Query 013797
Match_columns 436
No_of_seqs 325 out of 2935
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 17:18:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013797.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013797hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.8E-41 6.2E-46 323.9 34.7 268 141-434 24-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2.9E-41 1E-45 321.4 33.8 270 142-435 16-299 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 2.7E-41 9.3E-46 322.2 33.0 269 142-434 12-293 (306)
4 2vpj_A Kelch-like protein 12; 100.0 9.9E-41 3.4E-45 317.4 32.3 269 142-436 15-301 (301)
5 4asc_A Kelch repeat and BTB do 100.0 9.4E-40 3.2E-44 313.0 27.7 269 143-435 6-297 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.6E-39 8.9E-44 310.3 28.8 267 143-435 17-307 (318)
7 2xn4_A Kelch-like protein 2; s 100.0 9.7E-36 3.3E-40 283.2 29.2 230 183-434 11-250 (302)
8 3ii7_A Kelch-like protein 7; p 100.0 8.1E-36 2.8E-40 284.3 28.3 227 187-435 11-247 (306)
9 1zgk_A Kelch-like ECH-associat 100.0 8.2E-36 2.8E-40 284.7 27.8 232 183-434 20-261 (308)
10 2uvk_A YJHT; unknown function, 100.0 9.8E-36 3.3E-40 289.9 26.8 259 141-418 19-349 (357)
11 2uvk_A YJHT; unknown function, 100.0 2.6E-35 9E-40 286.9 28.5 248 166-434 2-315 (357)
12 2vpj_A Kelch-like protein 12; 100.0 1.4E-34 4.9E-39 274.9 30.3 228 185-434 12-252 (301)
13 4asc_A Kelch repeat and BTB do 100.0 1E-34 3.6E-39 277.9 24.6 219 153-390 68-306 (315)
14 2woz_A Kelch repeat and BTB do 100.0 1E-34 3.6E-39 278.3 23.6 230 140-388 55-314 (318)
15 2zwa_A Leucine carboxyl methyl 100.0 2.3E-30 7.8E-35 272.9 25.5 218 183-418 393-642 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 6.7E-30 2.3E-34 269.3 25.4 235 141-392 397-676 (695)
17 1k3i_A Galactose oxidase precu 100.0 6.8E-30 2.3E-34 268.4 19.5 258 153-434 167-518 (656)
18 1k3i_A Galactose oxidase precu 100.0 1.3E-27 4.3E-32 251.2 24.0 237 153-402 220-546 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.9 6.4E-07 2.2E-11 88.5 27.7 270 88-401 16-344 (445)
20 1p22_A F-BOX/WD-repeat protein 98.9 6.3E-08 2.1E-12 95.7 19.0 273 88-402 8-362 (435)
21 3v7d_B Cell division control p 98.8 5.6E-07 1.9E-11 89.3 20.8 45 88-132 12-57 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.7 8.3E-09 2.9E-13 70.0 2.8 43 90-132 8-50 (53)
23 3mbr_X Glutamine cyclotransfer 98.5 1.5E-05 5.3E-10 71.6 18.8 187 183-390 26-224 (243)
24 3nol_A Glutamine cyclotransfer 98.4 1.8E-05 6.2E-10 71.8 17.2 188 183-390 48-245 (262)
25 2e31_A FBS1, F-box only protei 98.4 1.6E-07 5.4E-12 86.8 3.3 50 87-136 47-97 (297)
26 3dsm_A Uncharacterized protein 98.2 0.00019 6.4E-09 67.9 21.9 234 142-406 54-301 (328)
27 3dsm_A Uncharacterized protein 98.2 0.00052 1.8E-08 64.8 24.3 220 151-407 16-253 (328)
28 3nok_A Glutaminyl cyclase; bet 98.0 0.00013 4.3E-09 66.3 14.1 187 183-390 60-255 (268)
29 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0079 2.7E-07 57.4 27.8 199 150-389 151-367 (376)
30 2iwa_A Glutamine cyclotransfer 97.9 0.00056 1.9E-08 62.5 17.2 190 183-391 26-227 (266)
31 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.02 6.8E-07 54.6 28.2 233 142-416 54-303 (376)
32 1rwi_B Serine/threonine-protei 97.8 0.0071 2.4E-07 54.5 22.3 220 144-402 37-261 (270)
33 3mbr_X Glutamine cyclotransfer 97.8 0.001 3.6E-08 59.6 16.0 119 218-356 15-135 (243)
34 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.015 5E-07 56.8 22.0 225 150-405 217-442 (445)
35 1q7f_A NHL, brain tumor CG1071 97.5 0.056 1.9E-06 49.0 26.1 229 144-403 43-278 (286)
36 3vgz_A Uncharacterized protein 97.5 0.044 1.5E-06 51.0 24.2 210 151-391 68-293 (353)
37 2z2n_A Virginiamycin B lyase; 97.5 0.031 1.1E-06 50.7 22.5 210 144-389 70-284 (299)
38 3hfq_A Uncharacterized protein 97.4 0.0017 5.9E-08 61.2 13.5 227 153-404 19-270 (347)
39 3vgz_A Uncharacterized protein 97.3 0.072 2.5E-06 49.5 23.8 219 142-390 101-334 (353)
40 1ri6_A Putative isomerase YBHE 97.3 0.042 1.5E-06 50.8 21.2 244 142-418 50-317 (343)
41 3jrp_A Fusion protein of prote 97.3 0.012 4.2E-07 55.4 17.4 235 150-418 31-295 (379)
42 1l0q_A Surface layer protein; 97.3 0.0031 1.1E-07 60.2 13.3 183 144-359 4-194 (391)
43 1l0q_A Surface layer protein; 97.2 0.0056 1.9E-07 58.5 14.3 219 141-401 43-271 (391)
44 2z2n_A Virginiamycin B lyase; 97.2 0.12 4.2E-06 46.6 22.6 211 143-388 27-242 (299)
45 3nol_A Glutamine cyclotransfer 97.1 0.0032 1.1E-07 57.0 10.9 121 216-356 35-157 (262)
46 2qc5_A Streptogramin B lactona 97.1 0.13 4.6E-06 46.4 21.9 213 142-389 31-248 (300)
47 4ery_A WD repeat-containing pr 97.0 0.095 3.3E-06 48.1 20.6 215 150-401 43-264 (312)
48 2qc5_A Streptogramin B lactona 97.0 0.15 5.2E-06 46.0 21.5 209 144-388 75-289 (300)
49 2iwa_A Glutamine cyclotransfer 97.0 0.018 6E-07 52.5 14.4 113 225-356 24-137 (266)
50 3scy_A Hypothetical bacterial 97.0 0.053 1.8E-06 51.0 18.6 226 153-405 30-291 (361)
51 3l2o_B F-box only protein 4; s 96.9 0.00025 8.6E-09 64.8 1.5 46 91-136 5-50 (312)
52 3v9f_A Two-component system se 96.9 0.15 5.2E-06 53.8 23.3 208 152-388 383-600 (781)
53 2p4o_A Hypothetical protein; p 96.9 0.1 3.4E-06 48.2 19.5 215 144-390 45-278 (306)
54 4a2l_A BT_4663, two-component 96.9 0.1 3.5E-06 55.3 21.7 210 152-391 427-650 (795)
55 3u4y_A Uncharacterized protein 96.8 0.026 9E-07 52.3 15.1 233 141-401 51-300 (331)
56 3nok_A Glutaminyl cyclase; bet 96.8 0.02 6.9E-07 51.8 13.5 115 219-356 50-166 (268)
57 3v9f_A Two-component system se 96.8 0.047 1.6E-06 57.7 18.8 210 152-391 427-647 (781)
58 3hfq_A Uncharacterized protein 96.8 0.024 8.1E-07 53.1 14.4 190 200-405 18-218 (347)
59 1rwi_B Serine/threonine-protei 96.7 0.064 2.2E-06 48.0 16.6 180 144-354 80-264 (270)
60 3scy_A Hypothetical bacterial 96.7 0.2 6.9E-06 46.9 20.6 113 280-408 221-340 (361)
61 4a2l_A BT_4663, two-component 96.7 0.2 6.8E-06 53.0 22.5 187 152-362 377-579 (795)
62 3bws_A Protein LP49; two-domai 96.7 0.048 1.6E-06 52.6 16.3 150 190-359 91-248 (433)
63 3jrp_A Fusion protein of prote 96.6 0.12 4.2E-06 48.3 18.5 190 187-403 22-238 (379)
64 1k8k_C P40, ARP2/3 complex 41 96.6 0.15 5E-06 47.7 18.9 224 145-402 23-271 (372)
65 3no2_A Uncharacterized protein 96.6 0.17 5.9E-06 46.0 18.5 237 143-418 6-261 (276)
66 1k8k_C P40, ARP2/3 complex 41 96.6 0.23 8E-06 46.3 20.0 188 150-363 72-285 (372)
67 2ast_B S-phase kinase-associat 96.5 0.00082 2.8E-08 63.4 2.4 43 89-131 7-49 (336)
68 1p22_A F-BOX/WD-repeat protein 96.5 0.077 2.6E-06 51.5 16.7 182 184-401 139-321 (435)
69 3fvz_A Peptidyl-glycine alpha- 96.5 0.53 1.8E-05 43.7 21.8 177 200-392 69-261 (329)
70 1gxr_A ESG1, transducin-like e 96.5 0.094 3.2E-06 48.2 16.3 180 187-401 108-292 (337)
71 3u4y_A Uncharacterized protein 96.5 0.047 1.6E-06 50.5 14.1 189 141-357 9-210 (331)
72 1q7f_A NHL, brain tumor CG1071 96.4 0.42 1.4E-05 43.0 20.2 181 186-391 39-227 (286)
73 1kb0_A Quinohemoprotein alcoho 96.4 1.1 3.8E-05 46.4 25.3 208 142-356 78-348 (677)
74 1ri6_A Putative isomerase YBHE 96.4 0.15 5E-06 47.0 17.0 193 144-359 7-216 (343)
75 3bws_A Protein LP49; two-domai 96.4 0.096 3.3E-06 50.4 16.3 197 142-358 134-338 (433)
76 1npe_A Nidogen, entactin; glyc 96.4 0.5 1.7E-05 42.2 21.6 189 141-358 47-242 (267)
77 1nir_A Nitrite reductase; hemo 96.4 0.13 4.3E-06 52.0 17.6 241 143-419 150-415 (543)
78 1pjx_A Dfpase, DIISOPROPYLFLUO 96.3 0.15 5.2E-06 46.5 16.7 189 150-356 44-258 (314)
79 1w6s_A Methanol dehydrogenase 96.3 0.82 2.8E-05 46.6 23.2 120 183-313 58-200 (599)
80 4gqb_B Methylosome protein 50; 96.3 0.15 5E-06 48.1 16.5 182 187-402 138-328 (344)
81 3g4e_A Regucalcin; six bladed 96.3 0.31 1E-05 44.6 18.3 221 142-391 25-263 (297)
82 1ijq_A LDL receptor, low-densi 96.3 0.72 2.5E-05 42.7 22.0 186 142-356 42-240 (316)
83 3v7d_B Cell division control p 96.3 0.9 3.1E-05 44.0 22.7 174 187-391 279-453 (464)
84 4g56_B MGC81050 protein; prote 96.2 0.051 1.8E-06 51.5 13.0 181 187-401 150-339 (357)
85 2ojh_A Uncharacterized protein 96.2 0.15 5.2E-06 45.5 15.7 187 151-362 61-266 (297)
86 1kb0_A Quinohemoprotein alcoho 96.2 1.2 4.1E-05 46.1 24.3 119 183-313 73-208 (677)
87 3azo_A Aminopeptidase; POP fam 96.2 0.89 3E-05 46.5 23.3 240 151-405 101-367 (662)
88 3no2_A Uncharacterized protein 96.2 0.41 1.4E-05 43.5 18.4 193 187-417 4-203 (276)
89 2ad6_A Methanol dehydrogenase 96.2 1.3 4.5E-05 44.8 25.2 119 183-312 58-193 (571)
90 3jro_A Fusion protein of prote 96.2 0.12 4.2E-06 54.3 16.8 222 150-401 29-281 (753)
91 2pm7_B Protein transport prote 96.1 0.72 2.5E-05 41.9 20.0 199 188-419 67-294 (297)
92 3v65_B Low-density lipoprotein 96.1 1 3.5E-05 43.0 23.0 202 151-389 95-306 (386)
93 3ow8_A WD repeat-containing pr 96.0 0.48 1.6E-05 43.8 18.6 213 150-401 100-317 (321)
94 2hqs_A Protein TOLB; TOLB, PAL 96.0 0.34 1.2E-05 46.8 18.2 183 152-361 203-394 (415)
95 3m0c_C LDL receptor, low-densi 96.0 1.3 4.4E-05 46.7 23.6 173 187-390 435-621 (791)
96 4aez_A CDC20, WD repeat-contai 96.0 0.4 1.4E-05 45.7 18.4 179 150-358 111-297 (401)
97 2hqs_A Protein TOLB; TOLB, PAL 96.0 0.29 9.9E-06 47.3 17.5 219 152-406 159-386 (415)
98 2vdu_B TRNA (guanine-N(7)-)-me 96.0 0.93 3.2E-05 43.9 21.3 201 187-408 160-394 (450)
99 2dg1_A DRP35, lactonase; beta 96.0 0.43 1.5E-05 44.0 18.0 241 143-406 57-315 (333)
100 1ijq_A LDL receptor, low-densi 96.0 0.99 3.4E-05 41.7 23.6 201 151-389 9-226 (316)
101 3e5z_A Putative gluconolactona 96.0 0.86 2.9E-05 41.2 19.8 223 144-408 42-287 (296)
102 1gxr_A ESG1, transducin-like e 96.0 0.35 1.2E-05 44.2 17.2 214 149-401 116-333 (337)
103 2aq5_A Coronin-1A; WD40 repeat 95.9 0.44 1.5E-05 45.4 18.1 148 187-355 93-255 (402)
104 3fm0_A Protein CIAO1; WDR39,SG 95.9 1 3.4E-05 42.0 20.2 180 150-352 36-223 (345)
105 3fvz_A Peptidyl-glycine alpha- 95.8 1.2 4E-05 41.2 25.4 221 152-401 69-318 (329)
106 1r5m_A SIR4-interacting protei 95.8 0.25 8.7E-06 46.8 15.9 143 185-356 215-363 (425)
107 2ad6_A Methanol dehydrogenase 95.8 1.9 6.6E-05 43.6 26.3 212 142-359 63-342 (571)
108 3p5b_L Low density lipoprotein 95.8 1.5 5E-05 42.2 22.3 201 151-388 91-307 (400)
109 3v65_B Low-density lipoprotein 95.7 1.5 5.2E-05 41.8 21.3 183 142-355 128-319 (386)
110 3dwl_C Actin-related protein 2 95.7 0.15 5.2E-06 47.9 13.7 221 150-391 31-272 (377)
111 3ow8_A WD repeat-containing pr 95.6 0.99 3.4E-05 41.6 18.9 179 187-401 91-275 (321)
112 2pm7_B Protein transport prote 95.6 1.3 4.4E-05 40.2 19.2 188 187-403 20-236 (297)
113 3vl1_A 26S proteasome regulato 95.5 0.73 2.5E-05 43.8 17.9 149 186-356 107-280 (420)
114 1w6s_A Methanol dehydrogenase 95.5 2.5 8.7E-05 43.0 24.4 212 142-359 63-349 (599)
115 3mkq_A Coatomer beta'-subunit; 95.5 0.56 1.9E-05 49.2 18.5 178 150-356 33-219 (814)
116 2p1m_B Transport inhibitor res 95.5 0.0033 1.1E-07 64.2 1.2 37 88-124 3-40 (594)
117 1yiq_A Quinohemoprotein alcoho 95.5 2.8 9.6E-05 43.4 24.7 118 183-312 66-200 (689)
118 4ery_A WD repeat-containing pr 95.5 1.1 3.7E-05 40.7 18.4 179 148-356 83-270 (312)
119 2hes_X YDR267CP; beta-propelle 95.5 1.3 4.4E-05 41.0 19.0 223 150-401 32-276 (330)
120 3jro_A Fusion protein of prote 95.4 0.092 3.1E-06 55.3 12.1 190 187-403 20-236 (753)
121 2fp8_A Strictosidine synthase; 95.4 0.2 6.7E-06 46.5 13.0 194 143-355 93-314 (322)
122 1jmx_B Amine dehydrogenase; ox 95.4 0.43 1.5E-05 43.9 15.4 155 142-310 11-179 (349)
123 3vl1_A 26S proteasome regulato 95.4 1.9 6.6E-05 40.8 22.5 219 146-402 113-362 (420)
124 2z3z_A Dipeptidyl aminopeptida 95.3 1.8 6.1E-05 44.6 21.5 148 200-361 235-398 (706)
125 3fm0_A Protein CIAO1; WDR39,SG 95.3 0.24 8.3E-06 46.3 13.5 187 187-401 27-221 (345)
126 3dwl_C Actin-related protein 2 95.3 0.053 1.8E-06 51.2 8.8 149 187-355 22-178 (377)
127 3p5b_L Low density lipoprotein 95.2 2.2 7.4E-05 41.0 20.3 146 186-355 169-321 (400)
128 1got_B GT-beta; complex (GTP-b 95.2 1.9 6.5E-05 39.9 19.8 181 186-401 153-339 (340)
129 3v64_C Agrin; beta propeller, 95.2 2.1 7.1E-05 40.2 24.8 201 151-390 52-264 (349)
130 1vyh_C Platelet-activating fac 95.1 2 6.8E-05 41.1 19.8 219 150-401 128-365 (410)
131 3c5m_A Oligogalacturonate lyas 95.1 1.4 4.8E-05 41.2 18.5 146 200-361 168-336 (396)
132 1qks_A Cytochrome CD1 nitrite 95.1 0.79 2.7E-05 46.4 17.2 244 142-419 167-434 (567)
133 4h5i_A Guanine nucleotide-exch 95.0 1.7 5.8E-05 40.9 18.7 208 186-418 143-356 (365)
134 4aez_A CDC20, WD repeat-contai 95.0 0.89 3E-05 43.3 16.7 134 199-356 112-250 (401)
135 2dg1_A DRP35, lactonase; beta 95.0 0.17 5.6E-06 46.9 11.1 155 186-354 54-213 (333)
136 3v64_C Agrin; beta propeller, 95.0 2.4 8.3E-05 39.7 23.3 183 142-355 85-276 (349)
137 1nir_A Nitrite reductase; hemo 95.0 0.5 1.7E-05 47.6 15.3 161 187-365 237-418 (543)
138 1kv9_A Type II quinohemoprotei 94.9 4.1 0.00014 42.0 25.0 208 142-356 67-335 (668)
139 2pm9_A Protein WEB1, protein t 94.9 1.6 5.6E-05 41.1 18.3 147 188-355 178-338 (416)
140 1got_B GT-beta; complex (GTP-b 94.8 1.2 4.2E-05 41.2 16.9 215 150-401 75-297 (340)
141 2ojh_A Uncharacterized protein 94.8 1.1 3.8E-05 39.7 16.1 154 187-361 9-169 (297)
142 3bg1_A Protein SEC13 homolog; 94.8 0.62 2.1E-05 42.8 14.6 234 150-420 33-303 (316)
143 1pjx_A Dfpase, DIISOPROPYLFLUO 94.8 0.42 1.4E-05 43.5 13.3 187 143-355 84-300 (314)
144 3e5z_A Putative gluconolactona 94.7 1.7 5.7E-05 39.2 17.1 183 144-357 82-289 (296)
145 1npe_A Nidogen, entactin; glyc 94.7 2.2 7.5E-05 37.9 22.1 175 187-390 47-227 (267)
146 4gga_A P55CDC, cell division c 94.6 0.73 2.5E-05 44.2 15.2 140 190-355 118-262 (420)
147 1r5m_A SIR4-interacting protei 94.6 2.8 9.5E-05 39.4 19.2 181 187-402 160-358 (425)
148 3g4e_A Regucalcin; six bladed 94.6 0.51 1.7E-05 43.1 13.3 148 187-357 24-185 (297)
149 2hes_X YDR267CP; beta-propelle 94.6 0.28 9.6E-06 45.5 11.7 192 187-401 118-324 (330)
150 1n7d_A LDL receptor, low-densi 94.6 0.86 2.9E-05 47.5 16.3 148 186-357 463-617 (699)
151 2ghs_A AGR_C_1268P; regucalcin 94.6 2.8 9.5E-05 38.7 18.5 216 142-391 61-293 (326)
152 3m0c_C LDL receptor, low-densi 94.5 3.4 0.00012 43.5 20.9 146 186-355 481-633 (791)
153 3ei3_B DNA damage-binding prot 94.5 1.4 4.9E-05 41.3 16.7 143 189-354 87-236 (383)
154 1yiq_A Quinohemoprotein alcoho 94.5 5.2 0.00018 41.4 26.0 208 142-356 71-340 (689)
155 1pby_B Quinohemoprotein amine 94.5 1.6 5.4E-05 39.7 16.5 109 142-262 46-167 (337)
156 1flg_A Protein (quinoprotein e 94.5 4.7 0.00016 40.8 22.6 117 183-311 64-200 (582)
157 4aow_A Guanine nucleotide-bind 94.3 2.3 7.9E-05 38.7 17.3 132 250-401 196-333 (340)
158 3hrp_A Uncharacterized protein 94.3 3.4 0.00012 39.7 18.9 151 186-355 140-299 (409)
159 3hrp_A Uncharacterized protein 94.2 4.2 0.00014 39.0 25.9 198 143-361 143-361 (409)
160 1sq9_A Antiviral protein SKI8; 94.1 3.2 0.00011 38.8 18.4 115 231-356 197-324 (397)
161 2fp8_A Strictosidine synthase; 94.1 2.6 9E-05 38.6 17.3 188 187-401 91-309 (322)
162 2ynn_A Coatomer subunit beta'; 94.1 3.3 0.00011 37.5 18.7 212 150-401 33-255 (304)
163 3i2n_A WD repeat-containing pr 94.1 1.9 6.6E-05 39.5 16.3 175 151-354 43-243 (357)
164 3zwl_B Eukaryotic translation 94.0 2.8 9.7E-05 38.4 17.4 185 150-359 52-254 (369)
165 2p4o_A Hypothetical protein; p 94.0 3.6 0.00012 37.5 19.3 153 186-354 41-198 (306)
166 4g56_B MGC81050 protein; prote 93.9 0.67 2.3E-05 43.6 12.9 146 187-356 105-260 (357)
167 3i2n_A WD repeat-containing pr 93.9 2.2 7.4E-05 39.1 16.3 151 189-358 32-203 (357)
168 4e54_B DNA damage-binding prot 93.8 0.66 2.3E-05 44.8 13.0 185 144-355 134-328 (435)
169 1vyh_C Platelet-activating fac 93.8 1.9 6.5E-05 41.2 16.1 145 187-359 119-270 (410)
170 2pbi_B Guanine nucleotide-bind 93.7 4.4 0.00015 37.7 20.2 171 199-401 175-353 (354)
171 3azo_A Aminopeptidase; POP fam 93.7 2.3 7.9E-05 43.3 17.5 186 152-361 161-376 (662)
172 1erj_A Transcriptional repress 93.7 3.1 0.00011 39.4 17.3 221 150-402 143-386 (393)
173 1n7d_A LDL receptor, low-densi 93.6 1.1 3.9E-05 46.5 15.0 203 151-390 385-603 (699)
174 3bg1_A Protein SEC13 homolog; 93.6 0.6 2.1E-05 42.9 11.8 162 187-363 24-208 (316)
175 2ghs_A AGR_C_1268P; regucalcin 93.5 0.98 3.3E-05 41.9 13.0 143 187-353 60-209 (326)
176 4a11_B DNA excision repair pro 93.5 2.9 0.0001 39.0 16.7 153 187-356 111-278 (408)
177 1kv9_A Type II quinohemoprotei 93.5 7.8 0.00027 39.9 25.5 118 183-312 62-195 (668)
178 3iz6_a 40S ribosomal protein R 93.5 5.1 0.00017 37.6 19.3 180 199-401 179-371 (380)
179 3pe7_A Oligogalacturonate lyas 93.4 1.5 5E-05 41.2 14.3 158 200-361 168-336 (388)
180 3k26_A Polycomb protein EED; W 93.3 4.8 0.00016 36.8 18.0 102 145-260 88-194 (366)
181 4e54_B DNA damage-binding prot 93.3 0.52 1.8E-05 45.6 11.1 144 188-355 132-283 (435)
182 4gqb_B Methylosome protein 50; 93.3 2.4 8.1E-05 39.6 15.4 136 199-355 102-247 (344)
183 2pbi_B Guanine nucleotide-bind 93.2 3.8 0.00013 38.1 16.8 216 150-401 84-311 (354)
184 3k26_A Polycomb protein EED; W 93.1 5 0.00017 36.6 19.2 104 188-308 85-194 (366)
185 1jmx_B Amine dehydrogenase; ox 93.1 2.4 8.2E-05 38.7 15.1 109 142-261 55-178 (349)
186 2ynn_A Coatomer subunit beta'; 93.1 1.7 6E-05 39.4 14.0 177 150-358 75-263 (304)
187 1qhu_A Protein (hemopexin); be 93.1 7 0.00024 38.2 18.8 192 187-418 158-395 (460)
188 1yfq_A Cell cycle arrest prote 93.1 5 0.00017 36.4 18.7 146 187-355 67-226 (342)
189 1flg_A Protein (quinoprotein e 93.0 8.5 0.00029 38.9 24.5 116 142-263 69-200 (582)
190 1qhu_A Protein (hemopexin); be 92.9 7.5 0.00026 38.0 22.3 177 143-354 160-385 (460)
191 3dr2_A Exported gluconolactona 92.9 4.3 0.00015 36.8 16.3 217 144-388 59-295 (305)
192 3mkq_A Coatomer beta'-subunit; 92.7 1.3 4.3E-05 46.5 13.9 180 150-357 75-262 (814)
193 2hz6_A Endoplasmic reticulum t 92.7 0.078 2.7E-06 50.6 4.1 143 183-359 5-156 (369)
194 2pm9_A Protein WEB1, protein t 92.6 6.8 0.00023 36.7 19.8 150 187-355 78-250 (416)
195 3ott_A Two-component system se 92.5 5.8 0.0002 41.4 18.6 182 152-361 392-593 (758)
196 1pby_B Quinohemoprotein amine 92.5 0.99 3.4E-05 41.1 11.4 149 147-310 6-167 (337)
197 3lrv_A PRE-mRNA-splicing facto 92.5 6.5 0.00022 36.1 18.8 180 187-388 138-330 (343)
198 3ei3_B DNA damage-binding prot 92.5 5.3 0.00018 37.2 16.8 182 145-355 89-283 (383)
199 4a11_B DNA excision repair pro 92.4 6.8 0.00023 36.4 18.3 224 150-402 120-362 (408)
200 1pex_A Collagenase-3, MMP-13; 92.4 5 0.00017 34.6 18.9 148 182-357 28-195 (207)
201 1erj_A Transcriptional repress 92.3 2.8 9.7E-05 39.6 14.7 104 231-357 134-241 (393)
202 3ogk_B Coronatine-insensitive 92.3 0.038 1.3E-06 56.2 1.4 33 92-124 14-47 (592)
203 3zwl_B Eukaryotic translation 92.2 3.1 0.00011 38.1 14.7 154 187-354 43-206 (369)
204 3c5m_A Oligogalacturonate lyas 92.0 2.3 7.8E-05 39.7 13.6 197 151-361 167-391 (396)
205 1pgu_A Actin interacting prote 92.0 11 0.00036 37.5 21.1 139 232-402 456-611 (615)
206 4ggc_A P55CDC, cell division c 92.0 4.3 0.00015 36.4 15.0 144 187-355 36-182 (318)
207 1itv_A MMP9; adaptive molecula 91.8 5.5 0.00019 33.9 15.2 146 182-356 11-176 (195)
208 3dr2_A Exported gluconolactona 91.7 3.3 0.00011 37.6 14.0 183 143-352 98-304 (305)
209 1pgu_A Actin interacting prote 91.5 8.3 0.00028 38.3 17.9 107 234-359 175-288 (615)
210 1sq9_A Antiviral protein SKI8; 91.4 8.9 0.0003 35.6 19.0 150 189-356 82-269 (397)
211 2ecf_A Dipeptidyl peptidase IV 91.4 11 0.00038 38.7 19.2 99 153-265 65-188 (741)
212 1qks_A Cytochrome CD1 nitrite 91.2 7.7 0.00026 39.1 17.0 162 187-365 255-437 (567)
213 3odt_A Protein DOA1; ubiquitin 91.0 8 0.00027 34.3 19.8 137 231-401 154-292 (313)
214 3lrv_A PRE-mRNA-splicing facto 91.0 9.3 0.00032 35.0 22.2 185 144-355 50-245 (343)
215 3hxj_A Pyrrolo-quinoline quino 91.0 8.7 0.0003 34.7 17.5 165 151-359 116-290 (330)
216 3iz6_a 40S ribosomal protein R 90.7 11 0.00037 35.3 19.6 188 147-355 175-376 (380)
217 4aow_A Guanine nucleotide-bind 90.6 4.5 0.00016 36.6 13.8 149 189-356 186-339 (340)
218 3hxj_A Pyrrolo-quinoline quino 90.4 3.2 0.00011 37.7 12.5 137 186-360 69-211 (330)
219 2z3z_A Dipeptidyl aminopeptida 90.1 18 0.00062 36.9 22.5 110 249-361 235-351 (706)
220 3tc9_A Hypothetical hydrolase; 90.1 2.7 9.2E-05 40.8 12.1 144 186-353 148-300 (430)
221 4gga_A P55CDC, cell division c 90.1 13 0.00044 35.2 19.8 181 151-359 124-315 (420)
222 3mmy_A MRNA export factor; mRN 90.1 7.9 0.00027 35.3 15.1 142 187-355 97-248 (368)
223 3sfz_A APAF-1, apoptotic pepti 90.0 3.1 0.0001 46.0 14.0 182 187-401 972-1154(1249)
224 3dm0_A Maltose-binding peripla 89.9 14 0.00048 37.8 18.2 146 187-357 483-635 (694)
225 3b7f_A Glycosyl hydrolase, BNR 89.8 14 0.00046 34.9 18.9 159 187-361 22-215 (394)
226 3oyo_A Hemopexin fold protein 89.7 3 0.0001 36.5 10.9 146 186-354 12-198 (225)
227 3odt_A Protein DOA1; ubiquitin 89.2 11 0.00039 33.3 18.9 176 150-356 37-216 (313)
228 1yfq_A Cell cycle arrest prote 89.0 13 0.00043 33.6 15.9 186 187-405 22-225 (342)
229 3pe7_A Oligogalacturonate lyas 89.0 13 0.00043 34.5 15.8 211 140-364 46-283 (388)
230 3ott_A Two-component system se 89.0 6.5 0.00022 41.0 14.9 138 187-354 482-626 (758)
231 3sov_A LRP-6, low-density lipo 88.6 15 0.0005 33.8 22.5 145 186-356 89-240 (318)
232 1su3_A Interstitial collagenas 88.5 9.1 0.00031 37.3 14.5 150 182-359 267-437 (450)
233 3sfz_A APAF-1, apoptotic pepti 88.2 4.2 0.00014 44.9 13.5 177 151-356 982-1160(1249)
234 4a0p_A LRP6, LRP-6, low-densit 88.2 25 0.00084 35.9 21.8 181 142-355 49-238 (628)
235 2vdu_B TRNA (guanine-N(7)-)-me 88.0 19 0.00065 34.4 20.1 150 188-359 210-398 (450)
236 2ecf_A Dipeptidyl peptidase IV 87.5 28 0.00094 35.7 20.3 107 250-361 264-375 (741)
237 2aq5_A Coronin-1A; WD40 repeat 87.2 19 0.00066 33.6 21.0 141 199-358 56-211 (402)
238 2xdw_A Prolyl endopeptidase; a 87.0 30 0.001 35.5 21.1 190 153-360 152-375 (710)
239 2xyi_A Probable histone-bindin 86.8 13 0.00043 35.5 14.5 141 190-354 196-353 (430)
240 4h5i_A Guanine nucleotide-exch 86.7 20 0.00068 33.3 17.7 179 151-354 156-343 (365)
241 3c7x_A Matrix metalloproteinas 86.6 14 0.00047 31.5 12.9 145 183-356 11-177 (196)
242 3f3f_A Nucleoporin SEH1; struc 86.6 17 0.00059 32.4 21.9 148 188-355 71-250 (351)
243 3c75_H MADH, methylamine dehyd 86.5 7.6 0.00026 37.6 12.6 108 142-261 85-212 (426)
244 3lp9_A LS-24; SEED albumin, pl 86.4 2.6 8.9E-05 37.0 8.4 144 186-355 14-202 (227)
245 1itv_A MMP9; adaptive molecula 86.3 11 0.00037 32.1 12.1 136 226-391 11-166 (195)
246 2p9w_A MAL S 1 allergenic prot 86.3 21 0.00072 33.1 20.2 232 143-391 26-305 (334)
247 3f3f_A Nucleoporin SEH1; struc 85.8 19 0.00064 32.1 21.0 194 187-404 22-248 (351)
248 2xyi_A Probable histone-bindin 85.6 4.9 0.00017 38.5 10.8 63 280-354 243-309 (430)
249 3b7f_A Glycosyl hydrolase, BNR 85.3 25 0.00085 33.1 23.3 190 152-362 31-270 (394)
250 2xdw_A Prolyl endopeptidase; a 85.1 16 0.00054 37.6 15.1 145 199-361 258-423 (710)
251 3frx_A Guanine nucleotide-bind 84.5 23 0.00078 32.0 16.1 215 150-401 85-313 (319)
252 2oiz_A Aromatic amine dehydrog 84.3 26 0.0009 32.5 16.1 97 152-260 31-142 (361)
253 3sov_A LRP-6, low-density lipo 84.2 25 0.00085 32.2 21.5 169 187-388 46-225 (318)
254 2bkl_A Prolyl endopeptidase; m 83.8 41 0.0014 34.3 20.6 191 152-360 147-357 (695)
255 3o4h_A Acylamino-acid-releasin 83.6 6.1 0.00021 39.5 10.9 188 187-405 121-313 (582)
256 2xbg_A YCF48-like protein; pho 83.6 27 0.00091 32.0 17.4 197 161-390 108-312 (327)
257 3iuj_A Prolyl endopeptidase; h 83.2 17 0.00059 37.3 14.3 143 200-363 259-414 (693)
258 3tc9_A Hypothetical hydrolase; 83.1 6 0.00021 38.2 10.2 145 231-405 149-301 (430)
259 4hw6_A Hypothetical protein, I 82.5 13 0.00045 35.8 12.4 143 187-353 152-303 (433)
260 2bkl_A Prolyl endopeptidase; m 82.4 9.1 0.00031 39.4 11.8 160 187-362 237-405 (695)
261 3dm0_A Maltose-binding peripla 82.3 42 0.0014 34.1 16.9 145 187-356 441-594 (694)
262 2ymu_A WD-40 repeat protein; u 81.7 39 0.0013 33.1 16.0 172 187-391 396-570 (577)
263 1hxn_A Hemopexin, HPX; heme, b 81.6 25 0.00087 30.4 13.5 135 186-354 27-197 (219)
264 3mmy_A MRNA export factor; mRN 81.5 30 0.001 31.2 20.1 214 150-392 106-337 (368)
265 3gre_A Serine/threonine-protei 80.9 37 0.0013 31.9 15.9 154 187-356 181-361 (437)
266 1yr2_A Prolyl oligopeptidase; 80.6 18 0.00062 37.4 13.5 160 185-362 276-449 (741)
267 3gre_A Serine/threonine-protei 80.2 39 0.0013 31.7 16.2 103 231-356 181-294 (437)
268 4a0p_A LRP6, LRP-6, low-densit 80.0 55 0.0019 33.2 25.9 200 151-388 14-224 (628)
269 3o4h_A Acylamino-acid-releasin 79.1 46 0.0016 32.9 15.6 155 185-361 30-191 (582)
270 2ece_A 462AA long hypothetical 78.0 43 0.0015 32.5 14.0 164 187-361 95-296 (462)
271 3frx_A Guanine nucleotide-bind 77.7 24 0.00082 31.8 12.0 142 187-356 76-229 (319)
272 3c75_H MADH, methylamine dehyd 77.4 29 0.00098 33.4 12.7 69 280-356 330-404 (426)
273 3oyo_A Hemopexin fold protein 77.1 33 0.0011 29.7 12.0 63 334-406 127-197 (225)
274 1k32_A Tricorn protease; prote 76.9 30 0.001 37.5 14.2 141 199-361 316-468 (1045)
275 1gen_A Gelatinase A; hydrolase 75.2 40 0.0014 29.1 17.1 144 182-356 35-204 (218)
276 1hxn_A Hemopexin, HPX; heme, b 74.7 41 0.0014 29.0 14.1 134 230-391 27-189 (219)
277 1nr0_A Actin interacting prote 74.6 72 0.0025 31.8 17.8 150 187-359 201-360 (611)
278 2xe4_A Oligopeptidase B; hydro 74.4 72 0.0025 33.0 15.9 157 187-361 282-465 (751)
279 1xfd_A DIP, dipeptidyl aminope 74.2 79 0.0027 32.0 16.5 104 152-264 37-149 (723)
280 2xzm_R RACK1; ribosome, transl 74.1 51 0.0018 29.8 17.0 55 150-211 96-151 (343)
281 3ju4_A Endo-N-acetylneuraminid 74.1 61 0.0021 30.9 13.1 126 209-342 269-405 (670)
282 2xbg_A YCF48-like protein; pho 74.0 52 0.0018 29.9 20.8 173 209-418 24-200 (327)
283 1k32_A Tricorn protease; prote 72.8 1.1E+02 0.0037 33.0 17.7 179 151-361 225-416 (1045)
284 1nr0_A Actin interacting prote 72.6 81 0.0028 31.5 17.9 145 190-356 162-315 (611)
285 1jof_A Carboxy-CIS,CIS-muconat 72.4 59 0.002 29.8 22.2 89 334-434 265-364 (365)
286 3sjl_D Methylamine dehydrogena 71.7 69 0.0024 30.3 17.2 59 152-213 109-173 (386)
287 2mad_H Methylamine dehydrogena 71.5 66 0.0023 30.0 24.8 75 137-213 73-160 (373)
288 3kya_A Putative phosphatase; s 71.3 81 0.0028 30.9 18.2 200 142-360 152-415 (496)
289 3s94_A LRP-6, low-density lipo 70.2 96 0.0033 31.3 24.9 172 187-389 360-539 (619)
290 1pex_A Collagenase-3, MMP-13; 70.1 51 0.0017 28.1 18.0 145 226-407 28-192 (207)
291 3qqz_A Putative uncharacterize 69.4 60 0.0021 28.7 12.2 107 280-404 38-150 (255)
292 2xzm_R RACK1; ribosome, transl 68.4 69 0.0023 28.9 17.8 103 231-354 87-203 (343)
293 1yr2_A Prolyl oligopeptidase; 67.3 67 0.0023 33.1 13.7 147 151-314 293-449 (741)
294 1jof_A Carboxy-CIS,CIS-muconat 66.6 78 0.0027 28.9 14.3 159 187-358 156-345 (365)
295 3ba0_A Macrophage metalloelast 66.5 85 0.0029 29.4 19.4 150 182-359 185-355 (365)
296 4hw6_A Hypothetical protein, I 66.1 94 0.0032 29.7 16.5 151 187-353 239-432 (433)
297 4ggc_A P55CDC, cell division c 65.6 70 0.0024 28.0 19.4 218 151-401 44-269 (318)
298 1ck7_A Protein (gelatinase A); 64.5 85 0.0029 31.9 13.1 145 182-355 448-616 (631)
299 2oiz_A Aromatic amine dehydrog 64.1 89 0.0031 28.7 15.6 73 280-363 265-343 (361)
300 2gop_A Trilobed protease; beta 63.7 78 0.0027 28.3 12.1 179 152-361 43-258 (347)
301 3lp9_A LS-24; SEED albumin, pl 62.5 37 0.0013 29.5 9.0 102 185-307 70-202 (227)
302 3iuj_A Prolyl endopeptidase; h 62.2 1.4E+02 0.0048 30.3 22.8 188 152-360 155-365 (693)
303 3s94_A LRP-6, low-density lipo 61.6 1.4E+02 0.0048 30.1 22.5 147 186-358 402-555 (619)
304 2cn3_A Xyloglucanase, beta-1,4 59.3 1.6E+02 0.0056 30.2 25.6 242 151-417 44-343 (737)
305 3amr_A 3-phytase; beta-propell 58.7 1.2E+02 0.004 28.3 13.0 137 249-401 99-259 (355)
306 3dw8_B Serine/threonine-protei 58.2 1.2E+02 0.004 28.2 14.7 27 334-360 353-379 (447)
307 3c7x_A Matrix metalloproteinas 57.7 85 0.0029 26.4 11.7 145 226-406 10-174 (196)
308 3sjl_D Methylamine dehydrogena 56.4 61 0.0021 30.7 9.9 73 231-311 291-368 (386)
309 3vu4_A KMHSV2; beta-propeller 53.7 1.3E+02 0.0045 27.3 23.6 178 146-355 75-272 (355)
310 3vu4_A KMHSV2; beta-propeller 53.6 1.3E+02 0.0045 27.3 19.1 182 187-402 70-268 (355)
311 2ymu_A WD-40 repeat protein; u 50.9 1.8E+02 0.0061 28.1 18.9 176 187-401 355-535 (577)
312 1xfd_A DIP, dipeptidyl aminope 50.1 1.3E+02 0.0045 30.3 12.2 107 200-313 37-150 (723)
313 2qe8_A Uncharacterized protein 49.4 1.5E+02 0.0051 26.8 16.0 123 231-360 27-161 (343)
314 2xe4_A Oligopeptidase B; hydro 48.3 2.5E+02 0.0084 28.9 14.4 146 151-313 294-465 (751)
315 3ju4_A Endo-N-acetylneuraminid 46.4 1.7E+02 0.0059 27.9 10.7 123 258-389 269-405 (670)
316 3sre_A PON1, serum paraoxonase 45.1 1.9E+02 0.0066 26.8 13.1 142 199-354 82-252 (355)
317 2qe8_A Uncharacterized protein 45.0 1.8E+02 0.006 26.3 11.5 105 280-389 27-139 (343)
318 2ece_A 462AA long hypothetical 44.6 2.3E+02 0.0077 27.5 16.4 56 334-389 331-400 (462)
319 1fwx_A Nitrous oxide reductase 43.7 70 0.0024 32.2 8.4 203 142-365 102-380 (595)
320 2kwv_A RAD30 homolog B, DNA po 42.9 17 0.00058 22.6 2.3 27 83-109 13-39 (48)
321 2gop_A Trilobed protease; beta 42.6 1.8E+02 0.0062 25.8 13.7 137 152-312 152-297 (347)
322 2hz6_A Endoplasmic reticulum t 40.7 34 0.0012 31.9 5.5 66 277-359 6-75 (369)
323 1su3_A Interstitial collagenas 38.7 2.7E+02 0.0094 26.7 16.4 132 226-391 267-424 (450)
324 3kya_A Putative phosphatase; s 38.5 2.9E+02 0.0099 27.0 13.4 107 231-353 151-277 (496)
325 3ba0_A Macrophage metalloelast 36.6 2.6E+02 0.009 25.9 13.4 102 187-311 236-355 (365)
326 2be1_A Serine/threonine-protei 35.8 31 0.0011 32.1 4.2 110 186-313 9-139 (339)
327 3dw8_B Serine/threonine-protei 34.8 2.6E+02 0.0088 25.7 10.9 21 336-356 240-260 (447)
328 3q6k_A 43.2 kDa salivary prote 34.4 1.8E+02 0.0061 27.4 9.3 81 280-361 97-198 (381)
329 1mda_H Methylamine dehydrogena 33.4 1.8E+02 0.0061 27.1 9.2 66 142-212 32-108 (368)
330 4hvt_A Ritya.17583.B, post-pro 32.5 4.3E+02 0.015 27.1 15.3 151 198-364 267-439 (711)
331 1fwx_A Nitrous oxide reductase 32.4 1.4E+02 0.0047 30.1 8.4 157 187-355 101-309 (595)
332 1gen_A Gelatinase A; hydrolase 30.6 2.5E+02 0.0086 23.9 13.1 99 275-391 35-145 (218)
333 3k6s_A Integrin alpha-X; cell 30.5 4.8E+02 0.016 28.4 13.0 133 224-363 336-491 (1095)
334 2oaj_A Protein SNI1; WD40 repe 30.4 5E+02 0.017 27.3 14.6 148 231-413 28-184 (902)
335 2oit_A Nucleoporin 214KDA; NH2 28.8 3.7E+02 0.013 25.2 12.4 159 188-359 162-340 (434)
336 4hvt_A Ritya.17583.B, post-pro 27.8 5.1E+02 0.017 26.5 12.6 146 152-316 269-439 (711)
337 2cn3_A Xyloglucanase, beta-1,4 26.8 5.3E+02 0.018 26.3 17.4 101 258-360 231-343 (737)
338 1sqj_A OXG-RCBH, oligoxylogluc 26.0 5.6E+02 0.019 26.4 22.2 225 163-421 5-279 (789)
339 2be1_A Serine/threonine-protei 24.7 33 0.0011 31.9 2.2 103 250-359 21-137 (339)
340 2mad_H Methylamine dehydrogena 24.2 4.2E+02 0.014 24.3 26.4 108 142-261 33-159 (373)
341 2ism_A Putative oxidoreductase 22.6 4.3E+02 0.015 23.9 11.6 116 280-407 41-178 (352)
342 3ei3_A DNA damage-binding prot 21.3 8.2E+02 0.028 26.7 16.7 185 200-406 807-1000(1158)
343 2j04_A TAU60, YPL007P, hypothe 21.2 6.3E+02 0.021 25.2 15.5 148 187-360 96-260 (588)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-41 Score=323.91 Aligned_cols=268 Identities=20% Similarity=0.278 Sum_probs=229.2
Q ss_pred CCeEEEecc----CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec----C---CCeEEEEECCC
Q 013797 141 EPSVFMLAS----GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI----E---GGVIWRYELET 209 (436)
Q Consensus 141 ~~~l~~~~~----~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~----~---~~~v~~ydp~t 209 (436)
...++++.+ ..+.+++||+.+++|..++++|.++..+ +++..++.||++||.. . .+.+++||+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL----AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC----EEEEETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc----eEEEECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 355677655 2368999999999999999999887644 3678899999999973 2 26899999999
Q ss_pred CCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEecc
Q 013797 210 NNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGR 289 (436)
Q Consensus 210 ~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~ 289 (436)
++|++++++|.+|..|++++++++||++||..... ..+++++||+.+++|+.++++|.+|..+++++++++||++||.
