BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013790
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 174/295 (58%), Gaps = 18/295 (6%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
++ +ATN+F IG G FG VYK ++ A VA+K+ + QG +++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--------VALKRRTPESSQGIEEFET 84
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP--WKT 190
E++ L HP+LV LIG+C ER + +L+Y++M N +L+ HL+ P + W+
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
RL I +GAA GL YLH +I+RD K+ N+LLDENF PK++DFG++++G +G TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
V GT GY P+Y G LT KSDV+SFGVVL+E+L R ++ ++ P+ L EW
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 311 QYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ ++ + I+DP L + RK G A CL+ SS+DRP M V+ +L+
Sbjct: 258 E-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 173/295 (58%), Gaps = 18/295 (6%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
++ +ATN+F IG G FG VYK ++ A VA+K+ + QG +++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--------VALKRRTPESSQGIEEFET 84
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP--WKT 190
E++ L HP+LV LIG+C ER + +L+Y++M N +L+ HL+ P + W+
Sbjct: 85 EIETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
RL I +GAA GL YLH +I+RD K+ N+LLDENF PK++DFG++++G + TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
V GT GY P+Y G LT KSDV+SFGVVL+E+L R ++ ++ P+ L EW
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 311 QYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ ++ + I+DP L + RK G A CL+ SS+DRP M V+ +L+
Sbjct: 258 E-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 188/329 (57%), Gaps = 27/329 (8%)
Query: 65 NLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL 124
L+ FS E++ A+++FS +G GGFG VYK + ++ T+VA+K+L +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL--------ADGTLVAVKRLKEERX 75
Query: 125 QGHK-QWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-- 181
QG + Q+ EV+ + + H NL++L G+C ER LLVY +M N S+ L R
Sbjct: 76 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPE 131
Query: 182 AFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE 241
+ PPL W R I LG+A GLAYLH+ + ++I+RD KA+N+LLDE F + DFGLA+
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Query: 242 GPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
HV AV GT G+ AP+Y+ TG + K+DV+ +GV+L E++TG+R+ + R
Sbjct: 192 MD-YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 302 EQ--RLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQ 359
+ LL+WV+ + KK ++D L+ Y E ++ ++A C S +RPKMS+
Sbjct: 251 DDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE 309
Query: 360 VVERLKQIVQVSNEGDSFDKTFEEICEED 388
VV L EGD + +EE +E+
Sbjct: 310 VVRML--------EGDGLAERWEEWQKEE 330
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 185/329 (56%), Gaps = 27/329 (8%)
Query: 65 NLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL 124
L+ FS E++ A+++F +G GGFG VYK + ++ +VA+K+L +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL--------ADGXLVAVKRLKEERT 67
Query: 125 QGHK-QWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-- 181
QG + Q+ EV+ + + H NL++L G+C ER LLVY +M N S+ L R
Sbjct: 68 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPE 123
Query: 182 AFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE 241
+ PPL W R I LG+A GLAYLH+ + ++I+RD KA+N+LLDE F + DFGLA+
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Query: 242 GPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
HV AV G G+ AP+Y+ TG + K+DV+ +GV+L E++TG+R+ + R
Sbjct: 184 MD-YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 302 EQ--RLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQ 359
+ LL+WV+ + KK ++D L+ Y E ++ ++A C S +RPKMS+
Sbjct: 243 DDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSE 301
Query: 360 VVERLKQIVQVSNEGDSFDKTFEEICEED 388
VV L EGD + +EE +E+
Sbjct: 302 VVRML--------EGDGLAERWEEWQKEE 322
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 31/311 (9%)
Query: 69 FSYSEMRQATNDFSRM------LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--- 119
FS+ E++ TN+F K+GEGGFG VYK G T VA+KKL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYK---------GYVNNTTVAVKKLAAM 65
Query: 120 -NRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
+ + +Q+ E++ + +H NLV+L+G+ + DG+ LVY +M N SL D L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-DGD---DLCLVYVYMPNGSLLDRL 121
Query: 179 FN-RAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
PPL W R I GAA G+ +LHE I+RD K++N+LLDE F K+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 178
Query: 238 LAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
LAR T + + +VGT Y AP+ + G +T KSD++SFGVVL E++TG +++ +
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 237
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
R Q LL+ ++ + K +D ++ S + + +A CL + RP +
Sbjct: 238 REP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDI 294
Query: 358 SQVVERLKQIV 368
+V + L+++
Sbjct: 295 KKVQQLLQEMT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 165/311 (53%), Gaps = 31/311 (9%)
Query: 69 FSYSEMRQATNDFSRM------LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--- 119
FS+ E++ TN+F K+GEGGFG VYK G T VA+KKL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYK---------GYVNNTTVAVKKLAAM 65
Query: 120 -NRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
+ + +Q+ E++ + +H NLV+L+G+ + DG+ LVY +M N SL D L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-DGD---DLCLVYVYMPNGSLLDRL 121
Query: 179 FN-RAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
PPL W R I GAA G+ +LHE I+RD K++N+LLDE F K+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 178
Query: 238 LAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
LAR T + +VGT Y AP+ + G +T KSD++SFGVVL E++TG +++ +
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 237
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
R Q LL+ ++ + K +D ++ S + + +A CL + RP +
Sbjct: 238 REP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDI 294
Query: 358 SQVVERLKQIV 368
+V + L+++
Sbjct: 295 KKVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 164/311 (52%), Gaps = 31/311 (9%)
Query: 69 FSYSEMRQATNDFSRM------LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--- 119
FS+ E++ TN+F K+GEGGFG VYK G T VA+KKL
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYK---------GYVNNTTVAVKKLAAM 59
Query: 120 -NRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
+ + +Q+ E++ + +H NLV+L+G+ + DG+ LVY +M N SL D L
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-DGD---DLCLVYVYMPNGSLLDRL 115
Query: 179 FN-RAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
PPL W R I GAA G+ +LHE I+RD K++N+LLDE F K+SDFG
Sbjct: 116 SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 172
Query: 238 LAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
LAR + +VGT Y AP+ + G +T KSD++SFGVVL E++TG +++ +
Sbjct: 173 LARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 231
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
R Q LL+ ++ + K +D ++ S + + +A CL + RP +
Sbjct: 232 REP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDI 288
Query: 358 SQVVERLKQIV 368
+V + L+++
Sbjct: 289 KKVQQLLQEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 158/309 (51%), Gaps = 31/309 (10%)
Query: 69 FSYSEMRQATNDFSRM------LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--- 119
FS+ E++ TN+F K GEGGFG VYK G T VA+KKL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYK---------GYVNNTTVAVKKLAAM 56
Query: 120 -NRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
+ + +Q+ E++ +H NLV+L+G+ + DG+ LVY + N SL D L
Sbjct: 57 VDITTEELKQQFDQEIKVXAKCQHENLVELLGFSS-DGD---DLCLVYVYXPNGSLLDRL 112
Query: 179 FN-RAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
PPL W R I GAA G+ +LHE I+RD K++N+LLDE F K+SDFG
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 169
Query: 238 LAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
LAR + +VGT Y AP+ + G +T KSD++SFGVVL E++TG +++ +
Sbjct: 170 LARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH 228
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
R Q LL+ ++ + K +D + S + +A CL + RP +
Sbjct: 229 REP--QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTS-VEAXYSVASQCLHEKKNKRPDI 285
Query: 358 SQVVERLKQ 366
+V + L++
Sbjct: 286 KKVQQLLQE 294
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 133/295 (45%), Gaps = 27/295 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGV 139
++ +GEG FG V P DGT E +VA+K L D G Q W E+ L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGE--MVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H +++K G C GE+ +Q LV E++ SL D+L + + L
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQIC 127
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG--- 256
EG+AYLH I+R+ A NVLLD + K+ DFGLA+ P GH + G
Sbjct: 128 EGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSP 183
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADS 316
F YA P+ ++ SDVWSFGV LYE+LT S P T + LE + A
Sbjct: 184 VFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDS--SQSPPT--KFLELIGI--AQG 236
Query: 317 KKFGLIMDPRLEKEYSINEARK----IGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+ L + LE+ + K + L NC + RP ++ LK +
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 133/295 (45%), Gaps = 27/295 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGV 139
++ +GEG FG V P DGT E +VA+K L D G Q W E+ L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGE--MVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H +++K G C GE+ +Q LV E++ SL D+L + + L
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQIC 127
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG--- 256
EG+AYLH I+R+ A NVLLD + K+ DFGLA+ P GH + G
Sbjct: 128 EGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSP 183
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADS 316
F YA P+ ++ SDVWSFGV LYE+LT S P T + LE + A
Sbjct: 184 VFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDS--SQSPPT--KFLELIGI--AQG 236
Query: 317 KKFGLIMDPRLEKEYSINEARK----IGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+ L + LE+ + K + L NC + RP ++ LK +
Sbjct: 237 QMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 46/292 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG GGFG VY+ A G A A + D Q + E + +L+HPN++
Sbjct: 15 IGIGGFGKVYR-----AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP---LPWKTRLHIILGAAEGLA 203
L G C + LV EF L L + PP + W ++ A G+
Sbjct: 70 ALRGVCL----KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMN 119
Query: 204 YLHEGLEVQVIYRDFKASNVLLDE--------NFRPKLSDFGLAREGPMVGHTHVSTAVV 255
YLH+ V +I+RD K+SN+L+ + N K++DFGLARE H +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAA 175
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
G + + AP+ I + SDVWS+GV+L+E+LTG +
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF---------------RGIDGL 220
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+ +G+ M+ +L +L ++C + RP + ++++L I
Sbjct: 221 AVAYGVAMN-KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 26/256 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + R+G + ++ E + + L HP LV+L G C LV+EFM +
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFEFMEHGC 86
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 87 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 142
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 143 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E ++E + S F L PRL + + ++ ++C + +D
Sbjct: 202 PYENRSNSE--VVEDI------STGFRL-YKPRLASTH-------VYQIMNHCWKERPED 245
Query: 354 RPKMSQVVERLKQIVQ 369
RP S+++ +L +I +
Sbjct: 246 RPAFSRLLRQLAEIAE 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 128/256 (50%), Gaps = 26/256 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + R+G + ++ E + + L HP LV+L G C LV+EFM +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFEFMEHGC 88
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 89 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 144
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 145 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E ++E + S F L PRL + + ++ ++C + +D
Sbjct: 204 PYENRSNSE--VVEDI------STGFRL-YKPRLASTH-------VYQIMNHCWKERPED 247
Query: 354 RPKMSQVVERLKQIVQ 369
RP S+++ +L +I +
Sbjct: 248 RPAFSRLLRQLAEIAE 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 26/256 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + R+G + ++ E + + L HP LV+L G C LV+EFM +
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFEFMEHGC 91
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 92 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 147
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 148 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E D + PRL + + ++ ++C + +D
Sbjct: 207 PYENRSNSE---------VVEDISTGFRLYKPRLASTH-------VYQIMNHCWRERPED 250
Query: 354 RPKMSQVVERLKQIVQ 369
RP S+++ +L +I +
Sbjct: 251 RPAFSRLLRQLAEIAE 266
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 106/216 (49%), Gaps = 23/216 (10%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGV 139
++ +GEG FG V P DGT E +VA+K L G Q W E++ L
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGE--MVAVKALKEGCGPQLRSGWQREIEILRT 67
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA- 198
L H ++VK G C GE+ +Q LV E++ SL D+L P ++L A
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQ 119
Query: 199 --AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
EG+AYLH I+R A NVLLD + K+ DFGLA+ P GH + G
Sbjct: 120 QICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDG 175
Query: 257 ---TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ ++ SDVWSFGV LYE+LT
Sbjct: 176 DSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 106/216 (49%), Gaps = 23/216 (10%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGV 139
++ +GEG FG V P DGT E +VA+K L G Q W E++ L
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGE--MVAVKALKEGCGPQLRSGWQREIEILRT 66
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA- 198
L H ++VK G C GE+ +Q LV E++ SL D+L P ++L A
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQ 118
Query: 199 --AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
EG+AYLH I+R A NVLLD + K+ DFGLA+ P GH + G
Sbjct: 119 QICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDG 174
Query: 257 ---TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ ++ SDVWSFGV LYE+LT
Sbjct: 175 DSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 26/254 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + R+G + ++ E + + L HP LV+L G C LV+EFM +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFEFMEHGC 88
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 89 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKV 144
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 145 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E ++E + S F L PRL + + ++ ++C + +D
Sbjct: 204 PYENRSNSE--VVEDI------STGFRL-YKPRLASTH-------VYQIMNHCWKERPED 247
Query: 354 RPKMSQVVERLKQI 367
RP S+++ +L I
Sbjct: 248 RPAFSRLLRQLAAI 261
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGV 139
++ +GEG FG V P DGT E +VA+K L D G Q W E+ L
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGE--MVAVKALKADAGPQHRSGWKQEIDILRT 89
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H +++K G C G +Q LV E++ SL D+L + + L
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQIC 144
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG--- 256
EG+AYLH I+RD A NVLLD + K+ DFGLA+ P GH G
Sbjct: 145 EGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEXYRVREDGDSP 200
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADS 316
F YA P+ ++ SDVWSFGV LYE+LT S P T + LE + A
Sbjct: 201 VFWYA-PECLKEYKFYYASDVWSFGVTLYELLTHCDS--SQSPPT--KFLELIGI--AQG 253
Query: 317 KKFGLIMDPRLEKEYSINEARK----IGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+ L + LE+ + K + L NC + RP ++ LK +
Sbjct: 254 QMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 26/256 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + R+G + ++ E + + L HP LV+L G C LV EFM +
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVTEFMEHGC 89
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 90 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 145
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 146 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E D + PRL + + ++ ++C + +D
Sbjct: 205 PYENRSNSE---------VVEDISTGFRLYKPRLASTH-------VYQIMNHCWRERPED 248
Query: 354 RPKMSQVVERLKQIVQ 369
RP S+++ +L +I +
Sbjct: 249 RPAFSRLLRQLAEIAE 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
VAIK + ++G ++ E + + L HP LV+L G C LV+EFM +
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQA----PICLVFEFMEHGC 108
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D+L + +T L + L EG+AYL E VI+RD A N L+ EN K+
Sbjct: 109 LSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 164
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS 293
SDFG+ R +T ST +A+P+ ++KSDVWSFGV+++E+ + +
Sbjct: 165 SDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
NR +E ++E + S F L PRL + + ++ ++C + +D
Sbjct: 224 PYENRSNSE--VVEDI------STGFRL-YKPRLASTH-------VYQIMNHCWKERPED 267
Query: 354 RPKMSQVVERLKQIVQ 369
RP S+++ +L +I +
Sbjct: 268 RPAFSRLLRQLAEIAE 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
D + K+G G FG VY+ K + VA+K L D ++ ++++ E +
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EEFLKEAAVMK 62
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPNLV+L+G C R ++ EFM +L D+L + L++
Sbjct: 63 EIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT- 257
+ + YL + I+RD A N L+ EN K++DFGL+R M G T TA G
Sbjct: 119 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT--XTAHAGAK 171
Query: 258 --FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPA 314
+ AP+ + + KSDVW+FGV+L+E+ T G P LLE
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE------- 224
Query: 315 DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNEG 374
D R+E+ E K+ L C + DRP +++ + + + Q S+
Sbjct: 225 --------KDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 274
Query: 375 DSFDK 379
D +K
Sbjct: 275 DEVEK 279
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 50/306 (16%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA---- 132
A N+ +IG+GGFG V+K G + +VVAIK L +G + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHK-------GRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 133 ---EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
EV + L HPN+VKL G +V EF+ L L ++A P + W
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWS 122
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DEN--FRPKLSDFGLAREGPM 244
+L ++L A G+ Y+ + +++RD ++ N+ L DEN K++DFGL+++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-- 179
Query: 245 VGHTHVSTAVVGTFGYAAPDYI--ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE 302
H + ++G F + AP+ I E T K+D +SF ++LY +LTG +
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------- 229
Query: 303 QRLLEWVQQYPADSKKF-GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
+Y KF +I + L + ++ + + C S K RP S +V
Sbjct: 230 --------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 362 ERLKQI 367
+ L ++
Sbjct: 282 KELSEL 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 136/292 (46%), Gaps = 42/292 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 31 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 77
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ +GY Q +V ++ SL HL + + K + I A
Sbjct: 78 RHVNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTAR 131
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G+ YLH +I+RD K++N+ L E+ K+ DFGLA E +H + G+ +
Sbjct: 132 GMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 261 AAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSK 317
AP+ I ++ + +SDV++FG+VLYE++TG+ L + +++E V +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS---- 242
Query: 318 KFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ P L K S N +++ RL CL K +RP +++ ++++ +
Sbjct: 243 -----LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 56
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 107
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 108 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 164
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 165 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 212
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 213 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 265
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 266 AFETMFQESSISDEVEK 282
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 57
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 108
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 109 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 165
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 166 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 213
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 214 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 267 AFETMFQESSISDEVEK 283
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 36/303 (11%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
D + K+G G +G VY+ K + VA+K L D ++ ++++ E +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EEFLKEAAVMK 62
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPNLV+L+G C R ++ EFM +L D+L + L++
Sbjct: 63 EIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG-T 257
+ + YL + I+RD A N L+ EN K++DFGL+R M G T + A
Sbjct: 119 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTFTAHAGAKFP 173
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADS 316
+ AP+ + + KSDVW+FGV+L+E+ T G P LLE
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------- 224
Query: 317 KKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNEGDS 376
D R+E+ E K+ L C + DRP +++ + + + Q S+ D
Sbjct: 225 ------KDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
Query: 377 FDK 379
+K
Sbjct: 277 VEK 279
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAV 111
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+RD A N L+ EN K++DFGL+R M G T+
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTY 166
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 211
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 212 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 268 TMFQESSISDEVEK 281
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAV 111
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+RD A N L+ EN K++DFGL+R M G T+
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTY 166
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 211
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 212 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 268 TMFQESSISDEVEK 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 60
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+RD A N L+ EN K++DFGL+R M G T+
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTY 171
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 216
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 217 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 273 TMFQESSISDEVEK 286
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAV 111
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+RD A N L+ EN K++DFGL+R M G T+
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTY 166
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 211
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 212 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 268 TMFQESSISDEVEK 281
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 60
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 112 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 216
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 217 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 270 AFETMFQESSISDEVEK 286
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 57
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 108
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 109 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 165
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 213
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 214 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 267 AFETMFQESSISDEVEK 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 57
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 108
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 109 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 165
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 213
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 214 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 267 AFETMFQESSISDEVEK 283
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 68
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 119
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 120 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 176
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 177 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 224
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 225 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 277
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 278 AFETMFQESSISDEVEK 294
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAV 111
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+RD A N L+ EN K++DFGL+R M G T+
Sbjct: 112 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTY 166
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 211
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 212 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 268 TMFQESSISDEVEK 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 136/292 (46%), Gaps = 42/292 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 31 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 77
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ +GY Q +V ++ SL HL + + K + I A
Sbjct: 78 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTAR 131
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G+ YLH +I+RD K++N+ L E+ K+ DFGLA E +H + G+ +
Sbjct: 132 GMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 261 AAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSK 317
AP+ I ++ + +SDV++FG+VLYE++TG+ L + +++E V +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS---- 242
Query: 318 KFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ P L K S N +++ RL CL K +RP +++ ++++ +
Sbjct: 243 -----LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 50/319 (15%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 56
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQ----- 107
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 108 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 164
Query: 247 HTHVSTAVVGT---FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
T TA G + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 165 DT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 212
Query: 304 RLLEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQV 360
YP S+ + L+ D R+E+ E K+ L C + DRP +++
Sbjct: 213 -------PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEI 263
Query: 361 VERLKQIVQVSNEGDSFDK 379
+ + + Q S+ D +K
Sbjct: 264 HQAFETMFQESSISDEVEK 282
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 50/306 (16%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA---- 132
A N+ +IG+GGFG V+K G + +VVAIK L +G + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHK-------GRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 133 ---EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
EV + L HPN+VKL G +V EF+ L L ++A P + W
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWS 122
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DEN--FRPKLSDFGLAREGPM 244
+L ++L A G+ Y+ + +++RD ++ N+ L DEN K++DFG +++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-- 179
Query: 245 VGHTHVSTAVVGTFGYAAPDYI--ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE 302
H + ++G F + AP+ I E T K+D +SF ++LY +LTG +
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------- 229
Query: 303 QRLLEWVQQYPADSKKF-GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
+Y KF +I + L + ++ + + C S K RP S +V
Sbjct: 230 --------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 362 ERLKQI 367
+ L ++
Sbjct: 282 KELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 50/306 (16%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA---- 132
A N+ +IG+GGFG V+K G + +VVAIK L +G + +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHK-------GRLVKDKSVVAIKSLILGDSEGETEMIEKFQE 69
Query: 133 ---EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
EV + L HPN+VKL G +V EF+ L L ++A P + W
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHP-IKWS 122
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DEN--FRPKLSDFGLAREGPM 244
+L ++L A G+ Y+ + +++RD ++ N+ L DEN K++DF L+++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-- 179
Query: 245 VGHTHVSTAVVGTFGYAAPDYI--ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE 302
H + ++G F + AP+ I E T K+D +SF ++LY +LTG +
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------- 229
Query: 303 QRLLEWVQQYPADSKKF-GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
+Y KF +I + L + ++ + + C S K RP S +V
Sbjct: 230 --------EYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281
Query: 362 ERLKQI 367
+ L ++
Sbjct: 282 KELSEL 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 43/303 (14%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
D + K+G G +G VY+ K + VA+K L D ++ ++++ E +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EEFLKEAAVMK 62
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPNLV+L+G C R ++ EFM +L D+L + L++
Sbjct: 63 EIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT- 257
+ + YL + I+RD A N L+ EN K++DFGL+R M G T TA G
Sbjct: 119 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDT--XTAHAGAK 171
Query: 258 --FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPA 314
+ AP+ + + KSDVW+FGV+L+E+ T G P LLE
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE------- 224
Query: 315 DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ---VS 371
D R+E+ E K+ L C + DRP +++ + + + Q +S
Sbjct: 225 --------KDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 274
Query: 372 NEG 374
+EG
Sbjct: 275 DEG 277
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 41/323 (12%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIK-PAAGDGTSEATVV 114
PE YE+ + F+ E+ + R+ IG G FG V +K P D V
Sbjct: 23 PETYEDPNRAVHQFA-KELDASCIKIERV--IGAGEFGEVCSGRLKLPGKRD-----VAV 74
Query: 115 AIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
AIK L + ++ ++ E +G +HPN+V L G RG ++V EFM N +
Sbjct: 75 AIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPVMIVIEFMENGA 130
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D + + ++ G A G+ YL ++ ++RD A N+L++ N K+
Sbjct: 131 L-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKV 186
Query: 234 SDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT- 289
SDFGL+R + P +T + + AP+ I+ T+ SDVWS+G+V++E+++
Sbjct: 187 SDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 244
Query: 290 GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSK 349
G R + + +E + PA ++ + +L +C K
Sbjct: 245 GERPYWDMSNQDVIKAIEEGYRLPA-----------------PMDCPAGLHQLMLDCWQK 287
Query: 350 SSKDRPKMSQVVERLKQIVQVSN 372
+RPK Q+V L ++++ N
Sbjct: 288 ERAERPKFEQIVGILDKMIRNPN 310
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 301
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 352
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+R+ A N L+ EN K++DFGL+R M G
Sbjct: 353 -EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTG 409
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 410 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 457
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 458 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 510
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 511 AFETMFQESSISDEVEK 527
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 40/314 (12%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 262
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
++ E + ++HPNLV+L+G C R ++ EFM +L D+L +
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
L++ + + YL + I+R+ A N L+ EN K++DFGL+R M G T+
Sbjct: 319 VLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTY 373
Query: 250 VSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
+ A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------- 418
Query: 309 VQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP S+ + L+ D R+E+ E K+ L C + DRP +++ + +
Sbjct: 419 --PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 474
Query: 366 QIVQVSNEGDSFDK 379
+ Q S+ D +K
Sbjct: 475 TMFQESSISDEVEK 488
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 46/317 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 259
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 310
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+R+ A N L+ EN K++DFGL+R M G
Sbjct: 311 -EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSR--LMTG 367
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 368 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 415
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 416 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 468
Query: 363 RLKQIVQVSNEGDSFDK 379
+ + Q S+ D +K
Sbjct: 469 AFETMFQESSISDEVEK 485
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 145/319 (45%), Gaps = 45/319 (14%)
Query: 69 FSYSEMRQATNDFSRMLKI---------GEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL 119
F++ + +A +F++ + I G G FG V +K VAIK L
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPG----KREIFVAIKTL 69
Query: 120 NRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
+ ++ +++E +G +HPN++ L G + +++ EFM N SL D
Sbjct: 70 KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEFMENGSL-DSF 124
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
+ + ++ G A G+ YL + + ++RD A N+L++ N K+SDFGL
Sbjct: 125 LRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 239 AR--EGPMVGHTHVSTAVVGTFG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRS 293
+R E T+ S A+ G + AP+ I+ T+ SDVWS+G+V++E+++ G R
Sbjct: 182 SRFLEDDTSDPTYTS-ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
T Q ++ ++Q D RL A + +L +C K
Sbjct: 241 YWD---MTNQDVINAIEQ------------DYRLPPPMDCPSA--LHQLMLDCWQKDRNH 283
Query: 354 RPKMSQVVERLKQIVQVSN 372
RPK Q+V L ++++ N
Sbjct: 284 RPKFGQIVNTLDKMIRNPN 302
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 46/309 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 59
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 110
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 111 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 167
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 215
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 216 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 268
Query: 363 RLKQIVQVS 371
+ + Q S
Sbjct: 269 AFETMFQES 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 123/282 (43%), Gaps = 46/282 (16%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQW---VAEVQFL 137
FS + +IG G FG+VY + + VVAIKK++ G Q +++W + EV+FL
Sbjct: 17 FSDLREIGHGSFGAVYFAR-------DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILG 197
L HPN ++ G C + R LV E+ L + + L PL + G
Sbjct: 70 QKLRHPNTIQYRG-CYL---REHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHG 123
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-EGPMVGHTHVSTAVVG 256
A +GLAYLH +I+RD KA N+LL E KL DFG A P + VG
Sbjct: 124 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVG 173
Query: 257 TFGYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYP 313
T + AP+ I + G K DVWS G+ E+ ER P + +
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMSALYHIA 227
Query: 314 ADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRP 355
+ P L+ + R D+CL K +DRP
Sbjct: 228 QNES-------PALQSGHWSEYFRN---FVDSCLQKIPQDRP 259
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 46/307 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ G + VA+K L D ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYE-------GVWKKYSLTVAVKTLKEDTMEV-EE 60
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIIIEFMTYGNLLDYLRECNRQ----- 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 112 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 216
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 217 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 363 RLKQIVQ 369
+ + Q
Sbjct: 270 AFETMFQ 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 46/309 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ G + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYE-------GVWKKYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 106
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 107 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 163
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 211
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 212 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 363 RLKQIVQVS 371
+ + Q S
Sbjct: 265 AFETMFQES 273
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 122/281 (43%), Gaps = 44/281 (15%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQW---VAEVQFL 137
FS + +IG G FG+VY + + VVAIKK++ G Q +++W + EV+FL
Sbjct: 56 FSDLREIGHGSFGAVYFAR-------DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILG 197
L HPN ++ G C + R LV E+ L + + L PL + G
Sbjct: 109 QKLRHPNTIQYRG-CYL---REHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAAVTHG 162
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A +GLAYLH +I+RD KA N+LL E KL DFG A + VGT
Sbjct: 163 ALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGT 213
Query: 258 FGYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPA 314
+ AP+ I + G K DVWS G+ E+ ER P + +
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMSALYHIAQ 267
Query: 315 DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRP 355
+ P L+ + R D+CL K +DRP
Sbjct: 268 NES-------PALQSGHWSEYFRN---FVDSCLQKIPQDRP 298
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 46/307 (14%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 60
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 112 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 216
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
YP S+ + L+ D R+E+ E K+ L C + DRP +++ +
Sbjct: 217 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 363 RLKQIVQ 369
+ + Q
Sbjct: 270 AFETMFQ 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 42/292 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 19 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 65
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ +GY Q +V ++ SL HL + + K + I A
Sbjct: 66 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTAR 119
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+ +
Sbjct: 120 GMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 261 AAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSK 317
AP+ I ++ + +SDV++FG+VLYE++TG+ L + +++E V +
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGS---- 230
Query: 318 KFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ P L K S N +++ RL CL K +RP +++ ++++ +
Sbjct: 231 -----LSPDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 106/227 (46%), Gaps = 26/227 (11%)
Query: 74 MRQATNDFSRMLK----IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
MR T R LK +G+G FGSV P D T E VVA+KKL + +
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRD 57
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
+ E++ L L+H N+VK G C G R ++ L+ E++ SL D+L K
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------K 108
Query: 190 TRL-HIIL-----GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGP 243
R+ HI L +G+ YL + I+RD N+L++ R K+ DFGL + P
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165
Query: 244 MVGH-THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + AP+ + + SDVWSFGVVLYE+ T
Sbjct: 166 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 72 SEMRQATNDFSRMLK----IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH 127
SE R T R LK +G+G FGSV P D T E VVA+KKL +
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHL 58
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
+ + E++ L L+H N+VK G C G R ++ L+ E++ SL D+L
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH------ 110
Query: 188 WKTRL-HIIL-----GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE 241
K R+ HI L +G+ YL + I+RD N+L++ R K+ DFGL +
Sbjct: 111 -KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKV 166
Query: 242 GPMVGH-THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
P V + AP+ + + SDVWSFGVVLYE+ T
Sbjct: 167 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 142/311 (45%), Gaps = 50/311 (16%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 60
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 112 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 168
Query: 247 HTHVSTAVVGT---FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
T TA G + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 169 DT--XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 304 RLLEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQV 360
YP S+ + L+ D R+E+ E K+ L C + DRP +++
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEI 267
Query: 361 VERLKQIVQVS 371
+ + + Q S
Sbjct: 268 HQAFETMFQES 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 69 FSYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL 119
F++ + QA +F++ + IG G FG V +K VAIK L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPG----KREICVAIKTL 65
Query: 120 NRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL 178
++ +++E +G +HPN++ L G + +++ E+M N SL D
Sbjct: 66 KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITEYMENGSL-DAF 120
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
+ + ++ G G+ YL + + ++RD A N+L++ N K+SDFG+
Sbjct: 121 LRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 239 AR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSL 294
+R + P +T + + AP+ I T+ SDVWS+G+V++E+++ G R
Sbjct: 178 SRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Query: 295 ERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDR 354
+ Q +++ +++ G + P ++ ++++ L +C K DR
Sbjct: 236 ---WDMSNQDVIKAIEE--------GYRLPPPMDCPIALHQ------LMLDCWQKERSDR 278
Query: 355 PKMSQVVERLKQIVQVSN 372
PK Q+V L ++++ N
Sbjct: 279 PKFGQIVNMLDKLIRNPN 296
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 37 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 146 VKLIGYCA-VDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+ L+G C +G L+V +M + L + + N P K + L A+G+ Y
Sbjct: 93 LSLLGICLRSEGSP----LVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 147
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAA 262
L + ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL--- 255
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 256 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QW 130
+A + + +IGEG +G V+K A D + VA+K++ + G +G +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
VA ++ L EHPN+V+L C V +R + LV+E + ++ L +L P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +V++RD K N+L+ + + KL+DFGLAR +
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
T+VV T Y AP+ + D+WS G + EM R+ L R +Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QW 130
+A + + +IGEG +G V+K A D + VA+K++ + G +G +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
VA ++ L EHPN+V+L C V +R + LV+E + ++ L +L P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +V++RD K N+L+ + + KL+DFGLAR +
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
T+VV T Y AP+ + D+WS G + EM R+ L R +Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 73 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 123
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 124 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 98/205 (47%), Gaps = 10/205 (4%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VK G C G R ++ L+ E++ SL D+L A + L +G+ YL
Sbjct: 77 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYTSQICKGMEYL 133
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTFGYAAPD 264
+ I+RD N+L++ R K+ DFGL + P V + AP+
Sbjct: 134 GTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 265 YIETGHLTAKSDVWSFGVVLYEMLT 289
+ + SDVWSFGVVLYE+ T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QW 130
+A + + +IGEG +G V+K A D + VA+K++ + G +G +
Sbjct: 8 RADQQYECVAEIGEGAYGKVFK------ARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
VA ++ L EHPN+V+L C V +R + LV+E + ++ L +L P +P +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTE 120
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +V++RD K N+L+ + + KL+DFGLAR +
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQM 174
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
T+VV T Y AP+ + D+WS G + EM R+ L R +Q
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 78 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 128
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 129 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 46/298 (15%)
Query: 70 SYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
+Y + D + K+G G +G VY+ K + VA+K L D ++ ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-------KYSLTVAVKTLKEDTMEV-EE 55
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLP 187
++ E + ++HPNLV+L+G C R ++ EFM +L D+L NR
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCT----REPPFYIITEFMTYGNLLDYLRECNRQ----- 106
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQ-VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ ++L A ++ E LE + I+RD A N L+ EN K++DFGL+R M G
Sbjct: 107 -EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTG 163
Query: 247 HTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------ 211
Query: 306 LEWVQQYPAD--SKKFGLI-MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQV 360
YP S+ + L+ D R+E+ E K+ L C + DRP +++
Sbjct: 212 -----PYPGIDLSQVYELLEKDYRMERPEGCPE--KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 72 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 122
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 123 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+G G FG V+ + +T VA+K L + G + ++ E + L+H L
Sbjct: 19 KLGAGQFGEVWMGYY--------NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKL 69
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E I ++ EFM SL D L + + + AEG+AY+
Sbjct: 70 VRL--YAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
I+RD +A+NVL+ E+ K++DFGLAR V + TA G + A
Sbjct: 126 ERK---NYIHRDLRAANVLVSESLMCKIADFGLAR----VIEDNEYTAREGAKFPIKWTA 178
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT 289
P+ I G T KS+VWSFG++LYE++T
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 33 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ YL
Sbjct: 89 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKYL 144
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 145 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 251
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 252 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 79 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 129
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 130 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 38 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 146 VKLIGYCA-VDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+ L+G C +G L+V +M + L + + N P K + L A+G+ Y
Sbjct: 94 LSLLGICLRSEGSP----LVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 148
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAA 262
L + ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL--- 256
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 36 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ YL
Sbjct: 92 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKYL 147
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 254
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 255 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 30 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ YL
Sbjct: 86 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKYL 141
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 142 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 248
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 249 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 115/221 (52%), Gaps = 23/221 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQW-VAEVQ 135
+++ F ++ K+G G + +VYK G + VA+K++ D +G + E+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYK-------GLNKTTGVYVALKEVKLDSEEGTPSTAIREIS 55
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
+ L+H N+V+L Y + E + LV+EFM N L+ ++ +R P L+++
Sbjct: 56 LMKELKHENIVRL--YDVIHTENKLT--LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLV 110
Query: 196 ----LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+GLA+ HE ++++RD K N+L+++ + KL DFGLAR + +T S
Sbjct: 111 KYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 252 TAVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y APD + + S D+WS G +L EM+TG+
Sbjct: 168 EVV--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 80 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 130
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 131 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 57 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 146 VKLIGYCA-VDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+ L+G C +G L+V +M + L + + N P K + L A+G+ Y
Sbjct: 113 LSLLGICLRSEGSP----LVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 167
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAA 262
L + ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL--- 275
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 276 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 35 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ YL
Sbjct: 91 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKYL 146
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 147 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 253
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 254 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 105 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 155
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 156 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 74 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 124
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 125 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 56 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ YL
Sbjct: 112 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKYL 167
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 168 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 274
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 275 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 38 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 146 VKLIGYCA-VDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+ L+G C +G L+V +M + L + + N P K + L A+G+ Y
Sbjct: 94 LSLLGICLRSEGSP----LVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 148
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAA 262
L + ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL--- 256
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 257 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 37 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 146 VKLIGYCA-VDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+ L+G C +G L+V +M + L + + N P K + L A+G+ Y
Sbjct: 93 LSLLGICLRSEGSP----LVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKY 147
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAA 262
L + ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL--- 255
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 256 ----LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 81 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 131
