209 DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 209 ~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
+..+++.+. ++.++++|++.|.+-+-. -+...++.+.. ++|+|+-|
T Consensus 170 ~~a~~~i~r-A~a~~eAGA~~ivlE~vp------------------~~~a~~It~~l-~iP~igIG 215 (275)
T 3vav_A 170 AGAAQLLRD-ARAVEEAGAQLIVLEAVP------------------TLVAAEVTREL-SIPTIGIG 215 (275)
T ss_dssp HHHHHHHHH-HHHHHHHTCSEEEEESCC------------------HHHHHHHHHHC-SSCEEEES
T ss_pred HHHHHHHHH-HHHHHHcCCCEEEecCCC------------------HHHHHHHHHhC-CCCEEEEc
Confidence 124455554 566788999999986432 23455666665 89999876
No 294
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.09 E-value=0.16 Score=47.76 Aligned_cols=142 Identities=13% Similarity=0.142 Sum_probs=78.0
Q ss_pred CcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc--cC--Cc--E
Q 013784 125 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TN--VP--V 197 (436)
Q Consensus 125 ~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~--~~--iP--v 197 (436)
.++++=+- +-.|+....+++.+.++|+|.|.+|.-. | .+.+.+.++.+++. .| .| +
T Consensus 56 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~-----------g------~~~l~~~~~~~~~~~~~G~~~~~~l 118 (246)
T 2yyu_A 56 HAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAG-----------G------RRMMEAAIEGLDAGTPSGRMRPRCI 118 (246)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG-----------C------HHHHHHHHHHHHHHSCSSSCCCEEE
T ss_pred CeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCC-----------C------HHHHHHHHHHHHhhcccCCcCCCEE
Confidence 34443332 3557777777888889999999998521 1 22345666666652 33 34 3
Q ss_pred EEEeccCC--CCC-------CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCc
Q 013784 198 SVKCRIGV--DDH-------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL 268 (436)
Q Consensus 198 svKiR~G~--~~~-------~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~i 268 (436)
.+...... .+. .+..+....+++...+.|.+.++... ++ +.++.+.....
T Consensus 119 av~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------------~e-i~~lr~~~~~~ 177 (246)
T 2yyu_A 119 AVTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA--------------------NE-AAFIKERCGAS 177 (246)
T ss_dssp EESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH--------------------HH-HHHHHHHHCTT
T ss_pred EEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH--------------------HH-HHHHHHhcCCC
Confidence 33322221 000 11112221222223345666654321 22 33443333234
Q ss_pred EEEEeCCCCCH-H---------HHHHHHHcCCCeeeehHHHHhCCc
Q 013784 269 TFTLNGGINTV-D---------EVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 269 PVIanGgI~s~-~---------da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+++..|||.-- . .+.++++.|||.+.+||+++..++
T Consensus 178 ~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 178 FLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp SEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTSSS
T ss_pred CEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCCCC
Confidence 58999999742 1 367777899999999999998665
No 295
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=94.05 E-value=4.4 Score=38.81 Aligned_cols=145 Identities=16% Similarity=0.134 Sum_probs=90.4
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++-.+.++.++++|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=-
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~-------~----~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 71 KDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV--TPFYY-------K----FSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS-------C----CCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 456799999999999999999999999999998775 34421 1 2346677788888888889987754
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINT 278 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s 278 (436)
|.|.+- +.+.+ .++++.-.+-+|--.. | ++..+.++++..+++. +.+|+=
T Consensus 138 ~P~~tg~~l--~~~~~----~~La~~pnIvgiK~s~------g------------d~~~~~~~~~~~~~f~-v~~G~d-- 190 (293)
T 1f6k_A 138 IPFLTGVNM--GIEQF----GELYKNPKVLGVKFTA------G------------DFYLLERLKKAYPNHL-IWAGFD-- 190 (293)
T ss_dssp CHHHHCCCC--CHHHH----HHHHTSTTEEEEEECS------C------------CHHHHHHHHHHCTTSE-EEECCG--
T ss_pred CccccCcCC--CHHHH----HHHhcCCCEEEEEECC------C------------CHHHHHHHHHhCCCeE-EEECcH--
Confidence 455443 23333 3333322233332211 1 1444455554433554 445542
Q ss_pred HHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 279 VDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 279 ~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
+.+...+..|++|++.|.+-+ -|..+.+
T Consensus 191 -~~~~~~l~~G~~G~is~~~n~-~P~~~~~ 218 (293)
T 1f6k_A 191 -EMMLPAASLGVDGAIGSTFNV-NGVRARQ 218 (293)
T ss_dssp -GGHHHHHHTTCSEEEESTHHH-HHHHHHH
T ss_pred -HHHHHHHHCCCcEEEeCHHHh-hHHHHHH
Confidence 236667778999999998865 3555433
No 296
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.01 E-value=0.039 Score=57.17 Aligned_cols=65 Identities=22% Similarity=0.252 Sum_probs=50.1
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
+++.++|+|.|.+++- .|.. ...++.+..+.+.++++||+ .|+|.+.+++.++++.|||+|.+|.
T Consensus 239 ~~l~~~G~d~ivi~~a----~g~~--------~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 239 EALFEAGADAIVIDTA----HGHS--------AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHTCSEEEECCS----CTTC--------HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHcCCCeEEEeee----cCcc--------hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcCCCEEEECc
Confidence 3445689999999862 1211 11266777777776789999 9999999999999999999998883
No 297
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.95 E-value=0.45 Score=45.53 Aligned_cols=53 Identities=8% Similarity=0.075 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
+.+...+-|+...+.|+|.||||++++. . ..++.+..+++++++.+++||++=
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~-------~------eE~~rv~~vi~~l~~~~~~pisID 84 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTA-------D------DPVRVMEWLVKTIQEVVDLPCCLD 84 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCS-------S------CHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCc-------h------hHHHHHHHHHHHHHHhCCCeEEEe
Confidence 3455566666677889999999987742 1 468889999999999889999873
No 298
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=93.88 E-value=0.37 Score=44.71 Aligned_cols=140 Identities=13% Similarity=0.147 Sum_probs=83.9
Q ss_pred CC-cEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCC-CCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 124 QH-PIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCP-SPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 124 ~~-pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP-~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
+. ++++=+=-+| |.....+++.+.++ |.+.+|.... .. .+...++...+ .+.-|++-
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~--d~vTVh~~~G~~~-----------------~~~~a~~~~~~-~~~~v~vL 111 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA--NSFIAHSFIGVKG-----------------SLDELKRYLDA-NSKNLYLV 111 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC--SEEEEESTTCTTT-----------------THHHHHHHHHH-TTCEEEEE
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC--CEEEEEcCcCcHH-----------------HHHHHHHHHHh-cCCcEEEE
Confidence 55 7777775555 45555566655555 8998886433 21 13344444332 23456666
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH-
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV- 279 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~- 279 (436)
...+..+.... ....++++++++|+|.+++.+.. -+.+..+.+..++ -++..+||.-.
T Consensus 112 ts~s~~~~~~~--~~~~~a~~a~~~g~~GvV~sat~------------------p~e~~~ir~~~~~-~~~vtPGI~~~g 170 (222)
T 4dbe_A 112 AVMSHEGWSTL--FADYIKNVIREISPKGIVVGGTK------------------LDHITQYRRDFEK-MTIVSPGMGSQG 170 (222)
T ss_dssp EECSSTTCCCT--THHHHHHHHHHHCCSEEEECTTC------------------HHHHHHHHHHCTT-CEEEECCBSTTS
T ss_pred EeCCCcchHHH--HHHHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHhCCC-CEEEcCCcccCc
Confidence 66543322111 11234667778999999876432 1223344444556 57888998642
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCc
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
.+..++++.|+|.+.|||+++.-++
T Consensus 171 ~tp~~a~~~Gad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 171 GSYGDAVCAGADYEIIGRSIYNAGN 195 (222)
T ss_dssp BCTTHHHHHTCSEEEECHHHHTSSS
T ss_pred cCHHHHHHcCCCEEEECHHhcCCCC
Confidence 1466777899999999999998765
No 299
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=93.87 E-value=0.73 Score=45.90 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=87.6
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC---CcEEEEe
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN---VPVSVKC 201 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~---iPvsvKi 201 (436)
-|+...+.+.+++.+.+.++.+.+.||..+.+..|. .+++.-.+.++++++.+| +.+.+-.
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~----------------~~~~~d~~~v~avr~~~g~~~~~l~vDa 215 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA----------------IDFDKECALLAGIRESFSPQQLEIRVDA 215 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC-------------------CHHHHHHHHHHHHHHSCTTTCEEEEEC
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC----------------CChHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 355555667789988888887778899999876442 245666778888888765 4455544
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDE 281 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~d 281 (436)
.-+|+. +++ .++ .+.+++.++.+|- . .+++.+++...++.+.. ++||.+.=.+.+..+
T Consensus 216 N~~~~~-~~a---~~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~ 273 (377)
T 2pge_A 216 NGAFSP-ANA---PQR-LKRLSQFHLHSIE----Q------------PIRQHQWSEMAALCANS-PLAIALDEELIGLGA 273 (377)
T ss_dssp TTBBCT-TTH---HHH-HHHHHTTCCSEEE----C------------CBCSSCHHHHHHHHHHC-SSCEEESGGGTTCCT
T ss_pred CCCCCH-HHH---HHH-HHHHhcCCCcEEE----c------------cCCcccHHHHHHHHhhC-CCcEEECCccCCcch
Confidence 445643 233 333 3456778877665 1 12223477777777765 899998888888777
Q ss_pred --HHHHHH-cCCCeeee
Q 013784 282 --VNAALR-KGAHHVMV 295 (436)
Q Consensus 282 --a~~~l~-~Gad~Vmi 295 (436)
+.++++ ..+|.|++
T Consensus 274 ~~~~~~i~~~a~d~i~i 290 (377)
T 2pge_A 274 EQRSAMLDAIRPQYIIL 290 (377)
T ss_dssp HHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHhCCCCEEEE
Confidence 668887 56788774
No 300
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=93.85 E-value=0.33 Score=47.53 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=59.2
Q ss_pred HHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHH
Q 013784 184 EAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALL 262 (436)
Q Consensus 184 eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~ 262 (436)
+.++++++.. ..++.|-+ ++++++.+. + ++|+|.|-+..-+ .+.+.+++
T Consensus 220 ~Av~~ar~~~p~~kIeVEV-------dtldea~eA----l-~aGaD~I~LDn~~------------------~~~l~~av 269 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEVET-------ETLAELEEA----I-SAGADIIMLDNFS------------------LEMMREAV 269 (320)
T ss_dssp HHHHHHHHHSTTSCEEEEE-------SSHHHHHHH----H-HTTCSEEEEESCC------------------HHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEE-------CCHHHHHHH----H-HcCCCEEEECCCC------------------HHHHHHHH
Confidence 4455555543 34554422 345555442 2 3799999885311 33444444
Q ss_pred hcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 263 RDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 263 ~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
+.. .++++.++||| +.+.+.++.++|+|.+.+|.-...-|++
T Consensus 270 ~~l~~~v~ieaSGGI-t~~~I~~~a~tGVD~isvGalt~sa~~l 312 (320)
T 3paj_A 270 KINAGRAALENSGNI-TLDNLKECAETGVDYISVGALTKHLKAL 312 (320)
T ss_dssp HHHTTSSEEEEESSC-CHHHHHHHHTTTCSEEECTHHHHSBCCC
T ss_pred HHhCCCCeEEEECCC-CHHHHHHHHHcCCCEEEECceecCCCcc
Confidence 332 37999999999 6899999999999999999966555654
No 301
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.69 E-value=0.082 Score=49.77 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=78.1
Q ss_pred CcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCC--c--EEE
Q 013784 125 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV--P--VSV 199 (436)
Q Consensus 125 ~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i--P--vsv 199 (436)
.++++=+- +-.|+....+++.+.++|+|.|.+|.-. | .+.+..+++.+++. |. | +.+
T Consensus 66 ~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~-----------g------~~~l~~~~~~~~~~-G~~~~~~l~v 127 (245)
T 1eix_A 66 FDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG-----------G------ARMMTAAREALVPF-GKDAPLLIAV 127 (245)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG-----------C------HHHHHHHHHTTGGG-GGGCCEEEEE
T ss_pred CcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC-----------C------HHHHHHHHHHHHHc-CCCCCcEEEE
Confidence 34443332 3557776677778888999999998521 1 12345556655543 32 3 122
Q ss_pred EeccCCC--CC------CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEE
Q 013784 200 KCRIGVD--DH------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 271 (436)
Q Consensus 200 KiR~G~~--~~------~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVI 271 (436)
....... .. .+..+....++....+.|.+.++... ++ +.++.+...+.+++
T Consensus 128 ~~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------------~e-i~~lr~~~~~~~i~ 186 (245)
T 1eix_A 128 TVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA--------------------QE-AVRFKQVFGQEFKL 186 (245)
T ss_dssp CSCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG--------------------GG-HHHHHHHHCSSSEE
T ss_pred EecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH--------------------HH-HHHHHHhcCCCCEE
Confidence 2212110 00 11222222223324456777655321 22 33333333345799
Q ss_pred EeCCCCCHH----------HHHHHHHcCCCeeeehHHHHhCCc
Q 013784 272 LNGGINTVD----------EVNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 272 anGgI~s~~----------da~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
..|||..-. .+.++++.|||.+.+||+++..++
T Consensus 187 v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 187 VTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp EECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHHHTSSS
T ss_pred EECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHHcCCCC
Confidence 999997421 467788899999999999988665
No 302
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.68 E-value=0.26 Score=45.66 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=59.6
Q ss_pred CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 195 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 195 iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
.|+..-+|. ++.+....+ ++.+.+.|++.|.+.-|+. ...+.+.++++++++ ++|+.|
T Consensus 13 ~~vi~Vir~--~~~~~a~~~----a~al~~gGi~~iEvt~~t~---------------~a~~~I~~l~~~~p~-~~IGAG 70 (217)
T 3lab_A 13 KPLIPVIVI--DDLVHAIPM----AKALVAGGVHLLEVTLRTE---------------AGLAAISAIKKAVPE-AIVGAG 70 (217)
T ss_dssp CSEEEEECC--SCGGGHHHH----HHHHHHTTCCEEEEETTST---------------THHHHHHHHHHHCTT-SEEEEE
T ss_pred CCEEEEEEc--CCHHHHHHH----HHHHHHcCCCEEEEeCCCc---------------cHHHHHHHHHHHCCC-CeEeec
Confidence 466666775 333334333 4456679999999976653 127788888888865 799999
Q ss_pred CCCCHHHHHHHHHcCCCeeee
Q 013784 275 GINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~Vmi 295 (436)
-|.|.++++++++.||+.++.
T Consensus 71 TVlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 71 TVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp CCCSHHHHHHHHHHTCSEEEE
T ss_pred cccCHHHHHHHHHcCCCEEEe
Confidence 999999999999999999976
No 303
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=93.58 E-value=5.4 Score=38.26 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=108.9
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+.-..+++++. +.|-.|+++.+...--......++ ++...+......|+++++.+++.++-.+.++.+++.|+|
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 55566777763 344345555443322111111111 111222234567999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
++-+- .|.-. + -..+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++.+.-.+-+
T Consensus 105 avlv~--~P~y~--~---------~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~~pnivg 165 (297)
T 3flu_A 105 YTLSV--VPYYN--K---------PSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSM--TNDTI----LRLAEIPNIVG 165 (297)
T ss_dssp EEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCC--CHHHH----HHHTTSTTEEE
T ss_pred EEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEECCchhccCC--CHHHH----HHHHcCCCEEE
Confidence 98764 34421 1 2345677888888888899987753 445443 23222 33433222322
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
|--.. | ++..+.++++.. .++.| .+|+ -+.+...+..|++|+..+.+-+ .|..+.+
T Consensus 166 iKdss------g------------d~~~~~~~~~~~~~~f~v-~~G~---d~~~l~~l~~G~~G~is~~an~-~P~~~~~ 222 (297)
T 3flu_A 166 VKEAS------G------------NIGSNIELINRAPEGFVV-LSGD---DHTALPFMLCGGHGVITVAANA-APKLFAD 222 (297)
T ss_dssp EEECS------C------------CHHHHHHHHHHSCTTCEE-EECC---GGGHHHHHHTTCCEEEESGGGT-CHHHHHH
T ss_pred EEeCC------C------------CHHHHHHHHHhcCCCeEE-EECc---HHHHHHHHhCCCCEEEechHhh-hHHHHHH
Confidence 22110 1 145555665544 24544 5663 2335567778999999888765 4666544
Q ss_pred hhh
Q 013784 309 HVD 311 (436)
Q Consensus 309 ~~~ 311 (436)
-.+
T Consensus 223 l~~ 225 (297)
T 3flu_A 223 MCR 225 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 304
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.53 E-value=0.8 Score=42.64 Aligned_cols=142 Identities=16% Similarity=0.160 Sum_probs=80.0
Q ss_pred CcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc--cCC--c--E
Q 013784 125 HPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TNV--P--V 197 (436)
Q Consensus 125 ~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~--~~i--P--v 197 (436)
.++++=+- +-.|+....+++.+.++|+|.|.+|.-. | .+.+.++++.+++. .|. | +
T Consensus 55 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~-----------g------~~~l~~~~~~~~~~~~~g~~~~~~~ 117 (239)
T 1dbt_A 55 CELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAG-----------G------KKMMQAALEGLEEGTPAGKKRPSLI 117 (239)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG-----------C------HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcC-----------C------HHHHHHHHHHHHhhhccCCCCccEE
Confidence 34443332 3557777777788889999999998521 1 12344556666553 143 4 4
Q ss_pred EEEeccCCC--C------C-CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCc
Q 013784 198 SVKCRIGVD--D------H-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL 268 (436)
Q Consensus 198 svKiR~G~~--~------~-~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~i 268 (436)
.|-...... . . .+..+....+++...+.|.+.++... + .+.++.+...+.
T Consensus 118 ~V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~-~--------------------~i~~lr~~~~~~ 176 (239)
T 1dbt_A 118 AVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV-H--------------------EAKAIYQAVSPS 176 (239)
T ss_dssp EECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG-G--------------------GHHHHTTTSCTT
T ss_pred EEEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH-H--------------------HHHHHHHhcCCC
Confidence 443333221 0 0 01122222223333457777765433 1 112233333346
Q ss_pred EEEEeCCCCCHHH----------HHHHHHcCCCeeeehHHHHhCCc
Q 013784 269 TFTLNGGINTVDE----------VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 269 PVIanGgI~s~~d----------a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
+++..|||.--.. ..++++.|||.+.+||+++..|+
T Consensus 177 ~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 177 FLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAED 222 (239)
T ss_dssp CEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSC
T ss_pred cEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCCCC
Confidence 7999999975322 26778899999999999987665
No 305
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=93.44 E-value=5.8 Score=38.18 Aligned_cols=195 Identities=15% Similarity=0.163 Sum_probs=109.2
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
++.|+. .+....++.++. ..|-.|+++.+...--..+...++ ++...+......|+++++.+++.++..+.
T Consensus 19 ~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~l 98 (303)
T 2wkj_A 19 LLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQL 98 (303)
T ss_dssp CCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHH
T ss_pred eEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHH
Confidence 445663 255566777763 344335555443221111111111 11122223356799999999999999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEe---ccCCCCCCcHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKC---RIGVDDHDSYNQLCDFI 218 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKi---R~G~~~~~~~~~~~~~l 218 (436)
++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.++++ +||.+=- |.|.+- +.+.+
T Consensus 99 a~~A~~~Gadavlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l--~~~~~---- 159 (303)
T 2wkj_A 99 AASAKRYGFDAVSAV--TPFYY-------P----FSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKL--TLDQI---- 159 (303)
T ss_dssp HHHHHHHTCSEEEEE--CCCSS-------C----CCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCC--CHHHH----
T ss_pred HHHHHhCCCCEEEec--CCCCC-------C----CCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCC--CHHHH----
Confidence 999999999998765 34421 1 234667788888888888 9987643 455443 23333
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
.++++.-.+.+|--.. | ++..+.++++..+++. +.+|+ | +.+...+..|++|++.|.+
T Consensus 160 ~~La~~pnIvgiK~s~------g------------d~~~~~~~~~~~~~f~-v~~G~--d-~~~~~~l~~G~~G~is~~a 217 (303)
T 2wkj_A 160 NTLVTLPGVGALXQTS------G------------DLYQMEQIRREHPDLV-LYNGY--D-NIFASGLLAGADGGIGSTY 217 (303)
T ss_dssp HHHHTSTTEEEEEECC------C------------CHHHHHHHHHHCTTCE-EEECC--G-GGHHHHHHHTCCEEEETTH
T ss_pred HHHhcCCCEEEEeCCC------C------------CHHHHHHHHHhCCCeE-EEeCc--H-HHHHHHHHCCCCEEEeCHH
Confidence 3333322233332211 1 1444445554333454 44554 1 2356677789999999988
Q ss_pred HHhCCcchhh
Q 013784 299 AYQNPWYTLG 308 (436)
Q Consensus 299 ~l~~P~lf~~ 308 (436)
-+ -|..+.+
T Consensus 218 n~-~P~~~~~ 226 (303)
T 2wkj_A 218 NI-MGWRYQG 226 (303)
T ss_dssp HH-HHHHHHH
T ss_pred Hh-CHHHHHH
Confidence 75 3555433
No 306
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=93.43 E-value=0.28 Score=48.25 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCC--ccEEEEccCcccccCCCCCCCCCCCCccHHHH
Q 013784 181 FVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSP--TRHFIIHSRKALLNGISPAENRTIPPLKYEYY 258 (436)
Q Consensus 181 ~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~G--vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v 258 (436)
...+.++.+++ .++|+++-+ |... + ++ +. ++.+.+.| ++.|.++.. .|. +...++.+
T Consensus 82 ~~~~~i~~~~~-~g~~v~v~~--g~~~-~---~~-~~-a~~~~~~g~~~~~i~i~~~----~G~--------~~~~~~~i 140 (336)
T 1ypf_A 82 KRISFIRDMQS-RGLIASISV--GVKE-D---EY-EF-VQQLAAEHLTPEYITIDIA----HGH--------SNAVINMI 140 (336)
T ss_dssp GHHHHHHHHHH-TTCCCEEEE--CCSH-H---HH-HH-HHHHHHTTCCCSEEEEECS----SCC--------SHHHHHHH
T ss_pred HHHHHHHHHHh-cCCeEEEeC--CCCH-H---HH-HH-HHHHHhcCCCCCEEEEECC----CCC--------cHHHHHHH
Confidence 34555555543 366777763 4432 1 11 22 23345678 999887541 121 12347788
Q ss_pred HHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee
Q 013784 259 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 259 ~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi 295 (436)
..+++..+.+||+ .|.|.+.++++++.+.|||+|.+
T Consensus 141 ~~lr~~~~~~~vi-~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 141 QHIKKHLPESFVI-AGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhCCCCEEE-ECCcCCHHHHHHHHHcCCCEEEE
Confidence 8888876445555 57799999999999999999999
No 307
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.40 E-value=6.1 Score=38.31 Aligned_cols=197 Identities=11% Similarity=0.078 Sum_probs=111.0
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhh-hhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETI-IYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAK 141 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l-~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~ 141 (436)
++.|+. .+.-..+++++. ..|-.|+++.+ .+-+.. +...++ ++...+......|+++.+.+++.++-.+
T Consensus 30 lvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~G-tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~ 108 (315)
T 3si9_A 30 LITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVG-TTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVE 108 (315)
T ss_dssp CCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHH
T ss_pred eECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCc-cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHH
Confidence 444553 255567777763 33433455444 332321 111111 1112222345679999999999999999
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFI 218 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~l 218 (436)
.++.+++.|+|++-+- .|.-. + ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+
T Consensus 109 la~~A~~~Gadavlv~--~P~y~--~---------~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~---- 169 (315)
T 3si9_A 109 LAKHAEKAGADAVLVV--TPYYN--R---------PNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDM--AVETM---- 169 (315)
T ss_dssp HHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC--CHHHH----
T ss_pred HHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCC--CHHHH----
Confidence 9999999999998764 44421 1 2346678888888888899987753 445443 23332
Q ss_pred HHHhhc-CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 219 YKVSSL-SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 219 a~~~e~-~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.+++++ -.+-+|--.. | ++..+.++++.. .++.| .+|+= +.+...+..|++|++.+
T Consensus 170 ~~La~~~pnIvgiKdss------g------------d~~~~~~l~~~~~~~f~v-~~G~d---~~~l~~l~~G~~G~is~ 227 (315)
T 3si9_A 170 RDLCRDFKNIIGVKDAT------G------------KIERASEQREKCGKDFVQ-LSGDD---CTALGFNAHGGVGCISV 227 (315)
T ss_dssp HHHHHHCTTEEEEEECS------C------------CTHHHHHHHHHHCSSSEE-EESCG---GGHHHHHHTTCCEEEES
T ss_pred HHHHhhCCCEEEEEeCC------C------------CHHHHHHHHHHcCCCeEE-EecCH---HHHHHHHHcCCCEEEec
Confidence 334442 2333333211 1 133334444332 24544 66752 23456677899999988
Q ss_pred HHHHhCCcchhhhhh
Q 013784 297 RAAYQNPWYTLGHVD 311 (436)
Q Consensus 297 Ra~l~~P~lf~~~~~ 311 (436)
.+-+ .|..+.+-.+
T Consensus 228 ~an~-~P~~~~~l~~ 241 (315)
T 3si9_A 228 SSNV-APKLCAQLHA 241 (315)
T ss_dssp GGGT-CHHHHHHHHH
T ss_pred HHHh-hHHHHHHHHH
Confidence 8764 3666544333
No 308
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=93.38 E-value=0.19 Score=48.55 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=61.2
Q ss_pred HHHHHHHhhccC-CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 183 GEAMSVIAANTN-VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 183 ~eiv~av~~~~~-iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
.+.++++++..+ .++.|-+. +.+++.+ . .++|+|.|-+|..+. . .-.+.+..+
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~-------t~eea~e----a-l~aGaD~I~LDn~~~-------~-------~~~~~v~~l 235 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD-------SLEQLDA----V-LPEKPELILLDNFAV-------W-------QTQTAVQRR 235 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES-------SHHHHHH----H-GGGCCSEEEEETCCH-------H-------HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEeC-------CHHHHHH----H-HHcCCCEEEECCCCH-------H-------HHHHHHHHh
Confidence 345555555432 24544332 3444433 2 348999998875321 0 001233333
Q ss_pred HhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 262 LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 262 ~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
....++++|.++||| +++.+.+..++|+|.+.+|+....-|++
T Consensus 236 ~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~~a~~~ 278 (284)
T 1qpo_A 236 DSRAPTVMLESSGGL-SLQTAATYAETGVDYLAVGALTHSVRVL 278 (284)
T ss_dssp HHHCTTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTSSBCCC
T ss_pred hccCCCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHcCCCCc
Confidence 333457899999999 7899999999999999999977766764
No 309
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=93.29 E-value=0.089 Score=54.70 Aligned_cols=62 Identities=24% Similarity=0.273 Sum_probs=47.8
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++|+|.|.++... |.+ ...++.+.++++.++++||++ |++.+.+++.++.+.|||+|.+|
T Consensus 237 l~~aG~d~I~id~a~----g~~--------~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 237 LVAAGVDVVVVDTAH----GHS--------KGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHTTCSEEEEECSC----CSB--------HHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HhhcccceEEecccC----Ccc--------hhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 345899999997432 211 112567778888777899887 88999999999999999999985
No 310
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=93.24 E-value=0.087 Score=50.91 Aligned_cols=96 Identities=10% Similarity=0.111 Sum_probs=61.9
Q ss_pred HHHHHHHHhhccC--CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccH-HHH
Q 013784 182 VGEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY-EYY 258 (436)
Q Consensus 182 l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~-~~v 258 (436)
+.+.++++++..+ .+|.|-+ ++.+++.+. .++|+|.|-++.-+. ..+ +.+
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV-------~tleea~eA-----~~aGaD~I~LDn~~~---------------e~l~~av 231 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEV-------ENLEDALRA-----VEAGADIVMLDNLSP---------------EEVKDIS 231 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEE-------SSHHHHHHH-----HHTTCSEEEEESCCH---------------HHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEe-------CCHHHHHHH-----HHcCCCEEEECCCCH---------------HHHHHHH
Confidence 3456666666543 4454431 245554442 348999998875221 011 222
Q ss_pred HHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 259 YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 259 ~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
..+....+++|+.++||| +.+.+.+..++|+|++.+|+....-|++
T Consensus 232 ~~l~~~~~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 232 RRIKDINPNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp HHHHHHCTTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTSSCCCC
T ss_pred HHhhccCCCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHcCCCCc
Confidence 223222347999999999 6799998888999999999988777765
No 311
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.22 E-value=0.1 Score=54.47 Aligned_cols=65 Identities=15% Similarity=0.288 Sum_probs=48.5
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
.+.++|+|.|++..-. |.+.. -.+.+..+++.+++++|| .|.|.+.+.++.+++.|||+|-+|-|
T Consensus 288 aLv~AGvD~iviD~ah----Ghs~~--------v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li~aGAD~vkVGiG 352 (556)
T 4af0_A 288 LLAEAGLDVVVLDSSQ----GNSVY--------QIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLIAAGADGLRIGMG 352 (556)
T ss_dssp HHHHTTCCEEEECCSC----CCSHH--------HHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHhcCCcEEEEeccc----cccHH--------HHHHHHHHHhhCCcceEE-eccccCHHHHHHHHHcCCCEEeecCC
Confidence 3446999999985322 32210 156677777788888865 68999999999999999999988764
No 312
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=93.20 E-value=2.1 Score=40.05 Aligned_cols=189 Identities=14% Similarity=0.163 Sum_probs=101.6
Q ss_pred CcEEEcCCCCC-ChHHHHHHHHHcCC-CcE--EEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCC-HHHHHHHH
Q 013784 69 PWFSVAPMMDW-TDNHYRTLARLISK-HAW--LYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN-LDNLAKAT 143 (436)
Q Consensus 69 n~iilAPMagv-td~~fr~~~~~~Gg-~gl--~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~-p~~~~~aA 143 (436)
.++++| .++ +-.....++.+.++ ... +.++++...+. .-++.+.+ .+.++++=+--+| |.....++
T Consensus 9 ~~LivA--LD~~~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~----~~v~~L~~---~g~~iflDlK~~DI~nTv~~~~ 79 (239)
T 3tr2_A 9 PKVIVA--IDAGTVEQARAQINPLTPELCHLKIGSILFTRYGP----AFVEELMQ---KGYRIFLDLKFYDIPQTVAGAC 79 (239)
T ss_dssp CCEEEE--CCCSSHHHHHHHHTTCCTTTCEEEEEHHHHHHHHH----HHHHHHHH---TTCCEEEEEEECSCHHHHHHHH
T ss_pred CCeEEE--eCCCCHHHHHHHHHHhCCcccEEEeCHHHHHhhCH----HHHHHHHh---cCCCEEEEecccccchHHHHHH
Confidence 455655 234 33345555666653 233 34555543322 11222222 3567777775444 66666778
Q ss_pred HHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCc----EEEEeccCCC------CCCcH
Q 013784 144 ELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVP----VSVKCRIGVD------DHDSY 211 (436)
Q Consensus 144 ~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iP----vsvKiR~G~~------~~~~~ 211 (436)
+.+.++|+|.+.+|.. |+ .+.+...+++..+.- +.| |++.+..+-. ...++
T Consensus 80 ~~~~~~gad~vTvh~~------------~G-----~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~~~~ 142 (239)
T 3tr2_A 80 RAVAELGVWMMNIHIS------------GG-----RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQEKV 142 (239)
T ss_dssp HHHHHTTCSEEEEEGG------------GC-----HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCCSCH
T ss_pred HHHHhCCCCEEEEecc------------CC-----HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCCCCH
Confidence 8889999999999852 11 234455555544321 123 2222222100 01234
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH-H---------
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD-E--------- 281 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~-d--------- 281 (436)
.+....+++...++|++.+++++.+. ..+.+....-.++...||.-.. +
T Consensus 143 ~~~v~~~A~~a~~~g~~GvV~s~~e~---------------------~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t 201 (239)
T 3tr2_A 143 PDIVCRMATLAKSAGLDGVVCSAQEA---------------------ALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMT 201 (239)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCHHHH---------------------HHHHTTCCTTSEEEECCBC----------CCBC
T ss_pred HHHHHHHHHHHHHcCCCEEEECchhH---------------------HHHHHhcCCCcEEECCCcCCCCCCcCcccccCC
Confidence 44444456677778999998765331 1222222222356677776321 1
Q ss_pred HHHHHHcCCCeeeehHHHHhCCc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
..++++.|||.+.+||+++..++
T Consensus 202 ~~~~~~aGad~lVvGr~I~~a~d 224 (239)
T 3tr2_A 202 PRAAIQAGSDYLVIGRPITQSTD 224 (239)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHcCCCEEEEChHHhCCCC
Confidence 44677899999999999988665
No 313
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=93.17 E-value=0.51 Score=43.39 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=74.6
Q ss_pred CCcEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 124 QHPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
+.++++=+--+| +.....+++.+.++|+|.+.+|... |. +.+..+++... ..-+.|-.-
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~~-----------G~------~~l~~~~~~~~---~~~~~V~~l 117 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCA-----------GY------ESVERALSATD---KHVFVVVKL 117 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGG-----------CH------HHHHHHHHHCS---SEEEEECCC
T ss_pred CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEeccC-----------CH------HHHHHHHHhcC---CCeEEEEEe
Confidence 567777774443 5666677788888999999998411 21 22333333221 111222222
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH--
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD-- 280 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~-- 280 (436)
..... . +.+....++++ .+.|+| ++..+ +.+..+.+.. ..| +..+||.-..
T Consensus 118 ts~~~-~-l~~~v~~~a~~-~e~G~d-vV~~~---------------------~~~~~ir~~~-~~~-~v~pGI~~~~~~ 170 (213)
T 1vqt_A 118 TSMEG-S-LEDYMDRIEKL-NKLGCD-FVLPG---------------------PWAKALREKI-KGK-ILVPGIRMEVKA 170 (213)
T ss_dssp TTSCC-C-HHHHHHHHHHH-HHHTCE-EECCH---------------------HHHHHHTTTC-CSC-EEECCBC-----
T ss_pred CCCCH-H-HHHHHHHHHHH-hcCCCE-EEEcH---------------------HHHHHHHHHC-CCC-EEECCCCCCCCc
Confidence 22222 1 32333445667 778999 54321 1223343333 346 8888885322
Q ss_pred -H------HHHHHHcCCCeeeehHHHHhCCc
Q 013784 281 -E------VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 281 -d------a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
| ..+ ++.|||.+.+||+++..++
T Consensus 171 ~dq~rv~t~~~-i~aGad~iVvGR~I~~a~d 200 (213)
T 1vqt_A 171 DDQKDVVTLEE-MKGIANFAVLGREIYLSEN 200 (213)
T ss_dssp ----CCBCHHH-HTTTCSEEEESHHHHTSSC
T ss_pred cchhhcCCHHH-HHCCCCEEEEChhhcCCCC
Confidence 1 567 7899999999999997766
No 314
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=93.08 E-value=0.56 Score=47.15 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=82.8
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG 204 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G 204 (436)
|+..-+...+++.+++.++.+.+.||..+-+..|.+.... +. . ..++.-.+.+++||+.++ ..+.+=.--+
T Consensus 156 ~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~---~~-~----~~~~~di~~v~avR~a~~d~~L~vDaN~~ 227 (393)
T 3u9i_A 156 ETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA---TT-I----RTMEHDLARIVAIRDVAPTARLILDGNCG 227 (393)
T ss_dssp ECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC----------C-H----HHHHHHHHHHHHHHHHSTTSEEEEECCSC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc---cc-c----ccHHHHHHHHHHHHHHCCCCeEEEEccCC
Confidence 3334556678888888888877889999999877543211 00 1 224555667778888763 2333322233
Q ss_pred CCCCCcHHHHHHHHHHHh--hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 205 VDDHDSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~--e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
|+ ..+..++ .+.+ ++.++.+|- . .+++.+++...++.+.. .+||.+.=.+.+..++
T Consensus 228 w~----~~~A~~~-~~~L~~~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~ 285 (393)
T 3u9i_A 228 YT----APDALRL-LDMLGVHGIVPALFE----Q------------PVAKDDEEGLRRLTATR-RVPVAADESVASATDA 285 (393)
T ss_dssp CC----HHHHHHH-HHTTTTTTCCCSEEE----C------------CSCTTCTTHHHHHHHTC-SSCEEESTTCCSHHHH
T ss_pred CC----HHHHHHH-HHHHhhCCCCeEEEE----C------------CCCCCcHHHHHHHHhhC-CCcEEeCCcCCCHHHH
Confidence 43 3444443 4455 555665554 1 12222355566776664 8999998899999999
Q ss_pred HHHHHc-CCCeeee
Q 013784 283 NAALRK-GAHHVMV 295 (436)
Q Consensus 283 ~~~l~~-Gad~Vmi 295 (436)
.++++. .+|.|++
T Consensus 286 ~~~i~~~a~d~i~~ 299 (393)
T 3u9i_A 286 ARLARNAAVDVLNI 299 (393)
T ss_dssp HHHHHTTCCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 999984 4787774
No 315
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=93.06 E-value=1.6 Score=41.48 Aligned_cols=191 Identities=13% Similarity=0.114 Sum_probs=103.8
Q ss_pred CCcEEEcCCCCCChHHHHHHHHHcCCC--cE--EEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCC-HHHHHHH
Q 013784 68 PPWFSVAPMMDWTDNHYRTLARLISKH--AW--LYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN-LDNLAKA 142 (436)
Q Consensus 68 ~n~iilAPMagvtd~~fr~~~~~~Gg~--gl--~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~-p~~~~~a 142 (436)
++++++| +--.+-.....++.+.++. .. +.++++...+. ..++.+.+ .+.++++=+--+| |.....+
T Consensus 4 ~~~LivA-LD~~~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~----~~v~~Lk~---~g~~VflDlK~~DIpnTv~~a 75 (259)
T 3tfx_A 4 DRPVIVA-LDLDNEEQLNKILSKLGDPHDVFVKVGMELFYNAGI----DVIKKLTQ---QGYKIFLDLKMHDIPNTVYNG 75 (259)
T ss_dssp CCCEEEE-CCCSCHHHHHHHHHTTCCGGGCEEEECHHHHHHHCH----HHHHHHHH---TTCEEEEEEEECSCHHHHHHH
T ss_pred CCCeEEE-eCCCCHHHHHHHHHHhCcccceEEEeCHHHHHhcCH----HHHHHHHH---CCCcEEEEecccccchHHHHH
Confidence 3456655 2223344456666666532 11 22344433322 11223322 2567777775455 6666777
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc--cC--Cc----EEEEeccC---C--C--C
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN--TN--VP----VSVKCRIG---V--D--D 207 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~--~~--iP----vsvKiR~G---~--~--~ 207 (436)
++.+.++|+|.+.+|... | .+.+...+++..+. .+ .| |++-...+ + + .
T Consensus 76 ~~~~~~~gad~vTVh~~~-----------G------~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~ 138 (259)
T 3tfx_A 76 AKALAKLGITFTTVHALG-----------G------SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNC 138 (259)
T ss_dssp HHHHHTTTCSEEEEEGGG-----------C------HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCB
T ss_pred HHHHHhcCCCEEEEcCCC-----------C------HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCC
Confidence 888889999999998521 1 23455555554432 12 23 21222222 0 0 0
Q ss_pred CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH----HH--
Q 013784 208 HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV----DE-- 281 (436)
Q Consensus 208 ~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~----~d-- 281 (436)
..++.+.+..+++...++|+|.+++++.+ ...+++... +-.++..+||.-. .|
T Consensus 139 ~~~~~e~v~~~A~~a~~~G~dGvV~s~~e------------------~~~ir~~~~---~~f~~vtPGIr~~g~~~gDQ~ 197 (259)
T 3tfx_A 139 RLPMAEQVLSLAKMAKHSGADGVICSPLE------------------VKKLHENIG---DDFLYVTPGIRPAGNAKDDQS 197 (259)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCEEECCGGG------------------HHHHHHHHC---SSSEEEECCCCCC--------
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEECHHH------------------HHHHHhhcC---CccEEEcCCcCCCCCCcCCcc
Confidence 12345555556777778999999875322 333333332 2235677887642 11
Q ss_pred ----HHHHHHcCCCeeeehHHHHhCCc
Q 013784 282 ----VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 282 ----a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
..++++.|||.+.+||+++..++
T Consensus 198 Rv~T~~~a~~aGad~iVvGr~I~~a~d 224 (259)
T 3tfx_A 198 RVATPKMAKEWGSSAIVVGRPITLASD 224 (259)
T ss_dssp ---CHHHHHHTTCSEEEECHHHHTSSS
T ss_pred ccCCHHHHHHcCCCEEEEChHHhCCCC
Confidence 56777899999999999988665
No 316
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.06 E-value=1.6 Score=43.16 Aligned_cols=199 Identities=12% Similarity=0.056 Sum_probs=116.5
Q ss_pred cccCCeec--C-CcEEEcCCCC--CChHH----HHHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEE
Q 013784 60 EMVARQYL--P-PWFSVAPMMD--WTDNH----YRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQ 130 (436)
Q Consensus 60 ~~i~~l~l--~-n~iilAPMag--vtd~~----fr~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQ 130 (436)
+++++..+ . +++|.|.+.. +.+.. +...++++| ++.+=-....++.+..... ..+ ...+ + .-|
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aG-adavKfq~~k~~tl~s~~~--~~f---q~~~-~-~~~ 78 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAG-AEVVKHQTHIVEDEMSDEA--KQV---IPGN-A-DVS 78 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHT-CSEEEEEECCHHHHCCGGG--GGC---CCTT-C-SSC
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhC-CCEEeeeecccccccCcch--hcc---ccCC-C-Ccc
Confidence 34665544 2 4789998754 33332 233346665 7777666555555422111 111 1111 1 101
Q ss_pred E------cCCCHHHHHHHHHHHHHCCCCEEEe-----------cCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 131 I------GGSNLDNLAKATELANAYNYDEINL-----------NCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 131 L------~g~~p~~~~~aA~~~~~~G~d~IdL-----------N~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
+ .+-..+++....+.+++.|...+-- ..++|.-++ ||.-+.+..++.++-+ +
T Consensus 79 ~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI------~S~~~~n~~LL~~va~-----~ 147 (349)
T 2wqp_A 79 IYEIMERCALNEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKI------GSGECNNYPLIKLVAS-----F 147 (349)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEE------CGGGTTCHHHHHHHHT-----T
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEE------CcccccCHHHHHHHHh-----c
Confidence 1 1345678888888888888665432 235666554 7777889888776543 5
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN 273 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan 273 (436)
+.||.+|.-.. +.+|+...+. .+.+.|.+.+.+|+-+. +..+ ...+++..+..+.+.++++||+.+
T Consensus 148 gkPviLstGma-----t~~Ei~~Ave-~i~~~G~~iiLlhc~s~---Yp~~-----~~~~nL~ai~~lk~~f~~lpVg~s 213 (349)
T 2wqp_A 148 GKPIILSTGMN-----SIESIKKSVE-IIREAGVPYALLHCTNI---YPTP-----YEDVRLGGMNDLSEAFPDAIIGLS 213 (349)
T ss_dssp CSCEEEECTTC-----CHHHHHHHHH-HHHHHTCCEEEEECCCC---SSCC-----GGGCCTHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEECCCC-----CHHHHHHHHH-HHHHcCCCEEEEeccCC---CCCC-----hhhcCHHHHHHHHHHCCCCCEEeC
Confidence 89998886552 4555554433 44456778778886432 2211 123457778888777658999876
Q ss_pred CCCCCHHHHHHHHHcCCC
Q 013784 274 GGINTVDEVNAALRKGAH 291 (436)
Q Consensus 274 GgI~s~~da~~~l~~Gad 291 (436)
+=-....-..++...||+
T Consensus 214 dHt~G~~~~~AAvAlGA~ 231 (349)
T 2wqp_A 214 DHTLDNYACLGAVALGGS 231 (349)
T ss_dssp CCSSSSHHHHHHHHHTCC
T ss_pred CCCCcHHHHHHHHHhCCC
Confidence 544446667777788999
No 317
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.87 E-value=0.093 Score=54.64 Aligned_cols=61 Identities=21% Similarity=0.262 Sum_probs=47.7
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.++|+|.|.++... |.+ ..-++.+.++++.++++||++ |+|.+.+++.++.+.|||+|.+|
T Consensus 240 ~~aG~d~I~id~a~----g~~--------~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 240 VEAGVDVLLIDSSH----GHS--------EGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHTTCSEEEEECSC----TTS--------HHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HhccCceEEecccc----ccc--------hHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 35899999997542 211 112577888888877899988 88999999999999999999986
No 318
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.87 E-value=0.38 Score=46.42 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=60.3
Q ss_pred HHHHHHHhhc-cCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 183 GEAMSVIAAN-TNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 183 ~eiv~av~~~-~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
.+.++++++. ...||.|-+ ++.+++.+. + ++|+|.|-+..-+ .+.+.+.