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI--HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE--ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc--ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCC
Confidence 99999999999999999999999999999987643 5788999999999999999999999999999999999999998
Q ss_pred CCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCC
Q 013797 290 NEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVP 364 (436)
Q Consensus 290 ~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p 364 (436)
+... ..+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|++++.+|
T Consensus 178 ~~~~-~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 178 DGTN-RLNSAECYYPERNEWRMITAMN------TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp CSSC-BCCCEEEEETTTTEEEECCCCS------SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS
T ss_pred CCCC-cCceEEEEeCCCCeEeeCCCCC------CccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC
Confidence 7665 5889999999999999999887 688999999999999999986 468999999999999998776
Q ss_pred CccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEe
Q 013797 365 VRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
.+ +..++++ .++++|||+||.+. ....++++| || ++++|++++ ++|.+|+.|+|++|
T Consensus 251 ~~---r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~y--d~----~~~~W~~~~--~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 251 HR---RSALGIT--VHQGRIYVLGGYDGHTFLDSVECY--DP----DTDTWSEVT--RMTSGRSGVGVAVT 308 (308)
T ss_dssp SC---CBSCEEE--EETTEEEEECCBCSSCBCCEEEEE--ET----TTTEEEEEE--ECSSCCBSCEEEEC
T ss_pred CC---ccceEEE--EECCEEEEEcCcCCCcccceEEEE--cC----CCCEEeecC--CCCCCcccceeEeC
Confidence 43 4455444 78999999999876 345566666 54 455999998 56899999999875
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=321.37 Aligned_cols=270 Identities=20% Similarity=0.333 Sum_probs=229.6
Q ss_pred CeEEEeccC----CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCC---CeEEEEECCCCCEEe
Q 013797 142 PSVFMLASG----DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEG---GVIWRYELETNNWFK 214 (436)
Q Consensus 142 ~~l~~~~~~----~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~---~~v~~ydp~t~~W~~ 214 (436)
..++++.+. ...+++||+.+++|..++++|.++..+ +++..++.||++||.... +++++||+.+++|++
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA----GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC----EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc----eEEEECCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 356666541 357899999999999999999876543 367889999999996543 689999999999999
Q ss_pred CCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCC-
Q 013797 215 GPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKD- 293 (436)
Q Consensus 215 l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~- 293 (436)
++++|.+|..|++++++++||++||..... .++++++||+.+++|+.++++|.+|..+++++++++||++||.+...
T Consensus 92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVLNGLLYAVGGFDGST--GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASR 169 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEEEEECSSC--EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTT
T ss_pred CCCCCccccceEEEEECCEEEEEcCCCCCc--cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCC
Confidence 999999999999999999999999987644 67899999999999999999999999999999999999999986543
Q ss_pred CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCCCccC
Q 013797 294 KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVPVRAD 368 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~~ 368 (436)
...+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|+.++.+|..
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-- 241 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMS------TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC-- 241 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC--
T ss_pred ccccEEEEEeCCCCcEEECCCCc------cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc--
Confidence 24788999999999999999887 688999999999999999985 46899999999999999877643
Q ss_pred CCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEee
Q 013797 369 FNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVMV 435 (436)
Q Consensus 369 ~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~~ 435 (436)
+..++++ .++++|||+||.+. ....++++| | +++++|+.++. ++|.+|+.|+++++.
T Consensus 242 -r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~y--d----~~~~~W~~~~~-~~~~~r~~~~~~~~~ 299 (302)
T 2xn4_A 242 -RRNAGVC--AVNGLLYVVGGDDGSCNLASVEYY--N----PTTDKWTVVSS-CMSTGRSYAGVTVID 299 (302)
T ss_dssp -CBSCEEE--EETTEEEEECCBCSSSBCCCEEEE--E----TTTTEEEECSS-CCSSCCBSCEEEEEE
T ss_pred -cccCeEE--EECCEEEEECCcCCCcccccEEEE--c----CCCCeEEECCc-ccCcccccceEEEec
Confidence 4454444 78999999999876 445677777 4 55559999973 468899999999874
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=322.18 Aligned_cols=269 Identities=16% Similarity=0.221 Sum_probs=228.4
Q ss_pred CeEEEeccC--CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec--CCCeEEEEECCCCCEEeCCC
Q 013797 142 PSVFMLASG--DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI--EGGVIWRYELETNNWFKGPS 217 (436)
Q Consensus 142 ~~l~~~~~~--~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~~~v~~ydp~t~~W~~l~~ 217 (436)
..++++.+. .+.+++||+.+++|..++++|.++..+ +++..++.||++||.. ..+++++||+.+++|+++++
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDA----ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSC----EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCccccee----EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 567777652 478999999999999999999876654 3778899999999975 23789999999999999999
Q ss_pred CCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCC---
Q 013797 218 MRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDK--- 294 (436)
Q Consensus 218 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~--- 294 (436)
+|.+|..|++++++++||++||.+.. ....+++++||+.+++|+.++++|.+|..|++++++++||++||......
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVG-NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTT-BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred CCccccceeEEEECCEEEEECCCCCC-CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 99999999999999999999998632 22678999999999999999999999999999999999999999866542
Q ss_pred cCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCCCccCC
Q 013797 295 PLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVPVRADF 369 (436)
Q Consensus 295 ~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~~~ 369 (436)
..+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|+.++.+|..
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--- 237 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMI------EARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK--- 237 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC---
T ss_pred ccceEEEeCCCCCeEEECCCcc------chhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC---
Confidence 2789999999999999999887 688999999999999999985 46799999999999999877753
Q ss_pred CCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEe
Q 013797 370 NRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 370 ~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
+..++++ .++++|||+||.+. ....++++| || ++++|+.++ ++|.+|..|+++++
T Consensus 238 r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~y--d~----~~~~W~~~~--~~~~~r~~~~~~~~ 293 (306)
T 3ii7_A 238 GVTVKCA--AVGSIVYVLAGFQGVGRLGHILEY--NT----ETDKWVANS--KVRAFPVTSCLICV 293 (306)
T ss_dssp BSCCEEE--EETTEEEEEECBCSSSBCCEEEEE--ET----TTTEEEEEE--EEECCSCTTCEEEE
T ss_pred ccceeEE--EECCEEEEEeCcCCCeeeeeEEEE--cC----CCCeEEeCC--CcccccceeEEEEE
Confidence 4444444 77999999999876 345566666 54 455999998 56788999988876
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.9e-41 Score=317.45 Aligned_cols=269 Identities=20% Similarity=0.320 Sum_probs=228.3
Q ss_pred CeEEEecc-C-----CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCC---CeEEEEECCCCC-
Q 013797 142 PSVFMLAS-G-----DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEG---GVIWRYELETNN- 211 (436)
Q Consensus 142 ~~l~~~~~-~-----~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~---~~v~~ydp~t~~- 211 (436)
..++++.+ . .+.+++||+.+++|..++++|.++..+ +++..++.||++||.... +++++||+.+++
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV----ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC----EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc----cEEEECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 45666655 1 357899999999999999988876543 377889999999996533 689999999999
Q ss_pred --EEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEecc
Q 013797 212 --WFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGR 289 (436)
Q Consensus 212 --W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~ 289 (436)
|++++++|.+|..|+++.++++||++||..... ..+++++||+.+++|+.++++|.+|..|++++++++||++||.
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR--RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC--BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCc--ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 999999999999999999999999999987644 5789999999999999999999999999999999999999998
Q ss_pred CCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCC
Q 013797 290 NEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVP 364 (436)
Q Consensus 290 ~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p 364 (436)
+... ..+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|++++.+|
T Consensus 169 ~~~~-~~~~~~~~d~~~~~W~~~~~~p------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 169 DGLN-ILNSVEKYDPHTGHWTNVTPMA------TKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp CSSC-BCCCEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred CCCc-ccceEEEEeCCCCcEEeCCCCC------cccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 7655 6889999999999999999887 688899999999999999986 568999999999999998776
Q ss_pred CccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEeeC
Q 013797 365 VRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVMVA 436 (436)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~~~ 436 (436)
.. +..++++ .++++||++||.+. .....+++| ||+. ++|+.++ ++|.+|+.|+|+++.+
T Consensus 242 ~~---r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~y--d~~~----~~W~~~~--~~~~~r~~~~~~~~~~ 301 (301)
T 2vpj_A 242 TP---RCYVGAT--VLRGRLYAIAGYDGNSLLSSIECY--DPII----DSWEVVT--SMGTQRCDAGVCVLRE 301 (301)
T ss_dssp SC---CBSCEEE--EETTEEEEECCBCSSSBEEEEEEE--ETTT----TEEEEEE--EEEEEEESCEEEEEEC
T ss_pred Cc---ccceeEE--EECCEEEEEcCcCCCcccccEEEE--cCCC----CeEEEcC--CCCcccccceEEEeCC
Confidence 43 4455444 78999999999875 323445555 6554 5999998 5688999999998854
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=9.4e-40 Score=312.98 Aligned_cols=269 Identities=19% Similarity=0.287 Sum_probs=216.2
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec----C-C----CeEEEEECCCCCEE
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI----E-G----GVIWRYELETNNWF 213 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~----~-~----~~v~~ydp~t~~W~ 213 (436)
.++++. +..+++|||.+++|.. +++|.+.. +..++++..++.||++||.. . . +.+++||+.+++|+
T Consensus 6 ~l~~~G--G~~~~~yd~~~~~W~~-~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 6 LIFMIS--EEGAVAYDPAANECYC-ASLSSQVP--KNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEE-EECCCCSC--SSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEEc--CCceEEECCCCCeEec-CCCCCCCC--ccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 344443 3789999999999987 66655321 12234777899999999952 1 1 35999999999999
Q ss_pred eCCCCCCCCcccEEEEeCCEEEEEcCcCC-CCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCC
Q 013797 214 KGPSMRRPRCLFASATCGTFAFVAGGHGM-DGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEK 292 (436)
Q Consensus 214 ~l~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~ 292 (436)
+++++|.+|..|++++++++||++||... ......+++++||+.+++|+.++++|.+|..|++++++++||++||....
T Consensus 81 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp ECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT
T ss_pred ECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC
Confidence 99999999999999999999999999753 22336789999999999999999999999999999999999999998554
Q ss_pred CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCCCcc
Q 013797 293 DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVPVRA 367 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~ 367 (436)
....+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|+.++.+|.+
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~- 233 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQ------TARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE- 233 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCS------SCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC-
T ss_pred CcccceEEEEeCCCCeEEECCCCC------CchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc-
Confidence 457899999999999999999887 689999999999999999985 34799999999999999877643
Q ss_pred CCCCCceEEEEEeCCEEEEEcCCCCC-----C---CCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEee
Q 013797 368 DFNRGWGIAFKSLGNELLVIGASSTS-----S---HESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVMV 435 (436)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~v~GG~~~~-----~---~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~~ 435 (436)
+..++++ .++++|||+||.+.. . .....+|.|||+++ +|+++. +.+|+.|+++++.
T Consensus 234 --r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~----~~~r~~~~~~~~~ 297 (315)
T 4asc_A 234 --RSSLSLV--SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK----KWEGVL----REIAYAAGATFLP 297 (315)
T ss_dssp --CBSCEEE--EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT----EEEEEE----SCSSCCSSCEEEE
T ss_pred --ccceeEE--EECCEEEEECCccccCcCCccccccccCcEEEecCCCC----hhhhhc----cCCcCccceEEeC
Confidence 5555444 789999999997530 0 11223455566554 999993 6678888877764
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-39 Score=310.31 Aligned_cols=267 Identities=15% Similarity=0.269 Sum_probs=216.6
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC---------CCeEEEEECCCCCEE
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE---------GGVIWRYELETNNWF 213 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~---------~~~v~~ydp~t~~W~ 213 (436)
.++++. +..+++|||.+++|.. ++++.+.. ...++++..++.||++||... .+.+++||+.+++|+
T Consensus 17 ~i~~~G--G~~~~~yd~~~~~W~~-~~~~~~~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 17 LILLVN--DTAAVAYDPMENECYL-TALAEQIP--RNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEEC--SSEEEEEETTTTEEEE-EEECTTSC--SSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhhcc--ccceEEECCCCCceec-ccCCccCC--ccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 444443 4568999999999998 44543211 112347788999999999421 134999999999999
Q ss_pred eCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCC
Q 013797 214 KGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKD 293 (436)
Q Consensus 214 ~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~ 293 (436)
+++++|.+|..|++++++++||++||.........+++++||+.+++|+.++++|.+|..|++++++++||++||.....
T Consensus 92 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 92 GLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp ECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSS
T ss_pred ECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCC
Confidence 99999999999999999999999999864333367899999999999999999999999999999999999999986554
Q ss_pred CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEcccCCCccC
Q 013797 294 KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS-----SNELRVYLKDSNSWKNLGLVPVRAD 368 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~~ 368 (436)
...+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++||+++++|++++.+|..
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-- 243 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMK------TPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE-- 243 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSC--
T ss_pred CccceEEEEcCCCCEEEECCCCC------CCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCc--
Confidence 47889999999999999999887 788999999999999999984 35799999999999999877753
Q ss_pred CCCCceEEEEEeCCEEEEEcCCCCC----------CCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEee
Q 013797 369 FNRGWGIAFKSLGNELLVIGASSTS----------SHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVMV 435 (436)
Q Consensus 369 ~~~~~~~~~~~~~~~l~v~GG~~~~----------~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~~ 435 (436)
+..+++ +.++++||++||.+.. ...++++| || ++++|+++ +|.+|+.|+++++.
T Consensus 244 -r~~~~~--~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y--d~----~~~~W~~~----~~~~r~~~~~~~~~ 307 (318)
T 2woz_A 244 -RSSISL--VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKY--ED----DKKEWAGM----LKEIRYASGASCLA 307 (318)
T ss_dssp -CBSCEE--EEETTEEEEECCBCCBC----CCBCCBCCCEEEE--ET----TTTEEEEE----ESCCGGGTTCEEEE
T ss_pred -ccceEE--EEECCEEEEECCeeccCCCCceeccceeeeEEEE--eC----CCCEehhh----cccccccccceeeC
Confidence 444444 4789999999998641 13455555 55 45599998 47788888888764
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.7e-36 Score=283.18 Aligned_cols=230 Identities=20% Similarity=0.405 Sum_probs=195.2
Q ss_pred eEEeCCEEEEEceecCC--CeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC
Q 013797 183 SLCAGTHLIVSGNEIEG--GVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS 260 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~--~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 260 (436)
.+..++.||++||.... +++++||+.+++|.+++++|.+|..|+++.++++||++||..... ..+++++||+.+++
T Consensus 11 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 11 PMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL--RVRTVDSYDPVKDQ 88 (302)
T ss_dssp ----CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS--BCCCEEEEETTTTE
T ss_pred ccCCCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc--cccceEEECCCCCc
Confidence 45678999999996543 689999999999999999999999999999999999999987543 67899999999999
Q ss_pred eEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 013797 261 WDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSL 340 (436)
Q Consensus 261 W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~ 340 (436)
|+.++++|.+|..|++++++++||++||.+... ..+++++||+.+++|+.++++| .+|..+++++++++||++
T Consensus 89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMN------TRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEE
T ss_pred eeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCC------CcccCceEEEECCEEEEE
Confidence 999999999999999999999999999987654 6789999999999999999887 688999999999999999
Q ss_pred ecC-------CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCcc
Q 013797 341 ETS-------SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGEL 412 (436)
Q Consensus 341 gg~-------~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~ 412 (436)
||. .+++++||+.+++|++++.+|. ++..++++ .++++||++||.+. .....+++| | .+++
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~y--d----~~~~ 230 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMST---RRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVY--D----PTTN 230 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSS---CCBSCEEE--EETTEEEEECCBSSSSBCCCEEEE--E----TTTT
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCcc---ccccccEE--EECCEEEEECCCCCCcccceEEEE--e----CCCC
Confidence 984 4679999999999999987764 34554444 78999999999876 334566676 4 4555
Q ss_pred CcEEeecCCCCCCceeeeeEEe
Q 013797 413 QWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 413 ~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
+|++++ ++|.+|..|+++++
T Consensus 231 ~W~~~~--~~~~~r~~~~~~~~ 250 (302)
T 2xn4_A 231 AWRQVA--DMNMCRRNAGVCAV 250 (302)
T ss_dssp EEEEEC--CCSSCCBSCEEEEE
T ss_pred CEeeCC--CCCCccccCeEEEE
Confidence 999999 56778888877765
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=284.26 Aligned_cols=227 Identities=18% Similarity=0.277 Sum_probs=197.2
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG 266 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~ 266 (436)
.+.||++||....+++++||+.+++|++++++|.+|..|++++++++||++||.. . ...+++++||+.+++|+.+++
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~--~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-L--FPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-S--SBCCEEEEEETTTTEEEEEEC
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-C--CCcceEEEEeCCCCeEEECCC
Confidence 5889999998777899999999999999999999999999999999999999987 2 267899999999999999999
Q ss_pred CccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC---
Q 013797 267 MRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS--- 343 (436)
Q Consensus 267 ~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~--- 343 (436)
+|.+|..|++++++++||++||.+......+++++||+.+++|+.++++| .+|..+++++++++||++||.
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p------~~r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML------TQRCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS------SCCBSCEEEEETTEEEEECCEESC
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc------CCcceeEEEEECCEEEEECCCCCC
Confidence 99999999999999999999998744447889999999999999999987 688999999999999999984
Q ss_pred ------CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCccCcEE
Q 013797 344 ------SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGELQWRL 416 (436)
Q Consensus 344 ------~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~~W~~ 416 (436)
.+++++||+++++|++++.+|. ++..++++ .++++|||+||.+. .....+++| | .++++|+.
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~y--d----~~~~~W~~ 230 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIE---ARKNHGLV--FVKDKIFAVGGQNGLGGLDNVEYY--D----IKLNEWKM 230 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSS---CCBSCEEE--EETTEEEEECCEETTEEBCCEEEE--E----TTTTEEEE
T ss_pred CCcccccceEEEeCCCCCeEEECCCccc---hhhcceEE--EECCEEEEEeCCCCCCCCceEEEe--e----CCCCcEEE
Confidence 5789999999999999987764 35555444 77999999999865 334566666 4 45559999
Q ss_pred eecCCCCCCceeeeeEEee
Q 013797 417 LECGKRPLSHFIHNCSVMV 435 (436)
Q Consensus 417 l~~~~~~~~~~~~~~~~~~ 435 (436)
++ ++|.+|..|++++++
T Consensus 231 ~~--~~p~~r~~~~~~~~~ 247 (306)
T 3ii7_A 231 VS--PMPWKGVTVKCAAVG 247 (306)
T ss_dssp CC--CCSCCBSCCEEEEET
T ss_pred CC--CCCCCccceeEEEEC
Confidence 98 568899988888763
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.2e-36 Score=284.70 Aligned_cols=232 Identities=20% Similarity=0.342 Sum_probs=197.1
Q ss_pred eEEeCCEEEEEceec--CCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCC--CCCCccceEEEEeCCC
Q 013797 183 SLCAGTHLIVSGNEI--EGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGM--DGSGVLNSAERYNPET 258 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~--~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~yd~~t 258 (436)
++..++.||++||.. ..+.+++||+.+++|+.++++|.+|..|++++++++||++||... ......+++++||+.+
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 678899999999962 236899999999999999999999999999999999999999831 1112578899999999
Q ss_pred CCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 259 KSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 259 ~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
++|+.++++|.+|..+++++++++||++||.+... ..+++++||+.+++|+.++++| .+|..+++++++++||
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~iy 172 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPML------TRRIGVGVAVLNRLLY 172 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCS------SCCBSCEEEEETTEEE
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCC------ccccceEEEEECCEEE
Confidence 99999999999999999999999999999987654 6788999999999999999887 6889999999999999
Q ss_pred EEecC-----CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCcc
Q 013797 339 SLETS-----SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGEL 412 (436)
Q Consensus 339 v~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~~ 412 (436)
++||. .+++++||+.+++|+.++.+|. ++..++++ .++++|||+||.+. ....++++| | ++++
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~y--d----~~~~ 241 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNT---IRSGAGVC--VLHNCIYAAGGYDGQDQLNSVERY--D----VETE 241 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSS---CCBSCEEE--EETTEEEEECCBCSSSBCCCEEEE--E----TTTT
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCC---ccccceEE--EECCEEEEEeCCCCCCccceEEEE--e----CCCC
Confidence 99985 4689999999999999987764 35555444 77999999999876 345566666 4 4555
Q ss_pred CcEEeecCCCCCCceeeeeEEe
Q 013797 413 QWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 413 ~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
+|++++ ++|.+|+.|+++++
T Consensus 242 ~W~~~~--~~p~~r~~~~~~~~ 261 (308)
T 1zgk_A 242 TWTFVA--PMKHRRSALGITVH 261 (308)
T ss_dssp EEEECC--CCSSCCBSCEEEEE
T ss_pred cEEECC--CCCCCccceEEEEE
Confidence 999999 56888988888765
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=9.8e-36 Score=289.92 Aligned_cols=259 Identities=15% Similarity=0.180 Sum_probs=201.9
Q ss_pred CCeEEEecc-CCCeEEEEecC--CCCeEeCCCCC-CCCCccCCCeeeEEeCCEEEEEcee-c--C-----CCeEEEEECC
Q 013797 141 EPSVFMLAS-GDSSWWAFDRH--FQTRRKLPELP-SDPCFKLGDKESLCAGTHLIVSGNE-I--E-----GGVIWRYELE 208 (436)
Q Consensus 141 ~~~l~~~~~-~~~~~~~~dp~--~~~W~~l~~~~-~~~~~~~~~~~~~~~~~~iyv~GG~-~--~-----~~~v~~ydp~ 208 (436)
...+|++.+ ..+.+++||+. +++|..++++| .++..+ +++++++.|||+||. . . .+++++||+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA----TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC----EEEEETTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc----eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 345666654 34679999998 49999999999 565443 377889999999997 2 1 2689999999
Q ss_pred CCCEEeCCCCC-CCCcccEEEEeCCEEEEEcCcCCCC--------------------------------CCccceEEEEe
Q 013797 209 TNNWFKGPSMR-RPRCLFASATCGTFAFVAGGHGMDG--------------------------------SGVLNSAERYN 255 (436)
Q Consensus 209 t~~W~~l~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~--------------------------------~~~~~~~~~yd 255 (436)
+++|+++++++ .+|..|++++++++||++||..... ...++++++||
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 99999999988 9999999999999999999976421 01357999999
Q ss_pred CCCCCeEeCCCCccCCcc-eeEEEECCEEEEEeccCCCCCcCCEEEEEEC--CCCcEEEcCCCCCCCCCCCCCCCCEEEE
Q 013797 256 PETKSWDSLPGMRQRRKL-CSGCYMDNKFYVIGGRNEKDKPLTCGEAYDE--YAGTWYHIPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 256 ~~t~~W~~~~~~p~~r~~-~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~--~~~~W~~v~~~~~~~~~~~~r~~~~~~~ 332 (436)
+.+++|+.++++|.++.. +++++++++||++||....+...+.+++||+ .+++|+.+++++. +..|.++++++
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~----~~~~~~~~~~~ 250 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS----PDGVAGGFAGI 250 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST----TTCCBSCEEEE
T ss_pred CCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC----CcccccceEEE
Confidence 999999999999976554 8899999999999998655446778999987 9999999998852 24566788999
Q ss_pred ECCEEEEEecCC----------------------CeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCC
Q 013797 333 VNNELYSLETSS----------------------NELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 333 ~~g~lyv~gg~~----------------------~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
++++||++||.. .++++||+++++|++++.+|.+ |..+++ +..+++|||+||.
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~--~~~~~~i~v~GG~ 325 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG---RAYGVS--LPWNNSLLIIGGE 325 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC---CBSSEE--EEETTEEEEEEEE
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC---ccccee--EEeCCEEEEEeee
Confidence 999999999842 3689999999999999887753 444444 3789999999998
Q ss_pred CC--CCCCcEEEEeecCCCCCCccCcEEee
Q 013797 391 ST--SSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 391 ~~--~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
+. ....+++++. .++++|.++.
T Consensus 326 ~~~~~~~~~v~~l~------~~~~~~~~~~ 349 (357)
T 2uvk_A 326 TAGGKAVTDSVLIT------VKDNKVTVQN 349 (357)
T ss_dssp CGGGCEEEEEEEEE------C-CCSCEEEC
T ss_pred CCCCCEeeeEEEEE------EcCcEeEeee
Confidence 76 2245666663 4456998887
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.6e-35 Score=286.89 Aligned_cols=248 Identities=16% Similarity=0.151 Sum_probs=194.6
Q ss_pred eCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECC--CCCEEeCCCCC-CCCcccEEEEeCCEEEEEcCc-C
Q 013797 166 KLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELE--TNNWFKGPSMR-RPRCLFASATCGTFAFVAGGH-G 241 (436)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~--t~~W~~l~~~p-~~r~~~~~~~~~~~iyv~GG~-~ 241 (436)
.+++||.++..+ +++.+++.||++||.. .+++++||+. +++|++++++| .+|..|++++++++|||+||. .
T Consensus 2 ~l~~lP~~r~~~----~~~~~~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~ 76 (357)
T 2uvk_A 2 VLPETPVPFKSG----TGAIDNDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGK 76 (357)
T ss_dssp CSCCCSSCCCSC----EEEEETTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEE
T ss_pred CCCCCCccccce----EEEEECCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCC
Confidence 477888877543 3567799999999965 4589999998 49999999999 899999999999999999998 3
Q ss_pred --CCCCCccceEEEEeCCCCCeEeCCCCc-cCCcceeEEEECCEEEEEeccCCCC-------------------------
Q 013797 242 --MDGSGVLNSAERYNPETKSWDSLPGMR-QRRKLCSGCYMDNKFYVIGGRNEKD------------------------- 293 (436)
Q Consensus 242 --~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~g~iyv~gG~~~~~------------------------- 293 (436)
......++++++||+.+++|+.+++|+ .+|..|++++++++||++||.+...
T Consensus 77 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 77 NSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp CTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 112235789999999999999999888 8999999999999999999975421
Q ss_pred --------CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC------CCeEEEEEC--CCCcE
Q 013797 294 --------KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS------SNELRVYLK--DSNSW 357 (436)
Q Consensus 294 --------~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~------~~~i~~yd~--~~~~W 357 (436)
...+++++||+.+++|+.++++|. ..+.++++++++++||++||. .+++++||+ ++++|
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W 231 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPW-----YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKW 231 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSS-----CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEE
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCC-----CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcE
Confidence 146899999999999999988872 334558999999999999984 567999986 89999
Q ss_pred EEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC------------------CCCCcEEEEeecCCCCCCccCcEEeec
Q 013797 358 KNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST------------------SSHESMAIYTCCPSSDAGELQWRLLEC 419 (436)
Q Consensus 358 ~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~------------------~~~~~~~~y~~~p~~d~~~~~W~~l~~ 419 (436)
++++.+|.+ +..++++++..+++|||+||.+. .....+++| | +++++|++++
T Consensus 232 ~~~~~~~~~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y--d----~~~~~W~~~~- 301 (357)
T 2uvk_A 232 NKLAPVSSP---DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH--L----WHNGKWDKSG- 301 (357)
T ss_dssp EECCCSSTT---TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE--E----CC---CEEEE-
T ss_pred EecCCCCCC---cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEE--e----cCCCceeeCC-
Confidence 999887643 23333444589999999999642 112355666 5 4455999998
Q ss_pred CCCCCCceeeeeEEe
Q 013797 420 GKRPLSHFIHNCSVM 434 (436)
Q Consensus 420 ~~~~~~~~~~~~~~~ 434 (436)
++|.+|+.|+++++
T Consensus 302 -~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 302 -ELSQGRAYGVSLPW 315 (357)
T ss_dssp -ECSSCCBSSEEEEE
T ss_pred -CCCCCcccceeEEe
Confidence 46788888888765
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=274.90 Aligned_cols=228 Identities=24% Similarity=0.361 Sum_probs=195.9
Q ss_pred EeCCEEEEEce-ecC---CCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC
Q 013797 185 CAGTHLIVSGN-EIE---GGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS 260 (436)
Q Consensus 185 ~~~~~iyv~GG-~~~---~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 260 (436)
..++.||++|| ... .+++++||+.+++|..++++|.+|..|+++.++++||++||..+.. ..+++++||+.+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~--~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS--RLSSVECLDYTADE 89 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC--BCCCEEEEETTCCT
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc--cCceEEEEECCCCC
Confidence 46889999999 432 3689999999999999999999999999999999999999987543 67899999999999
Q ss_pred ---eEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEE
Q 013797 261 ---WDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNEL 337 (436)
Q Consensus 261 ---W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~l 337 (436)
|+.++++|.+|..|++++++++||++||..... ..+++++||+.+++|+.++++| .+|..+++++++++|
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p------~~r~~~~~~~~~~~i 162 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQ------TAREGAGLVVASGVI 162 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECS------SCCBSCEEEEETTEE
T ss_pred CCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCC------CCcccceEEEECCEE
Confidence 999999999999999999999999999987654 6789999999999999999887 688999999999999
Q ss_pred EEEecC-----CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC-CCCCcEEEEeecCCCCCCc
Q 013797 338 YSLETS-----SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST-SSHESMAIYTCCPSSDAGE 411 (436)
Q Consensus 338 yv~gg~-----~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~y~~~p~~d~~~ 411 (436)
|++||. .+++++||+.+++|++++.+|. ++..++++ ..+++||++||.+. .....+++| | .++
T Consensus 163 yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~y--d----~~~ 231 (301)
T 2vpj_A 163 YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT---KRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAY--N----IRT 231 (301)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTEEEEECCCSS---CCBSCEEE--EETTEEEEECCBCSSSBCCCEEEE--E----TTT
T ss_pred EEECCCCCCcccceEEEEeCCCCcEEeCCCCCc---ccccceEE--EECCEEEEEeCCCCCcccceEEEE--e----CCC
Confidence 999985 4689999999999999987764 34444444 78999999999876 335667777 4 555
Q ss_pred cCcEEeecCCCCCCceeeeeEEe
Q 013797 412 LQWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 412 ~~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
++|++++ ++|.+|+.|+++++
T Consensus 232 ~~W~~~~--~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 232 DSWTTVT--SMTTPRCYVGATVL 252 (301)
T ss_dssp TEEEEEC--CCSSCCBSCEEEEE
T ss_pred CcEEECC--CCCCcccceeEEEE
Confidence 6999998 56788888888765
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=277.88 Aligned_cols=219 Identities=19% Similarity=0.280 Sum_probs=190.8
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC------CCeEEEEECCCCCEEeCCCCCCCCcccE
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE------GGVIWRYELETNNWFKGPSMRRPRCLFA 226 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~------~~~v~~ydp~t~~W~~l~~~p~~r~~~~ 226 (436)
.++.||+.+++|..++++|.++..+ +++..++.||++||... .+++++||+.+++|++++++|.+|..|+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLF----GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESC----EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEecCCCCeEEECCCCCcchhce----eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 4889999999999999999876554 37788999999999642 2789999999999999999999999999
Q ss_pred EEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 227 SATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 227 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
+++++++||++||..... ...+++++||+.+++|+.++++|.+|..|++++++++||++||.+..+ ..+++++||+.+
T Consensus 144 ~~~~~~~iyv~GG~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~ 221 (315)
T 4asc_A 144 VLSHMDLVYVIGGKGSDR-KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-LTSSAEVYSITD 221 (315)
T ss_dssp EEEETTEEEEECCBCTTS-CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-EEEEEEEEETTT
T ss_pred EEEECCEEEEEeCCCCCC-cccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-ccceEEEEECCC
Confidence 999999999999984332 267899999999999999999999999999999999999999987665 678999999999
Q ss_pred CcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCC--------------CeEEEEECCCCcEEEcccCCCccCCCCC
Q 013797 307 GTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSS--------------NELRVYLKDSNSWKNLGLVPVRADFNRG 372 (436)
Q Consensus 307 ~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~--------------~~i~~yd~~~~~W~~v~~~p~~~~~~~~ 372 (436)
++|+.++++| .+|..+++++++++||++||.. +++++||+++++|+++... ++..
T Consensus 222 ~~W~~~~~~p------~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~-----~r~~ 290 (315)
T 4asc_A 222 NKWAPFEAFP------QERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLRE-----IAYA 290 (315)
T ss_dssp TEEEEECCCS------SCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESC-----SSCC
T ss_pred CeEEECCCCC------CcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccC-----CcCc
Confidence 9999999887 7889999999999999999852 4689999999999999332 2455
Q ss_pred ceEEEEEeCCEEEEEcCC
Q 013797 373 WGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 373 ~~~~~~~~~~~l~v~GG~ 390 (436)
++++ .++++||++...
T Consensus 291 ~~~~--~~~~~l~v~~~~ 306 (315)
T 4asc_A 291 AGAT--FLPVRLNVLRLT 306 (315)
T ss_dssp SSCE--EEEEEECGGGSE
T ss_pred cceE--EeCCEEEEEEeh
Confidence 5555 789999998654
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1e-34 Score=278.26 Aligned_cols=230 Identities=18% Similarity=0.299 Sum_probs=196.3
Q ss_pred cCCeEEEeccC-----------CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC--C---CeEE
Q 013797 140 REPSVFMLASG-----------DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE--G---GVIW 203 (436)
Q Consensus 140 ~~~~l~~~~~~-----------~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~--~---~~v~ 203 (436)
....+|++.+. ...++.||+.+++|.+++++|.++..+ +++..+++||++||... . ++++
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF----GLGEVDDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC----EEEEETTEEEEEEEEBTTTCCEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc----ceEEECCEEEEEcCccCCCCcccceEE
Confidence 34567777651 013889999999999999999887644 37788999999999752 1 6899
Q ss_pred EEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEE
Q 013797 204 RYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKF 283 (436)
Q Consensus 204 ~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~i 283 (436)
+||+.+++|++++++|.+|..|++++++++||++||..... ...+++++||+.+++|+.++++|.+|..|++++++++|
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 209 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDK-KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKI 209 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSS-CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCC-CccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEE
Confidence 99999999999999999999999999999999999985432 25789999999999999999999999999999999999
Q ss_pred EEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC--------------CCeEEE
Q 013797 284 YVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS--------------SNELRV 349 (436)
Q Consensus 284 yv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~--------------~~~i~~ 349 (436)
|++||.+..+ ..+++++||+.+++|+.++++| .+|..+++++++++||++||. .+++++
T Consensus 210 yv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p------~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 210 VIAGGVTEDG-LSASVEAFDLKTNKWEVMTEFP------QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp EEEEEEETTE-EEEEEEEEETTTCCEEECCCCS------SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred EEEcCcCCCC-ccceEEEEECCCCeEEECCCCC------CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEE
Confidence 9999987654 6788999999999999999887 678899999999999999985 357999
Q ss_pred EECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEc
Q 013797 350 YLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 350 yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
||+++++|+++ +|. .+..++++ .++++|||+.