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 132 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ EF+ SL ++L K R+ HI L
Sbjct: 77 VKYKGVCYSAGRRNLK--LIMEFLPYGSLREYLQKH-------KERIDHIKLLQYTSQIC 127
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 128 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 92 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 142
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 143 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 111/237 (46%), Gaps = 38/237 (16%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEA-TVVAIKKLNRDG---LQGHKQWVAEV 134
N+ + IGEG FG V+++ A G E T+VA+K L + +Q Q E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQAR---APGLLPYEPFTMVAVKMLKEEASADMQADFQ--REA 101
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LN---RSLEDH---------L 178
+ ++PN+VKL+G CAV G L++E+M LN RS+ H L
Sbjct: 102 ALMAEFDNPNIVKLLGVCAV----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 179 FNRA------FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPK 232
RA PPL +L I A G+AYL E + ++RD N L+ EN K
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVK 214
Query: 233 LSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
++DFGL+R + + P+ I T +SDVW++GVVL+E+ +
Sbjct: 215 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 41/309 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSNEGDSFD 378
++ + D
Sbjct: 319 LTTNEEYLD 327
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 97 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 153 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL 208
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 209 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 315
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 316 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 39 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 95 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 257
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 258 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 36 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 92 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 147
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 254
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 255 ---LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAI 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + +T VA+K L + G + ++ E + L+H L
Sbjct: 20 RLGAGQFGEVWMGYY--------NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKL 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E I ++ E+M SL D L + + + AEG+AY+
Sbjct: 71 VRL--YAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
I+RD +A+NVL+ E+ K++DFGLAR V + TA G + A
Sbjct: 127 ERK---NYIHRDLRAANVLVSESLMCKIADFGLAR----VIEDNEYTAREGAKFPIKWTA 179
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT 289
P+ I G T KSDVWSFG++LYE++T
Sbjct: 180 PEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 38 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 256
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 257 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 43 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 99 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 154
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 155 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 261
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 262 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 92 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 142
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 143 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 39 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 95 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 257
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 258 ---LQPEYCPDPLYEV---MLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F +Y + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
+M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGL+R + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHPNL 145
IG G FG VY ++ D + A+K LNR G Q++ E + HPN+
Sbjct: 38 IGRGHFGCVYHGTLL----DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L+G C L+V +M + L + + N P K + L A+G+ +L
Sbjct: 94 LSLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGTFGYAAP 263
+ ++RD A N +LDE F K++DFGLAR+ H T + A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIM 323
+ ++T T KSDVWSFGV+L+E++T R P + Y ++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT------RGAPPYPDVNTFDITVYLLQGRRL---- 256
Query: 324 DPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
L+ EY + ++ C ++ RP S++V R+ I
Sbjct: 257 ---LQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAI 294
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 74 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 124
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH-THVSTAVVGTF 258
+G+ YL + I+RD N+L++ R K+ DFGL + P V
Sbjct: 125 KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 41/309 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSNEGDSFD 378
++ + D
Sbjct: 319 LTTNEEYLD 327
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++GEG FG V+ + + + +VA+K L K + E + L L+H ++
Sbjct: 20 ELGEGAFGKVFLAECYNLCPE--QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-----LFNRAFPP--LPWKTRLHI 194
VK G C V+G+ I +V+E+M LN+ L H L PP L LHI
Sbjct: 78 VKFYGVC-VEGDPLI---MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
A G+ YL ++RD N L+ EN K+ DFG++R+ + V
Sbjct: 134 AQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ + P+ I T +SDVWS GVVL+E+ T
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P D T E VVA+KKL + + + E++ L L+H N+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQ-DNTGE--VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL-HIIL-----GAA 199
VK G C G R ++ L+ E++ SL D+L K R+ HI L
Sbjct: 75 VKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKH-------KERIDHIKLLQYTSQIC 125
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH-VSTAVVGTF 258
+G+ YL + I+R+ N+L++ R K+ DFGL + P + V
Sbjct: 126 KGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ + + SDVWSFGVVLYE+ T
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 39/319 (12%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVA 115
P YE+ V +++ ATN S +G G FG V +K + S VA
Sbjct: 25 PHTYEDPTQT--VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS----VA 77
Query: 116 IKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL 174
IK L + ++ ++ E +G +HPN+++L G + ++V E+M N SL
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL 133
Query: 175 EDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLS 234
D + + ++ G A G+ YL + + ++RD A N+L++ N K+S
Sbjct: 134 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 235 DFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-G 290
DFGL+R + P +T + + +P+ I T+ SDVWS+G+VL+E+++ G
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 291 RRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKS 350
R + Q +++ V + G + P ++ ++ + L +C K
Sbjct: 248 ERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LMLDCWQKD 290
Query: 351 SKDRPKMSQVVERLKQIVQ 369
+RPK Q+V L ++++
Sbjct: 291 RNNRPKFEQIVSILDKLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 147/319 (46%), Gaps = 39/319 (12%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVA 115
P YE+ V +++ ATN S +G G FG V +K + S VA
Sbjct: 23 PHTYEDPTQT--VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS----VA 75
Query: 116 IKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL 174
IK L + ++ ++ E +G +HPN+++L G + ++V E+M N SL
Sbjct: 76 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL 131
Query: 175 EDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLS 234
D + + ++ G A G+ YL + + ++RD A N+L++ N K+S
Sbjct: 132 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 187
Query: 235 DFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-G 290
DFGL+R + P +T + + +P+ I T+ SDVWS+G+VL+E+++ G
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 291 RRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKS 350
R + Q +++ V + G + P ++ ++ + L +C K
Sbjct: 246 ERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LMLDCWQKD 288
Query: 351 SKDRPKMSQVVERLKQIVQ 369
+RPK Q+V L ++++
Sbjct: 289 RNNRPKFEQIVSILDKLIR 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F ++ + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
+M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGLAR + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 15 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 61
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 62 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 113
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA E +H + G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 226
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 227 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 35 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 81
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 82 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 133
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA E +H + G+
Sbjct: 134 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 246
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 247 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 43 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 89
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 90 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 141
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA E +H + G+
Sbjct: 142 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 254
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 255 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M +DF ++ ++G G G V+K S KP+ + + IK R+ Q + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRE 54
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+Q L P +V G DGE I E M SL D + +A +P +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGK 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ + +GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANS 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQR-------LL 306
VGT Y +P+ ++ H + +SD+WS G+ L EM GR + K + R LL
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELL 222
Query: 307 EWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
+++ P G+ LE + +N+ CL K+ +R + Q++
Sbjct: 223 DYIVNEPPPKLPSGVF---SLEFQDFVNK----------CLIKNPAERADLKQLM 264
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 51
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+D + A +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKDFMDASALTGIPLPLIK 106
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSN 372
++
Sbjct: 319 LTT 321
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 43/304 (14%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP---------------LPWK 189
++ L+G C DG + + E+ +L ++L R PP + +K
Sbjct: 103 IITLLGACTQDGPLYV----IVEYASKGNLREYLRARR-PPGMEYSYDINRVPEEQMTFK 157
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------ 268
Query: 310 QQYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIV 368
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 ---------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317
Query: 369 QVSN 372
++
Sbjct: 318 TLTT 321
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSN 372
++
Sbjct: 319 LTT 321
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IIHLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSN 372
++
Sbjct: 319 LTT 321
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 43/304 (14%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP---------------LPWK 189
++ L+G C DG + + E+ +L ++L R PP + +K
Sbjct: 90 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARR-PPGMEYSYDINRVPEEQMTFK 144
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 145 DLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------ 255
Query: 310 QQYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIV 368
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 256 ---------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 304
Query: 369 QVSN 372
++
Sbjct: 305 TLTT 308
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G G FG V K+ + A VAIK++ + + K ++ E++ L + HPN+V
Sbjct: 16 VGRGAFGVVCKAKWR---------AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII---LGAAEGLA 203
KL G C LV E+ SL + L PLP+ T H + L ++G+A
Sbjct: 65 KLYGACLNP------VCLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVA 116
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
YLH +I+RD K N+LL K+ DFG A + TH+ T G+ + A
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHM-TNNKGSAAWMA 171
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ E + + K DV+S+G++L+E++T R+ E P R++ V
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAVHNG--------- 220
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
P L K N + I L C SK RP M ++V+ + +++
Sbjct: 221 -TRPPLIK----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 45/288 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G G FG V K+ + A VAIK++ + + K ++ E++ L + HPN+V
Sbjct: 17 VGRGAFGVVCKAKWR---------AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII---LGAAEGLA 203
KL G C LV E+ SL + L PLP+ T H + L ++G+A
Sbjct: 66 KLYGACLNP------VCLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVA 117
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
YLH +I+RD K N+LL K+ DFG A + TH+ T G+ + A
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHM-TNNKGSAAWMA 172
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ E + + K DV+S+G++L+E++T R+ E P R++ V
Sbjct: 173 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAVHNG--------- 221
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
P L K N + I L C SK RP M ++V+ + +++
Sbjct: 222 -TRPPLIK----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 149 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 314
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 315 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
Query: 370 VSN 372
++
Sbjct: 365 LTT 367
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 43/304 (14%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP---------------LPWK 189
++ L+G C DG + + E+ +L ++L R PP + +K
Sbjct: 95 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARR-PPGMEYSYDINRVPEEQMTFK 149
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 150 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------ 260
Query: 310 QQYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIV 368
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 261 ---------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 309
Query: 369 QVSN 372
++
Sbjct: 310 TLTT 313
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 92 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN K++DFGLAR+ + +
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 257
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 258 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 370 VSN 372
++
Sbjct: 308 LTT 310
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F ++ + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
+M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGL+R + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 53
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L+ L+D + A +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LSMDLKDFMDASALTGIPLPLIK 108
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 166 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 136/309 (44%), Gaps = 41/309 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 266 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 370 VSNEGDSFD 378
+++ + D
Sbjct: 312 LTSNQEYLD 320
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L+ L+D + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LSMDLKDFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP--------------PLPWKT 190
++ L+G C DG + + E+ +L ++L R P + +K
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ EN +++DFGLAR+ + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ 310
+T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------- 268
Query: 311 QYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
F L+ + R++K N ++ + +C RP Q+VE L +I+
Sbjct: 269 --------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 370 VSN 372
++
Sbjct: 319 LTT 321
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGV 139
R+ +GEG FG V P GD T E VA+K L + H E++ L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPE-GDNTGEQ--VAVKSLKPESGGNHIADLKKEIEILRN 79
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G C DG GI+ L+ EF+ + SL+++L + + K +L +
Sbjct: 80 LYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQIC 136
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVSTAVVGT 257
+G+ YL Q ++RD A NVL++ + K+ DFGL + E T
Sbjct: 137 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ + SDVWSFGV L+E+LT
Sbjct: 194 FWYA-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 149/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F ++ + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
+M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGL+R + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 136/309 (44%), Gaps = 41/309 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-----------FNRAFPP---LPWKT 190
++ L+G C DG + + E+ +L ++L FN + P L K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 266 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 370 VSNEGDSFD 378
+++ + D
Sbjct: 312 LTSNQEXLD 320
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNL 145
IG G FG V +K VAIK L + ++ +++E +G +HPN+
Sbjct: 15 IGAGEFGEVCSGHLKLPG----KREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L G + +++ EFM N SL D + + ++ G A G+ YL
Sbjct: 71 IHLEGVVT----KSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVSTAVVGTFG--YA 261
+ + ++R A N+L++ N K+SDFGL+R E T+ S A+ G +
Sbjct: 126 AD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS-ALGGKIPIRWT 181
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFG 320
AP+ I+ T+ SDVWS+G+V++E+++ G R T Q ++ ++Q
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD---MTNQDVINAIEQ--------- 229
Query: 321 LIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSN 372
D RL A + +L +C K RPK Q+V L ++++ N
Sbjct: 230 ---DYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 276
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGV 139
R+ +GEG FG V P GD T E VA+K L + H E++ L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPE-GDNTGEQ--VAVKSLKPESGGNHIADLKKEIEILRN 67
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G C DG GI+ L+ EF+ + SL+++L + + K +L +
Sbjct: 68 LYHENIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQIC 124
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVSTAVVGT 257
+G+ YL Q ++RD A NVL++ + K+ DFGL + E T
Sbjct: 125 KGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ + SDVWSFGV L+E+LT
Sbjct: 182 FWYA-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G FG V G VA+K + D + ++AE + L H NLV
Sbjct: 201 IGKGEFGDVML---------GDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
+L+G V+ + G+ +V E+M SL D+L +R L L L E + YL
Sbjct: 250 QLLG-VIVEEKGGL--YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAAPD 264
++RD A NVL+ E+ K+SDFGL +E ST G + AP+
Sbjct: 307 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPE 356
Query: 265 YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
+ + KSDVWSFG++L+E+ + R YP K +
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEIYSFGRV-----------------PYPRIPLK---DVV 396
Query: 325 PRLEKEYSINEAR----KIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
PR+EK Y ++ + + NC + RP Q+ E+L+ I
Sbjct: 397 PRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 39/319 (12%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVA 115
P +E+ V +++ ATN S +G G FG V +K + S VA
Sbjct: 25 PHTFEDPTQT--VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS----VA 77
Query: 116 IKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL 174
IK L + ++ ++ E +G +HPN+++L G + ++V E+M N SL
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSL 133
Query: 175 EDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLS 234
D + + ++ G A G+ YL + + ++RD A N+L++ N K+S
Sbjct: 134 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 235 DFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-G 290
DFGL+R + P +T + + +P+ I T+ SDVWS+G+VL+E+++ G
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 291 RRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKS 350
R + Q +++ V + G + P ++ ++ + L +C K
Sbjct: 248 ERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LMLDCWQKD 290
Query: 351 SKDRPKMSQVVERLKQIVQ 369
+RPK Q+V L ++++
Sbjct: 291 RNNRPKFEQIVSILDKLIR 309
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNL 145
IG G FG V +K VAIK L ++ +++E +G +HPN+
Sbjct: 22 IGVGEFGEVCSGRLKVPG----KREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L G + +++ E+M N SL D + + ++ G G+ YL
Sbjct: 78 IHLEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAA 262
+ + ++RD A N+L++ N K+SDFG++R + P +T + + A
Sbjct: 133 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 187
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ I T+ SDVWS+G+V++E+++ G R + Q +++ +++ G
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIEE--------GY 236
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSN 372
+ P ++ ++++ L +C K DRPK Q+V L ++++ N
Sbjct: 237 RLPPPMDCPIALHQ------LMLDCWQKERSDRPKFGQIVNMLDKLIRNPN 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F ++ + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
+M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 YMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGL R + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNL 145
IG G FG V +K VAIK L ++ +++E +G +HPN+
Sbjct: 16 IGVGEFGEVCSGRLKVPG----KREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ L G + +++ E+M N SL D + + ++ G G+ YL
Sbjct: 72 IHLEGVVT----KCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAA 262
+ + ++RD A N+L++ N K+SDFG++R + P +T + + A
Sbjct: 127 SD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTA 181
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ I T+ SDVWS+G+V++E+++ G R + Q +++ +++ G
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIEE--------GY 230
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSN 372
+ P ++ ++++ L +C K DRPK Q+V L ++++ N
Sbjct: 231 RLPPPMDCPIALHQ------LMLDCWQKERSDRPKFGQIVNMLDKLIRNPN 275
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 57/331 (17%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIK-PAAG 105
P+ Y E +Y E +A F+R ++ IG G G V ++ P
Sbjct: 23 PQFYAEP------HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQR 76
Query: 106 DGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLL 164
D VAIK L + ++ +++E +G +HPN+++L G RG ++
Sbjct: 77 D-----VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMI 127
Query: 165 VYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASN 222
V E+M N SL+ L + F + + ++ G G+ YL + + ++RD A N
Sbjct: 128 VTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSD---LGYVHRDLAARN 181
Query: 223 VLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWS 279
VL+D N K+SDFGL+R + P +T + + AP+ I ++ SDVWS
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWS 239
Query: 280 FGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARK 338
FGVV++E+L G R + +E + PA +
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-----------------PMGCPHA 282
Query: 339 IGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ +L +C K RP+ SQ+V L +++
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 86 KIGEGGFGSVYKS---SIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
++GEG FG V+ + ++ P T + +VA+K L L K + E + L L+H
Sbjct: 22 ELGEGAFGKVFLAECYNLSP-----TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP----------------L 186
++VK G C DG+ I +V+E+M + L F RA P L
Sbjct: 77 EHIVKFYGVCG-DGDPLI---MVFEYMKHGDLNK--FLRAHGPDAMILVDGQPRQAKGEL 130
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
LHI A G+ YL ++RD N L+ N K+ DFG++R+
Sbjct: 131 GLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ V + + P+ I T +SDVWSFGV+L+E+ T
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 146/319 (45%), Gaps = 39/319 (12%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVA 115
P YE+ V +++ ATN S +G G FG V +K + S VA
Sbjct: 25 PHTYEDPTQT--VHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS----VA 77
Query: 116 IKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL 174
IK L + ++ ++ E +G +HPN+++L G + ++V E M N SL
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSL 133
Query: 175 EDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLS 234
D + + ++ G A G+ YL + + ++RD A N+L++ N K+S
Sbjct: 134 -DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVS 189
Query: 235 DFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-G 290
DFGL+R + P +T + + +P+ I T+ SDVWS+G+VL+E+++ G
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 291 RRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKS 350
R + Q +++ V + G + P ++ ++ + L +C K
Sbjct: 248 ERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LMLDCWQKD 290
Query: 351 SKDRPKMSQVVERLKQIVQ 369
+RPK Q+V L ++++
Sbjct: 291 RNNRPKFEQIVSILDKLIR 309
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 38/290 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK-QWVAEVQFLGVLEHPNL 145
IG G FG V + +K G E + VAIK L + + ++++E +G EHPN+
Sbjct: 24 IGAGEFGEVCRGRLK---APGKKE-SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLED--HLFNRAFPPLPWKTRLHIILGAAEGLA 203
++L G + +++ EFM N +L+ L + F + + ++ G A G+
Sbjct: 80 IRLEGVVT----NSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMR 132
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG---TFGY 260
YL E + ++RD A N+L++ N K+SDFGL+R T+ +G +
Sbjct: 133 YLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
AP+ I T+ SD WS+G+V++E+++ G R + Q ++ ++Q
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD---MSNQDVINAIEQ-------- 238
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
D RL + + +L +C K RP+ QVV L ++++
Sbjct: 239 ----DYRLPPPPDCPTS--LHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 15 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 61
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 62 RHVNILLFMGYSTAP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 113
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 226
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 227 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G FG V G VA+K + D + ++AE + L H NLV
Sbjct: 20 IGKGEFGDVML---------GDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 68
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
+L+G V+ + G+ +V E+M SL D+L +R L L L E + YL
Sbjct: 69 QLLG-VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAAPD 264
++RD A NVL+ E+ K+SDFGL +E ST G + AP+
Sbjct: 126 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPE 175
Query: 265 YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
+ + KSDVWSFG++L+E+ + R YP K +
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEIYSFGRV-----------------PYPRIPLK---DVV 215
Query: 325 PRLEKEYSINEAR----KIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
PR+EK Y ++ + + NC + RP Q+ E+L+ I
Sbjct: 216 PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G FG V G VA+K + D + ++AE + L H NLV
Sbjct: 29 IGKGEFGDVML---------GDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
+L+G V+ + G+ +V E+M SL D+L +R L L L E + YL
Sbjct: 78 QLLG-VIVEEKGGL--YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAAPD 264
++RD A NVL+ E+ K+SDFGL +E ST G + AP+
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPE 184
Query: 265 YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
+ + KSDVWSFG++L+E+ + R YP K +
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRV-----------------PYPRIPLK---DVV 224
Query: 325 PRLEKEYSINEAR----KIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
PR+EK Y ++ + + NC + RP Q+ E+L+ I
Sbjct: 225 PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QWV 131
AT+ + + +IG G +G+VYK+ P +G VA+K + +G +G + V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH------FVALKSVRVPNGEEGLPISTVREV 54
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPP-LPWK 189
A ++ L EHPN+V+L+ CA +R I+ LV+E +++ L +L ++A PP LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYL-DKAPPPGLPAE 112
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +++RD K N+L+ KL+DFGLAR + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
VV T Y AP+ + D+WS G + EM
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 29/225 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 52
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 107
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHV 250
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 108 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH- 163
Query: 251 STAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 ---EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 4 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 54
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 55 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 162
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 53
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 54 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 161
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 36/288 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNL 145
+G G FG V +K + S VAIK L + ++ ++ E +G +HPN+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEIS----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
++L G + ++V E+M N SL D + + ++ G A G+ YL
Sbjct: 80 IRLEGVVT----KSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAA 262
+ + ++RD A N+L++ N K+SDFGL+R + P +T + + +
Sbjct: 135 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTS 189
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ I T+ SDVWS+G+VL+E+++ G R + Q +++ V + G
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE---MSNQDVIKAVDE--------GY 238
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ P ++ ++ + L +C K +RPK Q+V L ++++
Sbjct: 239 RLPPPMDCPAALYQ------LMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK+ K VVA+KK+ D G+ + E+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IREIS 58
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 59 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 166
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 53
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 54 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 161
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 65 NLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL 124
NL S + D + K+G G +G VY G + VA+K L D +
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVY-------VGVWKKYSLTVAVKTLKEDTM 70
Query: 125 QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP 184
+ ++++ E + ++HPNLV+L+G C ++ I V E+M +L D+L
Sbjct: 71 EV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYI----VTEYMPYGNLLDYLRECNRE 125
Query: 185 PLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+ L++ + + YL + I+RD A N L+ EN K++DFGL+R M
Sbjct: 126 EVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL--M 180
Query: 245 VGHTHVSTAVVG-TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ 303
G T+ + A + AP+ + + KSDVW+FGV+L+E+ T S
Sbjct: 181 TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS---------- 230
Query: 304 RLLEWVQQYPADSKKFGLIMDPRLEKEYSINEAR----KIGRLADNCLSKSSKDRPKMSQ 359
P + D LEK Y + + K+ L C S DRP ++
Sbjct: 231 ---------PYPGIDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
Query: 360 V 360
Sbjct: 281 T 281
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 46/323 (14%)
Query: 52 PRGIPELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEA 111
PRG + E A L ATN S +G G FG V +K + S
Sbjct: 16 PRGSTQTVHEFAKEL---------DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS-- 63
Query: 112 TVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFML 170
VAIK L + ++ ++ E +G +HPN+++L G + ++V E+M
Sbjct: 64 --VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTEYME 117
Query: 171 NRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR 230
N SL D + + ++ G A G+ YL + + ++RD A N+L++ N
Sbjct: 118 NGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 173
Query: 231 PKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEM 287
K+SDFGL+R + P +T + + +P+ I T+ SDVWS+G+VL+E+
Sbjct: 174 CKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 288 LT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNC 346
++ G R + Q +++ V + G + P ++ ++ + L +C
Sbjct: 232 MSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LMLDC 274
Query: 347 LSKSSKDRPKMSQVVERLKQIVQ 369
K +RPK Q+V L ++++
Sbjct: 275 WQKDRNNRPKFEQIVSILDKLIR 297
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 81 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 250
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 251 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 296
Query: 370 VSN 372
+++
Sbjct: 297 LTS 299
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 50/287 (17%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G FG V G VA+K + D + ++AE + L H NLV
Sbjct: 14 IGKGEFGDVML---------GDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 62
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
+L+G V+ + G+ +V E+M SL D+L +R L L L E + YL
Sbjct: 63 QLLG-VIVEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAAPD 264
++RD A NVL+ E+ K+SDFGL +E ST G + AP+
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPE 169
Query: 265 YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
+ + KSDVWSFG++L+E+ + R YP K +
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEIYSFGRV-----------------PYPRIPLK---DVV 209
Query: 325 PRLEKEYSINEAR----KIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
PR+EK Y ++ + + NC + RP Q+ E+L+ I
Sbjct: 210 PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 38/290 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK-QWVAEVQFLGVLEHPNL 145
IG G FG V + +K G E + VAIK L + + ++++E +G EHPN+
Sbjct: 22 IGAGEFGEVCRGRLK---APGKKE-SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLED--HLFNRAFPPLPWKTRLHIILGAAEGLA 203
++L G + +++ EFM N +L+ L + F + + ++ G A G+
Sbjct: 78 IRLEGVVT----NSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMR 130
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG---TFGY 260
YL E + ++RD A N+L++ N K+SDFGL+R T+ +G +
Sbjct: 131 YLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
AP+ I T+ SD WS+G+V++E+++ G R + Q ++ ++Q
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD---MSNQDVINAIEQ-------- 236
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
D RL + + +L +C K RP+ QVV L ++++
Sbjct: 237 ----DYRLPPPPDCPTS--LHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 49/307 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDG---------ERGIQRLLV---------YEFMLNRSLEDHLFNRAFPPL 186
++ L+G C DG +G R + Y + +NR E+ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM-------- 154
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+K + A G+ YL + I+RD A NVL+ EN K++DFGLAR+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
+ +T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--- 268
Query: 307 EWVQQYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
F L+ + R++K N ++ + +C RP Q+VE L
Sbjct: 269 ------------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 366 QIVQVSN 372
+I+ ++
Sbjct: 315 RILTLTT 321
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+G G FG V+ ++ ++ T VA+K + + G + ++AE + L+H L
Sbjct: 22 KLGAGQFGEVWMATY--------NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 72
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL AV + I ++ EFM SL D L + P + AEG+A++
Sbjct: 73 VKL---HAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
+ I+RD +A+N+L+ + K++DFGLAR V + TA G + A
Sbjct: 128 EQR---NYIHRDLRAANILVSASLVCKIADFGLAR----VIEDNEYTAREGAKFPIKWTA 180
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 4 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 54
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 55 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 162
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 37/297 (12%)
Query: 82 SRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK-QWVAEVQFLGVL 140
+R IG G FG VYK +K ++G + VAIK L + + ++ E +G
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSG---KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR--AFPPLPWKTRLHIILGA 198
H N+++L G + + +++ E+M N +L+ L + F L + ++ G
Sbjct: 104 SHHNIIRLEGVIS----KYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGI 156
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVV 255
A G+ YL + ++RD A N+L++ N K+SDFGL+R + P +T +
Sbjct: 157 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI- 212
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I T+ SDVWSFG+V++E++T RP E E V + D
Sbjct: 213 -PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWELSNHE-VMKAIND 265
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSN 372
+ MD I +L C + RPK + +V L ++++ +
Sbjct: 266 GFRLPTPMDC----------PSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 85 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 254
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 255 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 300
Query: 370 VSN 372
+++
Sbjct: 301 LTS 303
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 266 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 370 VSN 372
+++
Sbjct: 312 LTS 314
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 4 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 54
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 55 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 162
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 49/326 (15%)
Query: 62 KAHNLRVF----SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGT 108
K LR F ++ + Q ++F++ L +G G FG V +K +
Sbjct: 15 KLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEI 74
Query: 109 SEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYE 167
S VAIK L + ++ ++ E +G +HPN+++L G + ++V E
Sbjct: 75 S----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT----KSKPVMIVTE 126
Query: 168 FMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE 227
M N SL D + + ++ G A G+ YL + + ++RD A N+L++
Sbjct: 127 XMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINS 182
Query: 228 NFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVL 284
N K+SDFGL+R + P +T + + +P+ I T+ SDVWS+G+VL
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVL 240
Query: 285 YEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLA 343
+E+++ G R + Q +++ V + G + P ++ ++ + L
Sbjct: 241 WEVMSYGERPYWE---MSNQDVIKAVDE--------GYRLPPPMDCPAALYQ------LM 283
Query: 344 DNCLSKSSKDRPKMSQVVERLKQIVQ 369
+C K +RPK Q+V L ++++
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 49/307 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D EA VA+K L D + V+E++ + ++ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 145 LVKLIGYCAVDG---------ERGIQRLLV---------YEFMLNRSLEDHLFNRAFPPL 186
++ L+G C DG +G R + Y + +NR E+ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM-------- 154
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+K + A G+ YL + I+RD A NVL+ EN K++DFGLAR+ +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
+ +T + AP+ + T +SDVWSFGV+++E+ T S P E
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--- 268
Query: 307 EWVQQYPADSKKFGLIMDP-RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
F L+ + R++K N ++ + +C RP Q+VE L
Sbjct: 269 ------------FKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 366 QIVQVSN 372
+I+ ++
Sbjct: 315 RILTLTT 321
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QWV 131
AT+ + + +IG G +G+VYK+ P +G VA+K + +G +G + V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH------FVALKSVRVPNGEEGLPISTVREV 54
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPP-LPWK 189
A ++ L EHPN+V+L+ CA +R I+ LV+E +++ L +L ++A PP LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYL-DKAPPPGLPAE 112
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +++RD K N+L+ KL+DFGLAR + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
VV T Y AP+ + D+WS G + EM
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 28/207 (13%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+G G FG V+ ++ ++ T VA+K + + G + ++AE + L+H L
Sbjct: 189 KLGAGQFGEVWMATY--------NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 239
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL AV + I ++ EFM SL D L + P + AEG+A++
Sbjct: 240 VKL---HAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
+ I+RD +A+N+L+ + K++DFGLAR G + AP+
Sbjct: 295 EQR---NYIHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEA 340
Query: 266 IETGHLTAKSDVWSFGVVLYEMLTGRR 292
I G T KSDVWSFG++L E++T R
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 28 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 78
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 79 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 134 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 186
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 89 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 258
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 259 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 304
Query: 370 VSN 372
+++
Sbjct: 305 LTS 307
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 21/238 (8%)
Query: 57 ELYEEKAHNLRVFSYSEMRQA---TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATV 113
EL E++ L F + + +DF ++ ++G G G V+K S KP+ +
Sbjct: 8 ELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 67
Query: 114 VAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRS 173
+ IK R+ Q + E+Q L P +V G DGE I E M S
Sbjct: 68 LEIKPAIRN------QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGS 117
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
L D + +A +P + + + +GL YL E + ++++RD K SN+L++ KL
Sbjct: 118 L-DQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 173
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
DFG++ G ++ ++ + VGT Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 174 CDFGVS--GQLI--DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 26 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 77 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 132 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 184
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK+ K VVA+KK+ D G+ + E+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IREIS 61
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 62 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 169
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+G G FG V+ ++ ++ T VA+K + + G + ++AE + L+H L
Sbjct: 195 KLGAGQFGEVWMATY--------NKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 245
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL AV + I ++ EFM SL D L + P + AEG+A++
Sbjct: 246 VKL---HAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
+ I+RD +A+N+L+ + K++DFGLAR V + TA G + A
Sbjct: 301 EQR---NYIHRDLRAANILVSASLVCKIADFGLAR----VIEDNEYTAREGAKFPIKWTA 353
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 265
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 266 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 370 VSN 372
+++
Sbjct: 312 LTS 314
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 20 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 66
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 67 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 118
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 119 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 231
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 232 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 88 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 257
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 258 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 303
Query: 370 VSN 372
+++
Sbjct: 304 LTS 306
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 57/331 (17%)
Query: 56 PELYEEKAHNLRVFSYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIK-PAAG 105
P+ Y E +Y E +A F+R ++ IG G G V ++ P
Sbjct: 23 PQFYAEP------HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQR 76
Query: 106 DGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLL 164
D VAIK L + ++ +++E +G +HPN+++L G RG ++
Sbjct: 77 D-----VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMI 127
Query: 165 VYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASN 222
V E+M N SL+ L + F + + ++ G G+ YL + + ++RD A N
Sbjct: 128 VTEYMENGSLDTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSD---LGYVHRDLAARN 181
Query: 223 VLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWS 279
VL+D N K+SDFGL+R + P T + + AP+ I ++ SDVWS
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWS 239
Query: 280 FGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARK 338
FGVV++E+L G R + +E + PA +
Sbjct: 240 FGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-----------------PMGCPHA 282
Query: 339 IGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ +L +C K RP+ SQ+V L +++
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 17 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 63
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 64 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 115
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 116 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 228
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 229 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK+ K VVA+KK+ D G+ + E+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IREIS 61
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 62 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 117 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 169
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 21 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 71
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 72 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 127 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 179
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 51
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 106
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 29 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 79
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 80 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 135 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 187
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 20 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 71 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 178
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 22 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 72
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 73 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 128 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 180
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 51
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 106
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 51
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 106
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 20 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 66
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 67 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 118
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 119 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 231
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 232 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 14 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 64
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 65 LVQLY---AVVSEEPIX--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 120 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEXTARQGAKFPIKWT 172
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 51
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 106
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 107 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHK----QWV 131
AT+ + + +IG G +G+VYK+ P +G VA+K + +G +G + V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH------FVALKSVRVPNGEEGLPISTVREV 54
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPP-LPWK 189
A ++ L EHPN+V+L+ CA +R I+ LV+E +++ L +L ++A PP LP +
Sbjct: 55 ALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYL-DKAPPPGLPAE 112
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
T ++ GL +LH +++RD K N+L+ KL+DFGLAR + +
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQM 166
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
VV T Y AP+ + D+WS G + EM
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 53
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 108
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 166 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 53
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 54 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+GLA+ H +V++RD K N+L++ KL+DFGLAR + T+ V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 256 GTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 43 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 89
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 90 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 141
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 142 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 254
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 255 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 53
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 54 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+GLA+ H +V++RD K N+L++ KL+DFGLAR + T+ V
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 164
Query: 256 GTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 165 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 42 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 88
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 89 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 140
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 141 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 253
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 254 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 46/290 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-----LQGHKQWVAEVQFLGVL 140
+IG G FG+VYK GD VA+K LN LQ K EV L
Sbjct: 15 RIGSGSFGTVYKGKWH---GD-------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKT 61
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
H N++ +GY Q +V ++ SL HL F + + I
Sbjct: 62 RHVNILLFMGYSTKP-----QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQT 113
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
A+G+ YLH +I+RD K++N+ L E+ K+ DFGLA +H + G+
Sbjct: 114 AQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 259 GYAAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPAD 315
+ AP+ I + + +SDV++FG+VLYE++TG+ N +Q + + Y
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGY--- 226
Query: 316 SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
+ P L K S N + + RL CL K +RP Q++ ++
Sbjct: 227 -------LSPDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF ++ ++G G G V+K S KP+ + + IK R+ Q + E+Q L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRELQVLH 121
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
P +V G DGE I E M SL D + +A +P + + +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKAGR-IPEQILGKVSIAV 175
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
+GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ + VGT
Sbjct: 176 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANSFVGTR 229