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv-------~tl~ea~eA----l-~aGaD~I~LDn~~------------------~~~l~~a 235 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEV-------TNLDELNQA----I-AAKADIVMLDNFS------------------GEDIDIA 235 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEE-------SSHHHHHHH----H-HTTCSEEEEESCC------------------HHHHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEe-------CCHHHHHHH----H-HcCCCEEEEcCCC------------------HHHHHHH
Confidence 3455555553 245555522 345555442 2 4899999886321 2333344
Q ss_pred HhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 262 LRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 262 ~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
++.. .++++.++||| +.+.+.++.++|+|.+.+|.-...-|++
T Consensus 236 v~~~~~~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGalt~sa~~l 279 (287)
T 3tqv_A 236 VSIARGKVALEVSGNI-DRNSIVAIAKTGVDFISVGAITKHIKAI 279 (287)
T ss_dssp HHHHTTTCEEEEESSC-CTTTHHHHHTTTCSEEECSHHHHSBCCC
T ss_pred HHhhcCCceEEEECCC-CHHHHHHHHHcCCCEEEEChhhcCCccc
Confidence 3322 37999999999 7899999999999999999877777775
No 319
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.83 E-value=6.9 Score=37.41 Aligned_cols=148 Identities=17% Similarity=0.168 Sum_probs=92.7
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++.+.+++.++-.+.++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=-
T Consensus 69 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~-------~----~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 69 DKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLI--TPYYN-------K----TNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp TTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCSS-------C----CCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 456799999999999999999999999999998765 34321 1 2345677788888888899988754
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC--cEEEEeCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD--LTFTLNGGI 276 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~--iPVIanGgI 276 (436)
|.|.+- +.+.+ .++++.-.+-+|--.. | ++..+.++++..++ +. +.+|+=
T Consensus 136 ~P~~tg~~l--~~~~~----~~La~~pnivgiK~ss------g------------d~~~~~~~~~~~~~~~f~-v~~G~d 190 (292)
T 3daq_A 136 VPSRTNMTI--EPETV----EILSQHPYIVALKDAT------N------------DFEYLEEVKKRIDTNSFA-LYSGND 190 (292)
T ss_dssp CHHHHSCCC--CHHHH----HHHHTSTTEEEEEECC------C------------CHHHHHHHHTTSCTTTSE-EEESCG
T ss_pred cccccCCCC--CHHHH----HHHhcCCCEEEEEeCC------C------------CHHHHHHHHHHCCCCCEE-EEECCH
Confidence 445443 23333 3343312222222110 1 15666677665543 44 456651
Q ss_pred CCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 277 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.|.+- ..|.++.+-.+
T Consensus 191 ---~~~~~~l~~G~~G~is~~~n-~~P~~~~~l~~ 221 (292)
T 3daq_A 191 ---DNVVEYYQRGGQGVISVIAN-VIPKEFQALYD 221 (292)
T ss_dssp ---GGHHHHHHTTCCEEEESGGG-TCHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCEEEeCHHH-hhHHHHHHHHH
Confidence 33566778999999988875 34665443333
No 320
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=92.82 E-value=6.9 Score=37.35 Aligned_cols=188 Identities=13% Similarity=0.115 Sum_probs=105.9
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+.-..++.++. ..|-.|+++.+...--......++ ++...+......|+++++++++.++-.+.++.+++.|+|
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 45566766653 345345555443322111111111 111122233557999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
++-+- .|.-. + -..+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++++.-.+-+
T Consensus 99 avlv~--~P~y~--~---------~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~~pnivg 159 (291)
T 3tak_A 99 AALLV--TPYYN--K---------PTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDL--SNDTA----VRLAEIPNIVG 159 (291)
T ss_dssp EEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCC--CHHHH----HHHTTSTTEEE
T ss_pred EEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEecccccCCCC--CHHHH----HHHHcCCCEEE
Confidence 98764 44421 1 2345677888888888899987753 345433 23332 33433222322
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
|--.. | ++..+.++++.. .++. +.+|+ -+.+...+..|++|+..+.+- ..|.++.+
T Consensus 160 iK~ss------g------------d~~~~~~~~~~~~~~f~-v~~G~---d~~~~~~l~~G~~G~is~~~n-~~P~~~~~ 216 (291)
T 3tak_A 160 IKDAT------G------------DVPRGKALIDALNGKMA-VYSGD---DETAWELMLLGADGNISVTAN-IAPKAMSE 216 (291)
T ss_dssp EEECS------C------------CHHHHHHHHHHHTTSSE-EEECC---HHHHHHHHHTTCCEEEESGGG-TCHHHHHH
T ss_pred EEeCC------C------------CHHHHHHHHHHcCCCeE-EEECc---HHHHHHHHHCCCCEEEechhh-hcHHHHHH
Confidence 22110 1 144444544432 2454 46675 344556777999999988765 34665433
No 321
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=92.75 E-value=2.6 Score=42.49 Aligned_cols=123 Identities=7% Similarity=0.038 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCc
Q 013784 133 GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDS 210 (436)
Q Consensus 133 g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~ 210 (436)
...++.+++.++...+.||..+-+..|... +...+.++++|+.++ +.+.+=.-.+|+
T Consensus 186 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~-----------------~~~~~~v~~vR~~~g~~~~l~vDaN~~~~---- 244 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQAKGFSSFKFASPVAD-----------------DGVAKEMEILRERLGPAVRIACDMHWAHT---- 244 (412)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEEGGGCT-----------------TCHHHHHHHHHHHHCSSSEEEEECCSCCC----
T ss_pred CCcHHHHHHHHHHHHhcCcceeccccccch-----------------hhHHHHHHHHHhccCCeEEEEeccccCCC----
Confidence 346788888888888889999887543211 112344566777664 333333333443
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG- 289 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G- 289 (436)
..+..++ .+.+++.|+.+|- . .+++-+++.+.++.+.. ++||.+.=.+.+..++.++++.+
T Consensus 245 ~~~A~~~-~~~l~~~~l~~iE----q------------P~~~~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a 306 (412)
T 4h1z_A 245 ASEAVAL-IKAMEPHGLWFAE----A------------PVRTEDIDGLARVAASV-STAIAVGEEWRTVHDMVPRVARRA 306 (412)
T ss_dssp HHHHHHH-HHHHGGGCEEEEE----C------------CSCTTCHHHHHHHHHHC-SSEEEECTTCCSHHHHHHHHHTTC
T ss_pred HHHHHHH-HHhhcccccceec----C------------CCCccchHHHHHHHhhc-CCccccCCcccchHhHHHHHHcCC
Confidence 3444443 4566778876654 1 12333477777887775 89999988999999999999855
Q ss_pred CCeee
Q 013784 290 AHHVM 294 (436)
Q Consensus 290 ad~Vm 294 (436)
+|.|+
T Consensus 307 ~div~ 311 (412)
T 4h1z_A 307 LAIVQ 311 (412)
T ss_dssp CSEEC
T ss_pred CCEEE
Confidence 56655
No 322
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=92.52 E-value=8.1 Score=37.41 Aligned_cols=148 Identities=14% Similarity=0.098 Sum_probs=91.7
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++-.+.++.+++.|+|++-+- .|.-. . -..+-+.+-.++|.+++++||.+=-
T Consensus 91 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 91 AHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVL--PISYW-------K----LNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS-------C----CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 456799999999999999999999999999998773 45421 1 2346688888888888899987754
Q ss_pred ---ccCCCCCCcHHHHHHHHHHH-hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKV-SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI 276 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~-~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI 276 (436)
|.|.+- +.+.+ .++ .+.-.+-+|--.. | ++..+.++++... ++.| .+|+=
T Consensus 158 ~P~~tg~~l--~~~~~----~~L~a~~pnIvgiKdss------g------------d~~~~~~~~~~~~~~f~v-~~G~D 212 (315)
T 3na8_A 158 NPGTSGIDM--SVELI----LRIVREVDNVTMVKEST------G------------DIQRMHKLRLLGEGRVPF-YNGCN 212 (315)
T ss_dssp CHHHHSCCC--CHHHH----HHHHHHSTTEEEEEECS------S------------CHHHHHHHHHHTTTCSCE-EECCG
T ss_pred CcchhCcCC--CHHHH----HHHHhcCCCEEEEECCC------C------------CHHHHHHHHHHcCCCEEE-EeCch
Confidence 445443 23333 333 2222233333211 1 1444555555432 4444 45542
Q ss_pred CCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 277 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.+.+-+ .|.++.+-.+
T Consensus 213 ---~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~ 243 (315)
T 3na8_A 213 ---PLALEAFVAGAKGWCSAAPNL-IPTLNGQLYQ 243 (315)
T ss_dssp ---GGHHHHHHHTCSEEEESGGGT-CHHHHHHHHH
T ss_pred ---HHHHHHHHCCCCEEEechhhh-CHHHHHHHHH
Confidence 234566778999999888764 4655443333
No 323
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.41 E-value=2.9 Score=40.44 Aligned_cols=157 Identities=14% Similarity=0.143 Sum_probs=85.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~-gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
.+.|+ +=+...|+ -.|++++++|||.|=+.- +.-. ... | |-....-..+.+...++.|...+++||.+=+
T Consensus 20 ~~~~i-~~~~a~D~----~sA~l~e~aGf~ai~vs~~s~a~-~~~--G-~pD~~~vt~~em~~~~~~I~r~~~~PviaD~ 90 (298)
T 3eoo_A 20 AEQPL-QVVGAITA----YAAKMAEAVGFKAVYLSGGGVAA-NSL--G-IPDLGISTMDDVLVDANRITNATNLPLLVDI 90 (298)
T ss_dssp HSSSE-EEEECSSH----HHHHHHHHHTCSCEEECHHHHHH-HTT--C-CCSSSCCCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CCCcE-EEecCCCH----HHHHHHHHcCCCEEEECcHHHHH-Hhc--C-CCCCCCCCHHHHHHHHHHHHhhcCCeEEEEC
Confidence 34443 33455555 366778889999887753 1110 000 1 1111223456677777777777899999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCccc-ccCCCCCCCCCCCCccHHHHHHH---HhcC--CCcEEEEeCC
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKAL-LNGISPAENRTIPPLKYEYYYAL---LRDF--PDLTFTLNGG 275 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~-~~G~~~~~~~~i~~~~~~~v~~l---~~~~--~~iPVIanGg 275 (436)
..|+. +.+++.+.+. .++++|+++|.+-+.... ..|.. ....+-+. -+.+.++ ++.. +++-|++=-|
T Consensus 91 d~Gyg---~~~~v~~~v~-~l~~aGaagv~iEDq~~~k~cGh~--~gk~l~~~-~e~~~ri~Aa~~A~~~~~~~I~ARTD 163 (298)
T 3eoo_A 91 DTGWG---GAFNIARTIR-SFIKAGVGAVHLEDQVGQKRCGHR--PGKECVPA-GEMVDRIKAAVDARTDETFVIMARTD 163 (298)
T ss_dssp TTCSS---SHHHHHHHHH-HHHHTTCSEEEEECBCCCCCTTCC--CCCCBCCH-HHHHHHHHHHHHHCSSTTSEEEEEEC
T ss_pred CCCCC---CHHHHHHHHH-HHHHhCCeEEEECCCCCCcccCCC--CCCeecCH-HHHHHHHHHHHHhccCCCeEEEEeeh
Confidence 99863 3445555544 445699999999765420 11211 11122222 2333333 2222 3455666555
Q ss_pred CCCHHHHHH-------HHHcCCCeeee
Q 013784 276 INTVDEVNA-------ALRKGAHHVMV 295 (436)
Q Consensus 276 I~s~~da~~-------~l~~Gad~Vmi 295 (436)
-...+++.+ +.+.|||+|.+
T Consensus 164 a~~~~gldeai~Ra~ay~~AGAD~if~ 190 (298)
T 3eoo_A 164 AAAAEGIDAAIERAIAYVEAGADMIFP 190 (298)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhhhcCHHHHHHHHHhhHhcCCCEEEe
Confidence 543333333 33479999997
No 324
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.35 E-value=0.59 Score=43.52 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhccCCcEEEEeccCCCC-CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHH
Q 013784 181 FVGEAMSVIAANTNVPVSVKCRIGVDD-HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYY 259 (436)
Q Consensus 181 ~l~eiv~av~~~~~iPvsvKiR~G~~~-~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~ 259 (436)
.+..+++.+...-++-|++ +.-.++ ..+.....+ +++..++.|+.+|.+.+ .+.+.
T Consensus 6 ~~~~~~~~~~~~~~livsc--q~~~~~pl~~~~~~~~-~A~a~~~~Ga~~i~~~~--------------------~~~i~ 62 (232)
T 3igs_A 6 LLEQLDKNIAASGGLIVSC--QPVPGSPLDKPEIVAA-MALAAEQAGAVAVRIEG--------------------IDNLR 62 (232)
T ss_dssp HHHHHHHHHHHHCCEEEEC--CCCTTCTTCSHHHHHH-HHHHHHHTTCSEEEEES--------------------HHHHH
T ss_pred HHHHHHHHhhhcCCEEEEE--eCCCCCCCCCcchHHH-HHHHHHHCCCeEEEECC--------------------HHHHH
Confidence 4555566553333433444 432211 123334443 57778889999988721 56666
Q ss_pred HHHhcCCCcEEEE-e----CC--C---CCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 260 ALLRDFPDLTFTL-N----GG--I---NTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 260 ~l~~~~~~iPVIa-n----Gg--I---~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
++++.+ ++||++ + || + .+.+++.++++.|||.|.++.++..+|...
T Consensus 63 ~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l 118 (232)
T 3igs_A 63 MTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAV 118 (232)
T ss_dssp HHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCH
T ss_pred HHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHH
Confidence 776654 999986 1 44 3 356789999999999999999888888653
No 325
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.26 E-value=1.4 Score=44.24 Aligned_cols=200 Identities=11% Similarity=0.043 Sum_probs=113.3
Q ss_pred cccCCeec---CCcEEEcCCCC--CChH--HH--HHHHHHcCCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEE
Q 013784 60 EMVARQYL---PPWFSVAPMMD--WTDN--HY--RTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQ 130 (436)
Q Consensus 60 ~~i~~l~l---~n~iilAPMag--vtd~--~f--r~~~~~~Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQ 130 (436)
++|++..+ .+++|.|=+.. ..+. .+ ...++++| ++.+=-+...++.+..... ..+ ...+ +..-|
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aG-AdavKfQ~~k~~tl~s~~~--~~f---q~~~-~~~~~ 88 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAG-ADAVKFQMFQADRMYQKDP--GLY---KTAA-GKDVS 88 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHT-CSEEEECCBCGGGGTSCCC---------------CCC
T ss_pred eeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhC-CCEEeeeeeccCcccCcch--hhh---ccCC-CCCcc
Confidence 34776666 35788885532 2232 22 33356665 7877666666655432211 001 0000 00101
Q ss_pred E------cCCCHHHHHHHHHHHHHCCCCEEEe-----------cCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 131 I------GGSNLDNLAKATELANAYNYDEINL-----------NCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 131 L------~g~~p~~~~~aA~~~~~~G~d~IdL-----------N~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
+ .+-..+++....+.+++.|.+.+-- ..++|.-++ ||.-+.+..++.++-+ +
T Consensus 89 ~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KI------gS~~~~N~pLL~~va~-----~ 157 (385)
T 1vli_A 89 IFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKI------ASYEINHLPLLKYVAR-----L 157 (385)
T ss_dssp HHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEE------CGGGTTCHHHHHHHHT-----T
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEE------CcccccCHHHHHHHHh-----c
Confidence 1 1234577777888888888554321 245666554 7777889888776543 5
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCc-cEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT-RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gv-d~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
+.||.+|.-.. +.+|+...+ ..+.+.|. +.+.+|+-+. +..+. ..+++..+..+.+.++++||..
T Consensus 158 gKPViLStGma-----Tl~Ei~~Av-e~i~~~Gn~~iiLlhc~s~---YPtp~-----~~~nL~aI~~Lk~~f~~lpVG~ 223 (385)
T 1vli_A 158 NRPMIFSTAGA-----EISDVHEAW-RTIRAEGNNQIAIMHCVAK---YPAPP-----EYSNLSVIPMLAAAFPEAVIGF 223 (385)
T ss_dssp CSCEEEECTTC-----CHHHHHHHH-HHHHTTTCCCEEEEEECSS---SSCCG-----GGCCTTHHHHHHHHSTTSEEEE
T ss_pred CCeEEEECCCC-----CHHHHHHHH-HHHHHCCCCcEEEEeccCC---CCCCh-----hhcCHHHHHHHHHHcCCCCEEe
Confidence 89999886552 455655543 34556887 6666686432 22211 2244666777777765799977
Q ss_pred eCCCCC-HHHHHHHHHcCCC
Q 013784 273 NGGINT-VDEVNAALRKGAH 291 (436)
Q Consensus 273 nGgI~s-~~da~~~l~~Gad 291 (436)
++=-.. ..-..++...||+
T Consensus 224 SdHt~G~~~~~~AAvAlGA~ 243 (385)
T 1vli_A 224 SDHSEHPTEAPCAAVRLGAK 243 (385)
T ss_dssp EECCSSSSHHHHHHHHTTCS
T ss_pred CCCCCCchHHHHHHHHcCCC
Confidence 654444 5667777789998
No 326
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.23 E-value=0.36 Score=46.81 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=72.2
Q ss_pred HHHHHCCCCEEE----ecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE--e--ccC--CCCCCcHHH
Q 013784 144 ELANAYNYDEIN----LNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK--C--RIG--VDDHDSYNQ 213 (436)
Q Consensus 144 ~~~~~~G~d~Id----LN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK--i--R~G--~~~~~~~~~ 213 (436)
+.+.+.|+|++- +|.|.|... ...+.+.+++++.. ..|+|+.+- + |.| ..+..+. +
T Consensus 135 e~AvrlGADaV~~l~~i~~Gs~~e~------------~~l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp-~ 200 (307)
T 3fok_A 135 SSMVDRGVDFAKTLVRINLSDAGTA------------PTLEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLST-D 200 (307)
T ss_dssp HHHHHHTCCEEEEEEEECTTCTTHH------------HHHHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSH-H
T ss_pred HHHHHCCCCEEEEEEEECCCChhHH------------HHHHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCH-H
Confidence 344566999866 566655421 23344444444432 458997664 1 212 1121223 3
Q ss_pred HHHHHHHHhhcCCcc----EEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC--CHHHHHHH--
Q 013784 214 LCDFIYKVSSLSPTR----HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN--TVDEVNAA-- 285 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd----~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~--s~~da~~~-- 285 (436)
+....+++..+.|+| .|-+- .. +.+.++++.. .+||+..||=. |.+++.+.
T Consensus 201 ~Va~aaRiAaELGADs~~tivK~~-------y~-------------e~f~~Vv~a~-~vPVViaGG~k~~~~~e~L~~v~ 259 (307)
T 3fok_A 201 AVIQSVAIAAGLGNDSSYTWMKLP-------VV-------------EEMERVMEST-TMPTLLLGGEGGNDPDATFASWE 259 (307)
T ss_dssp HHHHHHHHHHTCSSCCSSEEEEEE-------CC-------------TTHHHHGGGC-SSCEEEECCSCC--CHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCEEEeC-------Cc-------------HHHHHHHHhC-CCCEEEeCCCCCCCHHHHHHHHH
Confidence 444456777889999 77752 10 1134666666 69998888766 45555544
Q ss_pred --HH-cCCCeeeehHHHHh
Q 013784 286 --LR-KGAHHVMVGRAAYQ 301 (436)
Q Consensus 286 --l~-~Gad~VmiGRa~l~ 301 (436)
++ .||.||.+||-++.
T Consensus 260 ~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 260 HALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp HHTTSTTEEEEEECTTTSS
T ss_pred HHHHhCCCeEEeechhhcc
Confidence 44 59999999998766
No 327
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=91.98 E-value=1 Score=45.21 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=81.9
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC-CcEEEEeccC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN-VPVSVKCRIG 204 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~-iPvsvKiR~G 204 (436)
|....+...+++.+++.++.+.+.||..+-+..|... +..+ .+.+++||+.++ ..+.+=.--+
T Consensus 135 ~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~~------------~~~d----~~~v~avR~~~~~~~L~vDaN~~ 198 (389)
T 3s5s_A 135 TTDITITTGSPERAEEAARRAAAMGFRALKVKVGGRL------------AASD----PARIEAIHAAAPGASLILDGNGG 198 (389)
T ss_dssp ECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGGG------------TTTH----HHHHHHHHHHCTTCEEEEECTTC
T ss_pred EEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCCC------------hHHH----HHHHHHHHHhCCCCeEEEECCCC
Confidence 3445566778898888888777779999988765321 1133 345566666553 2333322233
Q ss_pred CCCCCcHHHHHHHHHHHh--hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 205 VDDHDSYNQLCDFIYKVS--SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~--e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
|+ ..+..++ .+.+ ++.++.+|- ..+++.+++...++.+.. ++||.+.=.+.+..++
T Consensus 199 w~----~~~A~~~-~~~L~~~~~~i~~iE----------------eP~~~~d~~~~~~l~~~~-~iPIa~dEs~~~~~~~ 256 (389)
T 3s5s_A 199 LT----AGEALAL-VAHARRLGADVALLE----------------QPVPRDDWDGMKEVTRRA-GVDVAADESAASAEDV 256 (389)
T ss_dssp SC----HHHHHHH-HHHHHHTTCEEEEEE----------------CCSCTTCHHHHHHHHHHS-SSCEEESTTCSSHHHH
T ss_pred CC----HHHHHHH-HHHHhhCCCCeEEEE----------------CCCCcccHHHHHHHHhhC-CCCEEECCCCCCHHHH
Confidence 43 3444443 3445 444444443 112333477777777765 8999998899999999
Q ss_pred HHHHHc-CCCeeee
Q 013784 283 NAALRK-GAHHVMV 295 (436)
Q Consensus 283 ~~~l~~-Gad~Vmi 295 (436)
.++++. .+|.|++
T Consensus 257 ~~~i~~~a~d~v~~ 270 (389)
T 3s5s_A 257 LRVAAERAATVVNI 270 (389)
T ss_dssp HHHHHTTCCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 999984 5788875
No 328
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=91.94 E-value=1.5 Score=41.88 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHCCCCEE-Eec----------CCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccC
Q 013784 136 LDNLAKATELANAYNYDEI-NLN----------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~I-dLN----------~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
.+.+....+.+++.|...+ ++. . ++.- ..|+..+.+..++.++-+ ++.||.+|....
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~------kIgs~~~~n~~ll~~~a~-----~~kPV~lk~G~~ 155 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADML------QIGARNMQNFPLLREVGR-----SGKPVLLKRGFG 155 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEE------EECGGGTTCHHHHHHHHH-----HTCCEEEECCTT
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeE------EECcccccCHHHHHHHHc-----cCCeEEEcCCCC
Confidence 6777777777788887643 221 1 3332 248888899888777653 489999987653
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCcc-EEEEc-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----CCCCC
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTR-HFIIH-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINT 278 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd-~I~vh-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan----GgI~s 278 (436)
.+..++...+..+ ...|.. .+.+| |-+. +.+ .....+++..+..+.+.+ ++||++. +|..+
T Consensus 156 ----~t~~ei~~Ave~i-~~~Gn~~i~L~~Rg~~~-yp~------y~~~~vdl~~i~~lk~~~-~lpVi~dssH~~g~~~ 222 (276)
T 1vs1_A 156 ----NTVEELLAAAEYI-LLEGNWQVVLVERGIRT-FEP------STRFTLDVAAVAVLKEAT-HLPVIVDPSHPAGRRS 222 (276)
T ss_dssp ----CCHHHHHHHHHHH-HHTTCCCEEEEECCBCC-SCC------SSSSBCBHHHHHHHHHHB-SSCEEECCHHHHCSGG
T ss_pred ----CCHHHHHHHHHHH-HHcCCCeEEEEeCCcCC-CCC------cCcchhCHHHHHHHHHHh-CCCEEEeCCCCCCccc
Confidence 1344554443333 457874 44556 4321 111 111234577777777755 7898762 23333
Q ss_pred --HHHHHHHHHcCCCeeeehH
Q 013784 279 --VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 279 --~~da~~~l~~Gad~VmiGR 297 (436)
..-..++...||+|+||=+
T Consensus 223 ~~~~~~~aAva~Ga~Gl~IE~ 243 (276)
T 1vs1_A 223 LVPALAKAGLAAGADGLIVEV 243 (276)
T ss_dssp GHHHHHHHHHHTTCSEEEEEB
T ss_pred hHHHHHHHHHHcCCCEEEEEe
Confidence 4445566779999999865
No 329
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.84 E-value=2.1 Score=40.93 Aligned_cols=88 Identities=13% Similarity=0.166 Sum_probs=57.8
Q ss_pred HHHHHHHHCCCCEEEecC-CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHH
Q 013784 141 KATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN~-gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la 219 (436)
-.|++++++|||.|=+.- +.-. .. | |-....-..+.+...++.|...+++||.+=+..|+. .+.+++.+.+.
T Consensus 27 ~sA~~~~~aG~~ai~vsg~s~a~--~~--G-~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg--~~~~~~~~~v~ 99 (275)
T 2ze3_A 27 ASARLLEAAGFTAIGTTSAGIAH--AR--G-RTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYG--HAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHHHTCSCEEECHHHHHH--HS--C-CCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSS--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcHHHHH--hC--C-CCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCC--CCHHHHHHHHH
Confidence 467788889999887762 1111 11 1 122223456667777788888888999999999954 23445555555
Q ss_pred HHhhcCCccEEEEccCc
Q 013784 220 KVSSLSPTRHFIIHSRK 236 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt 236 (436)
++. ++|+++|.+-+..
T Consensus 100 ~l~-~aGaagv~iED~~ 115 (275)
T 2ze3_A 100 HFA-ALGVAGVNLEDAT 115 (275)
T ss_dssp HHH-HTTCSEEEEECBC
T ss_pred HHH-HcCCcEEEECCCc
Confidence 554 5999999997654
No 330
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=91.74 E-value=0.76 Score=41.82 Aligned_cols=131 Identities=16% Similarity=0.075 Sum_probs=85.2
Q ss_pred cEEEEEcCC----CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 126 PIVLQIGGS----NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 126 pi~vQL~g~----~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
-+.+|.++. +++...+.|+.+++.|++++.++ .+ +.++++++.+++|+....
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~--------------------~~----~~i~~i~~~~~~pv~~~~ 63 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN--------------------TK----EDILAIKETVDLPVIGIV 63 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE--------------------SH----HHHHHHHHHCCSCEEEEC
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC--------------------CH----HHHHHHHHhcCCCEEeee
Confidence 367899988 67888899999999999998663 12 446677777899984322
Q ss_pred ccCCCC-----CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCC
Q 013784 202 RIGVDD-----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI 276 (436)
Q Consensus 202 R~G~~~-----~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI 276 (436)
+..+.+ ..+.+++. . +.++|+|.+++|.... ..+. ..-.+.+..+.+.+++.+++. ++
T Consensus 64 ~~~~~~~~~~i~~~~~~i~----~-~~~~Gad~v~l~~~~~----~~p~------~~~~~~i~~~~~~~~~~~v~~--~~ 126 (223)
T 1y0e_A 64 KRDYDHSDVFITATSKEVD----E-LIESQCEVIALDATLQ----QRPK------ETLDELVSYIRTHAPNVEIMA--DI 126 (223)
T ss_dssp BCCCTTCCCCBSCSHHHHH----H-HHHHTCSEEEEECSCS----CCSS------SCHHHHHHHHHHHCTTSEEEE--EC
T ss_pred ccCCCccccccCCcHHHHH----H-HHhCCCCEEEEeeecc----cCcc------cCHHHHHHHHHHhCCCceEEe--cC
Confidence 322111 12223322 2 2358999999986421 0000 011455666666655777765 67
Q ss_pred CCHHHHHHHHHcCCCeeeehH
Q 013784 277 NTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~VmiGR 297 (436)
.+.+++.++.+.|+|.|+++-
T Consensus 127 ~t~~e~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 127 ATVEEAKNAARLGFDYIGTTL 147 (223)
T ss_dssp SSHHHHHHHHHTTCSEEECTT
T ss_pred CCHHHHHHHHHcCCCEEEeCC
Confidence 899999998889999998753
No 331
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=91.73 E-value=1.4 Score=43.07 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=63.1
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHH
Q 013784 178 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
.++.+.+.++.+++.++.|+.|.+-. ++ .+..+..+ .+.+.|+|.|.+|+.. | .++
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~-~~--~~~~~~~~----~~~~~g~d~V~l~~g~---------------p--~~~ 116 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIIL-VS--PWADDLVK----VCIEEKVPVVTFGAGN---------------P--TKY 116 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEET-TS--TTHHHHHH----HHHHTTCSEEEEESSC---------------C--HHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEec-cC--CCHHHHHH----HHHHCCCCEEEECCCC---------------c--HHH
Confidence 67888899999988778888776543 11 22333333 3346899999997532 1 234
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi 295 (436)
+..+.+ . +++|+. +|.+.+++.++.+.|+|+|.+
T Consensus 117 ~~~l~~-~-g~~v~~--~v~s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 117 IRELKE-N-GTKVIP--VVASDSLARMVERAGADAVIA 150 (326)
T ss_dssp HHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSCEEE
T ss_pred HHHHHH-c-CCcEEE--EcCCHHHHHHHHHcCCCEEEE
Confidence 444443 3 788885 688999999999999999998
No 332
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.70 E-value=0.3 Score=50.91 Aligned_cols=62 Identities=19% Similarity=0.315 Sum_probs=46.7
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++|+|.|.+.... |.+ ..-++.+.++++.++++||+ .|+|.+.++++++.+.|||+|.+|
T Consensus 264 LveaGvd~I~Id~a~----g~~--------~~v~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 264 LVKASVDAIVLDTAH----GHS--------QGVIDKVKEVRAKYPSLNII-AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHTTCSEEEEECSC----TTS--------HHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHhhccceEEecccc----cch--------hhhhhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHhCCCEEEEC
Confidence 345899999996432 111 01156778888887778888 478999999999999999999874
No 333
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=91.69 E-value=4.6 Score=39.73 Aligned_cols=130 Identities=10% Similarity=0.083 Sum_probs=84.8
Q ss_pred EEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEecc
Q 013784 127 IVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRI 203 (436)
Q Consensus 127 i~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~ 203 (436)
+..-+. +..++.+.+.++.+.+.||..+-+..|. .+++.-.+.++++++.++ +.+.+=.--
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~----------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~ 197 (370)
T 2chr_A 134 IAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF----------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQ 197 (370)
T ss_dssp BEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS----------------SCHHHHHHHHHHHHHHTTTTSEEEEECTT
T ss_pred eeeeeccCchhhhHHHHHHHHhhcccceeeccccc----------------CChHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 333444 3456778888888899999988775442 234445566778888765 334443344
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+. ++..++ .+.+++.++.+|- . .+++.+++.+.++.+.. ++||.+.=.+.+..++.
T Consensus 198 ~~~~----~~A~~~-~~~l~~~~~~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 255 (370)
T 2chr_A 198 AWDE----QVASVY-IPELEALGVELIE----Q------------PVGRENTQALRRLSDNN-RVAIMADESLSTLASAF 255 (370)
T ss_dssp CCCT----HHHHHH-HHHHHTTTCCEEE----C------------CSCSSCHHHHHHHHHHC-SSEEEESSSCCSHHHHH
T ss_pred CCCH----HHHHHH-HHHHHhcCCceec----C------------CCChhhhhhhhHHhhhc-cCCccCCccCCCHHHHH
Confidence 5543 233332 4556778887765 1 12333477777887765 89999988999999999
Q ss_pred HHHHc-CCCeee
Q 013784 284 AALRK-GAHHVM 294 (436)
Q Consensus 284 ~~l~~-Gad~Vm 294 (436)
++++. .+|.|+
T Consensus 256 ~~~~~~a~d~i~ 267 (370)
T 2chr_A 256 DLARDRSVDVFS 267 (370)
T ss_dssp HHHTTTCCSEEC
T ss_pred HHHHcCCCcEEE
Confidence 99985 467765
No 334
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=91.65 E-value=9.9 Score=36.54 Aligned_cols=194 Identities=15% Similarity=0.085 Sum_probs=109.2
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
++.|+. .+....++.++. ..|-.|+++.+...--..+...++ ++...+......|+++++.+++.++-.+.
T Consensus 24 ~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~l 103 (304)
T 3cpr_A 24 MVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVEL 103 (304)
T ss_dssp CCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHH
T ss_pred eeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHH
Confidence 344553 255566777763 344345555543221111111111 11222233456799999999999999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la 219 (436)
++.+++.|+|++-+- .|.- + + ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .
T Consensus 104 a~~A~~~Gadavlv~--~P~y-~-~---------~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l--~~~~~----~ 164 (304)
T 3cpr_A 104 AEAAASAGADGLLVV--TPYY-S-K---------PSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPI--ESDTM----R 164 (304)
T ss_dssp HHHHHHTTCSEEEEE--CCCS-S-C---------CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCC--CHHHH----H
T ss_pred HHHHHhcCCCEEEEC--CCCC-C-C---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCC--CHHHH----H
Confidence 999999999998765 3442 1 1 2346677888888888899987643 445443 23333 3
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
++++.-.+-+|--.. | ++..+.++++.. ++. +.+|+= +.+...+..|++|+..|.+-
T Consensus 165 ~La~~pnIvgiKdss------g------------d~~~~~~~~~~~-~f~-v~~G~d---~~~l~~l~~G~~G~is~~an 221 (304)
T 3cpr_A 165 RLSELPTILAVXDAK------G------------DLVAATSLIKET-GLA-WYSGDD---PLNLVWLALGGSGFISVIGH 221 (304)
T ss_dssp HHTTSTTEEEEEECS------C------------CHHHHHHHHHHH-CCE-EEECSG---GGHHHHHHTTCCEEEESGGG
T ss_pred HHHcCCCEEEEecCC------C------------CHHHHHHHHHhc-CEE-EEECcH---HHHHHHHHCCCCEEEecHHH
Confidence 343322222222111 1 144444554432 444 456641 33556677899999999876
Q ss_pred HhCCcchhh
Q 013784 300 YQNPWYTLG 308 (436)
Q Consensus 300 l~~P~lf~~ 308 (436)
+ -|..+.+
T Consensus 222 ~-~P~~~~~ 229 (304)
T 3cpr_A 222 A-APTALRE 229 (304)
T ss_dssp T-CHHHHHH
T ss_pred h-hHHHHHH
Confidence 4 5665443
No 335
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.63 E-value=3.2 Score=41.06 Aligned_cols=129 Identities=12% Similarity=0.137 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHCCCCEEEe-----------cCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccC
Q 013784 136 LDNLAKATELANAYNYDEINL-----------NCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIG 204 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~IdL-----------N~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G 204 (436)
.+++....+.+++.|.+.+-- ..++|.-++ ||.-+.+..++.++- .++.||.+|.-..
T Consensus 77 ~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI------~S~~~~N~pLL~~va-----~~gKPviLstGms 145 (350)
T 3g8r_A 77 PEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKI------ASCSFTDWPLLERIA-----RSDKPVVASTAGA 145 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEE------CSSSTTCHHHHHHHH-----TSCSCEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEE------CcccccCHHHHHHHH-----hhCCcEEEECCCC
Confidence 455555556666666443322 234554443 555667888777654 3599999886552
Q ss_pred CCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----CCCCCHH
Q 013784 205 VDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINTVD 280 (436)
Q Consensus 205 ~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan----GgI~s~~ 280 (436)
+.+|+...+ ..+.+.|.+.+.+|+-+. +..+. ..+++..+..+.+.++++||..+ |+.. .
T Consensus 146 -----tl~Ei~~Av-e~i~~~g~~viLlhC~s~---YPt~~-----~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~--~ 209 (350)
T 3g8r_A 146 -----RREDIDKVV-SFMLHRGKDLTIMHCVAE---YPTPD-----DHLHLARIKTLRQQYAGVRIGYSTHEDPDLM--E 209 (350)
T ss_dssp -----CHHHHHHHH-HHHHTTTCCEEEEECCCC---SSCCG-----GGCCTTHHHHHHHHCTTSEEEEEECCCSSCC--H
T ss_pred -----CHHHHHHHH-HHHHHcCCCEEEEecCCC---CCCCc-----ccCCHHHHHHHHHHCCCCCEEcCCCCCCCcc--H
Confidence 455555543 344457888666686432 22211 23456677788887778999777 4432 2
Q ss_pred HHHHHHHcCCC
Q 013784 281 EVNAALRKGAH 291 (436)
Q Consensus 281 da~~~l~~Gad 291 (436)
-+.++...||+
T Consensus 210 ~~~AAvAlGA~ 220 (350)
T 3g8r_A 210 PIMLAVAQGAT 220 (350)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 33467778986
No 336
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.62 E-value=3.9 Score=39.44 Aligned_cols=160 Identities=17% Similarity=0.193 Sum_probs=86.8
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCC-CCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCG-CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~g-cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
.+.|+ +=+...|. -.|++++++|||.|=+.-. .-. ... | |-....-..+.+...+++|...+++||.+=+
T Consensus 15 ~~~~i-~~~~a~D~----~sA~~~~~aG~~ai~vs~~~~a~-~~~--G-~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 85 (295)
T 1xg4_A 15 KENPL-QIVGTINA----NHALLAQRAGYQAIYLSGGGVAA-GSL--G-LPDLGISTLDDVLTDIRRITDVCSLPLLVDA 85 (295)
T ss_dssp HSSSE-EEEECSSH----HHHHHHHHTTCSCEEECHHHHHH-TTT--C-CCSSSCSCHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CCCcE-EEecCcCH----HHHHHHHHcCCCEEEECchHhhh-hhc--C-CCCCCCCCHHHHHHHHHHHHhhCCCCEEecC
Confidence 34444 33555565 4678888999998876422 110 000 1 1222234566777778888888889999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcC--CCcEEEEeCCC
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGGI 276 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~--~~iPVIanGgI 276 (436)
..|+. .+.+++.+.+.++. ++|+++|.+-+... ...|.- ....+-|.. .+-+..+++.. .+.-|++=-|-
T Consensus 86 d~Gyg--~~~~~~~~~v~~l~-~aGa~gv~iEd~~~~k~cgH~--~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda 160 (295)
T 1xg4_A 86 DIGFG--SSAFNVARTVKSMI-KAGAAGLHIEDQVGAKRSGHR--PNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDA 160 (295)
T ss_dssp TTCSS--SSHHHHHHHHHHHH-HHTCSEEEEECBCSSCCCTTS--SSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECC
T ss_pred CcccC--CCHHHHHHHHHHHH-HcCCeEEEECCCCCCcccCCC--CCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHH
Confidence 98853 23445555555554 69999999976541 001111 011122211 12233333332 23445554443
Q ss_pred CC-------HHHHHHHHHcCCCeeeeh
Q 013784 277 NT-------VDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 277 ~s-------~~da~~~l~~Gad~VmiG 296 (436)
.- .++++++.+.|||+|.+=
T Consensus 161 ~~~~gl~~ai~ra~ay~eAGAd~i~~e 187 (295)
T 1xg4_A 161 LAVEGLDAAIERAQAYVEAGAEMLFPE 187 (295)
T ss_dssp HHHHCHHHHHHHHHHHHHTTCSEEEET
T ss_pred hhhcCHHHHHHHHHHHHHcCCCEEEEe
Confidence 21 233444445899999983
No 337
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=91.54 E-value=1.3 Score=41.36 Aligned_cols=79 Identities=23% Similarity=0.110 Sum_probs=57.3
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC
Q 013784 196 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 275 (436)
Q Consensus 196 PvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg 275 (436)
+|..-+|. ++.+...++ ++.+.+.|++.|.+.-|+. ...+.+.++.+.+++ .+|+.|-
T Consensus 35 ~vv~Vir~--~~~~~a~~~----a~al~~gGi~~iEvt~~t~---------------~a~e~I~~l~~~~~~-~~iGaGT 92 (232)
T 4e38_A 35 KVIPVIAI--DNAEDIIPL----GKVLAENGLPAAEITFRSD---------------AAVEAIRLLRQAQPE-MLIGAGT 92 (232)
T ss_dssp CEEEEECC--SSGGGHHHH----HHHHHHTTCCEEEEETTST---------------THHHHHHHHHHHCTT-CEEEEEC
T ss_pred CEEEEEEc--CCHHHHHHH----HHHHHHCCCCEEEEeCCCC---------------CHHHHHHHHHHhCCC-CEEeECC
Confidence 45555665 333344443 3445579999999965542 126778888887755 6899999
Q ss_pred CCCHHHHHHHHHcCCCeeeeh
Q 013784 276 INTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 276 I~s~~da~~~l~~Gad~VmiG 296 (436)
|.+.++++.+++.||++|...
T Consensus 93 Vlt~~~a~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 93 ILNGEQALAAKEAGATFVVSP 113 (232)
T ss_dssp CCSHHHHHHHHHHTCSEEECS
T ss_pred cCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999865
No 338
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=91.32 E-value=1 Score=43.46 Aligned_cols=139 Identities=12% Similarity=0.109 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHCCCCEEE-ec---------CCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCC
Q 013784 136 LDNLAKATELANAYNYDEIN-LN---------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 205 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~Id-LN---------~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~ 205 (436)
.+.+....++.++.|...+. +. -.++.- ..|+..+.+.+++.++- .++.||.+|.-...
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~vd~~------kIgA~~~~n~~Ll~~~a-----~~~kPV~lk~G~~~ 143 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADVVDII------QLPAFLARQTDLVEAMA-----KTGAVINVKKPQFL 143 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSEE------EECGGGTTCHHHHHHHH-----HTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhcCCEE------EECcccccCHHHHHHHH-----cCCCcEEEeCCCCC
Confidence 45555556666677765332 11 123332 24888889988655543 45899999977632
Q ss_pred CCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe-----------C
Q 013784 206 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-----------G 274 (436)
Q Consensus 206 ~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan-----------G 274 (436)
+ .+ ++...+. .+...|.+.+++.=|...+ +.. + ..+++..+..+.+.++++||+.. |
T Consensus 144 t-~~---ei~~Av~-~i~~~Gn~~i~L~~rg~~~-~y~---~---~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~p~~~~ 211 (292)
T 1o60_A 144 S-PS---QMGNIVE-KIEECGNDKIILCDRGTNF-GYD---N---LIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFG 211 (292)
T ss_dssp C-GG---GHHHHHH-HHHHTTCCCEEEEECCEEC-STT---C---EECCTTHHHHHHHHTTSCCEEEEHHHHCC------
T ss_pred C-HH---HHHHHHH-HHHHcCCCeEEEEECCCCC-CCC---c---cccCHHHHHHHHhhCCCCCEEEECCCcccccCccc
Confidence 2 22 3333322 3456788666654343222 111 0 11345566667666557899982 2
Q ss_pred CCCCH------HHHHHHHHcCCCeeeehH
Q 013784 275 GINTV------DEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 275 gI~s~------~da~~~l~~Gad~VmiGR 297 (436)
+-... .-+.++...||+|+||=+
T Consensus 212 ~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~ 240 (292)
T 1o60_A 212 AASSGRRAQVTELARSGLAVGIAGLFLEA 240 (292)
T ss_dssp ------CTTHHHHHHHHHHHCCSEEEEEE
T ss_pred cCCCCChhHHHHHHHHHHHcCCCEEEEEe
Confidence 22222 333455668999999865
No 339
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.25 E-value=0.79 Score=44.38 Aligned_cols=92 Identities=20% Similarity=0.291 Sum_probs=59.0
Q ss_pred HHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 183 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 183 ~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
.+.++++++.. ..++.|- .++++++.+ ++ ++|+|.|-+..-+ .+.+.+.
T Consensus 197 ~~Av~~~r~~~p~~~ieVE-------vdtlde~~e----Al-~aGaD~I~LDn~~------------------~~~l~~a 246 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIE-------VETLDQLRT----AL-AHGARSVLLDNFT------------------LDMMRDA 246 (298)
T ss_dssp HHHHHHHHHHC--CCCEEE-------ESSHHHHHH----HH-HTTCEEEEEESCC------------------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEE-------eCCHHHHHH----HH-HcCCCEEEECCCC------------------HHHHHHH
Confidence 34555555543 3444433 235555544 22 3899998885321 2333333
Q ss_pred Hhc-CCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 262 LRD-FPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 262 ~~~-~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
++. ..++++.++||| +.+.+.++.++|+|.+.+|.....-|++
T Consensus 247 v~~i~~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~lt~sa~~l 290 (298)
T 3gnn_A 247 VRVTEGRAVLEVSGGV-NFDTVRAIAETGVDRISIGALTKDVRAT 290 (298)
T ss_dssp HHHHTTSEEEEEESSC-STTTHHHHHHTTCSEEECGGGGTSCCCC
T ss_pred HHHhCCCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCeecCCCcc
Confidence 332 247999999999 7889999999999999999966666664
No 340
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=91.13 E-value=2 Score=40.57 Aligned_cols=190 Identities=13% Similarity=0.146 Sum_probs=101.9
Q ss_pred CCcEEEcCCCCCCh-HHHHHHHHHcCC-CcE--EEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCC-HHHHHHH
Q 013784 68 PPWFSVAPMMDWTD-NHYRTLARLISK-HAW--LYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSN-LDNLAKA 142 (436)
Q Consensus 68 ~n~iilAPMagvtd-~~fr~~~~~~Gg-~gl--~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~-p~~~~~a 142 (436)
++++++|= ++++ .....++.+.++ ... +.++++...+. .-++.+.+ .+.++++=+--+| |...+.+
T Consensus 27 ~~~LivAL--D~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~----~~v~~Lk~---~g~~VflDlK~~DIpnTv~~a 97 (255)
T 3ldv_A 27 DPKVIVAL--DYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGP----DFVRELHK---RGFSVFLDLKFHDIPNTCSKA 97 (255)
T ss_dssp CCCEEEEE--CCSSHHHHHHHHTTSCGGGCEEEEEHHHHHHHHH----HHHHHHHH---TTCCEEEEEEECSCHHHHHHH
T ss_pred CCCeEEEc--CCCCHHHHHHHHHHhCCcCcEEEeCHHHHHhhCH----HHHHHHHh---cCCCEEEEEecccchhHHHHH
Confidence 44666552 4444 345555655542 223 34555543332 11222222 3567777775554 6666677
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cCCc----EEEEeccCCC------CCCcH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVP----VSVKCRIGVD------DHDSY 211 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~iP----vsvKiR~G~~------~~~~~ 211 (436)
++.+.++|+|.+.+|.. |+ .+.+...+++..+. .+.| |++.+...-. ...+.