T Consensus 283 yd~~~~~W~~~--~~~---~r~~~~~~--~~~~~iyi~~ 314 (318)
T 2woz_A 283 YEDDKKEWAGM--LKE---IRYASGAS--CLATRLNLFK 314 (318)
T ss_dssp EETTTTEEEEE--ESC---CGGGTTCE--EEEEEEEGGG
T ss_pred EeCCCCEehhh--ccc---ccccccce--eeCCEEEEEE
Confidence 99999999998 443 34555555 7899999875
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=2.3e-30 Score=272.86 Aligned_cols=218 Identities=14% Similarity=0.131 Sum_probs=179.7
Q ss_pred eEEeCCEEEEEceecC--CCeEEEEECCCCCEEeCC-C-----CCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEE
Q 013797 183 SLCAGTHLIVSGNEIE--GGVIWRYELETNNWFKGP-S-----MRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~--~~~v~~ydp~t~~W~~l~-~-----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
+++.++.||++||... .+++++||+.+++|+.++ + +|.+|..|+++++ +++|||+||...... .+++++
T Consensus 393 ~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~-~~~dv~ 471 (695)
T 2zwa_A 393 VDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ-GLSDNW 471 (695)
T ss_dssp EEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC-BCCCCE
T ss_pred EEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC-ccccEE
Confidence 4558999999999743 368999999999999998 5 7899999999999 999999999876432 578999
Q ss_pred EEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEE
Q 013797 253 RYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIA 331 (436)
Q Consensus 253 ~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~ 331 (436)
+||+.+++|+.+++||.+|..|+++++ +++||++||.+... ++++||+.+++|+.+++.. ..+.+|.+++++
T Consensus 472 ~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g---~~p~~r~~~~a~ 544 (695)
T 2zwa_A 472 IFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKD---EFFQNSLVSAGL 544 (695)
T ss_dssp EEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSS---GGGGSCCBSCEE
T ss_pred EEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCC---CCCCcccceeEE
Confidence 999999999999999999999999996 99999999987543 8999999999999998721 112788899878
Q ss_pred EEC---CEEEEEecC-------CCeEEEEECCCCc------EEEcccCCCccCCCCCceEEEEEeC-CEEEEEcCCCCC-
Q 013797 332 VVN---NELYSLETS-------SNELRVYLKDSNS------WKNLGLVPVRADFNRGWGIAFKSLG-NELLVIGASSTS- 393 (436)
Q Consensus 332 ~~~---g~lyv~gg~-------~~~i~~yd~~~~~------W~~v~~~p~~~~~~~~~~~~~~~~~-~~l~v~GG~~~~- 393 (436)
+++ ++||++||. .+++++||+.+++ |+.+..+|. .+|.+++++ .++ ++|||+||.+..
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~--~~R~~~~~~--~~~~~~iyv~GG~~~~~ 620 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL--FQRYGSQIK--YITPRKLLIVGGTSPSG 620 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG--GCCBSCEEE--EEETTEEEEECCBCSSC
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC--CCcccceEE--EeCCCEEEEECCccCCC
Confidence 877 899999986 4679999999999 899877542 345555444 677 999999998652
Q ss_pred ---CCCcEEEEeecCCCCCCccCcEEee
Q 013797 394 ---SHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 394 ---~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
....+++| | .++++|+.++
T Consensus 621 ~~~~~~~v~~y--d----~~t~~W~~~~ 642 (695)
T 2zwa_A 621 LFDRTNSIISL--D----PLSETLTSIP 642 (695)
T ss_dssp CCCTTTSEEEE--E----TTTTEEEECC
T ss_pred CCCCCCeEEEE--E----CCCCeEEEee
Confidence 35667777 4 5555999765
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=6.7e-30 Score=269.28 Aligned_cols=235 Identities=14% Similarity=0.177 Sum_probs=189.0
Q ss_pred CCeEEEeccC----CCeEEEEecCCCCeEeCC-C-----CCCCCCccCCCeeeEEe--CCEEEEEceecCC----CeEEE
Q 013797 141 EPSVFMLASG----DSSWWAFDRHFQTRRKLP-E-----LPSDPCFKLGDKESLCA--GTHLIVSGNEIEG----GVIWR 204 (436)
Q Consensus 141 ~~~l~~~~~~----~~~~~~~dp~~~~W~~l~-~-----~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~----~~v~~ 204 (436)
...+|++.+. .+.+++||+.+++|..++ + +|.++..+ +++++ ++.|||+||.... +++++
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h----s~~~~~~~~~lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH----TFTTISRNNQLLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC----EEEEETTTTEEEEECCBSSTTCBCCCCEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce----EEEEEccCCEEEEEcCCCCCCCccccEEE
Confidence 3456776652 367999999999999998 6 45554433 47777 9999999997543 68999
Q ss_pred EECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC---CccCCcceeEEEEC
Q 013797 205 YELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG---MRQRRKLCSGCYMD 280 (436)
Q Consensus 205 ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~ 280 (436)
||+.+++|+.++++|.+|..|+++++ +++|||+||..... ++++||+.+++|+.+++ +|.+|..|++++++
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred EeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----CEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 99999999999999999999999996 99999999987542 79999999999999986 89999999988877
Q ss_pred ---CEEEEEeccCCCC-CcCCEEEEEECCCCc------EEEcCCCCCCCCCCCCCCCCEEEEEC-CEEEEEecC------
Q 013797 281 ---NKFYVIGGRNEKD-KPLTCGEAYDEYAGT------WYHIPDILKDFPAETGKSPPLIAVVN-NELYSLETS------ 343 (436)
Q Consensus 281 ---g~iyv~gG~~~~~-~~~~~v~~yD~~~~~------W~~v~~~~~~~~~~~~r~~~~~~~~~-g~lyv~gg~------ 343 (436)
++||++||....+ ...+++++||+.+++ |+.+.++| +.+|.++++++++ ++||++||.
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-----~~~R~~~~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-----LFQRYGSQIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-----GGCCBSCEEEEEETTEEEEECCBCSSCCC
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-----CCCcccceEEEeCCCEEEEECCccCCCCC
Confidence 9999999985443 467899999999999 89988754 2688999999999 999999984
Q ss_pred --CCeEEEEECCCCcEEEcccCCCcc-----CCCCCceEEEEEeCC-EEEEEcCCCC
Q 013797 344 --SNELRVYLKDSNSWKNLGLVPVRA-----DFNRGWGIAFKSLGN-ELLVIGASST 392 (436)
Q Consensus 344 --~~~i~~yd~~~~~W~~v~~~p~~~-----~~~~~~~~~~~~~~~-~l~v~GG~~~ 392 (436)
.+++++||+.+++|+.+. +|... ..+.+++++ .+++ +|||+||...
T Consensus 623 ~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~--~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 623 DRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLV--STSMGTIHIIGGGAT 676 (695)
T ss_dssp CTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEE--CC---CEEEECCEEE
T ss_pred CCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEE--EeCCCEEEEEeCCcc
Confidence 467999999999999763 33211 123344433 5555 9999999643
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=6.8e-30 Score=268.42 Aligned_cols=258 Identities=14% Similarity=0.171 Sum_probs=194.4
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCC---------CeEEEEECCCCCEEeCCCCCCCC
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEG---------GVIWRYELETNNWFKGPSMRRPR 222 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~---------~~v~~ydp~t~~W~~l~~~p~~r 222 (436)
.+.+|||.+++|..++++|... . ++++.. +++||++||.... ..+++||+.+++|+.+++++.+|
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~--~---~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVP--A---AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH 241 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCC--S---EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred ccccCCCCCCeeeeeccCCCCc--e---eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence 4778999999999998887621 1 123333 9999999986432 37899999999999999998888
Q ss_pred cccE--EE-EeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCE
Q 013797 223 CLFA--SA-TCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTC 298 (436)
Q Consensus 223 ~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~ 298 (436)
..++ ++ ..+++||++||.... ++++||+.+++|+.+++|+.+|..|+++++ +|+||++||........++
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~------~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAK------KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTT------CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCC
T ss_pred CCccccccCCCCCCEEEeCCCCCC------ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCccccc
Confidence 6654 33 358999999997642 699999999999999999999999999998 9999999995333336788
Q ss_pred EEEEECCCCcEEEcC-----CCCCCCCC---------------------------------------------------C
Q 013797 299 GEAYDEYAGTWYHIP-----DILKDFPA---------------------------------------------------E 322 (436)
Q Consensus 299 v~~yD~~~~~W~~v~-----~~~~~~~~---------------------------------------------------~ 322 (436)
+++||+.+++|+.++ +++..... +
T Consensus 316 ~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 316 GEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 395 (656)
T ss_dssp EEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC
T ss_pred ceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC
Confidence 999999999999973 23221000 0
Q ss_pred CCCCCCEEEE---ECCEEEEEecCC--------C---eEEEEECCCCcEEEcc--cCCCccCCCCCceEEEEEe-CCEEE
Q 013797 323 TGKSPPLIAV---VNNELYSLETSS--------N---ELRVYLKDSNSWKNLG--LVPVRADFNRGWGIAFKSL-GNELL 385 (436)
Q Consensus 323 ~~r~~~~~~~---~~g~lyv~gg~~--------~---~i~~yd~~~~~W~~v~--~~p~~~~~~~~~~~~~~~~-~~~l~ 385 (436)
..+..+.+++ .+++||++||.. + .+++||+.+++|.++. .||. .|..++++ .+ +++||
T Consensus 396 ~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~---~R~~~~~~--~l~~g~i~ 470 (656)
T 1k3i_A 396 PDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF---ARTFHTSV--VLPDGSTF 470 (656)
T ss_dssp CCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS---CCBSCEEE--ECTTSCEE
T ss_pred CCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC---CcccCCeE--ECCCCCEE
Confidence 0112233333 489999999842 2 6899999999999986 5553 45555443 45 99999
Q ss_pred EEcCCCC-------CCCCcEEEEeecCCCCCCccCcEEeecCCCCCCceeeeeEEe
Q 013797 386 VIGASST-------SSHESMAIYTCCPSSDAGELQWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 386 v~GG~~~-------~~~~~~~~y~~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
|+||.+. .....+++| | .++++|+.++ +++.+|..|+++++
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~y--d----p~t~~W~~~~--~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIY--V----PEQDTFYKQN--PNSIVRVYHSISLL 518 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEE--E----GGGTEEEECC--CCSSCCCTTEEEEE
T ss_pred EECCcccCcCcCCCCcccceEEE--c----CCCCceeecC--CCCCccccccHhhc
Confidence 9999753 224567777 4 5556999998 57899999988776
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=1.3e-27 Score=251.20 Aligned_cols=237 Identities=15% Similarity=0.187 Sum_probs=183.8
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-C
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-G 231 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~ 231 (436)
.+++||+.+++|..+++++.++..+.. ..++..+++||++||... ..+++|||.+++|.++++|+.+|..|+++++ +
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~~~~~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d 297 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCP-GISMDGNGQIVVTGGNDA-KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD 297 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSC-EEEECTTSCEEEECSSST-TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccc-cccCCCCCCEEEeCCCCC-CceEEecCcCCceeECCCCCccccccceEEecC
Confidence 688999999999999988877654331 123346899999999654 3899999999999999999999999999999 9
Q ss_pred CEEEEEcCc-CCCCCCccceEEEEeCCCCCeEeCC-----CCccCC----------------------------------
Q 013797 232 TFAFVAGGH-GMDGSGVLNSAERYNPETKSWDSLP-----GMRQRR---------------------------------- 271 (436)
Q Consensus 232 ~~iyv~GG~-~~~~~~~~~~~~~yd~~t~~W~~~~-----~~p~~r---------------------------------- 271 (436)
++||++||. ++.. ..+++++||+.+++|+.++ +|+..+
T Consensus 298 g~iyv~GG~~~~~~--~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 298 GRVFTIGGSWSGGV--FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY 375 (656)
T ss_dssp SCEEEECCCCCSSS--CCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred CeEEEEeCcccCCc--ccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeee
Confidence 999999995 4332 5788999999999999863 333221
Q ss_pred -----------------------cceeEEE---ECCEEEEEeccCCCC--CcCC---EEEEEECCCCcEEEcC--CCCCC
Q 013797 272 -----------------------KLCSGCY---MDNKFYVIGGRNEKD--KPLT---CGEAYDEYAGTWYHIP--DILKD 318 (436)
Q Consensus 272 -----------------------~~~~~~~---~~g~iyv~gG~~~~~--~~~~---~v~~yD~~~~~W~~v~--~~~~~ 318 (436)
..++++. .+++||++||..... ...+ .+++||+.+++|..+. +||
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp-- 453 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY-- 453 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS--
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC--
Confidence 1122332 389999999964321 1334 7899999999999987 776
Q ss_pred CCCCCCCCCCEEEEE-CCEEEEEecCC-----------CeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEE
Q 013797 319 FPAETGKSPPLIAVV-NNELYSLETSS-----------NELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLV 386 (436)
Q Consensus 319 ~~~~~~r~~~~~~~~-~g~lyv~gg~~-----------~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v 386 (436)
.+|..+.++++ +|+||++||.. .++++||+++++|+.++.++. +|..+++++...+++|||
T Consensus 454 ----~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~---~R~~hs~a~ll~dg~v~v 526 (656)
T 1k3i_A 454 ----FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI---VRVYHSISLLLPDGRVFN 526 (656)
T ss_dssp ----SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS---CCCTTEEEEECTTSCEEE
T ss_pred ----CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC---ccccccHhhcCCCcEEEe
Confidence 78888888888 99999999842 579999999999999987764 467777664445999999
Q ss_pred EcCCCC----CCCCcEEEEe
Q 013797 387 IGASST----SSHESMAIYT 402 (436)
Q Consensus 387 ~GG~~~----~~~~~~~~y~ 402 (436)
+||... ....++++|+
T Consensus 527 ~GG~~~~~~~~~~~~~e~~~ 546 (656)
T 1k3i_A 527 GGGGLCGDCTTNHFDAQIFT 546 (656)
T ss_dssp EECCCCTTCSCCCCEEEEEE
T ss_pred cCCCCCCCCCCCeeEEEEEe
Confidence 999643 2334677773
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.93 E-value=6.4e-07 Score=88.55 Aligned_cols=270 Identities=13% Similarity=0.140 Sum_probs=145.8
Q ss_pred CCCCCCChHHHHHHhhccCCcccccccccccHhhhhhhccchhHHHHhh-cC----------------------------
Q 013797 88 YSFVPSLSDELEVLIVARVPRAEYWKFYLLNKRFLSLLKSGELFKIRRE-IG---------------------------- 138 (436)
Q Consensus 88 ~~~~~~LPddl~~~ILarLP~~~l~~~~~Vck~w~~li~s~~f~~~~~~-~~---------------------------- 138 (436)
..++..||+|++..||++|+..++.++..|||+|+.++.++.+++.... .+
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 3468899999999999999999999999999999999988766553210 00
Q ss_pred ---------------------ccCCeEE---------EeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC
Q 013797 139 ---------------------FREPSVF---------MLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT 188 (436)
Q Consensus 139 ---------------------~~~~~l~---------~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~ 188 (436)
+....+. +.......+..||..+.+-... +..+. ....++...++
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~---~~v~~~~~~~~ 170 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT--LVGHT---GGVWSSQMRDN 170 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE--CCCCS---SCEEEEEEETT
T ss_pred hhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEE--EcCCC---CCEEEEEecCC
Confidence 0000000 0011233555666665543321 11111 11112233344
Q ss_pred EEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCc
Q 013797 189 HLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMR 268 (436)
Q Consensus 189 ~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p 268 (436)
+++.|+. ...+.+||..+++-... +........+..+++..++.|+.+ ..+.+||..+++-... +.
T Consensus 171 -~l~s~~~--dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d-------g~i~~wd~~~~~~~~~--~~ 236 (445)
T 2ovr_B 171 -IIISGST--DRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD-------ATLRVWDIETGQCLHV--LM 236 (445)
T ss_dssp -EEEEEET--TSCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-------SEEEEEESSSCCEEEE--EE
T ss_pred -EEEEEeC--CCeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC-------CEEEEEECCCCcEEEE--Ec
Confidence 4445543 35688999988753321 111112222333444555666543 3588899887653221 11
Q ss_pred cCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEE
Q 013797 269 QRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELR 348 (436)
Q Consensus 269 ~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~ 348 (436)
.......++..++..++.|+.+ ..+..||+.+.+-.. .+. ........+..++..++.|+..+.|.
T Consensus 237 ~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~--~~~------~~~~~v~~~~~~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 237 GHVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLH--TLQ------GHTNRVYSLQFDGIHVVSGSLDTSIR 302 (445)
T ss_dssp CCSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEE--EEC------CCSSCEEEEEECSSEEEEEETTSCEE
T ss_pred CCcccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeE--Eec------CCCCceEEEEECCCEEEEEeCCCeEE
Confidence 1111223344577777777744 357889987764322 111 01111223444788788888888999
Q ss_pred EEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 349 VYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 349 ~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
+||..+.+-... +.. .......+ ...+.+++.|+.+ ..+.+|
T Consensus 303 i~d~~~~~~~~~--~~~----~~~~v~~~-~~~~~~l~~~~~d----g~i~vw 344 (445)
T 2ovr_B 303 VWDVETGNCIHT--LTG----HQSLTSGM-ELKDNILVSGNAD----STVKIW 344 (445)
T ss_dssp EEETTTCCEEEE--ECC----CCSCEEEE-EEETTEEEEEETT----SCEEEE
T ss_pred EEECCCCCEEEE--EcC----CcccEEEE-EEeCCEEEEEeCC----CeEEEE
Confidence 999987653321 111 11111222 3455566677665 355566
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.90 E-value=6.3e-08 Score=95.69 Aligned_cols=273 Identities=12% Similarity=0.137 Sum_probs=148.9
Q ss_pred CCCCCCChHH----HHHHhhccCCcccccccccccHhhhhhhccchhHHHHhhc--------------------------
Q 013797 88 YSFVPSLSDE----LEVLIVARVPRAEYWKFYLLNKRFLSLLKSGELFKIRREI-------------------------- 137 (436)
Q Consensus 88 ~~~~~~LPdd----l~~~ILarLP~~~l~~~~~Vck~w~~li~s~~f~~~~~~~-------------------------- 137 (436)
-.++..||+| |+..||+.|+..+|.++.+|||+|+.++.++.+++..-..
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 3457789999 9999999999999999999999999998877654421000
Q ss_pred -------------------------------Cc-----------cCCeE---------EEeccCCCeEEEEecCCCCeEe
Q 013797 138 -------------------------------GF-----------REPSV---------FMLASGDSSWWAFDRHFQTRRK 166 (436)
Q Consensus 138 -------------------------------~~-----------~~~~l---------~~~~~~~~~~~~~dp~~~~W~~ 166 (436)
+. ....+ ++.......+..||..+.+-..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~ 167 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR 167 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEE
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE
Confidence 00 00001 1111123456667766554332
Q ss_pred CCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCC
Q 013797 167 LPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSG 246 (436)
Q Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 246 (436)
.- ..+. .....+..++.+++.|+. ...+.+||..+++-... +........+..+++..++.|+.++
T Consensus 168 ~~--~~h~----~~v~~l~~~~~~l~sg~~--dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg---- 233 (435)
T 1p22_A 168 IL--TGHT----GSVLCLQYDERVIITGSS--DSTVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR---- 233 (435)
T ss_dssp EE--CCCS----SCEEEEECCSSEEEEEET--TSCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS----
T ss_pred EE--cCCC----CcEEEEEECCCEEEEEcC--CCeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC----
Confidence 21 1111 111123336666666653 35688999988764322 1111222233334555666666442
Q ss_pred ccceEEEEeCCCCCeEeC-CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCC
Q 013797 247 VLNSAERYNPETKSWDSL-PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGK 325 (436)
Q Consensus 247 ~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r 325 (436)
.+.+||..+..-... ..+........++..++...+.|+. -..+.+||+.+++-... +. ...
T Consensus 234 ---~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~--~~------~~~ 296 (435)
T 1p22_A 234 ---SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG------DRTIKVWNTSTCEFVRT--LN------GHK 296 (435)
T ss_dssp ---CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEET------TSEEEEEETTTCCEEEE--EE------CCS
T ss_pred ---cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeC------CCeEEEEECCcCcEEEE--Ec------CCC
Confidence 478889877642111 0111111122233346666666663 34688999987753221 11 011
Q ss_pred CCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 326 SPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 326 ~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
.....+..++.+++.|+..+.|.+||..+.+-.. .+.. ....+..+..++..++.|+.+ ..+.+|.
T Consensus 297 ~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~-----h~~~v~~~~~~~~~l~sg~~d----g~i~vwd 362 (435)
T 1p22_A 297 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR--VLEG-----HEELVRCIRFDNKRIVSGAYD----GKIKVWD 362 (435)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE--EECC-----CSSCEEEEECCSSEEEEEETT----SCEEEEE
T ss_pred CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEE--EEeC-----CcCcEEEEEecCCEEEEEeCC----CcEEEEE
Confidence 1122344467777888888899999998764322 1211 111133334577778888776 3566663
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.77 E-value=5.6e-07 Score=89.29 Aligned_cols=45 Identities=13% Similarity=0.224 Sum_probs=39.7
Q ss_pred CCCCCCChHHHHHHhhccCCcccccccccccHhhhhhhcc-chhHH
Q 013797 88 YSFVPSLSDELEVLIVARVPRAEYWKFYLLNKRFLSLLKS-GELFK 132 (436)
Q Consensus 88 ~~~~~~LPddl~~~ILarLP~~~l~~~~~Vck~w~~li~s-~~f~~ 132 (436)
-.++..||+|++.+||+.||.++|.++..|||+|+.++.+ +.+++
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~ 57 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWK 57 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHH
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3468889999999999999999999999999999999987 55443
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.67 E-value=8.3e-09 Score=70.00 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=39.4
Q ss_pred CCCCChHHHHHHhhccCCcccccccccccHhhhhhhccchhHH
Q 013797 90 FVPSLSDELEVLIVARVPRAEYWKFYLLNKRFLSLLKSGELFK 132 (436)
Q Consensus 90 ~~~~LPddl~~~ILarLP~~~l~~~~~Vck~w~~li~s~~f~~ 132 (436)
.|..||+|++..||++||..++.++++|||+|+.++.++.|++
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 5789999999999999999999999999999999999988764
No 23
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=1.5e-05 Score=71.61 Aligned_cols=187 Identities=17% Similarity=0.071 Sum_probs=122.4
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
+...++.+|+..|....+.+.++|+.|++-..--+++......+++..+++||++... .+.+++||+++.+-.
T Consensus 26 L~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-------~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 26 LFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-------NHEGFVYDLATLTPR 98 (243)
T ss_dssp EEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------SSEEEEEETTTTEEE
T ss_pred EEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-------CCEEEEEECCcCcEE
Confidence 5667899999999877789999999999876554555444556677789999998543 357999999876533
Q ss_pred eCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cC--CCCCCCCCCCCCCCCEEEEECCEEEE
Q 013797 263 SLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IP--DILKDFPAETGKSPPLIAVVNNELYS 339 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~--~~~~~~~~~~~r~~~~~~~~~g~lyv 339 (436)
...+.+..+.+.+.-++++|+..| .+.+..+|+++.+-.. ++ ..+. ..+..-.+...+|+||+
T Consensus 99 --~ti~~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~-----~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 99 --ARFRYPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGR-----PLDNLNELEWVNGELLA 164 (243)
T ss_dssp --EEEECSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEETTE-----ECCCEEEEEEETTEEEE
T ss_pred --EEEeCCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCc-----ccccceeeEEeCCEEEE
Confidence 222333344555655677888765 3568999999875422 22 1110 01111234556999997
Q ss_pred EecCCCeEEEEECCCCc---EEEcccCCCcc------CCCCCceEEEEEeCCEEEEEcCC
Q 013797 340 LETSSNELRVYLKDSNS---WKNLGLVPVRA------DFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~---W~~v~~~p~~~------~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
--...+.|.+.|+++++ |-.++.+.... ....-.|.+...-+++|||.|-.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 76668899999999975 44444332211 11122455654557899999864
No 24
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.37 E-value=1.8e-05 Score=71.79 Aligned_cols=188 Identities=10% Similarity=-0.035 Sum_probs=118.1
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
+...++.||+..|....+.+.++|+.|++-..--+++..-....++..+++||++... .+.+++||+++.+-.
T Consensus 48 L~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-------~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 48 FFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-------NGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------SSEEEEEETTTCCEE
T ss_pred EEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-------CCEEEEEECccCcEE
Confidence 4455899999999877789999999999865443444333344567789999999543 346999999987643
Q ss_pred eCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCC-CEEEEECCEEEEE
Q 013797 263 SLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSP-PLIAVVNNELYSL 340 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~-~~~~~~~g~lyv~ 340 (436)
. ..+.+-.+.+.+.-++.+|+..| .+.+..+|+++.+-.. ++-... . .+... -.+...+|+||+-
T Consensus 121 ~--ti~~~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~--g--~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 121 R--SFNYDGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH--G--EELPELNELEWVDGEIFAN 187 (262)
T ss_dssp E--EEECSSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET--T--EECCCEEEEEEETTEEEEE
T ss_pred E--EEECCCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC--C--ccccccceeEEECCEEEEE
Confidence 2 22222244455555667888754 3568999999875332 221100 0 01011 1245569999987
Q ss_pred ecCCCeEEEEECCCCc---EEEcccCCCc-----cCCCCCceEEEEEeCCEEEEEcCC
Q 013797 341 ETSSNELRVYLKDSNS---WKNLGLVPVR-----ADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 341 gg~~~~i~~yd~~~~~---W~~v~~~p~~-----~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
-...+.|.+.|+++++ |-.++.+... .....-.|.|+..-+++|||.|-.
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6668899999999976 3333322211 011122556655557899999854
No 25
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.35 E-value=1.6e-07 Score=86.80 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=45.0
Q ss_pred CCCCCCCChHHHHHHhhccCCccccc-ccccccHhhhhhhccchhHHHHhh
Q 013797 87 DYSFVPSLSDELEVLIVARVPRAEYW-KFYLLNKRFLSLLKSGELFKIRRE 136 (436)
Q Consensus 87 ~~~~~~~LPddl~~~ILarLP~~~l~-~~~~Vck~w~~li~s~~f~~~~~~ 136 (436)
+...+..||+||+.+||++||.++|. ++++|||+|+.|+.++.|+.....
T Consensus 47 ~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 47 AVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred cccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 34467899999999999999999999 999999999999999999887643
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.24 E-value=0.00019 Score=67.92 Aligned_cols=234 Identities=13% Similarity=0.047 Sum_probs=128.3
Q ss_pred CeEEEeccCCCeEEEEecCCCCeE-eCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRR-KLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR 219 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~-~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p 219 (436)
..+|+.......+.++|+.+.+-. .++....|. .++. .++.+|+... ....+.++|+.+++-...-+..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-------~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-------YIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-------EEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-------EEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcC
Confidence 446666555678899999988763 342221111 1333 6789999863 2468999999998754211111
Q ss_pred CC----CcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCccCCcceeEE-EECCEEEEEeccCCCC
Q 013797 220 RP----RCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMRQRRKLCSGC-YMDNKFYVIGGRNEKD 293 (436)
Q Consensus 220 ~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~-~~~g~iyv~gG~~~~~ 293 (436)
.. .....++..++++|+..-. ....+.++|+.+++... ++....+ ...+ .-+|++|+........
T Consensus 125 ~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 125 DMDMESGSTEQMVQYGKYVYVNCWS------YQNRILKIDTETDKVVDELTIGIQP---TSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp TCCTTTCBCCCEEEETTEEEEEECT------TCCEEEEEETTTTEEEEEEECSSCB---CCCEECTTSEEEEEBCCBCTT
T ss_pred CccccCCCcceEEEECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcCCCc---cceEEcCCCCEEEEECCCccC
Confidence 10 0122344478899998521 13469999999987543 2111111 1222 2368988875322111
Q ss_pred ----CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCcc
Q 013797 294 ----KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRA 367 (436)
Q Consensus 294 ----~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~ 367 (436)
.....+.++|+.+++....-.++ .......++.. ++.||+..+ .++++|+++++......++..
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~------~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~- 265 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFK------LGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFR- 265 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECC------TTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCC-
T ss_pred CccccCCceEEEEECCCCeEEEEEecC------CCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCC-
Confidence 01368999999988765432332 11122334444 457888754 899999998765322211110
Q ss_pred CCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCC
Q 013797 368 DFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPS 406 (436)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~ 406 (436)
...-.++++...+++||+....+...... ++.|+++
T Consensus 266 -~~~p~gi~vdp~~g~lyva~~~~y~~~~~--V~v~d~~ 301 (328)
T 3dsm_A 266 -DTKYYGLTVNPNNGEVYVADAIDYQQQGI--VYRYSPQ 301 (328)
T ss_dssp -SSCEEEEEECTTTCCEEEEECTTSSSEEE--EEEECTT
T ss_pred -CCceEEEEEcCCCCeEEEEcccccccCCE--EEEECCC
Confidence 12223344222478999987432222234 4444654
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.20 E-value=0.00052 Score=64.80 Aligned_cols=220 Identities=10% Similarity=-0.038 Sum_probs=125.7
Q ss_pred CCeEEEEecCCCCeEeCCCCC-CCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCE-EeCCCCCCCCcccEEE
Q 013797 151 DSSWWAFDRHFQTRRKLPELP-SDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNW-FKGPSMRRPRCLFASA 228 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W-~~l~~~p~~r~~~~~~ 228 (436)
...+..+|+.+++....-... ...........++..++++|+... ..+.+.++|+.|.+- ..++....| ..++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p---~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSP---RYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSE---EEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCC---cEEE
Confidence 567889999998875421100 000000001125567999999864 346899999999886 445332222 2333
Q ss_pred E-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-C--CCCc-cCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEE
Q 013797 229 T-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-L--PGMR-QRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 229 ~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~--~~~p-~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
. -++++|+.... ...+.++|+.+++-.. + +... ........++.++++|+..-. ..+.+.++|
T Consensus 91 ~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-----~~~~v~viD 158 (328)
T 3dsm_A 91 FLSDEKAYVTQIW-------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-----YQNRILKID 158 (328)
T ss_dssp EEETTEEEEEEBS-------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-----TCCEEEEEE
T ss_pred EeCCCeEEEEECC-------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-----CCCEEEEEE
Confidence 4 57899998642 2468999999887432 2 2200 000222344578999998520 245789999
Q ss_pred CCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCC----------CeEEEEECCCCcEEEcccCCCccCCCCC
Q 013797 304 EYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSS----------NELRVYLKDSNSWKNLGLVPVRADFNRG 372 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~----------~~i~~yd~~~~~W~~v~~~p~~~~~~~~ 372 (436)
+.+++....-+... .+ ..++. -+|++|+..... +.|.++|+++.+....-.++.. ...
T Consensus 159 ~~t~~~~~~i~~g~-----~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g---~~p 227 (328)
T 3dsm_A 159 TETDKVVDELTIGI-----QP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG---DWP 227 (328)
T ss_dssp TTTTEEEEEEECSS-----CB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT---CCC
T ss_pred CCCCeEEEEEEcCC-----Cc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC---CCc
Confidence 99987544222211 11 12232 368988886432 6899999998876543223221 122
Q ss_pred ceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCC
Q 013797 373 WGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSS 407 (436)
Q Consensus 373 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~ 407 (436)
.++++..-++.||+..+ .+|.+|+++
T Consensus 228 ~~la~~~d~~~lyv~~~---------~v~~~d~~t 253 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN---------DIWRMPVEA 253 (328)
T ss_dssp EEEEECTTSCEEEEESS---------SEEEEETTC
T ss_pred eeEEEecCCCEEEEEcc---------EEEEEECCC
Confidence 33443223678888754 255556654
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.98 E-value=0.00013 Score=66.30 Aligned_cols=187 Identities=10% Similarity=-0.051 Sum_probs=112.9
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
+...++.||+..|... .+.++|+.|++-..-- ++..-....++..+++||++... .+.+++||+++.+-.
T Consensus 60 L~~~~~~Ly~stG~~g--~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-------~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 60 LVFHQGHFFESTGHQG--TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-------EGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEETTEEEEEETTTT--EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-------SCEEEEEETTTTEEE
T ss_pred EEEECCEEEEEcCCCC--EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-------CCEEEEEECCcCcEE
Confidence 4556899999887543 3999999999743222 44332334567779999998543 346999999887543
Q ss_pred eCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEec
Q 013797 263 SLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLET 342 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg 342 (436)
...+.+-.+.+.+.-+++||+..| .+.+..+|+++.+-..--.... .+. .....-.+...+|+||+--.
T Consensus 130 --~ti~~~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~-~g~-~v~~lNeLe~~dG~lyanvw 198 (268)
T 3nok_A 130 --RTTRYSGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKL-RGQ-PVELINELECANGVIYANIW 198 (268)
T ss_dssp --EEEECSSCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEE-TTE-ECCCEEEEEEETTEEEEEET
T ss_pred --EEEeCCCceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCC-CCc-ccccccccEEeCCEEEEEEC
Confidence 222222334566677888999865 4578999999875432111110 000 00011224456999997665
Q ss_pred CCCeEEEEECCCCc---EEEcccCCC------ccCCCCCceEEEEEeCCEEEEEcCC
Q 013797 343 SSNELRVYLKDSNS---WKNLGLVPV------RADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 343 ~~~~i~~yd~~~~~---W~~v~~~p~------~~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
..+.|.+.|+++++ |-.++.+.. ......-.|.|...-+++|||.|-.
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 67899999999975 444432211 0011122445543446889998854
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.97 E-value=0.0079 Score=57.43 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=113.4
Q ss_pred CCCeEEEEecCCCC--eEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCC---
Q 013797 150 GDSSWWAFDRHFQT--RRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPR--- 222 (436)
Q Consensus 150 ~~~~~~~~dp~~~~--W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r--- 222 (436)
....+++||+.+++ |..-...+.... ......+..++.||+.. ....++.+|+.+++ |+.-...+...
T Consensus 151 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~--~~~~~~~~~~~~v~~g~---~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 225 (376)
T 3q7m_A 151 SNGQLQALNEADGAVKWTVNLDMPSLSL--RGESAPTTAFGAAVVGG---DNGRVSAVLMEQGQMIWQQRISQATGSTEI 225 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEECC---TTTEEEEEETTTCCEEEEEECCC-------
T ss_pred CCCeEEEEECCCCcEEEEEeCCCCceee--cCCCCcEEECCEEEEEc---CCCEEEEEECCCCcEEEEEecccCCCCccc
Confidence 35678999998776 765332221100 00112345578877742 23479999998886 76543322111
Q ss_pred -----cccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCccCCcceeEEEECCEEEEEeccCCCCCc
Q 013797 223 -----CLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKP 295 (436)
Q Consensus 223 -----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~ 295 (436)
.....+..++.+|+.+. + ..+..+|+.+++ |+.-... ....+..++.||+...
T Consensus 226 ~~~~~~~~~p~~~~~~v~~~~~-~-------g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~l~~~~~------- 285 (376)
T 3q7m_A 226 DRLSDVDTTPVVVNGVVFALAY-N-------GNLTALDLRSGQIMWKRELGS-----VNDFIVDGNRIYLVDQ------- 285 (376)
T ss_dssp ----CCCCCCEEETTEEEEECT-T-------SCEEEEETTTCCEEEEECCCC-----EEEEEEETTEEEEEET-------
T ss_pred ccccccCCCcEEECCEEEEEec-C-------cEEEEEECCCCcEEeeccCCC-----CCCceEECCEEEEEcC-------
Confidence 11233445888888752 1 247889998875 7754211 2345567899999763
Q ss_pred CCEEEEEECCCCc--EEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc--EEEcccCCCccCCCC
Q 013797 296 LTCGEAYDEYAGT--WYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS--WKNLGLVPVRADFNR 371 (436)
Q Consensus 296 ~~~v~~yD~~~~~--W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~--W~~v~~~p~~~~~~~ 371 (436)
...+.+||+.+++ |+.-. .. .......++.++.||+.. ..+.++++|+++.+ |+.- ++.. ..
T Consensus 286 ~g~l~~~d~~tG~~~w~~~~-~~-------~~~~~~~~~~~~~l~v~~-~~g~l~~~d~~tG~~~~~~~--~~~~---~~ 351 (376)
T 3q7m_A 286 NDRVMALTIDGGVTLWTQSD-LL-------HRLLTSPVLYNGNLVVGD-SEGYLHWINVEDGRFVAQQK--VDSS---GF 351 (376)
T ss_dssp TCCEEEEETTTCCEEEEECT-TT-------TSCCCCCEEETTEEEEEC-TTSEEEEEETTTCCEEEEEE--CCTT---CB
T ss_pred CCeEEEEECCCCcEEEeecc-cC-------CCcccCCEEECCEEEEEe-CCCeEEEEECCCCcEEEEEe--cCCC---cc
Confidence 2358999998874 76532 11 111122356788988764 35689999998875 5542 2111 11
Q ss_pred CceEEEEEeCCEEEEEcC
Q 013797 372 GWGIAFKSLGNELLVIGA 389 (436)
Q Consensus 372 ~~~~~~~~~~~~l~v~GG 389 (436)
....+ ..+++||+...
T Consensus 352 ~~~~~--~~~~~l~v~~~ 367 (376)
T 3q7m_A 352 QTEPV--AADGKLLIQAK 367 (376)
T ss_dssp CSCCE--EETTEEEEEBT
T ss_pred eeCCE--EECCEEEEEeC
Confidence 11122 56888888653
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.91 E-value=0.00056 Score=62.53 Aligned_cols=190 Identities=12% Similarity=-0.005 Sum_probs=112.6
Q ss_pred eEEeC-CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 183 SLCAG-THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 183 ~~~~~-~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
++..+ +.+|+..|....+.+.++|+.|++-..--+++.......++..++++|+..-. .+.+.+||+.+.+=
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------~~~v~viD~~t~~v 98 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------KNIGFIYDRRTLSN 98 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-------CSEEEEEETTTTEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-------CCEEEEEECCCCcE
Confidence 34444 89999877666789999999999855433333322334566678899999542 34699999987642
Q ss_pred EeCCCCccC-CcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEE-EcCCCCCCCCCCCCCCCCEEEEECCEEEE
Q 013797 262 DSLPGMRQR-RKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY-HIPDILKDFPAETGKSPPLIAVVNNELYS 339 (436)
Q Consensus 262 ~~~~~~p~~-r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~-~v~~~~~~~~~~~~r~~~~~~~~~g~lyv 339 (436)
+...+.+ -.+.+.+.-++++|+..| .+.+.++|+++.+=. .++--.. ..+. ...-.+...+|+||+
T Consensus 99 --~~~i~~g~~~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~--~~p~-~~~nele~~dg~lyv 166 (266)
T 2iwa_A 99 --IKNFTHQMKDGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN--GHRV-IRLNELEYINGEVWA 166 (266)
T ss_dssp --EEEEECCSSSCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET--TEEC-CCEEEEEEETTEEEE
T ss_pred --EEEEECCCCCeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC--Cccc-ccceeEEEECCEEEE
Confidence 2222222 223334444567887653 457899999886532 2221100 0000 011234455899998
Q ss_pred EecCCCeEEEEECCCCc---EEEcccCCC------ccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 340 LETSSNELRVYLKDSNS---WKNLGLVPV------RADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~---W~~v~~~p~------~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
-....+.|.+.|+++++ |-.++.+.. ......-.|+++..-++++||.|+..
T Consensus 167 n~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp EETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 87667899999999874 333321100 00011224566545577999999775
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.84 E-value=0.02 Score=54.56 Aligned_cols=233 Identities=12% Similarity=0.090 Sum_probs=125.9
Q ss_pred CeEEEeccCCCeEEEEecCCCC--eEeCCCCCCCC--C-ccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EEe
Q 013797 142 PSVFMLASGDSSWWAFDRHFQT--RRKLPELPSDP--C-FKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WFK 214 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~--~-~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~ 214 (436)
..+|+.. ....+++||+.+++ |..-....... . ........+..++.||+... ...++.+|+.|++ |+.
T Consensus 54 ~~v~~~~-~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 54 NVVYAAD-RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp TEEEEEC-TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEETTTCCEEEEE
T ss_pred CEEEEEc-CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEECCCCCEEEEE
Confidence 3344433 24578899997765 65432211100 0 00111224566888988642 3579999999887 765
Q ss_pred CCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCcc--CCcceeEEEECCEEEEEeccC
Q 013797 215 GPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQ--RRKLCSGCYMDNKFYVIGGRN 290 (436)
Q Consensus 215 l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~g~iyv~gG~~ 290 (436)
-..-. .....+..++.+|+... ...+..||+.+++ |+.-...+. .+.....++.++.+|+-.
T Consensus 130 ~~~~~---~~~~p~~~~~~v~v~~~--------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~--- 195 (376)
T 3q7m_A 130 KVAGE---ALSRPVVSDGLVLIHTS--------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGG--- 195 (376)
T ss_dssp ECSSC---CCSCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECC---
T ss_pred eCCCc---eEcCCEEECCEEEEEcC--------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEc---
Confidence 32211 11223445888887643 1258999998876 875432221 122234456688887732
Q ss_pred CCCCcCCEEEEEECCCC--cEEEcCCCCCCCCC-C-CCCCCCEEEEECCEEEEEecCCCeEEEEECCCC--cEEEcccCC
Q 013797 291 EKDKPLTCGEAYDEYAG--TWYHIPDILKDFPA-E-TGKSPPLIAVVNNELYSLETSSNELRVYLKDSN--SWKNLGLVP 364 (436)
Q Consensus 291 ~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~-~-~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~--~W~~v~~~p 364 (436)
....+.+||+.++ .|+.-...+..... . ........++.++.+|+.+ ..+.+.++|++++ .|+.- .+
T Consensus 196 ----~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~-~~g~l~~~d~~tG~~~w~~~--~~ 268 (376)
T 3q7m_A 196 ----DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA-YNGNLTALDLRSGQIMWKRE--LG 268 (376)
T ss_dssp ----TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC-TTSCEEEEETTTCCEEEEEC--CC
T ss_pred ----CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe-cCcEEEEEECCCCcEEeecc--CC
Confidence 2346899999876 57764332210000 0 0001122345688888874 4578999999876 47653 11
Q ss_pred CccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEE
Q 013797 365 VRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRL 416 (436)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~ 416 (436)
. . ..++..++.||+..... . ++.+++.+ ++..|+.
