Query 013794
Match_columns 436
No_of_seqs 173 out of 311
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 17:14:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013794.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013794hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t98a2 a.47.6.1 (A:119-281) C 78.7 10 0.00074 32.3 11.1 78 23-101 40-119 (163)
2 d1l9la_ a.64.1.1 (A:) Granulys 60.7 13 0.00092 26.8 6.8 63 89-163 6-69 (74)
3 d2gtga1 a.64.1.1 (A:2-79) Sapo 59.1 21 0.0015 25.2 7.8 65 89-164 6-71 (78)
4 d1n69a_ a.64.1.3 (A:) Saposin 42.9 30 0.0022 24.8 6.4 56 88-149 5-62 (78)
5 d1nkla_ a.64.1.1 (A:) NK-lysin 29.9 41 0.0029 23.7 5.2 56 89-150 6-61 (78)
6 d1vola1 a.74.1.2 (A:113-207) T 28.8 45 0.0033 24.4 5.4 23 170-192 73-95 (95)
7 d1of9a_ a.64.1.4 (A:) Ameobapo 28.0 92 0.0067 21.8 7.7 65 88-164 6-71 (77)
8 d1zavu1 a.108.1.1 (U:1-30) Rib 27.3 13 0.00097 23.3 1.6 17 126-142 14-30 (30)
9 d1nhoa_ c.47.1.1 (A:) MTH807, 20.8 9.2 0.00067 27.6 -0.1 27 118-144 7-33 (85)
10 d1t6sa1 a.4.5.60 (A:1-85) Segr 18.8 1.2E+02 0.0087 22.0 6.1 23 108-130 6-28 (85)
No 1
>d1t98a2 a.47.6.1 (A:119-281) Chromosome partition protein MukF (KicB), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=78.74 E-value=10 Score=32.30 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=68.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHhhh
Q 013794 23 SKCKTAAKMAVARIKLLRNKREAVVRQMRRDIALLLQSKQDATARIRVEHVIREQ--NVLAANEFIELFCELIVARLSII 100 (436)
Q Consensus 23 sKcKt~LKLAisRLklLqnKr~a~~kq~RrDIAqLL~~Gk~e~ArIRVE~lIrEd--~~ieayEiLElyCElLlaRl~lI 100 (436)
.-+|-.+--...+|.+-|+-..++..+.+.|||.||.+. .-.|-..+|+|+.|- ++-|+-|+|+---+-|.+.+--|
T Consensus 40 apLkySVaeifd~Idl~QR~mDeQQ~~Vk~eIA~LL~qd-W~~AI~~Ce~LL~eTs~tLRELqdtL~aagd~lqa~Ll~I 118 (163)
T d1t98a2 40 APLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKD-WRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRI 118 (163)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhheeHHHHHhhhhHHHHhHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHH
Confidence 457777888889999999999999999999999999988 666999999999974 67889999999888888877766
Q ss_pred h
Q 013794 101 A 101 (436)
Q Consensus 101 e 101 (436)
+
T Consensus 119 Q 119 (163)
T d1t98a2 119 Q 119 (163)
T ss_dssp H
T ss_pred H
Confidence 5
No 2
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.66 E-value=13 Score=26.84 Aligned_cols=63 Identities=16% Similarity=0.294 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHH
Q 013794 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLI 163 (436)
Q Consensus 89 yCElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlP-EL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv 163 (436)
-|++++..+.-+-..+. -.++.+++..+ |..+| .+......|...||..++..... +++|..|