T Consensus 98 ~~~~~~~gaD~vTVh~~------------~G-----~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~ 160 (255)
T 3ldv_A 98 VKAAAELGVWMVNVHAS------------GG-----ERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAP 160 (255)
T ss_dssp HHHHHHTTCSEEEEEGG------------GC-----HHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCH
T ss_pred HHHHHhcCCCEEEEecc------------CC-----HHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCH
Confidence 78888999999999852 21 23455555554332 1223 3333332100 01223
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH-H---------
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD-E--------- 281 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~-d--------- 281 (436)
.+....+++...++|++.+++.+.+ ...+++.... +. ++...||.-.. +
T Consensus 161 ~~~V~~~A~~a~~aG~~GvV~sa~e------------------~~~iR~~~g~--~f-l~VtPGIr~qg~~~~dQ~Rv~t 219 (255)
T 3ldv_A 161 QDHVLRLATLTKNAGLDGVVCSAQE------------------ASLLKQHLGR--EF-KLVTPGIRPAGSEQGDQRRIMT 219 (255)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCHHH------------------HHHHHHHHCT--TS-EEEEECCCCTTSTTSSCSSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECHHH------------------HHHHHHhcCC--Cc-EEEeCCcccCcCCccceeccCC
Confidence 3344445666677999999875321 2333333221 23 55556664211 1
Q ss_pred HHHHHHcCCCeeeehHHHHhCCc
Q 013784 282 VNAALRKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 282 a~~~l~~Gad~VmiGRa~l~~P~ 304 (436)
..++++.|||.+.+||+++..++
T Consensus 220 ~~~a~~aGad~iVvGr~I~~a~d 242 (255)
T 3ldv_A 220 PAQAIASGSDYLVIGRPITQAAH 242 (255)
T ss_dssp HHHHHHTTCSEEEECHHHHTCSC
T ss_pred HHHHHHcCCCEEEECHHHhCCCC
Confidence 45677899999999999998766
No 341
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.11 E-value=11 Score=36.10 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=92.1
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe--
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC-- 201 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi-- 201 (436)
..|+++.+.+++.++-.+.++.+++.|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+=-
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV--APYYN--K---------PTQQGLYEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 6799999999999999999999999999998775 44421 1 2346678888888888899987653
Q ss_pred -ccCCCCCCcHHHHHHHHHHHhhc-CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 202 -RIGVDDHDSYNQLCDFIYKVSSL-SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 202 -R~G~~~~~~~~~~~~~la~~~e~-~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
|.|.+- +.+.+ .++++. -.+-+|--.. | ++..+.++++...++.| .+|+=
T Consensus 144 ~~tg~~l--~~~~~----~~La~~~pnivgiKdss------g------------d~~~~~~~~~~~~~f~v-~~G~d--- 195 (301)
T 3m5v_A 144 GRTGCEI--STDTI----IKLFRDCENIYGVKEAS------G------------NIDKCVDLLAHEPRMML-ISGED--- 195 (301)
T ss_dssp HHHSCCC--CHHHH----HHHHHHCTTEEEEEECS------S------------CHHHHHHHHHHCTTSEE-EECCG---
T ss_pred hhhCcCC--CHHHH----HHHHhcCCCEEEEEeCC------C------------CHHHHHHHHHhCCCeEE-EEccH---
Confidence 445443 23333 233333 2333333211 1 14455555554445544 66641
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.+.+-+ .|..+.+-.+
T Consensus 196 ~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~ 226 (301)
T 3m5v_A 196 AINYPILSNGGKGVISVTSNL-LPDMISALTH 226 (301)
T ss_dssp GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEehHHHh-hHHHHHHHHH
Confidence 235567778999999888753 4665444333
No 342
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=91.07 E-value=1.3 Score=43.87 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHCCCCEEE-ecC---------CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCC
Q 013784 136 LDNLAKATELANAYNYDEIN-LNC---------GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 205 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~Id-LN~---------gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~ 205 (436)
.+.+....+.+++.|...+. +.- -++.- ..|+..+.+.+++.++- .++.||.+|.-..
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~vd~l------kIgAr~~~n~~LL~~va-----~~~kPVilk~G~~- 223 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADII------QIGARNAQNFRLLSKAG-----SYNKPVLLKRGFM- 223 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEE------EECGGGTTCHHHHHHHH-----TTCSCEEEECCTT-
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhCCEE------EECcccccCHHHHHHHH-----ccCCcEEEcCCCC-
Confidence 56677777777777765332 210 02322 24888889988877665 4589999987653
Q ss_pred CCCCcHHHHHHHHHHHhhcCCccEEEE--ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----CCCCC-
Q 013784 206 DDHDSYNQLCDFIYKVSSLSPTRHFII--HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINT- 278 (436)
Q Consensus 206 ~~~~~~~~~~~~la~~~e~~Gvd~I~v--hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan----GgI~s- 278 (436)
.+.+++...+.. +...|...+++ +|-+. +.+ .....+++..+..+.+.+ ++||++. +|-.+
T Consensus 224 ---~tl~ei~~Ave~-i~~~GN~~viLceRG~~t-yp~------~~~~~vdl~ai~~lk~~~-~lpVi~dssHs~G~~~~ 291 (350)
T 1vr6_A 224 ---NTIEEFLLSAEY-IANSGNTKIILCERGIRT-FEK------ATRNTLDISAVPIIRKES-HLPILVDPSHSGGRRDL 291 (350)
T ss_dssp ---CCHHHHHHHHHH-HHHTTCCCEEEEECCBCC-SCC------SSSSBCCTTHHHHHHHHB-SSCEEECHHHHHCSGGG
T ss_pred ---CCHHHHHHHHHH-HHHCCCCeEEEEeCCCCC-CCC------cChhhhhHHHHHHHHHhh-CCCEEEeCCCCCcccch
Confidence 234455444333 34578766665 33221 111 112234466666776655 7898772 23333
Q ss_pred -HHHHHHHHHcCCCeeeehH
Q 013784 279 -VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 279 -~~da~~~l~~Gad~VmiGR 297 (436)
..-..+++..||+|+||=+
T Consensus 292 v~~~a~AAvA~GA~Gl~IE~ 311 (350)
T 1vr6_A 292 VIPLSRAAIAVGAHGIIVEV 311 (350)
T ss_dssp HHHHHHHHHHHTCSEEEEEB
T ss_pred HHHHHHHHHHhCCCEEEEEe
Confidence 4445566678999999865
No 343
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=90.99 E-value=0.22 Score=51.55 Aligned_cols=63 Identities=25% Similarity=0.346 Sum_probs=48.1
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.+.++|+|.|.+|... |.. ...++.+..+++.++++||++ |++.+.+++..+.+.|+|+|.+|
T Consensus 244 ~l~~aGvd~v~i~~~~----G~~--------~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 244 KLVKAGVDVIVIDTAH----GHS--------RRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHTTCSEEEECCSC----CSS--------HHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhCCCEEEEEecC----Cch--------HHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 4456999999997531 211 112677888888776799877 78899999999999999999984
No 344
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=90.86 E-value=12 Score=35.90 Aligned_cols=148 Identities=11% Similarity=0.022 Sum_probs=91.2
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++..+.++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=-
T Consensus 67 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 67 QGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCV--AGYYN-------R----PSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEEC--CCTTT-------C----CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC-------C----CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 346799999999999999999999999999998765 34421 1 2346677888888888899987653
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 277 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~ 277 (436)
|.|.+- +.+.+ .++++.-.+-+|--.. | ++..+.++++..+ ++. +.+|+=
T Consensus 134 ~P~~tg~~l--~~~~~----~~La~~pnIvgiKds~------g------------d~~~~~~~~~~~~~~f~-v~~G~d- 187 (297)
T 2rfg_A 134 IPPRAVVDI--KPETM----ARLAALPRIVGVKDAT------T------------DLARISRERMLINKPFS-FLSGDD- 187 (297)
T ss_dssp CHHHHSCCC--CHHHH----HHHHTSTTEEEEEECS------C------------CTTHHHHHHTTCCSCCE-EEESCG-
T ss_pred CccccCCCC--CHHHH----HHHHcCCCEEEEEeCC------C------------CHHHHHHHHHhcCCCEE-EEeCcH-
Confidence 345433 23333 3333322233332111 1 0233345554433 343 466641
Q ss_pred CHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 278 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 278 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.|.+-+ -|..+.+-.+
T Consensus 188 --~~~l~~l~~G~~G~is~~an~-~P~~~~~l~~ 218 (297)
T 2rfg_A 188 --MTAIAYNASGGQGCISVSANI-APALYGQMQT 218 (297)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHH
T ss_pred --HHHHHHHHCCCCEEEecHHHh-hHHHHHHHHH
Confidence 235567779999999998764 3666544333
No 345
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=90.81 E-value=1.1 Score=41.56 Aligned_cols=80 Identities=14% Similarity=0.186 Sum_probs=52.8
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHh
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~ 301 (436)
...+.+.|.+-.|... |.+-.- ....+-..+.+.++++.. .+++|+.-|||.+.+++..+...|+||+.||++++.
T Consensus 134 ~~~~~~iIayep~wai--GtG~~v-~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 134 AALNPDYVAVEPPELI--GTGIPV-SKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp HTTCCSEEEECCTTTT--TTSCCT-TTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred hcCCCCEEEEeChhhh--ccCCCC-CCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHC
Confidence 3456777777666543 332000 000111133334444443 368999999999999999999999999999999998
Q ss_pred CCcc
Q 013784 302 NPWY 305 (436)
Q Consensus 302 ~P~l 305 (436)
-+++
T Consensus 211 a~~~ 214 (225)
T 1hg3_A 211 AKDP 214 (225)
T ss_dssp CSSH
T ss_pred CcCH
Confidence 8773
No 346
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=90.76 E-value=1.3 Score=43.01 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=64.0
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEeccCCC-CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccH
Q 013784 177 LDPKFVGEAMSVIAANTNVPVSVKCRIGVD-DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY 255 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~~iPvsvKiR~G~~-~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~ 255 (436)
..++.+.+.++.+++.++.|+.|-+-.... ...++++.++ .+.+.|+|.|++|+.. | .
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~----~~~~~g~d~V~~~~g~---------------p--~ 108 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRA----AIIEAGIRVVETAGND---------------P--G 108 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHH----HHHHTTCCEEEEEESC---------------C--H
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHH----HHHhcCCCEEEEcCCC---------------c--H
Confidence 347778888888888777787665443210 0123434333 3346899999998521 1 3
Q ss_pred HHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee-hH
Q 013784 256 EYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 297 (436)
Q Consensus 256 ~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi-GR 297 (436)
+++..+.+ . ++||+. ++.+.+++.++.+.|+|+|.+ |+
T Consensus 109 ~~~~~l~~-~-gi~vi~--~v~t~~~a~~~~~~GaD~i~v~g~ 147 (328)
T 2gjl_A 109 EHIAEFRR-H-GVKVIH--KCTAVRHALKAERLGVDAVSIDGF 147 (328)
T ss_dssp HHHHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred HHHHHHHH-c-CCCEEe--eCCCHHHHHHHHHcCCCEEEEECC
Confidence 45555544 3 788885 488999999999999999998 54
No 347
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=90.76 E-value=1 Score=44.20 Aligned_cols=94 Identities=13% Similarity=0.081 Sum_probs=59.2
Q ss_pred ccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEE
Q 013784 192 NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFT 271 (436)
Q Consensus 192 ~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVI 271 (436)
..+.|+.+.+..|++. +++ .+.++..|+|+|.+|...... ...+..+..... -++.+.++++.. ++||+
T Consensus 114 ~~~~pv~~~i~~~~~~----~~~----~~~~~~~gad~i~i~~~~~~~-~~~~~~~~~~~~-~~~~i~~vr~~~-~~Pv~ 182 (349)
T 1p0k_A 114 NPNGLIFANLGSEATA----AQA----KEAVEMIGANALQIHLNVIQE-IVMPEGDRSFSG-ALKRIEQICSRV-SVPVI 182 (349)
T ss_dssp CSSSCEEEEEETTCCH----HHH----HHHHHHTTCSEEEEEECTTTT-C--------CTT-HHHHHHHHHHHC-SSCEE
T ss_pred CCCceeEEeecCCCCH----HHH----HHHHHhcCCCeEEecccchhh-hcCCCCCcchHH-HHHHHHHHHHHc-CCCEE
Confidence 4578988887765432 222 234567899999998653211 111100111110 256677777665 89998
Q ss_pred Ee--CCCCCHHHHHHHHHcCCCeeeeh
Q 013784 272 LN--GGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 272 an--GgI~s~~da~~~l~~Gad~VmiG 296 (436)
.- |...+.+++..+.+.|||+|.+.
T Consensus 183 vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 183 VKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp EEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred EEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 75 56678999999999999999984
No 348
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=90.56 E-value=11 Score=34.99 Aligned_cols=95 Identities=11% Similarity=0.086 Sum_probs=61.3
Q ss_pred cEEEEEcC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 126 PIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
.+++-|.+ .+.+++.+.++.+.+.|+|.||+=.-+=. . .+.+.+.+.+..+++.. ++|+.+=+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~-------~------~~~~~v~~~~~~lr~~~~~~PiI~T~R~ 71 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFE-------N------VTVDQVAEMITKLKVMQDSFKLLVTYRT 71 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTST-------T------CCHHHHHHHHHHHC---CCSEEEEECCB
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccc-------c------CCHHHHHHHHHHHHHhccCCCEEEEeec
Confidence 47888999 99988887788788889999999753311 1 14677889999998877 7898877776
Q ss_pred CCCC---CCcHHHHHHHHHHHhhcCCccEEEEc
Q 013784 204 GVDD---HDSYNQLCDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 204 G~~~---~~~~~~~~~~la~~~e~~Gvd~I~vh 233 (436)
-++. ..+.++-.+.+..+++..++|+|.|-
T Consensus 72 ~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvE 104 (238)
T 1sfl_A 72 KLQGGYGQFTNDSYLNLISDLANINGIDMIDIE 104 (238)
T ss_dssp GGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEE
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3321 12233344555555554479999985
No 349
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=90.56 E-value=5 Score=37.83 Aligned_cols=127 Identities=13% Similarity=0.113 Sum_probs=73.8
Q ss_pred HHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc-CCCC---CCcHHHHHHH
Q 013784 142 ATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI-GVDD---HDSYNQLCDF 217 (436)
Q Consensus 142 aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~-G~~~---~~~~~~~~~~ 217 (436)
.|..+++.|+|-|||+.+-.. | | +--...+ ++.+++.+++||-|-+|+ |-+- ..+++.+.+-
T Consensus 13 ~a~~A~~~GAdRIELc~~L~~------G--G--lTPS~g~----i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~D 78 (256)
T 1twd_A 13 CALTAQQNGADRVELCAAPKE------G--G--LTPSLGV----LKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILED 78 (256)
T ss_dssp HHHHHHHTTCSEEEECBCGGG------T--C--BCCCHHH----HHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCccc------C--C--CCCCHHH----HHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 456677899999999853211 1 1 1222233 344456678999999998 2221 1234444444
Q ss_pred HHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC---CCCHHHHHHHHH-cCCCee
Q 013784 218 IYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTVDEVNAALR-KGAHHV 293 (436)
Q Consensus 218 la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg---I~s~~da~~~l~-~Gad~V 293 (436)
+ +.+.+.|+|.|.+=.-+. + +.++.+...++++.....||...=- +.|+..+.+.+. .|++.|
T Consensus 79 i-~~~~~~GadGvV~G~Lt~--------d----g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 79 V-RTVRELGFPGLVTGVLDV--------D----GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp H-HHHHHTTCSEEEECCBCT--------T----SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred H-HHHHHcCCCEEEEeeECC--------C----CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 3 345679999998732221 1 2344666667765544667765432 356666655554 788887
Q ss_pred ee
Q 013784 294 MV 295 (436)
Q Consensus 294 mi 295 (436)
.-
T Consensus 146 LT 147 (256)
T 1twd_A 146 LT 147 (256)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 350
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.45 E-value=6.4 Score=38.36 Aligned_cols=159 Identities=14% Similarity=0.106 Sum_probs=86.9
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCC-CCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEE
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCG-CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~g-cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvK 200 (436)
.+.|+. =+...|. -.|++++++|||.|=+.-. .-. ... | |-....-..+.+.+.++.|...+ ++||.+=
T Consensus 37 ~~~~i~-~~~ayD~----~sA~i~e~aGfdai~vs~~~~a~-~~l--G-~pD~~~vt~~em~~~~~~I~r~~~~~PviaD 107 (318)
T 1zlp_A 37 EHGSVL-MPGVQDA----LSAAVVEKTGFHAAFVSGYSVSA-AML--G-LPDFGLLTTTEVVEATRRITAAAPNLCVVVD 107 (318)
T ss_dssp HSSSEE-EEEECSH----HHHHHHHHTTCSEEEECHHHHHH-HHH--C-CCSSSCSCHHHHHHHHHHHHHHSSSSEEEEE
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEECcHHHhh-Hhc--C-CCCCCCCCHHHHHHHHHHHHhhccCCCEEEe
Confidence 344433 3455555 4678889999999877531 110 000 1 11112345566777778888877 8999999
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcC--CCcEEEEeCC
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGG 275 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~--~~iPVIanGg 275 (436)
+..|+. +.+++.+.+.++. ++|+++|.+-+... ...|.- ....+-|.. .+-+..+++.. .+.-|++=.|
T Consensus 108 ~d~Gyg---~~~~v~~tv~~l~-~aGaagv~iED~~~~k~cgH~--~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtd 181 (318)
T 1zlp_A 108 GDTGGG---GPLNVQRFIRELI-SAGAKGVFLEDQVWPKKCGHM--RGKAVVPAEEHALKIAAAREAIGDSDFFLVARTD 181 (318)
T ss_dssp CTTCSS---SHHHHHHHHHHHH-HTTCCEEEEECBCSSCCCSSS--SCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEEC
T ss_pred CCCCCC---CHHHHHHHHHHHH-HcCCcEEEECCCCCCccccCC--CCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeH
Confidence 999954 4455566555554 59999999976541 001111 011222211 11233333322 3455666555
Q ss_pred CCCH-------HHHHHHHHcCCCeeeeh
Q 013784 276 INTV-------DEVNAALRKGAHHVMVG 296 (436)
Q Consensus 276 I~s~-------~da~~~l~~Gad~VmiG 296 (436)
-.-. ++++++.+.|||+|.+=
T Consensus 182 a~a~~gl~~ai~Ra~Ay~eAGAd~i~~e 209 (318)
T 1zlp_A 182 ARAPHGLEEGIRRANLYKEAGADATFVE 209 (318)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HhhhcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 4322 23333444899999883
No 351
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=90.39 E-value=4 Score=39.06 Aligned_cols=126 Identities=12% Similarity=0.049 Sum_probs=75.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~~~ 212 (436)
|.+.+.+.+++..+.|+|+|-++.. +|+ +.. -..+.-.++++.+++.+ .+||.+-+.. .+..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~--Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-----~~t~ 82 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT--------TGE-SPT--LSKSEHEQVVEITIKTANGRVPVIAGAGS-----NSTA 82 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG--------GGT-GGG--SCHHHHHHHHHHHHHHHTTSSCBEEECCC-----SSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHhCCCCcEEEecCC-----ccHH
Confidence 6678888889888899999866531 233 222 23344455666655543 4777664432 2334
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE------eCCCCCHHHHHHHH
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL------NGGINTVDEVNAAL 286 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa------nGgI~s~~da~~~l 286 (436)
+..+. ++.+++.|+|++-+.. ..|...+. ..-++++.++.+.. ++|||. .|--.+++.+.++.
T Consensus 83 ~ai~l-a~~A~~~Gadavlv~~--P~y~~~s~-------~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~~~~~~~La 151 (292)
T 2vc6_A 83 EAIAF-VRHAQNAGADGVLIVS--PYYNKPTQ-------EGIYQHFKAIDAAS-TIPIIVYNIPGRSAIEIHVETLARIF 151 (292)
T ss_dssp HHHHH-HHHHHHTTCSEEEEEC--CCSSCCCH-------HHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHH-HHHHHHcCCCEEEEcC--CCCCCCCH-------HHHHHHHHHHHHhC-CCCEEEEeCccccCcCCCHHHHHHHH
Confidence 44443 5667889999998753 21111110 01155666777765 899876 46556888887776
Q ss_pred H
Q 013784 287 R 287 (436)
Q Consensus 287 ~ 287 (436)
+
T Consensus 152 ~ 152 (292)
T 2vc6_A 152 E 152 (292)
T ss_dssp H
T ss_pred h
Confidence 5
No 352
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.36 E-value=3.3 Score=39.83 Aligned_cols=159 Identities=12% Similarity=0.041 Sum_probs=88.2
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.+.|+. =+...|. -.|++++++|||.|=+.-.+=..... | |-....-..+.+...+++|...+++||.+=+.
T Consensus 19 ~~~~i~-~~~a~D~----~sA~i~e~aGf~ai~vs~s~~a~~~l--G-~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d 90 (287)
T 3b8i_A 19 SSRCYH-TASVFDP----MSARIAADLGFECGILGGSVASLQVL--A-APDFALITLSEFVEQATRIGRVARLPVIADAD 90 (287)
T ss_dssp SSCCEE-CEECCSH----HHHHHHHHTTCSCEEECHHHHHHHHH--S-CCSSSCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEeCcHHHHHHhc--C-CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 444443 3555565 46788899999988764210000000 1 11112245667777888888888999999888
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcC--CCcEEEEeCCCC
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGGIN 277 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~--~~iPVIanGgI~ 277 (436)
.|+. +.+++.+.+.++. ++|+++|.+-+... ...|.. ... +-+.. .+.+..+++.. ++.-|++=-|-.
T Consensus 91 ~Gyg---~~~~~~~~v~~l~-~aGa~gv~iED~~~pKrcgh~--~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa 163 (287)
T 3b8i_A 91 HGYG---NALNVMRTVVELE-RAGIAALTIEDTLLPAQFGRK--STD-LICVEEGVGKIRAALEARVDPALTIIARTNAE 163 (287)
T ss_dssp TCSS---SHHHHHHHHHHHH-HHTCSEEEEECBCCSCCTTTC--TTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETT
T ss_pred CCCC---CHHHHHHHHHHHH-HhCCeEEEEcCCCCccccCCC--CCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechhh
Confidence 8854 4455666555554 59999999976542 111221 112 22211 22233444432 245566544431
Q ss_pred ------CHHHHHHHHHcCCCeeeeh
Q 013784 278 ------TVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 278 ------s~~da~~~l~~Gad~VmiG 296 (436)
-.++++++.+.|||+|.+=
T Consensus 164 ~~gl~~ai~Ra~ay~eAGAd~i~~e 188 (287)
T 3b8i_A 164 LIDVDAVIQRTLAYQEAGADGICLV 188 (287)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEec
Confidence 1233444445899999884
No 353
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=90.30 E-value=5.7 Score=39.21 Aligned_cols=119 Identities=8% Similarity=0.032 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCcHHHH
Q 013784 137 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 137 ~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~~~ 214 (436)
++.++.+....+.||+.+-+..|. +++.-.+.++++|++++ +.+.+=.--+|+ ..+.
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~g~-----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~----~~~A 204 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKIGF-----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYT----VTEA 204 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS-----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCC----HHHH
T ss_pred HHHHHHHHHHHHhccceecccccC-----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccC----HHHH
Confidence 444444444456799988776431 24445567788888764 344443333443 3444
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CCCee
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GAHHV 293 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Gad~V 293 (436)
.++ .+.+++.++.+|- . .+++.+++...++.+.. ++||.+-=.+.+..++.++++. .+|.|
T Consensus 205 ~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a~d~i 266 (378)
T 4hpn_A 205 ITL-GDRAAGFGIDWFE----E------------PVVPEQLDAYARVRAGQ-PIPVAGGETWHGRYGMWQALSAGAVDIL 266 (378)
T ss_dssp HHH-HHHHGGGCCSCEE----C------------CSCTTCHHHHHHHHHHS-SSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred HHH-Hhhhhhcccchhh----c------------CCCccchhhhHHHHhhC-CceeeCCcCccchHhHHHHHHcCCCCEE
Confidence 443 4456777776654 1 12333477777777775 8999998899999999999985 46776
Q ss_pred e
Q 013784 294 M 294 (436)
Q Consensus 294 m 294 (436)
+
T Consensus 267 ~ 267 (378)
T 4hpn_A 267 Q 267 (378)
T ss_dssp C
T ss_pred e
Confidence 5
No 354
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=90.30 E-value=3.3 Score=39.80 Aligned_cols=140 Identities=15% Similarity=0.169 Sum_probs=85.7
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 205 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~ 205 (436)
.+.+-++..+.+. +..+++.|+|-|||+.+-.. | .+--.+ .+++.+++.+++||-+-+|+--
T Consensus 39 ~~~lEvc~~s~~~----a~~A~~gGAdRIELc~~l~~---------G-GlTPS~----g~i~~a~~~~~ipV~vMIRPRg 100 (287)
T 3iwp_A 39 GFLMEVCVDSVES----AVNAERGGADRIELCSGLSE---------G-GTTPSM----GVLQVVKQSVQIPVFVMIRPRG 100 (287)
T ss_dssp CSEEEEEESSHHH----HHHHHHHTCSEEEECBCGGG---------T-CBCCCH----HHHHHHHTTCCSCEEEECCSSS
T ss_pred CceEEEEeCCHHH----HHHHHHhCCCEEEECCCCCC---------C-CCCCCH----HHHHHHHHhcCCCeEEEEecCC
Confidence 3677888888764 44556789999999843211 1 111222 3445556667899999888721
Q ss_pred CC----CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCC---CC
Q 013784 206 DD----HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI---NT 278 (436)
Q Consensus 206 ~~----~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI---~s 278 (436)
.+ ..+++.+.+.+. .+.++|+|.|+++.-+. + ..++.+...++++....++|..+=-+ .|
T Consensus 101 GdF~Ys~~E~~~M~~dI~-~~~~~GAdGvVfG~L~~--------d----g~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d 167 (287)
T 3iwp_A 101 GDFLYSDREIEVMKADIR-LAKLYGADGLVFGALTE--------D----GHIDKELCMSLMAICRPLPVTFHRAFDMVHD 167 (287)
T ss_dssp SCSCCCHHHHHHHHHHHH-HHHHTTCSEEEECCBCT--------T----SCBCHHHHHHHHHHHTTSCEEECGGGGGCSC
T ss_pred CCcccCHHHHHHHHHHHH-HHHHcCCCEEEEeeeCC--------C----CCcCHHHHHHHHHHcCCCcEEEECchhccCC
Confidence 11 123444444443 45569999999975432 1 12346666677665446788877653 35
Q ss_pred HHHHHHHHH-cCCCeeeeh
Q 013784 279 VDEVNAALR-KGAHHVMVG 296 (436)
Q Consensus 279 ~~da~~~l~-~Gad~VmiG 296 (436)
+..+.+.+. +|++.|.-+
T Consensus 168 ~~~Ale~Li~lGvdrILTS 186 (287)
T 3iwp_A 168 PMAALETLLTLGFERVLTS 186 (287)
T ss_dssp HHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEECC
Confidence 666666554 799988863
No 355
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.29 E-value=0.4 Score=46.20 Aligned_cols=86 Identities=12% Similarity=-0.007 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhc-CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSL-SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~-~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l-- 286 (436)
.+.+.+.+.. +.+ .|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 23 ~~~l~~lv~~-li~~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~ 94 (293)
T 1f6k_A 23 EKGLRQIIRH-NIDKMKVDGLYVGGSTGENFMLSTEE-------KKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKY 94 (293)
T ss_dssp HHHHHHHHHH-HHHTSCCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHhhCCCcEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHH
Confidence 4444444443 345 8999999998775322232211 133344444332 369997544444444444333
Q ss_pred --HcCCCeeeehHHHHhCCc
Q 013784 287 --RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 --~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 95 a~~~Gadavlv~~P~y~~~~ 114 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFYYKFS 114 (293)
T ss_dssp HHHHTCSEEEEECCCSSCCC
T ss_pred HHhcCCCEEEECCCCCCCCC
Confidence 379999999988887775
No 356
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.20 E-value=0.63 Score=47.02 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=43.9
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++|+|.|.+... .|.+ ....+.+.++++.+ ++|||+ |+|.+.+++..+.+.|||+|.+|
T Consensus 152 lveaGvdvIvldta----~G~~--------~~~~e~I~~ik~~~-~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 152 LVEAGVDVIVLDSA----HGHS--------LNIIRTLKEIKSKM-NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHTCSEEEECCS----CCSB--------HHHHHHHHHHHTTC-CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCCEEEEeCC----CCCc--------ccHHHHHHHHHhcC-CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 34589999987321 0211 11145666776665 889886 78899999999999999999996
No 357
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=90.18 E-value=1.6 Score=41.42 Aligned_cols=138 Identities=16% Similarity=0.120 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHCCCCEE-EecCC---------CCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCC
Q 013784 136 LDNLAKATELANAYNYDEI-NLNCG---------CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 205 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~I-dLN~g---------cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~ 205 (436)
.+++..+.++.++.|...+ ++.-- ++.- ..|+..+.+..++.++.+ .++||.+|....
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~~------kIga~~~~n~~ll~~~a~-----~~kPV~lk~G~~- 140 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYSDIL------QIGARNSQNFELLKEVGK-----VENPVLLKRGMG- 140 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEE------EECGGGTTCHHHHHHHTT-----SSSCEEEECCTT-
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhCCEE------EECcccccCHHHHHHHHh-----cCCcEEEecCCC-
Confidence 6666666677777775532 22100 2222 247777788777666543 699999986653
Q ss_pred CCCCcHHHHHHHHHHHhhcCCccEEEE-c-cCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----CCCCC-
Q 013784 206 DDHDSYNQLCDFIYKVSSLSPTRHFII-H-SRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN----GGINT- 278 (436)
Q Consensus 206 ~~~~~~~~~~~~la~~~e~~Gvd~I~v-h-grt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan----GgI~s- 278 (436)
.+.+++...+. .+...|...+++ | |.+.. .+ .....+++..+..+.+.+ ++|||+. +|..+
T Consensus 141 ---~t~~e~~~Av~-~i~~~Gn~~i~L~~RG~~~~-~~------y~~~~v~L~ai~~lk~~~-~~pVi~d~sH~~g~~~~ 208 (262)
T 1zco_A 141 ---NTIQELLYSAE-YIMAQGNENVILCERGIRTF-ET------ATRFTLDISAVPVVKELS-HLPIIVDPSHPAGRRSL 208 (262)
T ss_dssp ---CCHHHHHHHHH-HHHTTTCCCEEEEECCBCCS-CC------SSSSBCCTTHHHHHHHHB-SSCEEECSSTTTCSGGG
T ss_pred ---CCHHHHHHHHH-HHHHCCCCeEEEEECCCCCC-CC------cChhhcCHHHHHHHHhhh-CCCEEEEcCCCCCccch
Confidence 14555555443 445678755554 5 21110 01 111223455666666654 7898764 33322
Q ss_pred -HHHHHHHHHcCCCeeeehH
Q 013784 279 -VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 279 -~~da~~~l~~Gad~VmiGR 297 (436)
..-+.++...||+|+||=+
T Consensus 209 v~~~~~aAva~Ga~Gl~iE~ 228 (262)
T 1zco_A 209 VIPLAKAAYAIGADGIMVEV 228 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEEB
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 1234556679999999865
No 358
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.10 E-value=5 Score=37.09 Aligned_cols=129 Identities=11% Similarity=0.113 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHH
Q 013784 137 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCD 216 (436)
Q Consensus 137 ~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~ 216 (436)
+.+.+-++.+.++|+|+|-+.+--|.. . -|.+.+.+++++.. +.|++.-.........+..+..+
T Consensus 76 ~~M~~Di~~~~~~GadGvV~G~Lt~dg------~------iD~~~~~~Li~~a~---~~~vTFHRAFD~~~~~d~~~ale 140 (224)
T 2bdq_A 76 RIMEEDILRAVELESDALVLGILTSNN------H------IDTEAIEQLLPATQ---GLPLVFHMAFDVIPKSDQKKSID 140 (224)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCBCTTS------S------BCHHHHHHHHHHHT---TCCEEECGGGGGSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeECCCC------C------cCHHHHHHHHHHhC---CCeEEEECchhccCCcCHHHHHH
Confidence 445556667889999999877543332 2 46778888887653 67777654432110022222222
Q ss_pred HHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHH-cCCCeee
Q 013784 217 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR-KGAHHVM 294 (436)
Q Consensus 217 ~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~-~Gad~Vm 294 (436)
++.+.|++.|--||.... . ++ ....+.+.++++.. .++-|++-|||+ .+.+.+.++ +|++.+=
T Consensus 141 ----~L~~lGv~rILTSG~~~~---~-~a------~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~~l~~~tGv~e~H 205 (224)
T 2bdq_A 141 ----QLVALGFTRILLHGSSNG---E-PI------IENIKHIKALVEYANNRIEIMVGGGVT-AENYQYICQETGVKQAH 205 (224)
T ss_dssp ----HHHHTTCCEEEECSCSSC---C-CG------GGGHHHHHHHHHHHTTSSEEEECSSCC-TTTHHHHHHHHTCCEEE
T ss_pred ----HHHHcCCCEEECCCCCCC---C-cH------HHHHHHHHHHHHhhCCCeEEEeCCCCC-HHHHHHHHHhhCCCEEc
Confidence 334589999987764421 0 01 11256666776532 368888889995 577777775 8998877
Q ss_pred e
Q 013784 295 V 295 (436)
Q Consensus 295 i 295 (436)
.
T Consensus 206 ~ 206 (224)
T 2bdq_A 206 G 206 (224)
T ss_dssp E
T ss_pred c
Confidence 4
No 359
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=89.93 E-value=0.8 Score=44.31 Aligned_cols=92 Identities=11% Similarity=0.134 Sum_probs=58.0
Q ss_pred HHHHHHHhhcc-CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 183 GEAMSVIAANT-NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 183 ~eiv~av~~~~-~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
.+.++++++.. ..||.|-+ ++.+++.+. + ++|+|.|-+..-+ .+.+.+.
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv-------~tl~e~~eA----l-~aGaDiImLDn~s------------------~~~l~~a 244 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIEC-------DNISQVEES----L-SNNVDMILLDNMS------------------ISEIKKA 244 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEE-------SSHHHHHHH----H-HTTCSEEEEESCC------------------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEE-------CCHHHHHHH----H-HcCCCEEEECCCC------------------HHHHHHH
Confidence 34555555543 34554422 345555442 2 4899988874211 2333333
Q ss_pred HhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcc
Q 013784 262 LRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWY 305 (436)
Q Consensus 262 ~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~l 305 (436)
++.. .++.+.++||| +.+.+.++.++|+|.+.+|.-...-|++
T Consensus 245 v~~~~~~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 245 VDIVNGKSVLEVSGCV-NIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp HHHHTTSSEEEEESSC-CTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred HHhhcCceEEEEECCC-CHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 3321 37899999999 7899999999999999999655555664
No 360
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=89.90 E-value=1.3 Score=40.62 Aligned_cols=132 Identities=13% Similarity=0.054 Sum_probs=86.1
Q ss_pred CCCCcEEEEEcCCC----HH--HHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCC
Q 013784 122 PEQHPIVLQIGGSN----LD--NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNV 195 (436)
Q Consensus 122 ~~~~pi~vQL~g~~----p~--~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~i 195 (436)
...-++++|....+ ++ .+.+.++.+.+.|+++|.++ .+ +.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--------------------~~----~~i~~i~~~~~~ 70 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--------------------SV----RDIKEIQAITDL 70 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--------------------SH----HHHHHHHTTCCS
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--------------------CH----HHHHHHHHhCCC
Confidence 45667788887755 57 78888888999999999775 12 346777788899
Q ss_pred cEEEEeccCCCCC-----CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEE
Q 013784 196 PVSVKCRIGVDDH-----DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTF 270 (436)
Q Consensus 196 PvsvKiR~G~~~~-----~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPV 270 (436)
|+...++.++.+. ...+++ . .+.++|+|.|++|.... +. + + .....+.+..+.+.+++++|
T Consensus 71 p~i~~~~~~~~~~~~~i~~~~~~i----~-~~~~~Gad~V~l~~~~~---~~-~-~----~~~~~~~i~~i~~~~~~~~v 136 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFITATMTEV----D-QLAALNIAVIAMDCTKR---DR-H-D----GLDIASFIRQVKEKYPNQLL 136 (234)
T ss_dssp CEEEECBCCCTTSCCCBSCSHHHH----H-HHHTTTCSEEEEECCSS---CC-T-T----CCCHHHHHHHHHHHCTTCEE
T ss_pred CEEeeEcCCCCccccccCChHHHH----H-HHHHcCCCEEEEccccc---CC-C-C----CccHHHHHHHHHHhCCCCeE
Confidence 9833233332211 122222 2 23469999999986432 10 0 0 00114566666666557776
Q ss_pred EEeCCCCCHHHHHHHHHcCCCee
Q 013784 271 TLNGGINTVDEVNAALRKGAHHV 293 (436)
Q Consensus 271 IanGgI~s~~da~~~l~~Gad~V 293 (436)
+. ++.+.+++.++.+.|+|.|
T Consensus 137 ~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 137 MA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEE
T ss_pred EE--eCCCHHHHHHHHHcCCCEE
Confidence 65 6889999999999999999
No 361
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.85 E-value=14 Score=35.38 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=111.9
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
++.|+. .+.-..++.++. +.|-.|+++.+...--..+...++ ++...+......|+++.+.+++.++-.+.
T Consensus 23 ~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~l 102 (304)
T 3l21_A 23 MVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRL 102 (304)
T ss_dssp CCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHH
T ss_pred EECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHH
Confidence 455663 255667777763 344335555443322111111111 11122223456799999999999999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIY 219 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la 219 (436)
++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .
T Consensus 103 a~~a~~~Gadavlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~----~ 163 (304)
T 3l21_A 103 AKACAAEGAHGLLVV--TPYYS-------K----PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPI--EPDTI----R 163 (304)
T ss_dssp HHHHHHHTCSEEEEE--CCCSS-------C----CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCC--CHHHH----H
T ss_pred HHHHHHcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCC--CHHHH----H
Confidence 999999999998775 34421 1 2356678888899888899987753 345443 23333 3
Q ss_pred HHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHH
Q 013784 220 KVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 220 ~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~ 299 (436)
++++.-.+-+|--.. | ++..+.+++.. .++.| .+|+ -+.+...+..|++|+..+.+-
T Consensus 164 ~La~~pnIvgiKdss------g------------d~~~~~~~~~~-~~f~v-~~G~---d~~~l~~l~~Ga~G~is~~~n 220 (304)
T 3l21_A 164 ALASHPNIVGVXDAK------A------------DLHSGAQIMAD-TGLAY-YSGD---DALNLPWLRMGATGFISVIAH 220 (304)
T ss_dssp HHHTSTTEEEEEECS------C------------CHHHHHHHHHH-HCCEE-EESS---GGGHHHHHHHTCCEEEESTHH
T ss_pred HHhcCCCEEEEECCC------C------------CHHHHHHHhcC-CCeEE-EeCc---hHHHHHHHHcCCCEEEecHHh
Confidence 333322233332111 1 14444444432 25555 5774 133456777899999998887
Q ss_pred HhCCcchhhhhh
Q 013784 300 YQNPWYTLGHVD 311 (436)
Q Consensus 300 l~~P~lf~~~~~ 311 (436)
+. |.++.+-.+
T Consensus 221 ~~-P~~~~~l~~ 231 (304)
T 3l21_A 221 LA-AGQLRELLS 231 (304)
T ss_dssp HH-HHHHHHHHH
T ss_pred hh-HHHHHHHHH
Confidence 54 665544333
No 362
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.84 E-value=10 Score=36.35 Aligned_cols=158 Identities=10% Similarity=0.057 Sum_probs=87.0
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~-gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
+.|+ +=+...|. -.|++++++|||.|=+.- +.-. +. | |-....-..+.+...+++|...+++||.+=+.
T Consensus 14 ~~~i-~~~~a~D~----~sA~~~~~aG~~ai~vs~~~~a~--~~--G-~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d 83 (290)
T 2hjp_A 14 GRLF-TAMAAHNP----LVAKLAEQAGFGGIWGSGFELSA--SY--A-VPDANILSMSTHLEMMRAIASTVSIPLIADID 83 (290)
T ss_dssp CCCE-EEEECSSH----HHHHHHHHHTCSEEEECHHHHHH--HT--T-SCTTTCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred CCcE-EEecCCCH----HHHHHHHHcCCCEEEEChHHHHH--hC--C-CCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3443 33555565 467888889999987752 1110 00 1 12222345667778888888888999999888
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcC--CCcEEEEeCCCC
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGGIN 277 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~--~~iPVIanGgI~ 277 (436)
.|+. +.+++.+.+.++. ++|+++|.+-+... ...|.-+.....+-|.. .+-+..+++.. .+.-|++=-|-.
T Consensus 84 ~Gyg---~~~~~~~~v~~l~-~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~ 159 (290)
T 2hjp_A 84 TGFG---NAVNVHYVVPQYE-AAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEAL 159 (290)
T ss_dssp TTTS---SHHHHHHHHHHHH-HHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTT
T ss_pred CCCC---CHHHHHHHHHHHH-HhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHh
Confidence 8853 4455566555554 59999999976541 00111100011222211 12233333332 355666665544
Q ss_pred -C---HH----HHHHHHHcCCCeeee
Q 013784 278 -T---VD----EVNAALRKGAHHVMV 295 (436)
Q Consensus 278 -s---~~----da~~~l~~Gad~Vmi 295 (436)
- .+ ++.++.+.|||+|.+
T Consensus 160 ~a~~g~~~ai~Ra~ay~eAGAd~i~~ 185 (290)
T 2hjp_A 160 IAGLGQQEAVRRGQAYEEAGADAILI 185 (290)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hccccHHHHHHHHHHHHHcCCcEEEe
Confidence 1 23 333444589999987
No 363
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=89.81 E-value=7.2 Score=37.86 Aligned_cols=124 Identities=9% Similarity=0.113 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec--cCCCCCCcH
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR--IGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR--~G~~~~~~~ 211 (436)
.+++.+.+.++.+.+.||..+.+..|. .+++.-.+.+++|++.++--+.+.+. -+|+ .
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~----------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~----~ 174 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV----------------MSPEEEQAILKALLAALPPGAKLRLDANGSWD----R 174 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS----------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCC----H
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC----------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCC----H
Confidence 467777777777777899998876541 23455567788888876532333333 2342 3
Q ss_pred HHHHHHHHHHhhcC---CccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc
Q 013784 212 NQLCDFIYKVSSLS---PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK 288 (436)
Q Consensus 212 ~~~~~~la~~~e~~---Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~ 288 (436)
++..+++ +.+++. ++.+|- ..+++.+++...++.+.. ++||.+-=-+.+..++.++++.
T Consensus 175 ~~A~~~~-~~l~~~~~~~i~~iE----------------qP~~~~d~~~~~~l~~~~-~ipIa~dEs~~~~~~~~~~~~~ 236 (332)
T 2ozt_A 175 ATANRWF-AWLDRHGNGKIEYVE----------------QPLPPDQWQALLSLAQTV-TTAIALDESVVSAAEVQRWVDR 236 (332)
T ss_dssp HHHHHHH-HHHHHHCCTTEEEEE----------------CCSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHHHHHHHT
T ss_pred HHHHHHH-HHHHhhccCCcceeE----------------CCCCCCCHHHHHHHHHhC-CCCEEeCCCCCCHHHHHHHHHh
Confidence 4444443 344555 555443 112233477777777765 8999988889999999999997
Q ss_pred C-CCeeee
Q 013784 289 G-AHHVMV 295 (436)
Q Consensus 289 G-ad~Vmi 295 (436)
| +|.+++
T Consensus 237 ~a~~~i~i 244 (332)
T 2ozt_A 237 GWPGFFVI 244 (332)
T ss_dssp TCCSEEEE
T ss_pred CCCCEEEE
Confidence 6 465554
No 364
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.58 E-value=0.59 Score=46.33 Aligned_cols=59 Identities=20% Similarity=0.315 Sum_probs=44.4
Q ss_pred CCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 225 SPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 225 ~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.|++.+.+|... |. +...|+.+..+++..+++||++ |+|.+.+++.++.+.|||+|.++
T Consensus 131 ~g~~~i~i~~~~----g~--------~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 131 PQVKYICLDVAN----GY--------SEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TTCCEEEEECSC----TT--------BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred CCCCEEEEEecC----CC--------cHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 489999887421 21 1112677888877766899884 78899999999999999999775
No 365
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.51 E-value=0.58 Score=45.35 Aligned_cols=86 Identities=13% Similarity=0.056 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+.. +.+.|+|.|.+.|-|.....++.. .+.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 36 ~~~l~~lv~~-li~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A 107 (304)
T 3cpr_A 36 IAAGREVAAY-LVDKGLDSLVLAGTTGESPTTTAA-------EKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAA 107 (304)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEESSTTTTTTTSCHH-------HHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHH
Confidence 4444444443 345899999999877432222211 1233344444432 369997544434444444333
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 108 ~~~Gadavlv~~P~y~~~~ 126 (304)
T 3cpr_A 108 ASAGADGLLVVTPYYSKPS 126 (304)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 389999999998887775
No 366
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.47 E-value=7 Score=37.61 Aligned_cols=159 Identities=11% Similarity=0.111 Sum_probs=83.6
Q ss_pred CCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 123 EQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 123 ~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~-gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
.+.|+. =+...|+ -.|++++++|||.|=+.- ++-. .. | |-....-..+.+...++.|...+++||.+=+
T Consensus 17 ~~~~i~-~~~a~D~----~sA~~~~~aG~~ai~vsg~~~a~--~l--G-~pD~~~vt~~em~~~~~~I~~~~~~PviaD~ 86 (295)
T 1s2w_A 17 SKDLEF-IMEAHNG----LSARIVQEAGFKGIWGSGLSVSA--QL--G-VRDSNEASWTQVVEVLEFMSDASDVPILLDA 86 (295)
T ss_dssp SSSCEE-EEEECSH----HHHHHHHHHTCSCEEECCHHHHH--TC------------CHHHHHHHHHHHHTCSSCEEEEC
T ss_pred CCCcEE-EecCCCH----HHHHHHHHcCCCEEEeChHHHHH--hC--C-CCCCCCCCHHHHHHHHHHHHhcCCCCEEecC
Confidence 444443 3455555 467788888999887762 2211 11 1 1111123445566777778888899999999
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcc-cccCCCCCCCCCCCCcc--HHHHHHHHhcC--CCcEEEEeCCC
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKA-LLNGISPAENRTIPPLK--YEYYYALLRDF--PDLTFTLNGGI 276 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~-~~~G~~~~~~~~i~~~~--~~~v~~l~~~~--~~iPVIanGgI 276 (436)
..|+.. .+++.+.+.++. ++|+++|.+-+... ...|.-+.....+-|.. .+-+..+++.. .+.-|++=-|-
T Consensus 87 d~Gyg~---~~~v~~~v~~l~-~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda 162 (295)
T 1s2w_A 87 DTGYGN---FNNARRLVRKLE-DRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEA 162 (295)
T ss_dssp CSSCSS---HHHHHHHHHHHH-HTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECT
T ss_pred CCCCCC---HHHHHHHHHHHH-HcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH
Confidence 988642 345555555444 69999999976531 00111100011222221 22233333332 35566666555
Q ss_pred C-C-------HHHHHHHHHcCCCeeee
Q 013784 277 N-T-------VDEVNAALRKGAHHVMV 295 (436)
Q Consensus 277 ~-s-------~~da~~~l~~Gad~Vmi 295 (436)
. - .++++++.+.|||+|.+
T Consensus 163 ~~a~~g~~~ai~Ra~ay~eAGAd~i~~ 189 (295)
T 1s2w_A 163 FIAGWGLDEALKRAEAYRNAGADAILM 189 (295)
T ss_dssp TTTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HhccccHHHHHHHHHHHHHcCCCEEEE
Confidence 4 1 22333444589999998
No 367
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.38 E-value=1.1 Score=43.70 Aligned_cols=81 Identities=6% Similarity=-0.037 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH----
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL---- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l---- 286 (436)
++.+.+.+. .+.+.|+|.|.+-|-|....-++.. .+.+.+..+++...++|||+.=|=.+.+++.+..