T Consensus 269 ~------~--~~~~~~~~~l~~~~~~g-----~--l~~~d~~t--G~~~w~~ 303 (376)
T 3q7m_A 269 S------V--NDFIVDGNRIYLVDQND-----R--VMALTIDG--GVTLWTQ 303 (376)
T ss_dssp C------E--EEEEEETTEEEEEETTC-----C--EEEEETTT--CCEEEEE
T ss_pred C------C--CCceEECCEEEEEcCCC-----e--EEEEECCC--CcEEEee
Confidence 1 1 22336788999876432 2 44445542 3456765
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.76 E-value=0.0071 Score=54.46 Aligned_cols=220 Identities=14% Similarity=0.014 Sum_probs=113.2
Q ss_pred EEE-eccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC
Q 013797 144 VFM-LASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP 221 (436)
Q Consensus 144 l~~-~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~ 221 (436)
+++ .......+..||+.+.....+....... .. .++. .++.||+... ...+++||+.++....+.....
T Consensus 37 l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--p~---~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~~~- 107 (270)
T 1rwi_B 37 VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQ--PQ---GLAVDGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFDGL- 107 (270)
T ss_dssp EEEEECSSSCEEEEECC-----EECCCCSCCS--CC---CEEECTTCCEEEEET---TTEEEEECTTCSCCEECCCCSC-
T ss_pred EEEEccCCCCcEEEecCCCcccceEeeCCcCC--cc---eeEECCCCCEEEEcC---CCEEEEEeCCCceEeeeecCCc-
Confidence 555 3234567888888766544432211111 11 1333 3567888754 4579999998876554432111
Q ss_pred CcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEE
Q 013797 222 RCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 222 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v 299 (436)
.....++.- ++.+|+.... ...+.+||..+........... ..-.+.++. +|++|+... ....+
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~~i 173 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT------DNNRV 173 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGG-------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG------GGTEE
T ss_pred CCCcceEECCCCCEEEEECC-------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC------CCCEE
Confidence 112233333 6788887542 2357888877665443321111 111223333 578998764 23568
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEE
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFK 378 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~ 378 (436)
.+||+.+..-....... .....++++. +|.||+.....+.|.+||+.+..-..... .. ...-.++++
T Consensus 174 ~~~~~~~~~~~~~~~~~-------~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~---~~~p~~i~~- 241 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTD-------ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF-TG---LNTPLAVAV- 241 (270)
T ss_dssp EEECTTTCCEEECCCSS-------CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC-CS---CSCEEEEEE-
T ss_pred EEEecCCCceEeecccC-------CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc-CC---CCCceeEEE-
Confidence 99999877644332111 0111233333 46899987667789999998754333211 10 011122332
Q ss_pred EeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 379 SLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 379 ~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
..+|+||+....+ ..+.+|.
T Consensus 242 ~~~g~l~v~~~~~----~~v~~~~ 261 (270)
T 1rwi_B 242 DSDRTVYVADRGN----DRVVKLT 261 (270)
T ss_dssp CTTCCEEEEEGGG----TEEEEEC
T ss_pred CCCCCEEEEECCC----CEEEEEc
Confidence 2356788886554 3566663
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.75 E-value=0.001 Score=59.63 Aligned_cols=119 Identities=11% Similarity=-0.050 Sum_probs=83.8
Q ss_pred CCCCCccc--EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCc
Q 013797 218 MRRPRCLF--ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKP 295 (436)
Q Consensus 218 ~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~ 295 (436)
.|+....+ .....++.+|+..|..+ .+.+.++|+++++=..--+++..-.+.+.+..+++||+... .
T Consensus 15 ~phd~~~ftqGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw------~ 83 (243)
T 3mbr_X 15 YPHDTTAFTEGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW------R 83 (243)
T ss_dssp EECCTTCCEEEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------S
T ss_pred cCCCCccccccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe------e
Confidence 34454444 55566899999998754 34689999999986543344444445667788999999975 3
Q ss_pred CCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 296 LTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 296 ~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+.+++||+++.+- +..++. +..+.+++..+++||+..| .+.|+.+|+++.+
T Consensus 84 ~~~v~v~D~~tl~~--~~ti~~------~~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~ 135 (243)
T 3mbr_X 84 NHEGFVYDLATLTP--RARFRY------PGEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQ 135 (243)
T ss_dssp SSEEEEEETTTTEE--EEEEEC------SSCCCEEEECSSCEEEECS-SSEEEEECTTTCC
T ss_pred CCEEEEEECCcCcE--EEEEeC------CCCceEEeeCCCEEEEECC-CCeEEEEeCCCCe
Confidence 56789999987653 333331 2245677776778999987 7889999999864
No 34
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.51 E-value=0.015 Score=56.82 Aligned_cols=225 Identities=12% Similarity=0.101 Sum_probs=114.9
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
....+..||..+.+-...- ..+. .....+..++..++.|+. ...+.+||+.+.+-... +........+..
T Consensus 217 ~dg~i~~wd~~~~~~~~~~--~~~~----~~v~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~ 286 (445)
T 2ovr_B 217 RDATLRVWDIETGQCLHVL--MGHV----AAVRCVQYDGRRVVSGAY--DFMVKVWDPETETCLHT--LQGHTNRVYSLQ 286 (445)
T ss_dssp TTSEEEEEESSSCCEEEEE--ECCS----SCEEEEEECSSCEEEEET--TSCEEEEEGGGTEEEEE--ECCCSSCEEEEE
T ss_pred CCCEEEEEECCCCcEEEEE--cCCc----ccEEEEEECCCEEEEEcC--CCEEEEEECCCCcEeEE--ecCCCCceEEEE
Confidence 4567788888766543211 1111 011123335556666653 35688899877653221 111112223333
Q ss_pred eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcE
Q 013797 230 CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTW 309 (436)
Q Consensus 230 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W 309 (436)
+++..++.|+.++ .+.+||..+.+-... +........+...++.+++.|+.+ ..+..||+.+++-
T Consensus 287 ~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~ 351 (445)
T 2ovr_B 287 FDGIHVVSGSLDT-------SIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD------STVKIWDIKTGQC 351 (445)
T ss_dssp ECSSEEEEEETTS-------CEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT------SCEEEEETTTCCE
T ss_pred ECCCEEEEEeCCC-------eEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC------CeEEEEECCCCcE
Confidence 4666666666542 488899987763321 111111222334456666666633 3578999977653
Q ss_pred EEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcc-cCCCccCCCCCceEEEEEeCCEEEEEc
Q 013797 310 YHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLG-LVPVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 310 ~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
...-..+. ........+..++.+++.|+..+.|.+||..+.+....- .............+++ ..++.++++|
T Consensus 352 ~~~~~~~~-----~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~la~~ 425 (445)
T 2ovr_B 352 LQTLQGPN-----KHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA-SNTKLVCAVG 425 (445)
T ss_dssp EEEECSTT-----SCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEE-CSSEEEEEEE
T ss_pred EEEEccCC-----CCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEe-cCCEEEEEEc
Confidence 22211110 111222334557788888888899999999987654321 1111111111111221 2345666777
Q ss_pred CCCCCCCCcEEEEeecC
Q 013797 389 ASSTSSHESMAIYTCCP 405 (436)
Q Consensus 389 G~~~~~~~~~~~y~~~p 405 (436)
+.++.....+.+|.|++
T Consensus 426 ~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 426 SRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CSSSSSCCEEEEEECCC
T ss_pred ccCCCCccEEEEEECCC
Confidence 77654445677775554
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.49 E-value=0.056 Score=49.01 Aligned_cols=229 Identities=10% Similarity=0.081 Sum_probs=115.8
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP 221 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~ 221 (436)
+++.......+..||+.......++..............++. .++.+|+.+.. ....+.+||+....-..+.....
T Consensus 43 l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-~~~~i~~~d~~g~~~~~~~~~~~- 120 (286)
T 1q7f_A 43 IIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-PTHQIQIYNQYGQFVRKFGATIL- 120 (286)
T ss_dssp EEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-GGCEEEEECTTSCEEEEECTTTC-
T ss_pred EEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-CCCEEEEECCCCcEEEEecCccC-
Confidence 444433345688888875433333321111000001112333 47889987632 13578999965444333322111
Q ss_pred CcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCE
Q 013797 222 RCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTC 298 (436)
Q Consensus 222 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~ 298 (436)
.....++. -++.+|+.... ...+.+||+.......+.... .......+.+ +|++|+... ..+.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~------~~~~ 186 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECK-------VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDN------RAHC 186 (286)
T ss_dssp SCEEEEEECTTSCEEEEETT-------TTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEG------GGTE
T ss_pred CCceEEEEeCCCCEEEEECC-------CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEEC------CCCE
Confidence 11123333 26788887542 235888997655443332111 1112223333 588998764 2457
Q ss_pred EEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCC-eEEEEECCCCcEEEcccCCCccCCCCCceEE
Q 013797 299 GEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSN-ELRVYLKDSNSWKNLGLVPVRADFNRGWGIA 376 (436)
Q Consensus 299 v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~-~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~ 376 (436)
+.+||+.......+.... ......++++. +|.||+.+...+ .|.+||++.+.-..+..-.. ...-.+++
T Consensus 187 i~~~~~~g~~~~~~~~~g------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~---~~~~~~i~ 257 (286)
T 1q7f_A 187 VKVFNYEGQYLRQIGGEG------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK---HAQCFDVA 257 (286)
T ss_dssp EEEEETTCCEEEEESCTT------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC---CSCEEEEE
T ss_pred EEEEcCCCCEEEEEccCC------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC---CCcceeEE
Confidence 899998766544443211 00111233332 578999886665 89999987654444432110 01112333
Q ss_pred EEEeCCEEEEEcCCCCCCCCcEEEEee
Q 013797 377 FKSLGNELLVIGASSTSSHESMAIYTC 403 (436)
Q Consensus 377 ~~~~~~~l~v~GG~~~~~~~~~~~y~~ 403 (436)
+ .-+++||+.. .+ ..+.+|.+
T Consensus 258 ~-~~~g~l~vs~-~~----~~v~v~~~ 278 (286)
T 1q7f_A 258 L-MDDGSVVLAS-KD----YRLYIYRY 278 (286)
T ss_dssp E-ETTTEEEEEE-TT----TEEEEEEC
T ss_pred E-CCCCcEEEEC-CC----CeEEEEEc
Confidence 2 3467898884 23 46777743
No 36
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.48 E-value=0.044 Score=51.03 Aligned_cols=210 Identities=8% Similarity=-0.029 Sum_probs=107.5
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC--------
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP-------- 221 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~-------- 221 (436)
...++.+|+.+.+-...-+..... .. ..... ++.+|+.+. ....++++|+.+++-...-+....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~--~~---~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 140 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKP--FG---ATINNTTQTLWFGNT--VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRP 140 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC--CS---EEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEEESCCCCCCSSCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCCc--ce---EEECCCCCEEEEEec--CCCEEEEEeCCCCeeEEEEecCCCccccccCC
Confidence 457889999887654332222111 11 12333 456887754 235899999999874322111111
Q ss_pred CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-C-CEEEEEeccCCCCCcCC
Q 013797 222 RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-D-NKFYVIGGRNEKDKPLT 297 (436)
Q Consensus 222 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~-g~iyv~gG~~~~~~~~~ 297 (436)
.....++.. ++.+|+.+... ...+.++|+.+.+-...-+. ........++. + ..+|+... ..
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-------~~ 206 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGK------ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-------DG 206 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESS------SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-------TS
T ss_pred CCCceEEECCCCCEEEEEecCC------CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-------CC
Confidence 111223332 45677776321 23589999987764322111 11111222222 4 45666542 34
Q ss_pred EEEEEECCCCcEEEcCCCCCCCCCCCCCCC-CEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCce
Q 013797 298 CGEAYDEYAGTWYHIPDILKDFPAETGKSP-PLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWG 374 (436)
Q Consensus 298 ~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~-~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~ 374 (436)
.+.+||+.+++-......... .+... ..++.. ++.+|+.+...+.|.+||+.+.+-...-..+. ..+
T Consensus 207 ~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~ 276 (353)
T 3vgz_A 207 ELITIDTADNKILSRKKLLDD----GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE------SLA 276 (353)
T ss_dssp EEEEEETTTTEEEEEEECCCS----SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS------CCC
T ss_pred eEEEEECCCCeEEEEEEcCCC----CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC------Cce
Confidence 688999988754332222110 01111 123333 44688877666899999998876544322222 123
Q ss_pred EEEEEeCCEEEEEcCCC
Q 013797 375 IAFKSLGNELLVIGASS 391 (436)
Q Consensus 375 ~~~~~~~~~l~v~GG~~ 391 (436)
+++..-++.||+.+..+
T Consensus 277 ~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQA 293 (353)
T ss_dssp EEEETTTTEEEEEETTT
T ss_pred EEECCCCCEEEEEECCC
Confidence 44434455688876544
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.47 E-value=0.031 Score=50.70 Aligned_cols=210 Identities=10% Similarity=0.025 Sum_probs=108.8
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPR 222 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r 222 (436)
+++.......++.||+. ++...+. ++...... ..++. .++.+|+... ....++++|+ +++...........
T Consensus 70 l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~---~~i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~ 141 (299)
T 2z2n_A 70 VWFTENAANKIGRITKK-GIIKEYT-LPNPDSAP---YGITEGPNGDIWFTEM--NGNRIGRITD-DGKIREYELPNKGS 141 (299)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCE---EEEEECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSSTTC
T ss_pred EEEeCCCCCeEEEECCC-CcEEEEe-CCCcCCCc---eeeEECCCCCEEEEec--CCceEEEECC-CCCEEEecCCCCCC
Confidence 44443334567888876 4444332 12111111 11222 3678888642 2457999999 66665442111111
Q ss_pred cccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEE
Q 013797 223 CLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 223 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v 299 (436)
....++.- ++.+|+.... ...+.+||+ +++..... .+..........+ +|+||+... ..+.+
T Consensus 142 ~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~------~~~~i 206 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQ-------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEI------IGNKI 206 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TTTEE
T ss_pred CCceEEEcCCCCEEEEeCC-------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEcc------CCceE
Confidence 12233332 5688886431 235889999 77776541 1111112223333 577888753 23568
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEE
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFK 378 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~ 378 (436)
.+||+ +++...+.. +. ......+++.. +|.||+.....+.|.+||+ +.+...+. ++.. ...-.+++
T Consensus 207 ~~~~~-~g~~~~~~~-~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~-~~~~--~~~~~~i~-- 273 (299)
T 2z2n_A 207 GRITT-SGEITEFKI-PT-----PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP-IQIK--SAEPHGIC-- 273 (299)
T ss_dssp EEECT-TCCEEEEEC-SS-----TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE-CSSS--SCCEEEEE--
T ss_pred EEECC-CCcEEEEEC-CC-----CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEe-CCCC--CCccceEE--
Confidence 99999 777765421 10 01111223332 5789988755688999999 45544442 1211 11122333
Q ss_pred EeCCEEEEEcC
Q 013797 379 SLGNELLVIGA 389 (436)
Q Consensus 379 ~~~~~l~v~GG 389 (436)
..++.||+...
T Consensus 274 ~~~g~l~v~~~ 284 (299)
T 2z2n_A 274 FDGETIWFAME 284 (299)
T ss_dssp ECSSCEEEEET
T ss_pred ecCCCEEEEec
Confidence 36778888754
No 38
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.42 E-value=0.0017 Score=61.15 Aligned_cols=227 Identities=16% Similarity=0.101 Sum_probs=110.2
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC-CCcccEEEEe-
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR-PRCLFASATC- 230 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~-~r~~~~~~~~- 230 (436)
.++.+|+.+++...+........... .+..-++.||+.+.......+++||..+++++.+..+.. ...-..++..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~---~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTY---LALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCC---EEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcce---EEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 46677888887765432221111111 133447778877643334689999998888776654221 1111223322
Q ss_pred CC-EEEEEcCcCCCCCCccceEEEEeCC-CCCeEeCCCC------ccCCc---ceeEEEE--CCEEEEEeccCCCCCcCC
Q 013797 231 GT-FAFVAGGHGMDGSGVLNSAERYNPE-TKSWDSLPGM------RQRRK---LCSGCYM--DNKFYVIGGRNEKDKPLT 297 (436)
Q Consensus 231 ~~-~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~~~~~------p~~r~---~~~~~~~--~g~iyv~gG~~~~~~~~~ 297 (436)
++ .+|+.+..+ ..+.+||.. +++.+.+... |..|. ....+.+ +|++|+.+. ..+
T Consensus 96 dg~~l~~~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~------~~~ 162 (347)
T 3hfq_A 96 ARQLVYSANYHK-------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL------GSD 162 (347)
T ss_dssp TTTEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET------TTT
T ss_pred CCCEEEEEeCCC-------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC------CCC
Confidence 34 577765321 347777774 3344332111 11111 1112222 677777653 234
Q ss_pred EEEEEECC-CCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCE-EEEEecCCCeEEEEECC--CCcEEEcccCCCccCC--
Q 013797 298 CGEAYDEY-AGTWYHIPDILKDFPAETGKSPPLIAVV--NNE-LYSLETSSNELRVYLKD--SNSWKNLGLVPVRADF-- 369 (436)
Q Consensus 298 ~v~~yD~~-~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~-lyv~gg~~~~i~~yd~~--~~~W~~v~~~p~~~~~-- 369 (436)
.+.+||+. +++...+...... .. ..+..+.+ +|+ ||+.+...+.+.+|+.. +++++.+..+...+..
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~----~g-~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTME----AG-FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECC----TT-CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred EEEEEEECCCCcEEEeeeEEcC----CC-CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 68889987 5665544321100 01 11112222 454 88877666777777665 5676655432221110
Q ss_pred --CCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeec
Q 013797 370 --NRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCC 404 (436)
Q Consensus 370 --~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~ 404 (436)
....++++..-|..||+.+..+ ..+.+|.++
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~----~~v~v~~~~ 270 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGY----NTLAVFAVT 270 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETT----TEEEEEEEC
T ss_pred CCCcceeEEECCCCCEEEEEeCCC----CEEEEEEEC
Confidence 1111233222234577765443 356677433
No 39
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.34 E-value=0.072 Score=49.55 Aligned_cols=219 Identities=11% Similarity=0.023 Sum_probs=111.7
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCC---ccCC-CeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPC---FKLG-DKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKG 215 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~---~~~~-~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l 215 (436)
..+++.......+..+|+.+.+-...-+...... .... ...++. .++.+|+.+. .....++++|+.+.+-...
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~~~~~~~ 179 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGNIKLKTA 179 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTTTEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCCCceEEE
Confidence 3455555555788999998876533222221110 0000 011222 2566777653 2345799999998874332
Q ss_pred CCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC-cc-CCcce-eEEEE--CCEEEEEec
Q 013797 216 PSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM-RQ-RRKLC-SGCYM--DNKFYVIGG 288 (436)
Q Consensus 216 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~-~r~~~-~~~~~--~g~iyv~gG 288 (436)
-+.... ....++. -+..+|+... ...+.+||+.+++-...-.. .. +.... ..++. ++.+|+...
T Consensus 180 ~~~~~~-~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 180 IQNTGK-MSTGLALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp ECCCCT-TCCCCEEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred ecCCCC-ccceEEECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 221111 1112222 2456777643 13578899988763321111 11 11122 23333 445777653
Q ss_pred cCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCcEEEcccCCCc
Q 013797 289 RNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSNSWKNLGLVPVR 366 (436)
Q Consensus 289 ~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~ 366 (436)
..+.+.+||+.+++....-..+ .+ ..++.. +| .+|+.+...+.|.+||..+.+-...-..+.
T Consensus 251 ------~~~~v~~~d~~~~~~~~~~~~~------~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~- 314 (353)
T 3vgz_A 251 ------KAAEVLVVDTRNGNILAKVAAP------ES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT- 314 (353)
T ss_dssp ------SSSEEEEEETTTCCEEEEEECS------SC---CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-
T ss_pred ------CCCEEEEEECCCCcEEEEEEcC------CC---ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-
Confidence 2467899999888754433332 11 123332 44 588887667899999998876544322221
Q ss_pred cCCCCCceEEEEEeCCEEEEEcCC
Q 013797 367 ADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 367 ~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
...++++..-+..||+.+..
T Consensus 315 ----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 315 ----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ----EEEEEEECTTSCEEEEEEEC
T ss_pred ----CCCeEEEcCCCCEEEEEEcc
Confidence 11233432234457776544
No 40
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.27 E-value=0.042 Score=50.79 Aligned_cols=244 Identities=10% Similarity=0.066 Sum_probs=117.0
Q ss_pred CeEEEeccCCCeEEEEecC--CCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECCCCC-EEeCCC
Q 013797 142 PSVFMLASGDSSWWAFDRH--FQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELETNN-WFKGPS 217 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~--~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~ 217 (436)
..+++.......+..|+.. ++++..+..++..... . .....- +..||+.+. ....+.+||...++ ...+..
T Consensus 50 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~ 124 (343)
T 1ri6_A 50 RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL-T--HISTDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDV 124 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC-S--EEEECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEE
T ss_pred CEEEEeecCCCeEEEEEecCCCCceeeccccccCCCC-c--EEEEcCCCCEEEEEec--CCCeEEEEECCCCcccccccc
Confidence 3444444433567777665 6676655433322211 1 112222 445666543 23568888873222 222211
Q ss_pred CCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCC-CCeEeCC--C--CccCCcceeEEEE--CC-EEEEEe
Q 013797 218 MRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPET-KSWDSLP--G--MRQRRKLCSGCYM--DN-KFYVIG 287 (436)
Q Consensus 218 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~--~--~p~~r~~~~~~~~--~g-~iyv~g 287 (436)
.......+.++.. +..+|+.+..+ ..+.+||..+ ++...+. . .+.. .....+.+ ++ .+|+.+
T Consensus 125 ~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 125 VEGLDGCHSANISPDNRTLWVPALKQ-------DRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp ECCCTTBCCCEECTTSSEEEEEEGGG-------TEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEE
T ss_pred ccCCCCceEEEECCCCCEEEEecCCC-------CEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEe
Confidence 1211112222222 34677765322 3588899887 6664322 1 1111 11112222 44 477765
Q ss_pred ccCCCCCcCCEEEEEECC--CCcEEE---cCCCCCCCCCCCCCCCC-EEEEE-CC-EEEEEecCCCeEEEEECC--CCcE
Q 013797 288 GRNEKDKPLTCGEAYDEY--AGTWYH---IPDILKDFPAETGKSPP-LIAVV-NN-ELYSLETSSNELRVYLKD--SNSW 357 (436)
Q Consensus 288 G~~~~~~~~~~v~~yD~~--~~~W~~---v~~~~~~~~~~~~r~~~-~~~~~-~g-~lyv~gg~~~~i~~yd~~--~~~W 357 (436)
. ....+.+||+. ++++.. +..++... .....+ .++.. +| .||+.+...+.+.+||.. ++++
T Consensus 197 ~------~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 197 E------LNSSVDVWELKDPHGNIECVQTLDMMPENF---SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL 267 (343)
T ss_dssp T------TTTEEEEEESSCTTSCCEEEEEEECSCTTC---CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE
T ss_pred C------CCCEEEEEEecCCCCcEEEEeeccccCccc---cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce
Confidence 4 23467888884 444432 22233110 011112 22222 34 677776567889999987 5677
Q ss_pred EEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEee
Q 013797 358 KNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 358 ~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
+.+..++.... ..++++..-+..||+.++.+ ..+.+|.+++++. .++.+.
T Consensus 268 ~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~----~~v~v~~~d~~~g----~~~~~~ 317 (343)
T 1ri6_A 268 SKEGFQPTETQ---PRGFNVDHSGKYLIAAGQKS----HHISVYEIVGEQG----LLHEKG 317 (343)
T ss_dssp EEEEEEECSSS---CCCEEECTTSSEEEEECTTT----CEEEEEEEETTTT----EEEEEE
T ss_pred EEeeeecCCCc---cceEEECCCCCEEEEecCCC----CeEEEEEEcCCCc----eeeEcc
Confidence 77765443211 22344323344566665443 4677887665433 566665
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.012 Score=55.36 Aligned_cols=235 Identities=11% Similarity=0.122 Sum_probs=114.9
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-C--CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-G--THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFA 226 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~--~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~ 226 (436)
....+..||....++..+..+..+.... .++... . +.+++.|+. ...+.+||..+++|..+..+........
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~ 105 (379)
T 3jrp_A 31 SDKTIKIFEVEGETHKLIDTLTGHEGPV---WRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVN 105 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCE---EEEEECCGGGCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCCcEEEEecCCCcceeeeEecCCCCcE---EEEEeCCCCCCCEEEEecc--CCEEEEEEcCCCceeEeeeecCCCcceE
Confidence 3456777777655554443333221111 112221 2 455555553 3468899999998776654443322233
Q ss_pred EEEe--C--CEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcc-eeEEEE--------------CCEEEEEe
Q 013797 227 SATC--G--TFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKL-CSGCYM--------------DNKFYVIG 287 (436)
Q Consensus 227 ~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~--------------~g~iyv~g 287 (436)
++.+ + +.+++.|+.+ ..+.+||..+..-...-.+...... .+.+.. ++.+++.|
T Consensus 106 ~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 106 SVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp EEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred EEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 3333 2 5566666543 2578888877632111000001111 111222 46777777
Q ss_pred ccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEE-C---CEEEEEecCCCeEEEEECCCCc--EEE
Q 013797 288 GRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVV-N---NELYSLETSSNELRVYLKDSNS--WKN 359 (436)
Q Consensus 288 G~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~-~---g~lyv~gg~~~~i~~yd~~~~~--W~~ 359 (436)
+.+ ..+..||+.++ .+..+..+.. .......++.. + +.+++.++..+.|.+||..+.. +..
T Consensus 179 ~~d------g~i~i~d~~~~~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 247 (379)
T 3jrp_A 179 GAD------NLVKIWKYNSDAQTYVLESTLEG-----HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKK 247 (379)
T ss_dssp ETT------SCEEEEEEETTTTEEEEEEEECC-----CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE
T ss_pred eCC------CeEEEEEecCCCcceeeEEEEec-----ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcccee
Confidence 644 34778887654 3544433321 00011122222 3 6788888888899999988753 111
Q ss_pred cccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEee
Q 013797 360 LGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 360 v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
. .............+++ ..+++++++|+.+ ..+.+|.+.. ...|..+.
T Consensus 248 ~-~~~~~~~~~~v~~~~~-s~~g~~l~~~~~d----g~i~iw~~~~-----~~~~~~~~ 295 (379)
T 3jrp_A 248 T-LLKEEKFPDVLWRASW-SLSGNVLALSGGD----NKVTLWKENL-----EGKWEPAG 295 (379)
T ss_dssp E-ESSSSCCSSCEEEEEE-CSSSCCEEEEESS----SSEEEEEEEE-----TTEEEEEE
T ss_pred e-eeccccCCCcEEEEEE-cCCCCEEEEecCC----CcEEEEeCCC-----CCcccccc
Confidence 1 0111001111112222 3456666677665 4677775442 23676665
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.25 E-value=0.0031 Score=60.24 Aligned_cols=183 Identities=14% Similarity=0.107 Sum_probs=99.8
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-Ee-CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CA-GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP 221 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~-~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~ 221 (436)
+++.......+..||..+++.......... . .+++ .. +..||+.++. ...+.+||+.+++....-....
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~--~----~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSN--P----MGAVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSS--E----EEEEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEECSS-
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCC--c----ceEEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEECCC-
Confidence 444444567888999988765432221111 1 1122 22 4467776643 3579999999887544322222
Q ss_pred CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCCCcCC
Q 013797 222 RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKDKPLT 297 (436)
Q Consensus 222 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~~~~~ 297 (436)
.-..++.. +..||+.+..+ ..+.+||+.+++-...- .........+.. ++ .+|+.++. ..
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~------~~ 138 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTV--KTGKSPLGLALSPDGKKLYVTNNG------DK 138 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEETT------TT
T ss_pred -CccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEE--eCCCCcceEEECCCCCEEEEEeCC------CC
Confidence 22223332 34566665432 35899999987653321 111111222332 34 57677652 35
Q ss_pred EEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCcEEE
Q 013797 298 CGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 298 ~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
.+.+||+.+++....-.... . ...++.. ++ .||+.+...+.|.+||+.+++-..
T Consensus 139 ~v~~~d~~~~~~~~~~~~~~-----~---~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSVGR-----S---PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEEEETTTTEEEEEEECCS-----S---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEECCCCcEEEEEecCC-----C---cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 78999998886544322210 1 1122222 33 677777777899999998875443
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.18 E-value=0.0056 Score=58.47 Aligned_cols=219 Identities=15% Similarity=0.097 Sum_probs=111.1
Q ss_pred CCeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-e-CCEEEEEceecCCCeEEEEECCCCCEEeCCCC
Q 013797 141 EPSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-A-GTHLIVSGNEIEGGVIWRYELETNNWFKGPSM 218 (436)
Q Consensus 141 ~~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~-~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~ 218 (436)
...+++.......+..||..+++......... .. ..++. . +..||+.+. ....+.+||+.+++-...-..
T Consensus 43 g~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v----~~~~~spdg~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 43 GTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SP----QGVAVSPDGKQVYVTNM--ASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp SSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SE----EEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEECCCCCeEEEEECCCCeEEEEEECCC--Cc----cceEECCCCCEEEEEEC--CCCEEEEEECCCCeEEEEEeC
Confidence 33444444345678899998876544322222 11 11222 2 455666543 335799999999875443221
Q ss_pred CCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCCC
Q 013797 219 RRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKDK 294 (436)
Q Consensus 219 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~~ 294 (436)
......++.. +..+|+.++.+ ..+.+||..+++....-. ........+.. ++ .+|+.++.
T Consensus 115 --~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~----- 178 (391)
T 1l0q_A 115 --GKSPLGLALSPDGKKLYVTNNGD-------KTVSVINTVTKAVINTVS--VGRSPKGIAVTPDGTKVYVANFD----- 178 (391)
T ss_dssp --SSSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEE--CCSSEEEEEECTTSSEEEEEETT-----
T ss_pred --CCCcceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEEEEe--cCCCcceEEECCCCCEEEEEeCC-----
Confidence 1122233332 34577776532 368999998876543211 11111222222 34 56676652
Q ss_pred cCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEec--CCCeEEEEECCCCcEEEcccCCCccCCC
Q 013797 295 PLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSLET--SSNELRVYLKDSNSWKNLGLVPVRADFN 370 (436)
Q Consensus 295 ~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg--~~~~i~~yd~~~~~W~~v~~~p~~~~~~ 370 (436)
...+.+||+.+++-....... . ....++.. ++ .||+.+. ..+.|.+||+.+.+-.. .++.. .
T Consensus 179 -~~~v~~~d~~~~~~~~~~~~~------~--~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~---~ 244 (391)
T 1l0q_A 179 -SMSISVIDTVTNSVIDTVKVE------A--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA--RIPVG---P 244 (391)
T ss_dssp -TTEEEEEETTTTEEEEEEECS------S--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEE--EEECC---S
T ss_pred -CCEEEEEECCCCeEEEEEecC------C--CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEE--EEecC---C
Confidence 346899999887654332221 0 11112222 34 4555543 56899999998764332 22221 1
Q ss_pred CCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 371 RGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 371 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
...++++...+..||+.++.+ ..+.+|
T Consensus 245 ~~~~~~~s~dg~~l~~s~~~d----~~v~v~ 271 (391)
T 1l0q_A 245 DPAGIAVTPDGKKVYVALSFX----NTVSVI 271 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTT----TEEEEE
T ss_pred CccEEEEccCCCEEEEEcCCC----CEEEEE
Confidence 112233222244677776555 345555
No 44
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.15 E-value=0.12 Score=46.64 Aligned_cols=211 Identities=11% Similarity=0.027 Sum_probs=110.2
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCC-C
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR-R 220 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p-~ 220 (436)
.+++.......+..||+. +....... +...... ..++. .++.+|+... ....+++||+. ++.+... ++ .
T Consensus 27 ~l~v~~~~~~~v~~~d~~-~~~~~~~~-~~~~~~~---~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~-~~~~ 97 (299)
T 2z2n_A 27 KVWITQHKANMISCINLD-GKITEYPL-PTPDAKV---MCLTISSDGEVWFTEN--AANKIGRITKK-GIIKEYT-LPNP 97 (299)
T ss_dssp CEEEEETTTTEEEEECTT-CCEEEEEC-SSTTCCE---EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEE-CSST
T ss_pred CEEEEecCCCcEEEEcCC-CCeEEecC-CcccCce---eeEEECCCCCEEEeCC--CCCeEEEECCC-CcEEEEe-CCCc
Confidence 344443345678899988 76665432 1111111 11222 4677887642 23568999986 5554433 12 1
Q ss_pred CCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCE
Q 013797 221 PRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTC 298 (436)
Q Consensus 221 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~ 298 (436)
....+.++.. ++.+|+.... ...+.+||+ +++................+.. +|++|+... ....
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~ 163 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMN-------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN------QNNA 163 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET------TTTE
T ss_pred CCCceeeEECCCCCEEEEecC-------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC------CCCE
Confidence 1122233333 5788887532 135888998 6665543211111111222222 578888653 2356
Q ss_pred EEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEE
Q 013797 299 GEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAF 377 (436)
Q Consensus 299 v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~ 377 (436)
+.+||+ +++...+.. +. ......+++.. +|.||+.....+.|.+||+ +++...+. ++.. ...-.++++
T Consensus 164 i~~~~~-~g~~~~~~~-~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~--~~~~~~i~~ 232 (299)
T 2z2n_A 164 IGRITE-SGDITEFKI-PT-----PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK-IPTP--NARPHAITA 232 (299)
T ss_dssp EEEECT-TCCEEEEEC-SS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSST--TCCEEEEEE
T ss_pred EEEEcC-CCcEEEeeC-CC-----CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-CCCC--CCCceeEEE
Confidence 899999 777765421 10 01111233333 5789998766788999999 77776642 2211 111122221
Q ss_pred EEeCCEEEEEc
Q 013797 378 KSLGNELLVIG 388 (436)
Q Consensus 378 ~~~~~~l~v~G 388 (436)
..+|+||+..
T Consensus 233 -~~~g~l~v~~ 242 (299)
T 2z2n_A 233 -GAGIDLWFTE 242 (299)
T ss_dssp -CSTTCEEEEE
T ss_pred -CCCCCEEEec
Confidence 2356788875
No 45
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.12 E-value=0.0032 Score=57.01 Aligned_cols=121 Identities=10% Similarity=-0.095 Sum_probs=80.4
Q ss_pred CCCCCCCccc--EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCC
Q 013797 216 PSMRRPRCLF--ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKD 293 (436)
Q Consensus 216 ~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~ 293 (436)
...|.....+ .....++.+|+..|..+ .+.+.++|+++++=..--+++..-.+.+.+..+++||+...
T Consensus 35 ~~~phd~~~ftqGL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw----- 104 (262)
T 3nol_A 35 HSYPHDTKAFTEGFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW----- 104 (262)
T ss_dssp EEEECCTTCEEEEEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-----
T ss_pred EEecCCCCcccceEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe-----
Confidence 3344444443 33445889999988653 34689999999875433234433334556778999999975
Q ss_pred CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 294 KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
..+.+.+||+++.+-.. .++. +-.+.+++..+++||+..| .+.|+.+|+++.+
T Consensus 105 -~~~~v~v~D~~t~~~~~--ti~~------~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~ 157 (262)
T 3nol_A 105 -KNGLGFVWNIRNLRQVR--SFNY------DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLT 157 (262)
T ss_dssp -SSSEEEEEETTTCCEEE--EEEC------SSCCCCEEECSSCEEECCS-SSEEEEECTTTCS
T ss_pred -eCCEEEEEECccCcEEE--EEEC------CCCceEEecCCCEEEEECC-CCeEEEEcCCCCe
Confidence 34678999998876432 2221 1144556666678888877 6889999999854
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.06 E-value=0.13 Score=46.39 Aligned_cols=213 Identities=9% Similarity=0.078 Sum_probs=111.8
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR 220 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~ 220 (436)
..+++.......+..||+. ++...+. ++....... .++ ..++.+|+... ....+.+||+. ++.........
T Consensus 31 g~l~v~~~~~~~v~~~~~~-~~~~~~~-~~~~~~~~~---~i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQS-GRIKEFE-VPTPDAKVM---CLIVSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCEE---EEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSST
T ss_pred CCEEEEcCCCCeEEEECCC-CceEEEE-CCCCCCcce---eEEECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCCC
Confidence 3455544445678899988 6665432 121111111 122 23577888642 23579999998 77664422111
Q ss_pred CCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCC
Q 013797 221 PRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLT 297 (436)
Q Consensus 221 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~ 297 (436)
....+.++.- ++.+|+.... ...+.+||+. ++..... ++........... +|++|+... ...
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~------~~~ 167 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTEN------QNN 167 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TTT
T ss_pred CCCCccceECCCCCEEEEccC-------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEec------CCC
Confidence 1222333332 6788887532 2358889987 6655432 1211112222333 577888653 234
Q ss_pred EEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEE
Q 013797 298 CGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIA 376 (436)
Q Consensus 298 ~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~ 376 (436)
.+.+||+ +++...+.. +. ......+++.. +|.||+.....+.|.+||+ +++...+. ++.. ...-.+++
T Consensus 168 ~i~~~~~-~g~~~~~~~-~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~--~~~~~~i~ 236 (300)
T 2qc5_A 168 SIGRITN-TGKLEEYPL-PT-----NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD-IPTP--NARPHAIT 236 (300)
T ss_dssp EEEEECT-TCCEEEEEC-SS-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSST--TCCEEEEE
T ss_pred eEEEECC-CCcEEEeeC-CC-----CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE-CCCC--CCCceEEE
Confidence 6899998 666665431 11 11111233333 5789998765678999999 56666542 2211 11112222
Q ss_pred EEEeCCEEEEEcC
Q 013797 377 FKSLGNELLVIGA 389 (436)
Q Consensus 377 ~~~~~~~l~v~GG 389 (436)
+ ..+++||+...
T Consensus 237 ~-d~~g~l~v~~~ 248 (300)
T 2qc5_A 237 A-GKNSEIWFTEW 248 (300)
T ss_dssp E-CSTTCEEEEET
T ss_pred E-CCCCCEEEecc
Confidence 1 23567888763
No 47
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.01 E-value=0.095 Score=48.07 Aligned_cols=215 Identities=13% Similarity=0.111 Sum_probs=105.4
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+.+...... ... .....+. ..++.+++.|+. ...+.+||..+++-... +........++
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~--~h~---~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~--~~~~~~~v~~~ 113 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTIS--GHK---LGISDVAWSSDSNLLVSASD--DKTLKIWDVSSGKCLKT--LKGHSNYVFCC 113 (312)
T ss_dssp TTSCEEEEETTTCCEEEEEC--CCS---SCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEE--EECCSSCEEEE
T ss_pred CCCeEEEEeCCCcccchhhc--cCC---CceEEEEEcCCCCEEEEECC--CCEEEEEECCCCcEEEE--EcCCCCCEEEE
Confidence 34567788887766544211 110 0001112 225555566553 35789999988763221 11111111222
Q ss_pred Ee--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 229 TC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 229 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
.+ ++..++.|+.++ .+.+||..+++-... ++........+.+ ++++++.|+.+ ..+..||+
T Consensus 114 ~~~~~~~~l~s~~~d~-------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~wd~ 178 (312)
T 4ery_A 114 NFNPQSNLIVSGSFDE-------SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD------GLCRIWDT 178 (312)
T ss_dssp EECSSSSEEEEEETTS-------CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEET
T ss_pred EEcCCCCEEEEEeCCC-------cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEEC
Confidence 22 455666666442 488899987653221 1111111122222 56677777644 35789999
Q ss_pred CCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCC
Q 013797 305 YAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGN 382 (436)
Q Consensus 305 ~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 382 (436)
.+++-...-... .......+.+ +++.++.++..+.|.+||..+.+-... +.............+...++
T Consensus 179 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 179 ASGQCLKTLIDD-------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--YTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TTCCEEEEECCS-------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE--ECSSCCSSSCCCEEEECSSS
T ss_pred CCCceeeEEecc-------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE--EEecCCceEEEEEEEEeCCC
Confidence 877543211111 0011111222 567777777788999999987653322 11110111111122223567
Q ss_pred EEEEEcCCCCCCCCcEEEE
Q 013797 383 ELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 383 ~l~v~GG~~~~~~~~~~~y 401 (436)
.+++.|+.++ .+.+|
T Consensus 250 ~~l~sg~~dg----~i~vw 264 (312)
T 4ery_A 250 KWIVSGSEDN----LVYIW 264 (312)
T ss_dssp CEEEECCTTS----CEEEE
T ss_pred cEEEEECCCC----EEEEE
Confidence 7777887763 45555
No 48
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.99 E-value=0.15 Score=45.99 Aligned_cols=209 Identities=11% Similarity=0.094 Sum_probs=108.6
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC-
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP- 221 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~- 221 (436)
+++.......+..||+. ++...+. ++...... ..++. .++.+|+... ....+++||+. ++..... ++..