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 52
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 107
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 108 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 165 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 273 VKLGQGCFGEVWMGTW-----NGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 323
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 324 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAA 262
+ + ++RD +A+N+L+ EN K++DFGLAR ++ + F + A
Sbjct: 379 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPIKWTA 432
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ G T KSDVWSFG++L E+ T R
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 26 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 77 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 132 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 184
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 25 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 75
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 76 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 131 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 183
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 52
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 107
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 108 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 165 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 20 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 71 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEXTAREGAKFPIKWTA 178
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK-------- 128
AT+ + + +IG G +G+VYK+ P +G VA+K + G
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKAR-DPHSGH------FVALKSVRVPNGGGGGGGLPISTV 59
Query: 129 QWVAEVQFLGVLEHPNLVKLIGYCAVD-GERGIQRLLVYEFMLNRSLEDHLFNRAFPP-L 186
+ VA ++ L EHPN+V+L+ CA +R I+ LV+E +++ L +L ++A PP L
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYL-DKAPPPGL 117
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
P +T ++ GL +LH +++RD K N+L+ KL+DFGLAR +
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYS 171
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
+ T VV T Y AP+ + D+WS G + EM
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 53
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 108
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 166 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK+ K VVA+KK+ D G+ + E+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 56 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+GLA+ H +V++RD K N+L++ KL+DFGLAR + T+ V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 256 GTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 30 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 80
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 81 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 136 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 188
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 15 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 65
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 66 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 121 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 173
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 36/221 (16%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQF 136
+ ++ K+GEG +G VYK+ S+ +VA+K++ D G+ + E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAK--------DSQGRIVALKRIRLDAEDEGIPSTA--IREISL 72
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKTRLH 193
L L HPN+V LI + ER + LV+EFM L + L+++ K L+
Sbjct: 73 LKELHHPNIVSLID--VIHSERCLT--LVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLY 126
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVS 251
+L G+A+ H+ ++++RD K N+L++ + KL+DFGLAR P+ +TH
Sbjct: 127 QLL---RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-- 178
Query: 252 TAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYEMLTGR 291
V T Y APD + + + D+WS G + EM+TG+
Sbjct: 179 --EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 36/221 (16%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQF 136
+ ++ K+GEG +G VYK+ S+ +VA+K++ D G+ + E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAK--------DSQGRIVALKRIRLDAEDEGIPSTA--IREISL 72
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKTRLH 193
L L HPN+V LI + ER + LV+EFM L + L+++ K L+
Sbjct: 73 LKELHHPNIVSLID--VIHSERCLT--LVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLY 126
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVS 251
+L G+A+ H+ ++++RD K N+L++ + KL+DFGLAR P+ +TH
Sbjct: 127 QLL---RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-- 178
Query: 252 TAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYEMLTGR 291
V T Y APD + + + D+WS G + EM+TG+
Sbjct: 179 --EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 53
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 108
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 109 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 166 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKTFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 55
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L++ L+ + A +P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIK 110
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 111 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 167
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 168 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 4 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 54
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 55 LLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GL++ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 110 FQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 162
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 17 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 67
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 68 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 123 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 175
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 190 VKLGQGCFGEVWMGTW-----NGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 241 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAA 262
+ + ++RD +A+N+L+ EN K++DFGLAR ++ + F + A
Sbjct: 296 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR---LIEDNEYTARQGAKFPIKWTA 349
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ G T KSDVWSFG++L E+ T R
Sbjct: 350 PEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEXTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 20 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 71 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+RD +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 178
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF ++ ++G G G V+K S KP+ + + IK R+ Q + E+Q L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRELQVLH 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
P +V G DGE I E M SL D + +A +P + + +
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGKVSIAV 132
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
+GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ + VGT
Sbjct: 133 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANSFVGTR 186
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M +DF ++ ++G G G V+K S KP+ + + IK R+ Q + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRE 54
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+Q L P +V G DGE I E M SL D + +A +P +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGK 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ + +GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANS 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
VGT Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M +DF ++ ++G G G V+K S KP+ + + IK R+ Q + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRE 54
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+Q L P +V G DGE I E M SL D + +A +P +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGK 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ + +GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANS 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
VGT Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 190 VKLGQGCFGEVWMGTW-----NGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 241 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 296 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 348
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M +DF ++ ++G G G V+K S KP+ + + IK R+ Q + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRE 54
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+Q L P +V G DGE I E M SL D + +A +P +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGK 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ + +GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANS 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
VGT Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M +DF ++ ++G G G V+K S KP+ + + IK R+ Q + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRE 54
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+Q L P +V G DGE I E M SL D + +A +P +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGK 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ + +GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ +
Sbjct: 109 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANS 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
VGT Y +P+ ++ H + +SD+WS G+ L EM GR
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 52
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L+ L+ + A +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LSMDLKKFMDASALTGIPLPLIK 107
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 108 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 165 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 117/230 (50%), Gaps = 28/230 (12%)
Query: 65 NLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-G 123
LR+ +E++ R+ +G G FG+VYK P +G + VAIK LN G
Sbjct: 31 QLRILKETELK-------RVKVLGSGAFGTVYKGIWVP---EGETVKIPVAIKILNETTG 80
Query: 124 LQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE--DHLFNR 181
+ + +++ E + ++HP+LV+L+G C + + +L+ + +L E D++ ++
Sbjct: 81 PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 182 AFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE 241
L W ++ A+G+ YL E ++++RD A NVL+ K++DFGLAR
Sbjct: 141 LL--LNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 242 GPMVGHTHVSTAVVG--TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ G A G + A + I T +SDVWS+GV ++E++T
Sbjct: 190 --LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 15 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 65
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 66 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 121 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 173
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 41/303 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVL-EHPN 144
+GEG FG V + D + T VA+K L D + ++E++ + ++ +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW--------------KT 190
++ L+G C DG + + E+ +L ++L R P L + K
Sbjct: 137 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ A G+ YL + I+RD A NVL+ E+ K++DFGLAR+ + +
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-RLLEWV 309
+T + AP+ + T +SDVWSFGV+L+E+ T S P E +LL
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL--- 306
Query: 310 QQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K G MD + NE + R +C RP Q+VE L +IV
Sbjct: 307 --------KEGHRMD---KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 352
Query: 370 VSN 372
+++
Sbjct: 353 LTS 355
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
+F ++ KIGEG +G VYK A T E + +L+ + + E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYK-----ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE 58
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 59 LNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTAVVGT 257
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH V T
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVT 166
Query: 258 FGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
+F ++ KIGEG +G VYK A T E + +L+ + + E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE 57
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L HPN+VKL+ + + LV+EF L++ L+ + A +P +
Sbjct: 58 LNHPNIVKLLDVIHTEN----KLYLVFEF-LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTAVVGT 257
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH V T
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVT 165
Query: 258 FGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK A T E VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+EF L+ L+ + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEF-LSMDLKKFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 36/288 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGVLEHPNL 145
+G G FG V +K + S VAIK L + ++ ++ E +G +HPN+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEIS----VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
++L G + ++V E M N SL D + + ++ G A G+ YL
Sbjct: 80 IRLEGVVT----KSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---EGPMVGHTHVSTAVVGTFGYAA 262
+ + ++RD A N+L++ N K+SDFGL+R + P +T + + +
Sbjct: 135 SD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTS 189
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
P+ I T+ SDVWS+G+VL+E+++ G R + Q +++ V + G
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE---MSNQDVIKAVDE--------GY 238
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+ P ++ ++ + L +C K +RPK Q+V L ++++
Sbjct: 239 RLPPPMDCPAALYQ------LMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 13 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 63
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 64 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 119 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 171
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 28/229 (12%)
Query: 66 LRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GL 124
LR+ +E++ R+ +G G FG+VYK P +G + VAIK LN G
Sbjct: 9 LRILKETELK-------RVKVLGSGAFGTVYKGIWVP---EGETVKIPVAIKILNETTGP 58
Query: 125 QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE--DHLFNRA 182
+ + +++ E + ++HP+LV+L+G C + + +L+ + +L E D++ ++
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG 242
L W ++ A+G+ YL E ++++RD A NVL+ K++DFGLAR
Sbjct: 119 L--LNWCVQI------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL- 166
Query: 243 PMVGHTHVSTAVVG--TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ G A G + A + I T +SDVWS+GV ++E++T
Sbjct: 167 -LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 21 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 72 LVQLY---AVVSEEPI--YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 127 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 179
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 57/312 (18%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL 137
ND IGEG FG V K+ IK DG AIK++ + H+ + E++ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKK---DGLR--MDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 138 GVL-EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------------FNRA 182
L HPN++ L+G C RG L + E+ + +L D L N
Sbjct: 80 CKLGHHPNIINLLGACE---HRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANST 135
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG 242
L + LH A G+ YL + Q I+RD A N+L+ EN+ K++DFGL+R
Sbjct: 136 ASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ 192
Query: 243 PM-----VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ +G V + + Y+ T SDVWS+GV+L+E+++ +
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSV--------YTTNSDVWSYGVLLWEIVSLGGT---- 240
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
P E ++ P RLEK +N ++ L C + +RP
Sbjct: 241 -PYCGMTCAELYEKLPQGY---------RLEK--PLNCDDEVYDLMRQCWREKPYERPSF 288
Query: 358 SQVVERLKQIVQ 369
+Q++ L ++++
Sbjct: 289 AQILVSLNRMLE 300
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 34/283 (12%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF ++ ++G G G V+K S KP+ + + IK R+ Q + E+Q L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------QIIRELQVLH 62
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
P +V G DGE I E M SL D + +A +P + + +
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKKA-GRIPEQILGKVSIAV 116
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
+GL YL E + ++++RD K SN+L++ KL DFG++ G ++ ++ VGT
Sbjct: 117 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DEMANEFVGTR 170
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKK 318
Y +P+ ++ H + +SD+WS G+ L EM GR P LL+++ P
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP---- 223
Query: 319 FGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
P+L E + + CL K+ +R + Q++
Sbjct: 224 ------PKLPSAVFSLEFQD---FVNKCLIKNPAERADLKQLM 257
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 190 VKLGQGCFGEVWMGTW-----NGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 240
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 241 LVQLY---AVVSEEPI--YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 296 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 348
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 135/312 (43%), Gaps = 57/312 (18%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL 137
ND IGEG FG V K+ IK DG AIK++ + H+ + E++ L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKK---DGLRMDA--AIKRMKEYASKDDHRDFAGELEVL 69
Query: 138 GVL-EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------------FNRA 182
L HPN++ L+G C RG L + E+ + +L D L N
Sbjct: 70 CKLGHHPNIINLLGACE---HRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANST 125
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG 242
L + LH A G+ YL + Q I+RD A N+L+ EN+ K++DFGL+R
Sbjct: 126 ASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQ 182
Query: 243 PM-----VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ +G V + + Y+ T SDVWS+GV+L+E+++ +
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSV--------YTTNSDVWSYGVLLWEIVSLGGT---- 230
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
P E ++ P RLEK +N ++ L C + +RP
Sbjct: 231 -PYCGMTCAELYEKLPQGY---------RLEK--PLNCDDEVYDLMRQCWREKPYERPSF 278
Query: 358 SQVVERLKQIVQ 369
+Q++ L ++++
Sbjct: 279 AQILVSLNRMLE 290
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 21 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 71
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 72 LVQLY---AVVSEEPI--YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 127 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEWTARQGAKFPIKWT 179
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG--HKQWVAEVQFLGVLEHP 143
+IG G FG V+ ++ ++ T+VA+K R+ L +++ E + L HP
Sbjct: 121 QIGRGNFGEVFSGRLR-------ADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHP 172
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-FNRA-FPPLPWKTRLHIILGAAEG 201
N+V+LIG C Q+ +Y M D L F R L KT L ++ AA G
Sbjct: 173 NIVRLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+ YL I+RD A N L+ E K+SDFG++RE + +
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
AP+ + G +++SDVWSFG++L+E + S N + R E+V+ K G
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR--EFVE-------KGGR 333
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+ P L + + RL + C + RP S + + L+ I
Sbjct: 334 LPCPELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 45/314 (14%)
Query: 70 SYSEMRQATNDFSRMLK---------IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN 120
+Y + QA ++F++ ++ IG G FG V +K G E V AIK L
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLP---GKRELPV-AIKTLK 59
Query: 121 RDGLQGHKQ-WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF 179
+ ++ ++ E +G +HPN++ L G + ++V E+M N SL D
Sbjct: 60 VGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVT----KSKPVMIVTEYMENGSL-DTFL 114
Query: 180 NRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA 239
+ + ++ G + G+ YL + + ++RD A N+L++ N K+SDFGL+
Sbjct: 115 KKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLS 171
Query: 240 R---EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLE 295
R + P +T + + AP+ I T+ SDVWS+G+V++E+++ G R
Sbjct: 172 RVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYW 229
Query: 296 RNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRP 355
T Q +++ V++ RL A + +L +C K RP
Sbjct: 230 E---MTNQDVIKAVEE------------GYRLPSPMDCPAA--LYQLMLDCWQKERNSRP 272
Query: 356 KMSQVVERLKQIVQ 369
K ++V L ++++
Sbjct: 273 KFDEIVNMLDKLIR 286
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 37/288 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK--QWVAEVQFLGVLEHP 143
KIG G FG+V+++ + VA+K L + +++ EV + L HP
Sbjct: 44 KIGAGSFGTVHRAEW---------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGL 202
N+V +G AV + +V E++ SL L A L + RL + A+G+
Sbjct: 95 NIVLFMG--AVTQPPNLS--IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST-AVVGTFGYA 261
YLH +++R+ K+ N+L+D+ + K+ DFGL+R + T +S+ + GT +
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWM 206
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
AP+ + KSDV+SFGV+L+E+ T ++ W PA
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQP--------------WGNLNPAQVVAAVG 252
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
RLE ++N ++ + + C + RP + +++ L+ +++
Sbjct: 253 FKCKRLEIPRNLNP--QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 44/289 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG--HKQWVAEVQFLGVLEHP 143
+IG G FG V+ ++ ++ T+VA+K R+ L +++ E + L HP
Sbjct: 121 QIGRGNFGEVFSGRLR-------ADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHP 172
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-FNRA-FPPLPWKTRLHIILGAAEG 201
N+V+LIG C Q+ +Y M D L F R L KT L ++ AA G
Sbjct: 173 NIVRLIGVCT-------QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE---GPMVGHTHVSTAVVGTF 258
+ YL I+RD A N L+ E K+SDFG++RE G + V
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK-- 280
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKK 318
+ AP+ + G +++SDVWSFG++L+E + S N + R E+V+ K
Sbjct: 281 -WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR--EFVE-------K 330
Query: 319 FGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
G + P L + + RL + C + RP S + + L+ I
Sbjct: 331 GGRLPCPELCPD-------AVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + + H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 22/236 (9%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF R+ ++G G G V K +P+ + + IK R+ Q + E+Q L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN------QIIRELQVLH 69
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
P +V G DGE I E M SL D + A +P + + +
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSL-DQVLKEA-KRIPEEILGKVSIAV 123
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
GLAYL E + Q+++RD K SN+L++ KL DFG++ G ++ ++ + VGT
Sbjct: 124 LRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLI--DSMANSFVGTR 177
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPA 314
Y AP+ ++ H + +SD+WS G+ L E+ GR + P + + LE + P
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI----PPPDAKELEAIFGRPV 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + T VA+K L + G ++AE + L+H L
Sbjct: 16 RLGAGQFGEVWMGYY--------NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRL 66
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L Y V E ++ E+M N SL D L + L L + AEG+A++
Sbjct: 67 VRL--YAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
E I+R+ +A+N+L+ + K++DFGLAR + + TA G + A
Sbjct: 122 EER---NYIHRNLRAANILVSDTLSCKIADFGLAR----LIEDNEYTAREGAKFPIKWTA 174
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ I G T KSDVWSFG++L E++T R
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLAAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M L D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 24/211 (11%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 24 VKLGQGCFGEVWMGT-----WNGT---TRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEK 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M L D L L + + A G+AY
Sbjct: 75 LVQLY---AVVSEEPI--YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYA 261
+ + ++RD +A+N+L+ EN K++DFGLAR + + TA G +
Sbjct: 130 VER---MNYVHRDLRAANILVGENLVCKVADFGLAR----LIEDNEYTARQGAKFPIKWT 182
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
AP+ G T KSDVWSFG++L E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 112 TVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN 171
T VA+K L + G ++AE + L+H LV+L Y V E ++ E+M N
Sbjct: 38 TKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQE---PIYIITEYMEN 91
Query: 172 RSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP 231
SL D L + L L + AEG+A++ E I+RD +A+N+L+ +
Sbjct: 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC 148
Query: 232 KLSDFGLAREGPMVGHTHVSTAVVGTF--GYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
K++DFGLAR ++ + F + AP+ I G T KSDVWSFG++L E++T
Sbjct: 149 KIADFGLAR---LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
Query: 290 GRR 292
R
Sbjct: 206 HGR 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+GEG FGSV + ++K DGTS V KL+ + +++++E + HPN++
Sbjct: 42 LGEGEFGSVMEGNLKQE--DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 147 KLIGYCAVDGERGIQR-LLVYEFMLNRSLEDHLFNRAFPP----LPWKTRLHIILGAAEG 201
+L+G C +GI + +++ FM L +L +P +T L ++ A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+ YL ++RD A N +L ++ ++DFGL+++ + +
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLT 289
A + + T+KSDVW+FGV ++E+ T
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK--QWVAEVQFLGVLEHP 143
KIG G FG+V+++ + VA+K L + +++ EV + L HP
Sbjct: 44 KIGAGSFGTVHRAEW---------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGL 202
N+V +G AV + +V E++ SL L A L + RL + A+G+
Sbjct: 95 NIVLFMG--AVTQPPNLS--IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
YLH +++RD K+ N+L+D+ + K+ DFGL+R S GT + A
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMA 207
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
P+ + KSDV+SFGV+L+E+ T ++ W PA
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP--------------WGNLNPAQVVAAVGF 253
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
RLE ++N ++ + + C + RP + +++ L+ +++
Sbjct: 254 KCKRLEIPRNLNP--QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 35/310 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 95
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 96 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
R+ G+ + + P+ G T+K+D WSFGV+L+E+ +
Sbjct: 209 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPS 266
Query: 300 KTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQ 359
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 267 KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAI 312
Query: 360 VVERLKQIVQ 369
++ER++ Q
Sbjct: 313 ILERIEYCTQ 322
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 57/312 (18%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL 137
ND IGEG FG V K+ IK DG AIK++ + H+ + E++ L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKK---DGLRMDA--AIKRMKEYASKDDHRDFAGELEVL 76
Query: 138 GVL-EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------------FNRA 182
L HPN++ L+G C RG L + E+ + +L D L N
Sbjct: 77 CKLGHHPNIINLLGACE---HRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANST 132
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG 242
L + LH A G+ YL + Q I+R+ A N+L+ EN+ K++DFGL+R
Sbjct: 133 ASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQ 189
Query: 243 PM-----VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ +G V + + Y+ T SDVWS+GV+L+E+++ +
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSV--------YTTNSDVWSYGVLLWEIVSLGGT---- 237
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
P E ++ P RLEK +N ++ L C + +RP
Sbjct: 238 -PYCGMTCAELYEKLPQGY---------RLEK--PLNCDDEVYDLMRQCWREKPYERPSF 285
Query: 358 SQVVERLKQIVQ 369
+Q++ L ++++
Sbjct: 286 AQILVSLNRMLE 297
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D ++GEG FG V+ + + + +VA+K L + + E + L +
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASESARQDFQREAELLTM 76
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-----LF----NRAFPPL 186
L+H ++V+ G C G L+V+E+M LNR L H L + A PL
Sbjct: 77 LQHQHIVRFFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
L + A G+ YL GL ++RD N L+ + K+ DFG++R+
Sbjct: 133 GLGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ V + + P+ I T +SDVWSFGVVL+E+ T
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 35/310 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 118
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 119 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
R+ G+ + + P+ G T+K+D WSFGV+L+E+ +
Sbjct: 232 RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPS 289
Query: 300 KTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQ 359
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 290 KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAI 335
Query: 360 VVERLKQIVQ 369
++ER++ Q
Sbjct: 336 ILERIEYCTQ 345
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 29/222 (13%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVAEVQ 135
+F ++ KIGEG +G VYK A T E VVA+KK+ D G+ + E+
Sbjct: 3 NFQKVEKIGEGTYGVVYK-----ARNKLTGE--VVALKKIRLDTETEGVPSTA--IREIS 53
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHII 195
L L HPN+VKL+ + + LV+E + ++ L+ + A +P +
Sbjct: 54 LLKELNHPNIVKLLDVIHTEN----KLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYL 108
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTA 253
+GLA+ H +V++RD K N+L++ KL+DFGLAR P+ +TH
Sbjct: 109 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH---- 161
Query: 254 VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D ++GEG FG V+ + + + +VA+K L + + E + L +
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASESARQDFQREAELLTM 70
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-----LF----NRAFPPL 186
L+H ++V+ G C G L+V+E+M LNR L H L + A PL
Sbjct: 71 LQHQHIVRFFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
L + A G+ YL GL ++RD N L+ + K+ DFG++R+
Sbjct: 127 GLGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ V + + P+ I T +SDVWSFGVVL+E+ T
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 22/210 (10%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+K+G+G FG V+ + +GT T VAIK L + G + ++ E Q + L H
Sbjct: 191 VKLGQGCFGEVWMGTW-----NGT---TRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEK 241
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
LV+L AV E I +V E+M SL D L L + + A G+AY
Sbjct: 242 LVQLY---AVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 296
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF--GYAA 262
+ + ++RD +A+N+L+ EN K++DFGL R ++ + F + A
Sbjct: 297 VER---MNYVHRDLRAANILVGENLVCKVADFGLGR---LIEDNEYTARQGAKFPIKWTA 350
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ G T KSDVWSFG++L E+ T R
Sbjct: 351 PEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D ++GEG FG V+ + + + +VA+K L + + E + L +
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPE--QDKMLVAVKALKEASESARQDFQREAELLTM 99
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-----LF----NRAFPPL 186
L+H ++V+ G C G L+V+E+M LNR L H L + A PL
Sbjct: 100 LQHQHIVRFFGVCT----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
L + A G+ YL GL ++RD N L+ + K+ DFG++R+
Sbjct: 156 GLGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ V + + P+ I T +SDVWSFGVVL+E+ T
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P GD T +VA+K+L G + + E+Q L L +
Sbjct: 17 QLGKGNFGSVELCRYDPL-GDNT--GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY- 204
VK G G + ++ LV E++ + L D L R L A+ L Y
Sbjct: 74 VKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYS 120
Query: 205 --LHEGLEV----QVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV--STAVVG 256
+ +G+E + ++RD A N+L++ K++DFGLA+ P+ +V
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ + + +SDVWSFGVVLYE+ T
Sbjct: 181 IFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 37/253 (14%)
Query: 55 IPELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSI-KPAAGDGTSEATV 113
+P + + K L+ S S +R M ++GE FG VYK + PA G+ T
Sbjct: 9 MPLINQHKQAKLKEISLSAVR-------FMEELGEDRFGKVYKGHLFGPAPGEQTQ---A 58
Query: 114 VAIKKLNRDGLQG--HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVY----- 166
VAIK L +D +G +++ E L+HPN+V L+G V ++ + + Y
Sbjct: 59 VAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNVVCLLG--VVTKDQPLSMIFSYCSHGD 115
Query: 167 --EFMLNRSL--------EDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYR 216
EF++ RS +D A P +H++ A G+ YL V+++
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEP---PDFVHLVAQIAAGMEYLSSH---HVVHK 169
Query: 217 DFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD 276
D NVL+ + K+SD GL RE + + + + AP+ I G + SD
Sbjct: 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 229
Query: 277 VWSFGVVLYEMLT 289
+WS+GVVL+E+ +
Sbjct: 230 IWSYGVVLWEVFS 242
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD----GLQGHKQWVA 132
+ +F ++ KIGEG +G VYK+ K VVA+KK+ D G+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNK-------LTGEVVALKKIRLDTETEGVPSTA--IR 54
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L L HPN+VKL+ + + LV+E + ++ L+ + A +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTEN----KLYLVFEHV-DQDLKKFMDASALTGIPLPLIK 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ +GLA+ H +V++RD K N+L++ KL+DFGLAR + T+
Sbjct: 110 SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 253 AVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSL 294
V T Y AP+ + + + D+WS G + EM+T RR+L
Sbjct: 167 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
+IG G FG+VYK GD V I K+ + + + EV L H N+
Sbjct: 43 RIGSGSFGTVYKGKWH---GD-----VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ +GY D +V ++ SL HL + + I A+G+ YL
Sbjct: 95 LLFMGYMTKDN-----LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYL 148
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
H +I+RD K++N+ L E K+ DFGLA + G+ + AP+
Sbjct: 149 HAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 266 I---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGLI 322
I + + +SDV+S+G+VLYE++TG L + +++ V + A
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMVGRGYA-------- 255
Query: 323 MDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
P L K Y N + + RL +C+ K ++RP Q++ ++
Sbjct: 256 -SPDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 44/299 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P GD T +VA+K+L G + + E+Q L L +
Sbjct: 30 QLGKGNFGSVELCRYDPL-GDNT--GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY- 204
VK G G + ++ LV E++ + L D L R L A+ L Y
Sbjct: 87 VKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYS 133
Query: 205 --LHEGLEV----QVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV--STAVVG 256
+ +G+E + ++RD A N+L++ K++DFGLA+ P+ +V
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE-QRLLEWVQQYPAD 315
F YA P+ + + +SDVWSFGVVLYE+ T + P E R++ + PA
Sbjct: 194 IFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT--YCDKSCSPSAEFLRMMGCERDVPAL 250
Query: 316 SKKFG-------LIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
S+ L P E ++E K+ C + S +DRP S + +L +
Sbjct: 251 SRLLELLEEGQRLPAPPACPAE--VHELMKL------CWAPSPQDRPSFSALGPQLDML 301
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 78
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + L H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 79 LDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 249
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 250 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 295 IILERIEYCTQ 305
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 119
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+++ K+ DFG+AR G++ T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P +
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P GD T +VA+K+L G + + E+Q L L +
Sbjct: 18 QLGKGNFGSVELCRYDPL-GDNT--GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY- 204
VK G G + ++ LV E++ + L D L R L A+ L Y
Sbjct: 75 VKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYS 121
Query: 205 --LHEGLEV----QVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV--STAVVG 256
+ +G+E + ++RD A N+L++ K++DFGLA+ P+ +V
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ + + +SDVWSFGVVLYE+ T
Sbjct: 182 IFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL--QGHKQWVA-EVQF 136
DF +G+G F VY++ + VAIK +++ + G Q V EV+
Sbjct: 12 DFKVGNLLGKGSFAGVYRA-------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L+HP++++L Y E LV E N + +L NR P + R H +
Sbjct: 65 HCQLKHPSILELYNYF----EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMH 119
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
G+ YLH +++RD SN+LL N K++DFGLA + M H + + G
Sbjct: 120 QIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T Y +P+ +SDVWS G + Y +L GR + + K
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 92
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + L H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 93 LDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 263
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 264 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 309 IILERIEYCTQ 319
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 119
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+++ K+ DFG+AR G++ T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 34/319 (10%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
VF E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 63
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++RD A N ++ +F K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
R+ + + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 177 TRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
L E Q ++ + +MD + N ++ L C + K RP
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 359 QVVERLKQIVQVSNEGDSF 377
++V LK + S SF
Sbjct: 281 EIVNLLKDDLHPSFPEVSF 299
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 119
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+L+ K+ DFG+AR G++ T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 34/319 (10%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
VF E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 60
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 116
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++RD A N ++ +F K+ DFG+
Sbjct: 117 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGM 173
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
R+ + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 174 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 224
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
L E Q ++ + +MD + N ++ L C + K RP
Sbjct: 225 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFL 277
Query: 359 QVVERLKQIVQVSNEGDSF 377
++V LK + S SF
Sbjct: 278 EIVNLLKDDLHPSFPEVSF 296
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 119
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+++ K+ DFG+AR G++ T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 34/319 (10%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
VF E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 63
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++RD A N ++ +F K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
R+ + + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
L E Q ++ + +MD + N ++ L C + K RP
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 359 QVVERLKQIVQVSNEGDSF 377
++V LK + S SF
Sbjct: 281 EIVNLLKDDLHPSFPEVSF 299
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFLGVLEHPNL 145
IG+G FG VY D AIK L+R +Q + ++ E + L HPN+
Sbjct: 29 IGKGHFGVVYHGEYI----DQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
+ LIG G+ +L+ +M + L + + P K + L A G+ YL
Sbjct: 85 LALIGIML--PPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV-KDLISFGLQVARGMEYL 140
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE------GPMVGHTHVSTAVVGTFG 259
E + ++RD A N +LDE+F K++DFGLAR+ + H H V
Sbjct: 141 AEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV----K 193
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ A + ++T T KSDVWSFGV+L+E+LT
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 34/319 (10%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
VF E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 63
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++RD A N ++ +F K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
R+ + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
L E Q ++ + +MD + N ++ L C + K RP
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 359 QVVERLKQIVQVSNEGDSF 377
++V LK + S SF
Sbjct: 281 EIVNLLKDDLHPSFPEVSF 299
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 119
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+++ K+ DFG+AR G++ T
Sbjct: 120 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 141/316 (44%), Gaps = 34/316 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 83 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADS 316
+ +P+ ++ G T SDVWSFGVVL+E+ T + + + + +++L +V +
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPYQGLSNEQVLRFVME----- 248
Query: 317 KKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNEGDS 376
GL+ P N + L C + K RP +++ +K+ ++ S
Sbjct: 249 --GGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299
Query: 377 FDKTFEEICEEDPVEA 392
F + E E +PV A
Sbjct: 300 FYYSEENKMENNPVLA 315
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 18/231 (7%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
VF E A + ++G+G FG VY+ K D T VAIK +N ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRE 62
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L++ E M L+ +L
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEME 118
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N P + + A+G+AYL+ + ++RD A N ++ E+F K+ DFG+
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 175
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
R+ + + + +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 176 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 36/293 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFLGVLEHPNL 145
+G G FG VY+ + D + VA+K L Q ++ E + H N+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKTR----LHIILGAAE 200
V+ IG + + R ++ E M L+ L R P P LH+ A
Sbjct: 123 VRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
G YL E I+RD A N LL K+ DFG+AR+ + +
Sbjct: 179 GCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 235
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADS 316
+ P+ G T+K+D WSFGV+L+E+ + G K+ Q +LE+V
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFVTS----- 287
Query: 317 KKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
G MDP N + R+ C +DRP + ++ER++ Q
Sbjct: 288 ---GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 331
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 77
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 78 LDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 248
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 249 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 294 IILERIEYCTQ 304
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 77
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 78 LDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 248
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 249 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 294 IILERIEYCTQ 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 78
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 79 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 192 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 249
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 250 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 295 IILERIEYCTQ 305
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 30/224 (13%)
Query: 84 MLKIGEGGFGSVYKSSI-KPAAGDGTSEATVVAIKKLNRDGLQG--HKQWVAEVQFLGVL 140
M ++GE FG VYK + PA G+ T VAIK L +D +G +++ E L
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQ---AVAIKTL-KDKAEGPLREEFRHEAMLRARL 69
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVY-------EFMLNRSL--------EDHLFNRAFPP 185
+HPN+V L+G V ++ + + Y EF++ RS +D A P
Sbjct: 70 QHPNVVCLLG--VVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMV 245
+H++ A G+ YL V+++D NVL+ + K+SD GL RE
Sbjct: 128 ---PDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 246 GHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ + + + AP+ I G + SD+WS+GVVL+E+ +
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 94
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 95 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 150
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 208 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 265
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 266 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 310
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 311 IILERIEYCTQ 321
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 66 LRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GL 124
LR+ +E+R+ +G G FG+VYK P DG + VAIK L +
Sbjct: 11 LRILKETELRKVK-------VLGSGAFGTVYKGIWIP---DGENVKIPVAIKVLRENTSP 60
Query: 125 QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP 184
+ +K+ + E + + P + +L+G C + + +L+ Y +L+ E NR
Sbjct: 61 KANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRE----NRGR- 115
Query: 185 PLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
L + L+ + A+G++YL + V++++RD A NVL+ K++DFGLAR +
Sbjct: 116 -LGSQDLLNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ + + A + I T +SDVWS+GV ++E++T
Sbjct: 172 DETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 84
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 85 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 140
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 198 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 255
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 256 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 300
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 301 IILERIEYCTQ 311
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 92
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 93 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 263
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 264 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 309 IILERIEYCTQ 319
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E Q L HP +V + + G +V E++ +L D + P+ K +
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAI 136
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+I A + L + H+ +I+RD K +N+++ K+ DFG+AR G++ T
Sbjct: 137 EVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 253 A-VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
A V+GT Y +P+ + A+SDV+S G VLYE+LTG + P
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 69
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 70 LDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
R+ + + + P+ G T+K+D WSFGV+L+E+ +
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPS 240
Query: 300 KTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQ 359
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 241 KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFAI 286
Query: 360 VVERLKQIVQ 369
++ER++ Q
Sbjct: 287 ILERIEYCTQ 296
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGVLEHPN 144
++G GGFG V + I G+ VAIK+ ++ + ++W E+Q + L HPN
Sbjct: 21 RLGTGGFGYVLRW-IHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 145 LVKLIGYCAVDGERGIQRL-------LVYEFMLNRSLEDHL--FNRA--FPPLPWKTRLH 193
+V A + G+Q+L L E+ L +L F P +T L
Sbjct: 74 VVS-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHV 250
I A L YLHE ++I+RD K N++L + K+ D G A+E + +
Sbjct: 129 DISSA---LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGEL 179
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
T VGT Y AP+ +E T D WSFG + +E +TG R N
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQFLGVLEHPN 144
++G GGFG V + I G+ VAIK+ ++ + ++W E+Q + L HPN
Sbjct: 22 RLGTGGFGYVLRW-IHQDTGEQ------VAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 145 LVKLIGYCAVDGERGIQRL-------LVYEFMLNRSLEDHL--FNRA--FPPLPWKTRLH 193
+V A + G+Q+L L E+ L +L F P +T L
Sbjct: 75 VVS-----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHV 250
I A L YLHE ++I+RD K N++L + K+ D G A+E + +
Sbjct: 130 DISSA---LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE---LDQGEL 180
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
T VGT Y AP+ +E T D WSFG + +E +TG R N
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVYSEQDE 92
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 93 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
R+ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 263
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 264 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 309 IILERIEYCTQ 319
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 74
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 75 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ +
Sbjct: 131 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 188 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 34/301 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ + + G +E T VA+K +N L+ +++ E + +
Sbjct: 23 ELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L+V E M + L+ +L N PP + + +
Sbjct: 81 VVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ +F K+ DFG+ R+ + +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADS 316
+ AP+ ++ G T SD+WSFGVVL+E+ + L E Q ++
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNE 238
Query: 317 KKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNEGDS 376
+ +MD + N ++ L C + K RP ++V LK + S S
Sbjct: 239 QVLKFVMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 297
Query: 377 F 377
F
Sbjct: 298 F 298
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 77 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 90 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 145
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FGSV P GD T +VA+K+L G + + E+Q L L +
Sbjct: 14 QLGKGNFGSVELCRYDPL-GDNT--GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY- 204
VK G G ++ LV E++ + L D L R L A+ L Y
Sbjct: 71 VKYRGVSYGPGRPELR--LVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYS 117
Query: 205 --LHEGLEV----QVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV--STAVVG 256
+ +G+E + ++RD A N+L++ K++DFGLA+ P+ V
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
F YA P+ + + +SDVWSFGVVLYE+ T
Sbjct: 178 IFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+ F + +G+G FG V+ +K +G + + + K ++ + E L
Sbjct: 24 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+ HP +VKL +G + L+ +F+ L F R + + T +
Sbjct: 82 EVNHPFIVKLHYAFQTEG----KLYLILDFLRGGDL----FTRLSKEVMF-TEEDVKFYL 132
Query: 199 AE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
AE L +LH + +IYRD K N+LLDE KL+DFGL++E + H + +
Sbjct: 133 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES--IDHEKKAYSFC 187
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLE 307
GT Y AP+ + T +D WSFGV+++EMLTG + ++R +T +L+
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 84 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 196
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 90 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 202
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 32/237 (13%)
Query: 61 EKAHNL--RVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK 118
EKA+ + R+F +E+R ++ +G G FG+V+K P +G S V IK
Sbjct: 18 EKANKVLARIFKETELR-------KLKVLGSGVFGTVHKGVWIP---EGESIKIPVCIKV 67
Query: 119 L-NRDGLQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDH 177