T Consensus 28 ~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~~~Lt~~-------Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 28 DVSIDRLTD-FYAEVGCEGVTVLGILGEAPKLDAA-------EAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp HHHHHHHHH-HHHHTTCSEEEESTGGGTGGGSCHH-------HHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHCCCCEEEeCccCcChhhCCHH-------HHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 444545444 3445999999999877532222221 1234454555544579998654444555554433
Q ss_pred HcCCCeeeehHHH
Q 013784 287 RKGAHHVMVGRAA 299 (436)
Q Consensus 287 ~~Gad~VmiGRa~ 299 (436)
+.|||+||+-...
T Consensus 100 ~~Gadavlv~~P~ 112 (313)
T 3dz1_A 100 DAGAAGVMIAPPP 112 (313)
T ss_dssp HHTCSEEEECCCT
T ss_pred HcCCCEEEECCCC
Confidence 2799999997765
No 368
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.36 E-value=15 Score=34.98 Aligned_cols=145 Identities=17% Similarity=0.096 Sum_probs=89.6
Q ss_pred CCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc---CCcE
Q 013784 121 SPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT---NVPV 197 (436)
Q Consensus 121 ~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~---~iPv 197 (436)
.....|+++++.+++.++-.+.++.+++.|+|++-+- .|.-. + . ...+-+.+-.++|.+++ ++||
T Consensus 69 ~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~--~------~s~~~l~~~f~~va~a~p~~~lPi 136 (294)
T 3b4u_A 69 GIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLA--PPSYF--K--N------VSDDGLFAWFSAVFSKIGKDARDI 136 (294)
T ss_dssp TCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS--C--S------CCHHHHHHHHHHHHHHHCTTCCCE
T ss_pred hCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc--CCcCC--C--C------CCHHHHHHHHHHHHHhcCCCCCcE
Confidence 3445799999999999999999999999999998765 34421 1 0 13466778888888888 8998
Q ss_pred EEEe---ccCCCCCCcHHHHHHHHHHHh-hcCC-ccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE
Q 013784 198 SVKC---RIGVDDHDSYNQLCDFIYKVS-SLSP-TRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL 272 (436)
Q Consensus 198 svKi---R~G~~~~~~~~~~~~~la~~~-e~~G-vd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa 272 (436)
.+=- |.|.+- +.+.+ .+++ +.-. +-+|--.. | ++..+.++++..+++. +.
T Consensus 137 ilYn~P~~tg~~l--~~~~~----~~La~~~pn~ivgiKds~------g------------d~~~~~~~~~~~~~f~-v~ 191 (294)
T 3b4u_A 137 LVYNIPSVTMVTL--SVELV----GRLKAAFPGIVTGVKDSS------G------------NWSHTERLLKEHGDLA-IL 191 (294)
T ss_dssp EEEECHHHHSCCC--CHHHH----HHHHHHCTTTEEEEEECC------C------------CHHHHHHHHHHHTTSE-EE
T ss_pred EEEECcchhCcCC--CHHHH----HHHHHhCCCcEEEEEECC------C------------CHHHHHHHHHhCCCeE-EE
Confidence 7753 455443 23333 2333 2222 33333111 1 1444445544332443 45
Q ss_pred eCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcch
Q 013784 273 NGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYT 306 (436)
Q Consensus 273 nGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf 306 (436)
+|+ -+.+...+..|++|++.|.+-+ -|..+
T Consensus 192 ~G~---d~~~l~~l~~G~~G~is~~~n~-~P~~~ 221 (294)
T 3b4u_A 192 IGD---ERDLARGVRLGGQGAISGVANF-LTQEV 221 (294)
T ss_dssp ECC---HHHHHHHHHTTCCEEEESGGGT-CHHHH
T ss_pred Ecc---HHHHHHHHHCCCCEEEeCHHHh-CHHHH
Confidence 663 3445667779999999988764 45554
No 369
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=89.30 E-value=6 Score=37.32 Aligned_cols=139 Identities=10% Similarity=0.039 Sum_probs=85.6
Q ss_pred CCcEEEEE------cCCCHHH---HHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC
Q 013784 124 QHPIVLQI------GGSNLDN---LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN 194 (436)
Q Consensus 124 ~~pi~vQL------~g~~p~~---~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~ 194 (436)
+-|+.+=| |..+.++ +.+-++.+.++|+|+|-+.+--|. +. -|.+.+.+++++.. +
T Consensus 51 ~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d------g~------iD~~~~~~Li~~a~---~ 115 (256)
T 1twd_A 51 TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVD------GN------VDMPRMEKIMAAAG---P 115 (256)
T ss_dssp CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT------SS------BCHHHHHHHHHHHT---T
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCC------CC------cCHHHHHHHHHHhC---C
Confidence 34555544 3445444 455566788999999987754343 22 46778888887653 5
Q ss_pred CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 195 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 195 iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
.|++.-.. +|...+..+..+ ++.+.|++.|--||... .+ ....+.+.++++...+|-|++-|
T Consensus 116 ~~vTFHRA--fD~~~d~~~ale----~L~~lG~~rILTSG~~~------~a------~~g~~~L~~Lv~~a~~i~Im~Gg 177 (256)
T 1twd_A 116 LAVTFHRA--FDMCANPLYTLN----NLAELGIARVLTSGQKS------DA------LQGLSKIMELIAHRDAPIIMAGA 177 (256)
T ss_dssp SEEEECGG--GGGCSCHHHHHH----HHHHHTCCEEEECTTSS------ST------TTTHHHHHHHHTSSSCCEEEEES
T ss_pred CcEEEECc--hhccCCHHHHHH----HHHHcCCCEEECCCCCC------CH------HHHHHHHHHHHHhhCCcEEEecC
Confidence 77766433 333223333332 23356999998776432 11 11267777887654478889999
Q ss_pred CCCCHHHHHHHHHcCCCeeeeh
Q 013784 275 GINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~VmiG 296 (436)
||+ .+.+.+.+++|++.+=.+
T Consensus 178 Gv~-~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 178 GVR-AENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp SCC-TTTHHHHHHHTCSEEEEC
T ss_pred CcC-HHHHHHHHHcCCCeEeEC
Confidence 995 466666668898877755
No 370
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.29 E-value=0.54 Score=45.59 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+..+ .+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.-|=.+.+++.+..
T Consensus 35 ~~~l~~lv~~l-i~~Gv~gi~v~GttGE~~~Lt~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 106 (304)
T 3l21_A 35 TATAARLANHL-VDQGCDGLVVSGTTGESPTTTDGE-------KIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKAC 106 (304)
T ss_dssp HHHHHHHHHHH-HHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 44455544434 458999999998775322222211 133344444432 378998654444555555443
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+|++-...+..|.
T Consensus 107 ~~~Gadavlv~~P~y~~~s 125 (304)
T 3l21_A 107 AAEGAHGLLVVTPYYSKPP 125 (304)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 279999999988877764
No 371
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=89.14 E-value=0.53 Score=45.56 Aligned_cols=86 Identities=14% Similarity=0.205 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 32 ~~~l~~lv~~l-i~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A 103 (301)
T 1xky_A 32 FAKTTKLVNYL-IDNGTTAIVVGGTTGESPTLTSEE-------KVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKA 103 (301)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHH
Confidence 44444444433 458999999998775322222211 133344444332 3689875 45554444433322
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 104 ~~~Gadavlv~~P~y~~~s 122 (301)
T 1xky_A 104 TEVGVDAVMLVAPYYNKPS 122 (301)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 389999999998887774
No 372
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.11 E-value=3.2 Score=41.04 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=63.8
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEeccCCCC---CCcHHH--------------------------HHHHHHHHhhcCCc
Q 013784 177 LDPKFVGEAMSVIAANTNVPVSVKCRIGVDD---HDSYNQ--------------------------LCDFIYKVSSLSPT 227 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~---~~~~~~--------------------------~~~~la~~~e~~Gv 227 (436)
..++.+.+.++.+++.++.|+.|.+-..... .....+ +.+ ..+++.+.|+
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~ 123 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDA-KLAVLLDDPV 123 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHH-HHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHH-HHHHHHhcCC
Confidence 4577888888888887777877654322111 000100 111 1234456899
Q ss_pred cEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee-hH
Q 013784 228 RHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 297 (436)
Q Consensus 228 d~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi-GR 297 (436)
|.|.+|+... ..+.+..+.+. +++|+. .+.+.+++..+.+.|+|+|.+ |+
T Consensus 124 ~~V~~~~g~~----------------~~~~i~~~~~~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 124 PVVSFHFGVP----------------DREVIARLRRA--GTLTLV--TATTPEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp SEEEEESSCC----------------CHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHTTCSEEEEECT
T ss_pred CEEEEeCCCC----------------cHHHHHHHHHC--CCeEEE--ECCCHHHHHHHHHcCCCEEEEeCC
Confidence 9999986321 14556565543 778776 478999999888899999999 65
No 373
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.11 E-value=3.8 Score=37.86 Aligned_cols=118 Identities=11% Similarity=0.053 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC-----C
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD-----H 208 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~-----~ 208 (436)
++++.+.+.|+-+++.|+.+|..+ . .+-++++++.+++||.-..+..+.+ .
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~------------~------------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~ 88 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIE------------G------------IENLRTVRPHLSVPIIGIIKRDLTGSPVRIT 88 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEE------------S------------HHHHHHHGGGCCSCEEEECBCCCSSCCCCBS
T ss_pred CCcchHHHHHHHHHHCCCcEEEEC------------C------------HHHHHHHHHhcCCCEEEEEeecCCCCceEeC
Confidence 357889999999999999999762 0 2456788889999986444432211 1
Q ss_pred CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc
Q 013784 209 DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK 288 (436)
Q Consensus 209 ~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~ 288 (436)
.+.+++.+ +.++|+|.|.+-... ...+ ..-.+++..+ ++. ++++++ ++.+.+++.++.+.
T Consensus 89 ~~~~~i~~-----~~~aGad~I~l~~~~----~~~p-------~~l~~~i~~~-~~~-g~~v~~--~v~t~eea~~a~~~ 148 (229)
T 3q58_A 89 PYLQDVDA-----LAQAGADIIAFDASF----RSRP-------VDIDSLLTRI-RLH-GLLAMA--DCSTVNEGISCHQK 148 (229)
T ss_dssp CSHHHHHH-----HHHHTCSEEEEECCS----SCCS-------SCHHHHHHHH-HHT-TCEEEE--ECSSHHHHHHHHHT
T ss_pred ccHHHHHH-----HHHcCCCEEEECccc----cCCh-------HHHHHHHHHH-HHC-CCEEEE--ecCCHHHHHHHHhC
Confidence 23333322 235899999875421 1111 0113344444 333 677665 78999999999999
Q ss_pred CCCeeee
Q 013784 289 GAHHVMV 295 (436)
Q Consensus 289 Gad~Vmi 295 (436)
|+|.|.+
T Consensus 149 Gad~Ig~ 155 (229)
T 3q58_A 149 GIEFIGT 155 (229)
T ss_dssp TCSEEEC
T ss_pred CCCEEEe
Confidence 9999964
No 374
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.05 E-value=18 Score=35.28 Aligned_cols=152 Identities=15% Similarity=0.049 Sum_probs=91.8
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++.+.+++.++..+.++.++++|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+=-
T Consensus 101 ~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~Y~--~---------~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 101 RGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLA--PVSYT--P---------LTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp TTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 456799999999999999999999999999998665 44421 1 2346677888888888899987643
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGIN 277 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~ 277 (436)
|.|.+- +.+.+ .++++.-.+-+|--.. |.. ...+..+.++++..+ ++ .+.+|+
T Consensus 168 ~P~~tg~~l--~~e~~----~~La~~pnIvgiKdss------gd~--------~~~~~~~~~l~~~~~~~f-~v~~G~-- 224 (332)
T 2r8w_A 168 NPTTTRFTF--SDELL----VRLAYIPNIRAIKMPL------PAD--------ADYAGELARLRPKLSDDF-AIGYSG-- 224 (332)
T ss_dssp CHHHHCCCC--CHHHH----HHHHTSTTEEEEEECC------CTT--------CCHHHHHHHHTTTSCTTC-EEEECC--
T ss_pred CccccCcCC--CHHHH----HHHHcCCCEEEEEeCC------CCc--------hhHHHHHHHHHHhcCCCE-EEEeCc--
Confidence 345432 23333 3333322233333211 100 000344445554432 33 355663
Q ss_pred CHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 278 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 278 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
-+.+...+..|++|++.|.+-+ -|.++.+..+
T Consensus 225 -D~~~l~~l~~G~~G~is~~anv-~P~~~~~l~~ 256 (332)
T 2r8w_A 225 -DWGCTDATLAGGDTWYSVVAGL-LPVPALQLMR 256 (332)
T ss_dssp -HHHHHHHHHTTCSEEEESGGGT-CHHHHHHHHH
T ss_pred -hHHHHHHHHCCCCEEEeCHHHh-CHHHHHHHHH
Confidence 3456667779999999998764 4665444333
No 375
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=89.01 E-value=9.6 Score=37.50 Aligned_cols=122 Identities=11% Similarity=0.011 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCcHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSYN 212 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~~ 212 (436)
+++++.+.++.+.+.||..+-+..|. +++.-.+.+++++++++ +.+.+-..-+|+ .+
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~-----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~----~~ 202 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR-----------------EPEKDPERVRAAREAIGESVELMVDANGAYT----RK 202 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSC----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC-----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC----HH
Confidence 45667777776667899999876442 23334566677777654 445444444453 34
Q ss_pred HHHHHHHHHhhcC-CccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHHHcCC
Q 013784 213 QLCDFIYKVSSLS-PTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGA 290 (436)
Q Consensus 213 ~~~~~la~~~e~~-Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~-iPVIanGgI~s~~da~~~l~~Ga 290 (436)
+..+++ +.+++. ++.+|- . .+++-+++...++.+.... +||.+.=-+.+..++.++ ...+
T Consensus 203 ~a~~~~-~~l~~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~~a~ 264 (372)
T 3cyj_A 203 QALYWA-GAFAREAGISYLE----E------------PVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-AGCV 264 (372)
T ss_dssp HHHHHH-HHHHHHHCCCEEE----C------------SSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-HTTC
T ss_pred HHHHHH-HHHHhhcCCcEEE----C------------CCCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-hCCC
Confidence 444543 345667 777665 1 1222347777777776532 899998889999999988 7668
Q ss_pred Ceeee
Q 013784 291 HHVMV 295 (436)
Q Consensus 291 d~Vmi 295 (436)
|.|++
T Consensus 265 d~i~i 269 (372)
T 3cyj_A 265 DILQA 269 (372)
T ss_dssp SEEEE
T ss_pred CEEec
Confidence 88885
No 376
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.96 E-value=0.58 Score=45.33 Aligned_cols=86 Identities=12% Similarity=-0.001 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 31 ~~~l~~lv~~l-i~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A 102 (303)
T 2wkj_A 31 KASLRRLVQFN-IQQGIDGLYVGGSTGEAFVQSLSE-------REQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASA 102 (303)
T ss_dssp HHHHHHHHHHH-HHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECeeccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 44444544433 458999999998775322232211 233344444332 3799985 45554444433332
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 103 ~~~Gadavlv~~P~y~~~s 121 (303)
T 2wkj_A 103 KRYGFDAVSAVTPFYYPFS 121 (303)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhCCCCEEEecCCCCCCCC
Confidence 379999999988887774
No 377
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.85 E-value=0.57 Score=45.25 Aligned_cols=86 Identities=20% Similarity=0.170 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+. .+.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 27 ~~~l~~lv~-~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 98 (297)
T 3flu_A 27 YEQLRDLID-WHIENGTDGIVAVGTTGESATLSVEE-------HTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAA 98 (297)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEeCccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHH
Confidence 444444444 34469999999998775322222211 133344444432 368988654444555544433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 99 ~~~Gadavlv~~P~y~~~~ 117 (297)
T 3flu_A 99 EKAGADYTLSVVPYYNKPS 117 (297)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 389999999988887775
No 378
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=88.85 E-value=1.4 Score=42.15 Aligned_cols=141 Identities=12% Similarity=0.107 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHCCCCEEE-ecC------C---CCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCC
Q 013784 136 LDNLAKATELANAYNYDEIN-LNC------G---CPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGV 205 (436)
Q Consensus 136 p~~~~~aA~~~~~~G~d~Id-LN~------g---cP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~ 205 (436)
.+.+....++.++.|...+. +.- - ++.- .+|+..+.+.+++.++ ..++.||.+|.-...
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~~d~~------kIga~~~~n~~ll~~~-----a~~~kPV~lk~G~~~ 140 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVCDVI------QLPAFLARQTDLVVAM-----AKTGNVVNIKKPQFL 140 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHCSEE------EECGGGTTBHHHHHHH-----HHTCCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhhCCEE------EECcccccCHHHHHHH-----HcCCCcEEEECCCCC
Confidence 45555555666677766433 210 0 2322 3588888888866554 246899999977632
Q ss_pred CCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe-----------C
Q 013784 206 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-----------G 274 (436)
Q Consensus 206 ~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan-----------G 274 (436)
+ .+ ++...+ ..+...|...+++.=|...+ +. ++ ..+++..+..+.+.++++||+.. |
T Consensus 141 t-~~---e~~~A~-~~i~~~Gn~~i~L~~rg~~~-~~---~~---~~~dl~~i~~lk~~~~~~pV~~D~sH~~q~~~~~~ 208 (280)
T 2qkf_A 141 S-PS---QMKNIV-EKFHEAGNGKLILCERGSSF-GY---DN---LVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGS 208 (280)
T ss_dssp C-GG---GHHHHH-HHHHHTTCCCEEEEECCEEC-ST---TC---EECCTTHHHHHHHHTTTCCEEEEHHHHCC------
T ss_pred C-HH---HHHHHH-HHHHHcCCCeEEEEECCCCC-CC---Cc---cccCHHHHHHHHHhCCCCCEEEECCCCccccCccc
Confidence 2 22 333322 23456887666554343322 11 10 11235566667666557899983 2
Q ss_pred CCCCH------HHHHHHHHcCCCeeeehHHH
Q 013784 275 GINTV------DEVNAALRKGAHHVMVGRAA 299 (436)
Q Consensus 275 gI~s~------~da~~~l~~Gad~VmiGRa~ 299 (436)
+-... .-+.++...||||+||=+=+
T Consensus 209 ~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 209 AASGGRRAQALDLALAGMATRLAGLFLESHP 239 (280)
T ss_dssp ----CHHHHHHHHHHHHHTTCCSEEEEEC--
T ss_pred cccCCchhhHHHHHHHHHHcCCCEEEEeecC
Confidence 22222 23344556899999987643
No 379
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=88.78 E-value=11 Score=37.42 Aligned_cols=130 Identities=14% Similarity=0.174 Sum_probs=83.6
Q ss_pred CcEEEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEec
Q 013784 125 HPIVLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCR 202 (436)
Q Consensus 125 ~pi~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR 202 (436)
-|+...+...+ ++.+++.++.+.+.||..+-+..| | . .+.+ .+++||+.+ ++.+.+=.-
T Consensus 138 v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~--------~------~d~~----~v~avR~~~~~~~l~vDaN 198 (388)
T 3qld_A 138 VEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P--------G------RDRA----AIKAVRLRYPDLAIAADAN 198 (388)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T--------T------BSHH----HHHHHHHHCTTSEEEEECT
T ss_pred EEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c--------H------HHHH----HHHHHHHHCCCCeEEEECC
Confidence 45556666555 999998888888889999988754 1 0 3333 455555554 344444444
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEV 282 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da 282 (436)
-+|+. .++ .. .+.+++.++.+|- . .+++.+++...++.+.. ++||.+.=.+.+..++
T Consensus 199 ~~~~~-~~A---~~--~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~ 255 (388)
T 3qld_A 199 GSYRP-EDA---PV--LRQLDAYDLQFIE----Q------------PLPEDDWFDLAKLQASL-RTPVCLDESVRSVREL 255 (388)
T ss_dssp TCCCG-GGH---HH--HHHGGGGCCSCEE----C------------CSCTTCHHHHHHHHHHC-SSCEEESTTCCSHHHH
T ss_pred CCCCh-HHH---HH--HHHHhhCCCcEEE----C------------CCCcccHHHHHHHHHhC-CCCEEeCCCCCCHHHH
Confidence 45653 222 22 3456667766554 1 12333466677777765 8999988889999999
Q ss_pred HHHHHc-CCCeeeeh
Q 013784 283 NAALRK-GAHHVMVG 296 (436)
Q Consensus 283 ~~~l~~-Gad~VmiG 296 (436)
.++++. .+|.|++=
T Consensus 256 ~~~~~~~a~d~v~~k 270 (388)
T 3qld_A 256 KLTARLGAARVLNVK 270 (388)
T ss_dssp HHHHHHTCCSEEEEC
T ss_pred HHHHHcCCCCEEEEC
Confidence 999985 47888753
No 380
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.73 E-value=0.57 Score=45.32 Aligned_cols=86 Identities=9% Similarity=0.046 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-C-CcEEEEeCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-P-DLTFTLNGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~-~iPVIanGgI~s~~da~~~l-- 286 (436)
.+.+.+.+. .+.+.|++.|.+.|-|.....++.. .+.+.+..+++.. . ++|||+.=|=.+.+++.+..
T Consensus 27 ~~~l~~lv~-~li~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~ 98 (301)
T 3m5v_A 27 EQSYARLIK-RQIENGIDAVVPVGTTGESATLTHE-------EHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKF 98 (301)
T ss_dssp HHHHHHHHH-HHHHTTCCEEECSSTTTTGGGSCHH-------HHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHH
Confidence 444444443 3346999999998877432222221 1233444444433 3 58998654444555554433
Q ss_pred --HcCCCeeeehHHHHhCCc
Q 013784 287 --RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 --~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 99 a~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 99 AKEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HHHTTCSEEEEECCCSSCCC
T ss_pred HHHcCCCEEEEcCCCCCCCC
Confidence 389999999998888775
No 381
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=88.70 E-value=0.66 Score=44.71 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+. .+.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 20 ~~~l~~lv~-~li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A 91 (294)
T 2ehh_A 20 YEALGNLIE-FHVDNGTDAILVCGTTGESPTLTFEE-------HEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHA 91 (294)
T ss_dssp HHHHHHHHH-HHHTTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHCCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 334444333 34468999999998775322222211 233444444432 268997544434444444333
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 92 ~~~Gadavlv~~P~y~~~s 110 (294)
T 2ehh_A 92 KEVGADGALVVVPYYNKPT 110 (294)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 389999999988887774
No 382
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.66 E-value=0.63 Score=44.72 Aligned_cols=86 Identities=13% Similarity=0.107 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
.+.+.+.+..+ .+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 20 ~~~l~~lv~~l-i~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a 91 (289)
T 2yxg_A 20 FDGLEENINFL-IENGVSGIVAVGTTGESPTLSHEE-------HKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFA 91 (289)
T ss_dssp HHHHHHHHHHH-HHTTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHCCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 33444443333 458999999988775322222211 233444444432 2699975 45554444333222
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 92 ~~~Gadavlv~~P~y~~~s 110 (289)
T 2yxg_A 92 EDVGADAVLSITPYYNKPT 110 (289)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 379999999988887774
No 383
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.58 E-value=0.6 Score=44.93 Aligned_cols=86 Identities=15% Similarity=0.165 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+.. +.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 21 ~~~l~~lv~~-li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a 92 (291)
T 3a5f_A 21 FDKLSELIEW-HIKSKTDAIIVCGTTGEATTMTETE-------RKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWA 92 (291)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHH
Confidence 3344444333 3458999999998775332232211 133344444332 268987544444444444333
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 93 ~~~Gadavlv~~P~y~~~s 111 (291)
T 3a5f_A 93 ESIGVDGLLVITPYYNKTT 111 (291)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 379999999988887764
No 384
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.56 E-value=0.57 Score=45.10 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+. .+.+.|++.|.+-|-|.....++..+ +.+.+..+++.. .++|||+.-|-.+.+++.+..
T Consensus 22 ~~~l~~lv~-~li~~Gv~gl~v~GttGE~~~Lt~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 93 (292)
T 3daq_A 22 LEALKAHVN-FLLENNAQAIIVNGTTAESPTLTTDE-------KELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHH
Confidence 334444433 34469999999998775322222211 133344444432 368998765555555555443
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 94 ~~~Gadavlv~~P~y~~~~ 112 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTN 112 (292)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 279999999988887774
No 385
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.42 E-value=0.5 Score=46.11 Aligned_cols=86 Identities=13% Similarity=0.159 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+.. +.+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.-|=.+.+++.+..
T Consensus 43 ~~~l~~lv~~-li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A 114 (314)
T 3qze_A 43 WDSLAKLVDF-HLQEGTNAIVAVGTTGESATLDVEE-------HIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAA 114 (314)
T ss_dssp HHHHHHHHHH-HHHHTCCEEEESSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHH
Confidence 4444444443 3458999999998775322232211 133343344332 368988654444555554433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 115 ~~~Gadavlv~~P~y~~~s 133 (314)
T 3qze_A 115 KSGGADACLLVTPYYNKPT 133 (314)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEEcCCCCCCCC
Confidence 389999999998887775
No 386
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.35 E-value=0.66 Score=44.74 Aligned_cols=86 Identities=5% Similarity=-0.026 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEE-EeCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFT-LNGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVI-anGgI~s~~da~~~l-- 286 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++.. .+.+.+..+++... ++||| +.|+..+.+.++.+.
T Consensus 23 ~~~l~~lv~~l-i~~Gv~gl~~~GttGE~~~Ls~~-------Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A 94 (294)
T 3b4u_A 23 IDAMIAHARRC-LSNGCDSVTLFGTTGEGCSVGSR-------ERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEA 94 (294)
T ss_dssp HHHHHHHHHHH-HHTTCSEEEESSTTTTGGGSCHH-------HHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHH
Confidence 44444444433 45899999999877532222221 12344444454432 58887 556554444433332
Q ss_pred -HcCCCeeeehHHHHhC-Cc
Q 013784 287 -RKGAHHVMVGRAAYQN-PW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~-P~ 304 (436)
+.|||+||+-...+.. |.
T Consensus 95 ~~~Gadavlv~~P~y~~~~s 114 (294)
T 3b4u_A 95 LNAGARNILLAPPSYFKNVS 114 (294)
T ss_dssp HHTTCSEEEECCCCSSCSCC
T ss_pred HhcCCCEEEEcCCcCCCCCC
Confidence 3899999999888776 53
No 387
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=88.20 E-value=19 Score=34.51 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=107.6
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+....++.++. ..|-.|+++.+...--..+...++ ++...+......|+++.+.+++.++..+.++.++++|+|
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 55566777763 344335555443221111111111 111222233567999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
++-+- .|.-. + ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++++.-.+-+
T Consensus 110 avlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~~pnIvg 170 (301)
T 1xky_A 110 AVMLV--APYYN--K---------PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQI--SVDTV----VRLSEIENIVA 170 (301)
T ss_dssp EEEEE--CCCSS--C---------CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCC--CHHHH----HHHHTSTTEEE
T ss_pred EEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCC--CHHHH----HHHHcCCCEEE
Confidence 98765 34321 1 2346678888888888899987743 445443 23333 33333222333
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
|--.. | ++..+.++++..+ ++. +.+|+= +.+...+..|++|+..+.+-+ -|.++.+
T Consensus 171 iKdss------g------------d~~~~~~~~~~~~~~f~-v~~G~d---~~~l~~l~~G~~G~is~~an~-~P~~~~~ 227 (301)
T 1xky_A 171 IKDAG------G------------DVLTMTEIIEKTADDFA-VYSGDD---GLTLPAMAVGAKGIVSVASHV-IGNEMQE 227 (301)
T ss_dssp EEECS------S------------CHHHHHHHHHHSCTTCE-EEESSG---GGHHHHHHTTCCEEEESTHHH-HHHHHHH
T ss_pred EEcCC------C------------CHHHHHHHHHhcCCCeE-EEECcH---HHHHHHHHcCCCEEEcCHHHh-CHHHHHH
Confidence 32211 1 1445555555443 444 466742 335566778999999998875 4555433
No 388
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.16 E-value=0.64 Score=45.12 Aligned_cols=86 Identities=13% Similarity=0.125 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
.+.+.+.+.. +.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 32 ~~~l~~lv~~-li~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A 103 (306)
T 1o5k_A 32 LESYERLVRY-QLENGVNALIVLGTTGESPTVNEDE-------REKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQA 103 (306)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEESSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEeCccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHH
Confidence 3344444333 3458999999998775332232211 133344444332 3689875 45554444333322
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 104 ~~~Gadavlv~~P~y~~~s 122 (306)
T 1o5k_A 104 EKLGANGVLVVTPYYNKPT 122 (306)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 379999999988887774
No 389
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.12 E-value=1.5 Score=42.47 Aligned_cols=78 Identities=18% Similarity=0.293 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHH-
Q 013784 210 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALR- 287 (436)
Q Consensus 210 ~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~- 287 (436)
+.+.+.+.+..+++ .|+|.|.+.|-|....-++..+. .+.+..+++... ++|||+.-|=.+.+++.+..+
T Consensus 33 D~~~l~~lv~~li~-~Gv~Gl~v~GtTGE~~~Ls~~Er-------~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~ 104 (307)
T 3s5o_A 33 DYGKLEENLHKLGT-FPFRGFVVQGSNGEFPFLTSSER-------LEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVS 104 (307)
T ss_dssp CHHHHHHHHHHHTT-SCCSEEEESSGGGTGGGSCHHHH-------HHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEECccccchhhCCHHHH-------HHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHH
Q ss_pred ---cCCCeeee
Q 013784 288 ---KGAHHVMV 295 (436)
Q Consensus 288 ---~Gad~Vmi 295 (436)
.|||+||+
T Consensus 105 A~~~Gadavlv 115 (307)
T 3s5o_A 105 MAQVGADAAMV 115 (307)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCCEEEE
No 390
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=87.97 E-value=3.1 Score=41.26 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=35.1
Q ss_pred cHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 254 KYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 254 ~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.|+.+..+++.. ++||+. +++.+++++..+.+.|+|+|.++
T Consensus 213 ~~~~i~~l~~~~-~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 213 SWKDVAWLQTIT-SLPILV-KGVITAEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp CHHHHHHHHHHC-CSCEEE-ECCCSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHh-CCCEEE-EecCCHHHHHHHHHcCCCEEEEC
Confidence 477788887776 899985 77899999999999999999984
No 391
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=87.96 E-value=8.4 Score=36.92 Aligned_cols=125 Identities=14% Similarity=0.153 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHH
Q 013784 137 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCD 216 (436)
Q Consensus 137 ~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~ 216 (436)
+.+.+-++.+.++|+|+|-+.+--|.. . -|.+.+.+++++.. +++++.-... |...+..+..+
T Consensus 111 ~~M~~dI~~~~~~GAdGvVfG~L~~dg------~------iD~~~~~~Li~~a~---~l~vTFHRAF--D~~~d~~~Ale 173 (287)
T 3iwp_A 111 EVMKADIRLAKLYGADGLVFGALTEDG------H------IDKELCMSLMAICR---PLPVTFHRAF--DMVHDPMAALE 173 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCBCTTS------C------BCHHHHHHHHHHHT---TSCEEECGGG--GGCSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeCCCC------C------cCHHHHHHHHHHcC---CCcEEEECch--hccCCHHHHHH
Confidence 445556677889999998776533332 2 46777888887653 4677664332 32222333333
Q ss_pred HHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHH-cCCCeee
Q 013784 217 FIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR-KGAHHVM 294 (436)
Q Consensus 217 ~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~-~Gad~Vm 294 (436)
.+ .+.|++.|-.+|-.. .+ ....+.+.++++.. .+|+|++-||| +.+.+.+.++ +|++.+=
T Consensus 174 ---~L-i~lGvdrILTSG~~~------~a------~~Gl~~Lk~Lv~~a~~rI~ImaGGGV-~~~Ni~~l~~~tG~~~~H 236 (287)
T 3iwp_A 174 ---TL-LTLGFERVLTSGCDS------SA------LEGLPLIKRLIEQAKGRIVVMPGGGI-TDRNLQRILEGSGATEFH 236 (287)
T ss_dssp ---HH-HHHTCSEEEECTTSS------ST------TTTHHHHHHHHHHHTTSSEEEECTTC-CTTTHHHHHHHHCCSEEE
T ss_pred ---HH-HHcCCCEEECCCCCC------Ch------HHhHHHHHHHHHHhCCCCEEEECCCc-CHHHHHHHHHhhCCCEEe
Confidence 22 346999998876421 01 12367777776643 36999999999 5688888887 8988765
Q ss_pred e
Q 013784 295 V 295 (436)
Q Consensus 295 i 295 (436)
.
T Consensus 237 ~ 237 (287)
T 3iwp_A 237 C 237 (287)
T ss_dssp E
T ss_pred E
Confidence 4
No 392
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=87.96 E-value=5.2 Score=35.78 Aligned_cols=125 Identities=13% Similarity=0.036 Sum_probs=69.9
Q ss_pred EEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cCCcEEE--EeccCC
Q 013784 129 LQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSV--KCRIGV 205 (436)
Q Consensus 129 vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~iPvsv--KiR~G~ 205 (436)
+-+--.+.+...+.++.+. .|+|.|++.. |... .+| .++++.+++. .++||.+ |+..+
T Consensus 5 ~a~D~~~~~~~~~~~~~~~-~~~diie~G~--p~~~-----~~g----------~~~i~~ir~~~~~~~i~~~~~~~~~- 65 (211)
T 3f4w_A 5 LALDELTLPEAMVFMDKVV-DDVDIIEVGT--PFLI-----REG----------VNAIKAIKEKYPHKEVLADAKIMDG- 65 (211)
T ss_dssp EEECSCCHHHHHHHHHHHG-GGCSEEEECH--HHHH-----HHT----------THHHHHHHHHCTTSEEEEEEEECSC-
T ss_pred EEeCCCCHHHHHHHHHHhh-cCccEEEeCc--HHHH-----hcc----------HHHHHHHHHhCCCCEEEEEEEeccc-
Confidence 3333345666666666554 4789998876 4421 113 2567777776 4788743 33321
Q ss_pred CCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe-CCCCCH-HHHH
Q 013784 206 DDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN-GGINTV-DEVN 283 (436)
Q Consensus 206 ~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan-GgI~s~-~da~ 283 (436)
.... .+.+.++|+|.|++|+... ......+.+..++. +++++.. =...++ +.+.
T Consensus 66 -----~~~~----~~~~~~~Gad~v~v~~~~~--------------~~~~~~~~~~~~~~-g~~~~v~~~~~~t~~~~~~ 121 (211)
T 3f4w_A 66 -----GHFE----SQLLFDAGADYVTVLGVTD--------------VLTIQSCIRAAKEA-GKQVVVDMICVDDLPARVR 121 (211)
T ss_dssp -----HHHH----HHHHHHTTCSEEEEETTSC--------------HHHHHHHHHHHHHH-TCEEEEECTTCSSHHHHHH
T ss_pred -----hHHH----HHHHHhcCCCEEEEeCCCC--------------hhHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHH
Confidence 1111 2233469999999996421 00122233333443 5666542 345565 5577
Q ss_pred HHHHcCCCeeeeh
Q 013784 284 AALRKGAHHVMVG 296 (436)
Q Consensus 284 ~~l~~Gad~VmiG 296 (436)
.+.+.|+|.|.+.
T Consensus 122 ~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 122 LLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHTCCEEEEE
T ss_pred HHHHcCCCEEEEc
Confidence 7778999998764
No 393
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=87.96 E-value=2.6 Score=40.52 Aligned_cols=110 Identities=12% Similarity=0.113 Sum_probs=62.7
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCC
Q 013784 171 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 250 (436)
Q Consensus 171 yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i 250 (436)
.|+..+.+.+++.++- .++.||.+|.-...+. ++....+ . .+.+.|.+.|++-=|...+ +. ++
T Consensus 116 IgA~~~~n~~LLr~va-----~~gkPVilK~G~~~t~-~ei~~av---e-~i~~~Gn~~i~L~erg~~y-~~---~~--- 178 (285)
T 3sz8_A 116 VPAFLARQTDLVVAIA-----KAGKPVNVKKPQFMSP-TQLKHVV---S-KCGEVGNDRVMLCERGSSF-GY---DN--- 178 (285)
T ss_dssp ECGGGTTCHHHHHHHH-----HTSSCEEEECCTTSCG-GGTHHHH---H-HHHHTTCCCEEEEECCEEC-SS---SC---
T ss_pred ECccccCCHHHHHHHH-----ccCCcEEEeCCCCCCH-HHHHHHH---H-HHHHcCCCcEEEEeCCCCC-CC---Cc---
Confidence 4777778888665533 3589999997764221 2232322 2 3345788777764333322 11 11
Q ss_pred CCccHHHHHHHHhcCCCcEEEEeC---------------CCCC--HHHHHHHHHcCCCeeeehH
Q 013784 251 PPLKYEYYYALLRDFPDLTFTLNG---------------GINT--VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 251 ~~~~~~~v~~l~~~~~~iPVIanG---------------gI~s--~~da~~~l~~Gad~VmiGR 297 (436)
..+++..+..+++.+.++||+... |-++ ..-+.++...||||++|=+
T Consensus 179 ~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~ 242 (285)
T 3sz8_A 179 LVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEA 242 (285)
T ss_dssp EECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEE
T ss_pred CccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEe
Confidence 113456666777666459999842 2211 2345567779999998754
No 394
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=87.90 E-value=0.57 Score=45.24 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
.+.+.+.+. .+.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 20 ~~~l~~lv~-~li~~Gv~gi~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A 91 (297)
T 2rfg_A 20 EKALAGLVD-WQIKHGAHGLVPVGTTGESPTLTEEE-------HKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHA 91 (297)
T ss_dssp HHHHHHHHH-HHHHTTCSEEECSSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHH
Confidence 334444433 33458999999988775332232211 133344444332 2688874 45554444333322
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 92 ~~~Gadavlv~~P~y~~~s 110 (297)
T 2rfg_A 92 QQAGADAVLCVAGYYNRPS 110 (297)
T ss_dssp HHHTCSEEEECCCTTTCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 379999999998887774
No 395
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=87.70 E-value=7 Score=36.72 Aligned_cols=82 Identities=11% Similarity=0.120 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCC-----CcHH
Q 013784 138 NLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH-----DSYN 212 (436)
Q Consensus 138 ~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~-----~~~~ 212 (436)
.+.+..+.+.+.|||.|||+-|+=.- ..+.-.++++.+++. | +.|+.-.|..+. .+..
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l--------------~~~~~~~~I~~~~~~-G--~~v~~EvG~k~~~~~~~~~~~ 148 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDI--------------SLEERNNAIKRAKDN-G--FMVLTEVGKKMPDKDKQLTID 148 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCC--------------CHHHHHHHHHHHHHT-T--CEEEEEECCSSHHHHTTCCHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccC--------------CHHHHHHHHHHHHHC-C--CEEeeeccccCCcccCCCCHH
Confidence 34455667788999999999775432 233445555555443 2 444555566543 2455
Q ss_pred HHHHHHHHHhhcCCccEEEEccCcc
Q 013784 213 QLCDFIYKVSSLSPTRHFIIHSRKA 237 (436)
Q Consensus 213 ~~~~~la~~~e~~Gvd~I~vhgrt~ 237 (436)
++.+.+.+-++ +|++.|++-+|+.
T Consensus 149 ~~I~~~~~~Le-AGA~~ViiEarEs 172 (251)
T 1qwg_A 149 DRIKLINFDLD-AGADYVIIEGRES 172 (251)
T ss_dssp HHHHHHHHHHH-HTCSEEEECCTTT
T ss_pred HHHHHHHHHHH-CCCcEEEEeeecc
Confidence 66666665665 8999999999985
No 396
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.68 E-value=0.55 Score=45.83 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+. .+.+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 42 ~~~l~~li~-~li~~Gv~Gl~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A 113 (315)
T 3si9_A 42 EKAFCNFVE-WQITQGINGVSPVGTTGESPTLTHEE-------HKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHA 113 (315)
T ss_dssp HHHHHHHHH-HHHHTTCSEEECSSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEeCccccCccccCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 444555444 34469999999988774322222211 133344444432 368988654444555554433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 114 ~~~Gadavlv~~P~y~~~~ 132 (315)
T 3si9_A 114 EKAGADAVLVVTPYYNRPN 132 (315)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 389999999988887774
No 397
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=87.66 E-value=0.6 Score=44.96 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH-H-
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL-R- 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l-~- 287 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+.. .
T Consensus 21 ~~~l~~lv~~l-i~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a 92 (292)
T 2ojp_A 21 RASLKKLIDYH-VASGTSAIVSVGTTGESATLNHDE-------HADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRF 92 (292)
T ss_dssp HHHHHHHHHHH-HHHTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccchhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHH
Confidence 44444444434 457999999998775322222211 233344444332 268987544444444444433 2
Q ss_pred --cCCCeeeehHHHHhCCc
Q 013784 288 --KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 288 --~Gad~VmiGRa~l~~P~ 304 (436)
.|||+||+-...+..|.
T Consensus 93 ~~~Gadavlv~~P~y~~~s 111 (292)
T 2ojp_A 93 NDSGIVGCLTVTPYYNRPS 111 (292)
T ss_dssp TTSSCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 79999999988887774
No 398
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=87.58 E-value=9.6 Score=37.77 Aligned_cols=128 Identities=17% Similarity=0.254 Sum_probs=80.8
Q ss_pred cEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 126 PIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
|+...+. +.+++.+.+.++.+.+.||..+-+..| | . .+.+. +++|++.+ ++.+.+-..-
T Consensus 151 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~--------~------~d~~~----v~avr~a~~~~~l~vDaN~ 211 (386)
T 1wue_A 151 PVGISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-P--------G------YDVEP----VALIRQHFPNLPLMVDANS 211 (386)
T ss_dssp ECCEEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-T--------T------BSHHH----HHHHHHHCTTSCEEEECTT
T ss_pred EeeEEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-c--------H------HHHHH----HHHHHHhCCCCeEEEeCCC
Confidence 3333343 346888888777777789999887654 1 1 23333 55555544 3445555455
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+|+. + +. ++ .+.+++.++.+|- . .+++.+++...++.+.. ++||.+.=-+.+..++.
T Consensus 212 ~~~~-~---~a-~~-~~~l~~~~i~~iE----q------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~ 268 (386)
T 1wue_A 212 AYTL-A---DL-PQ-LQRLDHYQLAMIE----Q------------PFAADDFLDHAQLQREL-KTRICLDENIRSLKDCQ 268 (386)
T ss_dssp CCCG-G---GH-HH-HHGGGGSCCSCEE----C------------CSCTTCSHHHHHHHTTC-SSCEEECTTCCSHHHHH
T ss_pred CCCH-H---HH-HH-HHHHHhCCCeEEe----C------------CCCcccHHHHHHHHHhc-CCCEEeCCccCCHHHHH
Confidence 5643 2 23 33 4566777777665 1 12222366666776664 89999988899999999
Q ss_pred HHHHc-CCCeeee
Q 013784 284 AALRK-GAHHVMV 295 (436)
Q Consensus 284 ~~l~~-Gad~Vmi 295 (436)
++++. .+|.|++
T Consensus 269 ~~i~~~a~d~i~i 281 (386)
T 1wue_A 269 VALALGSCRSINL 281 (386)
T ss_dssp HHHHHTCCSEEEE
T ss_pred HHHHcCCCCEEEE
Confidence 99984 4788875
No 399
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=87.55 E-value=20 Score=34.10 Aligned_cols=191 Identities=12% Similarity=0.076 Sum_probs=106.8
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+....++.++. ..|-.|+++.+...--......++ ++...+......|+++++.+++.++..+.++.+++.|+|
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 45556766653 345345555443221111111111 112222233467999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
++-+- .|.-. + ...+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++++ . ..