T Consensus 75 l~v~~~~~~~v~~~d~~-g~~~~~~-~~~~~~~~---~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~-~~~~~ 145 (300)
T 2qc5_A 75 IWFTENGANKIGKLSKK-GGFTEYP-LPQPDSGP---YGITEGLNGDIWFTQL--NGDRIGKLTAD-GTIYEYD-LPNKG 145 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCE---EEEEECSTTCEEEEET--TTTEEEEECTT-SCEEEEE-CSSTT
T ss_pred EEEEecCCCeEEEECCC-CCeEEec-CCCCCCCC---ccceECCCCCEEEEcc--CCCeEEEECCC-CCEEEcc-CCCCC
Confidence 44444345678889988 6665432 11111111 11222 3678887642 23579999998 6655432 1111
Q ss_pred CcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCE
Q 013797 222 RCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTC 298 (436)
Q Consensus 222 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~ 298 (436)
.....++. -++++|+.... ...+.+||+ +++..... ++..........+ +|.||+... ....
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~------~~~~ 210 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQ-------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEI------MGNK 210 (300)
T ss_dssp CCEEEEEECTTSSEEEEETT-------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TTTE
T ss_pred CCceeEEECCCCCEEEEecC-------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEcc------CCCE
Confidence 11222333 25678887532 235889998 66766542 1222122233333 578888753 2346
Q ss_pred EEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEE
Q 013797 299 GEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAF 377 (436)
Q Consensus 299 v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~ 377 (436)
+.+||+ +++...... +. ......+++.. +|+||+.....+.|.+||+ +.+..... ++.. ...-.++++
T Consensus 211 i~~~~~-~g~~~~~~~-~~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~--~~~~~~i~~ 279 (300)
T 2qc5_A 211 IGRITT-TGEISEYDI-PT-----PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQ-LQTE--NAEPHGITF 279 (300)
T ss_dssp EEEECT-TCCEEEEEC-SS-----TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEE-CCST--TCCCCCEEE
T ss_pred EEEEcC-CCcEEEEEC-CC-----CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEE-CCcc--CCccceeEe
Confidence 899998 566655421 11 01111223332 5789998765689999999 45665542 2211 111222331
Q ss_pred EEeCCEEEEEc
Q 013797 378 KSLGNELLVIG 388 (436)
Q Consensus 378 ~~~~~~l~v~G 388 (436)
.-+|+||+.+
T Consensus 280 -~~~g~l~v~~ 289 (300)
T 2qc5_A 280 -GKDGSVWFAL 289 (300)
T ss_dssp -CTTSCEEEEC
T ss_pred -CCCCCEEEEc
Confidence 3357788764
No 49
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.95 E-value=0.018 Score=52.50 Aligned_cols=113 Identities=14% Similarity=0.030 Sum_probs=73.0
Q ss_pred cEEEEeC-CEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEE
Q 013797 225 FASATCG-TFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 225 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
+.++..+ +.+|+..|..+ .+.+.++|+.+++=...-+++......+.+..++++|+..- ..+.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~-----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG-----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------LKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTT-----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------TCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC-----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------cCCEEEEEE
Confidence 4555544 89999877432 34699999999875432222322233456677889999975 346789999
Q ss_pred CCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 304 EYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
+.+.+ .+..++.+ . -.+.+++..++++|+..+ .+.+.++|+++.+
T Consensus 93 ~~t~~--v~~~i~~g----~-~~g~glt~Dg~~l~vs~g-s~~l~viD~~t~~ 137 (266)
T 2iwa_A 93 RRTLS--NIKNFTHQ----M-KDGWGLATDGKILYGSDG-TSILYEIDPHTFK 137 (266)
T ss_dssp TTTTE--EEEEEECC----S-SSCCEEEECSSSEEEECS-SSEEEEECTTTCC
T ss_pred CCCCc--EEEEEECC----C-CCeEEEEECCCEEEEECC-CCeEEEEECCCCc
Confidence 98764 23333211 0 123445555678998875 7899999998854
No 50
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.95 E-value=0.053 Score=51.04 Aligned_cols=226 Identities=10% Similarity=0.012 Sum_probs=105.8
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceec-CCCe--EEEEECCCCCEEeCCCCCCCC-cccEE
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEI-EGGV--IWRYELETNNWFKGPSMRRPR-CLFAS 227 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~-~~~~--v~~ydp~t~~W~~l~~~p~~r-~~~~~ 227 (436)
.++.+|+.+++...+... ....... .+..- +..||+.+... .... +|.+++.+++.+.+...+... .....
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~~---l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPSY---LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCCS---EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCce---EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE
Confidence 456678888887765543 1111111 12223 44577765431 1234 466677777777665443222 12222
Q ss_pred EEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeC-------CCCccC-C---cc-eeEEEE-CCE-EEEEeccCCC
Q 013797 228 ATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSL-------PGMRQR-R---KL-CSGCYM-DNK-FYVIGGRNEK 292 (436)
Q Consensus 228 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~-------~~~p~~-r---~~-~~~~~~-~g~-iyv~gG~~~~ 292 (436)
+.-+..+|+.+.. ...+.+|+..++. ...+ +.-+.+ | .. +.+++. +|+ +|+.+.
T Consensus 106 ~~dg~~l~~~~~~-------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---- 174 (361)
T 3scy_A 106 TTNGKNIVTANYS-------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL---- 174 (361)
T ss_dssp EECSSEEEEEETT-------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET----
T ss_pred EECCCEEEEEECC-------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC----
Confidence 3323446665432 2357788876432 1111 101110 1 11 222322 554 776653
Q ss_pred CCcCCEEEEEECCCCc-------EEEc-----CCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCCCcE
Q 013797 293 DKPLTCGEAYDEYAGT-------WYHI-----PDILKDFPAETGKSPPLIAVV--NN-ELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~~-------W~~v-----~~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg~~~~i~~yd~~~~~W 357 (436)
..+.+.+|+..... .... ...+ .. .++..+.+ +| .||+.+...+.|.+||..+++.
T Consensus 175 --~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~-~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 175 --GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA------PG-SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp --TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC------TT-CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred --CCCEEEEEEEcCCCCcccccceeecccccceecC------CC-CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 23457777665433 2111 1111 01 11112232 45 5777775678899999988877
Q ss_pred EEcccCCCccCC-CCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 358 KNLGLVPVRADF-NRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 358 ~~v~~~p~~~~~-~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
+.+..++..... ....++++..-|..||+.+... ...+.+|.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~---~~~i~v~~~~~ 291 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK---ADGVAIFKVDE 291 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS---SCEEEEEEECT
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC---CCEEEEEEEcC
Confidence 666544322111 1112233222334566654330 14677886554
No 51
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.89 E-value=0.00025 Score=64.83 Aligned_cols=46 Identities=9% Similarity=0.122 Sum_probs=42.3
Q ss_pred CCCChHHHHHHhhccCCcccccccccccHhhhhhhccchhHHHHhh
Q 013797 91 VPSLSDELEVLIVARVPRAEYWKFYLLNKRFLSLLKSGELFKIRRE 136 (436)
Q Consensus 91 ~~~LPddl~~~ILarLP~~~l~~~~~Vck~w~~li~s~~f~~~~~~ 136 (436)
+..||+|++..||+.|+.+++.++.+|||+|+.+..++.+++....
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~ 50 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 50 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHh
Confidence 4579999999999999999999999999999999999999877644
No 52
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.89 E-value=0.15 Score=53.77 Aligned_cols=208 Identities=7% Similarity=-0.103 Sum_probs=109.0
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC-CcccEEEE
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP-RCLFASAT 229 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~-r~~~~~~~ 229 (436)
..++.||+.++++..... +....... ..++.. .++.|++.. ...-+++||+.+++++.......+ ..-.++..
T Consensus 383 ~Gl~~~~~~~~~~~~~~~-~~~~~~~~-v~~i~~d~~g~lWigt---~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 457 (781)
T 3v9f_A 383 GGINVFENGKRVAIYNKE-NRELLSNS-VLCSLKDSEGNLWFGT---YLGNISYYNTRLKKFQIIELEKNELLDVRVFYE 457 (781)
T ss_dssp SCEEEEETTEEEEECC------CCCSB-EEEEEECTTSCEEEEE---TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEE
T ss_pred CcEEEEECCCCeEEEccC-CCCCCCcc-eEEEEECCCCCEEEEe---ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEE
Confidence 457788888776665421 11111010 011222 267787731 223589999999999887642111 11122222
Q ss_pred e-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCc---cCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEE
Q 013797 230 C-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMR---QRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 230 ~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
- ++.|++... .-+.+||+.+++|+.....+ ........... +|.|++-.. ...+.+||
T Consensus 458 d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~~Gl~~~~ 521 (781)
T 3v9f_A 458 DKNKKIWIGTH---------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-------GGGVGIYT 521 (781)
T ss_dssp CTTSEEEEEET---------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-------SSCEEEEC
T ss_pred CCCCCEEEEEC---------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-------CCCEEEEe
Confidence 2 567777532 23889999999887653222 11111112222 567776431 13478999
Q ss_pred CCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeE-EEEECCCCcEEEcccCCCccCCCCCceEEEEEeC
Q 013797 304 EYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNEL-RVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLG 381 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i-~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 381 (436)
+.++++..+.... . .+.. ...+++. .+|.|++... +.+ .+||+++++++........+. ....+++ ...+
T Consensus 522 ~~~~~~~~~~~~~-~--l~~~-~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~~~~~~~~~~gl~~-~~i~~i~-~d~~ 593 (781)
T 3v9f_A 522 PDMQLVRKFNQYE-G--FCSN-TINQIYRSSKGQMWLATG--EGLVCFPSARNFDYQVFQRKEGLPN-THIRAIS-EDKN 593 (781)
T ss_dssp TTCCEEEEECTTT-T--CSCS-CEEEEEECTTSCEEEEET--TEEEEESCTTTCCCEEECGGGTCSC-CCCCEEE-ECSS
T ss_pred CCCCeEEEccCCC-C--CCCC-eeEEEEECCCCCEEEEEC--CCceEEECCCCCcEEEccccCCCCC-ceEEEEE-ECCC
Confidence 9999988875421 0 0111 1112222 2577877643 567 999999998887753221111 1112222 2346
Q ss_pred CEEEEEc
Q 013797 382 NELLVIG 388 (436)
Q Consensus 382 ~~l~v~G 388 (436)
|.|++.+
T Consensus 594 g~lW~~t 600 (781)
T 3v9f_A 594 GNIWAST 600 (781)
T ss_dssp SCEEEEC
T ss_pred CCEEEEc
Confidence 7787765
No 53
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.88 E-value=0.1 Score=48.23 Aligned_cols=215 Identities=10% Similarity=-0.053 Sum_probs=110.5
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPR 222 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r 222 (436)
+|+.-.....++.||+.... ......+. ... .++ ..++.+|+.........++++|+.+++.+.+...+..+
T Consensus 45 lyv~d~~~~~I~~~d~~g~~-~~~~~~~~---~p~---gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 45 IFVTNHEVGEIVSITPDGNQ-QIHATVEG---KVS---GLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp EEEEETTTTEEEEECTTCCE-EEEEECSS---EEE---EEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred EEEEeCCCCeEEEECCCCce-EEEEeCCC---Cce---eEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence 55544345678888887642 22211211 111 122 33677888754322346899999999887665544434
Q ss_pred cccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCC---eEeCCC----Cc-cCCccee-EEEECCEEEEEeccCCC
Q 013797 223 CLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKS---WDSLPG----MR-QRRKLCS-GCYMDNKFYVIGGRNEK 292 (436)
Q Consensus 223 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~----~p-~~r~~~~-~~~~~g~iyv~gG~~~~ 292 (436)
.....+. .++.+|+.... ...++++|+.+.. |..-+. .+ ....... ...-++.||+..-
T Consensus 118 ~~~g~~~~~~~~~~v~d~~-------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~---- 186 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTADSY-------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT---- 186 (306)
T ss_dssp CEEEEEESSSSEEEEEETT-------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET----
T ss_pred ccCcccccCCCcEEEEECC-------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC----
Confidence 3333333 35567776321 2368999987642 211110 11 1111122 2233567998764
Q ss_pred CCcCCEEEEEECCC-CcE---EEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCcc
Q 013797 293 DKPLTCGEAYDEYA-GTW---YHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRA 367 (436)
Q Consensus 293 ~~~~~~v~~yD~~~-~~W---~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~ 367 (436)
..+.+.+||+.. ++. ..+.... ....+++. +|.||+.....+.|.+||++ .+-..+...+..
T Consensus 187 --~~~~I~~~~~~~~g~~~~~~~~~~~~---------~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~- 253 (306)
T 2p4o_A 187 --EKMLLLRIPVDSTDKPGEPEIFVEQT---------NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG- 253 (306)
T ss_dssp --TTTEEEEEEBCTTSCBCCCEEEEESC---------CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT-
T ss_pred --CCCEEEEEEeCCCCCCCccEEEeccC---------CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc-
Confidence 346789999875 221 1111110 11224443 67899987667889999987 444443222211
Q ss_pred CCCCCceEEEE---EeCCEEEEEcCC
Q 013797 368 DFNRGWGIAFK---SLGNELLVIGAS 390 (436)
Q Consensus 368 ~~~~~~~~~~~---~~~~~l~v~GG~ 390 (436)
...-.++++. .-++.|||....
T Consensus 254 -~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 254 -VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -cCCceEEEEecccCCCCEEEEECCC
Confidence 0111223321 123689997653
No 54
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.86 E-value=0.1 Score=55.29 Aligned_cols=210 Identities=7% Similarity=-0.022 Sum_probs=111.8
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCC----CCCCcc-c
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSM----RRPRCL-F 225 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~----p~~r~~-~ 225 (436)
..++.||+.++++..+........... ..++.. .++.|++... .-+++||+.+++|+..... ..+... .
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~-v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 501 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNEN-VYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVSKQIT 501 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSC-EEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCCCCEE
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCe-eEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCCceEE
Confidence 467889999888877653211111111 011222 2567777532 3589999999999887533 111111 1
Q ss_pred EEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC---c-cCCcceeEEEE--CCEEEEEeccCCCCCcCCE
Q 013797 226 ASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM---R-QRRKLCSGCYM--DNKFYVIGGRNEKDKPLTC 298 (436)
Q Consensus 226 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---p-~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~ 298 (436)
++.. -++.|++... . -+.+||+.++++ ..... . .+-....+... +|.|++... ..
T Consensus 502 ~i~~d~~g~lWigt~-~--------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--------~G 563 (795)
T 4a2l_A 502 TLFRDSHKRLWIGGE-E--------GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--------EG 563 (795)
T ss_dssp EEEECTTCCEEEEES-S--------CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES--------SC
T ss_pred EEEECCCCCEEEEeC-C--------ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC--------CC
Confidence 2222 2567777643 2 278899988887 43211 1 11111122222 577777432 24
Q ss_pred EEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEE
Q 013797 299 GEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAF 377 (436)
Q Consensus 299 v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~ 377 (436)
+..||+.++++....... . .+.. ...+++.. +|.|++.+ .+.+.+||+++++++........+.........+
T Consensus 564 l~~~d~~~~~~~~~~~~~-g--l~~~-~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~ 637 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTN-G--LPNN-VVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFTESDGLQSNQFNTASYC 637 (795)
T ss_dssp EEEEETTTTEEEEECGGG-T--CSCS-CEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEE
T ss_pred ceeECCCCCcEEEeCCCC-C--Cchh-heEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCCCccccCccCcee
Confidence 799999999988765321 0 0111 11223332 57888875 4789999999999887753222211111112333
Q ss_pred EEeCCEEEEEcCCC
Q 013797 378 KSLGNELLVIGASS 391 (436)
Q Consensus 378 ~~~~~~l~v~GG~~ 391 (436)
...+|.||+ |+..
T Consensus 638 ~~~~G~l~~-g~~~ 650 (795)
T 4a2l_A 638 RTSVGQMYF-GGIN 650 (795)
T ss_dssp ECTTSCEEE-EETT
T ss_pred ECCCCeEEE-ecCC
Confidence 234566655 5443
No 55
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.83 E-value=0.026 Score=52.25 Aligned_cols=233 Identities=9% Similarity=0.021 Sum_probs=110.4
Q ss_pred CCeEEEeccCCCeEEEEecCCCCe-EeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECCCCCEEeCCCC
Q 013797 141 EPSVFMLASGDSSWWAFDRHFQTR-RKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELETNNWFKGPSM 218 (436)
Q Consensus 141 ~~~l~~~~~~~~~~~~~dp~~~~W-~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~ 218 (436)
...+++.......++.+|+.+.+. ............. ....- +..+|+..+......+.+||+.+++-...-+
T Consensus 51 g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~----~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~- 125 (331)
T 3u4y_A 51 CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD----VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP- 125 (331)
T ss_dssp SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC----EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-
T ss_pred CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc----eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-
Confidence 344555555566889999988764 2211111111110 12222 4556632221122389999999887644322
Q ss_pred CCCCcccEEEEe-CC-EEEEEcCcCCCCCCccceEEEEeCCCCC-eEeC--CCCccCCcceeEEEE-CCE-EEEEeccCC
Q 013797 219 RRPRCLFASATC-GT-FAFVAGGHGMDGSGVLNSAERYNPETKS-WDSL--PGMRQRRKLCSGCYM-DNK-FYVIGGRNE 291 (436)
Q Consensus 219 p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~--~~~p~~r~~~~~~~~-~g~-iyv~gG~~~ 291 (436)
.....+.++.. ++ .+|+.+.... ..+.+|+...+. -... ..++........++. +|+ +|+.+.
T Consensus 126 -~~~~~~~~~~spdg~~l~~~~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--- 195 (331)
T 3u4y_A 126 -IPYDAVGIAISPNGNGLILIDRSSA------NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL--- 195 (331)
T ss_dssp -CCTTEEEEEECTTSSCEEEEEETTT------TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET---
T ss_pred -CCCCccceEECCCCCEEEEEecCCC------ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC---
Confidence 12222333333 34 5777754321 125666654322 1111 000111111222222 454 777664
Q ss_pred CCCcCCEEEEEECCCCcE-EEcCCCCCCCCCCCCCCCCEEEEE-CCE-EEEEecCCCeEEEEECCCCcEEEcccCCCc--
Q 013797 292 KDKPLTCGEAYDEYAGTW-YHIPDILKDFPAETGKSPPLIAVV-NNE-LYSLETSSNELRVYLKDSNSWKNLGLVPVR-- 366 (436)
Q Consensus 292 ~~~~~~~v~~yD~~~~~W-~~v~~~~~~~~~~~~r~~~~~~~~-~g~-lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~-- 366 (436)
..+.+.+||+.+++. ..+..++. ......++.. +|+ ||+.....+.|.+||+++.+.+.+..++..
T Consensus 196 ---~~~~v~v~d~~~~~~~~~~~~~~~------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 266 (331)
T 3u4y_A 196 ---IGNSIGILETQNPENITLLNAVGT------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLL 266 (331)
T ss_dssp ---TTTEEEEEECSSTTSCEEEEEEEC------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCC
T ss_pred ---CCCeEEEEECCCCcccceeeeccC------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccc
Confidence 235689999987764 11222211 1111123332 455 777765566799999999887665433321
Q ss_pred cCCCCC---ceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 367 ADFNRG---WGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 367 ~~~~~~---~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
...... .++++..-+..||+.+... ..+.+|
T Consensus 267 ~~~~~~~~~~~~~~spdg~~l~v~~~~~----~~v~v~ 300 (331)
T 3u4y_A 267 IDPRPLFGANQMALNKTETKLFISANIS----RELKVF 300 (331)
T ss_dssp CCCGGGTTCCCEEECTTSSEEEEEETTT----TEEEEE
T ss_pred cCCCCcccccceEECCCCCEEEEecCCC----CcEEEE
Confidence 111111 1234433445677765543 356666
No 56
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.83 E-value=0.02 Score=51.84 Aligned_cols=115 Identities=9% Similarity=-0.091 Sum_probs=77.4
Q ss_pred CCCCccc--EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcC
Q 013797 219 RRPRCLF--ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 219 p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~ 296 (436)
|.....| .....++.+|+..|..+ .+.++|+++++=..-- ++..-.+.+.+..+++||+... ..
T Consensus 50 phd~~~ftqGL~~~~~~Ly~stG~~g-------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw------~~ 115 (268)
T 3nok_A 50 PHATNAFTQGLVFHQGHFFESTGHQG-------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW------TE 115 (268)
T ss_dssp ECCTTCCEEEEEEETTEEEEEETTTT-------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES------SS
T ss_pred cCCCccccceEEEECCEEEEEcCCCC-------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc------cC
Confidence 4444343 44455899999988653 2889999998743221 3433334456777899999865 34
Q ss_pred CEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 297 TCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 297 ~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
+.+++||+++.+-.. .++. +-.+.+++..+++||+..| .+.|+.+|+++.+
T Consensus 116 ~~v~V~D~~Tl~~~~--ti~~------~~eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~ 166 (268)
T 3nok_A 116 GLLFTWSGMPPQRER--TTRY------SGEGWGLCYWNGKLVRSDG-GTMLTFHEPDGFA 166 (268)
T ss_dssp CEEEEEETTTTEEEE--EEEC------SSCCCCEEEETTEEEEECS-SSEEEEECTTTCC
T ss_pred CEEEEEECCcCcEEE--EEeC------CCceeEEecCCCEEEEECC-CCEEEEEcCCCCe
Confidence 678999998775432 2221 1134567777889999986 7899999999864
No 57
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.047 Score=57.71 Aligned_cols=210 Identities=6% Similarity=0.010 Sum_probs=113.1
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCC---CCCcc-cE
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR---RPRCL-FA 226 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p---~~r~~-~~ 226 (436)
..++.||+.++++..+.....+.... .+++. .++.|++... .-+++||+.+++|....... ..... .+
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v---~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDV---RVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCE---EEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeE---EEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 46788999988888765321111100 11222 2677877532 46999999999887654322 11111 12
Q ss_pred EEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCc-cCCcceeEEEE--CCEEEEEeccCCCCCcCCEE-EE
Q 013797 227 SAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMR-QRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCG-EA 301 (436)
Q Consensus 227 ~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v-~~ 301 (436)
+.. -++.|++..... -+.+||+.+++++...... .+-....+... +|.|++... ..+ ..
T Consensus 500 i~~d~~g~lWigt~~~--------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--------~Glv~~ 563 (781)
T 3v9f_A 500 IAQDSEGRFWIGTFGG--------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--------EGLVCF 563 (781)
T ss_dssp EEECTTCCEEEEESSS--------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--------TEEEEE
T ss_pred EEEcCCCCEEEEEcCC--------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--------CCceEE
Confidence 222 256777653211 2788999998887764311 11111112222 567777531 346 88
Q ss_pred EECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEe
Q 013797 302 YDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSL 380 (436)
Q Consensus 302 yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~ 380 (436)
||+.++++....... .. +.. ...+++.. +|.|++.+ .+.+.+||+++++++........+......+..+...
T Consensus 564 ~d~~~~~~~~~~~~~-gl--~~~-~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~ 637 (781)
T 3v9f_A 564 PSARNFDYQVFQRKE-GL--PNT-HIRAISEDKNGNIWAST--NTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDH 637 (781)
T ss_dssp SCTTTCCCEEECGGG-TC--SCC-CCCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECT
T ss_pred ECCCCCcEEEccccC-CC--CCc-eEEEEEECCCCCEEEEc--CCceEEEECCCCceEEecccCCccccccccCceEECC
Confidence 999999887765311 00 111 12334443 57888874 4679999999999888753222211112222333234
Q ss_pred CCEEEEEcCCC
Q 013797 381 GNELLVIGASS 391 (436)
Q Consensus 381 ~~~l~v~GG~~ 391 (436)
+|+||+ |+..
T Consensus 638 ~G~l~~-g~~~ 647 (781)
T 3v9f_A 638 NGLIYF-GSIN 647 (781)
T ss_dssp TSCEEE-EETT
T ss_pred CCEEEE-ECCC
Confidence 566555 5544
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.77 E-value=0.024 Score=53.15 Aligned_cols=190 Identities=9% Similarity=-0.003 Sum_probs=94.2
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcc-eeEE
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKL-CSGC 277 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~ 277 (436)
-.+|.+|+.++++..+........-..++. -++++|+.+... ....+.+||..+++++.+......... ...+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 357888998888876432211111112222 267788775421 124688999988887766442221112 2223
Q ss_pred EE-CCE-EEEEeccCCCCCcCCEEEEEECC-CCcEEEcCCCCCCCCCCCCC---CCCEEEEE--CCEEEEEecCCCeEEE
Q 013797 278 YM-DNK-FYVIGGRNEKDKPLTCGEAYDEY-AGTWYHIPDILKDFPAETGK---SPPLIAVV--NNELYSLETSSNELRV 349 (436)
Q Consensus 278 ~~-~g~-iyv~gG~~~~~~~~~~v~~yD~~-~~~W~~v~~~~~~~~~~~~r---~~~~~~~~--~g~lyv~gg~~~~i~~ 349 (436)
+. +|+ ||+.+. ....+.+||+. +++...+.........+..| .....+.+ +|++|+.+...+.+.+
T Consensus 93 ~spdg~~l~~~~~------~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 93 VDEARQLVYSANY------HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV 166 (347)
T ss_dssp EETTTTEEEEEET------TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeC------CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE
Confidence 32 454 666553 12457788874 33444333221100000011 11112223 6678887766778999
Q ss_pred EECC-CCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 350 YLKD-SNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 350 yd~~-~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
||.. +++...+....... ...-.++++..-|..||+.+... ..+.+|.+++
T Consensus 167 ~~~~~~g~~~~~~~~~~~~-g~~p~~~~~spdg~~l~v~~~~~----~~v~v~~~~~ 218 (347)
T 3hfq_A 167 YNVSDAGQLSEQSVLTMEA-GFGPRHLVFSPDGQYAFLAGELS----SQIASLKYDT 218 (347)
T ss_dssp EEECTTSCEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTT----TEEEEEEEET
T ss_pred EEECCCCcEEEeeeEEcCC-CCCCceEEECCCCCEEEEEeCCC----CEEEEEEecC
Confidence 9988 56665543221110 01111233322234577766544 3566776554
No 59
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.74 E-value=0.064 Score=47.95 Aligned_cols=180 Identities=11% Similarity=-0.002 Sum_probs=96.2
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPR 222 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r 222 (436)
+++... ...++.||+.......+....... . ..++. .++.+|+.... ...+++++..+............
T Consensus 80 l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~--p---~~i~~~~~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~- 150 (270)
T 1rwi_B 80 VYVTDF-NNRVVTLAAGSNNQTVLPFDGLNY--P---EGLAVDTQGAVYVADRG--NNRVVKLAAGSKTQTVLPFTGLN- 150 (270)
T ss_dssp EEEEET-TTEEEEECTTCSCCEECCCCSCSS--E---EEEEECTTCCEEEEEGG--GTEEEEECTTCCSCEECCCCSCC-
T ss_pred EEEEcC-CCEEEEEeCCCceEeeeecCCcCC--C---cceEECCCCCEEEEECC--CCEEEEEECCCceeEeeccccCC-
Confidence 444433 456788888776544432211111 1 11222 36778887432 34688888777654433221111
Q ss_pred cccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEE
Q 013797 223 CLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 223 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v 299 (436)
....++.. ++++|+.... ...+.+||+.+..-........ .......+ +|.+|+... ..+.+
T Consensus 151 ~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~------~~~~v 215 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTD-------NNRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEH------NTNQV 215 (270)
T ss_dssp SCCCEEECTTCCEEEEEGG-------GTEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEEEET------TTSCE
T ss_pred CceeEEEeCCCCEEEEECC-------CCEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEEEEC------CCCcE
Confidence 11223333 5778887542 2358899988776443321111 22233333 468888764 23458
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCC
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~ 354 (436)
.+||+....-...... ......++++. +|+||+.....+.|.+|++..
T Consensus 216 ~~~~~~~~~~~~~~~~-------~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 216 VKLLAGSTTSTVLPFT-------GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEECTTCSCCEECCCC-------SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEEcCCCCcceeeccC-------CCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 8999876643332211 01111223332 578999987778999998764
No 60
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.71 E-value=0.2 Score=46.95 Aligned_cols=113 Identities=14% Similarity=0.144 Sum_probs=60.1
Q ss_pred CC-EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecC-CCeEEEEECC-
Q 013797 280 DN-KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NN-ELYSLETS-SNELRVYLKD- 353 (436)
Q Consensus 280 ~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg~-~~~i~~yd~~- 353 (436)
+| .+|+.+. ..+.+.+||+.+++...+..+... +.....+..+.+ +| .||+.... .+.+.+|+..
T Consensus 221 dg~~l~v~~~------~~~~v~v~~~~~g~~~~~~~~~~~---~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 221 DGKFAYLINE------IGGTVIAFRYADGMLDEIQTVAAD---TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp TSSEEEEEET------TTCEEEEEEEETTEEEEEEEEESC---SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred CCCEEEEEcC------CCCeEEEEEecCCceEEeEEEecC---CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcC
Confidence 45 4777653 235688899888877555432210 011112222333 45 46666554 5778888764
Q ss_pred -CCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCC
Q 013797 354 -SNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSD 408 (436)
Q Consensus 354 -~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d 408 (436)
+++++.+..++.. ..-.++++..-+..||+.+..+ ..+.+|.+++++.
T Consensus 292 ~~g~~~~~~~~~~g---~~~~~~~~spdg~~l~~~~~~~----~~v~v~~~d~~~g 340 (361)
T 3scy_A 292 TNGTLTKVGYQLTG---IHPRNFIITPNGKYLLVACRDT----NVIQIFERDQATG 340 (361)
T ss_dssp TTCCEEEEEEEECS---SCCCEEEECTTSCEEEEEETTT----TEEEEEEECTTTC
T ss_pred CCCcEEEeeEecCC---CCCceEEECCCCCEEEEEECCC----CCEEEEEEECCCC
Confidence 6777777655431 1112344322234466654333 4688887776543
No 61
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.71 E-value=0.2 Score=53.02 Aligned_cols=187 Identities=9% Similarity=0.038 Sum_probs=100.2
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCC--c-cCCCeeeEE-eCCE-EEEEceecCCCeEEEEECCCCCEEeCCCCCC--C-Cc
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPC--F-KLGDKESLC-AGTH-LIVSGNEIEGGVIWRYELETNNWFKGPSMRR--P-RC 223 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~--~-~~~~~~~~~-~~~~-iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~--~-r~ 223 (436)
..+..||+.++++......+.... . .....+++. .++. |++.. ...-+++||+.+++++....... + ..
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt---~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT---HAGGLSILHRNSGQVENFNQRNSQLVNEN 453 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE---TTTEEEEEETTTCCEEEECTTTSCCSCSC
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe---CcCceeEEeCCCCcEEEeecCCCCcCCCe
Confidence 367789999888877643221100 0 011112222 2566 77642 22358999999999877653211 1 11
Q ss_pred ccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC----ccCCcceeEEEE--CCEEEEEeccCCCCCcC
Q 013797 224 LFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM----RQRRKLCSGCYM--DNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 224 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~----p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~ 296 (436)
-.++..- ++.|++... . -+.+||+.+++|+..... ............ +|.|++...
T Consensus 454 v~~i~~d~~g~lwigt~-~--------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------- 516 (795)
T 4a2l_A 454 VYAILPDGEGNLWLGTL-S--------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------- 516 (795)
T ss_dssp EEEEEECSSSCEEEEES-S--------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--------
T ss_pred eEEEEECCCCCEEEEec-C--------ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--------
Confidence 1122222 567777543 2 278899999999877432 111111112222 567777542
Q ss_pred CEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEccc
Q 013797 297 TCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSNSWKNLGL 362 (436)
Q Consensus 297 ~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~ 362 (436)
..+..||+.++++ .+......... ......+++. .+|.|++... +.+.+||+++++++....
T Consensus 517 ~Gl~~~~~~~~~~-~~~~~~~~~~l-~~~~i~~i~~d~~g~lWigT~--~Gl~~~d~~~~~~~~~~~ 579 (795)
T 4a2l_A 517 EGLSVFKQEGLDI-QKASILPVSNV-TKLFTNCIYEASNGIIWVGTR--EGFYCFNEKDKQIKRYNT 579 (795)
T ss_dssp SCEEEEEEETTEE-EECCCSCSCGG-GGSCEEEEEECTTSCEEEEES--SCEEEEETTTTEEEEECG
T ss_pred CceEEEeCCCCeE-EEecCCCCCCC-CCCeeEEEEECCCCCEEEEeC--CCceeECCCCCcEEEeCC
Confidence 3478999998888 44321100000 1111122222 2578887543 479999999999888753
No 62
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.68 E-value=0.048 Score=52.62 Aligned_cols=150 Identities=9% Similarity=-0.022 Sum_probs=85.9
Q ss_pred EEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCc
Q 013797 190 LIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMR 268 (436)
Q Consensus 190 iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p 268 (436)
+|+.|+......++++|+.+++++.+..++.+....+++.. ++.+++.++.+ ..+.++|+.+++........
T Consensus 91 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~ 163 (433)
T 3bws_A 91 YRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-------EGMDVLDINSGQTVRLSPPE 163 (433)
T ss_dssp EEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-------SSEEEEETTTCCEEEECCCH
T ss_pred eeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-------CeEEEEECCCCeEeeecCcc
Confidence 34444444445899999988776665544333322222222 67888877643 24889999988766543322
Q ss_pred c---CCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEe
Q 013797 269 Q---RRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLE 341 (436)
Q Consensus 269 ~---~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~g 341 (436)
. .......+.+ ++++++.++. ...+.+||+.+++-...-... ......++.. +..+|+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~ 230 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKATVDLT-------GKWSKILLYDPIRDLVYCSN 230 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEEEEECS-------SSSEEEEEEETTTTEEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEEEEcCC-------CCCeeEEEEcCCCCEEEEEe
Confidence 1 1111222333 7888888863 346899999876543221111 1111223333 34677777
Q ss_pred cCCCeEEEEECCCCcEEE
Q 013797 342 TSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 342 g~~~~i~~yd~~~~~W~~ 359 (436)
...+.|.+||+.+.+...
T Consensus 231 ~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 231 WISEDISVIDRKTKLEIR 248 (433)
T ss_dssp TTTTEEEEEETTTTEEEE
T ss_pred cCCCcEEEEECCCCcEEE
Confidence 667899999998876544
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.12 Score=48.28 Aligned_cols=190 Identities=7% Similarity=-0.028 Sum_probs=97.6
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--C--CEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--G--TFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++..++.|+. ...+.+||....++..+..+........+..+ + +.+++.|+.++ .+.+||..+++|.
T Consensus 22 ~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-------~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 22 YGKRLATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-------KVLIWKEENGRWS 92 (379)
T ss_dssp SSSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-------CEEEEEEETTEEE
T ss_pred CCCEEEEEEC--CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC-------EEEEEEcCCCcee
Confidence 4445555543 34577888776666555444322222233333 2 56666666542 4788999988876
Q ss_pred eCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-----
Q 013797 263 SLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV----- 333 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~----- 333 (436)
.+..+.........+.+ + +.+++.|+. ...+.+||+.+..-.....+.. .......++..
T Consensus 93 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENGTTSPIIIDA-----HAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTSCCCEEEEEC-----CTTCEEEEEECCCC--
T ss_pred EeeeecCCCcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCCceeeEEecC-----CCCceEEEEEcCcccc
Confidence 65433322222222322 2 556666663 3467889987763111100000 00001111111
Q ss_pred ---------CCEEEEEecCCCeEEEEECCCC--cEEEcccCCCccCCCCCceEEEEEeC---CEEEEEcCCCCCCCCcEE
Q 013797 334 ---------NNELYSLETSSNELRVYLKDSN--SWKNLGLVPVRADFNRGWGIAFKSLG---NELLVIGASSTSSHESMA 399 (436)
Q Consensus 334 ---------~g~lyv~gg~~~~i~~yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~~---~~l~v~GG~~~~~~~~~~ 399 (436)
++.+++.|+..+.|.+||..+. .+..+..+..- ......+++ ..+ +.+++.|+.++ .+.
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h--~~~v~~~~~-sp~~~~~~~l~s~~~dg----~i~ 234 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAW-SPTVLLRSYLASVSQDR----TCI 234 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC--SSCEEEEEE-CCCCSSSEEEEEEETTS----CEE
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc--cCcEeEEEE-CCCCCCCCeEEEEeCCC----EEE
Confidence 4677888887889999998654 35554433311 111112222 223 67888887763 566
Q ss_pred EEee
Q 013797 400 IYTC 403 (436)
Q Consensus 400 ~y~~ 403 (436)
+|.+
T Consensus 235 iwd~ 238 (379)
T 3jrp_A 235 IWTQ 238 (379)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 7743
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.63 E-value=0.15 Score=47.73 Aligned_cols=224 Identities=9% Similarity=0.057 Sum_probs=106.3
Q ss_pred EEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCc
Q 013797 145 FMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRC 223 (436)
Q Consensus 145 ~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~ 223 (436)
++.......+..||..+.++..+..+..+.... .++. ..++.+++.|+. ...+.+||..++++.....+.....
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~ 97 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQV---TGVDWAPDSNRIVTCGT--DRNAYVWTLKGRTWKPTLVILRINR 97 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEECCSSCE---EEEEEETTTTEEEEEET--TSCEEEEEEETTEEEEEEECCCCSS
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcc---cEEEEeCCCCEEEEEcC--CCeEEEEECCCCeeeeeEEeecCCC
Confidence 333334667888998887654443333221111 1122 224555555553 3468889998887655433222222
Q ss_pred ccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeCCCCccCC-cceeEEEE--CCEEEEEeccCCCCCcCC
Q 013797 224 LFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSLPGMRQRR-KLCSGCYM--DNKFYVIGGRNEKDKPLT 297 (436)
Q Consensus 224 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r-~~~~~~~~--~g~iyv~gG~~~~~~~~~ 297 (436)
....+.+ ++..++.|+.++ .+.+||..+.. |........+. .....+.+ ++++++.|+.+ .
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD------F 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT------S
T ss_pred ceeEEEECCCCCEEEEEeCCC-------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC------C
Confidence 2222222 455666665432 36666665544 32221111111 11122222 56677777643 3
Q ss_pred EEEEEECCCCc---------E-------EEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEE
Q 013797 298 CGEAYDEYAGT---------W-------YHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 298 ~v~~yD~~~~~---------W-------~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
.+..||..... | ..+..+. ........+.. ++..++.++..+.|.+||..+.+-..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CEEEEEcccccccccccccccccccchhhheEecC------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 57888864211 1 1111111 00011112222 56677777778899999998765332
Q ss_pred cccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 360 LGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 360 v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
. +... ......+++ ..++++++.| .+ ..+.+|.
T Consensus 239 ~--~~~~--~~~v~~~~~-~~~~~~l~~~-~d----~~i~i~~ 271 (372)
T 1k8k_C 239 T--LASE--TLPLLAVTF-ITESSLVAAG-HD----CFPVLFT 271 (372)
T ss_dssp E--EECS--SCCEEEEEE-EETTEEEEEE-TT----SSCEEEE
T ss_pred E--EccC--CCCeEEEEE-ecCCCEEEEE-eC----CeEEEEE
Confidence 2 1111 011122332 3467766666 44 3566774
No 65
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.59 E-value=0.17 Score=46.04 Aligned_cols=237 Identities=8% Similarity=-0.086 Sum_probs=119.8
Q ss_pred eEEEeccCCCeEEEEecCCCC--eEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCC
Q 013797 143 SVFMLASGDSSWWAFDRHFQT--RRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSM 218 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~ 218 (436)
.+++.......+.++|+.+++ |+.-.. .. ...+...+..+|.+++.+ ...++.||+ +++ |+.-.+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~--~~---~~~~~~~~~pdG~ilvs~----~~~V~~~d~-~G~~~W~~~~~- 74 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLE--KG---WECNSVAATKAGEILFSY----SKGAKMITR-DGRELWNIAAP- 74 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECC--TT---CCCCEEEECTTSCEEEEC----BSEEEEECT-TSCEEEEEECC-
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCC--cc---CCCcCeEECCCCCEEEeC----CCCEEEECC-CCCEEEEEcCC-
Confidence 344444456788899987765 543221 10 011122444577888742 356999999 665 765432
Q ss_pred CCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeC--CCC--ccCCcceeEEEECCEEEEEeccCCC
Q 013797 219 RRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSL--PGM--RQRRKLCSGCYMDNKFYVIGGRNEK 292 (436)
Q Consensus 219 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~--~~~--p~~r~~~~~~~~~g~iyv~gG~~~~ 292 (436)
.....+++.. -++.+++..... ...+..+|+.... |+.- ... +...........+|.+++...
T Consensus 75 -~~~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---- 143 (276)
T 3no2_A 75 -AGCEMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---- 143 (276)
T ss_dssp -TTCEEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET----
T ss_pred -CCccccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec----
Confidence 1111223333 366666664321 1247778874332 4321 111 111111223344677776653
Q ss_pred CCcCCEEEEEECCCC-cEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCC--cEEEcc-cCCCcc
Q 013797 293 DKPLTCGEAYDEYAG-TWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSN--SWKNLG-LVPVRA 367 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~-~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~--~W~~v~-~~p~~~ 367 (436)
....+.+||++-+ .|+.-.... + +++.. .+|.+++.+...+.|..+|++++ .|+.-. .++...