T Consensus 6 tC~~vv~~ve~l~~n~t-~~~I~~~l~~~------C~~lp~~~~~~C~~lv~~Y~~~ii~~l~~-----~~~P~~I 69 (74)
T d1l9la_ 6 TCLTIVQKLKKMVDKPT-QRSVSNAATRV------CRTGRSRWRDVCRNFMRRYQSRVIQGLVA-----GETAQQI 69 (74)
T ss_dssp HHHHHHHHHHHHCSSCC-HHHHHHHHHHG------GGSSCHHHHHHHHHHHHHHHHHHHHHHHT-----TCCHHHH
T ss_pred HHHHHHHHHHHHhCCCC-HHHHHHHHHhH------HHHCCHHHHHHHHHHHHHHHHHHHHHHHH-----CCCHHHH
Confidence 58888888766543332 35566666554 56777 58999999999999999876542 4566654
No 3
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.15 E-value=21 Score=25.16 Aligned_cols=65 Identities=18% Similarity=0.425 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHh
Q 013794 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIE 164 (436)
Q Consensus 89 yCElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlP-EL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~ 164 (436)
.|+.++..+.-+-+...--.++++++..+ |.-+| ++....+.|..+||..++..... .++|.-+-
T Consensus 6 ~C~~~v~~~~~~l~~~~t~~~I~~~l~~~------C~~lp~~~~~~C~~~v~~y~~~ii~~l~~-----~~~p~~iC 71 (78)
T d2gtga1 6 VCEFLVKEVTKLIDNNKTEKEILDAFDKM------CSKLPKSLSEECQEVVDTYGSSILSILLE-----EVSPELVC 71 (78)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHH------TTSSCHHHHHHHHHHHHHHHHHHHHHHHT-----TCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHH------HHhCCcchhhhhHHHHHHHHHHHHHHHHh-----CCCHHHHH
Confidence 57888877766555555556677777664 55677 58999999999999999876532 45665443
No 4
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.94 E-value=30 Score=24.82 Aligned_cols=56 Identities=13% Similarity=0.234 Sum_probs=36.4
Q ss_pred HHHHHHHHHHh-hhhhcCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHH
Q 013794 88 LFCELIVARLS-IIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAA 149 (436)
Q Consensus 88 lyCElLlaRl~-lIe~~kecP~eLkEAVsSLIfAApR~sDlP-EL~~IR~~f~~KYGkeFv~aa 149 (436)
..|++++.-+. +|...+..-..+..++-.+ |.-+| .+......|..+||..++...
T Consensus 5 ~~C~~~v~~v~~~l~~n~t~~~~I~~~l~~~------C~~lp~~~~~~C~~~V~~y~~~ii~~l 62 (78)
T d1n69a_ 5 QDCIQMVTDIQTAVRTNSTFVQALVEHVKEE------CDRLGPGMADICKNYISQYSEIAIQMM 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH------GGGGCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHH------HHhCChHHHHHhHHHHHHHHHHHHHHH
Confidence 35777777774 4444333333344444443 34556 788999999999999998753
No 5
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=29.94 E-value=41 Score=23.68 Aligned_cols=56 Identities=9% Similarity=0.126 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCchhHHHHHHHHHHHHcHHHHHHHh
Q 013794 89 FCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIPELGAIRDIFEKKYGKDFVSAAT 150 (436)
Q Consensus 89 yCElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlPEL~~IR~~f~~KYGkeFv~aa~ 150 (436)
.|++++..+.-+-....--.++..++-.+.- .+|-+......|..+||..+.....