T Consensus 99 avlv~--~P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~-~--pn 156 (292)
T 2ojp_A 99 GCLTV--TPYYN--R---------PSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDL--LPETV----GRLAK-V--KN 156 (292)
T ss_dssp EEEEE--CCCSS--C---------CCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCC--CHHHH----HHHHT-S--TT
T ss_pred EEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCC--CHHHH----HHHHc-C--CC
Confidence 98665 34421 1 2346678888888888899987643 445433 23333 33333 2 22
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
|+ |-. -.++ ++..+.++++..+ ++. +.+|+= +.+...+..|++|++.|.+-+ -|..+.+
T Consensus 157 iv--giK----~s~g---------d~~~~~~~~~~~~~~f~-v~~G~d---~~~~~~l~~G~~G~is~~~n~-~P~~~~~ 216 (292)
T 2ojp_A 157 II--GIX----EATG---------NLTRVNQIKELVSDDFV-LLSGDD---ASALDFMQYGGHGVISVTANV-AARDMAQ 216 (292)
T ss_dssp EE--EC-----CCSC---------CTHHHHHHHTTSCTTSB-CEESCG---GGHHHHHHTTCCEEEESGGGT-CHHHHHH
T ss_pred EE--EEe----CCCC---------CHHHHHHHHHhcCCCEE-EEECcH---HHHHHHHHCCCcEEEeCHHHh-hHHHHHH
Confidence 22 111 0010 1344556655432 343 356641 334566778999999998775 4666544
Q ss_pred hhh
Q 013784 309 HVD 311 (436)
Q Consensus 309 ~~~ 311 (436)
-.+
T Consensus 217 l~~ 219 (292)
T 2ojp_A 217 MCK 219 (292)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 400
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=87.48 E-value=0.92 Score=42.16 Aligned_cols=75 Identities=21% Similarity=0.275 Sum_probs=51.5
Q ss_pred cCCccEEEEccCcccccCCC----CCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 224 LSPTRHFIIHSRKALLNGIS----PAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 224 ~~Gvd~I~vhgrt~~~~G~~----~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
..+.+.|.+-.|... |.+ .+. +-..+.+.++++.. .+++|+.-|||.+..++..+...|+||+.||++
T Consensus 132 ~~~~~iIayep~wai--GtG~~v~t~~-----~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a 204 (226)
T 1w0m_A 132 ALGPHAVAVEPPELI--GTGRAVSRYK-----PEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASA 204 (226)
T ss_dssp HTCCSEEEECCGGGT--TTSCCHHHHC-----HHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cCCCCEEEEcChhhh--ccCCCCCCCC-----hhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHH
Confidence 456677777666542 432 111 10022233444433 368999999999999999999999999999999
Q ss_pred HHhCCcc
Q 013784 299 AYQNPWY 305 (436)
Q Consensus 299 ~l~~P~l 305 (436)
++.-+++
T Consensus 205 ~l~a~~~ 211 (226)
T 1w0m_A 205 AVKAKDP 211 (226)
T ss_dssp HHTCSSH
T ss_pred HHCCcCH
Confidence 9987773
No 401
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.47 E-value=0.56 Score=47.22 Aligned_cols=62 Identities=21% Similarity=0.280 Sum_probs=45.7
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
+.++|+|.|.++... |. +...++.+..+.+.++++||++ |++.+.+++..+.+.|||+|.+|
T Consensus 161 ~~~~G~d~i~i~~~~----g~--------~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 161 LVKAHVDILVIDSAH----GH--------STRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHTTCSEEEECCSC----CS--------SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHCCCCEEEEeCCC----CC--------hHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 345899999985311 21 1123667777777665899987 77889999999999999999994
No 402
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=87.46 E-value=5.7 Score=37.41 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=77.2
Q ss_pred CCCcEEEEEcCCC-HHHHHHHHHHHH-HCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 123 EQHPIVLQIGGSN-LDNLAKATELAN-AYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 123 ~~~pi~vQL~g~~-p~~~~~aA~~~~-~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
.+.++++=+--+| |.....+++.+. ++|+|.+.+|. ||+ .+++++..+..+.-|+|-
T Consensus 75 ~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~------------~~G---------~~~l~~~~~~~~~gv~vL 133 (255)
T 3qw3_A 75 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP------------YMG---------SDSLQPFMRYPDKAVFVL 133 (255)
T ss_dssp TTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC------------TTC---------HHHHHHHHTCTTSEEEEE
T ss_pred CCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcc------------cCC---------HHHHHHHHHhhCCceEEE
Confidence 4667877775445 566666676664 79999999984 222 133444444444456666
Q ss_pred eccCCCC---CC-------c-HHHHHHHHHHH-hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCc
Q 013784 201 CRIGVDD---HD-------S-YNQLCDFIYKV-SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL 268 (436)
Q Consensus 201 iR~G~~~---~~-------~-~~~~~~~la~~-~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~i 268 (436)
+...-.. .. + ++.+.+. ++. +.++|.+.+++.+.. -+.+..+.+..++.
T Consensus 134 ~~tS~~~~~~~q~~~~~~~~~~~~V~~~-a~~~~~~~g~~GvV~~at~------------------~~e~~~ir~~~~~~ 194 (255)
T 3qw3_A 134 CKTSNKGSNDLQCLRVGDRYLYEAVAER-AEGPWNVNGNVGLVVGATD------------------PVALARVRARAPTL 194 (255)
T ss_dssp EECCSGGGGTTTTSEETTEEHHHHHHHH-HHTGGGGGSCEEEEECSSC------------------HHHHHHHHHHCSSC
T ss_pred EeCCCccHHHHHhcccCCCCHHHHHHHH-HHHHhhhhCCeEEEECCCC------------------HHHHHHHHHHCCCC
Confidence 5553221 11 1 2334333 223 344889999775321 11223444444454
Q ss_pred EEEEeCCCCC-HHHHHHHHHcCCC----e--eeehHHHHhCCc
Q 013784 269 TFTLNGGINT-VDEVNAALRKGAH----H--VMVGRAAYQNPW 304 (436)
Q Consensus 269 PVIanGgI~s-~~da~~~l~~Gad----~--VmiGRa~l~~P~ 304 (436)
+++ .=||.- ..+..++++.|+| + +.+||+++.-++
T Consensus 195 ~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A~d 236 (255)
T 3qw3_A 195 WFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAAD 236 (255)
T ss_dssp CEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTSSC
T ss_pred eEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCCCC
Confidence 544 444431 2245566667888 5 999999998765
No 403
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=87.45 E-value=3.9 Score=39.76 Aligned_cols=92 Identities=12% Similarity=0.111 Sum_probs=62.0
Q ss_pred ChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHH
Q 013784 178 DPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEY 257 (436)
Q Consensus 178 ~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~ 257 (436)
.++.+.+.++.+++.++.|+.|.+-.. + ..+.+.+ +.+.++|+|.|.+|+... .+.
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~--~~~~~~~----~~a~~~g~d~V~~~~g~p-----------------~~~ 102 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S--PFVEDIV----DLVIEEGVKVVTTGAGNP-----------------SKY 102 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S--TTHHHHH----HHHHHTTCSEEEECSSCG-----------------GGT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C--CCHHHHH----HHHHHCCCCEEEECCCCh-----------------HHH
Confidence 567778888888887778887765431 1 1233332 234568999999986321 122
Q ss_pred HHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee-hH
Q 013784 258 YYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV-GR 297 (436)
Q Consensus 258 v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi-GR 297 (436)
+..+.+ . ++||+. .|.+.+++..+.+.|+|+|.+ |+
T Consensus 103 i~~l~~-~-g~~v~~--~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 103 MERFHE-A-GIIVIP--VVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHH-T-TCEEEE--EESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHH-c-CCeEEE--EeCCHHHHHHHHHcCCCEEEEECC
Confidence 334433 3 788885 478999999888899999998 54
No 404
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.41 E-value=0.67 Score=45.19 Aligned_cols=86 Identities=15% Similarity=-0.063 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
++.+.+.+.. +.+.|+|.|.+-|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 44 ~~~l~~lv~~-li~~Gv~Gi~v~GtTGE~~~Ls~~E-------r~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A 115 (315)
T 3na8_A 44 LPALGRSIER-LIDGGVHAIAPLGSTGEGAYLSDPE-------WDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFA 115 (315)
T ss_dssp HHHHHHHHHH-HHHTTCSEEECSSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 4455554443 4469999999998775322222211 133444444432 368888654444555544433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 116 ~~~Gadavlv~~P~y~~~s 134 (315)
T 3na8_A 116 ESLGAEAVMVLPISYWKLN 134 (315)
T ss_dssp HHTTCSEEEECCCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 389999999988887774
No 405
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=87.38 E-value=0.65 Score=45.90 Aligned_cols=86 Identities=9% Similarity=0.047 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 51 ~~~l~~lv~~l-i~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 122 (343)
T 2v9d_A 51 KPGTAALIDDL-IKAGVDGLFFLGSGGEFSQLGAEE-------RKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHA 122 (343)
T ss_dssp HHHHHHHHHHH-HHTTCSCEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEeCccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 44454544433 458999999998775322222211 133344444332 368987544433444444333
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 123 ~~~Gadavlv~~P~Y~~~s 141 (343)
T 2v9d_A 123 QQAGADGIVVINPYYWKVS 141 (343)
T ss_dssp HHHTCSEEEEECCSSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 379999999998887774
No 406
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=87.38 E-value=0.6 Score=44.92 Aligned_cols=86 Identities=14% Similarity=0.142 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+.. +.+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 21 ~~~l~~lv~~-li~~Gv~gl~~~GttGE~~~Ls~~E-------r~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a 92 (291)
T 3tak_A 21 WKSLEKLVEW-HIEQGTNSIVAVGTTGEASTLSMEE-------HTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAA 92 (291)
T ss_dssp HHHHHHHHHH-HHHHTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHCCCCEEEECccccccccCCHHH-------HHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 4444444443 3458999999988774322222211 133343334332 368988654444555554433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 93 ~~~Gadavlv~~P~y~~~~ 111 (291)
T 3tak_A 93 KDLGADAALLVTPYYNKPT 111 (291)
T ss_dssp HHHTCSEEEEECCCSSCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 379999999988887775
No 407
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=87.15 E-value=0.72 Score=45.34 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEE-EeCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVI-anGgI~s~~da~~~l-- 286 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++..+ +.+.+..+++.. .++||| +.|+..+.+.++.+.
T Consensus 54 ~~~l~~lv~~l-i~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 125 (332)
T 2r8w_A 54 IEAFSALIARL-DAAEVDSVGILGSTGIYMYLTREE-------RRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDA 125 (332)
T ss_dssp HHHHHHHHHHH-HHHTCSEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHH
Confidence 44444444433 458999999998775322222211 233444444432 269997 556655444443332
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+|++-...+..|.
T Consensus 126 ~~~Gadavlv~~P~Y~~~s 144 (332)
T 2r8w_A 126 EAAGADALLLAPVSYTPLT 144 (332)
T ss_dssp HHHTCSEEEECCCCSSCCC
T ss_pred HhcCCCEEEECCCCCCCCC
Confidence 379999999988887764
No 408
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=86.94 E-value=23 Score=34.19 Aligned_cols=195 Identities=10% Similarity=0.051 Sum_probs=107.1
Q ss_pred CChHHHHHHHHHc--CCC-cEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLARLI--SKH-AWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~~~--Gg~-gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+.-..++.++... .|+ |+++.+...--..+...++ ++...+......|+++.+.+++.++-.+.++.+++.|+|
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 4556777776322 344 5555543332111111111 111222334567999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCC-CC-CcHHHHHHHHHHHhhcC-CccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD-DH-DSYNQLCDFIYKVSSLS-PTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~-~~-~~~~~~~~~la~~~e~~-Gvd~ 229 (436)
++-+ -.|.-.. + . ...+-+.+-.++|.+++++||.+=--.+.. .. -+.+.+ .+++++. .+-+
T Consensus 109 avlv--~~P~y~~-k--p------~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~----~~La~~~pnIvg 173 (318)
T 3qfe_A 109 YVLV--LPPAYFG-K--A------TTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMI----TTIARKNPNVVG 173 (318)
T ss_dssp EEEE--CCCCC------C------CCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHH----HHHHHHCTTEEE
T ss_pred EEEE--eCCcccC-C--C------CCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHH----HHHHhhCCCEEE
Confidence 9877 3453211 0 0 134667888888888889998876544332 11 123322 3344322 2333
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC--CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP--DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~--~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
|--.. | ++..+.++.+... ++ .+.+|+= +.+...+..|++|++.+.+-+ .|.++.
T Consensus 174 iKdss------g------------d~~~~~~~~~~~~~~~f-~v~~G~d---~~~l~~l~~G~~G~is~~an~-~P~~~~ 230 (318)
T 3qfe_A 174 VKLTC------A------------SVGKITRLAATLPPAAF-SVFGGQS---DFLIGGLSVGSAGCIAAFANV-FPKTVS 230 (318)
T ss_dssp EEESS------C------------CHHHHHHHHHHSCGGGC-EEEESCG---GGHHHHHHTTCCEEECGGGGT-CHHHHH
T ss_pred EEeCC------C------------CHHHHHHHHHhcCCCCE-EEEEecH---HHHHHHHHCCCCEEEecHHHh-hHHHHH
Confidence 32110 1 1455555554332 33 3455532 335567779999999888753 466554
Q ss_pred hhhh
Q 013784 308 GHVD 311 (436)
Q Consensus 308 ~~~~ 311 (436)
+-++
T Consensus 231 ~l~~ 234 (318)
T 3qfe_A 231 KIYE 234 (318)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 409
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=86.93 E-value=21 Score=33.85 Aligned_cols=148 Identities=13% Similarity=0.115 Sum_probs=92.4
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++-.+.++.+++.|+|++-+.. |.-. + ...+-+.+-.++|.+++++||.+=-
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~--P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 67 NGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS--PYYN--K---------PTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp TTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC--CCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 3567999999999999999999999999999987763 4321 1 2346677777888888899987643
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHhh-cCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVSS-LSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI 276 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~e-~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI 276 (436)
|.|.+- +.+.+ .++++ .-.+.+|--.. | ++..+.++++..+ ++.| .+|+
T Consensus 134 ~P~~tg~~l--~~~~~----~~La~~~pnIvgiK~s~------g------------d~~~~~~~~~~~~~~f~v-~~G~- 187 (292)
T 2vc6_A 134 IPGRSAIEI--HVETL----ARIFEDCPNVKGVXDAT------G------------NLLRPSLERMACGEDFNL-LTGE- 187 (292)
T ss_dssp CHHHHSCCC--CHHHH----HHHHHHCTTEEEEEECS------C------------CTHHHHHHHHHSCTTSEE-EESC-
T ss_pred CccccCcCC--CHHHH----HHHHhhCCCEEEEecCC------C------------CHHHHHHHHHHcCCCEEE-EECc-
Confidence 345433 23333 23333 22333333211 1 1334445554443 5655 4774
Q ss_pred CCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 277 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
-+.+...+..|++|++.|.+-+ .|.++.+..+
T Consensus 188 --d~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~ 219 (292)
T 2vc6_A 188 --DGTALGYMAHGGHGCISVTANV-APALCADFQQ 219 (292)
T ss_dssp --GGGHHHHHHTTCCEEEESGGGT-CHHHHHHHHH
T ss_pred --hHHHHHHHHcCCCEEEecHHHh-CHHHHHHHHH
Confidence 2345667779999999998865 4766544333
No 410
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=86.70 E-value=1 Score=44.87 Aligned_cols=86 Identities=15% Similarity=0.076 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
.+.+.+.+. .+.+.|++.|.+.|-|....-++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 79 ~~al~~lv~-~li~~Gv~Gl~v~GTTGE~~~Ls~eE-------r~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A 150 (360)
T 4dpp_A 79 LEAYDDLVN-IQIQNGAEGVIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQG 150 (360)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEESSTTTTGGGSCHHH-------HHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEecccccChhhCCHHH-------HHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 444444443 34469999999988774322222211 133344444432 368998644434444444433
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+|++-...+..|.
T Consensus 151 ~~~Gadavlvv~PyY~k~s 169 (360)
T 4dpp_A 151 FAVGMHAALHINPYYGKTS 169 (360)
T ss_dssp HHTTCSEEEEECCCSSCCC
T ss_pred HHcCCCEEEEcCCCCCCCC
Confidence 379999999887776664
No 411
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.56 E-value=24 Score=33.98 Aligned_cols=189 Identities=10% Similarity=0.058 Sum_probs=108.6
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCC-
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNY- 151 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~- 151 (436)
+....++.++. +.|-.|+++.+...--......++ ++...+......|+++.+.+++.++-.+.++.+++.|+
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 44556666653 445446666553332211111111 12222334456799999999999999999999999997
Q ss_pred CEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCcc
Q 013784 152 DEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTR 228 (436)
Q Consensus 152 d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd 228 (436)
|++-+- .|.-. . -..+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++++.-.+-
T Consensus 105 davlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~~pnIv 165 (311)
T 3h5d_A 105 AAGLAI--VPYYN-------K----PSQEGMYQHFKAIADASDLPIIIYNIPGRVVVEL--TPETM----LRLADHPNII 165 (311)
T ss_dssp SEEEEE--CCCSS-------C----CCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCC--CHHHH----HHHHTSTTEE
T ss_pred cEEEEc--CCCCC-------C----CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCC--CHHHH----HHHhcCCCEE
Confidence 988764 34421 1 2345677888888888899988754 445443 23333 3343322222
Q ss_pred EEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchh
Q 013784 229 HFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTL 307 (436)
Q Consensus 229 ~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~ 307 (436)
+|--.. ++..+.++++..+ ++. +.+|+= +.+...+..|++|++.|.+-+. |.++.
T Consensus 166 giKdss-------------------d~~~~~~~~~~~~~~f~-v~~G~d---~~~l~~l~~Ga~G~is~~an~~-P~~~~ 221 (311)
T 3h5d_A 166 GVKECT-------------------SLANMAYLIEHKPEEFL-IYTGED---GDAFHAMNLGADGVISVASHTN-GDEMH 221 (311)
T ss_dssp EEEECS-------------------CHHHHHHHHHHCCSSCE-EEECCG---GGHHHHHHHTCCEEEESTHHHH-HHHHH
T ss_pred EEEeCC-------------------CHHHHHHHHHHcCCCEE-EEECcH---HHHHHHHHcCCCEEEechhhhC-HHHHH
Confidence 222110 1555556655543 344 456641 3355667789999999988644 55543
Q ss_pred hhh
Q 013784 308 GHV 310 (436)
Q Consensus 308 ~~~ 310 (436)
+-.
T Consensus 222 ~l~ 224 (311)
T 3h5d_A 222 EMF 224 (311)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 412
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=86.51 E-value=7.1 Score=38.84 Aligned_cols=123 Identities=7% Similarity=0.024 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKiR~G~~~~~~~ 211 (436)
..++.+++.++.+.+.||..+-+..|- .+++.=.+.++++|+++| +.+.+=.--+|+ .
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~Kikvg~----------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~----~ 222 (388)
T 4h83_A 163 EPLGSIADEMHNYQELGLAGVKFKVGG----------------LSAAEDAARITAAREAAGDDFIICIDANQGYK----P 222 (388)
T ss_dssp CTTCSHHHHHHHHHHHTBSEEEEECSS----------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHcCCceEeecCCC----------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCC----H
Confidence 345777888888888899999876432 223333456777777764 444443334443 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCC-ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC-
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPP-LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG- 289 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~-~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G- 289 (436)
.+..++ .+.+++.++.+|- . .+++ -+++....+.+.. ++||.+-=.+.+..++.++++.|
T Consensus 223 ~~A~~~-~~~l~~~~~~~iE----e------------P~~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~i~~~a 284 (388)
T 4h83_A 223 AVAVDL-SRRIADLNIRWFE----E------------PVEWHNDKRSMRDVRYQG-SVPVCAGQTEFSASGCRDLMETGA 284 (388)
T ss_dssp HHHHHH-HHHTTTSCCCCEE----S------------CBCSTTHHHHHHHHHHHS-SSCEEECTTCSSHHHHHHHHHHTC
T ss_pred HHHHHH-HHHhhhcCcceee----c------------CcccccchHHHHHHHhhc-CCCccCCccccChHhHHHHHHcCC
Confidence 344443 4556777776654 1 1122 1255566666664 89999988999999999999855
Q ss_pred CCeee
Q 013784 290 AHHVM 294 (436)
Q Consensus 290 ad~Vm 294 (436)
+|.|+
T Consensus 285 ~d~i~ 289 (388)
T 4h83_A 285 IDVCN 289 (388)
T ss_dssp CSEEC
T ss_pred CCeEe
Confidence 67765
No 413
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.46 E-value=0.84 Score=44.36 Aligned_cols=82 Identities=12% Similarity=-0.022 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEe-CCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLN-GGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIan-GgI~s~~da~~~l-- 286 (436)
.+.+.+.+.. +.+.|+|.|.+.|-|....-++..+ +.+.+..+++.. .++|||+. |+..+.+.++.+.
T Consensus 28 ~~~l~~lv~~-li~~Gv~gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A 99 (309)
T 3fkr_A 28 LASQKRAVDF-MIDAGSDGLCILANFSEQFAITDDE-------RDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRA 99 (309)
T ss_dssp HHHHHHHHHH-HHHTTCSCEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHH
Confidence 4444444443 3469999999998775322222211 133444444432 37999865 5554444443332
Q ss_pred -HcCCCeeeehHHHH
Q 013784 287 -RKGAHHVMVGRAAY 300 (436)
Q Consensus 287 -~~Gad~VmiGRa~l 300 (436)
+.|||+|++-..++
T Consensus 100 ~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHTTCSEEEECCSCB
T ss_pred HHcCCCEEEEcCCCC
Confidence 38999999988876
No 414
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.26 E-value=2.8 Score=40.49 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=62.4
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCC
Q 013784 171 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTI 250 (436)
Q Consensus 171 yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i 250 (436)
.|+..+.+.+++.++- .++.||.+|.-...+ .+|+...+. .+.+.|.+.|++-=|...+ +. ++
T Consensus 137 IgA~~~~n~~LLr~va-----~~gkPVilK~Gms~t----~~ei~~ave-~i~~~Gn~~iiL~erg~~y-~~---~~--- 199 (298)
T 3fs2_A 137 IPAFLCRQTDLLIAAA-----RTGRVVNVKKGQFLA----PWDMKNVLA-KITESGNPNVLATERGVSF-GY---NT--- 199 (298)
T ss_dssp ECGGGTTCHHHHHHHH-----HTTSEEEEECCTTCC----GGGHHHHHH-HHHTTTCCCEEEEECCEEC-SS---SC---
T ss_pred ECccccCCHHHHHHHH-----ccCCcEEEeCCCCCC----HHHHHHHHH-HHHHcCCCeEEEEECCCCC-CC---CC---
Confidence 4777778888665432 458999999776322 223333222 3346788777764333322 11 11
Q ss_pred CCccHHHHHHHHhcCCCcEEEEe---------------CCCCC--HHHHHHHHHcCCCeeeehH
Q 013784 251 PPLKYEYYYALLRDFPDLTFTLN---------------GGINT--VDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 251 ~~~~~~~v~~l~~~~~~iPVIan---------------GgI~s--~~da~~~l~~Gad~VmiGR 297 (436)
..+++..+..+++ + ++||+.. ||.++ ..-+.++...||||++|=+
T Consensus 200 ~~vdl~~i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~ 261 (298)
T 3fs2_A 200 LVSDMRALPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIET 261 (298)
T ss_dssp EECCTTHHHHHHT-T-TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEE
T ss_pred CccCHHHHHHHHH-c-CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEe
Confidence 1134566667666 6 9999983 33222 2345567779999999754
No 415
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.24 E-value=0.56 Score=45.74 Aligned_cols=85 Identities=9% Similarity=-0.046 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR-- 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~-- 287 (436)
++.+.+.+. .+.+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.-|- +.+++.+..+
T Consensus 32 ~~~l~~lv~-~li~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A 102 (316)
T 3e96_A 32 WHHYKETVD-RIVDNGIDVIVPCGNTSEFYALSLEE-------AKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAA 102 (316)
T ss_dssp HHHHHHHHH-HHHTTTCCEECTTSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEeCccccCcccCCHHH-------HHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHH
Confidence 444545444 34469999999988774322222211 133444444432 36898865443 6666655443
Q ss_pred --cCCCeeeehHHHHhCCc
Q 013784 288 --KGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 288 --~Gad~VmiGRa~l~~P~ 304 (436)
.|||+||+-..++..|.
T Consensus 103 ~~~Gadavlv~~P~y~~~s 121 (316)
T 3e96_A 103 KAAGADAVMIHMPIHPYVT 121 (316)
T ss_dssp HHHTCSEEEECCCCCSCCC
T ss_pred HhcCCCEEEEcCCCCCCCC
Confidence 79999999877765553
No 416
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=86.19 E-value=2.8 Score=38.46 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=75.7
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC--CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNC--GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~--gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
..++..|...|...+.+.++.+.+.|+|.+.+.. |.-.+.. .+| .++++++++.++.|+.|-+-
T Consensus 7 ~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~----~~~----------~~~~~~lr~~~~~~~~v~lm 72 (228)
T 1h1y_A 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNL----TIG----------APVIQSLRKHTKAYLDCHLM 72 (228)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB----CBC----------HHHHHHHHTTCCSEEEEEEE
T ss_pred CeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcch----hhC----------HHHHHHHHhhcCCcEEEEEE
Confidence 4467788888888888899999999999766652 2111110 112 25666677766667665443
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCcc-HHHHHHHHhcCCCcEEEEeCCCCCH-H
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK-YEYYYALLRDFPDLTFTLNGGINTV-D 280 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~-~~~v~~l~~~~~~iPVIanGgI~s~-~ 280 (436)
. ++...+ . ...+ ++|+|.|++|+-.. + .. .+.+..+.+ . ++.++..=.-.+. +
T Consensus 73 v--~d~~~~---i---~~~~-~agad~v~vH~~~~------~--------~~~~~~~~~i~~-~-g~~igv~~~p~t~~e 127 (228)
T 1h1y_A 73 V--TNPSDY---V---EPLA-KAGASGFTFHIEVS------R--------DNWQELIQSIKA-K-GMRPGVSLRPGTPVE 127 (228)
T ss_dssp S--SCGGGG---H---HHHH-HHTCSEEEEEGGGC------T--------TTHHHHHHHHHH-T-TCEEEEEECTTSCGG
T ss_pred e--cCHHHH---H---HHHH-HcCCCEEEECCCCc------c--------cHHHHHHHHHHH-c-CCCEEEEEeCCCCHH
Confidence 3 222222 1 2222 38999999997432 0 11 223344433 3 5555443333344 3
Q ss_pred HHHHHHHc--CCCeeeehH
Q 013784 281 EVNAALRK--GAHHVMVGR 297 (436)
Q Consensus 281 da~~~l~~--Gad~VmiGR 297 (436)
.+...+.. ++|.|.++.
T Consensus 128 ~~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 128 EVFPLVEAENPVELVLVMT 146 (228)
T ss_dssp GGHHHHHSSSCCSEEEEES
T ss_pred HHHHHHhcCCCCCEEEEEe
Confidence 34444444 899999854
No 417
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=86.15 E-value=1.1 Score=42.98 Aligned_cols=85 Identities=13% Similarity=0.036 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH---H
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL---R 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l---~ 287 (436)
.+.+.+.+.. +.+.|++.|.+.|-|.....++.. .+.+.+..+++...+ -|.+.|+..+.+.++.+. +
T Consensus 18 ~~~l~~lv~~-li~~Gv~gl~v~GttGE~~~Ls~~-------Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~ 88 (286)
T 2r91_A 18 PELFANHVKN-ITSKGVDVVFVAGTTGLGPALSLQ-------EKMELTDAATSAARR-VIVQVASLNADEAIALAKYAES 88 (286)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEETSTTTTGGGSCHH-------HHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHCCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHh
Confidence 3344444333 345899999999877532222221 123445555555545 455677766555544333 3
Q ss_pred cCCCeeeehHHHHhC-Cc
Q 013784 288 KGAHHVMVGRAAYQN-PW 304 (436)
Q Consensus 288 ~Gad~VmiGRa~l~~-P~ 304 (436)
.|||+||+-...+.. |.
T Consensus 89 ~Gadavlv~~P~y~~~~s 106 (286)
T 2r91_A 89 RGAEAVASLPPYYFPRLS 106 (286)
T ss_dssp TTCSEEEECCSCSSTTCC
T ss_pred cCCCEEEEcCCcCCCCCC
Confidence 899999999988877 54
No 418
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.10 E-value=0.63 Score=45.37 Aligned_cols=85 Identities=11% Similarity=0.003 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEE-EeCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFT-LNGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVI-anGgI~s~~da~~~l-- 286 (436)
++.+.+.+..+ .+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++||| +.|+ .+.+.++.+.
T Consensus 32 ~~~l~~lv~~l-i~~Gv~gl~v~GtTGE~~~Ls~eE-------r~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A 102 (314)
T 3d0c_A 32 WKGLDDNVEFL-LQNGIEVIVPNGNTGEFYALTIEE-------AKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSA 102 (314)
T ss_dssp HHHHHHHHHHH-HHTTCSEECTTSGGGTGGGSCHHH-------HHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEECcccCChhhCCHHH-------HHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHH
Confidence 44454544433 458999999988775322232211 233444444432 368987 6677 4444333332
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+|++-...+..|.
T Consensus 103 ~~~Gadavlv~~P~y~~~s 121 (314)
T 3d0c_A 103 IDSGADCVMIHQPVHPYIT 121 (314)
T ss_dssp HHTTCSEEEECCCCCSCCC
T ss_pred HHcCCCEEEECCCCCCCCC
Confidence 389999999988887774
No 419
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.96 E-value=10 Score=35.64 Aligned_cols=101 Identities=10% Similarity=0.024 Sum_probs=61.7
Q ss_pred cCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC-CCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEE
Q 013784 120 FSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNC-GCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVS 198 (436)
Q Consensus 120 ~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~-gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvs 198 (436)
.+..+.|++ =+...|. -.|++++++|||.|=+.- +.-. .. +|-....-..+.+...+++|++.+++||.
T Consensus 15 l~~~~~~i~-~~~ayD~----~sA~~~~~aG~dai~vg~~s~a~--~~---G~pD~~~vt~~em~~~~~~I~r~~~~pvi 84 (255)
T 2qiw_A 15 DHESGKLLV-LPTVWDT----WSAGLVEEAGFSGLTIGSHPVAD--AT---GSSDGENMNFADYMAVVKKITSAVSIPVS 84 (255)
T ss_dssp HHHTCCCEE-CCEESSH----HHHHHHHHTTCSCEEECHHHHHH--HT---TCCTTTCSCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHhCCCcEE-EecCcCH----HHHHHHHHcCCCEEEEChHHHHH--hC---CCCCCCCcCHHHHHHHHHHHHhcCCCCEE
Confidence 333445543 2333444 467788899999887752 1111 11 11222234566777777888888889999
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCc
Q 013784 199 VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 236 (436)
Q Consensus 199 vKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt 236 (436)
+=+..|+... . .+.+.++. ++|+++|.+-+..
T Consensus 85 aD~~~Gyg~~--~---~~~~~~l~-~aGa~gv~iEd~~ 116 (255)
T 2qiw_A 85 VDVESGYGLS--P---ADLIAQIL-EAGAVGINVEDVV 116 (255)
T ss_dssp EECTTCTTCC--H---HHHHHHHH-HTTCCEEEECSEE
T ss_pred eccCCCcCcH--H---HHHHHHHH-HcCCcEEEECCCC
Confidence 9999996432 2 23334444 5999999997643
No 420
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=85.82 E-value=9.1 Score=36.91 Aligned_cols=120 Identities=9% Similarity=0.057 Sum_probs=74.7
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
++.|+. .+....++.++. +.|-.|+++.+...--..+...++ ++...+......|+++++.+++.++-.+.
T Consensus 16 ~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~l 95 (309)
T 3fkr_A 16 VPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAAR 95 (309)
T ss_dssp CCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHH
T ss_pred eeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHH
Confidence 445663 255667777763 445446666553332222111111 11122223456799999999999999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
++.+++.|+|++-+- .|.- +...--..+-+.+-.++|.+++++||.+=-
T Consensus 96 a~~A~~~Gadavlv~--~Pyy--------~~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 96 SLRAQQLGAAMVMAM--PPYH--------GATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp HHHHHHTTCSEEEEC--CSCB--------TTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHcCCCEEEEc--CCCC--------ccCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999998774 3542 110002456678888888888899987754
No 421
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=85.78 E-value=2.1 Score=38.32 Aligned_cols=81 Identities=12% Similarity=0.007 Sum_probs=51.8
Q ss_pred CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEe
Q 013784 195 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLN 273 (436)
Q Consensus 195 iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIan 273 (436)
.|+..-+|.. +.++..+ +++.+.+.|++.|.+|-++. + ..+.+..+.+.++ ++ +|+.
T Consensus 10 ~~~i~~~~~~-----~~~~~~~-~~~~~~~~G~~~iev~~~~~---~------------~~~~i~~ir~~~~~~~-~ig~ 67 (205)
T 1wa3_A 10 HKIVAVLRAN-----SVEEAKE-KALAVFEGGVHLIEITFTVP---D------------ADTVIKELSFLKEKGA-IIGA 67 (205)
T ss_dssp HCEEEEECCS-----SHHHHHH-HHHHHHHTTCCEEEEETTST---T------------HHHHHHHTHHHHHTTC-EEEE
T ss_pred CCEEEEEecC-----CHHHHHH-HHHHHHHCCCCEEEEeCCCh---h------------HHHHHHHHHHHCCCCc-EEEe
Confidence 3565555541 2333333 34556779999999986542 0 0334445544432 33 5677
Q ss_pred CCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 274 GGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 274 GgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
|-+.+++++.++.+.|||.| ++-+
T Consensus 68 ~~v~~~~~~~~a~~~Gad~i-v~~~ 91 (205)
T 1wa3_A 68 GTVTSVEQCRKAVESGAEFI-VSPH 91 (205)
T ss_dssp ESCCSHHHHHHHHHHTCSEE-ECSS
T ss_pred cccCCHHHHHHHHHcCCCEE-EcCC
Confidence 78899999999999999999 6644
No 422
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.77 E-value=4.9 Score=37.17 Aligned_cols=128 Identities=12% Similarity=0.048 Sum_probs=73.4
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc-CCCC---CCcHHHHHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI-GVDD---HDSYNQLCDFI 218 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~-G~~~---~~~~~~~~~~l 218 (436)
|..+++.|+|-|||+.+=.. | .+--...++..+... .+.+++||-|-+|+ |-+- ..+++.+.+-+
T Consensus 14 a~~A~~~GAdRIELc~~L~~---------G-GlTPS~g~i~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di 82 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLAV---------G-GTTPSYGVIKEANQY-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDI 82 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGGG---------T-CBCCCHHHHHHHHHH-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCccc---------C-CcCCCHHHHHHHHHh-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHH
Confidence 44567789999999853111 1 122233344333211 15678999999998 2221 12344444443
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCC-----CCHHHHHHHHH-cCCCe
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGI-----NTVDEVNAALR-KGAHH 292 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI-----~s~~da~~~l~-~Gad~ 292 (436)
+.+.+.|+|.|.+=.-+. + +.++.+...++++....+||...=-+ .|+..+.+.+. .|++.
T Consensus 83 -~~~~~~GadGvV~G~Lt~--------d----g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~r 149 (224)
T 2bdq_A 83 -LRAVELESDALVLGILTS--------N----NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTR 149 (224)
T ss_dssp -HHHHHTTCSEEEECCBCT--------T----SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCE
T ss_pred -HHHHHcCCCEEEEeeECC--------C----CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCE
Confidence 345679999998732221 1 23456777777655446777664333 56666665554 88888
Q ss_pred ee
Q 013784 293 VM 294 (436)
Q Consensus 293 Vm 294 (436)
|.
T Consensus 150 IL 151 (224)
T 2bdq_A 150 IL 151 (224)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 423
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=85.69 E-value=26 Score=33.70 Aligned_cols=191 Identities=12% Similarity=0.070 Sum_probs=109.6
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCC
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATELANAYNYD 152 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d 152 (436)
+.-..+++++. +.|-.|+++.+...--......++ ++...+......|+++.+.+++.++-.+.++.+++.|+|
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 45566777653 345345665543322111111111 111222334557999999999999999999999999999
Q ss_pred EEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHHhhcCCccE
Q 013784 153 EINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKVSSLSPTRH 229 (436)
Q Consensus 153 ~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~~e~~Gvd~ 229 (436)
++-+- .|.-. + -..+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++++.-.+-+
T Consensus 121 avlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l--~~~~~----~~La~~pnIvg 181 (314)
T 3qze_A 121 ACLLV--TPYYN--K---------PTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDM--LPETV----ERLSKVPNIIG 181 (314)
T ss_dssp EEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCC--CHHHH----HHHHTSTTEEE
T ss_pred EEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCC--CHHHH----HHHhcCCCEEE
Confidence 98765 34421 1 2346678888888888899987753 345433 23333 33433222333
Q ss_pred EEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHHhCCcchhh
Q 013784 230 FIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 230 I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
|--.. | ++..+.++++..+ ++. +.+|+= +.+...+..|++|+..+.+-+ .|..+.+
T Consensus 182 iKdss------g------------d~~~~~~~~~~~~~~f~-v~~G~d---~~~l~~l~~Ga~G~is~~an~-~P~~~~~ 238 (314)
T 3qze_A 182 IKEAT------G------------DLQRAKEVIERVGKDFL-VYSGDD---ATAVELMLLGGKGNISVTANV-APRAMSD 238 (314)
T ss_dssp EEECS------C------------CHHHHHHHHHHSCTTSE-EEESCG---GGHHHHHHTTCCEEEESGGGT-CHHHHHH
T ss_pred EEcCC------C------------CHHHHHHHHHHcCCCeE-EEecCh---HHHHHHHHCCCCEEEecHHhh-hHHHHHH
Confidence 32110 1 1455556655443 454 466652 235667789999999888764 4665443
Q ss_pred hhh
Q 013784 309 HVD 311 (436)
Q Consensus 309 ~~~ 311 (436)
-.+
T Consensus 239 l~~ 241 (314)
T 3qze_A 239 LCA 241 (314)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 424
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=85.62 E-value=1.2 Score=42.93 Aligned_cols=85 Identities=15% Similarity=0.048 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR--- 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~--- 287 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++.. .+.+.+..+++...+ -|.+.|+..+.+.++.+..
T Consensus 19 ~~~l~~lv~~l-i~~Gv~gl~~~GttGE~~~Ls~e-------Er~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 19 KEKLKIHAENL-IRKGIDKLFVNGTTGLGPSLSPE-------EKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEESSTTTTGGGSCHH-------HHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHh
Confidence 44444444433 45899999999877532222221 123444455554434 3456677655555544443
Q ss_pred cCCCeeeehHHHHhC-Cc
Q 013784 288 KGAHHVMVGRAAYQN-PW 304 (436)
Q Consensus 288 ~Gad~VmiGRa~l~~-P~ 304 (436)
.|||+||+-...+.. |.
T Consensus 90 ~Gadavlv~~P~y~~~~s 107 (293)
T 1w3i_A 90 FDIVGIASYAPYYYPRMS 107 (293)
T ss_dssp SCCSEEEEECCCSCSSCC
T ss_pred cCCCEEEEcCCCCCCCCC
Confidence 799999999998877 64
No 425
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=85.59 E-value=1.7 Score=42.37 Aligned_cols=83 Identities=17% Similarity=0.149 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAAL--- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l--- 286 (436)
++.+.+.+. .+.+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+.=|=.+.+++.+..
T Consensus 31 ~~~l~~lv~-~li~~Gv~gl~v~GtTGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 102 (318)
T 3qfe_A 31 LASQERYYA-YLARSGLTGLVILGTNAEAFLLTREE-------RAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDA 102 (318)
T ss_dssp HHHHHHHHH-HHHTTTCSEEEESSGGGTGGGSCHHH-------HHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHcCCCEEEeCccccChhhCCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 444444443 44468999999998775322222211 133444444432 368988544434444444433
Q ss_pred -HcCCCeeeehHHHHh
Q 013784 287 -RKGAHHVMVGRAAYQ 301 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~ 301 (436)
+.|||+|++-...+.
T Consensus 103 ~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 103 SVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHTCSEEEECCCCC-
T ss_pred HHcCCCEEEEeCCccc
Confidence 379999999998554
No 426
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=85.50 E-value=2.8 Score=39.88 Aligned_cols=80 Identities=13% Similarity=0.190 Sum_probs=48.2
Q ss_pred HHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCC--C---cHHH
Q 013784 139 LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDH--D---SYNQ 213 (436)
Q Consensus 139 ~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~--~---~~~~ 213 (436)
+.+..+.+.+.|||.|||+-|+=.- ..+.-.++++.++ +. +.|+.-.|..+. + +..+
T Consensus 112 ~~~yl~~~k~lGF~~IEISdGti~l--------------~~~~~~~lI~~a~---~~-f~Vl~EvG~K~~~~~~~~~~~~ 173 (276)
T 1u83_A 112 VNEFHRYCTYFGCEYIEISNGTLPM--------------TNKEKAAYIADFS---DE-FLVLSEVGSKDAELASRQSSEE 173 (276)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSCC--------------CHHHHHHHHHHHT---TT-SEEEEECSCCC------CCSTH
T ss_pred HHHHHHHHHHcCCCEEEECCCcccC--------------CHHHHHHHHHHHH---hh-cEEeeeccccCccccCCCCHHH
Confidence 4455677889999999999775432 1233344444333 33 677777776554 1 3345
Q ss_pred HHHHHHHHhhcCCccEEEEccCcc
Q 013784 214 LCDFIYKVSSLSPTRHFIIHSRKA 237 (436)
Q Consensus 214 ~~~~la~~~e~~Gvd~I~vhgrt~ 237 (436)
+.+.+.+-++ +|++.|++-+|+.
T Consensus 174 ~I~~~~~dLe-AGA~~ViiEaRES 196 (276)
T 1u83_A 174 WLEYIVEDME-AGAEKVITEARES 196 (276)
T ss_dssp HHHHHHHHHH-HTEEEEEEC----
T ss_pred HHHHHHHHHH-CCCcEEEEeeecc
Confidence 5665555554 8999999999986
No 427
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=85.47 E-value=21 Score=34.02 Aligned_cols=158 Identities=11% Similarity=0.035 Sum_probs=86.2
Q ss_pred EEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec--cCCCC
Q 013784 130 QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR--IGVDD 207 (436)
Q Consensus 130 QL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR--~G~~~ 207 (436)
+....+.+++ +.+.++|++.|.+-.++....+.+ ..+-......+.+.++++.+++. |+.|..-+. .|..+
T Consensus 80 ~~l~~~~~~i----~~a~~aG~~~v~i~~~~s~~~~~~--~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~ 152 (302)
T 2ftp_A 80 AALAPNLKGF----EAALESGVKEVAVFAAASEAFSQR--NINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPY 152 (302)
T ss_dssp EEECCSHHHH----HHHHHTTCCEEEEEEESCHHHHHH--HHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTT
T ss_pred EEEeCCHHHH----HHHHhCCcCEEEEEEecCHHHHHH--HhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCc
Confidence 3333455544 344567999988744432111111 12333334555666666665543 555543332 22221
Q ss_pred --CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC--CCCC-HHHH
Q 013784 208 --HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINT-VDEV 282 (436)
Q Consensus 208 --~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG--gI~s-~~da 282 (436)
..+.+.+.+++ +.+.+.|+|.|.+..-. |.. .|....+.+..+.+.++++||..-| |--- .+.+
T Consensus 153 ~~~~~~~~~~~~~-~~~~~~G~d~i~l~DT~----G~~------~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~ 221 (302)
T 2ftp_A 153 DGDVDPRQVAWVA-RELQQMGCYEVSLGDTI----GVG------TAGATRRLIEAVASEVPRERLAGHFHDTYGQALANI 221 (302)
T ss_dssp TBCCCHHHHHHHH-HHHHHTTCSEEEEEESS----SCC------CHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHH
T ss_pred CCCCCHHHHHHHH-HHHHHcCCCEEEEeCCC----CCc------CHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHH
Confidence 12355566654 34457999999886211 321 1222366677776666578888776 4433 3567
Q ss_pred HHHHHcCCCeeeehHHHHh-CCcc
Q 013784 283 NAALRKGAHHVMVGRAAYQ-NPWY 305 (436)
Q Consensus 283 ~~~l~~Gad~VmiGRa~l~-~P~l 305 (436)
.++++.||+-|-..=+=++ ||+-
T Consensus 222 laAv~aGa~~vd~tv~GlG~cp~a 245 (302)
T 2ftp_A 222 YASLLEGIAVFDSSVAGLGGCPYA 245 (302)
T ss_dssp HHHHHTTCCEEEEBGGGCCBCGGG
T ss_pred HHHHHhCCCEEEecccccCCCCCC
Confidence 7788899999887655444 4753
No 428
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.02 E-value=1.2 Score=42.83 Aligned_cols=85 Identities=13% Similarity=-0.022 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH---
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR--- 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~--- 287 (436)
.+.+.+.+..+ .+.|++.|.+.|-|.....++.. .+.+.+..+++...+ -|.+.|+..+.+.++.+..
T Consensus 19 ~~~l~~lv~~l-i~~Gv~gl~v~GtTGE~~~Ls~e-------Er~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 19 VDALKTHAKNL-LEKGIDAIFVNGTTGLGPALSKD-------EKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEETSTTTTGGGSCHH-------HHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHh
Confidence 44444444433 45899999999877532222211 123344444444434 3456676655554443332
Q ss_pred cCCCeeeehHHHHhC-Cc
Q 013784 288 KGAHHVMVGRAAYQN-PW 304 (436)
Q Consensus 288 ~Gad~VmiGRa~l~~-P~ 304 (436)
.|||+||+-...+.. |.
T Consensus 90 ~Gadavlv~~P~y~~~~s 107 (288)
T 2nuw_A 90 MDILGVSSHSPYYFPRLP 107 (288)
T ss_dssp SCCSEEEECCCCSSCSCC
T ss_pred cCCCEEEEcCCcCCCCCC
Confidence 799999999988877 64
No 429
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=84.89 E-value=17 Score=36.38 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=83.1
Q ss_pred EEEEEcCC---CHHHHHHHHHHHHHCCCCEEEecCCCCCCcccc-------CCCccccc-------cCChHHHHHHHHHH
Q 013784 127 IVLQIGGS---NLDNLAKATELANAYNYDEINLNCGCPSPKVAG-------HGCFGVSL-------MLDPKFVGEAMSVI 189 (436)
Q Consensus 127 i~vQL~g~---~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r-------~g~yG~~L-------l~~~~~l~eiv~av 189 (436)
|+.-++.| +.+...+.++.++++|+|.|-...-.|...++. ++.+|..+ .-..+-.. .+...