T Consensus 144 --~~~~v~~~d~~G~~~w~~~~~~~-------~---~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 144 --ATSEVREIAPNGQLLNSVKLSGT-------P---FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp --TTTEEEEECTTSCEEEEEECSSC-------C---CEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred --CCCEEEEECCCCCEEEEEECCCC-------c---cceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 2356899999733 466433211 1 12333 36788888766668999999965 466532 122110
Q ss_pred CCCCCceEEEEEeCCEEEEEc--CCCCC--CCCcEEEEeecCCCCCCccCcEEee
Q 013797 368 DFNRGWGIAFKSLGNELLVIG--ASSTS--SHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~v~G--G~~~~--~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
......+....+|.+||.. |.... ......+|.++++ ++..|+.-.
T Consensus 212 --l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~---g~~~W~~~~ 261 (276)
T 3no2_A 212 --LFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSE---GKVVWQLND 261 (276)
T ss_dssp --CSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTT---SBEEEEECC
T ss_pred --ccccccceEcCCCCEEEEeccCccccccccCCceEEEECCC---CCEEEEecC
Confidence 1111122235688899886 44310 0012345555542 344676533
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.58 E-value=0.23 Score=46.28 Aligned_cols=188 Identities=10% Similarity=0.033 Sum_probs=89.6
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCC-EEeCCCCCC--CCccc
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNN-WFKGPSMRR--PRCLF 225 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~~p~--~r~~~ 225 (436)
....+..||..+.++.....+....... .++. ..++..++.|+.. ..+.+||..+.+ |.....+.. ...-.
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~l~~~~~d--~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAA---RCVRWAPNEKKFAVGSGS--RVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCE---EEEEECTTSSEEEEEETT--SSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCce---eEEEECCCCCEEEEEeCC--CEEEEEEecCCCcceeeeeeecccCCCee
Confidence 3456778888777655432222111111 0112 2245555565533 456666666554 322222111 11112
Q ss_pred EEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCC---------eE-------eCCCCccCCcceeEEEE--CCEEEEE
Q 013797 226 ASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKS---------WD-------SLPGMRQRRKLCSGCYM--DNKFYVI 286 (436)
Q Consensus 226 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---------W~-------~~~~~p~~r~~~~~~~~--~g~iyv~ 286 (436)
+++.. ++..++.|+.++ .+.+||..... |. .+..+.........+.+ ++.+++.
T Consensus 147 ~~~~~~~~~~l~~~~~dg-------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDF-------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp EEEECTTSSEEEEEETTS-------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEcCCCCEEEEEcCCC-------CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE
Confidence 22222 556666666442 47788854211 11 11111111111122222 5556666
Q ss_pred eccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCC--CcEEEcccC
Q 013797 287 GGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIA-VVNNELYSLETSSNELRVYLKDS--NSWKNLGLV 363 (436)
Q Consensus 287 gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~~~i~~yd~~~--~~W~~v~~~ 363 (436)
++. -..+..||..+.+-...-... ......++ .-++.+++.| ..+.+.+||..+ ++|..+..+
T Consensus 220 ~~~------d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~ 285 (372)
T 1k8k_C 220 VSH------DSTVCLADADKKMAVATLASE-------TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL 285 (372)
T ss_dssp EET------TTEEEEEEGGGTTEEEEEECS-------SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred EeC------CCEEEEEECCCCceeEEEccC-------CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence 653 346889998776532211111 00111222 2367766666 678899999988 889877544
No 67
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.55 E-value=0.00082 Score=63.41 Aligned_cols=43 Identities=28% Similarity=0.217 Sum_probs=38.7
Q ss_pred CCCCCChHHHHHHhhccCCcccccccccccHhhhhhhccchhH
Q 013797 89 SFVPSLSDELEVLIVARVPRAEYWKFYLLNKRFLSLLKSGELF 131 (436)
Q Consensus 89 ~~~~~LPddl~~~ILarLP~~~l~~~~~Vck~w~~li~s~~f~ 131 (436)
..|..||+|++.+|+.+|+..++.+++.|||+|+.++.++.++
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 4588999999999999999999999999999999998776643
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.53 E-value=0.077 Score=51.50 Aligned_cols=182 Identities=12% Similarity=0.128 Sum_probs=97.9
Q ss_pred EEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 184 LCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 184 ~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
+..++..++.|+. ...+.+||..+.+-... +........+..+++.+++.|+.++ .+.+||..+++-..
T Consensus 139 ~~~d~~~l~~g~~--dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg-------~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 139 LQYDDQKIVSGLR--DNTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS-------TVRVWDVNTGEMLN 207 (435)
T ss_dssp EECCSSEEEEEES--SSCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS-------CEEEEESSSCCEEE
T ss_pred EEECCCEEEEEeC--CCeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC-------eEEEEECCCCcEEE
Confidence 3346666666653 35689999988764332 1112222334445777777777543 48889998876432
Q ss_pred CCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEc-CCCCCCCCCCCCCCCCEEEEECCEEEEEec
Q 013797 264 LPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHI-PDILKDFPAETGKSPPLIAVVNNELYSLET 342 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v-~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg 342 (436)
. +........++..++.+++.|+.+ ..+.+||..+..-... ..+. ........+..++..++.|+
T Consensus 208 ~--~~~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~l~s~~ 273 (435)
T 1p22_A 208 T--LIHHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRVLV------GHRAAVNVVDFDDKYIVSAS 273 (435)
T ss_dssp E--ECCCCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEEEC------CCSSCEEEEEEETTEEEEEE
T ss_pred E--EcCCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeEec------CCCCcEEEEEeCCCEEEEEe
Confidence 2 111111222333455566667643 3578899876642111 1111 01111223344677777777
Q ss_pred CCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 343 SSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 343 ~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
..+.|.+||..+.+-... +.. ....+..+..++.+++.|+.++ .+.+|
T Consensus 274 ~dg~i~vwd~~~~~~~~~--~~~-----~~~~v~~~~~~~~~l~~g~~dg----~i~iw 321 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRT--LNG-----HKRGIACLQYRDRLVVSGSSDN----TIRLW 321 (435)
T ss_dssp TTSEEEEEETTTCCEEEE--EEC-----CSSCEEEEEEETTEEEEEETTS----CEEEE
T ss_pred CCCeEEEEECCcCcEEEE--EcC-----CCCcEEEEEeCCCEEEEEeCCC----eEEEE
Confidence 788999999987643321 111 1111333344667777777663 45566
No 69
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.50 E-value=0.53 Score=43.70 Aligned_cols=177 Identities=9% Similarity=0.014 Sum_probs=90.5
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCC--CeEeCCCC------ccC
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETK--SWDSLPGM------RQR 270 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~------p~~ 270 (436)
..++++|+.+++....-....-..-+.+++- ++.+|+.... ...+.+||+... .-..+... ...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 3689999988875432110000111233332 6779988643 246889998765 22222211 011
Q ss_pred Cccee-EEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCC-CCC-CCCCCCEEEEE-C-CEEEEEecC
Q 013797 271 RKLCS-GCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDF-PAE-TGKSPPLIAVV-N-NELYSLETS 343 (436)
Q Consensus 271 r~~~~-~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~-~~~-~~r~~~~~~~~-~-g~lyv~gg~ 343 (436)
...+. .++. ++.||+..++ ....|.+||.....-..+....... ..+ ......++++. + +.||+....
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~-----~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGY-----CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECS-----SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred cCCCcEEEEeCCCCeEEEEeCC-----CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 11222 3333 6889999752 1356899996555434333211000 000 01112344444 3 899999887
Q ss_pred CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC
Q 013797 344 SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST 392 (436)
Q Consensus 344 ~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~ 392 (436)
.+.|.+||+++++....-..+. ......+++ ...+.+|...|...
T Consensus 217 ~~~I~~~~~~~G~~~~~~~~~~--~~~~~~~~~--~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFVREIKHAS--FGRNVFAIS--YIPGFLFAVNGKPY 261 (329)
T ss_dssp TTEEEEEETTTCCEEEEECCTT--TTTCEEEEE--EETTEEEEEECCCC
T ss_pred CCEEEEEECCCCcEEEEEeccc--cCCCcceee--ecCCEEEEeCCCEE
Confidence 8899999998666544321121 111112222 33477777776543
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.49 E-value=0.094 Score=48.18 Aligned_cols=180 Identities=9% Similarity=0.053 Sum_probs=91.9
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++..++.|+. ...+.+||..+++......+...........+ ++..++.|+.++ .+.+||..+++....
T Consensus 108 ~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 108 DGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-------NIAVWDLHNQTLVRQ 178 (337)
T ss_dssp TSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEE
T ss_pred CCCEEEEEcC--CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC-------cEEEEeCCCCceeee
Confidence 4555555542 35799999998875443332222222222222 455666665432 488899987754322
Q ss_pred CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEe
Q 013797 265 PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLE 341 (436)
Q Consensus 265 ~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~g 341 (436)
+.........+.+ ++++++.++. ...+..||+.+.+-....... . ....++. -++.+++++
T Consensus 179 --~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~------~--~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 179 --FQGHTDGASCIDISNDGTKLWTGGL------DNTVRSWDLREGRQLQQHDFT------S--QIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp --ECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEEEEEECS------S--CEEEEEECTTSSEEEEE
T ss_pred --eecccCceEEEEECCCCCEEEEEec------CCcEEEEECCCCceEeeecCC------C--ceEEEEECCCCCEEEEE
Confidence 1111111222222 5666666663 346899999877533322211 1 1111222 256777777
Q ss_pred cCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 342 TSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 342 g~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
+..+.+.+||..+.+-..+..-. .....+++ ..++++++.|+.+ ..+.+|
T Consensus 243 ~~~~~i~~~~~~~~~~~~~~~~~-----~~v~~~~~-~~~~~~l~~~~~d----g~i~~~ 292 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKYQLHLHE-----SCVLSLKF-AYCGKWFVSTGKD----NLLNAW 292 (337)
T ss_dssp ETTSCEEEEETTSSCEEEECCCS-----SCEEEEEE-CTTSSEEEEEETT----SEEEEE
T ss_pred cCCCcEEEEECCCCCeEEEcCCc-----cceeEEEE-CCCCCEEEEecCC----CcEEEE
Confidence 77889999999876543332111 11112221 2346666777665 345566
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.47 E-value=0.047 Score=50.53 Aligned_cols=189 Identities=8% Similarity=-0.025 Sum_probs=96.8
Q ss_pred CCeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECCCCCE--EeCCC
Q 013797 141 EPSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELETNNW--FKGPS 217 (436)
Q Consensus 141 ~~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~t~~W--~~l~~ 217 (436)
...+|+.......+..||+.+++.......+.... . .+..- +..+|+.+. ....++++|+.+++- ..+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~----~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-D----TAITSDCSNVVVTSD--FCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-E----EEECSSSCEEEEEES--TTCEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-e----EEEcCCCCEEEEEeC--CCCeEEEEECCCCceeEEeccc
Confidence 34456655556789999999988765433332211 1 12233 445777654 235899999998874 22222
Q ss_pred CCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCC
Q 013797 218 MRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKD 293 (436)
Q Consensus 218 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~ 293 (436)
...+. ++++.. +..+| ++...+ ....+.+||..+++-... ++.....+..++. +| .+|+.+...
T Consensus 82 ~~~~~--~~~~~s~dg~~l~-~~~~~~----~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~--- 149 (331)
T 3u4y_A 82 GQSSM--ADVDITPDDQFAV-TVTGLN----HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNGLILIDRSS--- 149 (331)
T ss_dssp CSSCC--CCEEECTTSSEEE-ECCCSS----SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSCEEEEEETT---
T ss_pred CCCCc--cceEECCCCCEEE-EecCCC----CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCEEEEEecCC---
Confidence 22222 212222 34566 432221 122699999988765432 1222112233332 45 477765421
Q ss_pred CcCCE-EEEEECCCCc-EEEc--CCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCcE
Q 013797 294 KPLTC-GEAYDEYAGT-WYHI--PDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 294 ~~~~~-v~~yD~~~~~-W~~v--~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~~W 357 (436)
.. +.+||...+. -... ..++ .......++.. +| .+|+.+...+.|.+||+++.+.
T Consensus 150 ---~~~i~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 ---ANTVRRFKIDADGVLFDTGQEFIS------GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp ---TTEEEEEEECTTCCEEEEEEEEEC------SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ---CceEEEEEECCCCcEeecCCcccc------CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 23 6667655431 1111 0011 11111122222 45 4888876678999999987765
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.45 E-value=0.42 Score=43.02 Aligned_cols=181 Identities=12% Similarity=0.072 Sum_probs=94.9
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCC---CC-CcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR---RP-RCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p---~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
.++.+|+.+.. ...+.+||+.......++... .. ..-..++. -++.+|+.+... ...+.+||+...
T Consensus 39 ~~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~i~~~d~~g~ 110 (286)
T 1q7f_A 39 AQNDIIVADTN--NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQIQIYNQYGQ 110 (286)
T ss_dssp TTCCEEEEEGG--GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCEEEEECTTSC
T ss_pred CCCCEEEEECC--CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCEEEEECCCCc
Confidence 35778887532 357999998855444443211 11 11223343 267899886421 235888996544
Q ss_pred CeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEE
Q 013797 260 SWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNEL 337 (436)
Q Consensus 260 ~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~l 337 (436)
.-..+...... ...+.++ -+|++|+... ....+.+||+.......+.... ......++++. +|+|
T Consensus 111 ~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~~~~~~~~------~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 111 FVRKFGATILQ-HPRGVTVDNKGRIIVVEC------KVMRVIIFDQNGNVLHKFGCSK------HLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEEECTTTCS-CEEEEEECTTSCEEEEET------TTTEEEEECTTSCEEEEEECTT------TCSSEEEEEECSSSEE
T ss_pred EEEEecCccCC-CceEEEEeCCCCEEEEEC------CCCEEEEEcCCCCEEEEeCCCC------ccCCcEEEEECCCCCE
Confidence 33333221111 1122222 2678988764 2356899998765544442211 00111223332 5799
Q ss_pred EEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 338 YSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 338 yv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
|+.+...+.|.+||+..+.-..+..-.. ...-.++++ ..+|+||+.....
T Consensus 178 ~v~~~~~~~i~~~~~~g~~~~~~~~~g~---~~~p~~i~~-d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEGQYLRQIGGEGI---TNYPIGVGI-NSNGEILIADNHN 227 (286)
T ss_dssp EEEEGGGTEEEEEETTCCEEEEESCTTT---SCSEEEEEE-CTTCCEEEEECSS
T ss_pred EEEECCCCEEEEEcCCCCEEEEEccCCc---cCCCcEEEE-CCCCCEEEEeCCC
Confidence 9987767899999997765444432110 011122332 3457888876443
No 73
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.40 E-value=1.1 Score=46.43 Aligned_cols=208 Identities=16% Similarity=0.157 Sum_probs=110.6
Q ss_pred CeEEEeccCCCeEEEEecCCCC--eEeCCCCCCCC----CccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EE
Q 013797 142 PSVFMLASGDSSWWAFDRHFQT--RRKLPELPSDP----CFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WF 213 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~----~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~ 213 (436)
..+|+... ...++++|..+++ |+.-...+... +........+..++.||+.. ....++.+|..|++ |+
T Consensus 78 g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~---~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 78 GIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA---WDGRLIALDAATGKEVWH 153 (677)
T ss_dssp TEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC---TTSEEEEEETTTCCEEEE
T ss_pred CEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc---CCCEEEEEECCCCCEEee
Confidence 33444432 4578899988754 76644332110 00011123556788998864 23579999999887 87
Q ss_pred eCCC--CCC-CCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCccC------------------
Q 013797 214 KGPS--MRR-PRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQR------------------ 270 (436)
Q Consensus 214 ~l~~--~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~------------------ 270 (436)
.-.. ... .....+.++.++.+|+..+..... ....+..||..+++ |+.-...+..
T Consensus 154 ~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~--~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG--VRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC--CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEEECCEEEEEecccccC--CCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 5422 111 111223345688888765432211 24578999999887 8653211110
Q ss_pred --C-----c----ceeEEE--ECCEEEEEeccC------------CCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCC
Q 013797 271 --R-----K----LCSGCY--MDNKFYVIGGRN------------EKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAET 323 (436)
Q Consensus 271 --r-----~----~~~~~~--~~g~iyv~gG~~------------~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~ 323 (436)
. . ....++ .++.+|+-.+.. +...+...+.++|+.++ .|+.-......... .
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~-~ 310 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY-T 310 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC-C
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc-c
Confidence 0 0 011222 267788765432 22224567999999988 58743211100000 0
Q ss_pred CCCCCEEEE--ECC---EEEEEecCCCeEEEEECCCCc
Q 013797 324 GKSPPLIAV--VNN---ELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 324 ~r~~~~~~~--~~g---~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.-..+.++- .+| .+++++...+.++++|.++++
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 112233332 256 566666667788889888764
No 74
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.40 E-value=0.15 Score=47.05 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=90.3
Q ss_pred EEEeccCCCeEEEEecC-CCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECC--CCCEEeCCCCC
Q 013797 144 VFMLASGDSSWWAFDRH-FQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELE--TNNWFKGPSMR 219 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~-~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~--t~~W~~l~~~p 219 (436)
+|+.......+..||.. +++...+...+....... ....- +..||+.+.. ...+.+|+.. +++++.+..++
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQP---MVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCC---EEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCce---EEECCCCCEEEEeecC--CCeEEEEEecCCCCceeeccccc
Confidence 44433345677788774 444443322221111111 12222 4456665432 2567777665 77887665443
Q ss_pred CCCcccEEEEe-CC-EEEEEcCcCCCCCCccceEEEEeCCCCC-eEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCCC
Q 013797 220 RPRCLFASATC-GT-FAFVAGGHGMDGSGVLNSAERYNPETKS-WDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKDK 294 (436)
Q Consensus 220 ~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~~ 294 (436)
.+.....++.. ++ .+|+.+..+ ..+.+||...+. ...+...+........++. ++ .+|+.+..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----- 149 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNA-------GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK----- 149 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTT-------TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-----
T ss_pred cCCCCcEEEEcCCCCEEEEEecCC-------CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-----
Confidence 32222333332 33 466665322 347778774221 2222111111111222222 34 57766532
Q ss_pred cCCEEEEEECCC-CcEEEcC--CCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECC--CCcEEE
Q 013797 295 PLTCGEAYDEYA-GTWYHIP--DILKDFPAETGKSPPLIAVV--NN-ELYSLETSSNELRVYLKD--SNSWKN 359 (436)
Q Consensus 295 ~~~~v~~yD~~~-~~W~~v~--~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg~~~~i~~yd~~--~~~W~~ 359 (436)
...+.+||+.+ ++...+. ..... .. ..+..+.+ ++ .+|+.+...+.+.+||.. +.+++.
T Consensus 150 -~~~v~~~d~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 150 -QDRICLFTVSDDGHLVAQDPAEVTTV----EG-AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC 216 (343)
T ss_dssp -GTEEEEEEECTTSCEEEEEEEEEECS----TT-CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE
T ss_pred -CCEEEEEEecCCCceeeecccccccC----CC-CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 34688999887 6665432 11100 01 11112223 44 577777667889999984 455543
No 75
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.39 E-value=0.096 Score=50.43 Aligned_cols=197 Identities=10% Similarity=-0.055 Sum_probs=100.7
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCee-eEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKE-SLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR 220 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~-~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~ 220 (436)
..+++.......+..||+.+++.....+......+...... ....++.+++.++. ...+.+||+.+.+....-.. .
T Consensus 134 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--d~~v~~~d~~~~~~~~~~~~-~ 210 (433)
T 3bws_A 134 TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ--ANAVHVFDLKTLAYKATVDL-T 210 (433)
T ss_dssp SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG--GTEEEEEETTTCCEEEEEEC-S
T ss_pred CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC--CCEEEEEECCCceEEEEEcC-C
Confidence 34444444455789999998877654332211011100001 12237788877653 35799999988764322111 1
Q ss_pred CCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCC--c
Q 013797 221 PRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDK--P 295 (436)
Q Consensus 221 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~--~ 295 (436)
......++.. +..+|+.++.+ ..+.+||+.+++....-.. ......++.. +++.+++++...... .
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWIS-------EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTT-------TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred CCCeeEEEEcCCCCEEEEEecCC-------CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 1111222222 45677776533 2589999988765432111 1111222222 454444444322110 1
Q ss_pred CCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCcEE
Q 013797 296 LTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 296 ~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
...+.+||+.+++-......+ . ....++.. ++ .+|+.+...+.+.+||..+.+-.
T Consensus 282 dg~i~~~d~~~~~~~~~~~~~------~--~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIGPP------G--NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp CEEEEEEETTTTEEEEEEEEE------E--CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCcEEeeccCC------C--CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 347889999887543332111 0 11112222 34 68888877889999999876533
No 76
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.39 E-value=0.5 Score=42.24 Aligned_cols=189 Identities=8% Similarity=-0.075 Sum_probs=103.9
Q ss_pred CCeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCCC
Q 013797 141 EPSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSM 218 (436)
Q Consensus 141 ~~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~ 218 (436)
...+|+.-.....++.+|+....-..+.... .... ..++. .++.||+... ....+.++++....-+.+.+.
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--~~~p---~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~ 119 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEPTTIIRQD--LGSP---EGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQRRVLFDT 119 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCCEEEECTT--CCCE---EEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCEEEEEecCCCCcEEEEECC--CCCc---cEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCEEEEEEC
Confidence 3455655445678888998765433221111 0111 12333 2689998753 346799999875443332211
Q ss_pred CCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeE-EEE--CCEEEEEeccCCCC
Q 013797 219 RRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSG-CYM--DNKFYVIGGRNEKD 293 (436)
Q Consensus 219 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~-~~~--~g~iyv~gG~~~~~ 293 (436)
.... -..+++- ++.||+..... ....++++++....-+.+.... ...+.. ++- ++.||+...
T Consensus 120 ~~~~-P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~lyv~d~----- 186 (267)
T 1npe_A 120 GLVN-PRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLCWVDA----- 186 (267)
T ss_dssp SCSS-EEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEEEEET-----
T ss_pred CCCC-ccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEEEEEC-----
Confidence 1111 1233333 68999986321 1246888887654333331111 112223 332 578999864
Q ss_pred CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE
Q 013797 294 KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
..+.+.+||+....-..+... .....+++..++.||+.....+.|.++|+++.+-.
T Consensus 187 -~~~~I~~~~~~g~~~~~~~~~--------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 187 -GTHRAECLNPAQPGRRKVLEG--------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp -TTTEEEEEETTEEEEEEEEEC--------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred -CCCEEEEEecCCCceEEEecC--------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 346789999976432222111 11123566678999999877789999999876543
No 77
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.39 E-value=0.13 Score=52.02 Aligned_cols=241 Identities=11% Similarity=0.003 Sum_probs=117.1
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeee-EEe-CCEEEEEceecCCCeEEEEEC--CCCCEEeCCCC
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKES-LCA-GTHLIVSGNEIEGGVIWRYEL--ETNNWFKGPSM 218 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~-~~~-~~~iyv~GG~~~~~~v~~ydp--~t~~W~~l~~~ 218 (436)
.+++.......+..+|..+.+....-+.... . +.+ .+- +..+|+.+. ...+.+||+ .+.+-. ..+
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~---~---~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~--~~i 218 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA---V---HISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKV--AEI 218 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTT---E---EEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEE--EEE
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcc---c---ceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEE--EEE
Confidence 4555555567888999988765432221111 1 112 232 456776653 278999999 666532 222
Q ss_pred CCCCcccEEEEe-----CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCc--c------CCcceeEEEE---C
Q 013797 219 RRPRCLFASATC-----GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMR--Q------RRKLCSGCYM---D 280 (436)
Q Consensus 219 p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p--~------~r~~~~~~~~---~ 280 (436)
+....-..++.. ++ .+|+.+ .. ...+.++|..+.+-.. ++... . +.....++.. +
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~-~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGA-YW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEE-EE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEE-cc------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 222222333332 44 455543 21 2457889988766322 21111 0 0001122222 3
Q ss_pred CEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCE-EEEEecCCCeEEEEECCCCcEE
Q 013797 281 NKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNE-LYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 281 g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~-lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
+.+|+... ....+..+|..+.+-..+..++ ..+..+.++.. +|+ +|+.+...+.|.++|.++++-.
T Consensus 292 ~~~~vs~~------~~g~i~vvd~~~~~~l~~~~i~------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 292 PEFIVNVK------ETGKVLLVNYKDIDNLTVTSIG------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp SEEEEEET------TTTEEEEEECTTSSSCEEEEEE------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CEEEEEEC------CCCeEEEEEecCCCcceeEEec------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 45555442 2457889998765321111111 11112222322 455 5666555789999999988644
Q ss_pred EcccCCCccCCCCCceEEEEEe-CCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEeec
Q 013797 359 NLGLVPVRADFNRGWGIAFKSL-GNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLEC 419 (436)
Q Consensus 359 ~v~~~p~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~~ 419 (436)
.. ++....+..+.++.+..- ++.+|+.+.... ..+.+|..+++.. ....|+.+..
T Consensus 360 ~~--i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d---~~V~v~d~~~~~~-~~~~~~~v~~ 415 (543)
T 1nir_A 360 AL--VDVGKTPHPGRGANFVHPKYGPVWSTSHLGD---GSISLIGTDPKNH-PQYAWKKVAE 415 (543)
T ss_dssp EE--EECSSSBCCTTCEEEEETTTEEEEEEEBSSS---SEEEEEECCTTTC-TTTBTSEEEE
T ss_pred Ee--eccCCCCCCCCCcccCCCCCccEEEeccCCC---ceEEEEEeCCCCC-chhcCeEEEE
Confidence 32 221111122223443222 478888765321 4677885444211 1234877663
No 78
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.33 E-value=0.15 Score=46.53 Aligned_cols=189 Identities=9% Similarity=-0.036 Sum_probs=95.7
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeC-CEEEEEceecCCCeEEEEECCCCCEEeC-CCCCCC---Cc
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAG-THLIVSGNEIEGGVIWRYELETNNWFKG-PSMRRP---RC 223 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~-~~iyv~GG~~~~~~v~~ydp~t~~W~~l-~~~p~~---r~ 223 (436)
....++.||+.++++..+.. +...........++ ..+ +.||+... ...+++||+. ++...+ ...... ..
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---RLGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp ECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---TTEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---CCCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 34678899998888765432 10000000001122 235 78888753 2379999998 887766 332111 11
Q ss_pred ccEEEE-eCCEEEEEcCcCC--------CCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-----CC-EEEEEec
Q 013797 224 LFASAT-CGTFAFVAGGHGM--------DGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-----DN-KFYVIGG 288 (436)
Q Consensus 224 ~~~~~~-~~~~iyv~GG~~~--------~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-----~g-~iyv~gG 288 (436)
...++. -++.+|+...... ........+++||+. ++...+.. ........+.. ++ .+|+...
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESSEEEEEEEECTTSCEEEEEEEET
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCCCcceEEEecccCCCCCEEEEEEC
Confidence 223333 2678888764321 000012468889987 55544311 00111223333 34 4777653
Q ss_pred cCCCCCcCCEEEEEECC-CCcEEEc---CCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCc
Q 013797 289 RNEKDKPLTCGEAYDEY-AGTWYHI---PDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 289 ~~~~~~~~~~v~~yD~~-~~~W~~v---~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
....+.+||+. +++.... ..++.. .......++.. +|.||+.....+.|.+||+++.+
T Consensus 196 ------~~~~i~~~~~~~~g~~~~~~~~~~~~~~----~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 196 ------PTKKLWSYDIKGPAKIENKKVWGHIPGT----HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp ------TTTEEEEEEEEETTEEEEEEEEEECCCC----SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred ------CCCeEEEEECCCCCccccceEEEECCCC----CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 23568889876 4443211 112110 00011123332 57899886556789999998543
No 79
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.32 E-value=0.82 Score=46.64 Aligned_cols=120 Identities=13% Similarity=0.131 Sum_probs=71.9
Q ss_pred eEEeCCEEEEEceecCCCeEEEEEC-CCCC--EEeCCCCCC-----C---CcccEEEE--eCCE----EEEEcCcCCCCC
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYEL-ETNN--WFKGPSMRR-----P---RCLFASAT--CGTF----AFVAGGHGMDGS 245 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp-~t~~--W~~l~~~p~-----~---r~~~~~~~--~~~~----iyv~GG~~~~~~ 245 (436)
-+..++.||+.... ...++.+|. .|++ |+.-..... . ......++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~--~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------ 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF--PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------ 129 (599)
T ss_dssp CEEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------
T ss_pred cEEECCEEEEEeCC--CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------
Confidence 35679999998541 357999999 8886 887554321 1 11123344 5777 887642
Q ss_pred CccceEEEEeCCCCC--eEeC-CCCccC-CcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEcC
Q 013797 246 GVLNSAERYNPETKS--WDSL-PGMRQR-RKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHIP 313 (436)
Q Consensus 246 ~~~~~~~~yd~~t~~--W~~~-~~~p~~-r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v~ 313 (436)
...+..+|..|++ |+.- ...... ....+.++.++++|+-.+....+ ....+.+||.+++ .|+.-.
T Consensus 130 --dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g-~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 --DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG-VRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGT-CCCEEEEEETTTCCEEEEEES
T ss_pred --CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccC-CCCeEEEEECCCCcEEEEEcC
Confidence 1258889998886 8753 221111 11223456799988754311111 2457899999987 487643
No 80
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.29 E-value=0.15 Score=48.14 Aligned_cols=182 Identities=11% Similarity=0.045 Sum_probs=90.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe---CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++..++.|+. ...+.+||..+++-... +........++.+ +..+++.|+.++ .+.++|..+.+-..
T Consensus 138 dg~~l~sgs~--d~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~-------~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 138 SGTQAVSGSK--DICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN-------RILLWDTRCPKPAS 206 (344)
T ss_dssp TSSEEEEEET--TSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS-------CEEEEETTSSSCEE
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeecccc-------ccccccccccceee
Confidence 5566666653 34688999988764321 1111111122222 335677766543 47889998776432
Q ss_pred CCCCccCCcceeEE-EE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CC-EE
Q 013797 264 LPGMRQRRKLCSGC-YM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NN-EL 337 (436)
Q Consensus 264 ~~~~p~~r~~~~~~-~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g-~l 337 (436)
.-..........++ .. ++++++.|+.+ ..+..||+.+++- +..+. ........+.+ ++ ++
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~--~~~~~------~h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSC--VLSSA------VHSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETT------SEEEEEESCC--C--CEEEE------CCSSCEEEEEECSSSSCC
T ss_pred eeecceeeccceeeeecCCCCcceEEeccC------CcEEEEECCCCcE--EEEEc------CCCCCEEEEEEccCCCeE
Confidence 21111111111222 22 45677777643 4578899876541 11111 00011112222 34 56
Q ss_pred EEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 338 YSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 338 yv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
++.|+..+.|.+||..+++-..+. . ....-.++++...+..|++.||.+ ..+.+|.
T Consensus 273 lasgs~D~~i~vwd~~~~~~~~~~--~---H~~~V~~v~~sp~~~~llas~s~D----~~v~~w~ 328 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSELFRSQ--A---HRDFVRDATWSPLNHSLLTTVGWD----HQVVHHV 328 (344)
T ss_dssp EEEEETTSCEEEECTTCCEEEEEC--C---CSSCEEEEEECSSSTTEEEEEETT----SCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEc--C---CCCCEEEEEEeCCCCeEEEEEcCC----CeEEEEE
Confidence 666777789999999887543321 1 111112233222355677788877 3666773
No 81
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.27 E-value=0.31 Score=44.59 Aligned_cols=221 Identities=11% Similarity=0.076 Sum_probs=110.9
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC-
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR- 220 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~- 220 (436)
..+++.-.....++.||+.++.-..+. .+... . ..+...++.+|+.. ...+++||+.+++++.+.....
T Consensus 25 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~--~---~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~~~~~ 94 (297)
T 3g4e_A 25 NSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPV--S---SVALRQSGGYVATI----GTKFCALNWKEQSAVVLATVDND 94 (297)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEE-CSSCE--E---EEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEECCTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEe-CCCce--E---EEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEecCCC
Confidence 345555445678899999887654332 11110 0 01222356666643 3579999999998877654322
Q ss_pred -CCcccEEEEe--CCEEEEEcCcCCC----CCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CC-EEEEEeccC
Q 013797 221 -PRCLFASATC--GTFAFVAGGHGMD----GSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DN-KFYVIGGRN 290 (436)
Q Consensus 221 -~r~~~~~~~~--~~~iyv~GG~~~~----~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g-~iyv~gG~~ 290 (436)
+........+ ++++|+..-.... .......++++|+. ++...+. ..........+ ++ .+|+...
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~---~~~~~pngi~~spdg~~lyv~~~-- 168 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYF---DQVDISNGLDWSLDHKIFYYIDS-- 168 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEE---EEESBEEEEEECTTSCEEEEEEG--
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEe---eccccccceEEcCCCCEEEEecC--
Confidence 1111222222 6777774321110 00123468888875 3333221 11111222232 34 5888764
Q ss_pred CCCCcCCEEEEEEC--CCCcEEE---cCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCC
Q 013797 291 EKDKPLTCGEAYDE--YAGTWYH---IPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVP 364 (436)
Q Consensus 291 ~~~~~~~~v~~yD~--~~~~W~~---v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p 364 (436)
..+.+++||. .++.... +..++. ......++++. +|.||+.....+.|.+||+++.+-...-.+|
T Consensus 169 ----~~~~i~~~~~d~~~G~~~~~~~~~~~~~-----~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 169 ----LSYSVDAFDYDLQTGQISNRRSVYKLEK-----EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp ----GGTEEEEEEECTTTCCEEEEEEEEECCG-----GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred ----CCCcEEEEeccCCCCcccCcEEEEECCC-----CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 2456888875 4554421 111211 00011233432 6789988655578999999976654432333
Q ss_pred CccCCCCCceEEEE-EeCCEEEEEcCCC
Q 013797 365 VRADFNRGWGIAFK-SLGNELLVIGASS 391 (436)
Q Consensus 365 ~~~~~~~~~~~~~~-~~~~~l~v~GG~~ 391 (436)
.. .-.++++. .-++.|||.....
T Consensus 240 ~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 240 VD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp SS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred CC----CceEEEEeCCCCCEEEEEcCCc
Confidence 21 11223322 1235899987654
No 82
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.26 E-value=0.72 Score=42.70 Aligned_cols=186 Identities=9% Similarity=-0.034 Sum_probs=101.8
Q ss_pred CeEEEeccCCCeEEEEecCC----CCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeC
Q 013797 142 PSVFMLASGDSSWWAFDRHF----QTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKG 215 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~----~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l 215 (436)
..+|+.-.....++.+|+.. ..-..+.. ....... .++. .++.||+... ....+.++++....-+.+
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~~p~---glavd~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~ 114 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--RDIQAPD---GLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTL 114 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEEC--SSCSCCC---EEEEETTTTEEEEEET--TTTEEEEEETTSSSEEEE
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEe--CCCCCcC---EEEEeecCCeEEEEEC--CCCEEEEEeCCCCceEEE
Confidence 34555444456788888765 22122111 1101111 1333 4789998742 346789999876544333
Q ss_pred C--CCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce-eEEEE--CCEEEEEec
Q 013797 216 P--SMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC-SGCYM--DNKFYVIGG 288 (436)
Q Consensus 216 ~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~--~g~iyv~gG 288 (436)
. .+..| ..+++ .++.||+..... ...++++++....=+.+... ....+ +.++- +++||+...
T Consensus 115 ~~~~~~~P---~~iavdp~~g~ly~~d~~~------~~~I~~~~~dG~~~~~~~~~--~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 115 FRENGSKP---RAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EECTTCCE---EEEEEETTTTEEEEEECSS------SCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCc---ceEEeCCCCCEEEEEccCC------CCeEEEEcCCCCCeEEEEEC--CCCCceEEEEeccCCEEEEEEC
Confidence 2 22222 23334 378999985311 24689999865443333111 11222 33333 689999864
Q ss_pred cCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 289 RNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 289 ~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
..+.|+++|+....-+.+..... ......++++.++.||+.....+.|.++|+.+++
T Consensus 184 ------~~~~I~~~d~dg~~~~~~~~~~~-----~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 184 ------KLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp ------TTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ------CCCeEEEEecCCCceEEEeecCC-----ccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 34679999987543333322110 1112346777889999998778899999986653
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.26 E-value=0.9 Score=43.99 Aligned_cols=174 Identities=10% Similarity=0.073 Sum_probs=89.6
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
++.+++.|+. ...+.+||..+.+-...-... ...-.+++.. ++..++.|+.++ .+.+||..+++-...
T Consensus 279 ~~~~l~~~~~--d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg~~dg-------~i~vwd~~~~~~~~~- 347 (464)
T 3v7d_B 279 HGNIVVSGSY--DNTLIVWDVAQMKCLYILSGH-TDRIYSTIYDHERKRCISASMDT-------TIRIWDLENGELMYT- 347 (464)
T ss_dssp ETTEEEEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEEEEETTTTEEEEEETTS-------CEEEEETTTTEEEEE-
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEEecCC-CCCEEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCcEEEE-
Confidence 3444445543 346899999877643221111 1111222222 455666665442 488899987653221
Q ss_pred CCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCC
Q 013797 266 GMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSN 345 (436)
Q Consensus 266 ~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~ 345 (436)
+.........+..++...+.|+.+ ..+.+||+.+..-...... ...........++.+++.|+ .+
T Consensus 348 -~~~h~~~v~~~~~~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 348 -LQGHTALVGLLRLSDKFLVSAAAD------GSIRGWDANDYSRKFSYHH-------TNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp -ECCCSSCEEEEEECSSEEEEEETT------SEEEEEETTTCCEEEEEEC-------TTCCCEEEEEECSSEEEEEE-TT
T ss_pred -EeCCCCcEEEEEEcCCEEEEEeCC------CcEEEEECCCCceeeeecC-------CCCccEEEEEeCCCEEEEec-CC
Confidence 111122233445567777777643 4688999987642221111 11122223455777777766 78
Q ss_pred eEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 346 ELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 346 ~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
.|.+||.++++-......+. ...-..+...++.+++.++.+
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~-----~~~v~~v~~~~~~l~~~~~~~ 453 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKD-----ADQIWSVNFKGKTLVAAVEKD 453 (464)
T ss_dssp EEEEEETTTCCEEESCTTTT-----CSEEEEEEEETTEEEEEEEET
T ss_pred eEEEEECCCCcEEehhhccC-----CCcEEEEEecCCEEEEEEEeC
Confidence 99999999876554211111 111123334566666665554
No 84
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.23 E-value=0.051 Score=51.46 Aligned_cols=181 Identities=9% Similarity=0.004 Sum_probs=91.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCccc-EEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLF-ASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++..++.|+. ...+.+||..+++-...- ....... +++.. +..+++.++.++ .+.+||..+.+-..
T Consensus 150 dg~~l~sgs~--dg~v~iwd~~~~~~~~~~--~~h~~~v~~v~~s~~~~~~~~s~~~dg-------~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 150 DGTQAVSGGK--DFSVKVWDLSQKAVLKSY--NAHSSEVNCVAACPGKDTIFLSCGEDG-------RILLWDTRKPKPAT 218 (357)
T ss_dssp SSSEEEEEET--TSCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTCSSCEEEEETTS-------CEEECCTTSSSCBC
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEEE--cCCCCCEEEEEEccCCCceeeeeccCC-------ceEEEECCCCceee
Confidence 5556666653 346889999887643221 1111111 22222 234666666442 47888988765332
Q ss_pred CCCCccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEE-EcCCCCCCCCCCCCCCCCEEEEE-CC-EE
Q 013797 264 LPGMRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY-HIPDILKDFPAETGKSPPLIAVV-NN-EL 337 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~-~v~~~~~~~~~~~~r~~~~~~~~-~g-~l 337 (436)
.-..........++.+ ++.+++.|+.+ ..+..||+.+.+=. .+.... .....++.. ++ ++
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~--------~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHS--------QNITGLAYSYHSSPF 284 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCS--------SCEEEEEECSSSSCC
T ss_pred eeeeccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccc--------eeEEEEEEcCCCCCE
Confidence 2111111112222333 35677777643 34788998765421 111110 011122221 34 56
Q ss_pred EEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 338 YSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 338 yv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
++.|+..+.|.+||.++.+-... +. ....-.++++...++.+++.||.+ ..+.+|
T Consensus 285 lasgs~D~~i~iwd~~~~~~~~~--~~---H~~~V~~vafsP~d~~~l~s~s~D----g~v~iW 339 (357)
T 4g56_B 285 LASISEDCTVAVLDADFSEVFRD--LS---HRDFVTGVAWSPLDHSKFTTVGWD----HKVLHH 339 (357)
T ss_dssp EEEEETTSCEEEECTTSCEEEEE--CC---CSSCEEEEEECSSSTTEEEEEETT----SCEEEE
T ss_pred EEEEeCCCEEEEEECCCCcEeEE--CC---CCCCEEEEEEeCCCCCEEEEEcCC----CeEEEE
Confidence 66677778899999988754332 11 111112222211367788888877 356677
No 85
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.22 E-value=0.15 Score=45.54 Aligned_cols=187 Identities=8% Similarity=-0.064 Sum_probs=96.7
Q ss_pred CCeEEEEecCC-CCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec--CCCeEEEEECCCCCEEeCCCCCCCCcccEE
Q 013797 151 DSSWWAFDRHF-QTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI--EGGVIWRYELETNNWFKGPSMRRPRCLFAS 227 (436)
Q Consensus 151 ~~~~~~~dp~~-~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~ 227 (436)
...++.+|..+ .+...+........... ....-++..+++++.. ....++.++..+++-+.+..... ...+
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 134 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFATICNND---HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---SYWH 134 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCCCBCSC---CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---EEEE
T ss_pred CCeEEEEeCCCCCCceEeccccccccccc---eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---ccce
Confidence 45788999988 77666543332111111 1233355555554422 34689999998887666544321 1222
Q ss_pred EEe-CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE-ECCE-EEEEeccCCCCCcCCEEEEEE
Q 013797 228 ATC-GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY-MDNK-FYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 228 ~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-iyv~gG~~~~~~~~~~v~~yD 303 (436)
+.. ++ .+++.++.++ ...++.+|..+.....+...+... ...+. -+++ |++.+..+ ....++.++
T Consensus 135 ~~spdg~~l~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~----~~~~i~~~~ 203 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQ-----VFDIYSMDIDSGVETRLTHGEGRN--DGPDYSPDGRWIYFNSSRT----GQMQIWRVR 203 (297)
T ss_dssp EECTTSSEEEEEEEETT-----EEEEEEEETTTCCEEECCCSSSCE--EEEEECTTSSEEEEEECTT----SSCEEEEEE
T ss_pred EECCCCCEEEEEECCCC-----ceEEEEEECCCCcceEcccCCCcc--ccceECCCCCEEEEEecCC----CCccEEEEC
Confidence 222 34 4554544332 235777778877776664332111 11222 2555 44443323 245678888
Q ss_pred CCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecC-----------CCeEEEEECCCCcEEEccc
Q 013797 304 EYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETS-----------SNELRVYLKDSNSWKNLGL 362 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~-----------~~~i~~yd~~~~~W~~v~~ 362 (436)
...+....+..... ....+.. -+++.+++++. ...|++||.++++...+..