T Consensus 6 ~C~~~v~~~~~~l~~~~t~~~I~~~l~~~C~------~lp~~~~~C~~~v~~y~~~ii~~l~ 61 (78)
T d1nkla_ 6 SCRKIIQKLEDMVGPQPNEDTVTQAASQVCD------KLKILRGLCKKIMRSFLRRISWDIL 61 (78)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH------HSCSTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCccHHHHHHHHHHHHh------cCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4777777777665554445667777666542 3455778899999999999887653
No 6
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.77 E-value=45 Score=24.45 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=16.0
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCC
Q 013794 170 TPTGEVKLKVMKEIAKEFQIDWD 192 (436)
Q Consensus 170 ~Ps~elv~kyL~EIAkEy~I~w~ 192 (436)
..+....-+..+.|.++.+++.+
T Consensus 73 ~i~~~~i~k~~k~i~~~L~~~v~ 95 (95)
T d1vola1 73 RISKKEIGRCFKLILKALETSVD 95 (95)
T ss_dssp CSCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHHCCcCC
Confidence 35566667778888888877653
No 7
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=27.97 E-value=92 Score=21.79 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhhhcCCCChhHHHHHHHHHhhCCCCCCch-hHHHHHHHHHHHHcHHHHHHHhhcCCCCCCCHHHHh
Q 013794 88 LFCELIVARLSIIAKRRECPADLKEGIASVIFAAPRCSEIP-ELGAIRDIFEKKYGKDFVSAATDLRPNSGVNRMLIE 164 (436)
Q Consensus 88 lyCElLlaRl~lIe~~kecP~eLkEAVsSLIfAApR~sDlP-EL~~IR~~f~~KYGkeFv~aa~elr~~~~VN~kIv~ 164 (436)
..|++++..+.-+.+.+. -.++.+++..+. .-+| .+....+.|..+||..++..... .++|..+-
T Consensus 6 ~~C~~~v~~~~~l~~~~t-~~~I~~~l~~~C------~~lp~~~~~~C~~~v~~y~~~ii~~l~~-----~~~p~~iC 71 (77)
T d1of9a_ 6 NLCTGLINTLENLLTTKG-ADKVKDYISSLC------NKASGFIATLCTKVLDFGIDKLIQLIED-----KVDANAIC 71 (77)
T ss_dssp HHHHHHHHHHHHHCSSSC-SHHHHHHHHHHH------TTCSSTTHHHHHHHHHHCHHHHHHHHHH-----TCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCc-HHHHHHHHHHHH------HHCChHHHHHhHHHHHHHHHHHHHHHHH-----cCCHHHHH
Confidence 368888888776655444 356777777653 4554 67899999999999999887543 35565543
No 8
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=27.28 E-value=13 Score=23.27 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=15.9
Q ss_pred CchhHHHHHHHHHHHHc
Q 013794 126 EIPELGAIRDIFEKKYG 142 (436)
Q Consensus 126 DlPEL~~IR~~f~~KYG 142 (436)
.+.||.++-+.|..|||
T Consensus 14 tvaelaelvk~ledkfg 30 (30)
T d1zavu1 14 TVSELAELVKKLEDKFG 30 (30)
T ss_dssp BHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHhhcC
Confidence 78899999999999998
No 9
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.77 E-value=9.2 Score=27.59 Aligned_cols=27 Identities=26% Similarity=0.572 Sum_probs=22.9
Q ss_pred HhhCCCCCCchhHHHHHHHHHHHHcHH
Q 013794 118 IFAAPRCSEIPELGAIRDIFEKKYGKD 144 (436)
Q Consensus 118 IfAApR~sDlPEL~~IR~~f~~KYGke 144 (436)
+|-||+|+-.+.+..+=+.|...|+..
T Consensus 7 ~F~a~wC~~C~~~~p~~~~l~~~~~~~ 33 (85)
T d1nhoa_ 7 VFTSPTCPYCPMAIEVVDEAKKEFGDK 33 (85)
T ss_dssp EESCSSSCCSTTHHHHHHHHHHHHCSS
T ss_pred EEECCCCcchHHHHHHHhhhccccccc
Confidence 588999999999998888888888753
No 10
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=18.77 E-value=1.2e+02 Score=21.95 Aligned_cols=23 Identities=17% Similarity=0.371 Sum_probs=15.3
Q ss_pred hhHHHHHHHHHhhCCCCCCchhH
Q 013794 108 ADLKEGIASVIFAAPRCSEIPEL 130 (436)
Q Consensus 108 ~eLkEAVsSLIfAApR~sDlPEL 130 (436)
.+++.+|=+|||||.+==.+.+|
T Consensus 6 ~~l~~~IEAlLFas~~Pls~~~L 28 (85)
T d1t6sa1 6 QQLLRSLEALIFSSEEPVNLQTL 28 (85)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCHHHH
Confidence 35777888899998872144443
Done!