T Consensus 31 IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~-~L~~~ 109 (385)
T 1vli_A 31 IIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWIL-PLLDY 109 (385)
T ss_dssp EEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHH-HHHHH
T ss_pred EEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHH-HHHHH
Confidence 44545433 457777778888999999999976655432111 11123222 11223333 33344
Q ss_pred hhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcE
Q 013784 190 AANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT 269 (436)
Q Consensus 190 ~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iP 269 (436)
.+..|+++.. .-++ .+ -++ ++++.|+|.+-|-.|+- .++.++..+.+. +.|
T Consensus 110 ~~~~Gi~~~s---tpfD----~~-svd----~l~~~~vd~~KIgS~~~---------------~N~pLL~~va~~--gKP 160 (385)
T 1vli_A 110 CREKQVIFLS---TVCD----EG-SAD----LLQSTSPSAFKIASYEI---------------NHLPLLKYVARL--NRP 160 (385)
T ss_dssp HHHTTCEEEC---BCCS----HH-HHH----HHHTTCCSCEEECGGGT---------------TCHHHHHHHHTT--CSC
T ss_pred HHHcCCcEEE---ccCC----HH-HHH----HHHhcCCCEEEECcccc---------------cCHHHHHHHHhc--CCe
Confidence 4556877632 1122 11 122 34568999999976653 127888777763 899
Q ss_pred EEEeCCCCCHHHHHHHHH----cCCCeeee
Q 013784 270 FTLNGGINTVDEVNAALR----KGAHHVMV 295 (436)
Q Consensus 270 VIanGgI~s~~da~~~l~----~Gad~Vmi 295 (436)
||..=|..+.+++..+.+ .|+.-|.+
T Consensus 161 ViLStGmaTl~Ei~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 161 MIFSTAGAEISDVHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCCcEEE
Confidence 999999999999988876 57755555
No 430
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=84.29 E-value=5.2 Score=39.02 Aligned_cols=123 Identities=14% Similarity=0.133 Sum_probs=77.6
Q ss_pred EEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCC
Q 013784 130 QIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHD 209 (436)
Q Consensus 130 QL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~ 209 (436)
.+...+++.+++.++...+ ||..+-+..|.. . -.+.+++||++++..+.+=.--+|++
T Consensus 129 ~~~~~~~e~~~~~a~~~~~-g~~~~K~Kvg~~---------------~----d~~~v~avR~~~~~~l~vDaN~~~t~-- 186 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECAG-LFNILKVKLGRD---------------N----DKEMIETIRSVTDLPIAVDANQGWKD-- 186 (338)
T ss_dssp BCCCCCHHHHHHHHHHHHT-TCSSEEEECSSS---------------C----HHHHHHHHHTTCCCCEEEECTTCCCC--
T ss_pred EEeCCCHHHHHHHHHHHHh-cccEEEEecCcH---------------H----HHHHHHHHHhhcCCcEEEECcCCCCC--
Confidence 3455689988887776655 898887765421 1 24567788887765554444445531
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcC
Q 013784 210 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKG 289 (436)
Q Consensus 210 ~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~G 289 (436)
..+..++ .+.+++.++.+|- . .+++-+++...++.+.. ++||.+-=.+.+..++.+++ ..
T Consensus 187 -~~~A~~~-~~~l~~~~i~~iE----e------------P~~~~d~~~~~~l~~~~-~ipIa~dE~~~~~~~~~~~~-~a 246 (338)
T 3ijl_A 187 -RQYALDM-IHWLKEKGIVMIE----Q------------PMPKEQLDDIAWVTQQS-PLPVFADESLQRLGDVAALK-GA 246 (338)
T ss_dssp -HHHHHHH-HHHHHHTTEEEEE----C------------CSCTTCHHHHHHHHHTC-SSCEEESTTCCSGGGTGGGB-TT
T ss_pred -HHHHHHH-HHHHhhCCCCEEE----C------------CCCCCcHHHHHHHHhcC-CCCEEECCCCCCHHHHHHHH-hh
Confidence 2333343 4456677776654 1 12333467777777765 89999988888888877765 34
Q ss_pred CCeee
Q 013784 290 AHHVM 294 (436)
Q Consensus 290 ad~Vm 294 (436)
+|.|+
T Consensus 247 ~d~i~ 251 (338)
T 3ijl_A 247 FTGIN 251 (338)
T ss_dssp BSEEE
T ss_pred CCEEE
Confidence 66665
No 431
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=83.95 E-value=5.3 Score=36.28 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=71.9
Q ss_pred EEEEcCCC-HHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCC
Q 013784 128 VLQIGGSN-LDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD 206 (436)
Q Consensus 128 ~vQL~g~~-p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~ 206 (436)
-+.|+|-. ++ -++.+.++|+|.|=+.+--+++. . -.++.+.++.+++.... .+|.| -
T Consensus 3 ~vKICGit~~e----da~~a~~~GaD~iGfif~~~SpR-----~------V~~~~a~~i~~~~~~~~-~~VgV------f 60 (205)
T 1nsj_A 3 RVKICGITNLE----DALFSVESGADAVGFVFYPKSKR-----Y------ISPEDARRISVELPPFV-FRVGV------F 60 (205)
T ss_dssp EEEECCCCSHH----HHHHHHHHTCSEEEEECCTTCTT-----B------CCHHHHHHHHHHSCSSS-EEEEE------E
T ss_pred cEEECCCCcHH----HHHHHHHcCCCEEEEEecCCCCC-----c------CCHHHHHHHHHhCCCCC-CEEEE------E
Confidence 35677754 44 34556678999888886433332 1 35678888877653211 12222 1
Q ss_pred CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH
Q 013784 207 DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL 286 (436)
Q Consensus 207 ~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l 286 (436)
...+.+++. .++++.+.|.|.+||-+. .+++.++.+ ++|||-.=.|.+..++..+.
T Consensus 61 vn~~~~~i~----~~~~~~~ld~vQLHG~e~-----------------~~~~~~l~~---~~~vika~~v~~~~~l~~~~ 116 (205)
T 1nsj_A 61 VNEEPEKIL----DVASYVQLNAVQLHGEEP-----------------IELCRKIAE---RILVIKAVGVSNERDMERAL 116 (205)
T ss_dssp SSCCHHHHH----HHHHHHTCSEEEECSCCC-----------------HHHHHHHHT---TSEEEEEEEESSHHHHHHHG
T ss_pred eCCCHHHHH----HHHHhhCCCEEEECCCCC-----------------HHHHHHHhc---CCCEEEEEEcCCHHHHHHHH
Confidence 223444443 345678999999997432 344444432 46787666677777776655
Q ss_pred HcCCCeeee
Q 013784 287 RKGAHHVMV 295 (436)
Q Consensus 287 ~~Gad~Vmi 295 (436)
...+|++.+
T Consensus 117 ~~~~d~~Ll 125 (205)
T 1nsj_A 117 NYREFPILL 125 (205)
T ss_dssp GGTTSCEEE
T ss_pred HcCCCEEEE
Confidence 544777776
No 432
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=83.78 E-value=4.4 Score=36.35 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=52.0
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcE-EEE
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLT-FTL 272 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iP-VIa 272 (436)
..|+..-++. .+.+++.+.+ +.+.+.|++.|.+.-.+. ...+.+.++.+.+ ++| +|+
T Consensus 6 ~~~i~~~i~~-----~d~~~~~~~~-~~~~~~G~~~i~l~~~~~---------------~~~~~i~~i~~~~-~~~l~vg 63 (212)
T 2v82_A 6 KLPLIAILRG-----ITPDEALAHV-GAVIDAGFDAVEIPLNSP---------------QWEQSIPAIVDAY-GDKALIG 63 (212)
T ss_dssp SSCEEEECTT-----CCHHHHHHHH-HHHHHHTCCEEEEETTST---------------THHHHHHHHHHHH-TTTSEEE
T ss_pred CCCEEEEEeC-----CCHHHHHHHH-HHHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHhC-CCCeEEE
Confidence 3455554443 2234444433 344568999998742210 1145566666554 444 457
Q ss_pred eCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 273 NGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 273 nGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
.|++.+.+++..+++.|||+|.+|.
T Consensus 64 ~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 64 AGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp EECCCSHHHHHHHHHTTCCEEECSS
T ss_pred eccccCHHHHHHHHHcCCCEEEeCC
Confidence 7899999999999999999998764
No 433
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=83.70 E-value=5.8 Score=38.96 Aligned_cols=98 Identities=9% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCCCCcEEEEEc-------CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc
Q 013784 121 SPEQHPIVLQIG-------GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT 193 (436)
Q Consensus 121 ~~~~~pi~vQL~-------g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~ 193 (436)
-..+.|+++=|. |.+.++..+.++.++++|+|.|++..|.-........ +.. .+ .+.++.+++.+
T Consensus 216 vG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~--~~----~~~~~~ir~~~ 287 (349)
T 3hgj_A 216 VPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL--APG--FQ----VPFADAVRKRV 287 (349)
T ss_dssp SCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC--CTT--TT----HHHHHHHHHHH
T ss_pred hcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC--Ccc--cc----HHHHHHHHHHc
Confidence 345788999887 4568889999999999999999998653221110000 100 12 34555666666
Q ss_pred CCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCc
Q 013784 194 NVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRK 236 (436)
Q Consensus 194 ~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt 236 (436)
++||..- -|+. +.++.. +++++..+|.|.+ ||.
T Consensus 288 ~iPVi~~--Ggi~---t~e~a~----~~l~~G~aD~V~i-GR~ 320 (349)
T 3hgj_A 288 GLRTGAV--GLIT---TPEQAE----TLLQAGSADLVLL-GRV 320 (349)
T ss_dssp CCEEEEC--SSCC---CHHHHH----HHHHTTSCSEEEE-STH
T ss_pred CceEEEE--CCCC---CHHHHH----HHHHCCCceEEEe-cHH
Confidence 8887542 1222 233332 2344334887776 453
No 434
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=83.43 E-value=1.3 Score=42.95 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=47.8
Q ss_pred HhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEEeCCCCCHHHHHHHHH----cCC-Ceee
Q 013784 221 VSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTLNGGINTVDEVNAALR----KGA-HHVM 294 (436)
Q Consensus 221 ~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIanGgI~s~~da~~~l~----~Ga-d~Vm 294 (436)
.+.+.|++.|.+.|-|.....++.. .+.+.+..+++.. .++|||+.-|=.+.+++.+..+ .|+ |+||
T Consensus 36 ~li~~Gv~Gl~v~GtTGE~~~Ls~~-------Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davl 108 (311)
T 3h5d_A 36 HLLAHHTDGILLAGTTAESPTLTHD-------EELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGL 108 (311)
T ss_dssp HHHHTTCCCEEESSTTTTGGGSCHH-------HHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEE
T ss_pred HHHHcCCCEEEECccccChhhCCHH-------HHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEE
Confidence 3346999999999877432222211 1233444445443 3689987655555555554432 687 9999
Q ss_pred ehHHHHhCCc
Q 013784 295 VGRAAYQNPW 304 (436)
Q Consensus 295 iGRa~l~~P~ 304 (436)
+-...+..|.
T Consensus 109 v~~P~y~~~s 118 (311)
T 3h5d_A 109 AIVPYYNKPS 118 (311)
T ss_dssp EECCCSSCCC
T ss_pred EcCCCCCCCC
Confidence 9998887775
No 435
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=83.30 E-value=7.8 Score=35.67 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=58.0
Q ss_pred HHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHH
Q 013784 182 VGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYAL 261 (436)
Q Consensus 182 l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l 261 (436)
..++++.+.+ .|+..-+|. .+.++..++++ .+-+.|++.|.+--++. ...+.+.++
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~--~~~~~~~~~~~----al~~gGv~~iel~~k~~---------------~~~~~i~~l 71 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITI--AREEDILPLAD----ALAAGGIRTLEVTLRSQ---------------HGLKAIQVL 71 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECC--SCGGGHHHHHH----HHHHTTCCEEEEESSST---------------HHHHHHHHH
T ss_pred HHHHHHHHHH---CCEEEEEeC--CCHHHHHHHHH----HHHHCCCCEEEEecCCc---------------cHHHHHHHH
Confidence 3445555444 356666665 22233333332 33469999988853221 115567777
Q ss_pred HhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 262 LRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 262 ~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
.+.++++- ++.|-+.+.+++..+++.|||+|.+|
T Consensus 72 ~~~~~~~~-igagtvl~~d~~~~A~~aGAd~v~~p 105 (225)
T 1mxs_A 72 REQRPELC-VGAGTVLDRSMFAAVEAAGAQFVVTP 105 (225)
T ss_dssp HHHCTTSE-EEEECCCSHHHHHHHHHHTCSSEECS
T ss_pred HHhCcccE-EeeCeEeeHHHHHHHHHCCCCEEEeC
Confidence 77776664 56677999999999999999999987
No 436
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=83.19 E-value=9.6 Score=35.03 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=53.5
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC
Q 013784 196 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG 275 (436)
Q Consensus 196 PvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg 275 (436)
|+..-+|. .+.++..+++ +.+-+.|++.|.+--++. ...+.+.++.+.++++ +++.|-
T Consensus 18 ~ii~vir~--~~~~~~~~~~----~al~~gGv~~iel~~k~~---------------~~~~~i~~l~~~~~~l-~vgaGt 75 (224)
T 1vhc_A 18 KIVPVIAL--DNADDILPLA----DTLAKNGLSVAEITFRSE---------------AAADAIRLLRANRPDF-LIAAGT 75 (224)
T ss_dssp CEEEEECC--SSGGGHHHHH----HHHHHTTCCEEEEETTST---------------THHHHHHHHHHHCTTC-EEEEES
T ss_pred CeEEEEeC--CCHHHHHHHH----HHHHHcCCCEEEEeccCc---------------hHHHHHHHHHHhCcCc-EEeeCc
Confidence 56665665 2223333333 233469999988853221 1156677787777665 456667
Q ss_pred CCCHHHHHHHHHcCCCeeeehH
Q 013784 276 INTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 276 I~s~~da~~~l~~Gad~VmiGR 297 (436)
+.+.+++..+++.|||+|..|-
T Consensus 76 vl~~d~~~~A~~aGAd~v~~p~ 97 (224)
T 1vhc_A 76 VLTAEQVVLAKSSGADFVVTPG 97 (224)
T ss_dssp CCSHHHHHHHHHHTCSEEECSS
T ss_pred EeeHHHHHHHHHCCCCEEEECC
Confidence 9999999999999999998873
No 437
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=83.01 E-value=10 Score=36.57 Aligned_cols=120 Identities=9% Similarity=0.130 Sum_probs=74.4
Q ss_pred EEcCCC---CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHH
Q 013784 72 SVAPMM---DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKA 142 (436)
Q Consensus 72 ilAPMa---gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~a 142 (436)
++.|+. .+....++.++. +.|-.|+++.+...--......++ ++...+.. ...|+++.+.+++.++-.+.
T Consensus 16 ~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~l 94 (313)
T 3dz1_A 16 APTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRL 94 (313)
T ss_dssp CCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHH
T ss_pred eeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHH
Confidence 444553 255667777763 344335555443322111111111 12222334 57899999999999999999
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccC--CcEEEEe---ccCCC
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTN--VPVSVKC---RIGVD 206 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~--iPvsvKi---R~G~~ 206 (436)
++.+++.|+|++-+ -.|..+ ...+-+.+-.++|.++++ +||.+=- |.|.+
T Consensus 95 a~~A~~~Gadavlv--~~P~~~------------~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~ 149 (313)
T 3dz1_A 95 ARLSMDAGAAGVMI--APPPSL------------RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVV 149 (313)
T ss_dssp HHHHHHHTCSEEEE--CCCTTC------------CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCC
T ss_pred HHHHHHcCCCEEEE--CCCCCC------------CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcC
Confidence 99999999999877 345421 135668888888888887 9987643 44544
No 438
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=82.93 E-value=5 Score=38.81 Aligned_cols=81 Identities=14% Similarity=0.090 Sum_probs=53.5
Q ss_pred HHHHHHHHCCCCEEEec--------CCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cCCcEEEEeccCCCCCCcH
Q 013784 141 KATELANAYNYDEINLN--------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN--------~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~iPvsvKiR~G~~~~~~~ 211 (436)
-.|++++++|||.|=+. .|.|.. ..-..+.+..-++.|+.. .++||.+=+..|+.+ .
T Consensus 29 ~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~-----------~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~---~ 94 (302)
T 3fa4_A 29 LSARVALSAGFDALYMTGAGTAASVHGQADL-----------GICTLNDMRANAEMISNISPSTPVIADADTGYGG---P 94 (302)
T ss_dssp HHHHHHHTTTCSCEEECHHHHHHHHHSCCSS-----------SCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS---H
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHHcCCCCC-----------CcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC---H
Confidence 46788899999988773 233331 112344555566677665 489999999999643 4
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCc
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRK 236 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt 236 (436)
+++.+.+. .++++|+++|.+-+..
T Consensus 95 ~~v~~tv~-~l~~aGaagv~iEDq~ 118 (302)
T 3fa4_A 95 IMVARTTE-QYSRSGVAAFHIEDQV 118 (302)
T ss_dssp HHHHHHHH-HHHHTTCCEEEECSBC
T ss_pred HHHHHHHH-HHHHcCCcEEEECCCC
Confidence 44555444 4456999999997654
No 439
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=82.71 E-value=1.2 Score=44.30 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=47.9
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccH-HHHHHHHhcCCCcEEEEeCCC---CCHHHHHHHHHcCCCeee
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKY-EYYYALLRDFPDLTFTLNGGI---NTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~-~~v~~l~~~~~~iPVIanGgI---~s~~da~~~l~~Gad~Vm 294 (436)
.+..+..|+|++.+|-....... .+....... .| +.+..+++.. ++|||+=| | .+++++..+.+.|||+|.
T Consensus 161 ~~~ve~~~adal~ihln~~qe~~-~p~Gd~~~~--~~~~~I~~l~~~~-~~PVivK~-vg~g~s~e~A~~l~~aGad~I~ 235 (365)
T 3sr7_A 161 LQAVRDLQPLFLQVHINLMQELL-MPEGEREFR--SWKKHLSDYAKKL-QLPFILKE-VGFGMDVKTIQTAIDLGVKTVD 235 (365)
T ss_dssp HHHHHHHCCSCEEEEECHHHHHT-SSSSCCCCH--HHHHHHHHHHHHC-CSCEEEEE-CSSCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHhcCCCEEEEecccccccc-CCCCCCcHH--HHHHHHHHHHHhh-CCCEEEEE-CCCCCCHHHHHHHHHcCCCEEE
Confidence 34556789999999865421000 000001110 13 5677777765 89999874 6 799999999999999998
Q ss_pred e
Q 013784 295 V 295 (436)
Q Consensus 295 i 295 (436)
+
T Consensus 236 V 236 (365)
T 3sr7_A 236 I 236 (365)
T ss_dssp C
T ss_pred E
Confidence 8
No 440
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=82.70 E-value=4.5 Score=38.71 Aligned_cols=86 Identities=16% Similarity=0.098 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHH---hhccCCcEEEEeccCCCCCCc
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVI---AANTNVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av---~~~~~iPvsvKiR~G~~~~~~ 210 (436)
.+.+...++++++.++|+|+|-..-|-. . |++-+.+.+++.+.++.+ ....+.++.||..-|+.+
T Consensus 169 ~d~e~i~~A~~ia~eaGADfVKTSTGf~--------~-~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt--- 236 (281)
T 2a4a_A 169 KTEDLIIKTTLAVLNGNADFIKTSTGKV--------Q-INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISD--- 236 (281)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEECCCSCS--------S-CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCS---
T ss_pred CcHHHHHHHHHHHHHhCCCEEEeCCCCC--------C-CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCC---
Confidence 3556578999999999999997765432 1 333444555555555433 234477899999999874
Q ss_pred HHHHHHHHHHHhhcCCccEEE
Q 013784 211 YNQLCDFIYKVSSLSPTRHFI 231 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~ 231 (436)
.++..+++....+..|.++++
T Consensus 237 ~e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 237 LNTASHYILLARRFLSSLACH 257 (281)
T ss_dssp HHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHhhhhccccccc
Confidence 455555555455557888766
No 441
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=82.60 E-value=15 Score=37.40 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~ 211 (436)
.+|+.+++.|+.+.+ .||..+-+..|.. +++.-.+.+++||+++ ++++.+=.--+|+ .
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~----~ 249 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF----------------PPADEVAAIKALHKAFPGVPLRLDPNAAWT----V 249 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS----------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC----------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCC----H
Confidence 578998888776654 5999998765421 2344456677777765 4445554444553 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GA 290 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Ga 290 (436)
.+..++ .+.+++. +.+|. +. + .+++...++.+.. ++||.+.-.+.+..++.++++. .+
T Consensus 250 ~~Ai~~-~~~L~~~-l~~iE----eP------------~--~d~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~~~a~ 308 (445)
T 3va8_A 250 ETSKWV-AKELEGI-VEYLE----DP------------A--GEIEGMAAVAKEA-SMPLATNMAVVAFDHLPPSILQDAV 308 (445)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----SC------------B--SHHHHHHHHHTTC-SSCEEESSSCCSGGGHHHHHHTTCC
T ss_pred HHHHHH-HHHHhhh-cCeEe----ec------------C--cCHHHHHHHHHcC-CCCEEeCCccCCHHHHHHHHHcCCC
Confidence 344443 4455655 55544 10 1 1366666776664 8999998889999999999985 47
Q ss_pred Ceeee
Q 013784 291 HHVMV 295 (436)
Q Consensus 291 d~Vmi 295 (436)
|.|++
T Consensus 309 div~~ 313 (445)
T 3va8_A 309 QVILS 313 (445)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 87775
No 442
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=82.53 E-value=4.4 Score=37.19 Aligned_cols=137 Identities=10% Similarity=0.119 Sum_probs=76.0
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccc---cccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGV---SLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~---~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
.-++++|.+.-....+.++.+.++++||++||+...-|... .|.+ .....++.+.++.+.+.+ .|+.++.-
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~ 82 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG-----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGT 82 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG-----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc-----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEE
Confidence 34578887765444577888899999999999987544211 0111 111345566666665543 46665543
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE---eC-CC
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL---NG-GI 276 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa---nG-gI 276 (436)
....-...+.+... .+.+...|++.|++|... ..|..+.+..++. ++.+.. .+ -+
T Consensus 83 ~~~~~~~~~~~~~~----i~~A~~lGa~~v~~~~~~----------------~~~~~l~~~a~~~-gv~l~~En~~~~~~ 141 (262)
T 3p6l_A 83 GVYVAEKSSDWEKM----FKFAKAMDLEFITCEPAL----------------SDWDLVEKLSKQY-NIKISVHNHPQPSD 141 (262)
T ss_dssp EEECCSSTTHHHHH----HHHHHHTTCSEEEECCCG----------------GGHHHHHHHHHHH-TCEEEEECCSSSSS
T ss_pred eccCCccHHHHHHH----HHHHHHcCCCEEEecCCH----------------HHHHHHHHHHHHh-CCEEEEEeCCCccc
Confidence 32211112223332 334567899999998521 1155555555443 343321 11 12
Q ss_pred -CCHHHHHHHHH
Q 013784 277 -NTVDEVNAALR 287 (436)
Q Consensus 277 -~s~~da~~~l~ 287 (436)
.+++++.++++
T Consensus 142 ~~~~~~~~~ll~ 153 (262)
T 3p6l_A 142 YWKPENLLKAIS 153 (262)
T ss_dssp SSSHHHHHHHHT
T ss_pred cCCHHHHHHHHH
Confidence 47788888876
No 443
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=82.38 E-value=4.7 Score=38.05 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=51.5
Q ss_pred HHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeehHH
Q 013784 219 YKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa 298 (436)
++..+ +|+++|.|-.=..+.+|. ++++.++.+. .++||+--==|-|+-++.++...|||+|.+=-+
T Consensus 70 A~~~~-~GA~aiSVLTd~~~F~Gs------------~~~L~~vr~~-v~lPvLrKDFiid~yQI~eAr~~GADaILLI~a 135 (258)
T 4a29_A 70 AKFME-RYAVGLSITTEEKYFNGS------------YETLRKIASS-VSIPILMSDFIVKESQIDDAYNLGADTVLLIVK 135 (258)
T ss_dssp HHHHT-TTCSEEEEECCSTTTCCC------------HHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHHHTCSEEEEEGG
T ss_pred HHHHh-CCCeEEEEeCCCCCCCCC------------HHHHHHHHHh-cCCCEeeccccccHHHHHHHHHcCCCeeehHHh
Confidence 44444 899999986433433442 6777776665 499999888899999999999999999976444
Q ss_pred HHhC
Q 013784 299 AYQN 302 (436)
Q Consensus 299 ~l~~ 302 (436)
+|.+
T Consensus 136 ~L~~ 139 (258)
T 4a29_A 136 ILTE 139 (258)
T ss_dssp GSCH
T ss_pred hcCH
Confidence 4443
No 444
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.95 E-value=0.5 Score=45.74 Aligned_cols=86 Identities=10% Similarity=0.018 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcC-CCcEEEE-eCCCCCHHHHHHHH--
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDF-PDLTFTL-NGGINTVDEVNAAL-- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~-~~iPVIa-nGgI~s~~da~~~l-- 286 (436)
++.+.+.+.. +.+.|+|.|.+.|-|.....++..+ +.+.+..+++.. .++|||+ .|+..+.+.++.+.
T Consensus 24 ~~~l~~lv~~-li~~Gv~gl~v~GttGE~~~Ls~~E-------r~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 95 (300)
T 3eb2_A 24 ADVMGRLCDD-LIQAGVHGLTPLGSTGEFAYLGTAQ-------REAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLY 95 (300)
T ss_dssp HHHHHHHHHH-HHHTTCSCBBTTSGGGTGGGCCHHH-------HHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCCEEEECccccCccccCHHH-------HHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHH
Confidence 4444444443 3459999999988775322222211 133444444432 3688874 45554444443332
Q ss_pred -HcCCCeeeehHHHHhCCc
Q 013784 287 -RKGAHHVMVGRAAYQNPW 304 (436)
Q Consensus 287 -~~Gad~VmiGRa~l~~P~ 304 (436)
+.|||+||+-...+..|.
T Consensus 96 ~~~Gadavlv~~P~y~~~~ 114 (300)
T 3eb2_A 96 EKLGADGILAILEAYFPLK 114 (300)
T ss_dssp HHHTCSEEEEEECCSSCCC
T ss_pred HHcCCCEEEEcCCCCCCCC
Confidence 379999999998887775
No 445
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=81.76 E-value=41 Score=32.86 Aligned_cols=193 Identities=10% Similarity=0.045 Sum_probs=107.3
Q ss_pred CChHHHHHHHH---HcCCCcEEEeccccchhhhhcccchhhhhc-cCCCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEE
Q 013784 79 WTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGNLDRFLA-FSPEQHPIVLQIGGSNLDNLAKATELANAYNYDEI 154 (436)
Q Consensus 79 vtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~~~~~~~-~~~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~I 154 (436)
+....++.++. ..|-.|+++.+...--..+...+ ..++++ ......|+++++.+++.++..+.++.+++.|+|++
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eE-r~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadav 122 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQ-RMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGL 122 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHH-HHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHH-HHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 55566777763 34434666554322111111111 112222 12246799999999999999999999999999998
Q ss_pred EecCCCCCCccccCCCccccccCChHHHHHHHHHHhh-ccCCcEEEEe--ccCCCCCCcHHHHHHHHHHH-hhcCCccEE
Q 013784 155 NLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAA-NTNVPVSVKC--RIGVDDHDSYNQLCDFIYKV-SSLSPTRHF 230 (436)
Q Consensus 155 dLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~-~~~iPvsvKi--R~G~~~~~~~~~~~~~la~~-~e~~Gvd~I 230 (436)
-+- .|.-. + + ...+-+.+-.++|.+ ++++||.+=- |.|.+- +.+.+. ++ .+.-.+-+|
T Consensus 123 lv~--~P~y~--~----~----~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l--~~e~~~----~L~a~~pnIvGi 184 (344)
T 2hmc_A 123 MVI--PRVLS--R----G----SVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFAT--RADLFF----ALRAEHKNLVGF 184 (344)
T ss_dssp EEC--CCCSS--S----T----TCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCC--CHHHHH----HHHHHCTTEEEE
T ss_pred EEC--CCccC--C----C----CCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCc--CHHHHH----HHHhcCCCEEEE
Confidence 775 34421 0 0 134667888888888 8899987643 334432 233332 33 332223333
Q ss_pred EEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHH-HcCCCeeeehHHHHhCCcchhh
Q 013784 231 IIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAAL-RKGAHHVMVGRAAYQNPWYTLG 308 (436)
Q Consensus 231 ~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l-~~Gad~VmiGRa~l~~P~lf~~ 308 (436)
--.. +|.++..+.++++... ++. +.+|+= +.+...+ ..|++|++.|.+-+ -|.++.+
T Consensus 185 Kdss----------------gp~d~~~~~~~~~~~~~~f~-v~~G~D---~~~l~~l~~~Ga~G~is~~anv-~P~~~~~ 243 (344)
T 2hmc_A 185 KEFG----------------GPADMRYAAENITSRDDEVT-LMIGVD---TAVVHGFVNCGATGAITGIGNV-LPKEVIH 243 (344)
T ss_dssp EECS----------------CHHHHHHHHHHTSCSSSSCE-EEECSG---GGHHHHHHHSCCCEEEESGGGT-SHHHHHH
T ss_pred EcCC----------------CCCCHHHHHHHHHHcCCCEE-EEECcH---HHHHHHHHHcCCCEEEeCHHHh-hHHHHHH
Confidence 2211 1001444555554332 343 455542 3355667 78999999998875 3666544
Q ss_pred hhh
Q 013784 309 HVD 311 (436)
Q Consensus 309 ~~~ 311 (436)
..+
T Consensus 244 l~~ 246 (344)
T 2hmc_A 244 LCK 246 (344)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 446
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=81.73 E-value=10 Score=38.82 Aligned_cols=123 Identities=15% Similarity=0.075 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~ 211 (436)
.+++.+++.|+.+.+ .||..+-+..|.+ +++.-.+.+++||+++ ++.+.+=.--+|+ .
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~ 258 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVM----------------PGAEEMEAIAAIKARFPHARVTLDPNGAWS----L 258 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBC----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCC----------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCC----H
Confidence 578888888876655 6999998876532 1222345667777764 3334333333342 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCcc----HHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK----YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 287 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~----~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~ 287 (436)
.+..++ .+.+++. +.+|- + .+++.+ ++.+.++.+.. ++||.+.=-+.+..++.++++
T Consensus 259 ~~Ai~~-~~~Le~~-l~~iE----e------------P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~ 319 (470)
T 3p0w_A 259 NEAIAL-CKGQGHL-VAYAE----D------------PCGPEAGYSGREVMAEFKRAT-GIPTATNMIATDWRQMGHAVQ 319 (470)
T ss_dssp HHHHHH-HTTCTTT-CSEEE----S------------CBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSCSHHHHHHHHH
T ss_pred HHHHHH-HHhcccc-ceeec----C------------CCChhhccchHHHHHHHHhcC-CCCEEeCCccCCHHHHHHHHH
Confidence 344332 3444544 44433 1 112222 45566666654 799888656778899999998
Q ss_pred cC-CCeeee
Q 013784 288 KG-AHHVMV 295 (436)
Q Consensus 288 ~G-ad~Vmi 295 (436)
.| +|.+++
T Consensus 320 ~~a~div~~ 328 (470)
T 3p0w_A 320 LHAVDIPLA 328 (470)
T ss_dssp TTCCSEEBC
T ss_pred cCCCCEEEe
Confidence 55 676654
No 447
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=81.61 E-value=18 Score=36.79 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=78.5
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~ 211 (436)
.+|+.+++.|+.+.+ .||..+-+..|. .+++.-.+.+++||+++ ++++.+=.--+|+ .
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~----------------~~~~~Di~~v~avRea~~d~~L~vDaN~~w~----~ 251 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGV----------------FAPEEEMAAVEALRAAFPDHPLRLDPNAAWT----P 251 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSS----------------SCHHHHHHHHHHHHHHCTTSCEEEECTTCSC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCC----------------CCHHHHHHHHHHHHHhCCCCcEEEECCCCCC----H
Confidence 578998888876654 699998876542 13344456677777765 4455554444554 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GA 290 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Ga 290 (436)
.+..++ .+.+++. +.+|- +. ++ +++...++.+.. ++||.+.--+.+..++.++++. .+
T Consensus 252 ~~Ai~~-~~~L~~~-l~~iE----eP------------~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~ 310 (445)
T 3vdg_A 252 QTSVKV-AAGLEGV-LEYLE----DP------------TP--GLDGMAEVAAQA-PMPLATNMCVVAFDQLPAAVAKNSV 310 (445)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----CC------------SS--SHHHHHHHHHHC-SSCEEESSSCCSGGGHHHHHHHTCC
T ss_pred HHHHHH-HHHHhhH-HHeee----CC------------CC--CHHHHHHHHhcC-CCCEEcCCcCCCHHHHHHHHHcCCC
Confidence 344443 4455656 65554 11 11 366667777765 8999998889999999999984 47
Q ss_pred Ceeee
Q 013784 291 HHVMV 295 (436)
Q Consensus 291 d~Vmi 295 (436)
|.|++
T Consensus 311 div~~ 315 (445)
T 3vdg_A 311 QVVLS 315 (445)
T ss_dssp SEEEE
T ss_pred CEEee
Confidence 87775
No 448
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=81.54 E-value=2 Score=41.11 Aligned_cols=70 Identities=6% Similarity=-0.024 Sum_probs=46.6
Q ss_pred HHHhhcCCccEEEEcc-Cc---ccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeee
Q 013784 219 YKVSSLSPTRHFIIHS-RK---ALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhg-rt---~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vm 294 (436)
++.++++|++.|.+-. -. ...+|... ....+.+.++.+.+ ++|++.+.++.+.++++.+++.|||+|
T Consensus 34 a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~-------~~~~~~i~~i~~~~-~~Pvi~~~~~~~~~~~~~~~~aGad~v- 104 (297)
T 2zbt_A 34 AVIAEEAGAVAVMALERVPADIRAQGGVAR-------MSDPKIIKEIMAAV-SIPVMAKVRIGHFVEAMILEAIGVDFI- 104 (297)
T ss_dssp HHHHHHHTCSEEEECSSCHHHHHHTTCCCC-------CCCHHHHHHHHTTC-SSCEEEEEETTCHHHHHHHHHTTCSEE-
T ss_pred HHHHHHCCCcEEEeccccchHHHhhcCCcc-------CCCHHHHHHHHHhc-CCCeEEEeccCCHHHHHHHHHCCCCEE-
Confidence 3345678999987621 00 11122111 11266777777665 899999988889999999999999999
Q ss_pred ehH
Q 013784 295 VGR 297 (436)
Q Consensus 295 iGR 297 (436)
.|.
T Consensus 105 ~~~ 107 (297)
T 2zbt_A 105 DES 107 (297)
T ss_dssp EEE
T ss_pred eee
Confidence 443
No 449
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=81.31 E-value=32 Score=32.24 Aligned_cols=136 Identities=12% Similarity=0.112 Sum_probs=82.2
Q ss_pred cEEEEEcC--CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 126 PIVLQIGG--SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 126 pi~vQL~g--~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+++++=-+ .+.+...+.++.++++|+|.|-...--|..... .|-+ + . +.-.+++..+.+..|+|+..-+
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~---~~~g-~-~--~egl~~l~~~~~~~Gl~~~te~-- 94 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPY---SFQG-Y-G--EKALRWMREAADEYGLVTVTEV-- 94 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTT---SCCC-C-T--HHHHHHHHHHHHHHTCEEEEEC--
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcc---cccC-c-c--HHHHHHHHHHHHHcCCcEEEee--
Confidence 55544222 357888888999999999998877655543211 1111 1 1 3333445555567799875421
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC-CHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEV 282 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~-s~~da 282 (436)
++ ..+. ++ +++. +|.+.|-+|+.. ++.++.++.+ .+.||+..-|.. +.+++
T Consensus 95 -~d-~~~~----~~----l~~~-vd~~kIga~~~~---------------n~~ll~~~a~--~~kPV~lk~G~~~t~~e~ 146 (262)
T 1zco_A 95 -MD-TRHV----EL----VAKY-SDILQIGARNSQ---------------NFELLKEVGK--VENPVLLKRGMGNTIQEL 146 (262)
T ss_dssp -CC-GGGH----HH----HHHH-CSEEEECGGGTT---------------CHHHHHHHTT--SSSCEEEECCTTCCHHHH
T ss_pred -CC-HHhH----HH----HHhh-CCEEEECccccc---------------CHHHHHHHHh--cCCcEEEecCCCCCHHHH
Confidence 22 1222 22 2345 899999877641 1566666665 389999988887 99999
Q ss_pred HHHHH----cCC-CeeeehHH
Q 013784 283 NAALR----KGA-HHVMVGRA 298 (436)
Q Consensus 283 ~~~l~----~Ga-d~VmiGRa 298 (436)
..+.+ .|. +.+.+=||
T Consensus 147 ~~Av~~i~~~Gn~~i~L~~RG 167 (262)
T 1zco_A 147 LYSAEYIMAQGNENVILCERG 167 (262)
T ss_dssp HHHHHHHHTTTCCCEEEEECC
T ss_pred HHHHHHHHHCCCCeEEEEECC
Confidence 88885 455 34444444
No 450
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=81.20 E-value=35 Score=32.61 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=68.5
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEec-c-CCCCC--------CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCC
Q 013784 177 LDPKFVGEAMSVIAANTNVPVSVKCR-I-GVDDH--------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAE 246 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~~iPvsvKiR-~-G~~~~--------~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~ 246 (436)
.+.+...++++...+ .|+.|-.-+- + |-++. .+.++..+ ..++.|+|.+.+.=.|.. |.-+ .
T Consensus 118 eNi~~Tk~vv~~ah~-~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~----Fv~~TgvD~LAvaiGt~H--G~Y~-~ 189 (288)
T 3q94_A 118 ENVETTKKVVEYAHA-RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKH----LVEATGIDCLAPALGSVH--GPYK-G 189 (288)
T ss_dssp HHHHHHHHHHHHHHT-TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHH----HHHHHCCSEEEECSSCBS--SCCS-S
T ss_pred HHHHHHHHHHHHHHH-cCCeEEEEeeeeccccCCcCCccccCCCHHHHHH----HHHHHCCCEEEEEcCccc--CCcC-C
Confidence 445555666655433 3555544332 2 22221 12344444 446789999987533331 2111 0
Q ss_pred CCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH-HHHHHHHHcCCCeeeehHHHH
Q 013784 247 NRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV-DEVNAALRKGAHHVMVGRAAY 300 (436)
Q Consensus 247 ~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~-~da~~~l~~Gad~VmiGRa~l 300 (436)
-+.++++.+.++.+.. ++|++.-||=..+ ++++++++.|+.=|=|++.+.
T Consensus 190 ---~p~Ld~~~L~~I~~~v-~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 190 ---EPNLGFAEMEQVRDFT-GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQ 240 (288)
T ss_dssp ---SCCCCHHHHHHHHHHH-CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHH
T ss_pred ---CCccCHHHHHHHHHhc-CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHH
Confidence 1456788888887765 7999998876655 668888899999999888764
No 451
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=80.77 E-value=1.8 Score=43.27 Aligned_cols=43 Identities=14% Similarity=0.314 Sum_probs=36.7
Q ss_pred CccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeeeh
Q 013784 252 PLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 252 ~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~VmiG 296 (436)
...|+.+..+++.. ++||+.- ||.+++++..+.+.|||+|.++
T Consensus 211 ~~~~~~i~~i~~~~-~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 211 SFNWEALRWLRDLW-PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp TCCHHHHHHHHHHC-CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred cccHHHHHHHHHhc-CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 34588888888876 8999976 4899999999999999999993
No 452
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=80.60 E-value=11 Score=35.61 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=73.7
Q ss_pred CCCCChH--H--HHHHHHH-cCCCcEEEeccccchhhhhccc-chhhhh-ccCCCCCcEEEEEcCCCHHHHHHHHHHHHH
Q 013784 76 MMDWTDN--H--YRTLARL-ISKHAWLYTEMLAAETIIYQQG-NLDRFL-AFSPEQHPIVLQIGGSNLDNLAKATELANA 148 (436)
Q Consensus 76 Magvtd~--~--fr~~~~~-~Gg~gl~~temv~~~~l~~~~~-~~~~~~-~~~~~~~pi~vQL~g~~p~~~~~aA~~~~~ 148 (436)
-+|..+. + ..+++|+ .+|..++=-|.++.+.+...+. .+.+.. .+. .+.-.++=....++ ..|+.+++
T Consensus 80 Tag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~-~~Gf~Vlpy~~dd~----~~akrl~~ 154 (265)
T 1wv2_A 80 TAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLV-KDGFDVMVYTSDDP----IIARQLAE 154 (265)
T ss_dssp CTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHH-TTTCEEEEEECSCH----HHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHH-HCCCEEEEEeCCCH----HHHHHHHH
Confidence 3555443 2 3455688 8888999999988775543221 111111 112 23323333455666 46778889
Q ss_pred CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCcc
Q 013784 149 YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTR 228 (436)
Q Consensus 149 ~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd 228 (436)
+|.+.| .-.|.|... |..+ .+++++..+ ++..++||.+ --|+.. .+++. +.+ +.|+|
T Consensus 155 ~G~~aV-mPlg~pIGs-------G~Gi-~~~~lI~~I----~e~~~vPVI~--eGGI~T---PsDAa----~Am-eLGAd 211 (265)
T 1wv2_A 155 IGCIAV-MPLAGLIGS-------GLGI-CNPYNLRII----LEEAKVPVLV--DAGVGT---ASDAA----IAM-ELGCE 211 (265)
T ss_dssp SCCSEE-EECSSSTTC-------CCCC-SCHHHHHHH----HHHCSSCBEE--ESCCCS---HHHHH----HHH-HHTCS
T ss_pred hCCCEE-EeCCccCCC-------CCCc-CCHHHHHHH----HhcCCCCEEE--eCCCCC---HHHHH----HHH-HcCCC
Confidence 999999 445666432 2222 456666444 4456889877 344433 33332 233 47999
Q ss_pred EEEEc
Q 013784 229 HFIIH 233 (436)
Q Consensus 229 ~I~vh 233 (436)
++.|-
T Consensus 212 gVlVg 216 (265)
T 1wv2_A 212 AVLMN 216 (265)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99884
No 453
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=80.40 E-value=14 Score=37.61 Aligned_cols=123 Identities=7% Similarity=0.016 Sum_probs=72.8
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~ 211 (436)
.+|+.+++.|+.+.+ .||..+-+..|.+ +++.-.+.+++||+++ ++.+.+=.--+|+ .
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~----~ 240 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVL----------------RGEEEADCIRALHEAFPEARLALDPNGAWK----L 240 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS----------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBC----H
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCC----------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCC----H
Confidence 478888888876654 6999998876532 2233345667777764 3334333333443 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCcc----HHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLK----YEYYYALLRDFPDLTFTLNGGINTVDEVNAALR 287 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~----~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~ 287 (436)
.+..++ .+.+++. +.+|- + .+++.+ ++.+.++.+.. ++||.+.=-+.+..++.++++
T Consensus 241 ~~A~~~-~~~L~~~-i~~iE----e------------P~~~~d~~~~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~i~ 301 (450)
T 3mzn_A 241 DEAVRV-LEPIKHL-LSYAE----D------------PCGQEGGFSGRETMAEFKKRT-GLPTATNMIATDYKQLQYAVQ 301 (450)
T ss_dssp HHHHHH-HGGGGGG-CSEEE----S------------SBCCBTTBCHHHHHHHHHHHH-CCCEEESSSSSSHHHHHHHHH
T ss_pred HHHHHH-HHHhhhc-cceee----C------------CCCcccccchHHHHHHHHHhc-CCCEEeCCccCCHHHHHHHHH
Confidence 344443 4455554 54443 1 112222 45556666654 799877556778899999998
Q ss_pred cC-CCeeee
Q 013784 288 KG-AHHVMV 295 (436)
Q Consensus 288 ~G-ad~Vmi 295 (436)
.| +|.+++
T Consensus 302 ~~a~di~~~ 310 (450)
T 3mzn_A 302 LNSVDIPLA 310 (450)
T ss_dssp HTCCSEEBC
T ss_pred cCCCCEEEe
Confidence 54 676654
No 454
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=80.33 E-value=43 Score=32.17 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=91.5
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++.+.+ +.++-.+.++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=-
T Consensus 79 ~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~--~P~y~-------~----~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 79 NGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIH--QPVHP-------Y----ITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp TTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEEC--CCCCS-------C----CCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEEC--CCCCC-------C----CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 356799999999 98888899999999999998765 44421 1 2345677888888888899987755
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC---CcEEEEeCCCCC
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP---DLTFTLNGGINT 278 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~---~iPVIanGgI~s 278 (436)
|.|. - +.+.+ .++++.-.+-+|--.. | ++..+.++++..+ ++. +.+|+
T Consensus 145 ~tg~-l--~~~~~----~~La~~pnIvgiKdss------g------------d~~~~~~~~~~~~~~~~f~-v~~G~--- 195 (314)
T 3d0c_A 145 KDAH-L--SDDVI----KELAPLDKLVGIKYAI------N------------DIQRVTQVMRAVPKSSNVA-FICGT--- 195 (314)
T ss_dssp CCTT-S--CTHHH----HHHTTCTTEEEEEECC------C------------CHHHHHHHHHHSCGGGCCE-EEETT---
T ss_pred CCCC-c--CHHHH----HHHHcCCCEEEEEeCC------C------------CHHHHHHHHHhcCCCCCEE-EEEeC---
Confidence 7776 3 22222 3333322232332111 1 1445555655442 333 46774
Q ss_pred HH-HHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 279 VD-EVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 279 ~~-da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
-+ .+...+..|++|+..|.+-+ -|..+.+-.+
T Consensus 196 d~~~~~~~l~~G~~G~is~~an~-~P~~~~~l~~ 228 (314)
T 3d0c_A 196 AEKWAPFFYHAGAVGFTSGLVNV-FPQKSFALLE 228 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESGGGT-CHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCEEEecHHHh-hHHHHHHHHH
Confidence 23 46667778999999998764 4655443333
No 455
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=80.21 E-value=9.4 Score=34.19 Aligned_cols=129 Identities=12% Similarity=0.151 Sum_probs=71.0
Q ss_pred EEEEEcCCCHHHHHHHHHHHHHCCCCEEEecC--CC-CCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc
Q 013784 127 IVLQIGGSNLDNLAKATELANAYNYDEINLNC--GC-PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI 203 (436)
Q Consensus 127 i~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~--gc-P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~ 203 (436)
+..-|...|+..+.+.++.+.+.|+|.+.+-. |. +. .. .+| .++++++++.++.|+.+-.-
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~-~~----~~g----------~~~i~~i~~~~~~~~~v~l~- 69 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP-NI----SFG----------ADVVASMRKHSKLVFDCHLM- 69 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS-CB----CBC----------HHHHHHHHTTCCSEEEEEEE-
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC-cc----ccC----------HHHHHHHHHhCCCCEEEEEe-
Confidence 45556677888888999999999999866553 43 21 11 112 34555666666667655332
Q ss_pred CCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHH
Q 013784 204 GVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVN 283 (436)
Q Consensus 204 G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~ 283 (436)
+.+.... + +.+.++|+|.+++|+-.. . . ....+..+. .. +..++..=+..+..+..