T Consensus 204 ~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 204 VDGSSVERITDSAY--------GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp TTSSCEEECCCCSE--------EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CCCCCcEEEecCCc--------ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 87777766654321 0011111 14544333322 1469999999887766643
No 86
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.22 E-value=1.2 Score=46.13 Aligned_cols=119 Identities=17% Similarity=0.166 Sum_probs=74.1
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCC--------CcccEEEEeCCEEEEEcCcCCCCCCccceEE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRP--------RCLFASATCGTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
-+..++.||+... ...++.+|..|++ |+.-...+.. ....+.++.+++||+... ...+.
T Consensus 73 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--------dg~l~ 141 (677)
T 1kb0_A 73 PVVVDGIMYVSAS---WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--------DGRLI 141 (677)
T ss_dssp CEEETTEEEEECG---GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------TSEEE
T ss_pred CEEECCEEEEECC---CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------CCEEE
Confidence 3567999999864 3579999999887 8875543211 112234557889988743 13588
Q ss_pred EEeCCCCC--eEeCCC--Ccc-CCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc--EEEcC
Q 013797 253 RYNPETKS--WDSLPG--MRQ-RRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIP 313 (436)
Q Consensus 253 ~yd~~t~~--W~~~~~--~p~-~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~ 313 (436)
.+|..+++ |+.-.. .+. .....+.++.++++|+..+....+ ....+.+||..+++ |+.-.
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~-~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG-VRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEES
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC-CCCEEEEEECCCCcEEEEecc
Confidence 99998886 875322 111 112234456789988864322111 34678999998874 87643
No 87
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.20 E-value=0.89 Score=46.50 Aligned_cols=240 Identities=10% Similarity=-0.021 Sum_probs=114.0
Q ss_pred CCeEEEEecC--C-CCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEcee-------cCCCeEEEEECCC------CCEE
Q 013797 151 DSSWWAFDRH--F-QTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNE-------IEGGVIWRYELET------NNWF 213 (436)
Q Consensus 151 ~~~~~~~dp~--~-~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~-------~~~~~v~~ydp~t------~~W~ 213 (436)
...++.+|.. . +.-.++...+.............+-+| .|+..... .....++++|..+ ++-+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 4567777776 3 555555543311000000001223344 45444322 1125899999988 6666
Q ss_pred eCC-CCCCCCcccEEEEeCCE-EEEEcCcCCCCCC-ccceEEEEeCC-CCCeEeCCCCccC-Ccc-eeEEE-ECCEEEEE
Q 013797 214 KGP-SMRRPRCLFASATCGTF-AFVAGGHGMDGSG-VLNSAERYNPE-TKSWDSLPGMRQR-RKL-CSGCY-MDNKFYVI 286 (436)
Q Consensus 214 ~l~-~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~-~~~~~~~yd~~-t~~W~~~~~~p~~-r~~-~~~~~-~~g~iyv~ 286 (436)
.+. .-.. ........-+++ |++.. ....... ....++++|.. ++++.....+... ... ...+. -+|++|+.
T Consensus 181 ~l~~~~~~-~~~~~~~SpDG~~la~~~-~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 181 ELSDDAHR-FVTGPRLSPDGRQAVWLA-WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp ESSCSCSS-EECCCEECTTSSEEEEEE-ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred EEEecCCC-cccCceECCCCCEEEEEE-CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence 664 2211 111111112454 44443 2221100 12579999998 5633322122111 111 12222 27788777
Q ss_pred eccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCC-CCEEEEE-CCEEEEEecC-CCeEEEEECCCCcEEEcccC
Q 013797 287 GGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKS-PPLIAVV-NNELYSLETS-SNELRVYLKDSNSWKNLGLV 363 (436)
Q Consensus 287 gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~-~~~~~~~-~g~lyv~gg~-~~~i~~yd~~~~~W~~v~~~ 363 (436)
+..++ ...++.+|+.++++..+.........+.... ...++.. ++++++.+.. ...|+.+|..+++.+.+..
T Consensus 259 ~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~- 333 (662)
T 3azo_A 259 TDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAG- 333 (662)
T ss_dssp ECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCS-
T ss_pred ECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecC-
Confidence 65432 3478999998999988865432211111100 1123333 6777777654 2356777988887776632
Q ss_pred CCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 364 PVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 364 p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
+. .....+ ....++.++++.+... ....+|.++.
T Consensus 334 ~~----~~~~~~-~s~~~~~~~~~~~~~~---~~~~i~~~d~ 367 (662)
T 3azo_A 334 PW----TEWAAT-LTVSGTRAVGVAASPR---TAYEVVELDT 367 (662)
T ss_dssp SC----CEEEEE-EEEETTEEEEEEEETT---EEEEEEEEET
T ss_pred CC----CeEEEE-EecCCCEEEEEEcCCC---CCCEEEEEEC
Confidence 11 111112 0245666666654432 2345665554
No 88
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.18 E-value=0.41 Score=43.51 Aligned_cols=193 Identities=11% Similarity=-0.031 Sum_probs=99.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~ 262 (436)
.+.+++.|. ....+.++|+.|++ |+.-..-. .......+.-++.+++.+ ...+..||+ +++ |+
T Consensus 4 ~~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~---------~~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 4 PQHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY---------SKGAKMITR-DGRELWN 70 (276)
T ss_dssp CCEEEEECT--TCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC---------BSEEEEECT-TSCEEEE
T ss_pred CCcEEEeeC--CCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC---------CCCEEEECC-CCCEEEE
Confidence 356666653 34678899998887 76543211 112222333477888832 134888999 554 76
Q ss_pred eCCCCccCCccee-EEEECCEEEEEeccCCCCCcCCEEEEEECCCC-cEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 013797 263 SLPGMRQRRKLCS-GCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG-TWYHIPDILKDFPAETGKSPPLIAVVNNELYSL 340 (436)
Q Consensus 263 ~~~~~p~~r~~~~-~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~-~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~ 340 (436)
.-.+ .....++ ....+|++++.... ....++.+|+..+ .|+.-.... ...+...........+|.+++.
T Consensus 71 ~~~~--~~~~~~~~~~~~dG~~lv~~~~-----~~~~v~~vd~~Gk~l~~~~~~~~--~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 71 IAAP--AGCEMQTARILPDGNALVAWCG-----HPSTILEVNMKGEVLSKTEFETG--IERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EECC--TTCEEEEEEECTTSCEEEEEES-----TTEEEEEECTTSCEEEEEEECCS--CSSGGGSCSCCEECTTSCEEEE
T ss_pred EcCC--CCccccccEECCCCCEEEEecC-----CCCEEEEEeCCCCEEEEEeccCC--CCcccccccCceECCCCCEEEE
Confidence 4432 1111122 23347777776542 1346788887544 344321110 0000111111223446777777
Q ss_pred ecCCCeEEEEECCCC-cEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEe
Q 013797 341 ETSSNELRVYLKDSN-SWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLL 417 (436)
Q Consensus 341 gg~~~~i~~yd~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l 417 (436)
....+.|.+||++.+ .|+.-. +. ..+++. ...++.+++.+.... . ++.++|++ ++..|+.-
T Consensus 142 ~~~~~~v~~~d~~G~~~w~~~~--~~-----~~~~~~-~~~~g~~~v~~~~~~----~--v~~~d~~t--G~~~w~~~ 203 (276)
T 3no2_A 142 LFATSEVREIAPNGQLLNSVKL--SG-----TPFSSA-FLDNGDCLVACGDAH----C--FVQLNLES--NRIVRRVN 203 (276)
T ss_dssp ETTTTEEEEECTTSCEEEEEEC--SS-----CCCEEE-ECTTSCEEEECBTTS----E--EEEECTTT--CCEEEEEE
T ss_pred ecCCCEEEEECCCCCEEEEEEC--CC-----Ccccee-EcCCCCEEEEeCCCC----e--EEEEeCcC--CcEEEEec
Confidence 766788999999843 365432 11 112222 245678888765542 2 45556642 45567653
No 89
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.17 E-value=1.3 Score=44.83 Aligned_cols=119 Identities=12% Similarity=0.107 Sum_probs=73.0
Q ss_pred eEEeCCEEEEEceecCCCeEEEEEC-CCCC--EEeCCCCCCC--------CcccEEEEeCCEEEEEcCcCCCCCCccceE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYEL-ETNN--WFKGPSMRRP--------RCLFASATCGTFAFVAGGHGMDGSGVLNSA 251 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp-~t~~--W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 251 (436)
-+..++.||+.... ...++.+|. .|++ |+.-...... ....+.++.+++||+... ...+
T Consensus 58 P~v~~g~vyv~~~~--~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------dg~l 127 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF--PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--------NGHL 127 (571)
T ss_dssp CEEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------TSEE
T ss_pred cEEECCEEEEEeCC--CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC--------CCEE
Confidence 35679999997541 357999999 8886 8875432211 111234567899998743 1358
Q ss_pred EEEeCCCCC--eEe-CCCCccC-CcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEc
Q 013797 252 ERYNPETKS--WDS-LPGMRQR-RKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHI 312 (436)
Q Consensus 252 ~~yd~~t~~--W~~-~~~~p~~-r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v 312 (436)
..+|..+++ |+. +...+.. ....+.++.++++|+..+....+ ....+++||..++ .|+.-
T Consensus 128 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~-~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 128 LALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG-VRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT-CCCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC-CCCEEEEEECCCCcEEEEEc
Confidence 899998886 874 3321111 11223456799998764321111 2457899999877 58653
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.12 Score=54.31 Aligned_cols=222 Identities=9% Similarity=0.078 Sum_probs=110.2
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eC--CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AG--THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFA 226 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~--~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~ 226 (436)
....+..||....++..+..+..+.... .++.. .+ +..++.|+. ...+.+||..+++|..+..+........
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~h~~~V---~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~~~~~~~~~~~~h~~~V~ 103 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTGHEGPV---WRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVN 103 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECCCSSCE---EEEEECCTTSCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCCcEEEEecCCCCCccceeccCCcCce---EEEEecCCCCCCEEEEEeC--CCeEEEEECCCCcccccccccCCCCCeE
Confidence 3567788888766665544333222111 11222 22 555666653 3568899999988766654443333333
Q ss_pred EEEe--C--CEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE---------------CCEEEEEe
Q 013797 227 SATC--G--TFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM---------------DNKFYVIG 287 (436)
Q Consensus 227 ~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---------------~g~iyv~g 287 (436)
++.+ + +.+++.|+.++ .+.+||..++.-.....+.........+.. ++.+.+.|
T Consensus 104 ~v~~sp~~~~~~l~sgs~dg-------~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASSDG-------KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp EEEECCGGGCSEEEEEETTS-------EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred EEEECCCCCCCEEEEEeCCC-------cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 3333 2 56777776442 588888877632111000000111111111 35666777
Q ss_pred ccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEE--C---CEEEEEecCCCeEEEEECCCCc--EE
Q 013797 288 GRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVV--N---NELYSLETSSNELRVYLKDSNS--WK 358 (436)
Q Consensus 288 G~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~--~---g~lyv~gg~~~~i~~yd~~~~~--W~ 358 (436)
+.+ ..+..||..++ .+..+..+.. .......+.. + +.+++.|+..+.|.+||..+.+ +.
T Consensus 177 s~d------g~I~iwd~~~~~~~~~~~~~~~~------h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~ 244 (753)
T 3jro_A 177 GAD------NLVKIWKYNSDAQTYVLESTLEG------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK 244 (753)
T ss_dssp ETT------SCEEEEEEETTTTEEEEEEEECC------CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCB
T ss_pred ECC------CeEEEEeccCCcccceeeeeecC------CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcce
Confidence 643 34677877554 3444333221 1111112222 3 6888888888899999988753 11
Q ss_pred EcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 359 NLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 359 ~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
... ...........++++ ..++..++.|+.++ .+.+|
T Consensus 245 ~~~-~~~~~~~~~v~~l~~-spdg~~l~s~s~Dg----~I~vw 281 (753)
T 3jro_A 245 KTL-LKEEKFPDVLWRASW-SLSGNVLALSGGDN----KVTLW 281 (753)
T ss_dssp CCB-SSSSCCSSCCCCEEE-CTTTCCEEEECSSS----CEECC
T ss_pred eEE-eccCCCCCceEEEEE-cCCCCEEEEEcCCC----EEEEE
Confidence 110 010001111122332 34667777777663 45566
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.13 E-value=0.72 Score=41.90 Aligned_cols=199 Identities=9% Similarity=0.113 Sum_probs=94.5
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--C--CEEEEEcCcCCCCCCccceEEEEeCCCCC-eE
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--G--TFAFVAGGHGMDGSGVLNSAERYNPETKS-WD 262 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~ 262 (436)
+.+++.|+. ...+.+||..+++|..+..+........++.+ + +.+++.|+.+ ..+.+||..++. +.
T Consensus 67 g~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 67 GTILASCSY--DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-------GKVSVVEFKENGTTS 137 (297)
T ss_dssp CSEEEEEET--TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEBCSSSCBC
T ss_pred CCEEEEEcC--CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-------CcEEEEEecCCCcee
Confidence 455565553 45789999988877655433222222222333 1 4566666543 247778876552 21
Q ss_pred eCCCCccCCcceeEEEE---------------CCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCC
Q 013797 263 SLPGMRQRRKLCSGCYM---------------DNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGK 325 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~---------------~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r 325 (436)
.. .+.........+.. ++++++.|+.++ .+..||..++ .|..+..+.. ..
T Consensus 138 ~~-~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~------H~ 204 (297)
T 2pm7_B 138 PI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG------HS 204 (297)
T ss_dssp CE-EEECCSSCEEEEEECCCC------------CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECC------CS
T ss_pred ee-eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC------cEEEEEEcCCCceEEEEEEecC------CC
Confidence 10 00000000011111 245667776443 4667776543 3544433321 00
Q ss_pred CCCEEEEE--C---CEEEEEecCCCeEEEEECCCC--cEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcE
Q 013797 326 SPPLIAVV--N---NELYSLETSSNELRVYLKDSN--SWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESM 398 (436)
Q Consensus 326 ~~~~~~~~--~---g~lyv~gg~~~~i~~yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 398 (436)
.....+.. + +.+++.++..+.|.+||..+. .|.... +...........+++ ..++++++.|+.+ ..+
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~-~~~~~~~~~v~~~~~-s~~g~~las~~~D----~~v 278 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL-LKEEKFPDVLWRASW-SLSGNVLALSGGD----NKV 278 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE-SSSSCCSSCEEEEEE-CSSSCCEEEEETT----SCE
T ss_pred CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee-eecccCCCcEEEEEE-CCCCCEEEEEcCC----CcE
Confidence 11112222 2 367777777888999998763 465321 110001111122222 3456777777776 367
Q ss_pred EEEeecCCCCCCccCcEEeec
Q 013797 399 AIYTCCPSSDAGELQWRLLEC 419 (436)
Q Consensus 399 ~~y~~~p~~d~~~~~W~~l~~ 419 (436)
.+|.... ...|..+..
T Consensus 279 ~lw~~~~-----~g~w~~~~~ 294 (297)
T 2pm7_B 279 TLWKENL-----EGKWEPAGE 294 (297)
T ss_dssp EEEEECT-----TSCEEEC--
T ss_pred EEEEECC-----CCcEEeccc
Confidence 7774221 237887763
No 92
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.10 E-value=1 Score=43.02 Aligned_cols=202 Identities=12% Similarity=-0.009 Sum_probs=113.0
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCC--CCCCCcccE
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPS--MRRPRCLFA 226 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~--~p~~r~~~~ 226 (436)
...+..+|+.......+...... .. +++. .++.||+.. .....++++++.....+.+.. +..|. +.+
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~---~~---gl~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~~~~p~-gla 165 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLEN---AI---ALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTGLESPG-GLA 165 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSC---EE---EEEEETTTTEEEEEE--TTTTEEEEEETTSCCEEEEECSSCSCCC-CEE
T ss_pred CccceeeccCCCcEEEEecCCCc---cE---EEEEecCCCeEEEEe--CCCCcEEEEecCCCCcEEEEeCCCCCcc-EEE
Confidence 45678888877665544321111 11 1232 368899874 234689999998887655432 22221 222
Q ss_pred EEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC--CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEE
Q 013797 227 SATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL--PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAY 302 (436)
Q Consensus 227 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~y 302 (436)
+-..++.||+.-.. ...++++++....-+.+ ..+..| .+.++. ++.||+..-. ....|+++
T Consensus 166 vd~~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~-----~~~~I~r~ 230 (386)
T 3v65_B 166 VDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG-----NTPRIEAS 230 (386)
T ss_dssp EETTTTEEEEEETT-------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECS-----SSCEEEEE
T ss_pred EEeCCCeEEEEcCC-------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccC-----CCCEEEEE
Confidence 22247899998542 23688888875543332 112222 233343 6889998531 13578999
Q ss_pred ECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEe
Q 013797 303 DEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSL 380 (436)
Q Consensus 303 D~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~ 380 (436)
|+....-..+.... .....++++. +++||+.....+.|+++|++...=+.+.... ...-.+++ ..
T Consensus 231 ~~dG~~~~~~~~~~-------~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~----~~~P~gia--v~ 297 (386)
T 3v65_B 231 SMDGSGRRIIADTH-------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG----LPHPFAIT--VF 297 (386)
T ss_dssp ETTSCSCEEEECSS-------CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS----CSSEEEEE--EE
T ss_pred eCCCCCcEEEEECC-------CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC----CCCceEEE--EE
Confidence 98765433332111 1112245553 6899999987889999998754333332111 11223444 57
Q ss_pred CCEEEEEcC
Q 013797 381 GNELLVIGA 389 (436)
Q Consensus 381 ~~~l~v~GG 389 (436)
++.||+..-
T Consensus 298 ~~~ly~td~ 306 (386)
T 3v65_B 298 EDSLYWTDW 306 (386)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEeeC
Confidence 888998753
No 93
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.05 E-value=0.48 Score=43.82 Aligned_cols=213 Identities=13% Similarity=0.135 Sum_probs=104.3
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
....+..||..+.+-..... ....... ......++..++.|+. ...+.+||..+.+-...-... .....+++.
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~--~~~~~~~--~~~~spdg~~l~~g~~--dg~v~i~~~~~~~~~~~~~~~-~~~v~~~~~ 172 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSID--AGPVDAW--TLAFSPDSQYLATGTH--VGKVNIFGVESGKKEYSLDTR-GKFILSIAY 172 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEE--CCTTCCC--CEEECTTSSEEEEECT--TSEEEEEETTTCSEEEEEECS-SSCEEEEEE
T ss_pred CCCcEEEEECCCCCEEEEEe--CCCccEE--EEEECCCCCEEEEEcC--CCcEEEEEcCCCceeEEecCC-CceEEEEEE
Confidence 35677788887765432111 1110000 0122335555555542 356888888877532211111 111112222
Q ss_pred -eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 230 -CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 230 -~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
-+++.++.|+.++ .+.+||..+++-.. +..-..+ -.+.+. -++++++.|+.+ ..+.+||..+
T Consensus 173 spdg~~lasg~~dg-------~i~iwd~~~~~~~~~~~~h~~~--v~~l~~spd~~~l~s~s~d------g~i~iwd~~~ 237 (321)
T 3ow8_A 173 SPDGKYLASGAIDG-------IINIFDIATGKLLHTLEGHAMP--IRSLTFSPDSQLLVTASDD------GYIKIYDVQH 237 (321)
T ss_dssp CTTSSEEEEEETTS-------CEEEEETTTTEEEEEECCCSSC--CCEEEECTTSCEEEEECTT------SCEEEEETTT
T ss_pred CCCCCEEEEEcCCC-------eEEEEECCCCcEEEEEcccCCc--eeEEEEcCCCCEEEEEcCC------CeEEEEECCC
Confidence 2566666666542 47889998775322 2111111 111222 267777777643 3478999887
Q ss_pred CcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEE
Q 013797 307 GTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNEL 384 (436)
Q Consensus 307 ~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l 384 (436)
..-... +. ........+.. ++..++.++..+.|.+||..+.+-.. .+.. ......++++ ..+++.
T Consensus 238 ~~~~~~--~~------~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~~--h~~~v~~v~~-s~~g~~ 304 (321)
T 3ow8_A 238 ANLAGT--LS------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH--TFFD--HQDQVWGVKY-NGNGSK 304 (321)
T ss_dssp CCEEEE--EC------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECC--CSSCEEEEEE-CTTSSE
T ss_pred cceeEE--Ec------CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE--EEcC--CCCcEEEEEE-CCCCCE
Confidence 654321 11 00011111222 56777778778899999998764332 2211 0111122222 235566
Q ss_pred EEEcCCCCCCCCcEEEE
Q 013797 385 LVIGASSTSSHESMAIY 401 (436)
Q Consensus 385 ~v~GG~~~~~~~~~~~y 401 (436)
++.||.+ ..+.+|
T Consensus 305 l~s~~~d----~~i~vw 317 (321)
T 3ow8_A 305 IVSVGDD----QEIHIY 317 (321)
T ss_dssp EEEEETT----CCEEEE
T ss_pred EEEEeCC----CeEEEE
Confidence 6777766 356677
No 94
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.04 E-value=0.34 Score=46.78 Aligned_cols=183 Identities=11% Similarity=0.003 Sum_probs=99.7
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC 230 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~ 230 (436)
..++.+|..+++...+...+... . ....+-++ .|++.+.......++++|+.+++...+..... ......+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~--~---~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~ 274 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHN--G---APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS---NNTEPTW 274 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCE--E---EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS---CEEEEEE
T ss_pred cEEEEEECCCCcEEEeecCCCcc--c---CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC---cccceEE
Confidence 58899999888776654332210 0 01122244 45545444444689999999998877654331 1222222
Q ss_pred --CCE-EEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 231 --GTF-AFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 231 --~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
+++ |++.+..++ ...++++|..++.-+.+... .......+. -+|+..++++... ....+..+|+.+
T Consensus 275 spdg~~l~~~s~~~g-----~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~ 344 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAG-----RPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLAT 344 (415)
T ss_dssp CTTSSEEEEEECTTS-----SCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTT
T ss_pred CCCCCEEEEEECCCC-----CcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcC---CceEEEEEECCC
Confidence 454 444432221 34689999988775554321 111111222 2566555544321 135789999999
Q ss_pred CcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCC---eEEEEECCCCcEEEcc
Q 013797 307 GTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSN---ELRVYLKDSNSWKNLG 361 (436)
Q Consensus 307 ~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~---~i~~yd~~~~~W~~v~ 361 (436)
++...+.... ....++. -+|+.+++++..+ .|+.+|..++.-+.+.
T Consensus 345 ~~~~~l~~~~---------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 345 GGVQVLSSTF---------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp CCEEECCCSS---------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred CCEEEecCCC---------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 8887654321 1111222 2566555544323 7999999887776664
No 95
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.03 E-value=1.3 Score=46.75 Aligned_cols=173 Identities=9% Similarity=-0.012 Sum_probs=97.6
Q ss_pred CCEEEEEceecCCCeEEEEECCCC----C-EEeCC-CCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETN----N-WFKGP-SMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPET 258 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~----~-W~~l~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t 258 (436)
++.||+... ....++++++... . ...+. .+..|. ++++ .++.||+.-.. ...|+++++..
T Consensus 435 ~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~---GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG 502 (791)
T 3m0c_C 435 SNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPD---GLAVDWIHSNIYWTDSV-------LGTVSVADTKG 502 (791)
T ss_dssp TTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCC---EEEEETTTTEEEEEETT-------TTEEEEEETTS
T ss_pred CCeeEEeec--cceeEEEEeccCCCCCcceeEEEecCCCCcc---eeeeeecCCcEEEEecC-------CCeEEEEeCCC
Confidence 688998743 3357888887642 2 22222 222222 3333 47799998532 34689999986
Q ss_pred CCeEeCC--CCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-
Q 013797 259 KSWDSLP--GMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV- 333 (436)
Q Consensus 259 ~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~- 333 (436)
..-+.+. .+..++ +.++. ++.||+..-. ....|+++++....-..+..-. .....++++-
T Consensus 503 ~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g-----~~~~I~~~~~dG~~~~~lv~~~-------l~~P~GLavD~ 567 (791)
T 3m0c_C 503 VKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLNGVDIYSLVTEN-------IQWPNGITLDL 567 (791)
T ss_dssp SSEEEEEECTTCCEE---EEEEETTTTEEEEEECS-----SSCEEEEEETTSCCEEEEECSS-------CSCEEEEEEET
T ss_pred CeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC-----CCCeEEEEecCCCceEEEEeCC-------CCCceEEEEec
Confidence 6554442 222222 23332 5899998621 2357899998765444432211 0112245544
Q ss_pred -CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCC
Q 013797 334 -NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 334 -~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
+++||+.....+.|+++|+....=+.+..... ...+..+++..+++||+.-..
T Consensus 568 ~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~----~l~~P~glav~~~~lYwtD~~ 621 (791)
T 3m0c_C 568 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK----RLAHPFSLAVFEDKVFWTDII 621 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEECTT----TTSSEEEEEEETTEEEEEETT
T ss_pred CCCeEEEEeCCCCcEEEEecCCCceEEEecCCC----ccCCCCEEEEeCCEEEEEECC
Confidence 68999998878899999997654333321111 112334455788899988543
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.01 E-value=0.4 Score=45.74 Aligned_cols=179 Identities=8% Similarity=0.098 Sum_probs=93.1
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+++............. .+++ .-++.+++.|+. ...+.+||..+++-...-. .......+.
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v----~~v~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~--~~~~~v~~~ 182 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYV----ASVKWSHDGSFLSVGLG--NGLVDIYDVESQTKLRTMA--GHQARVGCL 182 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCE----EEEEECTTSSEEEEEET--TSCEEEEETTTCCEEEEEC--CCSSCEEEE
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCE----EEEEECCCCCEEEEECC--CCeEEEEECcCCeEEEEec--CCCCceEEE
Confidence 356788999988876654333211110 1122 225555566543 3478999998876433211 112222333
Q ss_pred EeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 229 TCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 229 ~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
.+++.+++.|+.+ ..+.+||..+..-... .+.........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 183 ~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~ 248 (401)
T 4aez_A 183 SWNRHVLSSGSRS-------GAIHHHDVRIANHQIG-TLQGHSSEVCGLAWRSDGLQLASGGND------NVVQIWDARS 248 (401)
T ss_dssp EEETTEEEEEETT-------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTC
T ss_pred EECCCEEEEEcCC-------CCEEEEecccCcceee-EEcCCCCCeeEEEEcCCCCEEEEEeCC------CeEEEccCCC
Confidence 4466666666644 3588899874331110 01111111122222 66677777743 3578999987
Q ss_pred CcEEE-cCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec--CCCeEEEEECCCCcEE
Q 013797 307 GTWYH-IPDILKDFPAETGKSPPLIAVV--NNELYSLET--SSNELRVYLKDSNSWK 358 (436)
Q Consensus 307 ~~W~~-v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg--~~~~i~~yd~~~~~W~ 358 (436)
.+-.. +.... .....++.. +..+++.|+ ..+.|.+||..+.+-.
T Consensus 249 ~~~~~~~~~~~--------~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 249 SIPKFTKTNHN--------AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SSEEEEECCCS--------SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCccEEecCCc--------ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 64322 21111 111223333 346777764 5789999999876543
No 97
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.01 E-value=0.29 Score=47.34 Aligned_cols=219 Identities=7% Similarity=-0.113 Sum_probs=110.6
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec-CCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI-EGGVIWRYELETNNWFKGPSMRRPRCLFASATC 230 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~-~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~ 230 (436)
..++.+|.....-..+...... .. ....+-++..+++++.. ....++++|+.+++...+...+. ...+.+..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~---v~--~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~s 231 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP---LM--SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR--HNGAPAFS 231 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC---EE--EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS--CEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEeCCCCc---ce--eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC--cccCEEEc
Confidence 5788899876543333211110 00 01122245444444432 23689999999998876654332 11222222
Q ss_pred -CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 231 -GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 231 -~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
++ .|++.+..++ ...++++|..+++...+..... ......+ +|+..++++... ....++.+|+.+
T Consensus 232 pdg~~la~~~~~~g-----~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~ 300 (415)
T 2hqs_A 232 PDGSKLAFALSKTG-----SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA---GRPQVYKVNING 300 (415)
T ss_dssp TTSSEEEEEECTTS-----SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTS
T ss_pred CCCCEEEEEEecCC-----CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC---CCcEEEEEECCC
Confidence 44 4554544332 3469999999988776643221 1112222 565444443211 234789999988
Q ss_pred CcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecC---CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCC
Q 013797 307 GTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETS---SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGN 382 (436)
Q Consensus 307 ~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~---~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 382 (436)
+.-..+.... .....++. -+|+.++++.. ...|+++|.++.+.+.+..-. ....+++ .-++
T Consensus 301 ~~~~~l~~~~--------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~------~~~~~~~-spdg 365 (415)
T 2hqs_A 301 GAPQRITWEG--------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF------LDETPSL-APNG 365 (415)
T ss_dssp SCCEECCCSS--------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS------SCEEEEE-CTTS
T ss_pred CCEEEEecCC--------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC------CcCCeEE-cCCC
Confidence 7755443221 01111111 25554444332 357999999998887654211 1222332 3456
Q ss_pred EEEEEcCCCCCCCCcEEEEeecCC
Q 013797 383 ELLVIGASSTSSHESMAIYTCCPS 406 (436)
Q Consensus 383 ~l~v~GG~~~~~~~~~~~y~~~p~ 406 (436)
+.+++++.+. ....+|.++.+
T Consensus 366 ~~l~~~s~~~---~~~~l~~~d~~ 386 (415)
T 2hqs_A 366 TMVIYSSSQG---MGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEEET---TEEEEEEEETT
T ss_pred CEEEEEEcCC---CccEEEEEECC
Confidence 6555555432 23356666643
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.93 Score=43.94 Aligned_cols=201 Identities=7% Similarity=-0.059 Sum_probs=97.9
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe--CCCCCCCCcc-cEEEE-eC---CEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK--GPSMRRPRCL-FASAT-CG---TFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~--l~~~p~~r~~-~~~~~-~~---~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
++..++.|+. ...+++++..+.+... +..+...... .+++. -+ +..++.|+.+ ..+.+||..+.
T Consensus 160 ~~~~l~~~~~--~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~i~vwd~~~~ 230 (450)
T 2vdu_B 160 DDTTVIIADK--FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EHIKISHYPQC 230 (450)
T ss_dssp TSSEEEEEET--TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SCEEEEEESCT
T ss_pred CCCEEEEEeC--CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------CcEEEEECCCC
Confidence 4545555542 4568899887665332 1111111111 12222 25 6677777644 24788898776
Q ss_pred CeEeC-CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCC-------CCCC-----------
Q 013797 260 SWDSL-PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDIL-------KDFP----------- 320 (436)
Q Consensus 260 ~W~~~-~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~-------~~~~----------- 320 (436)
+.... ..-........+.. ++++++.|+. -..+.+||+.+++-...-... ....
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDYLLLSAGG------DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STTEEEEEES------SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred ceeeeeecCCCCceEEEEEC-CCCEEEEEeC------CCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 53321 10011111111222 7777777773 346889999887643221110 0000
Q ss_pred CCCCCCCCEEEEE-CCEEEEEec-CCCeEEEEEC--CC-CcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCC-C-
Q 013797 321 AETGKSPPLIAVV-NNELYSLET-SSNELRVYLK--DS-NSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASST-S- 393 (436)
Q Consensus 321 ~~~~r~~~~~~~~-~g~lyv~gg-~~~~i~~yd~--~~-~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~- 393 (436)
.........++.. +++.+++++ ..+.|.+||. .+ ..++.+..++.. ..-..++...+.+++..+... .
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-----~~v~~~~~~~~~~~v~~~~~~~~~ 378 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-----YNVISLSAHNDEFQVTLDNKESSG 378 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-----SCEEEEEEETTEEEEEECCTTCCS
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-----CceEEEEecCCcEEEEEecccCCC
Confidence 0001111112222 344444443 6788999998 33 456666544421 111233355577777665543 2
Q ss_pred -CCCcEEEEeecCCCC
Q 013797 394 -SHESMAIYTCCPSSD 408 (436)
Q Consensus 394 -~~~~~~~y~~~p~~d 408 (436)
....+.+|.++.+.+
T Consensus 379 ~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 379 VQKNFAKFIEYNLNEN 394 (450)
T ss_dssp SCCCSEEEEEEETTTT
T ss_pred CCCcceEEEEEEcCCC
Confidence 245689998886543
No 99
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.98 E-value=0.43 Score=43.97 Aligned_cols=241 Identities=12% Similarity=0.068 Sum_probs=117.8
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceec--CCCeEEEEECCCCCEEe-CCCC
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEI--EGGVIWRYELETNNWFK-GPSM 218 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~--~~~~v~~ydp~t~~W~~-l~~~ 218 (436)
.+++.......++.||+.+++...+....... . .+++ ..++.+|+..... ....+++||+.+++... +...
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~---~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 131 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKAN--P---AAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL 131 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECSSSS--E---EEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC--c---ceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC
Confidence 35544444567899999988876543111111 1 1122 2367788764321 12579999999887653 2221
Q ss_pred CCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CC-EEEEEeccCCCCC
Q 013797 219 RRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DN-KFYVIGGRNEKDK 294 (436)
Q Consensus 219 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g-~iyv~gG~~~~~~ 294 (436)
........++.- ++.+|+....... ......++++|+.+++...+.. .........+ ++ .||+...
T Consensus 132 ~~~~~~~~i~~d~~g~l~v~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~dg~~l~v~~~------ 201 (333)
T 2dg1_A 132 STAYCIDDMVFDSKGGFYFTDFRGYS-TNPLGGVYYVSPDFRTVTPIIQ---NISVANGIALSTDEKVLWVTET------ 201 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEECCCBT-TBCCEEEEEECTTSCCEEEEEE---EESSEEEEEECTTSSEEEEEEG------
T ss_pred ccCCcccceEECCCCCEEEEeccccc-cCCCceEEEEeCCCCEEEEeec---CCCcccceEECCCCCEEEEEeC------
Confidence 111111222222 6778876532111 0123468899988777654421 1111122222 44 5787653
Q ss_pred cCCEEEEEECCCC--cEEEcC-----CCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCc
Q 013797 295 PLTCGEAYDEYAG--TWYHIP-----DILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVR 366 (436)
Q Consensus 295 ~~~~v~~yD~~~~--~W~~v~-----~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~ 366 (436)
....+.+||+.++ ....+. ... .......++.. +|.||+.....+.|.+||++...-..+. .+..
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~------~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~-~~~~ 274 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFT------GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL-IPGR 274 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECC------SSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE-CTTG
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecC------CCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE-cCCC
Confidence 2346889998542 332211 111 00011123332 5788888655578999999655444442 2211
Q ss_pred cCC--CCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCC
Q 013797 367 ADF--NRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPS 406 (436)
Q Consensus 367 ~~~--~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~ 406 (436)
... ....++++..-++.||+.+.... ......+|.+++.
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~g~-~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSNDIE-MGGGSMLYTVNGF 315 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEECGG-GTCCEEEEEEECS
T ss_pred ccccccCcceEEECCCCCEEEEEeCccC-CCCCceEEEEecc
Confidence 000 01223443222357777654321 1224457765543
No 100
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.98 E-value=0.99 Score=41.75 Aligned_cols=201 Identities=9% Similarity=-0.010 Sum_probs=109.2
Q ss_pred CCeEEEEecCCCCeEeCCC-CCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCC----CCEEe-CC-CCCCC
Q 013797 151 DSSWWAFDRHFQTRRKLPE-LPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELET----NNWFK-GP-SMRRP 221 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~-~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t----~~W~~-l~-~~p~~ 221 (436)
...+..+|+.+.....+.+ +..+ . +++. .++.||+... ....++++++.+ ..-.. ++ .+..|
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p----~---g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNV----V---ALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSE----E---EEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCC
T ss_pred CCeEEEEECCCcceEehhcCCCce----E---EEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 3567788888776554422 1111 1 1333 2678998853 346899999876 22222 21 12222
Q ss_pred CcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC--CCccCCcceeEEEE--CCEEEEEeccCCCCCc
Q 013797 222 RCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP--GMRQRRKLCSGCYM--DNKFYVIGGRNEKDKP 295 (436)
Q Consensus 222 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~ 295 (436)
..+++ .++.||+.-.. ...+.++|+....-+.+. .+..+ .+.++. ++.||+.... .
T Consensus 80 ---~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-----~ 141 (316)
T 1ijq_A 80 ---DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----T 141 (316)
T ss_dssp ---CEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----S
T ss_pred ---CEEEEeecCCeEEEEECC-------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-----C
Confidence 33444 47899998532 246888998765433331 22222 233443 7899998631 1
Q ss_pred CCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCc
Q 013797 296 LTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGW 373 (436)
Q Consensus 296 ~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~ 373 (436)
...|+++++....-..+.... .....++++. +++||+.....+.|+++|++...-+.+..... ....-.
T Consensus 142 ~~~I~~~~~dG~~~~~~~~~~-------~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~--~~~~P~ 212 (316)
T 1ijq_A 142 PAKIKKGGLNGVDIYSLVTEN-------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK--RLAHPF 212 (316)
T ss_dssp SCEEEEEETTSCCEEEEECSS-------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT--TTSSEE
T ss_pred CCeEEEEcCCCCCeEEEEECC-------CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC--ccCCcE
Confidence 257899998755433332111 1122345554 67999998878899999998644333322111 011223
Q ss_pred eEEEEEeCCEEEEEcC
Q 013797 374 GIAFKSLGNELLVIGA 389 (436)
Q Consensus 374 ~~~~~~~~~~l~v~GG 389 (436)
+++ ..++.||+.-.
T Consensus 213 gia--v~~~~ly~~d~ 226 (316)
T 1ijq_A 213 SLA--VFEDKVFWTDI 226 (316)
T ss_dssp EEE--EETTEEEEEET
T ss_pred EEE--EECCEEEEEEC
Confidence 444 46788888753
No 101
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.98 E-value=0.86 Score=41.23 Aligned_cols=223 Identities=12% Similarity=0.053 Sum_probs=113.0
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC--
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR-- 220 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~-- 220 (436)
+++.......++.||+.++ ...+.. +.... .+++ ..++.+|+... ....+++||+.+++.+.+.....
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~-~~~~~-----~~l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMH-PSHHQ-----NGHCLNKQGHLIACSH--GLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEES-SCSSE-----EEEEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECEETTE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEEC-CCCCc-----ceeeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeeccCCC
Confidence 4444344567889999887 544432 11111 1122 23677877642 23579999999998776532211
Q ss_pred --CCcccEEEEeCCEEEEE----cCcC------CCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEE
Q 013797 221 --PRCLFASATCGTFAFVA----GGHG------MDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVI 286 (436)
Q Consensus 221 --~r~~~~~~~~~~~iyv~----GG~~------~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~ 286 (436)
.+....+..-++.+|+. |... .........++.||+. ++.+.+.. .........+ ++++++.
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~---~~~~~~gi~~s~dg~~lv~ 188 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR---DRVKPNGLAFLPSGNLLVS 188 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC---CCSSEEEEEECTTSCEEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec---CCCCCccEEECCCCCEEEE
Confidence 11111222236788886 3311 0000012468899987 55544321 1111122333 5666644
Q ss_pred eccCCCCCcCCEEEEEECC-CCcE-E--EcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEcc
Q 013797 287 GGRNEKDKPLTCGEAYDEY-AGTW-Y--HIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 287 gG~~~~~~~~~~v~~yD~~-~~~W-~--~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~~W~~v~ 361 (436)
+. ....+++||+. +++. . .+-... .. ...+++. -+|+||+.. .+.|.+||++.+.-..+.