+ ++ G Q + + +G L+H ++V+L+G C G LV +++ SL DH
Sbjct: 68 IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDH 122
Query: 178 LFNR--AFPP---LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPK 232
+ A P L W ++ A+G+ YL E +++R+ A NVLL + +
Sbjct: 123 VRQHRGALGPQLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQ 173
Query: 233 LSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
++DFG+A P + + + A + I G T +SDVWS+GV ++E++T
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 84 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ +
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 196
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 82
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 83 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 139 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V+ + + T VAIK L + G + ++ E Q + L+H L
Sbjct: 16 RLGNGQFGEVWMGT--------WNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKL 66
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V+L AV E I +V E+M SL D L + L + + A G+AY+
Sbjct: 67 VQLY---AVVSEEPI--YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT---FGYAA 262
+ I+RD +++N+L+ K++DFGLAR + + TA G + A
Sbjct: 122 ER---MNYIHRDLRSANILVGNGLICKIADFGLAR----LIEDNEXTARQGAKFPIKWTA 174
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTGRR 292
P+ G T KSDVWSFG++L E++T R
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+ F + +G+G FG V+ +K +G + + + K ++ + E L
Sbjct: 25 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+ HP +VKL +G + L+ +F+ L F R + + T +
Sbjct: 83 EVNHPFIVKLHYAFQTEG----KLYLILDFLRGGDL----FTRLSKEVMF-TEEDVKFYL 133
Query: 199 AE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
AE L +LH + +IYRD K N+LLDE KL+DFGL++E + H + +
Sbjct: 134 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES--IDHEKKAYSFC 188
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLE 307
GT Y AP+ + T +D WSFGV+++EMLTG + ++R +T +L+
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+ F + +G+G FG V+ +K +G + + + K ++ + E L
Sbjct: 24 SQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+ HP +VKL +G + L+ +F+ L F R + + T +
Sbjct: 82 EVNHPFIVKLHYAFQTEG----KLYLILDFLRGGDL----FTRLSKEVMF-TEEDVKFYL 132
Query: 199 AE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
AE L +LH + +IYRD K N+LLDE KL+DFGL++E + H + +
Sbjct: 133 AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES--IDHEKKAYSFC 187
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLE 307
GT Y AP+ + T +D WSFGV+++EMLTG + ++R +T +L+
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 24/219 (10%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
M + + + ++G G FG V K G + V K+ ++G ++ E
Sbjct: 3 MELKREEITLLKELGSGQFGVV-----KLGKWKGQYDVAV----KMIKEGSMSEDEFFQE 53
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
Q + L HP LVK G C+ + +V E++ N L ++L + P L
Sbjct: 54 AQTMMKLSHPKLVKFYGVCS----KEYPIYIVTEYISNGCLLNYLRSHGKGLEP-SQLLE 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
+ EG+A+L Q I+RD A N L+D + K+SDFG+ R ++ +VS+
Sbjct: 109 MCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS- 162
Query: 254 VVGT---FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
VGT ++AP+ ++KSDVW+FG++++E+ +
Sbjct: 163 -VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 80 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 135
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 136 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 192
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 193 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 112 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 167
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N ++ E+F K+ DFG+ R+ + +
Sbjct: 168 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 224
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 28/235 (11%)
Query: 81 FSRMLKIGEGGFGSVY--KSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQ--F 136
F + +G+G FG V+ + +P +G + A+K L + L+ + +++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGH------LYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L + HP +VKL +G + L+ +F+ L F R + + T +
Sbjct: 84 LADVNHPFVVKLHYAFQTEG----KLYLILDFLRGGDL----FTRLSKEVMF-TEEDVKF 134
Query: 197 GAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
AE GL +LH + +IYRD K N+LLDE KL+DFGL++E + H + +
Sbjct: 135 YLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEA--IDHEKKAYS 189
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLE 307
GT Y AP+ + + +D WS+GV+++EMLTG + ++R +T +L+
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 54 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 144 NLVKLIGYCAVDGE-RGIQRLLVYEFMLN---RSLEDHLFNRAFPPLPWKTRLHIILGAA 199
N+V L+G C G I Y +LN R E L PL + LH A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+A+L I+RD A NVLL K+ DFGLAR+ + V
Sbjct: 171 QGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWS+G++L+E+ +
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 70 SYSEMRQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGH 127
S S++++ + + + +G G FG VY+ + D + VA+K L Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS--PLQVAVKTLPEVCSEQDE 78
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPL 186
++ E + H N+V+ IG + + R ++ E M L+ L R P
Sbjct: 79 LDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 187 PWKTR----LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLA 239
P LH+ A G YL E I+RD A N LL K+ DFG+A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNR 298
++ + + + P+ G T+K+D WSFGV+L+E+ + G
Sbjct: 192 QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-- 249
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMS 358
K+ Q +LE+V G MDP N + R+ C +DRP +
Sbjct: 250 -KSNQEVLEFVTS--------GGRMDP------PKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 359 QVVERLKQIVQ 369
++ER++ Q
Sbjct: 295 IILERIEYCTQ 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 75 RQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWV 131
R DF+ ++ +G+G FG V + K GT E + AIK L +D + + +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRK-----GTEE--LYAIKILKKDVVIQDDDVECTM 67
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKT 190
E + L +L+ P + + C + + RL V E++ L H+ P
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCF----QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP--- 120
Query: 191 RLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ AAE GL +LH+ +IYRD K NV+LD K++DFG+ +E M G
Sbjct: 121 --QAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV 175
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLL 306
T + GT Y AP+ I D W++GV+LYEML G+ + + + Q ++
Sbjct: 176 T--TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
Query: 307 EWVQQYPADSKK 318
E YP K
Sbjct: 234 EHNVSYPKSLSK 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 18/231 (7%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
V+ E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 63
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++RD A N ++ +F K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
R+ + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 46 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 144 NLVKLIGYCAVDGE-RGIQRLLVYEFMLN---RSLEDHLFNRAFPPLPWKTRLHIILGAA 199
N+V L+G C G I Y +LN R E L PL + LH A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+A+L I+RD A NVLL K+ DFGLAR+ + V
Sbjct: 163 QGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPA---DS 316
+ AP+ I T +SDVWS+G++L+E+ SL N YP +S
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-------------PYPGILVNS 262
Query: 317 KKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
K + L+ D + + + I + C + RP Q+ L++ Q
Sbjct: 263 KFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 314
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG K + + V+ +K+L R + + ++ EV+ + LEHPN++
Sbjct: 18 LGKGCFGQAIKVTHR-------ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 147 KLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
K IG D +RL + E++ +L + PW R+ A G+AYL
Sbjct: 71 KFIGVLYKD-----KRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYL 124
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA------------ 253
H + +I+RD + N L+ EN ++DFGLAR MV
Sbjct: 125 H---SMNIIHRDLNSHNCLVRENKNVVVADFGLARL--MVDEKTQPEGLRSLKKPDRKKR 179
Query: 254 --VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
VVG + AP+ I K DV+SFG+VL E++
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 30/229 (13%)
Query: 67 RVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL-NRDGLQ 125
R+F +E+R ++ +G G FG+V+K P +G S V IK + ++ G Q
Sbjct: 8 RIFKETELR-------KLKVLGSGVFGTVHKGVWIP---EGESIKIPVCIKVIEDKSGRQ 57
Query: 126 GHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR--AF 183
+ + +G L+H ++V+L+G C G LV +++ SL DH+ A
Sbjct: 58 SFQAVTDHMLAIGSLDHAHIVRLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 184 PP---LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR 240
P L W ++ A+G+ YL E +++R+ A NVLL + +++DFG+A
Sbjct: 113 GPQLLLNWGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 241 EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
P + + + A + I G T +SDVWS+GV ++E++T
Sbjct: 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPN 144
++G+G FG VY+ K D T VAIK +N ++ +++ E + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKD--EPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 76
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--------FNRAFPPLPWKTRLHIIL 196
+V+L+G + +G L++ E M L+ +L N P + +
Sbjct: 77 VVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
A+G+AYL+ + ++RD A N + E+F K+ DFG+ R+ + +
Sbjct: 133 EIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ +P+ ++ G T SDVWSFGVVL+E+ T
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK-QWVAEVQFLGV 139
+ ++ K+GEG + +VYK G +VA+K++ + +G + EV L
Sbjct: 4 YIKLDKLGEGTYATVYK-------GKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD 56
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L+H N+V L + + E+ + LV+E+ L++ L+ +L + +L +
Sbjct: 57 LKHANIVTL--HDIIHTEKSLT--LVFEY-LDKDLKQYLDDCGNIINMHNVKL-FLFQLL 110
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
GLAY H +V++RD K N+L++E KL+DFGLAR + T+ + V T
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLW 165
Query: 260 YAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
Y PD + + + + D+W G + YEM TGR
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK---QWVAEVQFLGVLEH 142
KIG G F VY+++ DG VA+KK+ L K + E+ L L H
Sbjct: 39 KIGRGQFSEVYRAA---CLLDGVP----VALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
PN++K D E I L L+R ++ F + +P +T + L
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKH--FKKQKRLIPERTVWKYFVQLCSAL 149
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
++H +V++RD K +NV + KL D GL R T + ++VGT Y +
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMS 204
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEM 287
P+ I KSD+WS G +LYEM
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 38/295 (12%)
Query: 75 RQATNDFSRMLKIGEGGFGSVY----KSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQW 130
+ + DF + +G G FG V+ + + + A + VV +K++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT 190
E L ++ HP ++++ G + Q ++ +++ L L P P
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTF----QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK 109
Query: 191 RLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
AAE L YLH +IYRD K N+LLD+N K++DFG A+ P
Sbjct: 110 -----FYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP---- 157
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLL 306
V+ + GT Y AP+ + T D WSFG+++YEML G + N KT +++L
Sbjct: 158 -DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
Query: 307 EWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
++P F + L + + + ++++G L + ++ K+ P +VV
Sbjct: 217 NAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNG--TEDVKNHPWFKEVV 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 109/251 (43%), Gaps = 25/251 (9%)
Query: 50 TSPRGIPELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTS 109
++P PE EE A + + + A DF +G+G FG+VY + K
Sbjct: 7 SAPENNPE--EELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREK-------Q 57
Query: 110 EATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVY 166
++A+K L + L+ Q EV+ L HPN+++L GY D R L+
Sbjct: 58 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LIL 113
Query: 167 EFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD 226
E+ ++ L + + I A L+Y H +VI+RD K N+LL
Sbjct: 114 EYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG 168
Query: 227 ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYE 286
K++DFG + P + T + GT Y P+ IE K D+WS GV+ YE
Sbjct: 169 SAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 287 MLTGRRSLERN 297
L G+ E N
Sbjct: 225 FLVGKPPFEAN 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 57
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ + L +
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPRGEVYKEL--QKLSKFD 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 110
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG-H 247
G AEG+ YL + I+RD A N+LL K+ DFGL R P H
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ F + AP+ ++T + SD W FGV L+EM T
Sbjct: 168 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 17 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 69
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 70 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 123
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 124 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 176
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
Query: 72 SEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV 131
S +Q F + K+GEG +GSVYK+ K +VAIK++ + ++ +
Sbjct: 22 SLTKQPEEVFDVLEKLGEGSYGSVYKAIHK-------ETGQIVAIKQVPVES--DLQEII 72
Query: 132 AEVQFLGVLEHPNLVKLIG-------------YCAVDGERGIQRLLVYEFMLNRSL-EDH 177
E+ + + P++VK G YC I RL N++L ED
Sbjct: 73 KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR------NKTLTEDE 126
Query: 178 LFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
+ I+ +GL YLH ++ I+RD KA N+LL+ KL+DFG
Sbjct: 127 IAT-------------ILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFG 170
Query: 238 LAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
+A G + V+GT + AP+ I+ +D+WS G+ EM G+
Sbjct: 171 VA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ KIG+G FG V+K G VVAIK ++ + + + + E+ L
Sbjct: 9 FTKLEKIGKGSFGEVFK-------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ P + K G D + I + E++ S D L T L IL
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILREIL--- 114
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E+ KL+DFG+A G + VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 169
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
+ AP+ I+ +K+D+WS G+ E+ G P +E ++ + P ++
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP-- 221
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P LE YS + + + CL+K RP ++++
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 114
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
G AEG+ YL + I+RD A N+LL K+ DFGL R P
Sbjct: 115 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 249 HVSTAVVGT-FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+V F + AP+ ++T + SD W FGV L+EM T
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 128/297 (43%), Gaps = 38/297 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 54 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 144 NLVKLIGYCAVDGE-RGIQRLLVYEFMLN------RSLE-DHLFNRAFPPLPWKTRLHII 195
N+V L+G C G I Y +LN R LE D F A L + LH
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
A+G+A+L I+RD A NVLL K+ DFGLAR+ + V
Sbjct: 171 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPA- 314
+ AP+ I T +SDVWS+G++L+E+ SL N YP
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-------------PYPGI 270
Query: 315 --DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+SK + L+ D + + + I + C + RP Q+ L++ Q
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 120
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG-H 247
G AEG+ YL + I+RD A N+LL K+ DFGL R P H
Sbjct: 121 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ F + AP+ ++T + SD W FGV L+EM T
Sbjct: 178 XVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 110
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
G AEG+ YL + I+RD A N+LL K+ DFGL R P
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 249 HVSTAVVGT-FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+V F + AP+ ++T + SD W FGV L+EM T
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ KIG+G FG V+K G VVAIK ++ + + + + E+ L
Sbjct: 24 FTKLEKIGKGSFGEVFK-------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 76
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ P + K G D + I + E++ S D L T L IL
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILREIL--- 129
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E+ KL+DFG+A G + VGT
Sbjct: 130 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 184
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
+ AP+ I+ +K+D+WS G+ E+ G P +E ++ + P ++
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP-- 236
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P LE YS + + + CL+K RP ++++
Sbjct: 237 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ KIG+G FG V+K G VVAIK ++ + + + + E+ L
Sbjct: 29 FTKLEKIGKGSFGEVFK-------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ P + K G D + I + E++ S D L T L IL
Sbjct: 82 CDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILREIL--- 134
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E+ KL+DFG+A G + VGT
Sbjct: 135 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 189
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
+ AP+ I+ +K+D+WS G+ E+ G P +E ++ + P ++
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP-- 241
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P LE YS + + + CL+K RP ++++
Sbjct: 242 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 114
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
G AEG+ YL + I+RD A N+LL K+ DFGL R P
Sbjct: 115 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 249 HVSTAVVGT-FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+V F + AP+ ++T + SD W FGV L+EM T
Sbjct: 172 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 110
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
G AEG+ YL + I+RD A N+LL K+ DFGL R P
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 249 HVSTAVVGT-FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+V F + AP+ ++T + SD W FGV L+EM T
Sbjct: 168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 123
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
AEG+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 124 ---AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 178 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 37/283 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ KIG+G FG V+K G VVAIK ++ + + + + E+ L
Sbjct: 9 FTKLEKIGKGSFGEVFK-------GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ P + K G D + I + E++ S D L T L IL
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILREIL--- 114
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E+ KL+DFG+A G + VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 169
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
+ AP+ I+ +K+D+WS G+ E+ G P +E ++ + P ++
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGE------PPHSELHPMKVLFLIPKNNP-- 221
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P LE YS + + + CL+K RP ++++
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 55
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 109
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 162
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 32/212 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-------RDGLQGHKQWVAEVQFLGV 139
+GEG F +VYK+ K + +VAIKK+ +DG+ ++ + E++ L
Sbjct: 18 LGEGQFATVYKARDK-------NTNQIVAIKKIKLGHRSEAKDGI--NRTALREIKLLQE 68
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L HPN++ L+ A + I LV++FM LE + + + P + ++++
Sbjct: 69 LSHPNIIGLLD--AFGHKSNIS--LVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM-TL 122
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--GPMVGHTHVSTAVVGT 257
+GL YLH+ +++RD K +N+LLDEN KL+DFGLA+ P + H V T
Sbjct: 123 QGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH----QVVT 175
Query: 258 FGYAAPDYIETGHLTAKS-DVWSFGVVLYEML 288
Y AP+ + + D+W+ G +L E+L
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQF 136
D + K+G+G FG V + +G S VA+K L D L + ++ EV
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVS----VAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ L+H NL++L G + + L +L+R L H + H +L
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR-LRKH-------------QGHFLL 120
Query: 197 GA--------AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
G AEG+ YL + I+RD A N+LL K+ DFGL R P
Sbjct: 121 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 249 HVSTAVVGT-FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+V F + AP+ ++T + SD W FGV L+EM T
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 57
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 57
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 109/251 (43%), Gaps = 27/251 (10%)
Query: 75 RQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWV 131
R DF+ ++ +G+G FG V S K GT E + A+K L +D + + +
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDE--LYAVKILKKDVVIQDDDVECTM 389
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR 191
E + L + P + + C +R V E++ L H+ P
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKEP---- 442
Query: 192 LHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
H + AAE GL +L +IYRD K NV+LD K++DFG+ +E G T
Sbjct: 443 -HAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLE 307
+ GT Y AP+ I D W+FGV+LYEML G+ E + + Q ++E
Sbjct: 499 --TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 308 WVQQYPADSKK 318
YP K
Sbjct: 557 HNVAYPKSMSK 567
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 31/253 (12%)
Query: 75 RQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWV 131
R DF+ ++ +G+G FG V S K GT E + A+K L +D + + +
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERK-----GTDE--LYAVKILKKDVVIQDDDVECTM 68
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWK 189
E + L + P + + C +R V E++ L H+ R P
Sbjct: 69 VEKRVLALPGKPPFLTQLHSCFQTMDR---LYFVMEYVNGGDLMYHIQQVGRFKEP---- 121
Query: 190 TRLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
H + AAE GL +L +IYRD K NV+LD K++DFG+ +E G
Sbjct: 122 ---HAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRL 305
T + GT Y AP+ I D W+FGV+LYEML G+ E + + Q +
Sbjct: 176 VT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
Query: 306 LEWVQQYPADSKK 318
+E YP K
Sbjct: 234 MEHNVAYPKSMSK 246
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINAM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 114 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
V+ E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 64
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 65 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++R+ A N ++ +F K+ DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGM 177
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
R+ + + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL---NRDGLQGHKQWVAEVQFLGVLEH 142
K+G GG +VY + T VAIK + R+ + K++ EV L H
Sbjct: 18 KLGGGGMSTVY-------LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
N+V +I VD E LV E++ +L +++ + PL T ++ +G+
Sbjct: 71 QNIVSMID---VDEEDDC-YYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGI 124
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
+ H+ +++++RD K N+L+D N K+ DFG+A+ T + V+GT Y +
Sbjct: 125 KHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFS 180
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLTG 290
P+ + +D++S G+VLYEML G
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 68 VFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQG 126
V+ E + + + ++G+G FG VY+ + + G +E T VA+K +N L+
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDII-KGEAE-TRVAVKTVNESASLRE 63
Query: 127 HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-------- 178
+++ E + ++V+L+G + +G L+V E M + L+ +L
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAE 119
Query: 179 FNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL 238
N PP + + + A+G+AYL+ + ++R+ A N ++ +F K+ DFG+
Sbjct: 120 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGM 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
R+ + + + AP+ ++ G T SD+WSFGVVL+E+ +
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 6 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 59
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 60 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 114
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 115 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 115
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 116 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 55
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 109
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 162
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 53
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 107
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 108 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 160
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 136
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 137 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 191 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 57
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 130
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 131 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 185 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 61/303 (20%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN--RDGLQGHKQWVAE 133
Q+ + R+ KIGEG FG K T + IK++N R + ++ E
Sbjct: 21 QSMEKYVRLQKIGEGSFG-------KAILVKSTEDGRQYVIKEINISRMSSKEREESRRE 73
Query: 134 VQFLGVLEHPNLVK-------------LIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFN 180
V L ++HPN+V+ ++ YC +G +R+ + +L + ED +
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYC--EGGDLFKRINAQKGVLFQ--EDQI-- 127
Query: 181 RAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR 240
L W ++ + L ++H+ ++++RD K+ N+ L ++ +L DFG+AR
Sbjct: 128 -----LDWFVQICL------ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 241 EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPK 300
+ ++ A +GT Y +P+ E KSD+W+ G VLYE+ T + + E K
Sbjct: 174 --VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK 231
Query: 301 TEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQV 360
+L+ + S F P + YS + + L ++ +DRP ++ +
Sbjct: 232 N--LVLKII------SGSF-----PPVSLHYSYD----LRSLVSQLFKRNPRDRPSVNSI 274
Query: 361 VER 363
+E+
Sbjct: 275 LEK 277
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 72 SEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HK 128
S+ + A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEH 57
Query: 129 QWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW 188
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDE 111
Query: 189 KTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
+ I A L+Y H +VI+RD K N+LL K++DFG + P +
Sbjct: 112 QRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----S 164
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 127
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 128 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 182 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTE 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 115
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 116 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 38/236 (16%)
Query: 72 SEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-- 129
S R ++F + +G+G FG V + +K GD + A+K L +D +
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVK-ETGD------LYAVKVLKKDVILQDDDVE 68
Query: 130 -WVAEVQFLGVL-EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-----FNRA 182
+ E + L + HP L +L +C + + V EF+ L H+ F+ A
Sbjct: 69 CTMTEKRILSLARNHPFLTQL--FCCF--QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA 124
Query: 183 FPPLPWKTRLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA 239
+ R + AAE L +LH+ +IYRD K NVLLD KL+DFG+
Sbjct: 125 ------RARFY----AAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMC 171
Query: 240 REGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
+EG G T + GT Y AP+ ++ D W+ GV+LYEML G E
Sbjct: 172 KEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 128/309 (41%), Gaps = 39/309 (12%)
Query: 63 AHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD 122
A +L S +R F + +G G +G VYK G + AIK ++
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYK-------GRHVKTGQLAAIKVMDVT 60
Query: 123 GLQGHKQWVAEVQFLGVLEHP-NLVKLIGYCAVDGERGI--QRLLVYEFMLNRSLEDHLF 179
G + ++ E+ L H N+ G G+ Q LV EF S+ D +
Sbjct: 61 GDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK 119
Query: 180 NRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGL- 238
N L + +I GL++LH+ +VI+RD K NVLL EN KL DFG+
Sbjct: 120 NTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Query: 239 AREGPMVGHTHVSTAVVGTFGYAAPDYIET-----GHLTAKSDVWSFGVVLYEMLTGRRS 293
A+ VG + +GT + AP+ I KSD+WS G+ EM G
Sbjct: 177 AQLDRTVGRRNT---FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 294 LERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKD 353
L P R L + + PA PRL+ S ++K ++CL K+
Sbjct: 234 LCDMHP---MRALFLIPRNPA----------PRLK---SKKWSKKFQSFIESCLVKNHSQ 277
Query: 354 RPKMSQVVE 362
RP Q+++
Sbjct: 278 RPATEQLMK 286
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 114 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 168
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 129
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 128
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 128
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 129
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 59
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 60 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 113
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P T +S
Sbjct: 114 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-- 168
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 169 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 115
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 116 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 77
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 132
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 133 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 187 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 129
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI--- 127
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 128 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 182 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 74
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 129
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 184 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 133
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 61
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 115
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + A
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAA 168
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 8 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKM 61
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 62 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 116
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 117 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 57
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 58 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 111
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 112 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 164
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTD 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 120
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 121 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 175 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTD 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 151
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 152 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 206 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 54 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 144 NLVKLIGYCAVDGE-RGIQRLLVYEFMLN------RSLE-DHLFNRAFPPLPWKTRLHII 195
N+V L+G C G I Y +LN R LE D F A + LH
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
A+G+A+L I+RD A NVLL K+ DFGLAR+ + V
Sbjct: 171 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPA- 314
+ AP+ I T +SDVWS+G++L+E+ SL N YP
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-------------PYPGI 270
Query: 315 --DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQ 369
+SK + L+ D + + + I + C + RP Q+ L++ Q
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
F + +G+GG+G V++ A G A V K + + AE L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
+HP +V LI G + L+ E++ L L T + +
Sbjct: 79 KHPFIVDLIYAFQTGG----KLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISM 132
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L +LH+ +IYRD K N++L+ KL+DFGL +E G V+ GT Y
Sbjct: 133 ALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFCGTIEY 187
Query: 261 AAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP 313
AP+ + +GH A D WS G ++Y+MLTG NR KT ++L+ P
Sbjct: 188 MAPEILMRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREK-------NSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DSTRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + A
Sbjct: 113 YITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAA 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 54
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 108
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K+++FG + P
Sbjct: 109 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---- 161
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG +G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAYGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP----PLPWKTRLHII 195
L H N+VK G+ E IQ L L LF+R P P P R
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLF-----LEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
L A G+ YLH + + +RD K N+LLDE K+SDFGLA + +
Sbjct: 113 LMA--GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMX 167
Query: 256 GTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
GT Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREK-------QSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + A
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAA 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 26/210 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHP 143
+GEG FG V K A T + VA+K ++R L+ H + E+ +L +L HP
Sbjct: 17 LGEGSFGKV-----KLATHYKTQQK--VALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
+++KL Y + I ++V E+ + + + + I+ A E
Sbjct: 70 HIIKL--YDVITTPTDI--VMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIE--- 122
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
Y H ++++RD K N+LLD+N K++DFGL+ M + T+ G+ YAAP
Sbjct: 123 YCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS--NIMTDGNFLKTS-CGSPNYAAP 176
Query: 264 DYIETGHLTA--KSDVWSFGVVLYEMLTGR 291
+ I G L A + DVWS G+VLY ML GR
Sbjct: 177 EVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ +IG+G FG V+K G VVAIK ++ + + + + E+ L
Sbjct: 25 FTKLERIGKGSFGEVFK-------GIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ + K G +G + ++ E++ S D L F T L IL
Sbjct: 78 CDSSYVTKYYGSYL----KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL--- 130
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E KL+DFG+A G + VGT
Sbjct: 131 KGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPF 185
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV-QQYPAD--- 315
+ AP+ I+ +K+D+WS G+ E+ G P R+L + + P
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP---MRVLFLIPKNNPPTLVG 242
Query: 316 --SKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQ 366
+K F +D L K+ S K L + K+SK ++++++R K+
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPTAK-ELLKHKFIVKNSKKTSYLTELIDRFKR 294
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTX 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 14/235 (5%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
F + +G+GG+G V++ A G A V K + + AE L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
+HP +V LI G + L+ E++ L L T + +
Sbjct: 79 KHPFIVDLIYAFQTGG----KLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISM 132
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L +LH+ +IYRD K N++L+ KL+DFGL +E G V+ GT Y
Sbjct: 133 ALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXFCGTIEY 187
Query: 261 AAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP 313
AP+ + +GH A D WS G ++Y+MLTG NR KT ++L+ P
Sbjct: 188 MAPEILMRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLG 138
DF +L G G F V + K +VAIK + ++ L+G + + E+ L
Sbjct: 21 DFRDVL--GTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPN+V L E G L+ + + L D + + F +RL I
Sbjct: 72 KIKHPNIVALDDIY----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQV 125
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVL---LDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+ + YLH+ + +++RD K N+L LDE+ + +SDFGL++ M V +
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTAC 179
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYPA 314
GT GY AP+ + + D WS GV+ Y +L G + N K +++L+ +Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEF 237
Query: 315 DSKKFGLIMD 324
DS + I D
Sbjct: 238 DSPYWDDISD 247
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLG 138
DF +L G G F V + K +VAIK + ++ L+G + + E+ L
Sbjct: 21 DFRDVL--GTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPN+V L E G L+ + + L D + + F +RL I
Sbjct: 72 KIKHPNIVALDDIY----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQV 125
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVL---LDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+ + YLH+ + +++RD K N+L LDE+ + +SDFGL++ M V +
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTAC 179
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYPA 314
GT GY AP+ + + D WS GV+ Y +L G + N K +++L+ +Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEF 237
Query: 315 DSKKFGLIMD 324
DS + I D
Sbjct: 238 DSPYWDDISD 247
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 33/294 (11%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQ-GHKQWVAEVQFL 137
+D+ IG G V + P + VAIK++N + Q + + E+Q +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAP-------KKEKVAIKRINLEKCQTSMDELLKEIQAM 67
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED---HLFNRA---FPPLPWKTR 191
HPN+V V E LV + + S+ D H+ + L T
Sbjct: 68 SQCHHPNIVSYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA---REGPMVGHT 248
I+ EGL YLH+ + I+RD KA N+LL E+ +++DFG++ G +
Sbjct: 124 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 249 HVSTAVVGTFGYAAPDYIETGH-LTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
V VGT + AP+ +E K+D+WSFG+ E+ TG + P ++L
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP---MKVLM 237
Query: 308 WVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
Q S + G + D + K+Y + ++ CL K + RP ++++
Sbjct: 238 LTLQNDPPSLETG-VQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K ++A+K L + L+ Q E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREK-------QRKFILALKVLFKAQLEKAGVEHQLRRE 55
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 56 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 109
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P + T
Sbjct: 110 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTT 162
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 25/251 (9%)
Query: 50 TSPRGIPELYEEKAHNLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTS 109
++P PE EE A + + + A DF +G+G FG+VY + K +
Sbjct: 7 SAPENNPE--EELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK----- 59
Query: 110 EATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVY 166
++A+K L + L+ Q EV+ L HPN+++L GY D R L+
Sbjct: 60 --FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LIL 113
Query: 167 EFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD 226
E+ ++ L + + I A L+Y H +VI+RD K N+LL
Sbjct: 114 EYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG 168
Query: 227 ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYE 286
K++DFG + P + + GT Y P+ IE K D+WS GV+ YE
Sbjct: 169 SAGELKIADFGWSVHAP----SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 287 MLTGRRSLERN 297
L G+ E N
Sbjct: 225 FLVGKPPFEAN 235
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 57
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ + L +
Sbjct: 58 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPRGEVYKEL--QKLSKFD 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 112 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 28/250 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLG 138
DF +L G G F V + K +VAIK + ++ L+G + + E+ L
Sbjct: 21 DFRDVL--GTGAFSEVILAEDK-------RTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
++HPN+V L E G L+ + + L D + + F +RL I
Sbjct: 72 KIKHPNIVALDDIY----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQV 125
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVL---LDENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
+ + YLH+ + +++RD K N+L LDE+ + +SDFGL++ M V +
Sbjct: 126 LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK---MEDPGSVLSTAC 179
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYPA 314
GT GY AP+ + + D WS GV+ Y +L G + N K +++L+ +Y
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK--AEYEF 237
Query: 315 DSKKFGLIMD 324
DS + I D
Sbjct: 238 DSPYWDDISD 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 54
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 55 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 108
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 109 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 161
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 162 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 53
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 54 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 107
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 108 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 160
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 55
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 109
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K+++FG + P
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---- 162
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ T + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 22/208 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+GEG FG V K + G + ++ K L + +QG + E+ +L +L HP+++
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 77
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGLAYL 205
KL Y + + I ++V E+ N L D++ R + I+ A E Y
Sbjct: 78 KL--YDVIKSKDEI--IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YC 129
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
H ++++RD K N+LLDE+ K++DFGL+ M + T+ G+ YAAP+
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLS--NIMTDGNFLKTS-CGSPNYAAPEV 183
Query: 266 IETGHLTA--KSDVWSFGVVLYEMLTGR 291
I +G L A + DVWS GV+LY ML R
Sbjct: 184 I-SGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 33/294 (11%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQ-GHKQWVAEVQFL 137
+D+ IG G V + P + VAIK++N + Q + + E+Q +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAP-------KKEKVAIKRINLEKCQTSMDELLKEIQAM 62
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED---HLFNRA---FPPLPWKTR 191
HPN+V V E LV + + S+ D H+ + L T
Sbjct: 63 SQCHHPNIVSYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 118
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA---REGPMVGHT 248
I+ EGL YLH+ + I+RD KA N+LL E+ +++DFG++ G +
Sbjct: 119 ATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 249 HVSTAVVGTFGYAAPDYIETGH-LTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
V VGT + AP+ +E K+D+WSFG+ E+ TG + P ++L
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP---MKVLM 232
Query: 308 WVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
Q S + G + D + K+Y + ++ CL K + RP ++++
Sbjct: 233 LTLQNDPPSLETG-VQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 16/243 (6%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
N F + +G+GGFG V ++ A G + ++K +G + E Q L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVR-ATGKMYA---CKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+ +V L A E LV M L+ H+++ P + A
Sbjct: 240 KVNSRFVVSL----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYA 292
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
AE L + +++YRD K N+LLD++ ++SD GLA P VGT
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTV 349
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE-WVQQYPAD-S 316
GY AP+ ++ T D W+ G +LYEM+ G+ ++ + K ++ +E V++ P + S
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 317 KKF 319
++F
Sbjct: 410 ERF 412
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK---QWVAEVQFLGVLEHP 143
+G G FG V G VA+K LNR ++ + E+Q L + HP
Sbjct: 24 LGVGTFGKV-------KVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
+++KL Y + I +V E++ L D++ L K + G+
Sbjct: 77 HIIKL--YQVISTPSDI--FMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVD 130
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
Y H + V++RD K NVLLD + K++DFGL+ M+ G+ YAAP
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSN---MMSDGEFLRXSCGSPNYAAP 184
Query: 264 DYIETGHLTA--KSDVWSFGVVLYEMLTG 290
+ I +G L A + D+WS GV+LY +L G
Sbjct: 185 EVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 22/208 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+GEG FG V K + G + ++ K L + +QG + E+ +L +L HP+++
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 76
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGLAYL 205
KL Y + + I ++V E+ N L D++ R + I+ A E Y
Sbjct: 77 KL--YDVIKSKDEI--IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YC 128
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
H ++++RD K N+LLDE+ K++DFGL+ M + T+ G+ YAAP+
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLS--NIMTDGNFLKTS-CGSPNYAAPEV 182
Query: 266 IETGHLTA--KSDVWSFGVVLYEMLTGR 291
I +G L A + DVWS GV+LY ML R
Sbjct: 183 I-SGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 22/208 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+GEG FG V K + G + ++ K L + +QG + E+ +L +L HP+++
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 67
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGLAYL 205
KL Y + + I ++V E+ N L D++ R + I+ A E Y
Sbjct: 68 KL--YDVIKSKDEI--IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YC 119
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
H ++++RD K N+LLDE+ K++DFGL+ M + T+ G+ YAAP+
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLS--NIMTDGNFLKTS-CGSPNYAAPEV 173
Query: 266 IETGHLTA--KSDVWSFGVVLYEMLTGR 291
I +G L A + DVWS GV+LY ML R
Sbjct: 174 I-SGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 88 GEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLVK 147
G+G FG+V G S VAIKK+ +D +++ + +Q L VL HPN+V+
Sbjct: 32 GQGTFGTV-------QLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQ 83
Query: 148 LIGYCAVDGE---RGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
L Y GE R I +V E++ L+R ++ + R P P ++ +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY-YRRQVAPPPILIKV-FLFQLIRS 141
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDE-NFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+ LH V V +RD K NVL++E + KL DFG A++ + + + A + + Y
Sbjct: 142 IGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK---LSPSEPNVAYICSRYY 197
Query: 261 AAPDYI-ETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ I H T D+WS G + EM+ G
Sbjct: 198 RAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 16/243 (6%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
N F + +G+GGFG V ++ A G + ++K +G + E Q L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVR-ATGKMYA---CKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+ +V L A E LV M L+ H+++ P + A
Sbjct: 240 KVNSRFVVSL----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYA 292
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
AE L + +++YRD K N+LLD++ ++SD GLA P VGT
Sbjct: 293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTV 349
Query: 259 GYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE-WVQQYPAD-S 316
GY AP+ ++ T D W+ G +LYEM+ G+ ++ + K ++ +E V++ P + S
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 317 KKF 319
++F
Sbjct: 410 ERF 412
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D+ + +GEG G V + A T EA V I + R + + E+ +
Sbjct: 7 DWDLVQTLGEGAAGEV-----QLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKM 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L H N+VK G+ E IQ L + E+ L D + P P R L A
Sbjct: 61 LNHENVVKFYGH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA- 115
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
G+ YLH + + +RD K N+LLDE K+SDFGLA + + GT
Sbjct: 116 -GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 260 YAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
Y AP+ ++ A+ DVWS G+VL ML G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAI +L + +K+ + E +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 160
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 161 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 215 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 113 VVAIKKLNRDGLQGHKQWVA-EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN 171
+VAIK + + L+G + + E+ L ++HPN+V L E G L+ + +
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY----ESGGHLYLIMQLVSG 100
Query: 172 RSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVL---LDEN 228
L D + + F +RL I + + YLH+ + +++RD K N+L LDE+
Sbjct: 101 GELFDRIVEKGFYTERDASRL--IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 229 FRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
+ +SDFGL++ M V + GT GY AP+ + + D WS GV+ Y +L
Sbjct: 156 SKIMISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 289 TGRRSL-ERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
G + N K +++L+ +Y DS + I D
Sbjct: 213 CGYPPFYDENDAKLFEQILK--AEYEFDSPYWDDISD 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 24/225 (10%)
Query: 75 RQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQW 130
RQ T DF +G+G FG+VY + + + ++A+K L + L+ Q
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSK-------FILALKVLFKTQLEKAGVEHQL 59
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT 190
EV+ L HPN+++L GY D R + +L Y + E +R +
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFH-DATR-VYLILEYAPLGTVYRELQKLSR----FDEQR 113
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
I A L+Y H +VI+RD K N+LL N K++DFG + P +
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSR 166
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
T + GT Y P+ IE K D+WS GV+ YE L G E
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++++ IGEG +G V ++ T VAIKK++ Q + Q + E+Q L
Sbjct: 45 YTQLQYIGEGAYGMV-------SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLR 97
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL------H 193
H N++ G R I R E M + + L L +L +
Sbjct: 98 FRHENVI---------GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY 148
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-EGPMVGHTHVST 252
+ GL Y+H V++RD K SN+L++ K+ DFGLAR P HT T
Sbjct: 149 FLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT 205
Query: 253 AVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 72 SEMRQ-ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---H 127
S+ RQ A DF +G+G FG+VY + K + ++A+K L + L+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVE 55