T Consensus 70 -v~d~~~~------i-~~~~~~gad~v~vh~~~~------~-------~-~~~~~~~~~-~~-g~~i~~~~~~~t~~e~~ 125 (220)
T 2fli_A 70 -VVDPERY------V-EAFAQAGADIMTIHTEST------R-------H-IHGALQKIK-AA-GMKAGVVINPGTPATAL 125 (220)
T ss_dssp -SSSGGGG------H-HHHHHHTCSEEEEEGGGC------S-------C-HHHHHHHHH-HT-TSEEEEEECTTSCGGGG
T ss_pred -ecCHHHH------H-HHHHHcCCCEEEEccCcc------c-------c-HHHHHHHHH-Hc-CCcEEEEEcCCCCHHHH
Confidence 2232221 1 223458999999997431 0 0 023333333 33 45554443444544444
Q ss_pred HHHHcCCCeeee
Q 013784 284 AALRKGAHHVMV 295 (436)
Q Consensus 284 ~~l~~Gad~Vmi 295 (436)
+.+..++|.|.+
T Consensus 126 ~~~~~~~d~vl~ 137 (220)
T 2fli_A 126 EPLLDLVDQVLI 137 (220)
T ss_dssp GGGTTTCSEEEE
T ss_pred HHHHhhCCEEEE
Confidence 444456888854
No 456
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=80.21 E-value=4.2 Score=42.28 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=34.6
Q ss_pred ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee
Q 013784 253 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 253 ~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi 295 (436)
..|+.+..+++.. ++||+.- ||.+.+++..+.+.|||+|.+
T Consensus 330 ~~~~~i~~lr~~~-~~PvivK-gv~~~e~A~~a~~aGad~I~v 370 (511)
T 1kbi_A 330 LTWKDIEELKKKT-KLPIVIK-GVQRTEDVIKAAEIGVSGVVL 370 (511)
T ss_dssp CCHHHHHHHHHHC-SSCEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHHHHh-CCcEEEE-eCCCHHHHHHHHHcCCCEEEE
Confidence 4588888887765 8999977 467899999999999999999
No 457
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=80.11 E-value=15 Score=35.53 Aligned_cols=81 Identities=10% Similarity=0.060 Sum_probs=54.0
Q ss_pred HHHHHHHHCCCCEEEec--------CCCCCCccccCCCccccccCChHHHHHHHHHHhhcc--CCcEEEEeccCCCCCCc
Q 013784 141 KATELANAYNYDEINLN--------CGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT--NVPVSVKCRIGVDDHDS 210 (436)
Q Consensus 141 ~aA~~~~~~G~d~IdLN--------~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~--~iPvsvKiR~G~~~~~~ 210 (436)
-.|++++++|||.|=+. .|.|.. .+-..+.+.+-++.|+... ++||.+=+..|+.+
T Consensus 36 ~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~-----------~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~--- 101 (307)
T 3lye_A 36 LSARTAMELGFKSLYMTGAGTTASRLGQPDL-----------AIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGG--- 101 (307)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHCCCSS-----------SCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS---
T ss_pred HHHHHHHHcCCCEEEeccHHHHHHhcCCCCC-----------CCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCC---
Confidence 46788899999988773 233331 1233455666677777654 59999999998643
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCc
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRK 236 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt 236 (436)
.+++.+.+. .++++|+++|.+-+..
T Consensus 102 ~~~v~~~v~-~l~~aGaagv~iEDq~ 126 (307)
T 3lye_A 102 PIMVARTVE-HYIRSGVAGAHLEDQI 126 (307)
T ss_dssp HHHHHHHHH-HHHHTTCCEEEECCBC
T ss_pred HHHHHHHHH-HHHHcCCeEEEEcCCC
Confidence 445555444 4456999999997654
No 458
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=79.99 E-value=29 Score=33.55 Aligned_cols=139 Identities=14% Similarity=0.270 Sum_probs=73.2
Q ss_pred CCcEEEEEc-CCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 124 QHPIVLQIG-GSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 124 ~~pi~vQL~-g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
.-|++++|= |.+.+...+ +.++||+-|-+..+.- .+..+.+...++++...+ .|+.|-.-+-
T Consensus 74 ~VPValHLDHg~~~e~~~~----ai~~GFtSVMiDgS~~------------p~eeNi~~Tk~vv~~ah~-~gvsVEaELG 136 (307)
T 3n9r_A 74 HIPVALHLDHGTTFESCEK----AVKAGFTSVMIDASHH------------AFEENLELTSKVVKMAHN-AGVSVEAELG 136 (307)
T ss_dssp TSCEEEEEEEECSHHHHHH----HHHHTCSEEEECCTTS------------CHHHHHHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCcEEEECCCCCCHHHHHH----HHHhCCCcEEEECCCC------------CHHHHHHHHHHHHHHHHH-cCCeEEEEee
Confidence 456666664 334433322 2345666555442210 122455566666665543 3555444332
Q ss_pred -c-CCCCC----------CcHHHHHHHHHHHhhcCCccEEEEccCcc--cccCCCCCCCCCCCCccHHHHHHHHhcCCCc
Q 013784 203 -I-GVDDH----------DSYNQLCDFIYKVSSLSPTRHFIIHSRKA--LLNGISPAENRTIPPLKYEYYYALLRDFPDL 268 (436)
Q Consensus 203 -~-G~~~~----------~~~~~~~~~la~~~e~~Gvd~I~vhgrt~--~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~i 268 (436)
+ |.++. .+.++..+| .++.|+|.|.+.=.|. .|++.. -+.++++.+.++.+ .+++
T Consensus 137 ~igG~Ed~~~~~~~~~~yT~Peea~~F----v~~TgvD~LAvaiGt~HG~Yk~~~------~p~Ld~~~L~~I~~-~~~~ 205 (307)
T 3n9r_A 137 RLMGIEDNISVDEKDAVLVNPKEAEQF----VKESQVDYLAPAIGTSHGAFKFKG------EPKLDFERLQEVKR-LTNI 205 (307)
T ss_dssp CCCCC----------CCSCCHHHHHHH----HHHHCCSEEEECSSCCSSSBCCSS------SCCCCHHHHHHHHH-HHCS
T ss_pred eeccccCCcccccccccCCCHHHHHHH----HHHHCCCEEEEecCCcccccCCCC------CCccCHHHHHHHHh-cCCC
Confidence 1 22111 123444444 4568999998753332 111111 14567888888844 3589
Q ss_pred EEEEeCCCCCHHHHHHHHH-cCC
Q 013784 269 TFTLNGGINTVDEVNAALR-KGA 290 (436)
Q Consensus 269 PVIanGgI~s~~da~~~l~-~Ga 290 (436)
|++.-||=.-+++..+.+. +|-
T Consensus 206 PLVlHGgS~vp~~~~~~~~~~gg 228 (307)
T 3n9r_A 206 PLVLHGASAIPDNVRKSYLDAGG 228 (307)
T ss_dssp CEEESSCCCCCHHHHHHHHHTTC
T ss_pred CeEEeCCCCcchHHHHHHHHhcC
Confidence 9999998867777777665 543
No 459
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=79.92 E-value=30 Score=32.35 Aligned_cols=96 Identities=10% Similarity=0.019 Sum_probs=66.8
Q ss_pred CcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEecc
Q 013784 125 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRI 203 (436)
Q Consensus 125 ~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~ 203 (436)
..+++-|.+.+.+++...++.+.+.|+|.||+=.-+=. +. .+.+.+.+.+..+++.. ++|+.+=+|.
T Consensus 20 p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~------~~------~~~~~v~~~l~~lr~~~~~~PiI~T~Rt 87 (257)
T 2yr1_A 20 PCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFR------AI------DDQERVLATANGLRNIAGEIPILFTIRS 87 (257)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCT------TT------TCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred cEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeeccc------cc------CcHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 34889999999999887788778889999999653211 11 34677888999998877 7898887886
Q ss_pred CCCC----CCcHHHHHHHHHHHhhcCC-ccEEEEc
Q 013784 204 GVDD----HDSYNQLCDFIYKVSSLSP-TRHFIIH 233 (436)
Q Consensus 204 G~~~----~~~~~~~~~~la~~~e~~G-vd~I~vh 233 (436)
-++. ..+.++-.+.+..+++ .| +|+|.|-
T Consensus 88 ~~eGG~~~~~~~~~~~~ll~~~~~-~g~~d~iDvE 121 (257)
T 2yr1_A 88 EREGGQPIPLNEAEVRRLIEAICR-SGAIDLVDYE 121 (257)
T ss_dssp TTTTCCCCSSCHHHHHHHHHHHHH-HTCCSEEEEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHH-cCCCCEEEEE
Confidence 4431 1223333444444444 56 9999985
No 460
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=79.86 E-value=2.5 Score=41.71 Aligned_cols=84 Identities=11% Similarity=0.048 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHH----
Q 013784 211 YNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAAL---- 286 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l---- 286 (436)
.+.+.+.+..+ .+.|+|.|.+.|-|.....++..+ +.+.+.. ... .++|||+.-|=.+.+++.+..
T Consensus 46 ~~~l~~lv~~l-i~~Gv~Gl~v~GtTGE~~~Ls~eE-------r~~vi~~-~~~-grvpViaGvg~~st~eai~la~~A~ 115 (344)
T 2hmc_A 46 FDALVRKGKEL-IADGMSAVVYCGSMGDWPLLTDEQ-------RMEGVER-LVK-AGIPVIVGTGAVNTASAVAHAVHAQ 115 (344)
T ss_dssp HHHHHHHHHHH-HHTTCCCEEESSGGGTGGGSCHHH-------HHHHHHH-HHH-TTCCEEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHcCCCEEEeCccCcChhhCCHHH-------HHHHHHH-HhC-CCCcEEEecCCCCHHHHHHHHHHHH
Confidence 44455544434 458999999998775322222211 1222322 212 378987544434444443332
Q ss_pred HcCCCeeeehHHHHhC-Cc
Q 013784 287 RKGAHHVMVGRAAYQN-PW 304 (436)
Q Consensus 287 ~~Gad~VmiGRa~l~~-P~ 304 (436)
+.|||+||+-...+.. |.
T Consensus 116 ~~Gadavlv~~P~y~~~~s 134 (344)
T 2hmc_A 116 KVGAKGLMVIPRVLSRGSV 134 (344)
T ss_dssp HHTCSEEEECCCCSSSTTC
T ss_pred hcCCCEEEECCCccCCCCC
Confidence 3799999999998877 53
No 461
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=79.86 E-value=44 Score=32.06 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=88.6
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++.+.. +.++-.+.++.++++|+|++-+- .|.-. + ...+-+.+-.++|.+++++||.+=-
T Consensus 79 ~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 79 HGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIH--MPIHP--Y---------VTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp TTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEEC--CCCCS--C---------CCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred CCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 456799999974 88888899999999999998764 45421 1 2456788888888888899987754
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC--CcEEEEeCCCCCH
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP--DLTFTLNGGINTV 279 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~--~iPVIanGgI~s~ 279 (436)
+ |.+- +.+.+ .++++.-.+-+|--.. | ++..+.++++..+ +..-+.+|+=.
T Consensus 145 ~-g~~l--~~~~~----~~La~~pnIvgiKdss------g------------d~~~~~~~~~~~~~~~f~~v~~G~d~-- 197 (316)
T 3e96_A 145 K-DPEI--SDRVL----VDLAPLQNLVGVKYAI------N------------DLPRFAKVVRSIPEEHQIAWICGTAE-- 197 (316)
T ss_dssp C-CTTS--CTHHH----HHHTTCTTEEEEEECC------C------------CHHHHHHHHTTSCGGGCCEEEETTCT--
T ss_pred C-CCCC--CHHHH----HHHHcCCCEEEEEeCC------C------------CHHHHHHHHHhcCCCCceEEEeCChH--
Confidence 4 4332 22222 3343322232222110 1 1455566666543 22215566421
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
.-+..++..|++|++.|.+-+ .|..+.+-.+
T Consensus 198 ~~~~~~l~~G~~G~is~~an~-~P~~~~~l~~ 228 (316)
T 3e96_A 198 KWAPFFWHAGAKGFTSGLVNL-LPQKAVEMLE 228 (316)
T ss_dssp TTHHHHHHHTCCEEEESGGGT-CHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEechhhh-hHHHHHHHHH
Confidence 113345678999999998753 4665444333
No 462
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=79.83 E-value=43 Score=31.90 Aligned_cols=150 Identities=13% Similarity=0.134 Sum_probs=89.5
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++-.+.++.+++.|+|++-+- .|.-. . ...+-+.+-.++|.+++++||.+=-
T Consensus 71 ~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~-------~----~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 71 QRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAI--LEAYF-------P----LKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp TTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEE--ECCSS-------C----CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCCC-------C----CCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456799999999999999999999999999998763 34321 1 2346677888888888899988765
Q ss_pred ccCCCCC-CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCH
Q 013784 202 RIGVDDH-DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTV 279 (436)
Q Consensus 202 R~G~~~~-~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~ 279 (436)
-++.... -+.+.+ .++.+.-.+-+|--.. | ++..+.++++... ++. +.+|+=.
T Consensus 138 ~P~~tg~~l~~~~~----~~La~~pnIvgiKdss------g------------d~~~~~~~~~~~~~~f~-v~~G~d~-- 192 (300)
T 3eb2_A 138 NPQFQRSDLTLDVI----ARLAEHPRIRYIKDAS------T------------NTGRLLSIINRCGDALQ-VFSASAH-- 192 (300)
T ss_dssp CTTTCSSCCCHHHH----HHHHTSTTEEEEEECS------S------------BHHHHHHHHHHHGGGSE-EEECTTS--
T ss_pred CccccCCCCCHHHH----HHHHcCCCEEEEEcCC------C------------CHHHHHHHHHHcCCCeE-EEeCcHH--
Confidence 3332211 123322 3343322233332211 1 1344444443322 344 4455432
Q ss_pred HHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 280 DEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 280 ~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
.+...+..|++|++.|.+-+ -|.++.+-.+
T Consensus 193 -~~~~~l~~G~~G~is~~an~-~P~~~~~l~~ 222 (300)
T 3eb2_A 193 -IPAAVMLIGGVGWMAGPACI-APRQSVALYE 222 (300)
T ss_dssp -CHHHHHHTTCCEEEEGGGGT-CHHHHHHHHH
T ss_pred -HHHHHHhCCCCEEEeChhhh-hHHHHHHHHH
Confidence 24566778999999888753 4655444333
No 463
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=79.64 E-value=17 Score=34.54 Aligned_cols=123 Identities=17% Similarity=0.154 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
|.+.+.+.+++..+.|.|+|=++.. +|+ +.. -..+.-.++++.+++..+- |.+ -.|-. +..+.
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~Gt--------TGE-~~~--Ls~eEr~~v~~~~~~~~~g-Via--Gvg~~---~t~~a 80 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGT--------TGL-GPA--LSKDEKRQNLNALYDVTHK-LIF--QVGSL---NLNDV 80 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST--------TTT-GGG--SCHHHHHHHHHHHTTTCSC-EEE--ECCCS---CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHhCC-eEE--eeCCC---CHHHH
Confidence 6688888899888899999877642 233 222 3445556788888776543 333 33322 34444
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccC-CCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-e-----CCCCCHHHHHHH
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNAA 285 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G-~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa-n-----GgI~s~~da~~~ 285 (436)
.+. ++.+++.|+|++-+.. ..|.. .+. ..-++++.++.+.. ++|||. | |--.+++.+.++
T Consensus 81 i~l-a~~A~~~Gadavlv~~--P~y~~~~s~-------~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 81 MEL-VKFSNEMDILGVSSHS--PYYFPRLPE-------KFLAKYYEEIARIS-SHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHH-HHHHHTSCCSEEEECC--CCSSCSCCH-------HHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHH-HHHHHhcCCCEEEEcC--CcCCCCCCH-------HHHHHHHHHHHHhc-CCCEEEEECchHhCcCCCHHHHhcc
Confidence 553 5667889999998852 22111 110 01156667777765 788864 4 433566766554
No 464
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=79.63 E-value=17 Score=36.77 Aligned_cols=157 Identities=16% Similarity=0.135 Sum_probs=86.7
Q ss_pred CCcEEEEE---cCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCcccc-ccCChHHHHHHHHHHhhc--cCCcE
Q 013784 124 QHPIVLQI---GGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVS-LMLDPKFVGEAMSVIAAN--TNVPV 197 (436)
Q Consensus 124 ~~pi~vQL---~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~-Ll~~~~~l~eiv~av~~~--~~iPv 197 (436)
..|+++=+ ||+.+ ...+.++.+.++|+.+|.|-=..+.+| |.|+.|+. |....+.+..|..+.... .+.++
T Consensus 148 ~~PIiaD~DtGfG~~~-nv~~tvk~~i~AGaaGi~IEDq~~~~K--kCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~ 224 (429)
T 1f8m_A 148 LAPIVADGEAGFGGAL-NVYELQKALIAAGVAGSHWEDQLASEK--KCGHLGGKVLIPTQQHIRTLTSARLAADVADVPT 224 (429)
T ss_dssp SCCEEEECTTTTSSHH-HHHHHHHHHHHTTCSEEEEECBCGGGC--CCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEECCCCCCCcH-HHHHHHHHHHHcCCEEEEEecCCCccc--cccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCE
Confidence 37999887 35444 688899999999999999965443222 23444554 444344444444443322 46676
Q ss_pred EEEeccCCCC----------------------------CCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCC
Q 013784 198 SVKCRIGVDD----------------------------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRT 249 (436)
Q Consensus 198 svKiR~G~~~----------------------------~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~ 249 (436)
.+--|..-.. ...+++.++.. +...+ |+|.|-+++...
T Consensus 225 vIiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra-~AYa~-gAD~if~e~~~~------------ 290 (429)
T 1f8m_A 225 VVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARA-KAYAP-FADLIWMETGTP------------ 290 (429)
T ss_dssp EEEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHH-HHHGG-GCSEEEECCSSC------------
T ss_pred EEEEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHH-HHHHh-cCCEEEeCCCCC------------
Confidence 6655653211 02355555543 34445 899999985321
Q ss_pred CCCccHHHHHHHHhc----CCCcEEEEeCC-CCC------HHHHH----HHHHcCCCeeeehHHHHh
Q 013784 250 IPPLKYEYYYALLRD----FPDLTFTLNGG-INT------VDEVN----AALRKGAHHVMVGRAAYQ 301 (436)
Q Consensus 250 i~~~~~~~v~~l~~~----~~~iPVIanGg-I~s------~~da~----~~l~~Gad~VmiGRa~l~ 301 (436)
+.+.+.++++. +|..++..|+- ..+ .+++. ++-+.|...|.++-+.+.
T Consensus 291 ----~~eei~~f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~r 353 (429)
T 1f8m_A 291 ----DLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFH 353 (429)
T ss_dssp ----CHHHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHHHH
T ss_pred ----CHHHHHHHHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHHcCCeEEEECcHHHH
Confidence 13444444433 23334555542 233 23333 333478888888776543
No 465
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=79.59 E-value=18 Score=34.46 Aligned_cols=122 Identities=17% Similarity=0.107 Sum_probs=72.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
|.+.+.+.++++.+.|+|+|=++.. +|+ +.. -..+.=.++++.+++..+- |.+ -.|-. +..+.
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~Gt--------tGE-~~~--Ls~eEr~~v~~~~~~~~~g-via--Gvg~~---~t~~a 80 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGT--------TGL-GPS--LSPEEKLENLKAVYDVTNK-IIF--QVGGL---NLDDA 80 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST--------TTT-GGG--SCHHHHHHHHHHHHTTCSC-EEE--ECCCS---CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHcCC-EEE--ecCCC---CHHHH
Confidence 5678888899888999999877632 233 222 3444556777777776543 333 33322 34444
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccC-CCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-e-----CCCCCHHHHHH
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNA 284 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G-~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa-n-----GgI~s~~da~~ 284 (436)
.+. ++.+++.|+|++-+.. ..|.. .+. ..-++++.++.+.. ++||+. | |--.+++.+.+
T Consensus 81 i~l-a~~A~~~Gadavlv~~--P~y~~~~s~-------~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 81 IRL-AKLSKDFDIVGIASYA--PYYYPRMSE-------KHLVKYFKTLCEVS-PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHH-HHHGGGSCCSEEEEEC--CCSCSSCCH-------HHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHH-HHHHHhcCCCEEEEcC--CCCCCCCCH-------HHHHHHHHHHHhhC-CCCEEEEECchhhCcCCCHHHHHh
Confidence 553 5677889999998752 22111 110 01155666777765 788764 4 43357777666
No 466
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=79.50 E-value=16 Score=34.58 Aligned_cols=122 Identities=12% Similarity=0.073 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
|.+.+.+.++++.+.|+|+|=++.. +|+ +.. -..+.=.++++.+++..+- |.+ -.|-. +..+.
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~Gt--------tGE-~~~--Ls~~Er~~v~~~~~~~~~g-vi~--Gvg~~---~t~~a 79 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGT--------TGL-GPA--LSLQEKMELTDAATSAARR-VIV--QVASL---NADEA 79 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST--------TTT-GGG--SCHHHHHHHHHHHHHHCSS-EEE--ECCCS---SHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc--------ccC-hhh--CCHHHHHHHHHHHHHHhCC-EEE--eeCCC---CHHHH
Confidence 6678888889888899999877632 233 222 2344445667776665533 333 33322 34444
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccC-CCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-e-----CCCCCHHHHHH
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNG-ISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGINTVDEVNA 284 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G-~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa-n-----GgI~s~~da~~ 284 (436)
.+. ++.+++.|+|++-+.. ..|.. .+. ..-++++.++.+.. ++|||. | |--.+++.+.+
T Consensus 80 i~l-a~~A~~~Gadavlv~~--P~y~~~~s~-------~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 80 IAL-AKYAESRGAEAVASLP--PYYFPRLSE-------RQIAKYFRDLCSAV-SIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHH-HHHHHHTTCSEEEECC--SCSSTTCCH-------HHHHHHHHHHHHHC-SSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHH-HHHHHhcCCCEEEEcC--CcCCCCCCH-------HHHHHHHHHHHHhc-CCCEEEEeChhhcCCCCCHHHHHh
Confidence 553 5667889999998852 22211 111 01156667777765 788865 4 43457777766
No 467
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=79.46 E-value=10 Score=34.52 Aligned_cols=80 Identities=11% Similarity=0.140 Sum_probs=53.7
Q ss_pred CcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC
Q 013784 195 VPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG 274 (436)
Q Consensus 195 iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG 274 (436)
.|+..-+|. .+.++..++++ .+-+.|++.|.+--++. ...+.+.++.+.++++ +++.|
T Consensus 16 ~~~i~v~r~--~~~~~~~~~~~----al~~gGv~~iel~~k~~---------------~~~~~i~~l~~~~~~~-~vgag 73 (214)
T 1wbh_A 16 GPVVPVIVV--KKLEHAVPMAK----ALVAGGVRVLNVTLRTE---------------CAVDAIRAIAKEVPEA-IVGAG 73 (214)
T ss_dssp CSEEEEECC--SSGGGHHHHHH----HHHHTTCCEEEEESCST---------------THHHHHHHHHHHCTTS-EEEEE
T ss_pred CCEEEEEEC--CCHHHHHHHHH----HHHHcCCCEEEEeCCCh---------------hHHHHHHHHHHHCcCC-EEeeC
Confidence 466666665 22233333332 33469999988753321 1156677777777655 56667
Q ss_pred CCCCHHHHHHHHHcCCCeeeeh
Q 013784 275 GINTVDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 275 gI~s~~da~~~l~~Gad~VmiG 296 (436)
-+.+.+++..+++.|||+|..|
T Consensus 74 tvi~~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 74 TVLNPQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp SCCSHHHHHHHHHHTCSCEEES
T ss_pred EEEEHHHHHHHHHcCCCEEEcC
Confidence 7999999999999999999987
No 468
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=79.39 E-value=2.9 Score=39.56 Aligned_cols=53 Identities=9% Similarity=0.048 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
+++...+-|+...+.|+|.||||+|.+. ....+.+.++++.+.+.+++||++=
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~-------------v~~~ee~~rvv~~i~~~~~~pisID 75 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAV-------------QDKVSAMEWLVEVTQEVSNLTLCLD 75 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC-----------------CHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCC-------------CChHHHHHHHHHHHHHhCCCeEEEe
Confidence 5566666677677789999999986432 1456788889999888778998873
No 469
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=79.00 E-value=51 Score=32.29 Aligned_cols=131 Identities=11% Similarity=0.081 Sum_probs=80.2
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-C--CcEEEE
Q 013784 124 QHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-N--VPVSVK 200 (436)
Q Consensus 124 ~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~--iPvsvK 200 (436)
.-|+..-+...+++++++.++...+.||..+-+..|.. +.+.-.+.++++++++ | +.+.+=
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~----------------~~~~di~~v~~vr~a~~g~~~~l~vD 202 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR----------------PIEIDIEAIRKVWEAVRGTGIALAAD 202 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS----------------CHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC----------------CHHHHHHHHHHHHhhccCCeeEEEEe
Confidence 34566777788999988888777778999998865422 2222345555666544 3 334333
Q ss_pred eccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHH
Q 013784 201 CRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVD 280 (436)
Q Consensus 201 iR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~ 280 (436)
..-+|+ ..+..++ .+.+++.+. ++ +. .+. .++.+..+.+.. ++||.+-=.+.+..
T Consensus 203 aN~~~~----~~~A~~~-~~~l~~~~~-~i-----Ee-----------P~~--~~~~~~~l~~~~-~~pia~dE~~~~~~ 257 (376)
T 4h2h_A 203 GNRGWT----TRDALRF-SRECPDIPF-VM-----EQ-----------PCN--SFEDLEAIRPLC-HHALYMDEDGTSLN 257 (376)
T ss_dssp CTTCCC----HHHHHHH-HHHCTTSCE-EE-----ES-----------CSS--SHHHHHHHGGGC-CSCEEESTTCCSHH
T ss_pred eccCCC----HHHHHHH-HHHHhhccc-cc-----cC-----------Ccc--hhhhHhhhhhcc-cCccccCcccCCHH
Confidence 333453 3344443 344555543 22 11 111 255555665554 89998888899999
Q ss_pred HHHHHHHcC-CCeeee
Q 013784 281 EVNAALRKG-AHHVMV 295 (436)
Q Consensus 281 da~~~l~~G-ad~Vmi 295 (436)
++.++++.| +|.|++
T Consensus 258 ~~~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 258 TVITAAATSLVDGFGM 273 (376)
T ss_dssp HHHHHHHTTCCSEECC
T ss_pred HHHHHHHhhccCcccc
Confidence 999999855 677764
No 470
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=78.70 E-value=8.4 Score=36.98 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=60.6
Q ss_pred ccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhcCCc------cEEEEccCcccccCCCC
Q 013784 171 FGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPT------RHFIIHSRKALLNGISP 244 (436)
Q Consensus 171 yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gv------d~I~vhgrt~~~~G~~~ 244 (436)
.|+..+.+.+++.+ +. .++.||.+|.-...+. . |+...+..+ .+.|. +.|++-=|...+ +.
T Consensus 113 IgA~~~~n~~LLr~----~a-~~gkPVilK~G~~~t~-~---e~~~ave~i-~~~Gn~~~~~~~~i~L~erg~~y-~~-- 179 (288)
T 3tml_A 113 TPAFLCRQTDFIHA----CA-RSGKPVNIKKGQFLAP-H---DMKNVIDKA-RDAAREAGLSEDRFMACERGVSF-GY-- 179 (288)
T ss_dssp ECGGGTTCHHHHHH----HH-TSSSCEEEECCTTCCT-T---HHHHHHHHH-HHHHHTTTCCSCCEEEEECCEEC-SS--
T ss_pred ECcccccCHHHHHH----HH-ccCCcEEEeCCCCCCH-H---HHHHHHHHH-HHcCCCccCCCCcEEEEeCCCCC-CC--
Confidence 47777888886543 32 5689999997763222 2 333322323 34565 555543333222 11
Q ss_pred CCCCCCCCccHHHHHHHHhcCCCcEEEEe---------------CCCCCH--HHHHHHHHcCCCeeeehH
Q 013784 245 AENRTIPPLKYEYYYALLRDFPDLTFTLN---------------GGINTV--DEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 245 ~~~~~i~~~~~~~v~~l~~~~~~iPVIan---------------GgI~s~--~da~~~l~~Gad~VmiGR 297 (436)
++ -.+++..+..+.+ + ++||+.. ||-++. .-+.++...||||++|=+
T Consensus 180 -~~---~~vdl~~i~~lk~-~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~ 243 (288)
T 3tml_A 180 -NN---LVSDMRSLAIMRE-T-NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMET 243 (288)
T ss_dssp -SC---EECCHHHHHHGGG-G-SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEE
T ss_pred -Cc---CcCCHHHHHHHHh-c-CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEee
Confidence 11 1135777777655 5 8999883 343332 345667779999999754
No 471
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.28 E-value=8.2 Score=36.21 Aligned_cols=42 Identities=26% Similarity=0.320 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCCC------HHHHHHHHHcCCCeeeeh
Q 013784 255 YEYYYALLRDFPDLTFTLNGGINT------VDEVNAALRKGAHHVMVG 296 (436)
Q Consensus 255 ~~~v~~l~~~~~~iPVIanGgI~s------~~da~~~l~~Gad~VmiG 296 (436)
++.+.++.+..+++||+..|.... .+.+..+.+.|+|+|.+.
T Consensus 82 ~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 82 LELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 345666666655899999653321 244555667999999984
No 472
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=78.27 E-value=5.9 Score=39.36 Aligned_cols=40 Identities=8% Similarity=0.162 Sum_probs=33.8
Q ss_pred HHHHHHHHhcCCCcEEEEe--CCCCCHHHHHHHHHcCCCeeee
Q 013784 255 YEYYYALLRDFPDLTFTLN--GGINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 255 ~~~v~~l~~~~~~iPVIan--GgI~s~~da~~~l~~Gad~Vmi 295 (436)
++.+..+++.. ++||++= |+-.+++++..+.+.|+|+|-+
T Consensus 176 ~~~i~~i~~~~-~vPVivK~vG~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 176 LEKLRDISKEL-SVPIIVKESGNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp HHHHHHHHTTC-SSCEEEECSSSCCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEE
Confidence 66777777765 8999985 6667999999999999999988
No 473
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=78.19 E-value=34 Score=34.66 Aligned_cols=199 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred CCCCCChHHHHHHH--HHcCCCcEEE-eccccchhhhhcccchhhhhc-------cCCCCCcEEEEEcCCCHHHHHHHHH
Q 013784 75 PMMDWTDNHYRTLA--RLISKHAWLY-TEMLAAETIIYQQGNLDRFLA-------FSPEQHPIVLQIGGSNLDNLAKATE 144 (436)
Q Consensus 75 PMagvtd~~fr~~~--~~~Gg~gl~~-temv~~~~l~~~~~~~~~~~~-------~~~~~~pi~vQL~g~~p~~~~~aA~ 144 (436)
|..|.|..+|..++ ...||++++= -|.+..+....-.+.+....+ -+-+.+-..+|+. .+++++.+=|+
T Consensus 170 PklGLs~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~~~~em~~Ra~ 248 (432)
T 3nwr_A 170 PNVGLSAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT-DDLDAMRRHAE 248 (432)
T ss_dssp SSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC-CCHHHHHHHHH
Q ss_pred HHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHH---HHHHHHHH
Q 013784 145 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQ---LCDFIYKV 221 (436)
Q Consensus 145 ~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~---~~~~la~~ 221 (436)
++.+.|.+.+-+| ... +| ...+..+++..++|+-.= |.|+-....-.. -...+.++
T Consensus 249 ~a~e~G~~~~mvd------~~~----~G----------~~a~~~l~r~~~~~lh~H-rA~hga~~r~~~~Gi~~~vl~Kl 307 (432)
T 3nwr_A 249 LVEREGGSCVMAS------INW----CG----------FSAIQSLRRTTPLVLHAH-RNGYGMMSRDPALGMSFQAYQTL 307 (432)
T ss_dssp HHHHTTCCEEEEE------HHH----HC----------HHHHHHHHHHCCSEEEEE-CTTTTTTTSSTTEEECHHHHHHH
T ss_pred HHHHcCCCEEEEe------ccC----CC----------HHHHHHHHhcCCceEEEC-cCcccccccCCCCCcCHHHHHHH
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCc-E--E--EEeCCCCCHHHHHHHHH-cC-CC-ee
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDL-T--F--TLNGGINTVDEVNAALR-KG-AH-HV 293 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~i-P--V--IanGgI~s~~da~~~l~-~G-ad-~V 293 (436)
+.-+|+|.|++-+--..+......- ......+.+...+. | + +.+||| .+..+-+.++ .| -| ..
T Consensus 308 ~RlaG~D~ih~gt~~GK~~e~~~~~--------~~~~~~~~~~~~~~k~~~v~PV~SGGi-h~~~~p~l~~~~G~~Dvvl 378 (432)
T 3nwr_A 308 WRLSGVDHMHVHGLAGKFAQSDAEV--------IESARDCATPLAAGCDDAVLPAFSSGQ-WAGTVQATFDAVRSTDLLF 378 (432)
T ss_dssp HHTBTCSEEEEECTTCSSSCCHHHH--------HHHHHHHHSCSSTTCCCCCEEEECSSC-SGGGHHHHHHHHSSSCSEE
T ss_pred HHHcCCCeeecCCCcCCcCCCcHHH--------HHHHHHHhCchhcCCCCceEeeecCCC-CHHHHHHHHHHhCCCcEEE
Q ss_pred eehHHHHhCCc
Q 013784 294 MVGRAAYQNPW 304 (436)
Q Consensus 294 miGRa~l~~P~ 304 (436)
+.|.|.++.||
T Consensus 379 ~~GGG~~gHP~ 389 (432)
T 3nwr_A 379 MSGGGILAHPD 389 (432)
T ss_dssp ECSHHHHTCTT
T ss_pred EcCCccccCCC
No 474
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=78.10 E-value=13 Score=33.97 Aligned_cols=145 Identities=9% Similarity=0.119 Sum_probs=71.5
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcE-EEEeccC
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPV-SVKCRIG 204 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPv-svKiR~G 204 (436)
+++++........+.++.+.++++|||+||+....|..... + + .+.+.+.+.+ +..|+.+ ++-....
T Consensus 8 ~lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~--~--~----~~~~~~~~~~----~~~gl~~~~~~~~~~ 75 (272)
T 2q02_A 8 RFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVT--D--D----LNYNQVRNLA----EKYGLEIVTINAVYP 75 (272)
T ss_dssp GEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTT--T--T----CCHHHHHHHH----HHTTCEEEEEEEETT
T ss_pred hhhhcccccCCCCHHHHHHHHHHcCCCEEEeeccccccccc--c--c----cCHHHHHHHH----HHcCCeEEechhhhc
Confidence 36666654332345677788889999999998755532110 1 1 2333333333 2346666 3322222
Q ss_pred CCCCC--cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-e-----CCC
Q 013784 205 VDDHD--SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-N-----GGI 276 (436)
Q Consensus 205 ~~~~~--~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa-n-----GgI 276 (436)
+...+ ..+.+.+ ...++.+.|++.|.+|+... + ...+.....-.+..+.+..++. ++.|.. | .-+
T Consensus 76 ~~~~~~~~~~~~~~-~i~~a~~lG~~~v~~~~g~~---~--~~~~~~~~~~~l~~l~~~a~~~-gv~l~~E~~~~~~~~~ 148 (272)
T 2q02_A 76 FNQLTEEVVKKTEG-LLRDAQGVGARALVLCPLND---G--TIVPPEVTVEAIKRLSDLFARY-DIQGLVEPLGFRVSSL 148 (272)
T ss_dssp TTSCCHHHHHHHHH-HHHHHHHHTCSEEEECCCCS---S--BCCCHHHHHHHHHHHHHHHHTT-TCEEEECCCCSTTCSC
T ss_pred cCCcHHHHHHHHHH-HHHHHHHhCCCEEEEccCCC---c--hhHHHHHHHHHHHHHHHHHHHc-CCEEEEEecCCCcccc
Confidence 32211 1222222 33455678999999985432 1 0111000000112222333443 555543 1 246
Q ss_pred CCHHHHHHHHH-cC
Q 013784 277 NTVDEVNAALR-KG 289 (436)
Q Consensus 277 ~s~~da~~~l~-~G 289 (436)
.+.+++.++++ .+
T Consensus 149 ~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 149 RSAVWAQQLIREAG 162 (272)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHhC
Confidence 68899888887 55
No 475
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=77.71 E-value=5.9 Score=36.37 Aligned_cols=83 Identities=16% Similarity=0.089 Sum_probs=52.7
Q ss_pred cEEEEE----cCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 126 PIVLQI----GGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 126 pi~vQL----~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
|+.+-+ .+-+.++..++++.+.++|+|+|..|.|-- . |+ ...+.+.++. +.++-++.||.
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~------~---gg---a~~~~i~~v~----~~v~~~ipVia 180 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFA------P---RG---TTLEEVRLIK----SSAKGRIKVKA 180 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCS------S---SC---CCHHHHHHHH----HHHTTSSEEEE
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCC------C---CC---CCHHHHHHHH----HHhCCCCcEEE
Confidence 788888 345778899999999999999997776421 1 22 3444444444 44443455677
Q ss_pred ccCCCCCCcHHHHHHHHHHHhhcCCccEEEE
Q 013784 202 RIGVDDHDSYNQLCDFIYKVSSLSPTRHFII 232 (436)
Q Consensus 202 R~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v 232 (436)
.-|+.+ .++..+. ++ +|+|.|-+
T Consensus 181 ~GGI~t---~~da~~~----l~-aGA~~iG~ 203 (225)
T 1mzh_A 181 SGGIRD---LETAISM----IE-AGADRIGT 203 (225)
T ss_dssp ESSCCS---HHHHHHH----HH-TTCSEEEE
T ss_pred ECCCCC---HHHHHHH----HH-hCchHHHH
Confidence 777654 4444443 33 89997644
No 476
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=77.61 E-value=6.1 Score=39.21 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=35.1
Q ss_pred ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeeee
Q 013784 253 LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMV 295 (436)
Q Consensus 253 ~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vmi 295 (436)
..|+.+..+++.. ++||+.-| |.+++++..+.+.|+|+|.+
T Consensus 216 ~~~~~i~~lr~~~-~~PvivK~-v~~~e~a~~a~~~Gad~I~v 256 (368)
T 2nli_A 216 ISPRDIEEIAGHS-GLPVFVKG-IQHPEDADMAIKRGASGIWV 256 (368)
T ss_dssp CCHHHHHHHHHHS-SSCEEEEE-ECSHHHHHHHHHTTCSEEEE
T ss_pred hhHHHHHHHHHHc-CCCEEEEc-CCCHHHHHHHHHcCCCEEEE
Confidence 4588888887765 89998874 68999999999999999998
No 477
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=77.55 E-value=5 Score=38.53 Aligned_cols=73 Identities=8% Similarity=0.058 Sum_probs=44.8
Q ss_pred HHHhhcCCccEEEEccC----cccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHcCCCeee
Q 013784 219 YKVSSLSPTRHFIIHSR----KALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVM 294 (436)
Q Consensus 219 a~~~e~~Gvd~I~vhgr----t~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~Gad~Vm 294 (436)
++.++++|+|+|.+... .....|.. .....+.+.++.+.+ ++||+++-.+...+.++.+++.|||+|.
T Consensus 34 a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~-------~~~~~~~i~~I~~~~-~iPv~~k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 34 AKIAEEAGAVAVMALERVPADIRAAGGVA-------RMADPTIVEEVMNAV-SIPVMAKARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHTTCSEEEECCC-------CCCCC-------CCCCHHHHHHHHHHC-SSCEEEEECTTCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEEcCCCcchhhhccCcc-------cCCCHHHHHHHHHhC-CCCEEecccccchHHHHHHHHCCCCEEE
Confidence 34556799999954321 11111210 011266777777765 8999965444447778888889999996
Q ss_pred ehHHHH
Q 013784 295 VGRAAY 300 (436)
Q Consensus 295 iGRa~l 300 (436)
+...+
T Consensus 106 -~~~~l 110 (305)
T 2nv1_A 106 -ESEVL 110 (305)
T ss_dssp -ECTTS
T ss_pred -EeccC
Confidence 65555
No 478
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=77.14 E-value=8.4 Score=37.68 Aligned_cols=91 Identities=12% Similarity=0.125 Sum_probs=55.1
Q ss_pred CCcEEEEEcCC-------CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCc
Q 013784 124 QHPIVLQIGGS-------NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVP 196 (436)
Q Consensus 124 ~~pi~vQL~g~-------~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iP 196 (436)
+.|+.+=|... +.+++.+.++.++++|+|.|++..|.........+. | .+ .++++.+++.+++|
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~-~----~~----~~~~~~ik~~~~iP 279 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYP-G----YQ----VPFAELIRREADIP 279 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT-T----TT----HHHHHHHHHHTTCC
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCc-c----cc----HHHHHHHHHHcCCc
Confidence 67899888743 468889999999999999999986642221000111 1 12 34556666677889
Q ss_pred EEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE
Q 013784 197 VSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII 232 (436)
Q Consensus 197 vsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v 232 (436)
|.+- -|+. +.++.. +++++.++|.|.+
T Consensus 280 Vi~~--GgI~---s~e~a~----~~L~~G~aD~V~i 306 (340)
T 3gr7_A 280 TGAV--GLIT---SGWQAE----EILQNGRADLVFL 306 (340)
T ss_dssp EEEE--SSCC---CHHHHH----HHHHTTSCSEEEE
T ss_pred EEee--CCCC---CHHHHH----HHHHCCCeeEEEe
Confidence 7553 2232 233332 2344344998776
No 479
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=77.04 E-value=34 Score=32.30 Aligned_cols=212 Identities=10% Similarity=0.020 Sum_probs=106.1
Q ss_pred EEcCCCCCChHHHHHHHHHcCCCcEEEecccc---chhhhhcccchhhhh-ccCCC-CCcEEEEEcCCCHHHHHHHHHHH
Q 013784 72 SVAPMMDWTDNHYRTLARLISKHAWLYTEMLA---AETIIYQQGNLDRFL-AFSPE-QHPIVLQIGGSNLDNLAKATELA 146 (436)
Q Consensus 72 ilAPMagvtd~~fr~~~~~~Gg~gl~~temv~---~~~l~~~~~~~~~~~-~~~~~-~~pi~vQL~g~~p~~~~~aA~~~ 146 (436)
-|+|-...+......+++.+-.+|.-+-|..+ ++-+. .-.....++ .+... +.++ +.+..+.+. .+.+
T Consensus 16 ~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p-~~~~~~e~~~~i~~~~~~~v--~~l~~n~~~----i~~a 88 (295)
T 1ydn_A 16 LQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVP-QLADSREVMAGIRRADGVRY--SVLVPNMKG----YEAA 88 (295)
T ss_dssp HHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCG-GGTTHHHHHHHSCCCSSSEE--EEECSSHHH----HHHH
T ss_pred ccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccc-cccCHHHHHHHHHhCCCCEE--EEEeCCHHH----HHHH
Confidence 35555667777777777555444433333332 32111 000111221 12222 3334 344455444 3456
Q ss_pred HHCCCCEEEecCCC-CCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEecc--CCCC--CCcHHHHHHHHHHH
Q 013784 147 NAYNYDEINLNCGC-PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRI--GVDD--HDSYNQLCDFIYKV 221 (436)
Q Consensus 147 ~~~G~d~IdLN~gc-P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~--G~~~--~~~~~~~~~~la~~ 221 (436)
.++|++.|.+-.+. +.. .+. ..+-......+.+.++++.+++. |+.|..-+.. |..+ ..+.+++.+++ +.
T Consensus 89 ~~~G~~~V~i~~~~S~~h--~~~-~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~~~~~~~~-~~ 163 (295)
T 1ydn_A 89 AAAHADEIAVFISASEGF--SKA-NINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPYDGPVTPQAVASVT-EQ 163 (295)
T ss_dssp HHTTCSEEEEEEESCHHH--HHH-HTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETTTEECCHHHHHHHH-HH
T ss_pred HHCCCCEEEEEEecCHHH--HHH-HcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCcCCCCCHHHHHHHH-HH
Confidence 67899988775422 111 000 01222223445555566655443 6666533332 2221 12455555544 34
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC--CCC-CHHHHHHHHHcCCCeeeehHH
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GIN-TVDEVNAALRKGAHHVMVGRA 298 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG--gI~-s~~da~~~l~~Gad~VmiGRa 298 (436)
+.+.|+|.|.+.- |. |.. .|....+.+..+.+.++++|+..-| +-. ..+.+.++++.||+-|-+.=+
T Consensus 164 ~~~~G~d~i~l~D-t~---G~~------~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~ 233 (295)
T 1ydn_A 164 LFSLGCHEVSLGD-TI---GRG------TPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVG 233 (295)
T ss_dssp HHHHTCSEEEEEE-TT---SCC------CHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTT
T ss_pred HHhcCCCEEEecC-CC---CCc------CHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccc
Confidence 4578999998863 11 321 1223366677777766447887665 322 235567777899999887632
Q ss_pred HHh-CCcc
Q 013784 299 AYQ-NPWY 305 (436)
Q Consensus 299 ~l~-~P~l 305 (436)
=++ ||+.