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
Q EV+ L HPN+++L GY D R L+ E+ ++ L +
Sbjct: 56 HQLRREVEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFD 109
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ I A L+Y H +VI+RD K N+LL K++DFG + P
Sbjct: 110 EQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 162
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ + GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 163 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 22/208 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+GEG FG V K + G + ++ K L + +QG + E+ +L +L HP+++
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVA-LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 71
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIILGAAEGLAYL 205
KL Y + + I ++V E+ N L D++ R + I+ A E Y
Sbjct: 72 KL--YDVIKSKDEI--IMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQQIISAVE---YC 123
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
H ++++RD K N+LLDE+ K++DFGL+ M + T+ G+ YAAP+
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLS--NIMTDGNFLKTS-CGSPNYAAPEV 177
Query: 266 IETGHLTA--KSDVWSFGVVLYEMLTGR 291
I +G L A + DVWS GV+LY ML R
Sbjct: 178 I-SGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 28/238 (11%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + I +LN LQ + EV+ +
Sbjct: 18 RLLKTIGKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMK 69
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
+L HPN+VKL + ++ E+ + L+ E+ + D+L +++ I+
Sbjct: 70 ILNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ ++++RD KA N+LLD + K++DFG + E + G A G
Sbjct: 126 AVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGA 176
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ--- 129
+++ DF +G+G FG V+ + K AIK L +D +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTN-------QFFAIKALKKDVVLMDDDVEC 64
Query: 130 WVAEVQFLGV-LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW 188
+ E + L + EHP L + +C + + V E++ L H+ + L
Sbjct: 65 TMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSR 120
Query: 189 KTRLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMV 245
T AAE GL +LH ++YRD K N+LLD++ K++DFG+ +E M+
Sbjct: 121 AT-----FYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN-ML 171
Query: 246 GHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
G + GT Y AP+ + D WSFGV+LYEML G+
Sbjct: 172 GDAK-TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ + G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ + G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 133
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ + G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 133
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFGLA+ G H
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 130
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 131 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 185 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 128
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 50/304 (16%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 54 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP---------------LPW 188
N+V L+G C G L++ E+ L + L R PP L
Sbjct: 111 NIVNLLGACT----HGGPVLVITEYCCYGDLLNFL-RRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 189 KTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
+ LH A+G+A+L I+RD A NVLL K+ DFGLAR+ +
Sbjct: 166 RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
V + AP+ I T +SDVWS+G++L+E+ SL N
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN----------- 267
Query: 309 VQQYPA---DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLK 365
YP +SK + L+ D + + + I + C + RP Q+ L+
Sbjct: 268 --PYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
Query: 366 QIVQ 369
+ Q
Sbjct: 325 EQAQ 328
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 128
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 126
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 181 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 128
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 183 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ--- 129
+++ DF +G+G FG V+ + K AIK L +D +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTN-------QFFAIKALKKDVVLMDDDVEC 63
Query: 130 WVAEVQFLGV-LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPW 188
+ E + L + EHP L + +C + + V E++ L H+ + L
Sbjct: 64 TMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKFDLSR 119
Query: 189 KTRLHIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMV 245
T AAE GL +LH ++YRD K N+LLD++ K++DFG+ +E M+
Sbjct: 120 AT-----FYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN-ML 170
Query: 246 GHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
G + GT Y AP+ + D WSFGV+LYEML G+
Sbjct: 171 GDAK-TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K + ++A+K L + L+ Q E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSK-------FILALKVLFKAQLEKAGVEHQLRRE 58
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 112
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P +
Sbjct: 113 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXX 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 45 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 97
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL------H 193
H N++ G I R E M + L HL L L +
Sbjct: 98 FRHENII---------GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 148
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVST 252
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 149 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 253 AVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQFL 137
+F ++ +G G FG+VYK P +G VAIK+L + +K+ + E +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIP---EGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLN--RSLEDHLFNRAFPPLPWKTRLHII 195
+++P++ +L+G C + I +L+ + +L+ R +D++ ++ L W ++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI--- 133
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAV 254
A+G+ YL + ++++RD A NVL+ K++DFG A+ G H
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
V + A + I T +SDVWS+GV ++E++T
Sbjct: 188 V-PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + A G
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDAFCGA 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 MSTDCENLLKKF-LILNP 252
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQF-L 137
D + +IG G +GSV K KP+ ++A+K++ + KQ + ++ +
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSG-------QIMAVKRIRSTVDEKEQKQLLMDLDVVM 75
Query: 138 GVLEHPNLVKLIGYCAVDGERGI-QRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+ P +V+ G +G+ I L+ F ++++ +P + I L
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSF---DKFYKYVYSVLDDVIPEEILGKITL 132
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
+ L +L E L ++I+RD K SN+LLD + KL DFG++ G +V T G
Sbjct: 133 ATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKTRDAG 187
Query: 257 TFGYAAPDYIETGH----LTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQY 312
Y AP+ I+ +SDVWS G+ LYE+ TGR PK + Q
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY----PKWNSVFDQLTQVV 243
Query: 313 PADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
D P+L + + CL+K RPK ++++
Sbjct: 244 KGDP--------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 28/238 (11%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + I +LN LQ + EV+ +
Sbjct: 15 RLLKTIGKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMK 66
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
+L HPN+VKL + ++ E+ + L+ E+ + D+L +++ I+
Sbjct: 67 ILNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ ++++RD KA N+LLD + K++DFG + E + G G+
Sbjct: 123 AVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD---TFCGS 173
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 174 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 127/306 (41%), Gaps = 47/306 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDGLQGHKQ-WVAEVQFLGVL-EHP 143
+G G FG V +++ A G G +A + VA+K L K+ ++E++ + L +H
Sbjct: 39 LGAGAFGKVVEAT---AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 144 NLVKLIGYCAVDGE-RGIQRLLVYEFMLN---RSLEDHLFNRAFP-------------PL 186
N+V L+G C G I Y +LN R E L P PL
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
+ LH A+G+A+L I+RD A NVLL K+ DFGLAR+
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
+ V + AP+ I T +SDVWS+G++L+E+ SL N
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN--------- 259
Query: 307 EWVQQYPA---DSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVER 363
YP +SK + L+ D + + + I + C + RP Q+
Sbjct: 260 ----PYPGILVNSKFYKLVKDGYQMAQPAF-APKNIYSIMQACWALEPTHRPTFQQICSF 314
Query: 364 LKQIVQ 369
L++ Q
Sbjct: 315 LQEQAQ 320
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 36 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT----------RLH 193
N+V L+G C + G +++ EF +L +L ++ +P+KT H
Sbjct: 93 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 194 II---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 150 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 37/283 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA-EVQFLGV 139
F+++ +IG+G FG VYK G VVAIK ++ + + + + E+ L
Sbjct: 21 FTKLDRIGKGSFGEVYK-------GIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ 73
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
+ P + + G + + ++ E++ S D L T L IL
Sbjct: 74 CDSPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL--- 126
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+GL YLH + I+RD KA+NVLL E KL+DFG+A G + VGT
Sbjct: 127 KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPF 181
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
+ AP+ I+ K+D+WS G+ E+ G P ++ + + P +S
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKG------EPPNSDLHPMRVLFLIPKNSP-- 233
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P LE ++S + + CL+K + RP ++++
Sbjct: 234 -----PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH E V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 318
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH E V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 315
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 26 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 83 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 35 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 92 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 52/236 (22%)
Query: 87 IGEGGFGSVYKSS---IKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEH 142
+GEG FG V K++ +K AG T VA+K L + + ++E L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAG-----YTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE-------------------------DH 177
P+++KL G C+ DG LL+ E+ SL DH
Sbjct: 86 PHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 178 LFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
RA L + ++G+ YL E +++++RD A N+L+ E + K+SDFG
Sbjct: 142 PDERA---LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 238 LAR----EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
L+R E V + V + D+I T +SDVWSFGV+L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI----YTTQSDVWSFGVLLWEIVT 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 153 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 205
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V G + +V EF+ +L D + + TR++ +
Sbjct: 206 QHENVVEMYNSYLV----GDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAV 252
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 253 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 307
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 27 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLA 79
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 132 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 26 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 83 NVVNLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAE 133
A DF +G+G FG+VY + K ++A+K L + L+ Q E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREK-------QSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
V+ L HPN+++L GY D R L+ E+ ++ L + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFH-DATRVY---LILEYAPLGTVYREL--QKLSKFDEQRTAT 115
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I A L+Y H +VI+RD K N+LL K++DFG + P +
Sbjct: 116 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDD 168
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERN 297
+ GT Y P+ IE K D+WS GV+ YE L G+ E N
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL----------NRDGLQGHKQW 130
+ ++ K+G G +G V K +G SE + IKK N++ + H++
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEK----NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWK 189
E+ L L+HPN++KL E LV EF L + + NR F
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVF----EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN---FRPKLSDFGLAREGPMVG 246
+ IL G+ YLH+ +++RD K N+LL+ K+ DFGL+
Sbjct: 150 NIMKQILS---GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS---SFFS 200
Query: 247 HTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ +GT Y AP+ ++ + K DVWS GV++Y +L G
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 52/236 (22%)
Query: 87 IGEGGFGSVYKSS---IKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEH 142
+GEG FG V K++ +K AG T VA+K L + + ++E L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAG-----YTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE-------------------------DH 177
P+++KL G C+ DG LL+ E+ SL DH
Sbjct: 86 PHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 178 LFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
RA L + ++G+ YL E +++++RD A N+L+ E + K+SDFG
Sbjct: 142 PDERA---LTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 238 LAR----EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
L+R E V + V + D+I T +SDVWSFGV+L+E++T
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI----YTTQSDVWSFGVLLWEIVT 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 37 LGRGAFGQVIEAD---AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK---------TRLHI 194
N+V L+G C + G +++ EF +L +L ++ +P+K T H+
Sbjct: 94 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 195 I---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 151 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 99/225 (44%), Gaps = 24/225 (10%)
Query: 75 RQAT-NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQW 130
RQ T DF +G+G FG+VY + + + ++A+K L + L+ Q
Sbjct: 7 RQWTLEDFDIGRPLGKGKFGNVYLARERQSK-------FILALKVLFKTQLEKAGVEHQL 59
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT 190
EV+ L HPN+++L GY D R + +L Y + E +R +
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFH-DATR-VYLILEYAPLGTVYRELQKLSR----FDEQR 113
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
I A L+Y H +VI+RD K N+LL N K++DFG + P +
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSR 166
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
+ GT Y P+ IE K D+WS GV+ YE L G E
Sbjct: 167 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 52/236 (22%)
Query: 87 IGEGGFGSVYKSS---IKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEH 142
+GEG FG V K++ +K AG T VA+K L + + ++E L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAG-----YTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE-------------------------DH 177
P+++KL G C+ DG LL+ E+ SL DH
Sbjct: 86 PHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 178 LFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG 237
RA L + ++G+ YL E + +++RD A N+L+ E + K+SDFG
Sbjct: 142 PDERA---LTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 238 LAR----EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
L+R E V + V + D+I T +SDVWSFGV+L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI----YTTQSDVWSFGVLLWEIVT 247
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 80 DFSRML-KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
DF ++ ++G+G FG VYK+ K + + A K ++ + + ++ E+ L
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETS-------VLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+HPN+VKL+ A E + L+ EF +++ + P ++++ ++
Sbjct: 90 SCDHPNIVKLLD--AFYYENNLWILI--EFCAGGAVDAVMLELERPLT--ESQIQVVCKQ 143
Query: 199 A-EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
+ L YLH+ ++I+RD KA N+L + KL+DFG++ + S +GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGT 198
Query: 258 FGYAAPDYI--ETGH---LTAKSDVWSFGVVLYEM 287
+ AP+ + ET K+DVWS G+ L EM
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + G+
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDTFCGS 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 MSTDCENLLKKF-LILNP 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH E V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 175
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 35 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 92 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH E V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 176
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + G+
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDTFCGS 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 MSTDCENLLKKF-LILNP 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH E V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 177
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 35 LGRGAFGQVIEAD---AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
N+V L+G C + G +++ EF +L +L ++ +P+K L +
Sbjct: 92 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 204 Y---LHEGLEV----QVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
Y + +G+E + I+RD A N+LL E K+ DFGLAR+
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 27 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLA 79
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 132 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 25 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 130 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 80 DFSRML-KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
DF ++ ++G+G FG VYK+ K + + A K ++ + + ++ E+ L
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETS-------VLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+HPN+VKL+ A E + L+ EF +++ + P ++++ ++
Sbjct: 90 SCDHPNIVKLLD--AFYYENNLWILI--EFCAGGAVDAVMLELERPLT--ESQIQVVCKQ 143
Query: 199 A-EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
+ L YLH+ ++I+RD KA N+L + KL+DFG++ + + +GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRXIQRRDSFIGT 198
Query: 258 FGYAAPDYI--ETGH---LTAKSDVWSFGVVLYEM 287
+ AP+ + ET K+DVWS G+ L EM
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + G+
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDTFCGS 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 MSTDCENLLKKF-LILNP 252
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 25 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 130 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 42/285 (14%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
DF + +G GGFG V+++ K D + A + I+ NR+ ++ + EV+ L
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNK---VDDCNYA-IKRIRLPNRE--LAREKVMREVKALA 58
Query: 139 VLEHPNLVKLI-GYCAVDGERGIQ----RLLVY-EFMLNR--SLEDHLFNRAFPPLPWKT 190
LEHP +V+ + + +Q ++ +Y + L R +L+D + R + +
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERE 116
Query: 191 R---LHIILGAAEGLAYLH-EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE----- 241
R LHI L AE + +LH +GL ++RD K SN+ + K+ DFGL
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 242 ------GPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRS-L 294
PM + T VGT Y +P+ I + K D++S G++L+E+L + +
Sbjct: 173 EEQTVLTPMPAYAR-HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQM 231
Query: 295 ERNRPKTEQRLLE----WVQQYPADSKKFGLIMDPR-LEKEYSIN 334
ER R T+ R L+ + Q+YP + ++ P +E+ +IN
Sbjct: 232 ERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAIN 276
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 26 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 83 NVVNLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 28/231 (12%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 10 RLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMK 61
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAF-PPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + + I+
Sbjct: 62 VLNHPNIVKL--FEVIETEKTLY--LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS 117
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + G+
Sbjct: 118 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDTFCGS 168
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLL 306
YAAP+ + + DVWS GV+LY +++G + +N + +R+L
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 25 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 130 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 27 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 79
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 132 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYXQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + VAIK + ++G +++ E + +
Sbjct: 9 DLTFLKELGTGQFGVV-----KYGKWRGQYD---VAIKMI-KEGSMSEDEFIEEAKVMMN 59
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 60 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 112
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 113 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSK 166
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--NRDGLQGHKQWVAE 133
Q+ + + +GEG +G V K K +VAIKK + D K + E
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNK-------DTGRIVAIKKFLESDDDKMVKKIAMRE 74
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPP-LPWKTRL 192
++ L L H NLV L+ C ++ + LV+EF+ + L+D FP L ++
Sbjct: 75 IKLLKQLRHENLVNLLEVC----KKKKRWYLVFEFVDHTILDDL---ELFPNGLDYQVVQ 127
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ G+ + H +I+RD K N+L+ ++ KL DFG AR G +
Sbjct: 128 KYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE 184
Query: 253 AVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTG 290
V T Y AP+ + K+ DVW+ G ++ EM G
Sbjct: 185 --VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + + K+ ++G +++ E + +
Sbjct: 5 DLTFLKELGTGQFGVV-----KYGKWRGQYDVAI----KMIKEGSMSEDEFIEEAKVMMN 55
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 56 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 108
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 109 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSK 162
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 35 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 92 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 149 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 33 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 85
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 137
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-EGPMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 138 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 25 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-EGPMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 130 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQ 135
+DF + IG+G FG V + K +E A+K L + + + K ++E
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHK-------AEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 136 -FLGVLEHPNLVKL-IGYCAVDGERGIQRLLVYEFMLNRSLEDHL-FNRAFPPLPWKTRL 192
L ++HP LV L + D + V +++ L HL R F L + R
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTAD-----KLYFVLDYINGGELFYHLQRERCF--LEPRARF 143
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
+ A L YLH + ++YRD K N+LLD L+DFGL +E + H ++
Sbjct: 144 YAA-EIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN--IEHNSTTS 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y AP+ + D W G VLYEML G
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 26 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 83 NVVNLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 140 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 41/304 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDG-LQGHKQWVAEVQFLGVL-EHP 143
+G G FG V +++ A G S+A + VA+K L L + ++E++ L L H
Sbjct: 47 LGAGAFGKVVEAT---AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 144 NLVKLIGYCAVDGER-GIQRLLVYEFMLN---RSLEDHLFNRAFPPL--------PWKTR 191
N+V L+G C + G I Y +LN R + + ++ P + +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
L A+G+A+L I+RD A N+LL K+ DFGLAR+ + V
Sbjct: 164 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
+ AP+ I T +SDVWS+G+ L+E+ + S
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM------------- 267
Query: 312 YPADSKKFGLIMDP--RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL-KQIV 368
P DSK + +I + L E++ E I + C RP Q+V+ + KQI
Sbjct: 268 -PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQIS 323
Query: 369 QVSN 372
+ +N
Sbjct: 324 ESTN 327
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 37 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 94 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 151 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+ +
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + G+
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE---FTFGNKLDEFCGS 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 MSTDCENLLKKF-LILNP 252
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 90 GGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV--LEHPNLVK 147
G FG V+K+ + VA+K LQ + W +E + ++H NL++
Sbjct: 26 GRFGCVWKAQLM---------NDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQ 73
Query: 148 LIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHE 207
I ++ L+ F SL D+L + W H+ + GL+YLHE
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHE 130
Query: 208 --------GLEVQVIYRDFKASNVLLDENFRPKLSDFGLA---REGPMVGHTHVSTAVVG 256
G + + +RDFK+ NVLL + L+DFGLA G G TH VG
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH---GQVG 187
Query: 257 TFGYAAPDYIETG-----HLTAKSDVWSFGVVLYEMLT 289
T Y AP+ +E + D+++ G+VL+E+++
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 41/304 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDG-LQGHKQWVAEVQFLGVL-EHP 143
+G G FG V +++ A G S+A + VA+K L L + ++E++ L L H
Sbjct: 49 LGAGAFGKVVEAT---AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 144 NLVKLIGYCAVDGER-GIQRLLVYEFMLN---RSLEDHLFNRAFPPL--------PWKTR 191
N+V L+G C + G I Y +LN R + + ++ P + +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
L A+G+A+L I+RD A N+LL K+ DFGLAR+ + V
Sbjct: 166 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
+ AP+ I T +SDVWS+G+ L+E+ + S
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM------------- 269
Query: 312 YPADSKKFGLIMDP--RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL-KQIV 368
P DSK + +I + L E++ E I + C RP Q+V+ + KQI
Sbjct: 270 -PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQIS 325
Query: 369 QVSN 372
+ +N
Sbjct: 326 ESTN 329
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + VAIK + ++G +++ E + +
Sbjct: 10 DLTFLKELGTGQFGVV-----KYGKWRGQYD---VAIKMI-KEGSMSEDEFIEEAKVMMN 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 61 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 113
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 114 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSK 167
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 45 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 97
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 149
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 150 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 19/221 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGHKQW-V 131
M D+ + IG G +G K K S+ ++ K+L+ + + KQ V
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRK-------SDGKILVWKELDYGSMTEAEKQMLV 53
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLP 187
+EV L L+HPN+V+ Y + +V E+ L + R +
Sbjct: 54 SEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ R+ L A + V++RD K +NV LD KL DFGLAR ++ H
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNH 168
Query: 248 -THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEM 287
T + A VGT Y +P+ + KSD+WS G +LYE+
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 25 YTNLSYIGEGAYGMVC------SAYDNVNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 77
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 130 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 30 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 82
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 134
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 135 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 31 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 83
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 135
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 136 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 22 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 74
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 126
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 127 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 23 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 75
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 127
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 128 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 23 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 75
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 127
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 128 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 39/291 (13%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQF- 136
ND + ++G G G V+K + V+A+K++ R G + +K+ + ++
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFR-------KTGHVIAVKQMRRSGNKEENKRILMDLDVV 77
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L + P +V+ G + + + E M + + L R P+P + + +
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDV----FIAMELM--GTCAEKLKKRMQGPIPERILGKMTV 131
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVG 256
+ L YL E + VI+RD K SN+LLDE + KL DFG++ G +V G
Sbjct: 132 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS--GRLV-DDKAKDRSAG 186
Query: 257 TFGYAAPDYIETGHLT-----AKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
Y AP+ I+ T ++DVWS G+ L E+ TG+ + + E L + +Q+
Sbjct: 187 CAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV-LTKVLQE 245
Query: 312 YPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
P P L + +CL+K + RPK ++++E
Sbjct: 246 EP-----------PLLPGHMGF--SGDFQSFVKDCLTKDHRKRPKYNKLLE 283
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 76 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 128
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V G + +V EF+ +L D + + TR++ +
Sbjct: 129 QHENVVEMYNSYLV----GDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAV 175
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 176 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 230
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
KIGEG +G VYK A + E + +L ++ + E+ L L+H N+
Sbjct: 9 KIGEGTYGVVYK------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL Y + ++ + +LV+E L++ L+ L + L T +L G+AY
Sbjct: 63 VKL--YDVIHTKKRL--VLVFEH-LDQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTAVVGTFGYAAP 263
H+ +V++RD K N+L++ K++DFGLAR P+ +TH V T Y AP
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLWYRAP 169
Query: 264 DYIE-TGHLTAKSDVWSFGVVLYEMLTG 290
D + + + D+WS G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 33/289 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPNL 145
+GEG FG VY+ G+ + VA+K +D L +++++E + L+HP++
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKIN----VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKLIG + I L Y + H R L T + L + +AYL
Sbjct: 72 VKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
+ ++RD N+L+ KL DFGL+R + S + + +P+
Sbjct: 126 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPES 181
Query: 266 IETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
I T SDVW F V ++E+L+ G++ K +LE + P +
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-----LCP 236
Query: 325 PRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNE 373
P L Y+ L C DRP+ +++V L + Q+ +
Sbjct: 237 PVL---YT---------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 41/304 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDG-LQGHKQWVAEVQFLGVL-EHP 143
+G G FG V +++ A G S+A + VA+K L L + ++E++ L L H
Sbjct: 54 LGAGAFGKVVEAT---AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 144 NLVKLIGYCAVDGER-GIQRLLVYEFMLN---RSLEDHLFNRAFPPL--------PWKTR 191
N+V L+G C + G I Y +LN R + + ++ P + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
L A+G+A+L I+RD A N+LL K+ DFGLAR+ + V
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
+ AP+ I T +SDVWS+G+ L+E+ + S
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM------------- 274
Query: 312 YPADSKKFGLIMDP--RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL-KQIV 368
P DSK + +I + L E++ E I + C RP Q+V+ + KQI
Sbjct: 275 -PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQIS 330
Query: 369 QVSN 372
+ +N
Sbjct: 331 ESTN 334
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHP 143
+++G G FGSV + + + VAIK L + + ++ + E Q + L++P
Sbjct: 16 IELGCGNFGSVRQGVYRM-----RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
+V+LIG C + +LV E L L + +P ++ + G+
Sbjct: 71 YIVRLIGVCQAEA-----LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMK 124
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAVVGTFGYAA 262
YL E ++RD A NVLL K+SDFGL++ G + +A + A
Sbjct: 125 YLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT 289
P+ I +++SDVWS+GV ++E L+
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 72 LGRGAFGQVIEAD---AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-----------TRL 192
N+V L+G C + G +++ EF +L +L ++ +P+K T
Sbjct: 129 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 193 HII---LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
H+I A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 186 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
KIGEG +G VYK A + E + +L ++ + E+ L L+H N+
Sbjct: 9 KIGEGTYGVVYK------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL Y + ++ + +LV+E L++ L+ L + L T +L G+AY
Sbjct: 63 VKL--YDVIHTKKRL--VLVFEH-LDQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTAVVGTFGYAAP 263
H+ +V++RD K N+L++ K++DFGLAR P+ +TH V T Y AP
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLWYRAP 169
Query: 264 DYIE-TGHLTAKSDVWSFGVVLYEMLTG 290
D + + + D+WS G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 31 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 83
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V E + V EF+ +L D + + TR++ +
Sbjct: 84 QHENVVEMYNSYLVGDELWV----VMEFLEGGALTDIVTH---------TRMNEEQIAAV 130
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 131 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 131/304 (43%), Gaps = 41/304 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDG-LQGHKQWVAEVQFLGVL-EHP 143
+G G FG V +++ A G S+A + VA+K L L + ++E++ L L H
Sbjct: 31 LGAGAFGKVVEAT---AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 144 NLVKLIGYCAVDGER-GIQRLLVYEFMLN---RSLEDHLFNRAFPPL--------PWKTR 191
N+V L+G C + G I Y +LN R + + ++ P + +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
L A+G+A+L I+RD A N+LL K+ DFGLAR+ + V
Sbjct: 148 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
+ AP+ I T +SDVWS+G+ L+E+ + S P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGM-------- 251
Query: 312 YPADSKKFGLIMDP--RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL-KQIV 368
P DSK + +I + L E++ E I + C RP Q+V+ + KQI
Sbjct: 252 -PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQIS 307
Query: 369 QVSN 372
+ +N
Sbjct: 308 ESTN 311
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 25/215 (11%)
Query: 80 DFSRML-KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
DF ++ ++G+G FG VYK+ K + + A K ++ + + ++ E+ L
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETS-------VLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
+HPN+VKL+ A E + L+ EF +++ + P ++++ ++
Sbjct: 90 SCDHPNIVKLLD--AFYYENNLWILI--EFCAGGAVDAVMLELERPLT--ESQIQVVCKQ 143
Query: 199 A-EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
+ L YLH+ ++I+RD KA N+L + KL+DFG++ + +GT
Sbjct: 144 TLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN--TRXIQRRDXFIGT 198
Query: 258 FGYAAPDYI--ETGH---LTAKSDVWSFGVVLYEM 287
+ AP+ + ET K+DVWS G+ L EM
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
++R KIG+G G+VY +++ A G VAI+++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVY-TAMDVATGQE------VAIRQMNLQQQPKKELIINEILVMREN 74
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
++PN+V + V G + +V E++ SL D + L A E
Sbjct: 75 KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+LH QVI+RD K+ N+LL + KL+DFG + + + +VGT +
Sbjct: 131 ---FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ--ITPEQSKRSTMVGTPYW 182
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + K D+WS G++ EM+ G
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHKQWVAEVQFLGVLEHPN 144
++G+G F SV + +K AG + A ++ KKL+ RD H++ E + +L+HPN
Sbjct: 29 ELGKGAF-SVVRRCVKVLAGQEYA-AKIINTKKLSARD----HQKLEREARICRLLKHPN 82
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+V+L + +G L+++ + L + + R + H I E + +
Sbjct: 83 IVRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLH 136
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
H+ + V++RD K N+LL + KL+DFGLA E + G GT GY
Sbjct: 137 CHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYL 191
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + D+W+ GV+LY +L G
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+ ++ KIGEG +G+V+K A T E + +L+ D + E+ L L
Sbjct: 4 YEKLEKIGEGTYGTVFK-----AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
+H N+V+L D + LV+EF ++ L+ + N P K+ L +L
Sbjct: 59 KHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL-- 111
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
+GL + H V++RD K N+L++ N KL+DFGLAR + + +A V T
Sbjct: 112 -KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY--SAEVVTL 165
Query: 259 GYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRSL 294
Y PD + L + S D+WS G + E+ R L
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 33 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 85
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V E + V EF+ +L D + + TR++ +
Sbjct: 86 QHENVVEMYNSYLVGDELWV----VMEFLEGGALTDIVTH---------TRMNEEQIAAV 132
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 133 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
++R KIG+G G+VY +++ A G VAI+++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVY-TAMDVATGQE------VAIRQMNLQQQPKKELIINEILVMREN 74
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
++PN+V + V G + +V E++ SL D + L A E
Sbjct: 75 KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+LH QVI+RD K+ N+LL + KL+DFG + + + +VGT +
Sbjct: 131 ---FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ--ITPEQSKRSXMVGTPYW 182
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + K D+WS G++ EM+ G
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 33/289 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPNL 145
+GEG FG VY+ G+ + VA+K +D L +++++E + L+HP++
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKIN----VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKLIG + I L Y + H R L T + L + +AYL
Sbjct: 88 VKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
+ ++RD N+L+ KL DFGL+R + S + + +P+
Sbjct: 142 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPES 197
Query: 266 IETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
I T SDVW F V ++E+L+ G++ K +LE + P +
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-----LCP 252
Query: 325 PRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNE 373
P L L C DRP+ +++V L + Q+ +
Sbjct: 253 PVLYT------------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 22/216 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAG-DGTSEATVVAIKKLNRDGLQG-HKQWVAEVQFL-GVLEHP 143
+G G FG V ++ A G D T+ VA+K L H+ ++E++ L + H
Sbjct: 35 LGRGAFGQVIEAD---AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK-------TRLHII- 195
N+V L+G C + G +++ EF +L +L ++ +P+K T H+I
Sbjct: 92 NVVNLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 196 --LGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 149 YSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 33/289 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDG-LQGHKQWVAEVQFLGVLEHPNL 145
+GEG FG VY+ G E VA+K +D L +++++E + L+HP++
Sbjct: 20 LGEGFFGEVYEGVYTNHKG----EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKLIG + I L Y + H R L T + L + +AYL
Sbjct: 76 VKLIGIIEEEPTWIIMELYPYGEL------GHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDY 265
+ ++RD N+L+ KL DFGL+R + S + + +P+
Sbjct: 130 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPES 185
Query: 266 IETGHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFGLIMD 324
I T SDVW F V ++E+L+ G++ K +LE + P +
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD-----LCP 240
Query: 325 PRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQIVQVSNE 373
P L Y+ L C DRP+ +++V L + Q+ +
Sbjct: 241 PVL---YT---------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH--KQWVAEVQFLG 138
RML G+G FGSV ++ +K G VA+K L D + ++++ E +
Sbjct: 27 LGRML--GKGEFGSVREAQLKQEDGSFVK----VAVKMLKADIIASSDIEEFLREAACMK 80
Query: 139 VLEHPNLVKLIGYCAVDGERG---IQRLLV--------YEFMLNRSLEDHLFNRAFPPLP 187
+HP++ KL+G +G I +++ + F+L + ++ FN LP
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN-----LP 135
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+T + ++ A G+ YL I+RD A N +L E+ ++DFGL+R+ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
A + A + + T SDVW+FGV ++E++T
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE-----DHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHKQWVAEVQF 136
T ++ ++G+G F SV + +K AG + A ++ KKL+ RD H++ E +
Sbjct: 10 TEEYQLFEELGKGAF-SVVRRCVKVLAGQEYA-AMIINTKKLSARD----HQKLEREARI 63
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+L+HPN+V+L + +G L+++ + L + + R + H I
Sbjct: 64 CRLLKHPNIVRLHDSISEEG----HHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQ 117
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHVSTA 253
E + + H+ + V++R+ K N+LL + KL+DFGLA E + G
Sbjct: 118 QILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFG 172
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ + D+W+ GV+LY +L G
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + VAIK + ++G +++ E + +
Sbjct: 25 DLTFLKELGTGQFGVV-----KYGKWRGQYD---VAIKMI-KEGSMSEDEFIEEAKVMMN 75
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 76 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 128
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 129 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSK 182
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
++R KIG+G G+VY +++ A G VAI+++N + + E+ +
Sbjct: 23 YTRFEKIGQGASGTVY-TAMDVATGQE------VAIRQMNLQQQPKKELIINEILVMREN 75
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
++PN+V + V G + +V E++ SL D + L A E
Sbjct: 76 KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+LH QVI+RD K+ N+LL + KL+DFG + + + +VGT +
Sbjct: 132 ---FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ--ITPEQSKRSXMVGTPYW 183
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + K D+WS G++ EM+ G
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + VAIK + ++G +++ E + +
Sbjct: 16 DLTFLKELGTGQFGVV-----KYGKWRGQYD---VAIKMI-KEGSMSEDEFIEEAKVMMN 66
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 67 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 119
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 120 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSVGSK 173
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 66 LRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DG 123
L+ S+ +++ + IG G +G V S+ + G VAIKK+ D
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYG-VVSSARRRLTGQQ------VAIKKIPNAFDV 93
Query: 124 LQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERG-IQRLLVYEFMLNRSLEDHLFNRA 182
+ K+ + E++ L +H N++ + G + + V ++ L H +
Sbjct: 94 VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDL--HQIIHS 151
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-- 240
PL + + + GL Y+H QVI+RD K SN+L++EN K+ DFG+AR
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 241 -EGPMVGHTHVSTAVVGTFGYAAPDYIETGH-LTAKSDVWSFGVVLYEMLTGRR 292
P H + T V T Y AP+ + + H T D+WS G + EML R+
Sbjct: 209 CTSP-AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
++R KIG+G G+VY +++ A G VAI+++N + + E+ +
Sbjct: 22 YTRFEKIGQGASGTVY-TAMDVATGQE------VAIRQMNLQQQPKKELIINEILVMREN 74
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
++PN+V + V G + +V E++ SL D + L A E
Sbjct: 75 KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+LH QVI+RD K+ N+LL + KL+DFG + + + +VGT +
Sbjct: 131 ---FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ--ITPEQSKRSEMVGTPYW 182
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + K D+WS G++ EM+ G
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 41/304 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATV-VAIKKLNRDG-LQGHKQWVAEVQFLGVL-EHP 143
+G G FG V +++ A G S+A + VA+K L L + ++E++ L L H
Sbjct: 54 LGAGAFGKVVEAT---AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 144 NLVKLIGYCAVDGER-GIQRLLVYEFMLN---RSLEDHLFNRAFPPL--------PWKTR 191
N+V L+G C + G I Y +LN R + + ++ P + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
L A+G+A+L I+RD A N+LL K+ DFGLAR + V
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQ 311
+ AP+ I T +SDVWS+G+ L+E+ + S
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM------------- 274
Query: 312 YPADSKKFGLIMDP--RLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL-KQIV 368
P DSK + +I + L E++ E I + C RP Q+V+ + KQI
Sbjct: 275 -PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQIS 330
Query: 369 QVSN 372
+ +N
Sbjct: 331 ESTN 334
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 21/230 (9%)
Query: 65 NLRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDG 123
NL + + T+D+ ++G+G F SV + +K + A ++ KKL+ RD
Sbjct: 17 NLYFQXMATCTRFTDDYQLFEELGKGAF-SVVRRCVKKTPTQEYA-AKIINTKKLSARD- 73
Query: 124 LQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAF 183
H++ E + +L+HPN+V+L + +G LV++ + L + + R +
Sbjct: 74 ---HQKLEREARICRLLKHPNIVRLHDSISEEGFH----YLVFDLVTGGELFEDIVAREY 126
Query: 184 PPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAR 240
H I E + ++H+ +++RD K N+LL + KL+DFGLA
Sbjct: 127 --YSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Query: 241 EGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
E + G GT GY +P+ + D+W+ GV+LY +L G
Sbjct: 182 E--VQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 22 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 74
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V E + V EF+ +L D + + TR++ +
Sbjct: 75 QHENVVEMYNSYLVGDELWV----VMEFLEGGALTDIVTH---------TRMNEEQIAAV 121
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 122 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 176
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
KIGEG +G VYK A + E + +L ++ + E+ L L+H N+
Sbjct: 9 KIGEGTYGVVYK------AQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
VKL Y + ++ + +LV+E L++ L+ L + L T +L G+AY
Sbjct: 63 VKL--YDVIHTKKRL--VLVFEH-LDQDLKK-LLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 206 HEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG--PMVGHTHVSTAVVGTFGYAAP 263
H+ +V++RD K N+L++ K++DFGLAR P+ +TH + T Y AP
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWYRAP 169
Query: 264 DYIE-TGHLTAKSDVWSFGVVLYEMLTG 290
D + + + D+WS G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 66 LRVFSYSEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DG 123
L+ S+ +++ + IG G +G V S+ + G VAIKK+ D
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYG-VVSSARRRLTGQQ------VAIKKIPNAFDV 94
Query: 124 LQGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERG-IQRLLVYEFMLNRSLEDHLFNRA 182
+ K+ + E++ L +H N++ + G + + V ++ L H +
Sbjct: 95 VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDL--HQIIHS 152
Query: 183 FPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-- 240
PL + + + GL Y+H QVI+RD K SN+L++EN K+ DFG+AR
Sbjct: 153 SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 241 -EGPMVGHTHVSTAVVGTFGYAAPDYIETGH-LTAKSDVWSFGVVLYEMLTGRR 292
P H + T V T Y AP+ + + H T D+WS G + EML R+
Sbjct: 210 CTSP-AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 83 RMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLG 138
R+LK IG+G F V K A T + V I +LN LQ + EV+
Sbjct: 17 RLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXK 68
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILG 197
VL HPN+VKL + ++ E+ + LV E+ + D+L + + I+
Sbjct: 69 VLNHPNIVKL--FEVIETEKTL--YLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A + Y H+ +++RD KA N+LLD + K++DFG + E + A G
Sbjct: 125 AVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNE---FTFGNKLDAFCGA 175
Query: 258 FGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP-- 313
YAAP+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 235
Query: 314 --ADS----KKFGLIMDP 325
D KKF LI++P
Sbjct: 236 XSTDCENLLKKF-LILNP 252
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AI+K++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIRKISPFEHQTYCQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT T
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHP 143
+G GGFG V+ +K A G + + + R G QG K+ +A+V H
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFN--RAFPPLPWKTRLHIILGAAEG 201
+ + Y E LV M + H++N P + G
Sbjct: 245 RFIVSLAYAF---ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
L +LH+ +IYRD K NVLLD++ ++SD GLA E G T + GT G+
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKAGQTK-TKGYAGTPGFM 356
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE-----QRLLEWVQQYP 313
AP+ + D ++ GV LYEM+ R K E QR+LE YP
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + VAIK + ++G +++ E + +
Sbjct: 25 DLTFLKELGTGQFGVV-----KYGKWRGQYD---VAIKMI-KEGSMSEDEFIEEAKVMMN 75
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 76 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 128
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++V
Sbjct: 129 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEETSSVGSK 182
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHP 143
+G GGFG V+ +K A G + + + R G QG K+ +A+V H
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFN--RAFPPLPWKTRLHIILGAAEG 201
+ + Y E LV M + H++N P + G
Sbjct: 245 RFIVSLAYAF---ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
L +LH+ +IYRD K NVLLD++ ++SD GLA E G T + GT G+
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKAGQTK-TKGYAGTPGFM 356
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE-----QRLLEWVQQYP 313
AP+ + D ++ GV LYEM+ R K E QR+LE YP
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+KIGEG G V ++++ S +VA+KK++ Q + EV +
Sbjct: 26 LDNFIKIGEGSTGIVCIATVR-------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY 78
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
+H N+V++ V E + V EF+ +L D + + TR++ +
Sbjct: 79 QHENVVEMYNSYLVGDELWV----VMEFLEGGALTDIVTH---------TRMNEEQIAAV 125
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
L + L+ LH VI+RD K+ ++LL + R KLSDFG + + +
Sbjct: 126 CLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXL 180
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHP 143
+G GGFG V+ +K A G + + + R G QG K+ +A+V H
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFN--RAFPPLPWKTRLHIILGAAEG 201
+ + Y E LV M + H++N P + G
Sbjct: 245 RFIVSLAYAF---ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
L +LH+ +IYRD K NVLLD++ ++SD GLA E G T + GT G+
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKAGQTK-TKGYAGTPGFM 356
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE-----QRLLEWVQQYP 313
AP+ + D ++ GV LYEM+ R K E QR+LE YP
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLHE +IYRD K NVLLD KL+D+G+ +EG G T ++ GT Y
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + D W+ GV+++EM+ GR +
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 44/237 (18%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF + +G+G FG V K+ ++ AIKK+ R + ++EV L
Sbjct: 6 SDFEEIAVLGQGAFGQVVKAR-------NALDSRYYAIKKI-RHTEEKLSTILSEVMLLA 57
Query: 139 VLEHPNLVKLIGYCAVDGERGIQR-----------LLVYEFMLNRSLEDHLFNRAFPPLP 187
L H +V+ Y A R + + E+ NR+L D + +
Sbjct: 58 SLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 188 ---WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--- 241
W+ I+ E L+Y+H +I+RD K N+ +DE+ K+ DFGLA+
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 242 ---------GPMVGHTHVSTAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYEML 288
+ G + T+ +GT Y A + ++ TGH K D++S G++ +EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG---HKQWVAEVQFLGVLEHP 143
+G GGFG V+ +K A G + + + R G QG K+ +A+V H
Sbjct: 193 LGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFN--RAFPPLPWKTRLHIILGAAEG 201
+ + Y E LV M + H++N P + G
Sbjct: 245 RFIVSLAYAF---ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
L +LH+ +IYRD K NVLLD++ ++SD GLA E G T + GT G+
Sbjct: 302 LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVE-LKAGQTK-TKGYAGTPGFM 356
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTE-----QRLLEWVQQYP 313
AP+ + D ++ GV LYEM+ R K E QR+LE YP
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLHE +IYRD K NVLLD KL+D+G+ +EG G T ++ GT Y
Sbjct: 133 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 187
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + D W+ GV+++EM+ GR +
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L +LH+ + +IYRD K N+LLD N L+DFGL++E + T + GT Y
Sbjct: 171 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCGTIEY 226
Query: 261 AAPDYI---ETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQ-----RLLEWVQQY 312
APD + ++GH A D WS GV++YE+LTG + K Q R+L+ Y
Sbjct: 227 MAPDIVRGGDSGHDKA-VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 285
Query: 313 P 313
P
Sbjct: 286 P 286
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 44/307 (14%)
Query: 90 GGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV--LEHPNLVK 147
G FG V+K+ + +E V I + Q + W E + + ++H N+++
Sbjct: 35 GRFGCVWKAQL-------LNEYVAVKIFPI-----QDKQSWQNEYEVYSLPGMKHENILQ 82
Query: 148 LIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHE 207
IG + L+ F SL D L + W HI A GLAYLHE
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHE 139
Query: 208 -------GLEVQVIYRDFKASNVLLDENFRPKLSDFGLA---REGPMVGHTHVSTAVVGT 257
G + + +RD K+ NVLL N ++DFGLA G G TH VGT
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH---GQVGT 196
Query: 258 FGYAAPDYIETG-----HLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL--EWVQ 310
Y AP+ +E + D+++ G+VL+E+ + R + P E L E +
Sbjct: 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLPFEEEIG 254
Query: 311 QYPADSKKFGLIMDPR---LEKEYSINEA--RKIGRLADNCLSKSSKDRPKMSQVVERLK 365
Q+P+ +++ + + ++Y A + + C ++ R V ER+
Sbjct: 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314
Query: 366 QIVQVSN 372
Q+ +++N
Sbjct: 315 QMQRLTN 321
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 90
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 91 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 139
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 194
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 195 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 90
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 91 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 139
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 140 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 194
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 195 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLHE +IYRD K NVLLD KL+D+G+ +EG G T ++ GT Y
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + D W+ GV+++EM+ GR +
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 174
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG V K E V I K + + EVQ L L+HPN++
Sbjct: 34 LGKGSFGEVILCKDKITG----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGLAYL 205
KL + G LV E L D + +R F + II G+ Y+
Sbjct: 90 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYM 142
Query: 206 HEGLEVQVIYRDFKASNVLL-----DENFRPKLSDFGLAREGPMVGHTHVSTAV---VGT 257
H+ ++++RD K N+LL D N R + DFGL+ H S + +GT
Sbjct: 143 HKN---KIVHRDLKPENLLLESKSKDANIR--IIDFGLST------HFEASKKMKDKIGT 191
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 19/221 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGHKQW-V 131
M D+ + IG G +G K K S+ ++ K+L+ + + KQ V
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRK-------SDGKILVWKELDYGSMTEAEKQMLV 53
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLP 187
+EV L L+HPN+V+ Y + +V E+ L + R +
Sbjct: 54 SEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ R+ L A + V++RD K +NV LD KL DFGLAR ++ H
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNH 168
Query: 248 -THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEM 287
T + VGT Y +P+ + KSD+WS G +LYE+
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLHE +IYRD K NVLLD KL+D+G+ +EG G T ++ GT Y
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + D W+ GV+++EM+ GR +
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 74
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 75 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 123
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV-- 178
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 179 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 88
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 89 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 137
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 138 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 192
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 193 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 72 SEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV 131
S R D + + +G+G +G V++ G+ + VA+K + + K W
Sbjct: 1 SMQRTVARDITLLECVGKGRYGEVWR---------GSWQGENVAVKIFSS---RDEKSWF 48
Query: 132 AEVQFLG--VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
E + +L H N++ I Q L+ + SL D+L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTV 105
Query: 190 TRLHIILGAAEGLAYLH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+ L I+L A GLA+LH E Q + +RD K+ N+L+ +N + ++D GLA
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA----- 160
Query: 245 VGHTHVSTAV-------VGTFGYAAPDYI-ETGHLTA-----KSDVWSFGVVLYEM 287
V H+ + + VGT Y AP+ + ET + + D+W+FG+VL+E+
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 80
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 81 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 129
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 130 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 184
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 185 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FG VYK+ K + A K + + + ++ E++ L +HP +
Sbjct: 26 ELGDGAFGKVYKAKNKETGA-------LAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIIL-GAAEGL 202
VKL+G DG+ I + EF +++ + +R + ++ ++ E L
Sbjct: 79 VKLLGAYYHDGKLWI----MIEFCPGGAVDAIMLELDRGLT----EPQIQVVCRQMLEAL 130
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
+LH ++I+RD KA NVL+ +L+DFG++ + + + +GT + A
Sbjct: 131 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMA 185
Query: 263 PDYI--ETGHLTA---KSDVWSFGVVLYEM 287
P+ + ET T K+D+WS G+ L EM
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 176
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG V K E V I K + + EVQ L L+HPN++
Sbjct: 40 LGKGSFGEVILCKDKITG----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGLAYL 205
KL + G LV E L D + +R F + II G+ Y+
Sbjct: 96 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYM 148
Query: 206 HEGLEVQVIYRDFKASNVLL-----DENFRPKLSDFGLAREGPMVGHTHVSTAV---VGT 257
H+ ++++RD K N+LL D N R + DFGL+ H S + +GT
Sbjct: 149 HKN---KIVHRDLKPENLLLESKSKDANIR--IIDFGLST------HFEASKKMKDKIGT 197
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 198 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 71 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 119
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 120 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 174
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 175 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG V K E V I K + + EVQ L L+HPN++
Sbjct: 58 LGKGSFGEVILCKDKITG----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGLAYL 205
KL + G LV E L D + +R F + II G+ Y+
Sbjct: 114 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYM 166
Query: 206 HEGLEVQVIYRDFKASNVLL-----DENFRPKLSDFGLAREGPMVGHTHVSTAV---VGT 257
H+ ++++RD K N+LL D N R + DFGL+ H S + +GT
Sbjct: 167 HKN---KIVHRDLKPENLLLESKSKDANIR--IIDFGLST------HFEASKKMKDKIGT 215
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 216 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 68
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 69 VRMIGICEAE-----SWMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 117
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 118 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 172
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 173 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG V K E V I K + + EVQ L L+HPN++
Sbjct: 57 LGKGSFGEVILCKDKITG----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGLAYL 205
KL + G LV E L D + +R F + II G+ Y+
Sbjct: 113 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYM 165
Query: 206 HEGLEVQVIYRDFKASNVLL-----DENFRPKLSDFGLAREGPMVGHTHVSTAV---VGT 257
H+ ++++RD K N+LL D N R + DFGL+ H S + +GT
Sbjct: 166 HKN---KIVHRDLKPENLLLESKSKDANIR--IIDFGLST------HFEASKKMKDKIGT 214
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 215 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + IG G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 29 YQNLSPIGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 82 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 183 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
++R KIG+G G+VY +++ A G VAI+++N + + E+ +
Sbjct: 23 YTRFEKIGQGASGTVY-TAMDVATGQE------VAIRQMNLQQQPKKELIINEILVMREN 75
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
++PN+V + V G + +V E++ SL D + L A E
Sbjct: 76 KNPNIVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
+LH QVI+R+ K+ N+LL + KL+DFG + + + +VGT +
Sbjct: 132 ---FLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQ--ITPEQSKRSTMVGTPYW 183
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + K D+WS G++ EM+ G
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH V+YRD K N++LD++ K++DFGL +EG G T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEY 171
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ +E D W GVV+YEM+ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 29 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 81
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ-WVAEVQFLGV 139
++ + IGEG +G V +A D ++ V AIKK++ Q + Q + E++ L
Sbjct: 30 YTNLSYIGEGAYGMVC------SAYDNLNKVRV-AIKKISPFEHQTYCQRTLREIKILLR 82
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSL-----EDHLFNRAFPPLPWKTRLHI 194
H N++ + ++ + + + ++ L HL N +
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--------CYF 134
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREG-PMVGHTHVSTA 253
+ GL Y+H V++RD K SN+LL+ K+ DFGLAR P HT
Sbjct: 135 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 254 VVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGR 291
V T Y AP+ + KS D+WS G +L EML+ R
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 74
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 75 VRMIGICEAES-----WMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 123
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 124 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 178
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 179 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK---QWVAEVQFLGVLEHP 143
+G G FG V G+ VA+K LNR ++ + E+Q L + HP
Sbjct: 19 LGVGTFGKV-------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGL 202
+++KL + + +V E++ L D++ + + IL A +
Sbjct: 72 HIIKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD-- 125
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
Y H + V++RD K NVLLD + K++DFGL+ M+ G+ YAA
Sbjct: 126 -YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSN---MMSDGEFLRTSCGSPNYAA 178
Query: 263 PDYIETGHLTA--KSDVWSFGVVLYEMLTG 290
P+ I +G L A + D+WS GV+LY +L G
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 34 YQNLAPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 86
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 87 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 130
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 131 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 188 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G+G FG VYK+ K + A K + + + ++ E++ L +HP +
Sbjct: 18 ELGDGAFGKVYKAKNKETGA-------LAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIIL-GAAEGL 202
VKL+G DG+ I + EF +++ + +R + ++ ++ E L
Sbjct: 71 VKLLGAYYHDGKLWI----MIEFCPGGAVDAIMLELDRGLT----EPQIQVVCRQMLEAL 122
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
+LH ++I+RD KA NVL+ +L+DFG++ + + + +GT + A
Sbjct: 123 NFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPYWMA 177
Query: 263 PDYI--ETGHLTA---KSDVWSFGVVLYEM 287
P+ + ET T K+D+WS G+ L EM
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-KQWVAEVQFLGVLEHP 143
+++G G FGSV + + + VAIK L + + ++ + E Q + L++P
Sbjct: 342 IELGCGNFGSVRQGVYR-----MRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
+V+LIG C + +LV E L L + +P ++ + G+
Sbjct: 397 YIVRLIGVCQAEA-----LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMK 450
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE-GPMVGHTHVSTAVVGTFGYAA 262
YL E ++R+ A NVLL K+SDFGL++ G + +A + A
Sbjct: 451 YLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEMLT 289
P+ I +++SDVWS+GV ++E L+
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 432
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 433 VRMIGICEAE-----SWMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 481
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 482 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 536
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 537 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG+V K + T ++ + N L+ + +AE + L++P +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK-NEANDPALK--DELLAEANVMQQLDNPYI 433
Query: 146 VKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V++IG C + +LV E LN+ L+ NR K + ++ + G
Sbjct: 434 VRMIGICEAE-----SWMLVMEMAELGPLNKYLQQ---NRHVKD---KNIIELVHQVSMG 482
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR-----EGPMVGHTHVSTAVVG 256
+ YL E ++RD A NVLL K+SDFGL++ E TH V
Sbjct: 483 MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV-- 537
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I ++KSDVWSFGV+++E +
Sbjct: 538 --KWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAI---KKLNRDGLQGHKQWVAEVQFLGVLEHP 143
IG+G F V K A T V I +LN LQ + EV+ + +L HP
Sbjct: 23 IGKGNFAKV-----KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHP 74
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGL 202
N+VKL + ++ E+ + LV E+ + D+L + + I+ A +
Sbjct: 75 NIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 128
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
Y H+ +++RD KA N+LLD + K++DFG + E VG+ G+ YAA
Sbjct: 129 -YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF-TVGNK--LDTFCGSPPYAA 181
Query: 263 PDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLE-RNRPKTEQRLLEWVQQYP 313
P+ + + DVWS GV+LY +++G + +N + +R+L + P
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 31 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 84 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 245 VGHT-HVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 29 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 82 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 183 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 23 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 76 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 119
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 177 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 31 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 84 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 184
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 185 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+ ++ KIGEG +G+V+K A T E + +L+ D + E+ L L
Sbjct: 4 YEKLEKIGEGTYGTVFK-----AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL 58
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGA 198
+H N+V+L D + LV+EF ++ L+ + N P K+ L +L
Sbjct: 59 KHKNIVRLHDVLHSDK----KLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL-- 111
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTF 258
+GL + H V++RD K N+L++ N KL++FGLAR + + +A V T
Sbjct: 112 -KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTL 165
Query: 259 GYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRSL 294
Y PD + L + S D+WS G + E+ R L
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 31 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 84 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 245 VGHT-HVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 26 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 79 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 180 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 26 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 79 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 36 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 89 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 36 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 89 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 29 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 82 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 183 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 30 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 83 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 184 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 35 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 88 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 184
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 185 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G F SV + I G + V K + GL + E +L+HP++V
Sbjct: 32 IGKGAF-SVVRRCINRETGQQFAVKIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIV 89
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL--HIILGAAEGLAY 204
+L+ + DG +V+EFM L + RA + + H + E L Y
Sbjct: 90 ELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 205 LHEGLEVQVIYRDFKASNVLL--DENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
H+ +I+RD K NVLL EN P KL DFG+A + G V+ VGT +
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--VAGGRVGTPHFM 200
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ ++ DVW GV+L+ +L+G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
D + + ++G G FG V K G + + K+ ++G +++ E + +
Sbjct: 10 DLTFLKELGTGQFGVV-----KYGKWRGQYDVAI----KMIKEGSMSEDEFIEEAKVMMN 60
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILG 197
L H LV+L G C +R I ++ E+M N L ++L F + L +
Sbjct: 61 LSHEKLVQLYGVCT--KQRPI--FIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKD 113
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
E + YL Q ++RD A N L+++ K+SDFGL+R V +++
Sbjct: 114 VCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR---YVLDDEYTSSRGSK 167
Query: 258 FG--YAAPDYIETGHLTAKSDVWSFGVVLYEMLT-GRRSLER 296
F ++ P+ + ++KSD+W+FGV+++E+ + G+ ER
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 30 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 83 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 179
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL--NRDGLQGHKQWVAEVQFLG 138
+ ++ KIGEG +G V+K +VAIKK + D K + E++ L
Sbjct: 5 YEKIGKIGEGSYGVVFKCR-------NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLK 57
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILG 197
L+HPNLV L+ + R +RL LV+E+ + L H +R +P I
Sbjct: 58 QLKHPNLVNLL-----EVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQ 110
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
+ + + H+ I+RD K N+L+ ++ KL DFG AR + G + V T
Sbjct: 111 TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARL--LTGPSDYYDDEVAT 165
Query: 258 FGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTG 290
Y +P+ + DVW+ G V E+L+G
Sbjct: 166 RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IGEG FG V++ I + + + K D ++ ++++ E + +HP++V
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
KLIG V E + ++ E L L R F L + + + LAYL
Sbjct: 75 KLIG---VITENPV--WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLE 128
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG-----YA 261
+ ++RD A NVL+ N KL DFGL+R + ST + G +
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTXXKASKGKLPIKWM 179
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEML 288
AP+ I T+ SDVW FGV ++E+L
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHK---QWVAEVQFLGVLEHP 143
+G G FG V G+ VA+K LNR ++ + E+Q L + HP
Sbjct: 19 LGVGTFGKV-------KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 144 NLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGL 202
+++KL + + +V E++ L D++ + + IL A +
Sbjct: 72 HIIKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD-- 125
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
Y H + V++RD K NVLLD + K++DFGL+ M+ G+ YAA
Sbjct: 126 -YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSN---MMSDGEFLRDSCGSPNYAA 178
Query: 263 PDYIETGHLTA--KSDVWSFGVVLYEMLTG 290
P+ I +G L A + D+WS GV+LY +L G
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 35 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 88 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR---- 184
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 185 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 26 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 79 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 176 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 450
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R F L + + + L
Sbjct: 451 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTAL 504
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 505 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 560
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 47 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 100 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 196
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 197 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 29 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 82 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 183 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 43 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 96 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 193 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 31 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 84 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 127
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 180
Query: 245 VGHT-HVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 181 --HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 39/288 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G +G VY AG S +AIK++ + + E+ L+H N+V
Sbjct: 30 LGKGTYGIVY-------AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP--WKTRLHIILGAAEGLAY 204
+ +G + E G ++ + E + SL L + PL +T EGL Y
Sbjct: 83 QYLGSFS---ENGFIKIFM-EQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 205 LHEGLEVQVIYRDFKASNVLLDE-NFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
LH+ Q+++RD K NVL++ + K+SDFG ++ + G + GT Y AP
Sbjct: 138 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 192
Query: 264 DYIETG--HLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPKTEQRLLEWVQQYP------- 313
+ I+ G +D+WS G + EM TG+ E P+ + + +P
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMS 252
Query: 314 ADSKKFGL-IMDPRLEKEYSINEARKIGRLADNCL---SKSSKDRPKM 357
A++K F L +P +K N+ L D L SK K +PK+
Sbjct: 253 AEAKAFILKCFEPDPDKRACANDL-----LVDEFLKVSSKKKKTQPKL 295
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 21 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 74 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 175 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 44 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 97 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 194 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHKQWVAEVQF 136
T+++ IG+G F SV + +K G + A ++ KKL+ RD H++ E +
Sbjct: 3 TDEYQLYEDIGKGAF-SVVRRCVKLCTGHEYA-AKIINTKKLSARD----HQKLEREARI 56
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+L+H N+V+L + +G LV++ + L + + R + H I
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFH----YLVFDLVTGGELFEDIVAREY--YSEADASHCIQ 110
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHVSTA 253
E + + H+ + V++RD K N+LL + KL+DFGLA E + G
Sbjct: 111 QILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGDQQAWFG 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ + D+W+ GV+LY +L G
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 30 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 83 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 184 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 21 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 74 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 117
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 175 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 26/220 (11%)
Query: 80 DFSRMLK-------IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV- 131
D+ +LK IG GGF V K A T E +VAIK ++++ L +
Sbjct: 4 DYDELLKYYELHETIGTGGFAKV-----KLACHILTGE--MVAIKIMDKNTLGSDLPRIK 56
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR 191
E++ L L H ++ +L Y ++ I +V E+ L D++ ++ +TR
Sbjct: 57 TEIEALKNLRHQHICQL--YHVLETANKI--FMVLEYCPGGELFDYIISQDRLSEE-ETR 111
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ + +AY+H +RD K N+L DE + KL DFGL + H+
Sbjct: 112 V-VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167
Query: 252 TAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYEMLTG 290
T G+ YAAP+ I+ +L +++DVWS G++LY ++ G
Sbjct: 168 TC-CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 20 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 73 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 87 IGE-GGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
IGE G FG VYK+ K + + A K ++ + + ++ E+ L +HPN+
Sbjct: 17 IGELGDFGKVYKAQNK-------ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA-EGLAY 204
VKL+ A E + L+ EF +++ + P ++++ ++ + L Y
Sbjct: 70 VKLLD--AFYYENNLWILI--EFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNY 123
Query: 205 LHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPD 264
LH+ ++I+RD KA N+L + KL+DFG++ + + +GT + AP+
Sbjct: 124 LHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTX-IQRRDSFIGTPYWMAPE 179
Query: 265 YI--ETGH---LTAKSDVWSFGVVLYEM 287
+ ET K+DVWS G+ L EM
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 26 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 79 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 180 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 75 RQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH---KQWV 131
R + + K+G+G +G V+KS I G+ VVA+KK+ D Q ++
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKS-IDRRTGE------VVAVKKI-FDAFQNSTDAQRTF 56
Query: 132 AEVQFLGVLE-HPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT 190
E+ L L H N+V L+ D +R + LV+++M + H RA P
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDV--YLVFDYM---ETDLHAVIRANILEPVHK 111
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR---------- 240
+ +++ + + YLH G +++RD K SN+LL+ K++DFGL+R
Sbjct: 112 Q-YVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167
Query: 241 EGPMVGHTH---------VSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTG 290
P+ + + + T V T Y AP+ + + T D+WS G +L E+L G
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 291 R 291
+
Sbjct: 228 K 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 44 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 97 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 194 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 20 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 73 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCA 116
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 245 VGHTHVSTA-VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT A V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 43 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 96 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 193 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQF 136
+DF + +G+G FG+VY + K V+ +L ++G++ Q E++
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREK--QNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 67
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-LFNRAFPPLPWKTR 191
L HPN++++ Y D +R L+ EF L + L+ H F+ +
Sbjct: 68 QSHLRHPNILRMYNYFH-DRKRIY---LMLEFAPRGELYKELQKHGRFDE-------QRS 116
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ A+ L Y HE +VI+RD K N+L+ K++DFG + P +
Sbjct: 117 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----R 169
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ GT Y P+ IE K D+W GV+ YE L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 30 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 83 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR---- 179
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 47 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 100 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 201 EMXGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 245 VGHTHVSTA-VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT A V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 22 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 75 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 118
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 175
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 176 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 20 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 73 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ D+GLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGL R +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGHKQW-V 131
M D+ + IG G +G K K S+ ++ K+L+ + + KQ V
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRK-------SDGKILVWKELDYGSMTEAEKQMLV 53
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDHLFNRAFPPLP 187
+EV L L+HPN+V+ Y + +V E+ L + R +
Sbjct: 54 SEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+ R+ L A + V++RD K +NV LD KL DFGLAR ++ H
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---ILNH 168
Query: 248 TH-VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEM 287
+ VGT Y +P+ + KSD+WS G +LYE+
Sbjct: 169 DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 72 SEMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV 131
S R + + + +G+G +G V++ G+ + VA+K + + K W
Sbjct: 1 SMQRTVAHQITLLECVGKGRYGEVWR---------GSWQGENVAVKIFSS---RDEKSWF 48
Query: 132 AEVQFLG--VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
E + +L H N++ I Q L+ + SL D+L L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTV 105
Query: 190 TRLHIILGAAEGLAYLH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+ L I+L A GLA+LH E Q + +RD K+ N+L+ +N + ++D GLA
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA----- 160
Query: 245 VGHTHVSTAV-------VGTFGYAAPDYI-ETGHLTA-----KSDVWSFGVVLYEM 287
V H+ + + VGT Y AP+ + ET + + D+W+FG+VL+E+
Sbjct: 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 44/226 (19%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV S +A+KKL+R + K+ E++ L
Sbjct: 53 YQTLSPVGSGAYGSVCSSY-------DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 139 VLEHPNLVKLIGYC--AVDGERGIQRLLVYEFM---LNRSL------EDHLFNRAFPPLP 187
++H N++ L+ A E LV M LN + +DH+
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV--------- 156
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR H
Sbjct: 157 ----QFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR------H 203
Query: 248 THVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
T T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFL 137
++ + R+ K+G G +G V K +E + IKK + + EV L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTG----AERAIKIIKKSSVTTTSNSGALLDEVAVL 58
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIIL 196
L+HPN++KL Y + +R LV E L D + R F + + +L
Sbjct: 59 KQLDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL 114
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP---KLSDFGLAREGPMVGHTHVSTA 253
G YLH+ +++RD K N+LL+ R K+ DFGL+ H V
Sbjct: 115 S---GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS------AHFEVGGK 162
Query: 254 V---VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ +GT Y AP+ + + K DVWS GV+LY +L G
Sbjct: 163 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL++ + K+ E++ L
Sbjct: 36 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 89 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 185
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 186 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 20 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 73 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 116
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---- 169
Query: 245 VGHTHVSTA-VVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT A V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 170 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAEVQFL 137
F + IG+G FG V + A+K +N+ + E+Q +
Sbjct: 17 FEILRAIGKGSFGKV-------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILG 197
LEHP LV L Y D E +V + +L L HL +T I
Sbjct: 70 QGLEHPFLVNL-WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICE 123
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
L YL ++I+RD K N+LLDE+ ++DF +A P T ++T + GT
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGT 177
Query: 258 FGYAAPDYIETGHLTAKS---DVWSFGVVLYEMLTGRR 292
Y AP+ + S D WS GV YE+L GRR
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 36/215 (16%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G FG V K E V I K + + EVQ L L+HPN+
Sbjct: 34 LGKGSFGEVILCKDKITG----QECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAAEGLAYL 205
KL + G LV E L D + +R F + II G+ Y
Sbjct: 90 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIRQVLSGITYX 142
Query: 206 HEGLEVQVIYRDFKASNVLL-----DENFRPKLSDFGLAREGPMVGHTHVSTAV-----V 255
H+ ++++RD K N+LL D N R + DFGL+ TH + +
Sbjct: 143 HKN---KIVHRDLKPENLLLESKSKDANIR--IIDFGLS--------THFEASKKXKDKI 189
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHKQWVAEVQF 136
T+++ ++G+G F SV + +K G + A ++ KKL+ RD H++ E +
Sbjct: 3 TDEYQLFEELGKGAF-SVVRRCMKIPTGQEYA-AKIINTKKLSARD----HQKLEREARI 56
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+L+HPN+V+L + +G LV++ + L + + R + H I
Sbjct: 57 CRLLKHPNIVRLHDSISEEG----FHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQ 110
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHVSTA 253
E + + H +++RD K N+LL + KL+DFGLA E + G
Sbjct: 111 QILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFG 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ + D+W+ GV+LY +L G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+ +KIGEG G V ++ K VA+KK++ Q + EV +
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQ-------VAVKKMDLRKQQRRELLFNEVVIMRDY 99
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH------I 194
H N+V + V E + V EF+ +L D + + TR++ +
Sbjct: 100 HHDNVVDMYSSYLVGDELWV----VMEFLEGGALTDIVTH---------TRMNEEQIATV 146
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFG----LAREGPMVGHTHV 250
L L+YLH VI+RD K+ ++LL + R KLSDFG +++E P
Sbjct: 147 CLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK------ 197
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+VGT + AP+ I + D+WS G+++ EM+ G
Sbjct: 198 RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 77 ATNDFSRMLK---IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
A N F + K +G G FG V+K + T+ +A K + G++ ++ E
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKC-------EETATGLKLAAKIIKTRGMKDKEEVKNE 136
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+ + L+H NL++L Y A + + I +LV E++ L D + + ++ T L
Sbjct: 137 ISVMNQLDHANLIQL--YDAFESKNDI--VLVMEYVDGGELFDRIIDESYNLTELDTIL- 191
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLL--DENFRPKLSDFGLAREGPMVGHTHVS 251
+ EG+ ++H+ + +++ D K N+L + + K+ DFGLAR V+
Sbjct: 192 FMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT + AP+ + ++ +D+WS GV+ Y +L+G
Sbjct: 249 ---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IGEG FG V++ I + + + K D ++ ++++ E + +HP++V
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
KLIG V E + ++ E L L R + L + + + LAYL
Sbjct: 75 KLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLE 128
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYI 266
+ ++RD A NVL+ N KL DFGL+R + S + + AP+ I
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 267 ETGHLTAKSDVWSFGVVLYEML 288
T+ SDVW FGV ++E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG--VLEHPN 144
+G+G +G V++ G VA+K + + + W E + +L H N
Sbjct: 16 VGKGRYGEVWR---------GLWHGESVAVKIFSS---RDEQSWFRETEIYNTVLLRHDN 63
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I Q L+ + + SL D L + P L + + AA GLA+
Sbjct: 64 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGLAH 120
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E Q + +RDFK+ NVL+ N + ++D GLA V H+ S +
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-----VMHSQGSDYLDIGNN 175
Query: 255 --VGTFGYAAPDYIETGHLT------AKSDVWSFGVVLYEMLTGRRSL 294
VGT Y AP+ ++ T +D+W+FG+VL+E+ RR++
Sbjct: 176 PRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 73
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 74 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 127
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 128 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 183
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 67
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 68 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 121
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 122 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 177
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 72
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 73 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 126
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 127 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 182
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 70
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 71 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 124
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 125 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 180
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFL 137
++ + R+ K+G G +G V K +E + IKK + + EV L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTG----AERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR-AFPPLPWKTRLHIIL 196
L+HPN++KL Y + +R LV E L D + R F + + +L
Sbjct: 76 KQLDHPNIMKL--YEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL 131
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP---KLSDFGLAREGPMVGHTHVSTA 253
G YLH+ +++RD K N+LL+ R K+ DFGL+ H V
Sbjct: 132 S---GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS------AHFEVGGK 179
Query: 254 V---VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ +GT Y AP+ + + K DVWS GV+LY +L G
Sbjct: 180 MKERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN-RDGLQGHKQWVAEVQF 136
T+++ ++G+G F SV + +K G + A ++ KKL+ RD H++ E +
Sbjct: 3 TDEYQLFEELGKGAF-SVVRRCMKIPTGQEYA-AKIINTKKLSARD----HQKLEREARI 56
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
+L+HPN+V+L + +G LV++ + L + + R + H I
Sbjct: 57 CRLLKHPNIVRLHDSISEEG----FHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQ 110
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHVSTA 253
E + + H +++RD K N+LL + KL+DFGLA E + G
Sbjct: 111 QILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFG 165
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ + D+W+ GV+LY +L G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 44/237 (18%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
+DF + +G+G FG V K+ ++ AIKK+ R + ++EV L
Sbjct: 6 SDFEEIAVLGQGAFGQVVKAR-------NALDSRYYAIKKI-RHTEEKLSTILSEVMLLA 57
Query: 139 VLEHPNLVKLIGYCAVDGERGIQR-----------LLVYEFMLNRSLEDHLFNRAFPPLP 187
L H +V+ Y A R + + E+ N +L D + +
Sbjct: 58 SLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 188 ---WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--- 241
W+ I+ E L+Y+H +I+RD K N+ +DE+ K+ DFGLA+
Sbjct: 116 DEYWRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 242 ---------GPMVGHTHVSTAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYEML 288
+ G + T+ +GT Y A + ++ TGH K D++S G++ +EM+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 44 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 97 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DFGLAR +
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 198 EMXG-------XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 29/213 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG V+++ + E+ VAIKK+ LQ + E+Q + +++HPN+V
Sbjct: 48 IGNGSFGVVFQAKL--------VESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVV 95
Query: 147 KLIGYCAVDGERGIQRLL------VYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
L + +G++ + L V E + S + P L K ++ +L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL---R 152
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
LAY+H + + +RD K N+LLD + KL DFG A+ + G +VS + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSX--ICSRY 206
Query: 260 YAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
Y AP+ I + T D+WS G V+ E++ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 74 MRQATNDFSRMLKI----GEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
M A+ FS + G+G F SV + + G + A ++ KKL+ Q ++
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAF-SVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLER 77
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQ----RLLVYEFMLNRSLEDHLFNRAFPP 185
E + L+HPN+V+L IQ LV++ + L + + R F
Sbjct: 78 ---EARICRKLQHPNIVRL--------HDSIQEESFHYLVFDLVTGGELFEDIVAREF-- 124
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP---KLSDFGLAREG 242
H I E +AY H +++R+ K N+LL + KL+DFGLA E
Sbjct: 125 YSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE- 180
Query: 243 PMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V + GT GY +P+ ++ + D+W+ GV+LY +L G
Sbjct: 181 --VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFL 137
++++ ++G+G F SV + + G + A ++ KKL+ Q ++ E +
Sbjct: 4 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLER---EARIC 58
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQ----RLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
L+HPN+V+L IQ LV++ + L + + R F H
Sbjct: 59 RKLQHPNIVRL--------HDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASH 108
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHV 250
I E +AY H +++R+ K N+LL + KL+DFGLA E V +
Sbjct: 109 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE---VNDSEA 162
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ ++ + D+W+ GV+LY +L G
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQF 136
+DF +G+G FG+VY + K V+ +L ++G++ Q E++
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREK--QNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 67
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-LFNRAFPPLPWKTR 191
L HPN++++ Y D +R L+ EF L + L+ H F+ +
Sbjct: 68 QSHLRHPNILRMYNYFH-DRKRIY---LMLEFAPRGELYKELQKHGRFDE-------QRS 116
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ A+ L Y HE +VI+RD K N+L+ K++DFG + P +
Sbjct: 117 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----R 169
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ GT Y P+ IE K D+W GV+ YE L G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 75
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 76 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 129
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 130 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 185
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 98
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R + L + + + L
Sbjct: 99 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTAL 152
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ N KL DFGL+R + S + + A
Sbjct: 153 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 208
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQF 136
+DF +G+G FG+VY + K V+ +L ++G++ Q E++
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREK--QNKFIMALKVLFKSQLEKEGVE--HQLRREIEI 68
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFM----LNRSLEDH-LFNRAFPPLPWKTR 191
L HPN++++ Y D +R L+ EF L + L+ H F+ +
Sbjct: 69 QSHLRHPNILRMYNYFH-DRKRIY---LMLEFAPRGELYKELQKHGRFDE-------QRS 117
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ A+ L Y HE +VI+RD K N+L+ K++DFG + P +
Sbjct: 118 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----R 170
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ GT Y P+ IE K D+W GV+ YE L G
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFL 137
++++ ++G+G F SV + + G + A ++ KKL+ Q ++ E +
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLER---EARIC 59
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQ----RLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
L+HPN+V+L IQ LV++ + L + + R F H
Sbjct: 60 RKLQHPNIVRL--------HDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASH 109
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHV 250
I E +AY H +++R+ K N+LL + KL+DFGLA E V +
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE---VNDSEA 163
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ ++ + D+W+ GV+LY +L G
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG--VLEHPN 144
+G+G +G V++ G+ + VA+K + + K W E + +L H N
Sbjct: 45 VGKGRYGEVWR---------GSWQGENVAVKIFSS---RDEKSWFRETELYNTVMLRHEN 92
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I Q L+ + SL D+L L + L I+L A GLA+
Sbjct: 93 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAH 149
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E Q + +RD K+ N+L+ +N + ++D GLA V H+ + +
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-----VMHSQSTNQLDVGNN 204
Query: 255 --VGTFGYAAPDYI-ETGHLTA-----KSDVWSFGVVLYEM 287
VGT Y AP+ + ET + + D+W+FG+VL+E+
Sbjct: 205 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFL 137
++++ ++G+G F SV + + G + A ++ KKL+ Q ++ E +
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLER---EARIC 59
Query: 138 GVLEHPNLVKLIGYCAVDGERGIQ----RLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
L+HPN+V+L IQ LV++ + L + + R F H
Sbjct: 60 RKLQHPNIVRL--------HDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASH 109
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFR---PKLSDFGLAREGPMVGHTHV 250
I E +AY H +++R+ K N+LL + KL+DFGLA E V +
Sbjct: 110 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE---VNDSEA 163
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT GY +P+ ++ + D+W+ GV+LY +L G
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 164 LVYEFMLNRSL---EDHLF--NRAFPP-LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRD 217
++YE+M N S+ +++ F ++ + +P + II +Y+H E + +RD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRD 177
Query: 218 FKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYI--ETGHLTAKS 275
K SN+L+D+N R KLSDFG E + + + GT+ + P++ E+ + AK
Sbjct: 178 VKPSNILMDKNGRVKLSDFG---ESEYMVDKKIKGS-RGTYEFMPPEFFSNESSYNGAKV 233
Query: 276 DVWSFGVVLYEML 288
D+WS G+ LY M
Sbjct: 234 DIWSLGICLYVMF 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 21/206 (10%)
Query: 87 IGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEH 142
IGEG FG V Y S PA + K D ++ ++++ E + +H
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMA-----VAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 450
Query: 143 PNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
P++VKLIG V E + ++ E L L R F L + + + L
Sbjct: 451 PHIVKLIG---VITENPV--WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTAL 504
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAA 262
AYL + ++RD A NVL+ KL DFGL+R + S + + A
Sbjct: 505 AYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMA 560
Query: 263 PDYIETGHLTAKSDVWSFGVVLYEML 288
P+ I T+ SDVW FGV ++E+L
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Query: 70 SYSEMRQATNDFSRMLK----IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQ 125
S S ++ D ++ + +G G F V + + + A+K + + L+
Sbjct: 9 SSSSWKKQAEDIKKIFEFKETLGTGAFSEV-------VLAEEKATGKLFAVKCIPKKALK 61
Query: 126 GHKQWVA-EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP 184
G + + E+ L ++H N+V L E LV + + L D + + F
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIY----ESPNHLYLVMQLVSGGELFDRIVEKGF- 116
Query: 185 PLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLARE 241
K +I + + YLH + +++RD K N+L DE + +SDFGL++
Sbjct: 117 -YTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK- 171
Query: 242 GPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSL-ERNRPK 300
M G V + GT GY AP+ + + D WS GV+ Y +L G + N K
Sbjct: 172 --MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK 229
Query: 301 TEQRLLEWVQQYPADSKKFGLIMD 324
+++L+ +Y DS + I D
Sbjct: 230 LFEQILK--AEYEFDSPYWDDISD 251
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G +G VY AG S +AIK++ + + E+ L+H N+V
Sbjct: 16 LGKGTYGIVY-------AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP--WKTRLHIILGAAEGLAY 204
+ +G + E G ++ + E + SL L + PL +T EGL Y
Sbjct: 69 QYLGSFS---ENGFIKIFM-EQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 205 LHEGLEVQVIYRDFKASNVLLDE-NFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
LH+ Q+++RD K NVL++ + K+SDFG ++ + G + GT Y AP
Sbjct: 124 LHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 178
Query: 264 DYIETG--HLTAKSDVWSFGVVLYEMLTGR 291
+ I+ G +D+WS G + EM TG+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH---KQWVAEVQFLGVLEHP 143
+G G +GSV S+I +G+ VAIKKL+R Q K+ E+ L ++H
Sbjct: 32 VGSGAYGSVC-SAIDKRSGEK------VAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHE 83
Query: 144 NLVKLIG-YCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
N++ L+ + R LV FM ++ + F + +++ +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFM--QTDLQKIMGLKFSE---EKIQYLVYQMLKG 138
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVSTAVVGTFG 259
L Y+H V++RD K N+ ++E+ K+ DFGLAR + M G+ V T
Sbjct: 139 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY-------VVTRW 188
Query: 260 YAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGR 291
Y AP+ I + H D+WS G ++ EMLTG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 45/242 (18%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
+R A+ DF + +G+G FG V K+ ++ AIKK+ R + ++E
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKAR-------NALDSRYYAIKKI-RHTEEKLSTILSE 52
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQR-----------LLVYEFMLNRSLEDHLFNRA 182
V L L H +V+ Y A R + + E+ NR+L D + +
Sbjct: 53 VXLLASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN 110
Query: 183 FPPLP---WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA 239
W+ I+ E L+Y+H +I+R+ K N+ +DE+ K+ DFGLA
Sbjct: 111 LNQQRDEYWRLFRQIL----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 240 RE------------GPMVGHTHVSTAVVGTFGYAAPDYIE-TGHLTAKSDVWSFGVVLYE 286
+ + G + T+ +GT Y A + ++ TGH K D +S G++ +E