T Consensus 234 GlG~cp~a 241 (295)
T 1ydn_A 234 GLGGCPFA 241 (295)
T ss_dssp CCSCBTTB
T ss_pred cCCCCCCC
Confidence 222 7765
No 480
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=76.94 E-value=3.5 Score=40.16 Aligned_cols=66 Identities=14% Similarity=0.081 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEE
Q 013784 134 SNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVK 200 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvK 200 (436)
.+++...+-|+...+.|+|.||||+-+..+...-++. .-+.....+.+..+++++++.+++||+|=
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~-~V~~~eE~~Rv~pvI~~l~~~~~vpISID 111 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTD-SPSTQIELDRLLPVIDAIKKRFPQLISVD 111 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC------CHHHHHHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccC-CCCHHHHHHHHHHHHHHHHhhCCCeEEEe
Confidence 4677777777777788999999996433321000000 00112334556777788887789999884
No 481
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=76.93 E-value=6.7 Score=36.42 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
+++...++++++.++|+|+|-.+-|-.. .|++ .++ -++.+++.++-++.||..-|+.. .++.
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~~--------~~gA---t~e----dv~lm~~~v~~~v~VKaaGGIrt---~~~a 205 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFHP--------SGGA---SVQ----AVEIMARTVGERLGVKASGGIRT---AEQA 205 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCCT--------TCSC---CHH----HHHHHHHHHTTTSEEEEESSCCS---HHHH
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCCC--------CCCC---CHH----HHHHHHHHhCCCceEEEeCCCCC---HHHH
Confidence 7788999999999999999987766421 1222 222 22333444466899999998764 4444
Q ss_pred HHHHHHHhhcCCccEEEEc
Q 013784 215 CDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vh 233 (436)
.+++ ++|++.|-.+
T Consensus 206 ~~~i-----~aGa~RiGtS 219 (231)
T 3ndo_A 206 AAML-----DAGATRLGLS 219 (231)
T ss_dssp HHHH-----HTTCSEEEES
T ss_pred HHHH-----Hhcchhcccc
Confidence 4432 5999987664
No 482
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=76.91 E-value=51 Score=31.16 Aligned_cols=194 Identities=13% Similarity=0.107 Sum_probs=106.3
Q ss_pred EcCCC--CCChHHHHHHHH---HcCCCcEEEeccccchhhhhcccc---hhhhhccCCCCCcEEEEEcCCCHHHHHHHHH
Q 013784 73 VAPMM--DWTDNHYRTLAR---LISKHAWLYTEMLAAETIIYQQGN---LDRFLAFSPEQHPIVLQIGGSNLDNLAKATE 144 (436)
Q Consensus 73 lAPMa--gvtd~~fr~~~~---~~Gg~gl~~temv~~~~l~~~~~~---~~~~~~~~~~~~pi~vQL~g~~p~~~~~aA~ 144 (436)
+.||. |+....++.++. ..|-.|+++.+...--......++ ++...+......|+++++.+++.++..+.++
T Consensus 11 vTPf~~dgiD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~ 90 (291)
T 3a5f_A 11 ITPFTNTGVDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSK 90 (291)
T ss_dssp CCCBCSSSBCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHH
T ss_pred EcCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHH
Confidence 34552 355566777763 344345555443221111111111 1122223345679999999999999999999
Q ss_pred HHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe---ccCCCCCCcHHHHHHHHHHH
Q 013784 145 LANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC---RIGVDDHDSYNQLCDFIYKV 221 (436)
Q Consensus 145 ~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi---R~G~~~~~~~~~~~~~la~~ 221 (436)
.+++.|+|++-+- .|.-. + -..+-+.+-.++|.+++++||.+=- |.|.+- +.+.+ .++
T Consensus 91 ~a~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l--~~~~~----~~L 151 (291)
T 3a5f_A 91 WAESIGVDGLLVI--TPYYN--K---------TTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNI--TPGTL----KEL 151 (291)
T ss_dssp HHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCC--CHHHH----HHH
T ss_pred HHHhcCCCEEEEc--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCC--CHHHH----HHH
Confidence 9999999998765 34421 1 2345677777788888899987643 345432 23333 334
Q ss_pred hhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCCCCHHHHHHHHHcCCCeeeehHHHH
Q 013784 222 SSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 300 (436)
Q Consensus 222 ~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI~s~~da~~~l~~Gad~VmiGRa~l 300 (436)
++.-.+-+|--.. | +...+.++++..+ ++. +.+|+= +.+...+..|++|+..|.+-+
T Consensus 152 a~~pnivgiK~s~------g------------d~~~~~~~~~~~~~~f~-v~~G~d---~~~~~~l~~G~~G~is~~an~ 209 (291)
T 3a5f_A 152 CEDKNIVAVXEAS------G------------NISQIAQIKALCGDKLD-IYSGND---DQIIPILALGGIGVISVLANV 209 (291)
T ss_dssp TTSTTEEEEEECS------C------------CHHHHHHHHHHHGGGSE-EEESCG---GGHHHHHHTTCCEEEESGGGT
T ss_pred HcCCCEEEEeCCC------C------------CHHHHHHHHHhcCCCeE-EEeCcH---HHHHHHHHCCCCEEEecHHHh
Confidence 3322232222111 1 1334444443221 343 466741 235567779999999998764
Q ss_pred hCCcchhh
Q 013784 301 QNPWYTLG 308 (436)
Q Consensus 301 ~~P~lf~~ 308 (436)
.|..+.+
T Consensus 210 -~P~~~~~ 216 (291)
T 3a5f_A 210 -IPEDVHN 216 (291)
T ss_dssp -CHHHHHH
T ss_pred -cHHHHHH
Confidence 4665443
No 483
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=76.82 E-value=31 Score=34.95 Aligned_cols=121 Identities=12% Similarity=0.163 Sum_probs=77.0
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhcc-CCcEEEEeccCCCCCCcH
Q 013784 134 SNLDNLAKATELANA-YNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANT-NVPVSVKCRIGVDDHDSY 211 (436)
Q Consensus 134 ~~p~~~~~aA~~~~~-~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~-~iPvsvKiR~G~~~~~~~ 211 (436)
.+|+.+++.|+.+.+ .||..+-+..|.. +++.-.+.+++||+++ ++.+.+=.--+|+ .
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~----------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~----~ 246 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF----------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWT----V 246 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS----------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSC----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC----------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCC----H
Confidence 578998888876654 6999988765421 2333456677777765 4445554444554 3
Q ss_pred HHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHHc-CC
Q 013784 212 NQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRK-GA 290 (436)
Q Consensus 212 ~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~~-Ga 290 (436)
.+..++ .+.+++. +.+|- +. ++ +++...++.+.. .+||.+.=-+.+..++.++++. .+
T Consensus 247 ~~Ai~~-~~~L~~~-l~~iE----eP------------~~--~~~~~~~l~~~~-~iPIa~dE~~~~~~~~~~~l~~~a~ 305 (441)
T 3vc5_A 247 ETSIRV-GRALDGV-LEYLE----DP------------TP--GIDGMARVAAEV-PMPLATNMCVVTPEHLPAAVERRPI 305 (441)
T ss_dssp HHHHHH-HHHTTTT-CSEEE----CC------------SS--SHHHHHHHHTTS-SSCEEESSSCCSGGGHHHHHHHCCC
T ss_pred HHHHHH-HHHHHHH-HHHhh----cc------------CC--CHHHHHHHHhcC-CCCEEeCCCCCCHHHHHHHHHhCCC
Confidence 344443 4455655 55543 11 11 366666776664 8999887788999999999984 47
Q ss_pred Ceeee
Q 013784 291 HHVMV 295 (436)
Q Consensus 291 d~Vmi 295 (436)
|.|++
T Consensus 306 dii~~ 310 (441)
T 3vc5_A 306 GVLLI 310 (441)
T ss_dssp SEEEE
T ss_pred CEEee
Confidence 77765
No 484
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=76.75 E-value=18 Score=32.69 Aligned_cols=128 Identities=14% Similarity=0.099 Sum_probs=72.4
Q ss_pred cEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhc-cCCc--EEEEec
Q 013784 126 PIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAAN-TNVP--VSVKCR 202 (436)
Q Consensus 126 pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~-~~iP--vsvKiR 202 (436)
++++-+=-.+.+...+.++.+ +.|+|.+|+++ |. +. .+| .++++++++. .+.| +.+|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~-~~~vd~ie~g~--~~--~~---~~G----------~~~i~~lr~~~~~~~i~ld~~l~ 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNV-ASYVDVIEVGT--IL--AF---AEG----------MKAVSTLRHNHPNHILVCDMKTT 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHH-GGGCSEEEECH--HH--HH---HHT----------THHHHHHHHHCTTSEEEEEEEEC
T ss_pred CeEEEeCCCCHHHHHHHHHHh-cCCceEEEeCc--HH--HH---hcC----------HHHHHHHHHhCCCCcEEEEEeec
Confidence 456666566777666666665 34799999874 21 11 123 2567777765 3545 456653
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEE-eCCCCCHHH
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTL-NGGINTVDE 281 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIa-nGgI~s~~d 281 (436)
+. .+... +.+.++|+|.|++|+-.. ....+.+.+..++. +++++. .=++.|.++
T Consensus 70 ---d~---p~~~~----~~~~~aGad~i~vh~~~~--------------~~~~~~~~~~~~~~-g~~~~~d~l~~~T~~~ 124 (218)
T 3jr2_A 70 ---DG---GAILS----RMAFEAGADWITVSAAAH--------------IATIAACKKVADEL-NGEIQIEIYGNWTMQD 124 (218)
T ss_dssp ---SC---HHHHH----HHHHHHTCSEEEEETTSC--------------HHHHHHHHHHHHHH-TCEEEEECCSSCCHHH
T ss_pred ---cc---HHHHH----HHHHhcCCCEEEEecCCC--------------HHHHHHHHHHHHHh-CCccceeeeecCCHHH
Confidence 21 12222 234468999999996421 00012222223333 555543 334467888
Q ss_pred HHHHHHcCCCeeeeh
Q 013784 282 VNAALRKGAHHVMVG 296 (436)
Q Consensus 282 a~~~l~~Gad~VmiG 296 (436)
+.++.+.|+|.+.+.
T Consensus 125 ~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 125 AKAWVDLGITQAIYH 139 (218)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHHcCccceeee
Confidence 888888899987653
No 485
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=76.75 E-value=39 Score=34.76 Aligned_cols=204 Identities=12% Similarity=0.153 Sum_probs=110.7
Q ss_pred cEEEc---CCCCCChHHHHHHHH--HcCCCcEEE-eccccchhhhhcccchhh----hhc---cCCCCCcEEEEEcCCCH
Q 013784 70 WFSVA---PMMDWTDNHYRTLAR--LISKHAWLY-TEMLAAETIIYQQGNLDR----FLA---FSPEQHPIVLQIGGSNL 136 (436)
Q Consensus 70 ~iilA---PMagvtd~~fr~~~~--~~Gg~gl~~-temv~~~~l~~~~~~~~~----~~~---~~~~~~pi~vQL~g~~p 136 (436)
|++.+ |-.|.+..+|..++. ..||++++= -|.+..+....-.+.+.. +.+ -+-+.+-..+|+.+.++
T Consensus 177 PllgtiiKPklGLsp~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~ 256 (493)
T 1bwv_A 177 PLLGCTTKPKLGLSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFTMEAVNKASAATGEVKGHYLNVTAATM 256 (493)
T ss_dssp CEEECBCSSSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTSCCEEEEECCCSSH
T ss_pred CeEEeecCCccCCCHHHHHHHHHHHHhcCCCcccCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeeccCCCCCH
Confidence 45544 778999999999873 457888652 233332222111111110 001 11233457899999999
Q ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC-------CC
Q 013784 137 DNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD-------HD 209 (436)
Q Consensus 137 ~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~-------~~ 209 (436)
+++.+=|+++.++|...+-+|..- +|. .+..+.+..+ ..++|+-. .|.|+.. .-
T Consensus 257 ~eM~~Ra~~a~e~G~~~~mvd~~~---------G~~--------a~~~l~~~~r-~~~l~lh~-HRAghga~~r~~~hGi 317 (493)
T 1bwv_A 257 EEMYARANFAKELGSVIIMIDLVI---------GYT--------AIQTMAKWAR-DNDMILHL-HRAGNSTYSRQKNHGM 317 (493)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEGGG---------CHH--------HHHHHHHHHH-HTTCEEEE-ECTTTHHHHSCTTSEE
T ss_pred HHHHHHHHHHHHhCCCeEEEeccc---------ChH--------HHHHHHHHHh-hcCcEEEe-cCCCcccccCCCCCCC
Confidence 999999999999998877666311 111 1222322222 34777655 3654321 01
Q ss_pred cHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhc------------------CC-CcEE
Q 013784 210 SYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRD------------------FP-DLTF 270 (436)
Q Consensus 210 ~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~------------------~~-~iPV 270 (436)
++. .+++++.-+|+|+|++-+--..+.|.. ......+..+... .+ -+|
T Consensus 318 s~~----Vl~Kl~RLaGaD~ih~gt~~GKleg~~--------~~~~~~~~~l~~~~~~~d~~~g~~f~q~w~~~k~v~P- 384 (493)
T 1bwv_A 318 NFR----VICKWMRMAGVDHIHAGTVVGKLEGDP--------IITRGFYKTLLLPKLERNLQEGLFFDMEWASLRKVMP- 384 (493)
T ss_dssp CHH----HHHHHHHHHTCSEEECCCSSSSSCCCH--------HHHHHHHHHHHCSEECCBTTTTBCSCEECTTCCCCEE-
T ss_pred cHH----HHHHHHHHcCCCcccccCccCccCCCH--------HHHHHHHHHHHhhhccccccCCcccccccccCCCCCc-
Confidence 222 235666778999988743211111110 0001111222221 11 234
Q ss_pred EEeCCCCCHHHHHHHHH-cCCC-eeeehHHHHhCCcch
Q 013784 271 TLNGGINTVDEVNAALR-KGAH-HVMVGRAAYQNPWYT 306 (436)
Q Consensus 271 IanGgI~s~~da~~~l~-~Gad-~VmiGRa~l~~P~lf 306 (436)
+++|||. +..+-++++ .|-| ..+.|-|.++.||=.
T Consensus 385 V~SGGih-~~~~p~l~~~~G~Dvvl~~GGG~~GHP~G~ 421 (493)
T 1bwv_A 385 VASGGIH-AGQMHQLIHYLGEDVVLQFGGGTIGHPDGI 421 (493)
T ss_dssp EEESSCC-TTSHHHHHHHHCSSCEEECSHHHHTCTTCH
T ss_pred ccccCcc-hhhHHHHHHHhCCcEEEecCccccCCCCch
Confidence 4678885 456666676 7877 456799999999953
No 486
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=76.67 E-value=52 Score=31.14 Aligned_cols=148 Identities=13% Similarity=0.140 Sum_probs=91.0
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++..+.++.+++.|+|++-+- .|.-. + ...+-+.+-.++|.+++++||.+=-
T Consensus 67 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 67 AGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVV--VPYYN--K---------PTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp TTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 346799999999999999999999999999998765 34421 1 2346677788888888899987653
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHh-hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCC-CcEEEEeCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFP-DLTFTLNGGI 276 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~-e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~-~iPVIanGgI 276 (436)
|.|.+- +.+.+ .+++ +.-.+-+|--.. | ++..+.++++..+ ++.| .+|+=
T Consensus 134 ~P~~tg~~l--~~~~~----~~La~~~pnivgiKds~------g------------d~~~~~~~~~~~~~~f~v-~~G~d 188 (294)
T 2ehh_A 134 IPSRTCVEI--SVDTM----FKLASECENIVASKEST------P------------NMDRISEIVKRLGESFSV-LSGDD 188 (294)
T ss_dssp CHHHHSCCC--CHHHH----HHHHHHCTTEEEEEECC------S------------CHHHHHHHHHHHCTTSEE-EESSG
T ss_pred CCcccCcCC--CHHHH----HHHHhhCCCEEEEEeCC------C------------CHHHHHHHHHhcCCCeEE-EECcH
Confidence 345432 23333 3333 222233332111 1 1444444444322 4444 56641
Q ss_pred CCHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 277 NTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 277 ~s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.|.+-+ -|..+.+..+
T Consensus 189 ---~~~~~~l~~G~~G~is~~an~-~P~~~~~l~~ 219 (294)
T 2ehh_A 189 ---SLTLPMMALGAKGVISVANNV-MPREVKELIR 219 (294)
T ss_dssp ---GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHH
T ss_pred ---HHHHHHHHCCCCEEEeCHHHh-hHHHHHHHHH
Confidence 235567779999999998764 3666544333
No 487
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=76.57 E-value=52 Score=31.07 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=91.1
Q ss_pred CCCCcEEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEe
Q 013784 122 PEQHPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKC 201 (436)
Q Consensus 122 ~~~~pi~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKi 201 (436)
....|+++++.+++.++..+.++.+++.|+|++-+- .|.-. + ...+-+.+-.++|.+++++||.+=-
T Consensus 67 ~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~--~---------~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 67 NGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSI--TPYYN--K---------PTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp TTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE--CCCSS--C---------CCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC--C---------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 346799999999999999999999999999998765 34421 1 2346677888888888899987643
Q ss_pred ---ccCCCCCCcHHHHHHHHHHHh-hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC
Q 013784 202 ---RIGVDDHDSYNQLCDFIYKVS-SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN 277 (436)
Q Consensus 202 ---R~G~~~~~~~~~~~~~la~~~-e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~ 277 (436)
|.|.+- +.+.+ .+++ +.-.+-+|--.. | ++..+.++++.. ++.| .+|+=
T Consensus 134 ~P~~tg~~l--~~~~~----~~La~~~pnivgiK~s~------g------------d~~~~~~~~~~~-~f~v-~~G~d- 186 (289)
T 2yxg_A 134 VPSRTAVNL--EPKTV----KLLAEEYSNISAVKEAN------P------------NLSQVSELIHDA-KITV-LSGND- 186 (289)
T ss_dssp CHHHHSCCC--CHHHH----HHHHHHCTTEEEEEECC------S------------CTHHHHHHHHHT-CSEE-EESCG-
T ss_pred CccccCcCC--CHHHH----HHHHHhCCCEEEEEeCC------C------------CHHHHHHHHHhC-CeEE-EECcH-
Confidence 345433 23333 3333 222233333111 1 133344555443 4544 56641
Q ss_pred CHHHHHHHHHcCCCeeeehHHHHhCCcchhhhhh
Q 013784 278 TVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVD 311 (436)
Q Consensus 278 s~~da~~~l~~Gad~VmiGRa~l~~P~lf~~~~~ 311 (436)
+.+...+..|++|++.|.+-+ -|..+.+-.+
T Consensus 187 --~~~~~~l~~G~~G~is~~~n~-~P~~~~~l~~ 217 (289)
T 2yxg_A 187 --ELTLPIIALGGKGVISVVANI-VPKEFVEMVN 217 (289)
T ss_dssp --GGHHHHHHTTCCEEEESGGGT-CHHHHHHHHH
T ss_pred --HHHHHHHHCCCCEEEeChhhh-hHHHHHHHHH
Confidence 335567779999999998765 3666544333
No 488
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=76.56 E-value=1.3 Score=45.85 Aligned_cols=62 Identities=16% Similarity=0.153 Sum_probs=44.1
Q ss_pred hcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCC-cEEEEeCCCCCHHHHHHHHHcCCCeeeehH
Q 013784 223 SLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPD-LTFTLNGGINTVDEVNAALRKGAHHVMVGR 297 (436)
Q Consensus 223 e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~-iPVIanGgI~s~~da~~~l~~Gad~VmiGR 297 (436)
.+.|++.+.++... |.. ...++.+..+.+..++ +||| .|+|.+.+++..+.+.|||++.+|.
T Consensus 251 ~e~gv~~l~Vd~~~----g~~--------~~~~~~i~~lk~~~~~~~~Vi-~G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 251 VEAGADVLCIDSSD----GFS--------EWQKITIGWIREKYGDKVKVG-AGNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHTCSEEEECCSC----CCS--------HHHHHHHHHHHHHHGGGSCEE-EEEECSHHHHHHHHHHTCSEEEECS
T ss_pred HhhhccceEEeccc----Ccc--------cchhhHHHHHHHhCCCCceEe-eccccCHHHHHHHHHhCCCeEEecc
Confidence 34699999886432 211 0014556556655555 7877 6999999999999999999998865
No 489
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=76.49 E-value=6.3 Score=36.44 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=55.2
Q ss_pred EEEEEcCCCHHHHHHHHHHHHHCCCCE--EEecCCC--CCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEec
Q 013784 127 IVLQIGGSNLDNLAKATELANAYNYDE--INLNCGC--PSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCR 202 (436)
Q Consensus 127 i~vQL~g~~p~~~~~aA~~~~~~G~d~--IdLN~gc--P~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR 202 (436)
+...|...|...+.+..+.+ +.|+|. +|+=-|. |+. .|| ..+++++++.++.|+.+-+-
T Consensus 3 i~pSila~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~------t~G----------~~~v~~lr~~~~~~~dvhLm 65 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNL------TLS----------PFFVSQVKKLATKPLDCHLM 65 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCC------CBC----------HHHHHHHHTTCCSCEEEEEE
T ss_pred EEeehhhCChhhHHHHHHHH-HcCCCEEEEEEEeCccCccc------hhc----------HHHHHHHHhccCCcEEEEEE
Confidence 45667777888888888888 889995 5654454 432 234 25778888877888777655
Q ss_pred cCCCCCCcHHHHHHHHHHHhhcCCccEEEEccC
Q 013784 203 IGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSR 235 (436)
Q Consensus 203 ~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgr 235 (436)
. .+.+.+. + .+.++|+|.|++|.-
T Consensus 66 v--~dp~~~i---~----~~~~aGAd~itvh~E 89 (231)
T 3ctl_A 66 V--TRPQDYI---A----QLARAGADFITLHPE 89 (231)
T ss_dssp S--SCGGGTH---H----HHHHHTCSEEEECGG
T ss_pred e--cCHHHHH---H----HHHHcCCCEEEECcc
Confidence 4 2323222 1 223589999999963
No 490
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=76.36 E-value=22 Score=35.44 Aligned_cols=145 Identities=12% Similarity=0.064 Sum_probs=87.2
Q ss_pred CCCcEEEEEc---CCCHHHHHHHHHHHHHCCCCEEEe--cCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcE
Q 013784 123 EQHPIVLQIG---GSNLDNLAKATELANAYNYDEINL--NCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPV 197 (436)
Q Consensus 123 ~~~pi~vQL~---g~~p~~~~~aA~~~~~~G~d~IdL--N~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPv 197 (436)
.++|++--+. |-+|+.+++++..+..-|.|.|-= |.+.+... -+.++..++.+.+....+.+|...
T Consensus 129 ~~RPllgtiiKPlGLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~---------p~~eR~~~~~eai~ra~~eTGe~k 199 (378)
T 3qfw_A 129 QSRALTASALKPQGLSPAALASIAHQLALGGVDLIKDDHGLADQAFS---------PFAERAAAVGKAVREANAARGGRT 199 (378)
T ss_dssp SSSCEEEEEECCTTSCHHHHHHHHHHHHHTTCSEEEECTTCSSCTTS---------CHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCceeeeeccCCcCCHHHHHHHHHHHHhcCCCcccCCcCcCCCCcc---------cHHHHHHHHHHHHHHHHHhhCCcc
Confidence 5788876654 789999999999888889998832 22222110 011233344444444444566432
Q ss_pred EEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEe----
Q 013784 198 SVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLN---- 273 (436)
Q Consensus 198 svKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIan---- 273 (436)
. .-.++.. +.+++.+. ++.+.+.|+.++-+..-+. | +..+..+.++.+++|+.+-
T Consensus 200 ~--y~~NiTa--~~~em~~r-a~~a~e~G~~~~mvd~~~~---G-------------~~a~~~l~r~~p~~~lh~HrA~~ 258 (378)
T 3qfw_A 200 L--YAPNISG--TLDDMRRQ-LGVIRDEGIGAVLVAPMIV---G-------------VSNFHAIVKEAAGLVVVAHPAMA 258 (378)
T ss_dssp E--EECBCCS--SHHHHHHH-HHHHHHHTCCEEEECHHHH---C-------------HHHHHHHHTTCTTCEEEECCTTC
T ss_pred E--EEeecCC--CHHHHHHH-HHHHHHcCCCEEEEecccc---C-------------HHHHHHHHHhCCCCEEEeCcCch
Confidence 1 2233332 46666655 3444567988877754332 2 6667777777657887653
Q ss_pred --CCCCCHHHHHHHHH-cCCCeeeehH
Q 013784 274 --GGINTVDEVNAALR-KGAHHVMVGR 297 (436)
Q Consensus 274 --GgI~s~~da~~~l~-~Gad~VmiGR 297 (436)
-||....-+.++++ .|+|.+.+|+
T Consensus 259 gahGi~~~~vl~Kl~RLaG~D~ih~gt 285 (378)
T 3qfw_A 259 GAAKIAAPLLLGRLFRLFGADATVFPN 285 (378)
T ss_dssp ---CBCHHHHHTHHHHHHTCSEEEEEC
T ss_pred hhccCcHHHHHHHHHHHhCCCcceeCC
Confidence 36654455566666 8999998774
No 491
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=76.30 E-value=60 Score=31.84 Aligned_cols=128 Identities=13% Similarity=0.102 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
+.+...+.|+.++++|+|.+-...--|.... ..|-+ + . +.-.+++..+++..|+|+..- . ++ ..+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~---~~f~g-l--g-~egl~~l~~~~~e~Gl~~~te--~-~d-~~~~--- 183 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSP---YSFQG-L--G-EKGLEYLREAADKYGMYVVTE--A-LG-EDDL--- 183 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCST---TSCCC-C--T-HHHHHHHHHHHHHHTCEEEEE--C-SS-GGGH---
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCCh---HhhcC-C--C-HHHHHHHHHHHHHcCCcEEEE--e-CC-HHHH---
Confidence 5788888999999999999887776665421 11211 1 1 333455556667789997552 1 22 2222
Q ss_pred HHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCC-CHHHHHHHHH----cC
Q 013784 215 CDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGIN-TVDEVNAALR----KG 289 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~-s~~da~~~l~----~G 289 (436)
+++ ++. +|.+.|-+|+.. ++.++.++.+ .+.||+..=|.. +.+++..+.+ .|
T Consensus 184 -~~l----~~~-vd~lkIgAr~~~---------------n~~LL~~va~--~~kPVilk~G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 184 -PKV----AEY-ADIIQIGARNAQ---------------NFRLLSKAGS--YNKPVLLKRGFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp -HHH----HHH-CSEEEECGGGTT---------------CHHHHHHHHT--TCSCEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred -HHH----HHh-CCEEEECccccc---------------CHHHHHHHHc--cCCcEEEcCCCCCCHHHHHHHHHHHHHCC
Confidence 222 234 799999887641 1667777764 389999998887 8888877765 57
Q ss_pred CCeeeeh-HHH
Q 013784 290 AHHVMVG-RAA 299 (436)
Q Consensus 290 ad~VmiG-Ra~ 299 (436)
..-|.+. ||.
T Consensus 241 N~~viLceRG~ 251 (350)
T 1vr6_A 241 NTKIILCERGI 251 (350)
T ss_dssp CCCEEEEECCB
T ss_pred CCeEEEEeCCC
Confidence 7556664 554
No 492
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=76.18 E-value=12 Score=36.06 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=57.9
Q ss_pred CCcEEEEEcC-CCHHHHHHHHHHHHHCCCCEEEecCCCCCCcccc----CCCccccc-cCChHHHHHHHHHHhhcc--CC
Q 013784 124 QHPIVLQIGG-SNLDNLAKATELANAYNYDEINLNCGCPSPKVAG----HGCFGVSL-MLDPKFVGEAMSVIAANT--NV 195 (436)
Q Consensus 124 ~~pi~vQL~g-~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r----~g~yG~~L-l~~~~~l~eiv~av~~~~--~i 195 (436)
+.|+++-+.. .+.++..+.|+.++++|+|+|.+..+.......+ ...+|+-- ........+.++.+++.+ ++
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~i 290 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRL 290 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSS
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCC
Confidence 6899999874 3556788899999999999999864421100000 00112110 011223456777777776 68
Q ss_pred cEEEEeccCCCCCCcHHHHHHHHHHHhhcCCccEEEE
Q 013784 196 PVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFII 232 (436)
Q Consensus 196 PvsvKiR~G~~~~~~~~~~~~~la~~~e~~Gvd~I~v 232 (436)
||.. .-|+. +.+++.+ .++ +|+|.|.+
T Consensus 291 pVi~--~GGI~---~~~da~~----~l~-~GAd~V~i 317 (336)
T 1f76_A 291 PIIG--VGGID---SVIAARE----KIA-AGASLVQI 317 (336)
T ss_dssp CEEE--ESSCC---SHHHHHH----HHH-HTCSEEEE
T ss_pred CEEE--ECCCC---CHHHHHH----HHH-CCCCEEEe
Confidence 8744 23443 3444443 233 69999877
No 493
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=75.99 E-value=17 Score=36.74 Aligned_cols=102 Identities=13% Similarity=0.187 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHhhc---cCCcEEEEecc--------C-CC---CCCcHHHHHHHHHHHhhcCCccEEEEccCcccccC
Q 013784 177 LDPKFVGEAMSVIAAN---TNVPVSVKCRI--------G-VD---DHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNG 241 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~---~~iPvsvKiR~--------G-~~---~~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G 241 (436)
.+.+.+.-++++|+++ +|--|.+-+.. | ++ ..-+..++.+++..++++.++.+|- . .
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE----d----P 287 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE----D----G 287 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE----C----C
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe----C----C
Confidence 3455566678999987 65434333332 0 10 0114556677666667888866554 1 1
Q ss_pred CCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCC---CCCHHHHHHHHHc-CCCeeee
Q 013784 242 ISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGG---INTVDEVNAALRK-GAHHVMV 295 (436)
Q Consensus 242 ~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGg---I~s~~da~~~l~~-Gad~Vmi 295 (436)
+++-+|+...++.+.. +.||-..|| ++++.++.++++. .||.|++
T Consensus 288 --------l~~dD~eg~~~L~~~~-~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 288 --------LSENDWAGWKLLTERL-ENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp --------SCTTCHHHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred --------CCcccHHHHHHHHHhc-CCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 2233477777776654 434433455 4499999999984 4788775
No 494
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=75.98 E-value=58 Score=31.34 Aligned_cols=105 Identities=11% Similarity=0.131 Sum_probs=60.3
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEec-cC-CCCC----------CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCC
Q 013784 177 LDPKFVGEAMSVIAANTNVPVSVKCR-IG-VDDH----------DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISP 244 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~~iPvsvKiR-~G-~~~~----------~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~ 244 (436)
.+.+...++++...+ .|+.|-.-+- +| .++. .+.++..+ ..++.|+|.+.+.=.|.. |.-.
T Consensus 110 ENi~~Tk~vv~~ah~-~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~----Fv~~TgvD~LAvaiGt~H--G~Yk 182 (305)
T 1rvg_A 110 TNVRETRRVVEAAHA-VGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARI----FMERTGADYLAVAIGTSH--GAYK 182 (305)
T ss_dssp HHHHHHHHHHHHHHH-TTCEEEEEESCCCCSCC------CCTTCCCHHHHHH----HHHHHCCSEEEECSSCCS--SSBC
T ss_pred HHHHHHHHHHHHHHH-cCCEEEEEEeeccCccCCccccccccccCCHHHHHH----HHHHHCCCEEEEecCccc--cccC
Confidence 455566666665543 3555444332 12 1211 12344444 445689999988533321 1100
Q ss_pred CCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCCC
Q 013784 245 AENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGAH 291 (436)
Q Consensus 245 ~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Gad 291 (436)
.. .-+.++++.+.++.+.. ++|++.-||=.=+++..+++. .|-+
T Consensus 183 ~~--g~p~L~~~~L~~I~~~~-~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 183 GK--GRPFIDHARLERIARLV-PAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp SS--SSCCCCHHHHHHHHHHC-CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CC--CCCccCHHHHHHHHHhc-CCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 00 11457799998988876 699999999876777777775 5543
No 495
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=75.95 E-value=32 Score=33.47 Aligned_cols=102 Identities=11% Similarity=0.132 Sum_probs=56.1
Q ss_pred CChHHHHHHHHHHhhccCCcEEEEecc--CCCC-------CCcHHHHHHHHHHHhhcCCccEEEEccCcc--cccCCCCC
Q 013784 177 LDPKFVGEAMSVIAANTNVPVSVKCRI--GVDD-------HDSYNQLCDFIYKVSSLSPTRHFIIHSRKA--LLNGISPA 245 (436)
Q Consensus 177 ~~~~~l~eiv~av~~~~~iPvsvKiR~--G~~~-------~~~~~~~~~~la~~~e~~Gvd~I~vhgrt~--~~~G~~~~ 245 (436)
.+.+...++++...+ .|+.|-.-+-. |.++ ..+.++..+ ..++.|+|.+.+.=.|. .|+..+
T Consensus 113 ENi~~Tk~vv~~ah~-~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~----Fv~~TgvD~LAvaiGt~HG~Yk~~~-- 185 (323)
T 2isw_A 113 ENVRITKEVVAYAHA-RSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKK----FVELTGVDALAVAIGTSHGAYKFKS-- 185 (323)
T ss_dssp HHHHHHHHHHHHHHT-TTCEEEEEESCC----------CCCCCHHHHHH----HHHHHCCSEEEECSSCCSSSBCCCC--
T ss_pred HHHHHHHHHHHHHHH-cCCeEEEEeCCccCCccCcccccccCCHHHHHH----HHHHHCCCEEEEecCccccccCCCC--
Confidence 455566666665433 35444333221 1121 022444444 44568999998753332 111111
Q ss_pred CCCCCCC--ccHHHHHHHHhcCCCcEEEEeCCCCCHHHHHHHHH-cCC
Q 013784 246 ENRTIPP--LKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALR-KGA 290 (436)
Q Consensus 246 ~~~~i~~--~~~~~v~~l~~~~~~iPVIanGgI~s~~da~~~l~-~Ga 290 (436)
-+. ++++.+.++.+.. ++|++.-||=.-+++..+.+. .|-
T Consensus 186 ----~p~~~L~~~~L~~I~~~~-~vpLVlHGgSsvp~~~~~~~~~~gg 228 (323)
T 2isw_A 186 ----ESDIRLAIDRVKTISDLT-GIPLVMHGSSSVPKDVKDMINKYGG 228 (323)
T ss_dssp --------CCCCHHHHHHHHHH-CSCEEECSCCCCCHHHHHHHHHTTC
T ss_pred ----CcccccCHHHHHHHHHHh-CCCeEEECCCCCCHHHHHHHHHhcc
Confidence 133 5678888887765 899999998877777777775 543
No 496
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=75.43 E-value=13 Score=35.32 Aligned_cols=104 Identities=9% Similarity=0.043 Sum_probs=57.3
Q ss_pred HHHHHHHhh-ccCCcEEEEeccCCCCCCcHHHHHHHHHHHhhc-CCccEEEEccCcccc-cCCCCCCCCCCCCccHHHHH
Q 013784 183 GEAMSVIAA-NTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSL-SPTRHFIIHSRKALL-NGISPAENRTIPPLKYEYYY 259 (436)
Q Consensus 183 ~eiv~av~~-~~~iPvsvKiR~G~~~~~~~~~~~~~la~~~e~-~Gvd~I~vhgrt~~~-~G~~~~~~~~i~~~~~~~v~ 259 (436)
.++++.+++ ..+.|+.+-+..+ +.++..+. ++.+++ +|+|+|.+|--.... .|. ...-.-+..-.+.+.
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~~-----~~~~~~~~-a~~~~~~~g~d~iei~~~~p~~~~g~--~~~g~~~~~~~eii~ 157 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAGS-----EEADYVAV-CAKIGDAANVKAIELNISCPNVKHGG--QAFGTDPEVAAALVK 157 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECCS-----SHHHHHHH-HHHHTTSTTEEEEEEECCSEEGGGTT--EEGGGCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCC-----CHHHHHHH-HHHHhccCCCCEEEEeCCCCCCCCch--hhhcCCHHHHHHHHH
Confidence 445666665 3378887766532 23344442 445566 899999998432210 110 000000001144555
Q ss_pred HHHhcCCCcEEEE--eCCCCCHHHH-HHHHHcCCCeeee
Q 013784 260 ALLRDFPDLTFTL--NGGINTVDEV-NAALRKGAHHVMV 295 (436)
Q Consensus 260 ~l~~~~~~iPVIa--nGgI~s~~da-~~~l~~Gad~Vmi 295 (436)
++.+.. ++||+. ..++.+..++ ..+.+.|+|+|.+
T Consensus 158 ~v~~~~-~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 158 ACKAVS-KVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHC-SSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHhc-CCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 555554 788875 3467776664 4455699999998
No 497
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=75.34 E-value=22 Score=37.25 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=0.0
Q ss_pred CCCCCChHHHHHHHHHc------CCCcEEEeccccchhhhhcccchhhhhccCCCCCcEEEEEcCCCH------HHHHHH
Q 013784 75 PMMDWTDNHYRTLARLI------SKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNL------DNLAKA 142 (436)
Q Consensus 75 PMagvtd~~fr~~~~~~------Gg~gl~~temv~~~~l~~~~~~~~~~~~~~~~~~pi~vQL~g~~p------~~~~~a 142 (436)
|....|-..++.+.++. +|++++..|.+..- .+.+.....++-.-.+.|+.+++...+. +.+.++
T Consensus 115 ~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~---~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~ 191 (566)
T 1q7z_A 115 PLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDI---LELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANF 191 (566)
T ss_dssp TTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCH---HHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeccCCH---HHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHH
Q ss_pred HHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCC--------CCcHHHH
Q 013784 143 TELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDD--------HDSYNQL 214 (436)
Q Consensus 143 A~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~--------~~~~~~~ 214 (436)
+..+...|++.|=+||+ -.|+.+..+++.+.+..+.|+.+.=-.|... ..+.+++
T Consensus 192 ~~~l~~~~~~avG~NC~-----------------~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~ 254 (566)
T 1q7z_A 192 AITFDELDIDALGINCS-----------------LGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDF 254 (566)
T ss_dssp HHHHHTSSCSEEEEESS-----------------SCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHH
T ss_pred HHHhhccCCCEEEEeCC-----------------CCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHH
Q ss_pred HHHHHHHhhcCCccEE
Q 013784 215 CDFIYKVSSLSPTRHF 230 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I 230 (436)
.+.+.++.+ .|+..|
T Consensus 255 a~~~~~~~~-~G~~ii 269 (566)
T 1q7z_A 255 AVHIDSYYE-LGVNIF 269 (566)
T ss_dssp HTTHHHHHH-TTCSEE
T ss_pred HHHHHHHHH-cCCcEE
No 498
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=75.23 E-value=2.4 Score=39.62 Aligned_cols=174 Identities=15% Similarity=0.163 Sum_probs=96.7
Q ss_pred EEEEEcCCCHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCC
Q 013784 127 IVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVD 206 (436)
Q Consensus 127 i~vQL~g~~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~ 206 (436)
+.|-|++.||.++...+.++.+.....|+=- .... +|-.+++...+ .++.++.+-+|.|=-|||..|..
T Consensus 90 vSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQV-------Ftga-g~trg~L~~~~---T~VNaLVSPTG~~G~VkISTGp~ 158 (275)
T 3m6y_A 90 VSIGLGAGDNRQAAVVAEIAKHYPGSHINQV-------FPSV-GATRANLGEKD---SWINSLVSPTGKVGYVNISTGPI 158 (275)
T ss_dssp EEEECCTTCGGGHHHHHHHTTTCCCSEECCB-------GGGH-HHHHHHHTTCC---CEEEEEEBCCSSTTEEECCCSTT
T ss_pred eEEecCCCCHHHHHHHHHHHHhcCCCccccc-------ccch-HHHHhhcCCCc---cEEEEEEcCCCCcceEEeccCCC
Confidence 8999999999999999999988765555311 1110 11111222111 24445556678998999999954
Q ss_pred C----C---CcHHHHHHHHHHHhhcCCccEEEEccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeCCCCCH
Q 013784 207 D----H---DSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTV 279 (436)
Q Consensus 207 ~----~---~~~~~~~~~la~~~e~~Gvd~I~vhgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanGgI~s~ 279 (436)
. . -+.+.. ..++.+.|++.|-...-. |+...+ .+..+.+...+. ++-+==.||| |.
T Consensus 159 Sas~~~~~~V~vetA----iaml~dmG~~SvKffPM~----Gl~~le-------El~avAkAca~~-g~~lEPTGGI-dl 221 (275)
T 3m6y_A 159 SAAGEEKAIVPIKTA----IALVRDMGGNSLKYFPMK----GLAHEE-------EYRAVAKACAEE-GFALEPTGGI-DK 221 (275)
T ss_dssp GGGSSSCCEEEHHHH----HHHHHHHTCCEEEECCCT----TTTTHH-------HHHHHHHHHHHH-TCEEEEBSSC-CT
T ss_pred ccccCCCceeeHHHH----HHHHHHcCCCeeeEeecC----CcccHH-------HHHHHHHHHHHc-CceECCCCCc-cH
Confidence 3 1 123332 335567899988875432 332100 133333322222 5645578998 33
Q ss_pred HHHH----HHHHcCCCeeeehHHHHhCCcchhhhhhhhhcCCCCCcccHHHHHHHHHHHHHHHHHhc
Q 013784 280 DEVN----AALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAPSSGLTRRQVVEKYQIYGDAILGTY 342 (436)
Q Consensus 280 ~da~----~~l~~Gad~VmiGRa~l~~P~lf~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 342 (436)
+.+. -+++.|+.-|| |-++...+|.. .| .||-+-+++.....+.++++|
T Consensus 222 ~Nf~~I~~i~l~aGv~~vi--------PHIYsSIIDk~-TG-----~TrpedV~~ll~~~K~l~~~~ 274 (275)
T 3m6y_A 222 ENFETIVRIALEANVEQVI--------PHVYSSIIDKE-TG-----NTKVEAVRELLAVVKKLVDQY 274 (275)
T ss_dssp TTHHHHHHHHHHTTCSCBC--------CEECGGGBCTT-TC-----CBCHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHcCCCeec--------ccccceeccCC-CC-----CCCHHHHHHHHHHHHHHHhhc
Confidence 4333 34458999888 88877666542 23 233333343333344455555
No 499
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.00 E-value=11 Score=36.73 Aligned_cols=82 Identities=17% Similarity=0.181 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhcCCccEEEE-ccCcccccCCCCCCCCCCCCccHHHHHHHHhcCCCcEEEEeC--CCCCHHHHHHHHH
Q 013784 211 YNQLCDFIYKVSSLSPTRHFII-HSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNG--GINTVDEVNAALR 287 (436)
Q Consensus 211 ~~~~~~~la~~~e~~Gvd~I~v-hgrt~~~~G~~~~~~~~i~~~~~~~v~~l~~~~~~iPVIanG--gI~s~~da~~~l~ 287 (436)
.++..+. ++.+.++|+|.|-+ ||.-- .|.+ ..+.....-.|+.+.++.+..+++|+.+-+ +....++++++.+
T Consensus 29 ~e~k~~i-~~~L~~~Gvd~IEvG~~~g~--p~ss-p~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 29 LDDVRAI-ARALDKAKVDSIEVAHGDGL--QGSS-FNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp HHHHHHH-HHHHHHHTCSEEECSCTTST--TCCB-TTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHcCCCEEEEecCCCC--CCCC-CcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHh
Confidence 4444443 45566799999999 43210 0111 111111112488888887766688887653 4567899999999
Q ss_pred cCCCeeeeh
Q 013784 288 KGAHHVMVG 296 (436)
Q Consensus 288 ~Gad~VmiG 296 (436)
.|+|.|-|.
T Consensus 105 aGvd~v~I~ 113 (345)
T 1nvm_A 105 AGARVVRVA 113 (345)
T ss_dssp HTCCEEEEE
T ss_pred CCcCEEEEE
Confidence 999999885
No 500
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=74.74 E-value=6.1 Score=37.95 Aligned_cols=78 Identities=9% Similarity=0.085 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEecCCCCCCccccCCCccccccCChHHHHHHHHHHhhccCCcEEEEeccCCCCCCcHHHH
Q 013784 135 NLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQL 214 (436)
Q Consensus 135 ~p~~~~~aA~~~~~~G~d~IdLN~gcP~~~v~r~g~yG~~Ll~~~~~l~eiv~av~~~~~iPvsvKiR~G~~~~~~~~~~ 214 (436)
+.++..++++++.++|+|+|-.+-|... |++-..+.+++.+++ +..+.++-||..-|+.. .++.
T Consensus 186 t~eei~~A~~ia~eaGADfVKTSTGf~~---------~GAT~edv~lmr~~v----~~~g~~v~VKAAGGIrt---~edA 249 (288)
T 3oa3_A 186 TADEIIAGCVLSSLAGADYVKTSTGFNG---------PGASIENVSLMSAVC----DSLQSETRVKASGGIRT---IEDC 249 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSSS---------CCCCHHHHHHHHHHH----HHSSSCCEEEEESSCCS---HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCCCCCC---------CCCCHHHHHHHHHHH----HHhCCCceEEEeCCCCC---HHHH
Confidence 5677889999999999999987765321 222223344444433 33356799999999764 4444
Q ss_pred HHHHHHHhhcCCccEEEEc
Q 013784 215 CDFIYKVSSLSPTRHFIIH 233 (436)
Q Consensus 215 ~~~la~~~e~~Gvd~I~vh 233 (436)
.++ + ++|++.|-.+
T Consensus 250 l~m----i-~aGA~RiGtS 263 (288)
T 3oa3_A 250 VKM----V-RAGAERLGAS 263 (288)
T ss_dssp HHH----H-HTTCSEEEES
T ss_pred HHH----H-HcCCceeehh
Confidence 433 2 4999988765
Done!