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
Query: 287 ML 288
+
Sbjct: 224 XI 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IGEG FG V++ I + + + K D ++ ++++ E + +HP++V
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIV 74
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLH 206
KLIG V E + ++ E L L R F L + + + LAYL
Sbjct: 75 KLIG---VITENPV--WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLE 128
Query: 207 EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYI 266
+ ++RD A NVL+ KL DFGL+R + S + + AP+ I
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESI 184
Query: 267 ETGHLTAKSDVWSFGVVLYEML 288
T+ SDVW FGV ++E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ FGLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR---- 173
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ D GLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH---KQWVAEVQFLGVLEHP 143
+G G +GSV S+I +G+ VAIKKL+R Q K+ E+ L ++H
Sbjct: 50 VGSGAYGSVC-SAIDKRSGEK------VAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHE 101
Query: 144 NLVKLIG-YCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
N++ L+ + R LV FM ++ + F + +++ +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFM--QTDLQKIMGMEFSE---EKIQYLVYQMLKG 156
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVSTAVVGTFG 259
L Y+H V++RD K N+ ++E+ K+ DFGLAR + M G+ V T
Sbjct: 157 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY-------VVTRW 206
Query: 260 YAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGR 291
Y AP+ I + H D+WS G ++ EMLTG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQG E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 25/220 (11%)
Query: 75 RQATNDFSRM-LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAE 133
R A +DF + ++G G VY+ K GT + + + K D K E
Sbjct: 48 RDALSDFFEVESELGRGATSIVYRCKQK-----GTQKPYALKVLKKTVD----KKIVRTE 98
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
+ L L HPN++KL E LV E + L D + + + +
Sbjct: 99 IGVLLRLSHPNIIKLKEIFETPTEIS----LVLELVTGGELFDRIVEKGY--YSERDAAD 152
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDE---NFRPKLSDFGLAREGPMVGHTHV 250
+ E +AYLHE +++RD K N+L + K++DFGL++ +V H +
Sbjct: 153 AVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVL 206
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V GT GY AP+ + + D+WS G++ Y +L G
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ DF LAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EG 242
+L +I GL Y+H +I+RD K SN+ ++E+ K+ D GLAR +
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 243 PMVGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
M G+ V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 178 EMTGY-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 24/242 (9%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH---KQWVAE 133
+DF +G+G FG+VY + K + +VA+K L + ++ Q E
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSH-------FIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLH 193
++ L HPN+++L Y D R L+ E+ L L +
Sbjct: 74 IEIQAHLHHPNILRLYNY-FYDRRRI---YLILEYAPRGELYKELQKSC--TFDEQRTAT 127
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I+ A+ L Y H +VI+RD K N+LL K++DFG + P +
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RKT 180
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLER-NRPKTEQRLLEWVQQY 312
+ GT Y P+ IE K D+W GV+ YE+L G E + +T +R+++ ++
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 313 PA 314
PA
Sbjct: 241 PA 242
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL-EHPNL 145
+G G FG V ++ + G S V + K D + + ++E++ + L H N+
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE-REALMSELKMMTQLGSHENI 111
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNR---------------------AFP 184
V L+G C + G L++E+ L ++L ++
Sbjct: 112 VNLLGACTLSG----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 185 PLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
L ++ L A+G+ +L ++RD A NVL+ K+ DFGLAR+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ V + AP+ + G T KSDVWS+G++L+E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH--KQWVAEVQFLGVLEHPN 144
+G+G FG V K + + A+K +N+ + + EV+ L L+HPN
Sbjct: 30 LGKGSFGEVLKCKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++KL E +V E L D + R II G+ Y
Sbjct: 83 IMKLFEIL----EDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITY 136
Query: 205 LHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+H+ +++RD K N+LL+ ++ K+ DFGL+ +GT Y
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYI 190
Query: 262 APDYIETGHLTAKSDVWSFGVVLYEMLTG 290
AP+ + G K DVWS GV+LY +L+G
Sbjct: 191 APEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQ-GHKQWVAEVQFLGVLEHPN 144
K+G G FG V+ + S IK +N+D Q +Q AE++ L L+HPN
Sbjct: 29 KLGSGAFGDVHLV-------EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 145 LVKLI--------GYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
++K+ Y ++ G + +L R + +A + ++
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGE-------LLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN--FRP-KLSDFGLAREGPMVGHTHVSTA 253
A LAY H V+++D K N+L + P K+ DFGLA + ST
Sbjct: 135 NA---LAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE---LFKSDEHSTN 185
Query: 254 VVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y AP+ + +T K D+WS GVV+Y +LTG
Sbjct: 186 AAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLG 138
+ + +G G +GSV A T VA+KKL+R + K+ E++ L
Sbjct: 24 YQNLSPVGSGAYGSV-------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLED--------HLFNRAFPPLPWKT 190
++H N++ L+ F RSLE+ HL +
Sbjct: 77 HMKHENVIGLLDV----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 191 RL------HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPM 244
+L +I GL Y+H +I+RD K SN+ ++E+ K+ D GLAR
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR---- 173
Query: 245 VGHTHVS-TAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
HT T V T Y AP+ + H D+WS G ++ E+LTGR
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRP--KLSDFGLAREGPMVGHTHVSTAVVGTF 258
G++Y H +Q+ +RD K N LLD + P K+ DFG ++ V H+ + VGT
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS--VLHSQ-PKSTVGTP 181
Query: 259 GYAAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLLEWVQQY 312
Y AP+ + K +DVWS GV LY ML G E R+ KT QR+L
Sbjct: 182 AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI 241
Query: 313 PAD 315
P D
Sbjct: 242 PDD 244
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQF 136
++DF +GEG +G V ++ KP +VAIKK+ D + + E++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L +H N++ + D + + + ++ L + + L + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIY 119
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--------EGPMVGHT 248
+ LH VI+RD K SN+L++ N K+ DFGLAR G
Sbjct: 120 QTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T V T Y AP+ + T +++ DVWS G +L E+ RR + R Q LL
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQF 136
++DF +GEG +G V ++ KP +VAIKK+ D + + E++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L +H N++ + D + + + ++ L + + L + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIY 119
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--------EGPMVGHT 248
+ LH VI+RD K SN+L++ N K+ DFGLAR G
Sbjct: 120 QTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T V T Y AP+ + T +++ DVWS G +L E+ RR + R Q LL
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 119 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 169
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
T + + GT Y AP+ + T D WS GV+L+ L+G +R
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 63 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 118 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 168
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T + + GT Y AP+ + T D WS GV+L+ L+G +R +
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQG E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQG E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 62 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 223
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 119 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 169
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T + + GT Y AP+ + T D WS GV+L+ L+G +R +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 64 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 119 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 169
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T + + GT Y AP+ + T D WS GV+L+ L+G +R +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 205
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 207
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 70 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 125 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 175
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
T + + GT Y AP+ + T D WS GV+L+ L+G +R
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNY 187
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNY 183
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKTLCGTPNY 183
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 74 MRQATNDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ 129
++ D+ + IG G FG V +K+S K V A+K L++ +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQK-----------VYAMKLLSKFEMIKRSD 118
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPL 186
+ E + P +V+L +CA ++ + +V E+M L + + N P
Sbjct: 119 SAFFWEERDIMAFANSPWVVQL--FCAFQDDKYL--YMVMEYMPGGDLVNLMSNYDVPE- 173
Query: 187 PWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVG 246
W AE + L + +I+RD K N+LLD++ KL+DFG + G
Sbjct: 174 KWAK-----FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
Query: 247 HTHVSTAVVGTFGYAAPDYIET----GHLTAKSDVWSFGVVLYEMLTG 290
H TA VGT Y +P+ +++ G+ + D WS GV L+EML G
Sbjct: 229 MVHCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 40 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 201
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVL 140
+ R+ K+G G +G V K T + I + + + + EV L +L
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKV-----THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL 93
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRA-FPPLPWKTRLHIILGAA 199
+HPN++KL + E LV E L D + +R F + II
Sbjct: 94 DHPNIMKLYDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVL 146
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRP---KLSDFGLAREGPMVGHTHVSTAVVG 256
G+ YLH+ +++RD K N+LL+ + K+ DFGL+ + + +G
Sbjct: 147 SGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLG 200
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQ--QYPA 314
T Y AP+ + + K DVWS GV+L+ +L G +T+Q +L V+ +Y
Sbjct: 201 TAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPF---GGQTDQEILRKVEKGKYTF 256
Query: 315 DS 316
DS
Sbjct: 257 DS 258
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G YLH +VI+RD K N+ L+E+ K+ DFGLA + G + GT Y
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNY 181
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
AP+ + + + DVWS G ++Y +L G+ E
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 47 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 155 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 208
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 62 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 223
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAE 133
NDFS IG GGFG VY + A+K L++ + QG + E
Sbjct: 186 TMNDFSVHRIIGRGGFGEVYGCR-------KADTGKMYAMKCLDKKRIKMKQGETLALNE 238
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
L ++ + ++ C +L + + M L HL +
Sbjct: 239 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----FSEA 291
Query: 193 HIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ AAE GL ++H V+YRD K +N+LLDE+ ++SD GLA +
Sbjct: 292 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KK 344
Query: 250 VSTAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
A VGT GY AP+ ++ G + +D +S G +L+++L G +++ K + +
Sbjct: 345 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 36 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 144 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 197
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAE 133
NDFS IG GGFG VY + A+K L++ + QG + E
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCR-------KADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
L ++ + ++ C +L + + M L HL +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----FSEA 292
Query: 193 HIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ AAE GL ++H V+YRD K +N+LLDE+ ++SD GLA +
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KK 345
Query: 250 VSTAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
A VGT GY AP+ ++ G + +D +S G +L+++L G +++ K + +
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRP--KLSDFGLAREGPMVGHTHVSTAVVGTF 258
G++Y H +QV +RD K N LLD + P K++DFG ++ V H+ +AV GT
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKAS--VLHSQPKSAV-GTP 180
Query: 259 GYAAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLL------ 306
Y AP+ + K +DVWS GV LY ML G E +N KT R+L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 307 -EWVQQYPADSKKFGLIMDPRLEKEYSINEARK---------IGRLADNCLSKSSKDRPK 356
++V P I K SI E R + DN ++ + +
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQ 300
Query: 357 MSQVVERLKQIV 368
Q +E + QI+
Sbjct: 301 PGQSIEEIMQII 312
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 142 HPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
HP+++ LI E LV++ M L D+L + L K I+ E
Sbjct: 159 HPHIITLID----SYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEA 212
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA-----VVG 256
+++LH +++RD K N+LLD+N + +LSDFG + H+ + G
Sbjct: 213 VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS--------CHLEPGEKLRELCG 261
Query: 257 TFGYAAPDYIETGH------LTAKSDVWSFGVVLYEMLTG 290
T GY AP+ ++ + D+W+ GV+L+ +L G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 56 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 164 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 217
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK-LNRDGLQGHK-QWVAEVQFLG 138
+ ++ KIG+G FG V+K+ + VA+KK L + +G + E++ L
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQK-------VALKKVLMENEKEGFPITALREIKILQ 72
Query: 139 VLEHPNLVKLIGYCAVDGE-----RGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKT 190
+L+H N+V LI C +G LV++F L L + L + K
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKG-SIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KR 129
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ ++L GL Y+H ++++RD KA+NVL+ + KL+DFGLAR + ++
Sbjct: 130 VMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 251 STAV--VGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
+ V T Y P+ + D+W G ++ EM T ++ N TEQ L
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLA 240
Query: 308 WVQQ 311
+ Q
Sbjct: 241 LISQ 244
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAE 133
NDFS IG GGFG VY + A+K L++ + QG + E
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCR-------KADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
L ++ + ++ C +L + + M L HL +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----FSEA 292
Query: 193 HIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ AAE GL ++H V+YRD K +N+LLDE+ ++SD GLA +
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KK 345
Query: 250 VSTAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
A VGT GY AP+ ++ G + +D +S G +L+++L G +++ K + +
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL---QGHKQWVAE 133
NDFS IG GGFG VY + A+K L++ + QG + E
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCR-------KADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 134 VQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
L ++ + ++ C +L + + M L HL +
Sbjct: 240 RIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV-----FSEA 292
Query: 193 HIILGAAE---GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
+ AAE GL ++H V+YRD K +N+LLDE+ ++SD GLA +
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KK 345
Query: 250 VSTAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRL 305
A VGT GY AP+ ++ G + +D +S G +L+++L G +++ K + +
Sbjct: 346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 64 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 172 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 225
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 40 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 201
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 41 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 149 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 202
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 66 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 174 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 227
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+ YLH +VI+RD K N+ L+++ K+ DFGLA + G + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKTLCGTPN 207
Query: 260 YAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
Y AP+ + + GH + + D+WS G +LY +L G+ E
Sbjct: 208 YIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 87 IGEGGFGSV---YKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLE 141
+G G +GSV Y + ++ VA+KKL+R L ++ E++ L L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK----------VAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 142 HPNLVKLIG-YCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ L+ + + + ++ L + + ++A + ++ +L
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL---R 142
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
GL Y+H +I+RD K SNV ++E+ ++ DFGLAR+ T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWY 194
Query: 261 AAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ + H D+WS G ++ E+L G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRP--KLSDFGLAREGPMVGHTHVSTAVVGTF 258
G++Y H +QV +RD K N LLD + P K+ DFG ++ V H+ + VGT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS--VLHSQ-PKSTVGTP 180
Query: 259 GYAAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLL------ 306
Y AP+ + K +DVWS GV LY ML G E +N KT R+L
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 240
Query: 307 -EWVQQYPADSKKFGLIMDPRLEKEYSINEARK---------IGRLADNCLSKSSKDRPK 356
++V P I K SI E R + DN ++ + +
Sbjct: 241 PDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQ 300
Query: 357 MSQVVERLKQIV 368
Q +E + QI+
Sbjct: 301 PGQSIEEIMQII 312
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 48/235 (20%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLEHPN 144
IG G +G V ++ K E VVAIKK+ R + L K+ + E+ L L H +
Sbjct: 61 IGTGSYGHVCEAYDK-------LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 145 LVKLIGYCAV-DGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI---ILGAAE 200
+VK++ D E+ + +V E + D F + F + T LHI +
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLE------IADSDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--EGPMVGHTHVS------- 251
G+ Y+H +++RD K +N L++++ K+ DFGLAR + P G++ +
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 252 ----------------TAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLT 289
T V T Y AP+ I + T DVWS G + E+L
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH--KQWVAEVQFLG 138
++ + +G+G FG V K + + A+K +N+ + + EV+ L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
L+HPN++KL E +V E L D + R II
Sbjct: 77 KLDHPNIMKLFEIL----EDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQV 130
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
G+ Y+H+ +++RD K N+LL+ ++ K+ DFGL+ +
Sbjct: 131 FSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRI 184
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+G G +G VYK+ K + A+K++ G+ E+ L L+HPN+
Sbjct: 28 KVGRGTYGHVYKAKRK-----DGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNV 80
Query: 146 VKLIGYCAVDGERGIQRLLVY-EFMLNRSLEDHLFNRA------FPPLPWKTRLHIILGA 198
+ L +R + L Y E L ++ H ++A P K+ L+ IL
Sbjct: 81 ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL-- 138
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLL----DENFRPKLSDFGLAR--EGPMVGHTHVST 252
+G+ YLH V++RD K +N+L+ E R K++D G AR P+ +
Sbjct: 139 -DGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194
Query: 253 AVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTG 290
VV TF Y AP+ + H T D+W+ G + E+LT
Sbjct: 195 VVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 53/298 (17%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
DF + IG GGFG V+K+ + DG + IK++ + + + EV+ L
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRI---DGKT----YVIKRVKYNNEKAER----EVKALAK 60
Query: 140 LEHPNLVKLIG----------YCAVDGERGIQRLLV--YEFMLNRSLEDHLFNRAFPPLP 187
L+H N+V G + + R + L EF +LE + R L
Sbjct: 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
L + +G+ Y+H ++I RD K SN+ L + + K+ DFGL G
Sbjct: 121 KVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 177
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML-TGRRSLERNRPKTEQRLL 306
S GT Y +P+ I + + D+++ G++L E+L + E ++ T+ R
Sbjct: 178 RXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR-- 232
Query: 307 EWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERL 364
G+I D +KE + L LSK +DRP S+++ L
Sbjct: 233 ------------DGIISDIFDKKEKT---------LLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK-LNRDGLQGHK-QWVAEVQFLG 138
+ ++ KIG+G FG V+K+ + VA+KK L + +G + E++ L
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQK-------VALKKVLMENEKEGFPITALREIKILQ 71
Query: 139 VLEHPNLVKLIGYCAVDGE-----RGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKT 190
+L+H N+V LI C +G LV++F L L + L + K
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKG-SIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KR 128
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ ++L GL Y+H ++++RD KA+NVL+ + KL+DFGLAR + ++
Sbjct: 129 VMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 251 STAV--VGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
+ V T Y P+ + D+W G ++ EM T ++ N TEQ L
Sbjct: 183 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLA 239
Query: 308 WVQQ 311
+ Q
Sbjct: 240 LISQ 243
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 107 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 215 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 268
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-----FNRAFPPLPWKTRLHIILGAAEG 201
+L + GE+ + ++ +L+ E ++RA LP +
Sbjct: 77 RLRYFFYSSGEK--KDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
LAY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYY 188
Query: 261 AAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 87 IGEGGFGSV---YKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLE 141
+G G +GSV Y + ++ VA+KKL+R L ++ E++ L L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQK----------VAVKKLSRPFQSLIHARRTYRELRLLKHLK 77
Query: 142 HPNLVKLIG-YCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ L+ + + + ++ L + + +A + ++ +L
Sbjct: 78 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL---R 134
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
GL Y+H +I+RD K SNV ++E+ ++ DFGLAR+ T V T Y
Sbjct: 135 GLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQA-----DEEMTGYVATRWY 186
Query: 261 AAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ + H D+WS G ++ E+L G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH--KQWVAEVQFLG 138
++ + +G+G FG V K + + A+K +N+ + + EV+ L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQE-------YAVKVINKASAKNKDTSTILREVELLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGA 198
L+HPN++KL E +V E L D + R II
Sbjct: 77 KLDHPNIMKLFEIL----EDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQV 130
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLD---ENFRPKLSDFGLAREGPMVGHTHVSTAVV 255
G+ Y+H+ +++RD K N+LL+ ++ K+ DFGL+ +
Sbjct: 131 FSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRI 184
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y AP+ + G K DVWS GV+LY +L+G
Sbjct: 185 GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 29 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 137 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 190
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 33 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 141 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 194
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 189 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 244 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 294
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T + + GT Y AP+ + T D WS GV+L+ L+G +R +
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK-LNRDGLQGHK-QWVAEVQFLG 138
+ ++ KIG+G FG V+K+ + VA+KK L + +G + E++ L
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQK-------VALKKVLMENEKEGFPITALREIKILQ 72
Query: 139 VLEHPNLVKLIGYCAVDGE-----RGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKT 190
+L+H N+V LI C +G LV++F L L + L + K
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKG-SIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KR 129
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV 250
+ ++L GL Y+H ++++RD KA+NVL+ + KL+DFGLAR + ++
Sbjct: 130 VMQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 251 STAV--VGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
+ V T Y P+ + D+W G ++ EM T ++ N TEQ L
Sbjct: 184 NRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLA 240
Query: 308 WVQQ 311
+ Q
Sbjct: 241 LISQ 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+ YLH +VI+RD K N+ L+++ K+ DFGLA + G + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPN 207
Query: 260 YAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
Y AP+ + + GH + + D+WS G +LY +L G+ E
Sbjct: 208 YIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLF-NRAFPPLPWKT 190
E++ L L HP ++K+ + D E +V E M L D + N+ K
Sbjct: 203 TEIEILKKLNHPCIIKIKNF--FDAE---DYYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGH 247
+ +L A + YLHE +I+RD K NVLL +E+ K++DFG ++ ++G
Sbjct: 258 YFYQMLLAVQ---YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK---ILGE 308
Query: 248 THVSTAVVGTFGYAAPDY---IETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKT 301
T + + GT Y AP+ + T D WS GV+L+ L+G +R +
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 365
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK-LNRDGLQGHK-QWVAEVQFLG 138
+ ++ KIG+G FG V+K+ + VA+KK L + +G + E++ L
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQK-------VALKKVLMENEKEGFPITALREIKILQ 72
Query: 139 VLEHPNLVKLIGYCAVDGER----GIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
+L+H N+V LI C LV++F L L + L + K
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRV 130
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ ++L GL Y+H ++++RD KA+NVL+ + KL+DFGLAR + ++ +
Sbjct: 131 MQMLLN---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 252 TAV--VGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEW 308
V T Y P+ + D+W G ++ EM T ++ N TEQ L
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN---TEQHQLAL 241
Query: 309 VQQ 311
+ Q
Sbjct: 242 ISQ 244
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 32 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 140 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSRYYR 193
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVV------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
V+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 VVNHKNIIGLLNVFT--PQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 V--------GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS GV++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G FG VY++ + +VAIKK+ LQ + E+Q + L+H N+V
Sbjct: 28 IGNGSFGVVYQAKL-------CDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 147 KLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGL 202
+L + GE+ + +L Y + H ++RA LP + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 203 AYLHEGLEVQVIYRDFKASNVLLDENFRP-KLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
AY+H + +RD K N+LLD + KL DFG A++ + G +VS + + Y
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSRYYR 189
Query: 262 APDYI-ETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ I T+ DVWS G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 27/236 (11%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQ 135
Q T+ + IG G + SV K I A E V I K RD + E++
Sbjct: 19 QFTDGYEVKEDIGVGSY-SVCKRCIHKAT---NMEFAVKIIDKSKRDPTE-------EIE 67
Query: 136 -FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
L +HPN++ L + G +V E M L D + + F + +
Sbjct: 68 ILLRYGQHPNIITLKDVY----DDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAV 121
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVL-LDENFRP---KLSDFGLAREGPMVGHTHV 250
+ + + YLH V++RD K SN+L +DE+ P ++ DFG A++ + +
Sbjct: 122 LFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAENGL 176
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T + AP+ +E A D+WS GV+LY MLTG T + +L
Sbjct: 177 LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 142 HPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
HPN+++L E LV++ M L D+L + L K I+ E
Sbjct: 83 HPNIIQLKD----TYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 136
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+ LH+ + +++RD K N+LLD++ KL+DFG + + + +V GT Y
Sbjct: 137 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLRSVCGTPSYL 190
Query: 262 APDYIETGH------LTAKSDVWSFGVVLYEMLTG 290
AP+ IE + D+WS GV++Y +L G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 24/239 (10%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR-DGLQGHKQWVAEVQF 136
++DF +GEG +G V ++ KP +VAIKK+ D + + E++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIIL 196
L +H N++ + D + + + ++ L + + L + I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIY 119
Query: 197 GAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAR--------EGPMVGHT 248
+ LH VI+RD K SN+L++ N K+ DFGLAR G
Sbjct: 120 QTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
V T Y AP+ + T +++ DVWS G +L E+ RR + R Q LL
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+ YLH +VI+RD K N+ L+++ K+ DFGLA + G + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 207
Query: 260 YAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
Y AP+ + + GH + + D+WS G +LY +L G+ E
Sbjct: 208 YIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
V+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 VVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 V--------GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS GV++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
+G+ YLH +VI+RD K N+ L+++ K+ DFGLA + G + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPN 191
Query: 260 YAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLE 295
Y AP+ + + GH + + D+WS G +LY +L G+ E
Sbjct: 192 YIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 40/185 (21%)
Query: 192 LHIILGAAEGLAYLH-EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--------- 241
LHI + AE + +LH +GL ++RD K SN+ + K+ DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 242 --GPMVGH-THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML-TGRRSLERN 297
PM + TH VGT Y +P+ I + + K D++S G++L+E+L + +ER
Sbjct: 223 VLTPMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV 280
Query: 298 RPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKM 357
R T+ R L KF L+ + +E+ + + LS S +RP+
Sbjct: 281 RIITDVRNL-----------KFPLLFTQKYPQEH---------MMVQDMLSPSPTERPEA 320
Query: 358 SQVVE 362
+ ++E
Sbjct: 321 TDIIE 325
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLG 138
DF + +G GGFG V+++ K + + + ++L R+ + + EV+ L
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV------MREVKALA 59
Query: 139 VLEHPNLVK 147
LEHP +V+
Sbjct: 60 KLEHPGIVR 68
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 87 IGEGGFGSV---YKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLE 141
+G G +GSV Y + ++ VA+KKL+R L ++ E++ L L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQK----------VAVKKLSRPFQSLIHARRTYRELRLLKHLK 85
Query: 142 HPNLVKLIG-YCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
H N++ L+ + + + ++ L + + +A + ++ +L
Sbjct: 86 HENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL---R 142
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
GL Y+H +I+RD K SNV ++E+ ++ DFGLAR+ T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQA-----DEEMTGYVATRWY 194
Query: 261 AAPD-YIETGHLTAKSDVWSFGVVLYEMLTGR 291
AP+ + H D+WS G ++ E+L G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G GG G V+ +A D + V AIKK+ Q K + E++ + L+H N+V
Sbjct: 19 LGCGGNGLVF------SAVDNDCDKRV-AIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 147 KLIGYCAVDGER-----GIQRLLVYEFMLNRSLEDHLFN--RAFPPLPWKTRLHIILGAA 199
K+ G + G L +++ +E L N P L RL +
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLL 130
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFGLAR-EGPMVGHT-HVSTAVVG 256
GL Y+H V++RD K +N+ ++ E+ K+ DFGLAR P H H+S +V
Sbjct: 131 RGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
+ + + + T D+W+ G + EMLTG+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 142 HPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
HPN+++L E LV++ M L D+L + L K I+ E
Sbjct: 70 HPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 123
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+ LH+ + +++RD K N+LLD++ KL+DFG + + + V GT Y
Sbjct: 124 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLREVCGTPSYL 177
Query: 262 APDYIETGH------LTAKSDVWSFGVVLYEMLTG 290
AP+ IE + D+WS GV++Y +L G
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 85/194 (43%), Gaps = 34/194 (17%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRP--KLSDFGLAREGPMVGHTHVSTAVVGTF 258
G++Y H +QV +RD K N LLD + P K+ DFG ++ V H+ + VGT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS--VLHSQ-PKSTVGTP 179
Query: 259 GYAAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLL------ 306
Y AP+ + K +DVWS GV LY ML G E +N KT R+L
Sbjct: 180 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI 239
Query: 307 -EWVQQYPADSKKFGLIMDPRLEKEYSINEARK---------IGRLADNCLSK--SSKDR 354
++V P I K SI E R + DN ++ ++ D+
Sbjct: 240 PDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASDQ 299
Query: 355 PKMSQVVERLKQIV 368
P Q +E + QI+
Sbjct: 300 P--GQSIEEIMQII 311
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 85 LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
+KIGEG G V + K + VA+K ++ Q + EV + +H N
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQ-------VAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
+V++ V G + ++ EF+ +L D + T +L A LAY
Sbjct: 104 VVEMYKSYLV----GEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQA---LAY 156
Query: 205 LH-EGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
LH +G VI+RD K+ ++LL + R KLSDFG + + +VGT + AP
Sbjct: 157 LHAQG----VIHRDIKSDSILLTLDGRVKLSDFGFCAQ--ISKDVPKRKXLVGTPYWMAP 210
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ I + D+WS G+++ EM+ G
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 142 HPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
HPN+++L E LV++ M L D+L + L K I+ E
Sbjct: 83 HPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEV 136
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYA 261
+ LH+ + +++RD K N+LLD++ KL+DFG + + + V GT Y
Sbjct: 137 ICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---LDPGEKLREVCGTPSYL 190
Query: 262 APDYIETGH------LTAKSDVWSFGVVLYEMLTG 290
AP+ IE + D+WS GV++Y +L G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V++ + + A G+ + V+ + +++ ++ E+Q + VL HP L
Sbjct: 58 ELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHESDKETVR------KEIQTMSVLRHPTL 110
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V L D E +++YEFM L + + + + + + +GL ++
Sbjct: 111 VNLHDAFEDDNEM----VMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHM 165
Query: 206 HEGLEVQVIYRDFKASNVLLD--ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
HE ++ D K N++ + KL DFGL V+T GT +AAP
Sbjct: 166 HEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAP 219
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ E + +D+WS GV+ Y +L+G
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 22/229 (9%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G F SV + I G + V K + GL + E +L+HP++V
Sbjct: 32 IGKGPF-SVVRRCINRETGQQFAVKIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIV 89
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL--HIILGAAEGLAY 204
+L+ + DG +V+EFM L + RA + + H + E L Y
Sbjct: 90 ELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 205 LHEGLEVQVIYRDFKASNVLL--DENFRP-KLSDFGLAREGPMVGHTH-VSTAVVGTFGY 260
H+ +I+RD K VLL EN P KL FG+A + +G + V+ VGT +
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ---LGESGLVAGGRVGTPHF 199
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
AP+ ++ DVW GV+L+ +L+G T++RL E +
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEGI 244
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 22/229 (9%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG+G F SV + I G + V K + GL + E +L+HP++V
Sbjct: 34 IGKGPF-SVVRRCINRETGQQFAVKIVDVAKFTSSPGLST-EDLKREASICHMLKHPHIV 91
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL--HIILGAAEGLAY 204
+L+ + DG +V+EFM L + RA + + H + E L Y
Sbjct: 92 ELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 205 LHEGLEVQVIYRDFKASNVLL--DENFRP-KLSDFGLAREGPMVGHTH-VSTAVVGTFGY 260
H+ +I+RD K VLL EN P KL FG+A + +G + V+ VGT +
Sbjct: 148 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ---LGESGLVAGGRVGTPHF 201
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
AP+ ++ DVW GV+L+ +L+G T++RL E +
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEGI 246
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 128 KQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLP 187
+Q E+ L L+HPN+VKL+ +D +V+E + + + PL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVE--VLDDPNEDHLYMVFELVNQGPVME---VPTLKPLS 135
Query: 188 WKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGH 247
+G+ YLH ++I+RD K SN+L+ E+ K++DFG++ E G
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE--FKGS 190
Query: 248 THVSTAVVGTFGYAAPDYI-ETGHLTAKS--DVWSFGVVLYEMLTGR 291
+ + VGT + AP+ + ET + + DVW+ GV LY + G+
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 43/282 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH---KQWVAEVQFLGVLEHP 143
+G G +G+V +A DG + A V AIKKL R Q K+ E++ L + H
Sbjct: 33 VGSGAYGAVC------SAVDGRTGAKV-AIKKLYR-PFQSELFAKRAYRELRLLKHMRHE 84
Query: 144 NLVKLIGYCAVDG--ERGIQRLLVYEFM---LNRSLEDHLFNRAFPPLPWKTRLH-IILG 197
N++ L+ D + LV FM L + ++ + R+ ++
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG--------EDRIQFLVYQ 136
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
+GL Y+H +I+RD K N+ ++E+ K+ DFGLAR+ + + VV T
Sbjct: 137 MLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ----ADSEMXGXVV-T 188
Query: 258 FGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRR---------SLERNRPKTEQRLLE 307
Y AP+ I T D+WS G ++ EM+TG+ L+ T E
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248
Query: 308 WVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSK 349
+VQ+ +D K + P LEK+ + LA N L K
Sbjct: 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEK 290
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
V+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 VVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 V--------GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 87 IGEGGFGSVYKSSI--KPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPN 144
IG G +G+VYK S+ +P A V NR K + + ++EH N
Sbjct: 21 IGRGRYGAVYKGSLDERPVA--------VKVFSFANRQNFINEKN----IYRVPLMEHDN 68
Query: 145 LVKLI-GYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLA 203
+ + I G V + ++ LLV E+ N SL +L + W + + GLA
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLA 125
Query: 204 YLHEGL------EVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHV------- 250
YLH L + + +RD + NVL+ + +SDFGL+ + G+ V
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR--LTGNRLVRPGEEDN 183
Query: 251 -STAVVGTFGYAAPDYIETG-------HLTAKSDVWSFGVVLYEML 288
+ + VGT Y AP+ +E + D+++ G++ +E+
Sbjct: 184 AAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 41/233 (17%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLEHPN 144
IG G +G VY A D +E V AIKK+NR + L K+ + E+ L L+
Sbjct: 34 IGRGSYGYVY------LAYDKNTEKNV-AIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI---ILGAAEG 201
+++L D L + + D + F + T HI + G
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIV-----LEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS---------- 251
++HE +I+RD K +N LL+++ K+ DFGLAR T++
Sbjct: 142 ENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 252 ----------TAVVGTFGYAAPDYIETGHLTAKS-DVWSFGVVLYEMLTGRRS 293
T+ V T Y AP+ I KS D+WS G + E+L +S
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
++G G FG V++ + + A G+ + V+ + +++ ++ E+Q + VL HP L
Sbjct: 164 ELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHESDKETVR------KEIQTMSVLRHPTL 216
Query: 146 VKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAYL 205
V L D E +++YEFM L + + + + + + +GL ++
Sbjct: 217 VNLHDAFEDDNEM----VMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHM 271
Query: 206 HEGLEVQVIYRDFKASNVLLD--ENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
HE ++ D K N++ + KL DFGL V+T GT +AAP
Sbjct: 272 HEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAP 325
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ E + +D+WS GV+ Y +L+G
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G++Y H +QV +RD K N LLD + P+L V H+ + VGT Y
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKSTVGTPAY 182
Query: 261 AAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLL-------E 307
AP+ + K +DVWS GV LY ML G E +N KT R+L +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 308 WVQQYPADSKKFGLIMDPRLEKEYSINEARK---------IGRLADNCLSKSSKDRPKMS 358
+V P I K SI E R + DN ++ + +
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG 302
Query: 359 QVVERLKQIV 368
Q +E + QI+
Sbjct: 303 QSIEEIMQII 312
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ--- 129
++R D+ + IG G FG V K S V A+K L++ +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHK-------STRKVYAMKLLSKFEMIKRSDSAF 115
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
+ E + P +V+L + A +R + +V E+M L + + N P W
Sbjct: 116 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPE-KW- 169
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
R + AE + L + I+RD K N+LLD++ KL+DFG + G
Sbjct: 170 ARFY----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225
Query: 250 VSTAVVGTFGYAAPDYIET----GHLTAKSDVWSFGVVLYEMLTG 290
TA VGT Y +P+ +++ G+ + D WS GV LYEML G
Sbjct: 226 CDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENF---RPKLSDFGLAREGPMVGHT 248
+ +I EG+ YLH+ +++ D K N+LL + K+ DFG++R+ +GH
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK---IGHA 187
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
++GT Y AP+ + +T +D+W+ G++ Y +LT
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
V+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 VVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 C--------GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ--- 129
++R D+ + IG G FG V K S V A+K L++ +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHK-------STRKVYAMKLLSKFEMIKRSDSAF 120
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
+ E + P +V+L + A +R + +V E+M L + + N P W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPE-KW- 174
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
R + AE + L + I+RD K N+LLD++ KL+DFG + G
Sbjct: 175 ARFY----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 250 VSTAVVGTFGYAAPDYIET----GHLTAKSDVWSFGVVLYEMLTG 290
TA VGT Y +P+ +++ G+ + D WS GV LYEML G
Sbjct: 231 CDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 25/225 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ--- 129
++R D+ + IG G FG V K S V A+K L++ +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHK-------STRKVYAMKLLSKFEMIKRSDSAF 120
Query: 130 WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWK 189
+ E + P +V+L + A +R + +V E+M L + + N P W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMSNYDVPE-KW- 174
Query: 190 TRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTH 249
R + AE + L + I+RD K N+LLD++ KL+DFG + G
Sbjct: 175 ARFY----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 250 VSTAVVGTFGYAAPDYIET----GHLTAKSDVWSFGVVLYEMLTG 290
TA VGT Y +P+ +++ G+ + D WS GV LYEML G
Sbjct: 231 CDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 79
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 80 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+DE +++DFG A+ + G T
Sbjct: 136 QIVLT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKR--VKGRT---W 183
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + A VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 27 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 80 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 132
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 186
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGHTH 249
+I+ ++++H+ V V++RD K N+L ++N K+ DFG AR P
Sbjct: 110 YIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
+ T YAAP+ + D+WS GV+LY ML+G+
Sbjct: 167 KTPCF--TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 114 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 170 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 217
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 87
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 88 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 144 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 191
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 76/190 (40%), Gaps = 26/190 (13%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
G++Y H +QV +RD K N LLD + P+L V H+ VGT Y
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKDTVGTPAY 182
Query: 261 AAPDYIETGHLTAK-SDVWSFGVVLYEMLTGRRSLE-----RNRPKTEQRLL-------E 307
AP+ + K +DVWS GV LY ML G E +N KT R+L +
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD 242
Query: 308 WVQQYPADSKKFGLIMDPRLEKEYSINEARK---------IGRLADNCLSKSSKDRPKMS 358
+V P I K SI E R + DN ++ + +
Sbjct: 243 YVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPG 302
Query: 359 QVVERLKQIV 368
Q +E + QI+
Sbjct: 303 QSIEEIMQII 312
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ IG G FG V + + A + VV +K++ + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E+M + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ K++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 97/240 (40%), Gaps = 52/240 (21%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN------------ 120
+MR DF + IG G FG V +K A V A+K LN
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNAD-------KVFAMKILNKWEMLKRAETAC 120
Query: 121 ----RDGL-QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE 175
RD L G +W+ + + + NL ++ Y V G+ L E
Sbjct: 121 FREERDVLVNGDSKWITTLHY-AFQDDNNLYLVMDY-YVGGDL---------LTLLSKFE 169
Query: 176 DHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSD 235
D L P + L ++ A + + LH ++RD K N+L+D N +L+D
Sbjct: 170 DRL-----PEEMARFYLAEMVIAIDSVHQLH------YVHRDIKPDNILMDMNGHIRLAD 218
Query: 236 FGLAREGPMVGHTHVSTAVVGTFGYAAPDYIET-----GHLTAKSDVWSFGVVLYEMLTG 290
FG + M T S+ VGT Y +P+ ++ G + D WS GV +YEML G
Sbjct: 219 FGSCLK-LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ IG G FG V + + A + VV +K++ + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E+M + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ K++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPE 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 C--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 94 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 150 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 114 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 170 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGAT---W 217
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + D +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL-EFSFKDNS---NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 68/312 (21%)
Query: 80 DFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGV 139
DF + IG GGFG V+K+ + DG + I+++ + + + EV+ L
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRI---DGKT----YVIRRVKYNNEKAER----EVKALAK 61
Query: 140 LEHPNLVKLIGYC------------------------AVDGERGIQRLLV--YEFMLNRS 173
L+H N+V G C + + R + L EF +
Sbjct: 62 LDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 174 LEDHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKL 233
LE + R L L + +G+ Y+H ++I+RD K SN+ L + + K+
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKI 177
Query: 234 SDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML-TGRR 292
DFGL G T GT Y +P+ I + + D+++ G++L E+L
Sbjct: 178 GDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT 234
Query: 293 SLERNRPKTEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSK 352
+ E ++ T+ R G+I D +KE + L LSK +
Sbjct: 235 AFETSKFFTDLR--------------DGIISDIFDKKEKT---------LLQKLLSKKPE 271
Query: 353 DRPKMSQVVERL 364
DRP S+++ L
Sbjct: 272 DRPNTSEILRTL 283
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL Y D +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL Y D +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL Y D +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL-EYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ ++ IG G G V A T VA+KKL+R Q H K+ E+ L
Sbjct: 26 YQQLKPIGSGAQGIV-------CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIHMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I A D+WS G ++ E++ G
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 140 LEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAA 199
L+HP VKL +C D E+ L + ++ E + R
Sbjct: 94 LDHPFFVKLY-FCFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 200 EGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFG 259
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT
Sbjct: 148 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 260 YAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
Y +P+ + SD+W+ G ++Y+++ G
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 52/201 (25%)
Query: 185 PLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE--- 241
P+ + + A G+ +L + I+RD A N+LL EN K+ DFGLAR+
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 242 GPMV---GHTHVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNR 298
P G T + + AP+ I + KSDVWS+GV+L+E+ + S
Sbjct: 252 NPDYVRKGDTRL------PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGS----- 300
Query: 299 PKTEQRLLEWVQQYPADSKKFGLIMD----PRLEK-------EYSINEARKIGRLADNCL 347
YP G+ MD RL + EYS E I ++ +C
Sbjct: 301 ------------PYP------GVQMDEDFCSRLREGMRMRAPEYSTPE---IYQIMLDCW 339
Query: 348 SKSSKDRPKMSQVVERLKQIV 368
+ K+RP+ +++VE+L ++
Sbjct: 340 HRDPKERPRFAELVEKLGDLL 360
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFM---LNRSLEDHLFNRAFPPLPWKTR 191
+ H N++ L+ ++ ++ +V E M L++ ++ L + L ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS 251
G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 137 C--------GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMM 182
Query: 252 TAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
T V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G + P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + + VGT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 86 KIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNL 145
K+GEGGF V +G + A+K++ Q ++ E + HPN+
Sbjct: 36 KLGEGGFSYV-------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 146 VKLIGYCAVDGERGIQR--LLVYEFMLNRSLEDHL--FNRAFPPLPWKTRLHIILGAAEG 201
++L+ YC ERG + L+ F +L + + L L ++LG G
Sbjct: 89 LRLVAYCL--RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS---------T 252
L +H +RD K +N+LL + +P L D G + + H S
Sbjct: 147 LEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI--HVEGSRQALTLQDWA 201
Query: 253 AVVGTFGYAAPDYIETGH---LTAKSDVWSFGVVLYEMLTG 290
A T Y AP+ + ++DVWS G VLY M+ G
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 120 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 121 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + + VGT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 119 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 28 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 81 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 133
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 134 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPF 187
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ EM+ G
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 12 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 59
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 60 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 116
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 171
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 172 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 19/182 (10%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L ++H N+V L E LV + + L D + R K
Sbjct: 56 EIAVLKKIKHENIVTLEDI----YESTTHYYLVMQLVSGGELFDRILERGV--YTEKDAS 109
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRPKLSDFGLAREGPMVGHTH 249
+I + YLHE +++RD K N+L +EN + ++DFGL++ M +
Sbjct: 110 LVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGI 163
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWV 309
+STA GT GY AP+ + + D WS GV+ Y +L G +TE +L E +
Sbjct: 164 MSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE---ETESKLFEKI 219
Query: 310 QQ 311
++
Sbjct: 220 KE 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+++D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 11 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 58
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 115
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 170
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++Y+M G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 126 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 76 QATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQ 135
Q T+ + IG G + SV K I A E V I K RD + E++
Sbjct: 19 QFTDGYEVKEDIGVGSY-SVCKRCIHKAT---NXEFAVKIIDKSKRDPTE-------EIE 67
Query: 136 -FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
L +HPN++ L + G +V E L D + + F + +
Sbjct: 68 ILLRYGQHPNIITLKDVY----DDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAV 121
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVL-LDENFRP---KLSDFGLAREGPMVGHTHV 250
+ + + YLH V++RD K SN+L +DE+ P ++ DFG A++ + +
Sbjct: 122 LFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAENGL 176
Query: 251 STAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T + AP+ +E A D+WS GV+LY LTG T + +L
Sbjct: 177 LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 17 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 64
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 65 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 121
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 176
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 177 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 14 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 61
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 62 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 118
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 173
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 174 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 50 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 97
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 154
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 209
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 64 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 117 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 169
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 223
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 85
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 86 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 142 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 189
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 27 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 80 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 132
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 186
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 147 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLER-NRPKTEQRLLEWVQQYPA 314
+P+ + SD+W+ G ++Y+++ G N Q++++ +PA
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPA 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 25 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 77
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 78 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 130
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 131 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 184
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWV--AEVQFLGVLEHPN 144
IG+G FG V++ G VA+K + + + W AE+ +L H N
Sbjct: 37 IGKGRFGEVWR---------GKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN 84
Query: 145 LVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEGLAY 204
++ I D Q LV ++ + SL D+L NR + + + + L A GLA+
Sbjct: 85 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTV--EGMIKLALSTASGLAH 141
Query: 205 LH-EGLEVQ----VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV----- 254
LH E + Q + +RD K+ N+L+ +N ++D GLA V H + +
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPN 196
Query: 255 --VGTFGYAAP----DYIETGHLTA--KSDVWSFGVVLYEM 287
VGT Y AP D I H + ++D+++ G+V +E+
Sbjct: 197 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 19 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 72 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYL 124
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 125 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPY 178
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 27 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 80 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 132
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 133 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 186
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 94 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 150 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFGLA+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 64 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 117 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 169
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 223
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 63 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 116
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 170
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 79 NDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVAEVQF- 136
+D ++++G G +G V K P+ ++A+K++ Q K+ + ++
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSG-------QIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 137 LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP---PLPWKTRLH 193
+ ++ P V G +G+ I L ++ SL D + + +P
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMEL-----MDTSL-DKFYKQVIDKGQTIPEDILGK 157
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTA 253
I + + L +LH L V I+RD K SNVL++ + K+ DFG++ G +V T
Sbjct: 158 IAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKTI 212
Query: 254 VVGTFGYAAPDYI-----ETGHLTAKSDVWSFGVVLYEMLTGRRSLER-NRP--KTEQRL 305
G Y AP+ I + G+ + KSD+WS G+ + E+ R + P + +Q +
Sbjct: 213 DAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
Query: 306 LEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVE 362
E Q PAD KF + + CL K+SK+RP ++++
Sbjct: 272 EEPSPQLPAD--KF----------------SAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 94 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 150 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 94 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 150 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 XVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 19 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 72 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 124
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 125 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 178
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGY 260
L YLH +I+RD K N+LL+E+ +++DFG A+ + VGT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 261 AAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+P+ + SD+W+ G ++Y+++ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 63 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 116
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 117 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 170
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 171 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 93
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E+ + HL R P
Sbjct: 94 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+++D+ K++DFG A+ + G T
Sbjct: 150 QIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---W 197
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 20 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 73 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 125
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 179
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 20 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 73 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 125
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 179
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 113
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 114 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 170 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 217
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ IG G FG V + + A + VV +K++ + E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ K++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K + A + VV +K++ + E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 85
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 86 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 142 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 189
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILILELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
+HPN++ L + G LV E M L D + + F + ++ +
Sbjct: 79 QHPNIITLKDVY----DDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGK 132
Query: 201 GLAYLHEGLEVQVIYRDFKASNVL-LDENFRP---KLSDFGLAREGPMVGHTHVSTAVVG 256
+ YLH V++RD K SN+L +DE+ P ++ DFG A++ + +
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAENGLLMTPCY 187
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T + AP+ ++ D+WS G++LY ML G T + +L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 95/240 (39%), Gaps = 52/240 (21%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN------------ 120
EM+ DF + IG G FG V +K + + A+K LN
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMK-------NTERIYAMKILNKWEMLKRAETAC 120
Query: 121 ----RDGL-QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE 175
RD L G QW+ + + + N + L+ V G+ L E
Sbjct: 121 FREERDVLVNGDCQWITALHY--AFQDENHLYLVMDYYVGGDL---------LTLLSKFE 169
Query: 176 DHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSD 235
D L P + + ++ A + + LH ++RD K NVLLD N +L+D
Sbjct: 170 DKL-----PEDMARFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLAD 218
Query: 236 FGLAREGPMVGHTHVSTAVVGTFGYAAPDYIET-----GHLTAKSDVWSFGVVLYEMLTG 290
FG + G S A VGT Y +P+ ++ G + D WS GV +YEML G
Sbjct: 219 FGSCLKMNDDGTVQSSVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 20 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRLL-VYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILG 197
+ H N++ L+ ++ ++ VY M ++ +L L + +++
Sbjct: 73 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T V T
Sbjct: 129 MLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVT 182
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
Y AP+ I D+WS G ++ EM+ +
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ K++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNR--DGLQGHKQWVAEVQFLGVLEHPN 144
IG G +G VY + K A + VAIKK+NR + L K+ + E+ L L+
Sbjct: 36 IGRGSYGYVYLAYDKNANKN-------VAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 145 LVKLIGYCAVDGERGIQRLLVY-EFMLNRSLEDHLFNRAFPPLPWKTRLH---IILGAAE 200
+++L + LL + E + + D + F + T H I+
Sbjct: 89 IIRLHDLIIPED------LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 201 GLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVS--------- 251
G ++HE +I+RD K +N LL+++ K+ DFGLAR H+
Sbjct: 143 GEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 252 --------------TAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEMLTGRRS 293
T+ V T Y AP+ I + T D+WS G + E+L +S
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 26/217 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 31 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 83
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 84 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 136
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 137 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPY 190
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
V T Y AP+ I D+WS G ++ EM+ +
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAE 200
+HPN++ L + G LV E M L D + + F + ++ +
Sbjct: 79 QHPNIITLKDVY----DDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGK 132
Query: 201 GLAYLHEGLEVQVIYRDFKASNVL-LDENFRP---KLSDFGLAREGPMVGHTHVSTAVVG 256
+ YLH V++RD K SN+L +DE+ P ++ DFG A++ + +
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAENGLLMTPCY 187
Query: 257 TFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLL 306
T + AP+ ++ D+WS G++LY ML G T + +L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 XVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 95/240 (39%), Gaps = 52/240 (21%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLN------------ 120
EM+ DF + IG G FG V +K + + A+K LN
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMK-------NTERIYAMKILNKWEMLKRAETAC 136
Query: 121 ----RDGL-QGHKQWVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLE 175
RD L G QW+ + + + N + L+ V G+ L E
Sbjct: 137 FREERDVLVNGDCQWITALHY--AFQDENHLYLVMDYYVGGDL---------LTLLSKFE 185
Query: 176 DHLFNRAFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSD 235
D L P + + ++ A + + LH ++RD K NVLLD N +L+D
Sbjct: 186 DKL-----PEDMARFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLAD 234
Query: 236 FGLAREGPMVGHTHVSTAVVGTFGYAAPDYIET-----GHLTAKSDVWSFGVVLYEMLTG 290
FG + G S A VGT Y +P+ ++ G + D WS GV +YEML G
Sbjct: 235 FGSCLKMNDDGTVQSSVA-VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L ++HPN++ L E +L+ E + L D L + L +
Sbjct: 64 EVSILKEIQHPNVITLHEVY----ENKTDVILIGELVAGGELFDFLAEKE--SLTEEEAT 117
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ G+ YLH +Q+ + D K N+ LLD N R K+ DFGLA + +
Sbjct: 118 EFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK---IDFG 171
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D + V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAVLDRNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 79 XVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + + T
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPY 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEML 288
V T Y AP+ I D+WS G ++ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ +++DFGLA+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 37/225 (16%)
Query: 77 ATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKL----NRDGLQGHKQWVA 132
+ + + R+ K+GEG +G VYK A D + T VAIK++ +G+ G +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYK------AIDTVTNET-VAIKRIRLEHEEEGVPGTA--IR 82
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRL-LVYEFMLNRSLEDHLFNRAFPPLPWKTR 191
EV L L+H N+++L + RL L++E+ N L+ ++ P + +
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN-DLKKYMDKN--PDVSMRVI 134
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLL---DENFRP--KLSDFGLAREG--PM 244
+ G+ + H + ++RD K N+LL D + P K+ DFGLAR P+
Sbjct: 135 KSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 245 VGHTHVSTAVVGTFGYAAPD-YIETGHLTAKSDVWSFGVVLYEML 288
TH + T Y P+ + + H + D+WS + EML
Sbjct: 192 RQFTH----EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ K++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 219
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 220 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 225
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 226 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WTLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ ++ IG G G V A T VA+KKL+R Q H K+ E+ L
Sbjct: 24 YQQLKPIGSGAQGIV-------CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK 76
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ LV E M + +L L + ++
Sbjct: 77 CVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELM-----DANLCQVIHMELDHERMSYL 129
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR + T
Sbjct: 130 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPY 183
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
V T Y AP+ I D+WS G ++ E++ G
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKE--TTSHNS 175
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 176 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 179
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 180 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKE--TTSHNS 181
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 182 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 180
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 181 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WTLCGTPEYLAP 193
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 175
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 176 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V + + A + VV +K++ + E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---W 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT Y AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 174
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 175 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 173
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 174 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 79 NDFSRMLKIGEGGFGSV----YKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEV 134
+ F R+ +G G FG V +K S A + VV +K++ + E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT--------LNEK 92
Query: 135 QFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL--FNRAFPPLPWKTRL 192
+ L + P LVKL + +V E++ + HL R P
Sbjct: 93 RILQAVNFPFLVKL----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
I+L YLH + +IYRD K N+L+D+ +++DFG A+ + G T
Sbjct: 149 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW--- 196
Query: 253 AVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ GT AP+ I + D W+ GV++YEM G ++P
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 208
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+L+D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKE--TTSHNS 189
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++T + Y AP+ + D+WS GV++Y +L G
Sbjct: 190 LTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 74 MRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGHKQWVA 132
M +D ++++G G +G V K P+ ++A+K++ Q K+ +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSG-------QIMAVKRIRATVNSQEQKRLLM 54
Query: 133 EVQF-LGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFP---PLPW 188
++ + ++ P V G +G+ I L ++ SL D + + +P
Sbjct: 55 DLDISMRTVDCPFTVTFYGALFREGDVWICMEL-----MDTSL-DKFYKQVIDKGQTIPE 108
Query: 189 KTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHT 248
I + + L +LH L VI+RD K SNVL++ + K+ DFG++ G +V
Sbjct: 109 DILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDV 164
Query: 249 HVSTAVVGTFGYAAPDYI-----ETGHLTAKSDVWSFGVVLYEMLTGRRSLER-NRP--K 300
G Y AP+ I + G+ + KSD+WS G+ + E+ R + P +
Sbjct: 165 -AKDIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 222
Query: 301 TEQRLLEWVQQYPADSKKFGLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQV 360
+Q + E Q PAD KF + + CL K+SK+RP ++
Sbjct: 223 LKQVVEEPSPQLPAD--KF----------------SAEFVDFTSQCLKKNSKERPTYPEL 264
Query: 361 VE 362
++
Sbjct: 265 MQ 266
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRD-GLQGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPE 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
V T Y AP+ I D+WS G ++ EM+ +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 204 YLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAP 263
YLH + +IYRD K N+++D+ +++DFG A+ + G T + GT Y AP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKR--VKGRT---WXLCGTPEYLAP 207
Query: 264 DYIETGHLTAKSDVWSFGVVLYEMLTGRRSLERNRP 299
+ I + D W+ GV++YEM G ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 44 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 148
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 149 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 192
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 193 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 251
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 252 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 281
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 31 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 135
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 136 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 179
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 180 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 238
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 239 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 268
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 73 EMRQAT-NDFSRMLK-IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQW 130
E++Q + D+ +L+ +G G FG V++ ++ A G V K +N
Sbjct: 43 EVKQGSVYDYYDILEELGSGAFGVVHRC-VEKATG------RVFVAKFINTPYPLDKYTV 95
Query: 131 VAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKT 190
E+ + L HP L+ L E + +L+ EF+ L D + + +
Sbjct: 96 KNEISIMNQLHHPKLINLHDAF----EDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAE 150
Query: 191 RLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD--ENFRPKLSDFGLAREGPMVGHT 248
++ + A EGL ++HE +++ D K N++ + + K+ DFGLA + +
Sbjct: 151 VINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK---LNPD 204
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ T +AAP+ ++ + +D+W+ GV+ Y +L+G
Sbjct: 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 45 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 149
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 150 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 193
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 194 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 252
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 253 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 282
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 44 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 148
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 149 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 192
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 193 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 251
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 252 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 281
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 44 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 148
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 149 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 192
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 193 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 251
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 252 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 281
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 45 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 149
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 150 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 193
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 194 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 252
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 253 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 282
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 81 FSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGL-QGH-KQWVAEVQFLG 138
+ + IG G G V AA D E V AIKKL+R Q H K+ E+ +
Sbjct: 26 YQNLKPIGSGAQGIVC------AAYDAILERNV-AIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 139 VLEHPNLVKLIGYCAVDGERGIQRL----LVYEFMLNRSLEDHLFNRAFPPLPWKTRLHI 194
+ H N++ L+ ++ ++ +V E M + +L L + ++
Sbjct: 79 CVNHKNIIGLLN--VFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERMSYL 131
Query: 195 ILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAV 254
+ G+ +LH +I+RD K SN+++ + K+ DFGLAR G + +
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPE 185
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGR 291
V T Y AP+ I D+WS G ++ EM+ +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 32 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 136
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 137 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 180
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 181 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 240 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 269
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 17 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 121
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 122 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 165
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 166 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 225 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 59 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 163
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 164 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 207
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 208 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 266
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 267 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 296
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 51 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 155
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 156 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 199
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 200 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 258
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 259 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 288
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 17 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 121
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 122 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 165
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 166 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 225 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 16 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 120
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 121 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 164
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 165 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 223
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 224 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 253
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 116/287 (40%), Gaps = 35/287 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G F ++K + G T V +K L++ + + + L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-FNRAFPPLPWKTRLHIILGAAEGLAYL 205
G C G + +LV EF+ SL+ +L N+ + WK + L AA +
Sbjct: 76 LNYGVCVC----GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA-----M 126
Query: 206 HEGLEVQVIYRDFKASNVLL--DENFRPKLSDFGLAREGPMVGHTHVSTAVVGT-FGYAA 262
H E +I+ + A N+LL +E+ + F + P + T + ++ +
Sbjct: 127 HFLEENTLIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITVLPKDILQERIPWVP 185
Query: 263 PDYIET-GHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKFG 320
P+ IE +L +D WSFG L+E+ + G + L + + + E Q PA
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP----- 240
Query: 321 LIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+A ++ L +NC+ RP ++ L +
Sbjct: 241 --------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 75 RQATNDFSRM-LKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQG--HKQWV 131
+Q DF + ++G G F V K K G A K+ +R +G ++
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKST---GLEYAAKFIKKRQSRASRRGVCREEIE 63
Query: 132 AEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR 191
EV L + HPN++ L E +L+ E + L D L + L +
Sbjct: 64 REVSILRQVLHPNIITLHDVY----ENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 192 LHIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGH 247
I +G+ YLH ++ + D K N+ LLD+N KL DFGLA E +
Sbjct: 118 TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE---IED 171
Query: 248 THVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 17 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 121
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 122 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 165
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 166 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 225 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 31 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 135
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 136 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 179
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLERN 297
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E +
Sbjct: 180 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 15 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 119
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 120 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 163
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 164 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 222
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 223 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 59 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 163
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 164 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 207
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 208 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 266
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R E Q L+ W P+D F
Sbjct: 267 QVFFRQRVSXECQHLIRWCLALRPSDRPTF 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L + HPN++ L E +L+ E + L D L + L
Sbjct: 58 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEAT 111
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ +G+ YLH ++ + D K N+ LLD+N R KL DFG+A + +
Sbjct: 112 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 165
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 45 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 149
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 150 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 193
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 194 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 252
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R E Q L+ W P+D F
Sbjct: 253 QVFFRQRVSXECQHLIRWCLALRPSDRPTF 282
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 16 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLI----LERMEPVQDL--FDFITERGALQEELARSFF-- 120
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 121 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 164
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 165 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 223
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 224 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 253
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 45 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 149
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 150 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 193
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 194 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 252
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R E Q L+ W P+D F
Sbjct: 253 QVFFRQRVSXECQHLIRWCLALRPSDRPTF 282
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 12 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 116
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 117 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 160
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 161 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 220 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 249
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 44 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 148
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 149 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 192
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 193 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 251
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R E Q L+ W P+D F
Sbjct: 252 QVFFRQRVSXECQHLIRWCLALRPSDRPTF 281
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 34/225 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-----------KQWVAEVQ 135
I G +G+V AG SE VAIK++ G K+ + E++
Sbjct: 30 ISSGSYGAV-------CAG-VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL--- 192
L HPN++ L E + +L + ++ L + ++ P +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
HI+LG L LHE V++RD N+LL +N + DF LARE + T
Sbjct: 142 HILLG----LHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KT 191
Query: 253 AVVGTFGYAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLER 296
V Y AP+ + + T D+WS G V+ EM R++L R
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFR 235
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 32 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 136
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 137 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 180
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLERN 297
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E +
Sbjct: 181 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 32 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 136
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 137 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 180
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLERN 297
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E +
Sbjct: 181 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L + HPN++ L E +L+ E + L D L + L
Sbjct: 65 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEAT 118
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ +G+ YLH ++ + D K N+ LLD+N R KL DFG+A + +
Sbjct: 119 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 172
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 111/270 (41%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 12 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 116
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 117 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 160
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 161 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 219
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R +E Q L+ W P+D F
Sbjct: 220 QVFFRQRVSSECQHLIRWCLALRPSDRPTF 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 69/270 (25%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 64 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 168
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 169 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 212
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLE-------- 295
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E
Sbjct: 213 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 271
Query: 296 ----RNRPKTE-QRLLEWVQQY-PADSKKF 319
R R E Q L+ W P+D F
Sbjct: 272 QVFFRQRVSXECQHLIRWCLALRPSDRPTF 301
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 50/247 (20%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+GGFG+V+ AG ++ VAIK + R+ + G W + L+
Sbjct: 39 LGKGGFGTVF-------AGHRLTDRLQVAIKVIPRNRVLG---WSPLSDSVTCPLEVALL 88
Query: 147 KLIGYCAVDGERGIQRLLVY-----EFMLNRSLEDHLFNRAFPPLPWKTRLHII-----L 196
+G A G G+ RLL + FML + R PLP + I L
Sbjct: 89 WKVG--AGGGHPGVIRLLDWFETQEGFML-------VLER---PLPAQDLFDYITEKGPL 136
Query: 197 GAAEGLAYLHEGLEV-------QVIYRDFKASNVLLD-ENFRPKLSDFGLAREGPMVGHT 248
G + + + V++RD K N+L+D KL DFG G ++ H
Sbjct: 137 GEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG---SGALL-HD 192
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTA-KSDVWSFGVVLYEMLTGRRSLERNRPKTEQRLLE 307
T GT Y+ P++I A + VWS G++LY+M+ G ER+ Q +LE
Sbjct: 193 EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-----QEILE 247
Query: 308 WVQQYPA 314
+PA
Sbjct: 248 AELHFPA 254
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 34/225 (15%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGH-----------KQWVAEVQ 135
I G +G+V AG SE VAIK++ G K+ + E++
Sbjct: 30 ISSGSYGAV-------CAG-VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 136 FLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL--- 192
L HPN++ L E + +L + ++ L + ++ P +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVST 252
HI+LG LH E V++RD N+LL +N + DF LARE + T
Sbjct: 142 HILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KT 191
Query: 253 AVVGTFGYAAPDYI-ETGHLTAKSDVWSFGVVLYEMLTGRRSLER 296
V Y AP+ + + T D+WS G V+ EM R++L R
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFR 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 26/217 (11%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLE-HPNL 145
+ EGGF VY++ G G A+K+L + + ++ + EV F+ L HPN+
Sbjct: 36 LAEGGFAFVYEAQ---DVGSGRE----YALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 146 VKLIGYCAVDGERG----IQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
V+ ++ E + LL+ E + +E + PL T L I
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 202 LAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLA---REGPMVGHTHVSTAVV--- 255
+ ++H + +I+RD K N+LL KL DFG A P + A+V
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 256 ----GTFGYAAPDYIE---TGHLTAKSDVWSFGVVLY 285
T Y P+ I+ + K D+W+ G +LY
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
EV L + HPN++ L E +L+ E + L D L + L
Sbjct: 79 EVNILREIRHPNIITLHDIF----ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEAT 132
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNV-LLDENF---RPKLSDFGLAREGPMVGHT 248
+ +G+ YLH ++ + D K N+ LLD+N R KL DFG+A + +
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IEAG 186
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ + GT + AP+ + L ++D+WS GV+ Y +L+G
Sbjct: 187 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
E R+ + + ++G G FG V++ K A+KK+ + + V
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDK-------QTGFQCAVKKVRLEVFR-----VE 99
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L P +V L G AV G + E + SL + + LP L
Sbjct: 100 ELVACAGLSSPRIVPLYG--AV--REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRAL 153
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFG--LAREGPMVGHTH 249
+ + A EGL YLH ++++ D KA NVLL + R L DFG L + +G +
Sbjct: 154 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210
Query: 250 VSTAVV-GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++ + GT + AP+ + AK D+WS ++ ML G
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
E R+ + + ++G G FG V++ K A+KK+ + + V
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDK-------QTGFQCAVKKVRLEVFR-----VE 115
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L P +V L G AV G + E + SL + + LP L
Sbjct: 116 ELVACAGLSSPRIVPLYG--AV--REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRAL 169
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFG--LAREGPMVGHTH 249
+ + A EGL YLH ++++ D KA NVLL + R L DFG L + +G +
Sbjct: 170 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 226
Query: 250 VSTAVV-GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++ + GT + AP+ + AK D+WS ++ ML G
Sbjct: 227 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 199 AEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTHVSTAV 254
E + YLH + + +RD K N+L RP KL+DFG A+E H ++T
Sbjct: 171 GEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKE--TTSHNSLTTPC 224
Query: 255 VGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ Y AP+ + D WS GV+ Y +L G
Sbjct: 225 YTPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
+G+G F ++K + G T V +K L++ + + + L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 147 KLIGYCAVDGERGIQRLLVYEFMLNRSLEDHL-FNRAFPPLPWKTRLHIILGAAEGLAY- 204
G C G + +LV EF+ SL+ +L N+ + WK L A+ LA+
Sbjct: 76 LNYGVCFC----GDENILVQEFVKFGSLDTYLKKNKNCINILWK------LEVAKQLAWA 125
Query: 205 LHEGLEVQVIYRDFKASNVLL--DENFRPKLSDFGLAREGPMVGHTHVSTAVVGT-FGYA 261
+H E +I+ + A N+LL +E+ + F + P + T + ++ +
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITVLPKDILQERIPWV 184
Query: 262 APDYIET-GHLTAKSDVWSFGVVLYEMLT-GRRSLERNRPKTEQRLLEWVQQYPADSKKF 319
P+ IE +L +D WSFG L+E+ + G + L + + + E Q PA
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP---- 240
Query: 320 GLIMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVVERLKQI 367
+A ++ L +NC+ RP ++ L +
Sbjct: 241 ---------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 194 IILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRP----KLSDFGLAREGPMVGHTH 249
I+ E + YLH + + +RD K N+L RP KL+DFG A+E H
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKET--TSHNS 173
Query: 250 VSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++ + Y AP+ + D+WS GV++Y +L G
Sbjct: 174 LTEPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 39 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 143
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 144 --WQV--------LEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 187
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLERN 297
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E +
Sbjct: 188 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
E R+ + + ++G G FG V++ K A+KK+ + + V
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDK-------QTGFQCAVKKVRLEVFR-----VE 113
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L P +V L G AV G + E + SL + + LP L
Sbjct: 114 ELVACAGLSSPRIVPLYG--AV--REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRAL 167
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFG--LAREGPMVGHTH 249
+ + A EGL YLH ++++ D KA NVLL + R L DFG L + +G +
Sbjct: 168 YYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 224
Query: 250 VSTAVV-GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++ + GT + AP+ + AK D+WS ++ ML G
Sbjct: 225 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G +G V K A GT A KK+ + ++ ++ E++ + L+HPN++
Sbjct: 17 IGRGSWGEV-----KIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 147 KLIGYCAVDGERGIQRLLVYEF-----MLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
+L Y + I LV E + R + +F + I+
Sbjct: 70 RL--YETFEDNTDI--YLVMELCTGGELFERVVHKRVFRES-------DAARIMKDVLSA 118
Query: 202 LAYLHEGLEVQVIYRDFKASNVLL--DENFRP-KLSDFGLA---REGPMVGHTHVSTAVV 255
+AY H ++ V +RD K N L D P KL DFGLA + G M+ V
Sbjct: 119 VAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM------RTKV 169
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y +P +E G + D WS GV++Y +L G
Sbjct: 170 GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR-----LHII 195
+HPN+++ YC+ +R L + + N +L+D + ++ K + + ++
Sbjct: 85 DHPNVIRY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-------------ENFRPKLSDFGLARE- 241
A G+A+LH +++I+RD K N+L+ EN R +SDFGL ++
Sbjct: 140 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 242 --GPMVGHTHVSTAVVGTFGYAAPDYIETG---HLTAKSDVWSFGVVLYEMLT 289
G +++ GT G+ AP+ +E LT D++S G V Y +L+
Sbjct: 197 DSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVAEVQFLGVLEHPNLV 146
IG G +G V K A GT A KK+ + ++ ++ E++ + L+HPN++
Sbjct: 34 IGRGSWGEV-----KIAVQKGTR--IRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 147 KLIGYCAVDGERGIQRLLVYEF-----MLNRSLEDHLFNRAFPPLPWKTRLHIILGAAEG 201
+L Y + I LV E + R + +F + I+
Sbjct: 87 RL--YETFEDNTDI--YLVMELCTGGELFERVVHKRVFRES-------DAARIMKDVLSA 135
Query: 202 LAYLHEGLEVQVIYRDFKASNVLL--DENFRP-KLSDFGLA---REGPMVGHTHVSTAVV 255
+AY H ++ V +RD K N L D P KL DFGLA + G M+ V
Sbjct: 136 VAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM------RTKV 186
Query: 256 GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
GT Y +P +E G + D WS GV++Y +L G
Sbjct: 187 GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 37/177 (20%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR-----LHII 195
+HPN+++ YC+ +R L + + N +L+D + ++ K + + ++
Sbjct: 67 DHPNVIRY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-------------ENFRPKLSDFGLARE- 241
A G+A+LH +++I+RD K N+L+ EN R +SDFGL ++
Sbjct: 122 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 242 --GPMVGHTHVSTAVVGTFGYAAPDYIETGH-------LTAKSDVWSFGVVLYEMLT 289
G T+++ GT G+ AP+ +E + LT D++S G V Y +L+
Sbjct: 179 DSGQSSFRTNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 33/173 (19%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR-----LHII 195
+HPN+++ YC+ +R L + + N +L+D + ++ K + + ++
Sbjct: 85 DHPNVIRY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-------------ENFRPKLSDFGLARE- 241
A G+A+LH +++I+RD K N+L+ EN R +SDFGL ++
Sbjct: 140 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 242 --GPMVGHTHVSTAVVGTFGYAAPDYIETG---HLTAKSDVWSFGVVLYEMLT 289
G +++ GT G+ AP+ +E LT D++S G V Y +L+
Sbjct: 197 DSGQXXFRXNLNNP-SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 198 AAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGT 257
A+G+ +L + I+RD A N+LL E K+ DFGLAR+
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 258 FGYAAPDYIETGHLTAKSDVWSFGVVLYEMLT 289
+ AP+ I T +SDVWSFGV+L+E+ +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 55/234 (23%)
Query: 87 IGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQ----------------- 129
+G GGFGSVY +G S+ VAIK + +D + +
Sbjct: 12 LGSGGFGSVY-------SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 130 ---WVAEVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNR-SLEDHLFNRAFPP 185
+ ++ L E P+ LI ++ +Q L ++F+ R +L++ L F
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLI----LERPEPVQDL--FDFITERGALQEELARSFF-- 116
Query: 186 LPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDEN-FRPKLSDFGLAREGPM 244
W+ E + + H V++RD K N+L+D N KL DFG G +
Sbjct: 117 --WQV--------LEAVRHCHN---XGVLHRDIKDENILIDLNRGELKLIDFG---SGAL 160
Query: 245 VGHTHVSTAVVGTFGYAAPDYIETGHLTAKSD-VWSFGVVLYEMLTGRRSLERN 297
+ T V T GT Y+ P++I +S VWS G++LY+M+ G E +
Sbjct: 161 LKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 78 TNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKK---LNRDGLQGHK--QWVA 132
+ +S M +G G FG V+ + K + E V IKK L ++ K +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDK----EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 133 EVQFLGVLEHPNLVKLI------GYCAVDGERGIQRLLVYEFM-----LNRSLEDHLFNR 181
E+ L +EH N++K++ G+ + E+ L ++ F+ L+ L ++F +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 182 AFPPLPWKTRLHIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLDENFRPKLSDFGLARE 241
L +A G L + +I+RD K N+++ E+F KL DFG A
Sbjct: 139 --------------LVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAA- 178
Query: 242 GPMVGHTHVSTAVVGTFGYAAPDYIETG-HLTAKSDVWSFGVVLYEML 288
+ + GT Y AP+ + + + ++WS GV LY ++
Sbjct: 179 --YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 25/222 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
E R+ + + L++G G FG V++ K A+KK+ + +
Sbjct: 87 EYREEVHWATHQLRLGRGSFGEVHRMEDK-------QTGFQCAVKKVRLEVFRAE----- 134
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L P +V L G AV G + E + SL + + LP L
Sbjct: 135 ELMACAGLTSPRIVPLYG--AV--REGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRAL 188
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFG--LAREGPMVGHTH 249
+ + A EGL YLH ++++ D KA NVLL + L DFG + + +G +
Sbjct: 189 YYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSL 245
Query: 250 VSTAVV-GTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
++ + GT + AP+ + AK DVWS ++ ML G
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 215 YRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHLTAK 274
+RD K N+L+ + L DFG+A T + VGT Y AP+ H T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAPERFSESHATYR 215
Query: 275 SDVWSFGVVLYEMLTG 290
+D+++ VLYE LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 37/177 (20%)
Query: 141 EHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTR-----LHII 195
+HPN+++ YC+ +R L + + N +L+D + ++ K + + ++
Sbjct: 67 DHPNVIRY--YCSETTDRF---LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 196 LGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-------------ENFRPKLSDFGLARE- 241
A G+A+LH +++I+RD K N+L+ EN R +SDFGL ++
Sbjct: 122 RQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 242 --GPMVGHTHVSTAVVGTFGYAAPDYIETGH-------LTAKSDVWSFGVVLYEMLT 289
G +++ GT G+ AP+ +E + LT D++S G V Y +L+
Sbjct: 179 DSGQXXFRXNLNNP-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Query: 213 VIYRDFKASNVLLDENF-RPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYIETGHL 271
V++RD K N+L+D N KL DFG G ++ T V T GT Y+ P++I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSPPEWIRYHRY 233
Query: 272 TAKSD-VWSFGVVLYEMLTGRRSLE------------RNRPKTE-QRLLEWVQQY-PADS 316
+S VWS G++LY+M+ G E R R +E Q L+ W P+D
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 293
Query: 317 KKF 319
F
Sbjct: 294 PTF 296
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 213 VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYI------ 266
+++ D K +N L+ + KL DFG+A + + V + VGT Y P+ I
Sbjct: 132 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 267 -ETGHLTAKS----DVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
E G +K DVWS G +LY M G+ QQ K
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLHA 235
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
I+DP E E+ + + + CL + K R + +++
Sbjct: 236 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 27/160 (16%)
Query: 213 VIYRDFKASNVLLDENFRPKLSDFGLAREGPMVGHTHVSTAVVGTFGYAAPDYI------ 266
+++ D K +N L+ + KL DFG+A + + V + VGT Y P+ I
Sbjct: 128 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 267 -ETGHLTAKS----DVWSFGVVLYEMLTGRRSLERNRPKTEQRLLEWVQQYPADSKKFGL 321
E G +K DVWS G +LY M G+ QQ K
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQISKLHA 231
Query: 322 IMDPRLEKEYSINEARKIGRLADNCLSKSSKDRPKMSQVV 361
I+DP E E+ + + + CL + K R + +++
Sbjct: 232 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Query: 73 EMRQATNDFSRMLKIGEGGFGSVYKSSIKPAAGDGTSEATVVAIKKLNRDGLQGHKQWVA 132
E R+ + + L++G G FG V++ K A+KK+ + +
Sbjct: 68 EYREEVHWATHQLRLGRGSFGEVHRMEDK-------QTGFQCAVKKVRLEVFRAE----- 115
Query: 133 EVQFLGVLEHPNLVKLIGYCAVDGERGIQRLLVYEFMLNRSLEDHLFNRAFPPLPWKTRL 192
E+ L P +V L G AV G + E + SL + + LP L
Sbjct: 116 ELMACAGLTSPRIVPLYG--AV--REGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRAL 169
Query: 193 HIILGAAEGLAYLHEGLEVQVIYRDFKASNVLLD-ENFRPKLSDFGLA---REGPMVGHT 248
+ + A EGL YLH ++++ D KA NVLL + L DFG A + +
Sbjct: 170 YYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL 226
Query: 249 HVSTAVVGTFGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTG 290
+ GT + AP+ + AK DVWS ++ ML G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,654,691
Number of Sequences: 62578
Number of extensions: 526266
Number of successful extensions: 4302
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 1553
Number of HSP's gapped (non-prelim): 1175
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)