T Consensus 189 ~~------~~~~i~~~~~~~~g~~~~~~~~~~~~------~~-~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 189 DT------GDNATHRYCLNARGETEYQGVHFTVE------PG-KTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVL 253 (296)
T ss_dssp ET------TTTEEEEEEECSSSCEEEEEEEECCS------SS-CCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEE
T ss_pred eC------CCCeEEEEEECCCCcCcCCCeEeeCC------CC-CCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEE
Confidence 43 23578999986 4555 1 111111 11 1112333 367888887 578999999866555543
Q ss_pred cCCCccCCCCCceEEEEEeC-CEEEEEcCCCCCCCCcEEEEeecCCCC
Q 013797 362 LVPVRADFNRGWGIAFKSLG-NELLVIGASSTSSHESMAIYTCCPSSD 408 (436)
Q Consensus 362 ~~p~~~~~~~~~~~~~~~~~-~~l~v~GG~~~~~~~~~~~y~~~p~~d 408 (436)
.+.. ...+++..-+ +.||+.... .+|.+++++.
T Consensus 254 -~~~~-----~~~~~f~~~d~~~L~v~t~~--------~l~~~~~~~~ 287 (296)
T 3e5z_A 254 -TPQT-----TSNLCFGGPEGRTLYMTVST--------EFWSIETNVR 287 (296)
T ss_dssp -CSSC-----CCEEEEESTTSCEEEEEETT--------EEEEEECSCC
T ss_pred -CCCC-----ceeEEEECCCCCEEEEEcCC--------eEEEEEcccc
Confidence 2221 1223332122 357775432 2676676554
No 102
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.97 E-value=0.35 Score=44.23 Aligned_cols=214 Identities=12% Similarity=0.074 Sum_probs=105.7
Q ss_pred cCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEE
Q 013797 149 SGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFAS 227 (436)
Q Consensus 149 ~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~ 227 (436)
.....+..||..+.+......+....... ..+. ..++..++.|+. ...+.+||..+++....-... .....++
T Consensus 116 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~~~~-~~~i~~~ 189 (337)
T 1gxr_A 116 GEASTLSIWDLAAPTPRIKAELTSSAPAC---YALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGH-TDGASCI 189 (337)
T ss_dssp ESSSEEEEEECCCC--EEEEEEECSSSCE---EEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEE
T ss_pred cCCCcEEEEECCCCCcceeeecccCCCce---EEEEECCCCCEEEEEeC--CCcEEEEeCCCCceeeeeecc-cCceEEE
Confidence 34567888898877643322222111110 0112 224555555543 346899999887643321111 1111222
Q ss_pred EEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECC
Q 013797 228 ATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEY 305 (436)
Q Consensus 228 ~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~ 305 (436)
+.. ++..++.++.+ ..+.+||..+.+-...-.. ...-...+. -+++++++|+.+ ..+..||..
T Consensus 190 ~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~------~~i~~~~~~ 254 (337)
T 1gxr_A 190 DISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMES------SNVEVLHVN 254 (337)
T ss_dssp EECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETT------SCEEEEETT
T ss_pred EECCCCCEEEEEecC-------CcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCC------CcEEEEECC
Confidence 222 55566666533 3588999887653322111 111112222 256667777633 357899998
Q ss_pred CCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEE
Q 013797 306 AGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNEL 384 (436)
Q Consensus 306 ~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l 384 (436)
+..-..+.... . ....+... ++++++.++..+.+.+||..+++-....... .....+++ ..++++
T Consensus 255 ~~~~~~~~~~~------~--~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~-----~~v~~~~~-s~~~~~ 320 (337)
T 1gxr_A 255 KPDKYQLHLHE------S--CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES-----SSVLSCDI-SVDDKY 320 (337)
T ss_dssp SSCEEEECCCS------S--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-----SCEEEEEE-CTTSCE
T ss_pred CCCeEEEcCCc------c--ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC-----CcEEEEEE-CCCCCE
Confidence 77644333221 0 11112222 5677777777889999999887544321111 11112222 335666
Q ss_pred EEEcCCCCCCCCcEEEE
Q 013797 385 LVIGASSTSSHESMAIY 401 (436)
Q Consensus 385 ~v~GG~~~~~~~~~~~y 401 (436)
++.|+.+ ..+.+|
T Consensus 321 l~~~~~d----g~i~iw 333 (337)
T 1gxr_A 321 IVTGSGD----KKATVY 333 (337)
T ss_dssp EEEEETT----SCEEEE
T ss_pred EEEecCC----CeEEEE
Confidence 6777665 345566
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.90 E-value=0.44 Score=45.39 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=77.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-----CCCCCCCCcccEEEEe--CC-EEEEEcCcCCCCCCccceEEEEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-----GPSMRRPRCLFASATC--GT-FAFVAGGHGMDGSGVLNSAERYNPET 258 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-----l~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~t 258 (436)
++.+++.|+. ...+.+||..++.... +..+.........+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 93 ~~~~l~s~s~--dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-------~i~iwd~~~ 163 (402)
T 2aq5_A 93 NDNVIASGSE--DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-------VILVWDVGT 163 (402)
T ss_dssp CTTEEEEEET--TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-------CEEEEETTT
T ss_pred CCCEEEEEeC--CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-------EEEEEECCC
Confidence 5566666653 3578999988875421 1111111111222222 33 4666666442 488899988
Q ss_pred CCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcC-CCCCCCCCCCCCCCCEEE-EEC
Q 013797 259 KSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIP-DILKDFPAETGKSPPLIA-VVN 334 (436)
Q Consensus 259 ~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~-~~~~~~~~~~~r~~~~~~-~~~ 334 (436)
++....-...........+.+ ++.+++.|+.+ ..+.+||+.+++-...- ... .......++ .-+
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPH------EGTRPVHAVFVSE 231 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSS------CSSSCCEEEECST
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCC------CCCcceEEEEcCC
Confidence 765322100111111122222 66677777633 46899999887543221 111 111112222 236
Q ss_pred CEEEEEe---cCCCeEEEEECCCC
Q 013797 335 NELYSLE---TSSNELRVYLKDSN 355 (436)
Q Consensus 335 g~lyv~g---g~~~~i~~yd~~~~ 355 (436)
+++++.| +..+.|.+||..+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBC
T ss_pred CcEEEEeccCCCCceEEEEcCccc
Confidence 7888887 56778999999864
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.89 E-value=1 Score=41.97 Aligned_cols=180 Identities=6% Similarity=0.048 Sum_probs=89.5
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..++.|.....+..... ....+++ ..++..++.|+. ...+.+||..+..+..+..+.........+
T Consensus 36 ~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~s~--D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v 111 (345)
T 3fm0_A 36 GDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSPCGNYLASASF--DATTCIWKKNQDDFECVTTLEGHENEVKSV 111 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECTTSSEEEEEET--TSCEEEEEECCC-EEEEEEECCCSSCEEEE
T ss_pred CCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECCCCCEEEEEEC--CCcEEEEEccCCCeEEEEEccCCCCCceEE
Confidence 35567788887776643221111110 0001112 225555666653 345777887777665443333222222223
Q ss_pred Ee--CCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEE
Q 013797 229 TC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 229 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
.+ ++..++.|+.++ .+.++|..+.. +..+..+.........+.. ++.+++.|+.+ ..+..||
T Consensus 112 ~~sp~~~~l~s~s~D~-------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d------~~i~~w~ 178 (345)
T 3fm0_A 112 AWAPSGNLLATCSRDK-------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD------DTVKLYR 178 (345)
T ss_dssp EECTTSSEEEEEETTS-------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT------SCEEEEE
T ss_pred EEeCCCCEEEEEECCC-------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC------CcEEEEE
Confidence 33 566666666542 47788876543 3322111111111112222 56666777644 3478899
Q ss_pred CCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEEC
Q 013797 304 EYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLK 352 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~ 352 (436)
..++.|..+..+.. .......+.. +++.++.|+..+.|.+||.
T Consensus 179 ~~~~~~~~~~~~~~------h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 179 EEEDDWVCCATLEG------HESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EETTEEEEEEEECC------CSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ecCCCEEEEEEecC------CCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 88888865444321 0011111222 5677777777788888875
No 105
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.80 E-value=1.2 Score=41.24 Aligned_cols=221 Identities=10% Similarity=0.009 Sum_probs=110.1
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCC--CEEeCCCC------CCCCc
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETN--NWFKGPSM------RRPRC 223 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~--~W~~l~~~------p~~r~ 223 (436)
..++.+|+.+++........ ...... ..++..++.||+... ....+.+||+... .-..+... .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~-~~~~p~--gia~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN-LFYLPH--GLSIDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT-TCSSEE--EEEECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCC-ccCCce--EEEECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 36788888877654321100 000111 112233677888753 3467999998765 22222210 01111
Q ss_pred c-cEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC-------ccCCccee-EEEE-C-CEEEEEeccC
Q 013797 224 L-FASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM-------RQRRKLCS-GCYM-D-NKFYVIGGRN 290 (436)
Q Consensus 224 ~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------p~~r~~~~-~~~~-~-g~iyv~gG~~ 290 (436)
. ..+++. ++.+||..+.. ...+.+||+....-..+... +.....+. .++. + +.||+...
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-- 215 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-- 215 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--
T ss_pred CCcEEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--
Confidence 1 233333 68899997532 23588999654433333211 11111223 3333 4 89999875
Q ss_pred CCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEec-------CCCeEEEEECCCCcEEEc-cc
Q 013797 291 EKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLET-------SSNELRVYLKDSNSWKNL-GL 362 (436)
Q Consensus 291 ~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg-------~~~~i~~yd~~~~~W~~v-~~ 362 (436)
..+.|.+||+.+++....-..+. .......++...+.+|...| ....+.+||..+.+.... +.
T Consensus 216 ----~~~~I~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~ 286 (329)
T 3fvz_A 216 ----ENGRIQCFKTDTKEFVREIKHAS-----FGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP 286 (329)
T ss_dssp ----TTTEEEEEETTTCCEEEEECCTT-----TTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC
T ss_pred ----CCCEEEEEECCCCcEEEEEeccc-----cCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC
Confidence 34578999998776644322211 11111122223344444443 345899999888765543 11
Q ss_pred CCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 363 VPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 363 ~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
.+. ....-.++++ .-+|.|||....+ ..+.+|
T Consensus 287 ~~~--~~~~p~~ia~-~~dG~lyvad~~~----~~I~~~ 318 (329)
T 3fvz_A 287 VRK--HFDMPHDIVA-SEDGTVYIGDAHT----NTVWKF 318 (329)
T ss_dssp SSS--CCSSEEEEEE-CTTSEEEEEESSS----CCEEEE
T ss_pred CCC--ccCCeeEEEE-CCCCCEEEEECCC----CEEEEE
Confidence 111 1122233442 3456899987654 355666
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.80 E-value=0.25 Score=46.84 Aligned_cols=143 Identities=8% Similarity=0.070 Sum_probs=71.8
Q ss_pred EeCCEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 185 CAGTHLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 185 ~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
..++. ++.|+. ...+.+||..+.+-.. +.. .......++.. ++..++.|+.++ .+.+||..+.+-.
T Consensus 215 ~~~~~-~~~~~~--~g~i~~~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~ 282 (425)
T 1r5m_A 215 VDDDK-FVIPGP--KGAIFVYQITEKTPTGKLIG--HHGPISVLEFNDTNKLLLSASDDG-------TLRIWHGGNGNSQ 282 (425)
T ss_dssp EETTE-EEEECG--GGCEEEEETTCSSCSEEECC--CSSCEEEEEEETTTTEEEEEETTS-------CEEEECSSSBSCS
T ss_pred cCCCE-EEEEcC--CCeEEEEEcCCCceeeeecc--CCCceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCccc
Confidence 33555 444443 3468999998764211 111 11111222222 455666665432 4788888765422
Q ss_pred e-CCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 013797 263 S-LPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELY 338 (436)
Q Consensus 263 ~-~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~ly 338 (436)
. +... ...-...+.. ++ +++.++. ...+.+||+.+.+-....... ......+.. ++.++
T Consensus 283 ~~~~~~--~~~i~~~~~~~~~-~l~~~~~------d~~i~i~d~~~~~~~~~~~~~--------~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 283 NCFYGH--SQSIVSASWVGDD-KVISCSM------DGSVRLWSLKQNTLLALSIVD--------GVPIFAGRISQDGQKY 345 (425)
T ss_dssp EEECCC--SSCEEEEEEETTT-EEEEEET------TSEEEEEETTTTEEEEEEECT--------TCCEEEEEECTTSSEE
T ss_pred eEecCC--CccEEEEEECCCC-EEEEEeC------CCcEEEEECCCCcEeEecccC--------CccEEEEEEcCCCCEE
Confidence 1 1111 1111223333 45 5555653 346899999876533221111 011112222 56777
Q ss_pred EEecCCCeEEEEECCCCc
Q 013797 339 SLETSSNELRVYLKDSNS 356 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~ 356 (436)
+.++..+.|.+||..+..
T Consensus 346 ~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEETTSCEEEEECHHHH
T ss_pred EEEECCCeEEEEECCCCc
Confidence 777777899999987654
No 107
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.78 E-value=1.9 Score=43.56 Aligned_cols=212 Identities=13% Similarity=0.132 Sum_probs=111.0
Q ss_pred CeEEEeccCCCeEEEEec-CCCC--eEeCCCCCCCC----CccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--E
Q 013797 142 PSVFMLASGDSSWWAFDR-HFQT--RRKLPELPSDP----CFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--W 212 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp-~~~~--W~~l~~~~~~~----~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W 212 (436)
..+|+.......++++|. .+++ |+.-....... +........+..++.||+... ...++.+|..|++ |
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGHLLALDAKTGKINW 139 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC---CCEEEEEECCCCCEEE
Confidence 344544321457899998 7654 77643322110 000011124567899998742 3579999999986 8
Q ss_pred EeC-CCCCCC-CcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCcc------C------------
Q 013797 213 FKG-PSMRRP-RCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQ------R------------ 270 (436)
Q Consensus 213 ~~l-~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~------~------------ 270 (436)
+.- ...+.. ....+.++.++.+|+..+..... ....+..||..+++ |+.-...+. +
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~--~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG--VRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT--CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEECCEEEEEecCCccC--CCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 743 221111 11222345688888765422111 23468999999876 864321111 0
Q ss_pred ----------C---cc----eeEEEE--CCEEEEEeccC---------CCCCcCCEEEEEECCCC--cEEEcCCCCCCCC
Q 013797 271 ----------R---KL----CSGCYM--DNKFYVIGGRN---------EKDKPLTCGEAYDEYAG--TWYHIPDILKDFP 320 (436)
Q Consensus 271 ----------r---~~----~~~~~~--~g~iyv~gG~~---------~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~ 320 (436)
. .. ...++- .+.+|+-.|.. +...+...++++|+.++ .|+.-........
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0 00 112222 47888866532 11113457999999887 5875322110000
Q ss_pred CCCCCCCCEEEE--ECC---EEEEEecCCCeEEEEECCCCc--EEE
Q 013797 321 AETGKSPPLIAV--VNN---ELYSLETSSNELRVYLKDSNS--WKN 359 (436)
Q Consensus 321 ~~~~r~~~~~~~--~~g---~lyv~gg~~~~i~~yd~~~~~--W~~ 359 (436)
. .....+.++. .+| ++++++...+.++++|.++.+ |+.
T Consensus 298 ~-~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 298 F-AGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp C-CCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred c-ccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 0 0112233332 356 366666666789999988764 654
No 108
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.78 E-value=1.5 Score=42.18 Aligned_cols=201 Identities=7% Similarity=-0.073 Sum_probs=109.6
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCC-----EEeCC-CCCCCC
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNN-----WFKGP-SMRRPR 222 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~-----W~~l~-~~p~~r 222 (436)
...+..+|+....+..+.+.... . .+++. .++.||+..- ....++++++.... ...+. .+..
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~---~---~~l~~d~~~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~-- 160 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRN---V---VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQA-- 160 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSC---E---EEEEEETTTTEEEEEET--TTTEEEEEEC------CCCEEEECSSCSC--
T ss_pred cceeEEEccCCcceeEeccccCc---c---eEEeeeeccCceEEEec--CCCeEEEEEcccCCCCCcceEEEeCCCCC--
Confidence 46778888887766654321111 0 11222 3688998742 34578899886521 22222 1111
Q ss_pred cccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC--CCccCCcceeEEEE--CCEEEEEeccCCCCCcC
Q 013797 223 CLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP--GMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 223 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~ 296 (436)
-..+++ .++.||+.-.. ...++++|+....-+.+. .+..| .+.++. ++.||+..-. ..
T Consensus 161 -p~glavD~~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~-----~~ 224 (400)
T 3p5b_L 161 -PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TP 224 (400)
T ss_dssp -EEEEEEETTTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS-----SS
T ss_pred -cccEEEEecCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC-----CC
Confidence 123333 47899998542 346889998876554432 22222 123332 6899998521 12
Q ss_pred CEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCce
Q 013797 297 TCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWG 374 (436)
Q Consensus 297 ~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~ 374 (436)
..|+++++....=..+..-. .....++++. +++||+.....+.|+++|++...-+.+...+. ...+.
T Consensus 225 ~~I~~~~~dG~~~~~~~~~~-------l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~----~l~~P 293 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVTEN-------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK----RLAHP 293 (400)
T ss_dssp CCEEEEETTSCSCEEEECSS-------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS----TTSSE
T ss_pred CEEEEEeCCCCccEEEEECC-------CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC----CCCCC
Confidence 46889998754333321110 0122245554 67999998878899999998654444422111 11122
Q ss_pred EEEEEeCCEEEEEc
Q 013797 375 IAFKSLGNELLVIG 388 (436)
Q Consensus 375 ~~~~~~~~~l~v~G 388 (436)
..++..++.||+..
T Consensus 294 ~gl~v~~~~lywtd 307 (400)
T 3p5b_L 294 FSLAVFEDKVFWTD 307 (400)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEEeCCEEEEec
Confidence 33446888999885
No 109
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.70 E-value=1.5 Score=41.81 Aligned_cols=183 Identities=10% Similarity=-0.063 Sum_probs=101.8
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCC--C
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGP--S 217 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~--~ 217 (436)
..+|+.-.....++.+++.......+........ . .++. .++.||+... ....++++++....-+.+. .
T Consensus 128 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p--~---glavd~~~g~lY~~d~--~~~~I~~~~~dg~~~~~l~~~~ 200 (386)
T 3v65_B 128 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP--G---GLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRKVLLWQS 200 (386)
T ss_dssp TEEEEEETTTTEEEEEETTSCCEEEEECSSCSCC--C---CEEEETTTTEEEEEET--TTTEEEECBTTSCSCEEEECSS
T ss_pred CeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCc--c---EEEEEeCCCeEEEEcC--CCCeEEEEeCCCCceEEeecCC
Confidence 3444443345677788887665544322111111 1 1333 4789998743 2357888888655433221 2
Q ss_pred CCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce-eEEE--ECCEEEEEeccCCC
Q 013797 218 MRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC-SGCY--MDNKFYVIGGRNEK 292 (436)
Q Consensus 218 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~--~~g~iyv~gG~~~~ 292 (436)
+..| ..+++ .++.||+..-.. ...++++++....-+.+... ....+ +.++ .+++||+...
T Consensus 201 l~~P---~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~~~~~~~~--~~~~PnGlavd~~~~~lY~aD~---- 265 (386)
T 3v65_B 201 LEKP---RAIALHPMEGTIYWTDWGN------TPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDA---- 265 (386)
T ss_dssp CSCE---EEEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEEEECS--SCSCEEEEEEEGGGTEEEEEET----
T ss_pred CCCC---cEEEEEcCCCeEEEeccCC------CCEEEEEeCCCCCcEEEEEC--CCCCeeeEEEeCCCCEEEEEEC----
Confidence 2222 23333 368899884211 24689999875443332111 11122 2333 3789999864
Q ss_pred CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC
Q 013797 293 DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
..+.|+++|+....-..+.... .....++++.++.||+.....+.|.++|..++
T Consensus 266 --~~~~I~~~d~dG~~~~~~~~~~-------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 266 --KHHVIERANLDGSHRKAVISQG-------LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp --TTTEEEEECTTSCSCEEEECSS-------CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred --CCCEEEEEeCCCCeeEEEEECC-------CCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 3467999998754322222111 11234567789999999877889999996443
No 110
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.70 E-value=0.15 Score=47.94 Aligned_cols=221 Identities=8% Similarity=0.026 Sum_probs=96.7
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCC-EEeCCCCCCCCcccEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNN-WFKGPSMRRPRCLFAS 227 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~~p~~r~~~~~ 227 (436)
....+..||..++.|..+..+..+..... ++. ..++.+++.|+. ...+.+||..+++ |.....+.........
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~---~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 105 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVT---CVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQTLVLLRLNRAATF 105 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEE---EEEECTTTCCEEEEET--TSSEEEC------CCCCEEECCCCSSCEEE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEE---EEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceeeeeEecccCCceEE
Confidence 45567788888887776665554322111 122 224555566553 3468899988876 4333222222222222
Q ss_pred EEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeCCCCccCC-cceeEEEE--CCEEEEEeccCCCCCcCCEEEE
Q 013797 228 ATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSLPGMRQRR-KLCSGCYM--DNKFYVIGGRNEKDKPLTCGEA 301 (436)
Q Consensus 228 ~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~r-~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~ 301 (436)
+.+ ++..++.|+.++ .+.+||..+++ |..+..+..+. .....+.+ ++++.+.|+.+ ..+..
T Consensus 106 ~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~i 172 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSGAR-------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD------RKAYV 172 (377)
T ss_dssp EECCTTSSCCEEEESSS-------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS------SCEEE
T ss_pred EEECCCCCEEEEEecCC-------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC------CEEEE
Confidence 222 455666665432 37788887764 33332222211 11122222 56677777644 34778
Q ss_pred EECCCCcEEEcCCCC-CCCC------C-CCCCCC-CEEEEE--CCEEEEEecCCCeEEEEECCCCcE--EEcccCCCccC
Q 013797 302 YDEYAGTWYHIPDIL-KDFP------A-ETGKSP-PLIAVV--NNELYSLETSSNELRVYLKDSNSW--KNLGLVPVRAD 368 (436)
Q Consensus 302 yD~~~~~W~~v~~~~-~~~~------~-~~~r~~-~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W--~~v~~~p~~~~ 368 (436)
||+.+......+... .... . ...... ...+.. ++++++.++..+.|.+||..+.+- ..+..+...
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-- 250 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS-- 250 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS--
T ss_pred EEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC--
Confidence 887543321111000 0000 0 000011 111222 567777777788999999887643 222222211
Q ss_pred CCCCceEEEEEeCCEEEEEcCCC
Q 013797 369 FNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 369 ~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
......+++ ..++++++.|+.+
T Consensus 251 ~~~v~~~~~-s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 251 QLPLRSLLW-ANESAIVAAGYNY 272 (377)
T ss_dssp SSCEEEEEE-EETTEEEEEESSS
T ss_pred CCceEEEEE-cCCCCEEEEEcCC
Confidence 111122332 4567777776543
No 111
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.65 E-value=0.99 Score=41.65 Aligned_cols=179 Identities=13% Similarity=0.149 Sum_probs=91.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.+++.|+. ...+.+||..+++-.. +...+.. ..+++. -++..++.|+.+ ..+.+||..++.-...
T Consensus 91 ~~~~l~s~s~--D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 91 TLPIAASSSL--DAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYS 159 (321)
T ss_dssp SSSEEEEEET--TSEEEEEETTTTEEEEEEECCTTC--CCCEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEE
T ss_pred CCCEEEEEeC--CCcEEEEECCCCCEEEEEeCCCcc--EEEEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEE
Confidence 4445555542 3578899998876432 2111111 112222 255666666543 3578888877653221
Q ss_pred CCCccCCcceeEEE--ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCCCEEEEE-CCEEEEE
Q 013797 265 PGMRQRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSPPLIAVV-NNELYSL 340 (436)
Q Consensus 265 ~~~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~ 340 (436)
+.........+. -++++.+.|+.+ ..+..||+.+++-.. +.... . ....++.. ++++++.
T Consensus 160 --~~~~~~~v~~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~------~--~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 160 --LDTRGKFILSIAYSPDGKYLASGAID------GIINIFDIATGKLLHTLEGHA------M--PIRSLTFSPDSQLLVT 223 (321)
T ss_dssp --EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCS------S--CCCEEEECTTSCEEEE
T ss_pred --ecCCCceEEEEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEcccC------C--ceeEEEEcCCCCEEEE
Confidence 111111111222 267777777644 357899998775322 22111 0 11122222 6777888
Q ss_pred ecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 341 ETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 341 gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
|+..+.|.+||..+..-... +.. .......+++ ..++..++.|+.+. .+.+|
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~--~~~--h~~~v~~~~~-sp~~~~l~s~s~D~----~v~iw 275 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGT--LSG--HASWVLNVAF-CPDDTHFVSSSSDK----SVKVW 275 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEE--ECC--CSSCEEEEEE-CTTSSEEEEEETTS----CEEEE
T ss_pred EcCCCeEEEEECCCcceeEE--EcC--CCCceEEEEE-CCCCCEEEEEeCCC----cEEEE
Confidence 88788999999987654332 111 0011111221 23566777777663 56666
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.58 E-value=1.3 Score=40.19 Aligned_cols=188 Identities=6% Similarity=-0.007 Sum_probs=89.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe----CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC----GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++..++.|+. ...+.+||..+.+.+.+..+.........+.+ ++.+++.|+.+ ..+.++|..++.|.
T Consensus 20 ~g~~las~s~--D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------~~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 20 YGKRMATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVMIWKEENGRWS 90 (297)
T ss_dssp TSSEEEEEET--TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------TEEEEEEBSSSCBC
T ss_pred CCCEEEEEeC--CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-------CEEEEEEcCCCceE
Confidence 4555566653 34677888765433222222211111222222 25666666654 25888999888775
Q ss_pred eCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCCCc-EE--EcCCCCCCCCCCCCCCCCEEE----
Q 013797 263 SLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYAGT-WY--HIPDILKDFPAETGKSPPLIA---- 331 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W~--~v~~~~~~~~~~~~r~~~~~~---- 331 (436)
.+..+.........+.+ + +.+++.|+.+ ..+..||+.++. +. .+.... . ....+.
T Consensus 91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~~~~~~h~------~--~v~~~~~~p~ 156 (297)
T 2pm7_B 91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSPIIIDAHA------I--GVNSASWAPA 156 (297)
T ss_dssp CCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCCEEEECCS------S--CEEEEEECCC
T ss_pred EEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceeeeeeeccc------C--ccceEeecCC
Confidence 44322211111222222 1 5566666633 456778876542 21 010000 0 000000
Q ss_pred ----------EECCEEEEEecCCCeEEEEECCCC--cEEEcccCCCccCCCCCceEEEEEeC--CEEEEEcCCCCCCCCc
Q 013797 332 ----------VVNNELYSLETSSNELRVYLKDSN--SWKNLGLVPVRADFNRGWGIAFKSLG--NELLVIGASSTSSHES 397 (436)
Q Consensus 332 ----------~~~g~lyv~gg~~~~i~~yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~~--~~l~v~GG~~~~~~~~ 397 (436)
..++++++.|+..+.|.+||..+. .|..+..+.. ....-..+++...+ +.+++.|+.+ ..
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D----~~ 230 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQD----RT 230 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETT----SC
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECC----Cc
Confidence 012457777887888999988654 3555443321 11111222221111 4777777776 46
Q ss_pred EEEEee
Q 013797 398 MAIYTC 403 (436)
Q Consensus 398 ~~~y~~ 403 (436)
+.+|..
T Consensus 231 v~iWd~ 236 (297)
T 2pm7_B 231 CIIWTQ 236 (297)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777743
No 113
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.50 E-value=0.73 Score=43.82 Aligned_cols=149 Identities=10% Similarity=-0.043 Sum_probs=76.4
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
.++.+++.|+. ...+.+||..+++-...-.- ....-.+++.. ++.+++.|+.+ ..+.+||..+.+-..
T Consensus 107 ~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~- 175 (420)
T 3vl1_A 107 LQMRRFILGTT--EGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQD-------MQLKIWSVKDGSNPR- 175 (420)
T ss_dssp SSSCEEEEEET--TSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCCCE-
T ss_pred cCCCEEEEEEC--CCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCce-
Confidence 36666666653 34688999887765443211 11111222222 55566666543 258899988654211
Q ss_pred CCCccCCcc-eeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEE-----------
Q 013797 265 PGMRQRRKL-CSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIA----------- 331 (436)
Q Consensus 265 ~~~p~~r~~-~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~----------- 331 (436)
.+...... .+.+.. ++++++.|+.+ ..+..||+.+++-...-..... .......++
T Consensus 176 -~~~~h~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 176 -TLIGHRATVTDIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKEN----PHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp -EEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTB----TTCCEEEEEEEECCCSSCGG
T ss_pred -EEcCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCC----CCCCccEEEEecCCcceeee
Confidence 11111111 122222 56666666643 3478899887753222111100 000000011
Q ss_pred -----------EECCEEEEEecCCCeEEEEECCCCc
Q 013797 332 -----------VVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 332 -----------~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.-++++++.|+..+.|.+||..+.+
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred cccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 1257778888878899999998765
No 114
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.50 E-value=2.5 Score=42.97 Aligned_cols=212 Identities=12% Similarity=0.118 Sum_probs=109.6
Q ss_pred CeEEEeccCCCeEEEEec-CCCC--eEeCCCCCCCC----CccCCCeeeEE--eCCE----EEEEceecCCCeEEEEECC
Q 013797 142 PSVFMLASGDSSWWAFDR-HFQT--RRKLPELPSDP----CFKLGDKESLC--AGTH----LIVSGNEIEGGVIWRYELE 208 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp-~~~~--W~~l~~~~~~~----~~~~~~~~~~~--~~~~----iyv~GG~~~~~~v~~ydp~ 208 (436)
..+|+.......++++|. .+++ |+.-....... +........+. .++. ||+... ...++.+|..
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa~ 139 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALNAE 139 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEETT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEECC
Confidence 344544321457899999 7754 87644332210 00000112344 5777 887632 3579999999
Q ss_pred CCC--EEeC-CCCCCC-CcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCccC------------
Q 013797 209 TNN--WFKG-PSMRRP-RCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQR------------ 270 (436)
Q Consensus 209 t~~--W~~l-~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~------------ 270 (436)
|++ |+.- ...... ....+-++.+++||+..+....+ ....+..||.++++ |+.-...+..
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g--~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG--VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGT--CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccC--CCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 987 8753 221111 11223345688887754321111 23468999999886 8753221110
Q ss_pred ----------------C---c----ceeEEE--ECCEEEEEeccC---------CCCCcCCEEEEEECCCC--cEEEcCC
Q 013797 271 ----------------R---K----LCSGCY--MDNKFYVIGGRN---------EKDKPLTCGEAYDEYAG--TWYHIPD 314 (436)
Q Consensus 271 ----------------r---~----~~~~~~--~~g~iyv~gG~~---------~~~~~~~~v~~yD~~~~--~W~~v~~ 314 (436)
. . ....++ .++.+|+-.|.. +...+...++++|++++ .|+.-..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 0 0 001122 367788865532 11113568999999988 5865332
Q ss_pred CCCCCCCCCCCCCCEEEE---ECC---EEEEEecCCCeEEEEECCCCc--EEE
Q 013797 315 ILKDFPAETGKSPPLIAV---VNN---ELYSLETSSNELRVYLKDSNS--WKN 359 (436)
Q Consensus 315 ~~~~~~~~~~r~~~~~~~---~~g---~lyv~gg~~~~i~~yd~~~~~--W~~ 359 (436)
....... ..-..+.++. .+| .+++.+...+.++++|.++.+ |..
T Consensus 298 ~~d~wd~-d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 298 PHDEWDY-AGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp TTCSSCC-CCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCccccc-cCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 1100000 1112233333 246 566666667788889888764 554
No 115
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.50 E-value=0.56 Score=49.15 Aligned_cols=178 Identities=9% Similarity=0.071 Sum_probs=88.8
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
....+..||..+++....-...... .. ......++..++.|+. ...+.+||..+++....-.. ....-.+++.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~~--v~--~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~ 105 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTETP--VR--AGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEA-HPDYIRSIAV 105 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSC--EE--EEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEEC-CSSCEEEEEE
T ss_pred CCCEEEEEECCCCceEEEEecCCCc--EE--EEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEec-CCCCEEEEEE
Confidence 3567888998776543321111110 00 0112235555555553 45799999988875432111 1111112222
Q ss_pred e-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCc-ceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECC
Q 013797 230 C-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRK-LCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEY 305 (436)
Q Consensus 230 ~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~ 305 (436)
. ++..++.|+.+ ..+.+||..++. .....+..... -..++.. ++.+++.++.+ ..+.+||+.
T Consensus 106 s~~~~~l~~~~~d-------g~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~ 171 (814)
T 3mkq_A 106 HPTKPYVLSGSDD-------LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLG 171 (814)
T ss_dssp CSSSSEEEEEETT-------SEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETT------SEEEEEETT
T ss_pred eCCCCEEEEEcCC-------CEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECC
Confidence 2 45455555433 257888887652 21111111111 1222333 45677777633 468899986
Q ss_pred CCc--EEEcCCCCCCCCCCCCCCCCEEEEE---CCEEEEEecCCCeEEEEECCCCc
Q 013797 306 AGT--WYHIPDILKDFPAETGKSPPLIAVV---NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 306 ~~~--W~~v~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
+.. ....... ......++.. ++.+++.|+..+.|.+||..+.+
T Consensus 172 ~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 172 QSTPNFTLTTGQ--------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp CSSCSEEEECCC--------TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCcceeEEecCC--------CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 553 2211111 0111222322 67788888888899999998765
No 116
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.49 E-value=0.0033 Score=64.15 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=29.0
Q ss_pred CCCCCCChHHHHHHhhccCC-cccccccccccHhhhhh
Q 013797 88 YSFVPSLSDELEVLIVARVP-RAEYWKFYLLNKRFLSL 124 (436)
Q Consensus 88 ~~~~~~LPddl~~~ILarLP-~~~l~~~~~Vck~w~~l 124 (436)
...|..||||++.+||.+|| .++..+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35688999999999999999 99999999999999987
No 117
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.49 E-value=2.8 Score=43.42 Aligned_cols=118 Identities=15% Similarity=0.167 Sum_probs=73.1
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCC--------CcccEEEEeCCEEEEEcCcCCCCCCccceEE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRP--------RCLFASATCGTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
-+..++.||+... ...++.+|..|++ |+.-...+.. ....+.++.+++||+... ...+.
T Consensus 66 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------dg~l~ 134 (689)
T 1yiq_A 66 PIVVDGVMYTTGP---FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------DGRLE 134 (689)
T ss_dssp CEEETTEEEEECG---GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------TSEEE
T ss_pred CEEECCEEEEEcC---CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------CCEEE
Confidence 3567999999754 3469999999887 8875433211 111234557888888652 13588
Q ss_pred EEeCCCCC--eEeCCC-Ccc--CCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc--EEEc
Q 013797 253 RYNPETKS--WDSLPG-MRQ--RRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHI 312 (436)
Q Consensus 253 ~yd~~t~~--W~~~~~-~p~--~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v 312 (436)
.+|.+|++ |+.-.. -+. .....+.++.++++|+-.+....+ ....+.+||..+++ |+.-
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~-~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG-VRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC-CCCEEEEEECCCCcEEEEec
Confidence 89998886 875432 111 112233456799998853321111 34578999999885 8753
No 118
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.46 E-value=1.1 Score=40.74 Aligned_cols=179 Identities=12% Similarity=0.041 Sum_probs=90.1
Q ss_pred ccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeee-EEeCCEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCccc
Q 013797 148 ASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKES-LCAGTHLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLF 225 (436)
Q Consensus 148 ~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~-~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~ 225 (436)
......+..||..+.+-... +....... .++ ...++.+++.|+. ...+.+||..+++-.. +... ....
T Consensus 83 ~~~d~~i~vwd~~~~~~~~~--~~~~~~~v---~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~---~~~v 152 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLKT--LKGHSNYV---FCCNFNPQSNLIVSGSF--DESVRIWDVKTGKCLKTLPAH---SDPV 152 (312)
T ss_dssp EETTSEEEEEETTTCCEEEE--EECCSSCE---EEEEECSSSSEEEEEET--TSCEEEEETTTCCEEEEECCC---SSCE
T ss_pred ECCCCEEEEEECCCCcEEEE--EcCCCCCE---EEEEEcCCCCEEEEEeC--CCcEEEEECCCCEEEEEecCC---CCcE
Confidence 33456788888877654321 11111000 011 1224455555553 3468999998876432 2211 1112
Q ss_pred EEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCccCCcceeEEE--ECCEEEEEeccCCCCCcCCEEE
Q 013797 226 ASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMRQRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGE 300 (436)
Q Consensus 226 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~ 300 (436)
....+ ++.+++.|+.++ .+.+||..+.+-.. +...... ....+. -+++.++.++. -..+.
T Consensus 153 ~~~~~~~~~~~l~~~~~d~-------~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~------d~~i~ 217 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDG-------LCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATL------DNTLK 217 (312)
T ss_dssp EEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEET------TTEEE
T ss_pred EEEEEcCCCCEEEEEeCCC-------cEEEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcC------CCeEE
Confidence 22222 556666666542 48889998776432 1111111 111122 25666666653 34688
Q ss_pred EEECCCCcEEEc-CCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCCc
Q 013797 301 AYDEYAGTWYHI-PDILKDFPAETGKSPPLIA-VVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 301 ~yD~~~~~W~~v-~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.||..+.+-... ..... ......... ..++.+++.|+..+.|.+||..+++
T Consensus 218 iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 218 LWDYSKGKCLKTYTGHKN-----EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEETTTTEEEEEECSSCC-----SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EEECCCCcEEEEEEecCC-----ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 999987753322 11110 111111111 2356777788878899999998764
No 119
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.46 E-value=1.3 Score=40.95 Aligned_cols=223 Identities=9% Similarity=0.091 Sum_probs=100.0
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCC-----EEeCCCCCCCCc
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNN-----WFKGPSMRRPRC 223 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~-----W~~l~~~p~~r~ 223 (436)
....+..||..++....+..+... .+.....+++ ..++.+++.|+. ...+.+||..+.. +..+..+.....
T Consensus 32 ~D~~i~lw~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~las~s~--D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 108 (330)
T 2hes_X 32 TDRKIKLVSVKYDDFTLIDVLDET-AHKKAIRSVAWRPHTSLLAAGSF--DSTVSIWAKEESADRTFEMDLLAIIEGHEN 108 (330)
T ss_dssp SSSCEEEEECSSSCCEEEEEECTT-CCCSCEEEEEECTTSSEEEEEET--TSCEEEEEC-------CCCEEEEEEC----
T ss_pred CCCEEEEEEecCCCeEEEEEEecC-CccCCEEEEEECCCCCEEEEEeC--CCcEEEEEcccCcCccccceeEEEEcCCCC
Confidence 455677888776543322222111 0000101111 225556666653 3467778774321 222111111111
Q ss_pred ccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCC--CCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCC
Q 013797 224 LFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPET--KSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLT 297 (436)
Q Consensus 224 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~ 297 (436)
....+.+ ++..++.|+.++ .+.++|... ..++.+..+.........+.+ ++.+++.|+.+ .
T Consensus 109 ~V~~v~~sp~g~~las~s~D~-------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D------~ 175 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDK-------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD------D 175 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTS-------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT------S
T ss_pred cEEEEEECCCCCEEEEEeCCC-------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC------C
Confidence 1122222 456666666442 478888743 234333222111111122222 56677777644 3
Q ss_pred EEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C--CEEEEEecCCCeEEEEECCCC------cEEEcccCCCcc
Q 013797 298 CGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N--NELYSLETSSNELRVYLKDSN------SWKNLGLVPVRA 367 (436)
Q Consensus 298 ~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~--g~lyv~gg~~~~i~~yd~~~~------~W~~v~~~p~~~ 367 (436)
.+..||..++.|..+..+.. .......+.. + +..++.|+..+.|.+||..+. .|..+..++...
T Consensus 176 ~i~iW~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h 249 (330)
T 2hes_X 176 TVRIWKDYDDDWECVAVLNG------HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVH 249 (330)
T ss_dssp CEEEEEEETTEEEEEEEECC------CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCC
T ss_pred eEEEEECCCCCeeEEEEccC------CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccc
Confidence 46788887777766554431 0011111222 2 345666777778888887532 466554443211
Q ss_pred CCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 368 DFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
......++ ...+.+++.||.+ ..+.+|
T Consensus 250 -~~~v~~v~--~s~~~~l~s~~~d----g~v~iw 276 (330)
T 2hes_X 250 -KRQVYNVA--WGFNGLIASVGAD----GVLAVY 276 (330)
T ss_dssp -SSCEEEEE--ECTTSCEEEEETT----SCEEEE
T ss_pred -ccceEEEE--EcCCCEEEEEeCC----CEEEEE
Confidence 11112222 2344466667665 366777
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.43 E-value=0.092 Score=55.28 Aligned_cols=190 Identities=7% Similarity=-0.017 Sum_probs=98.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--C--CEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--G--TFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++..++.|+. ...+.+||..++++..+..+........++.+ + +..++.|+.++ .+.+||..++.|.
T Consensus 20 dg~~latg~~--dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-------~I~vwd~~~~~~~ 90 (753)
T 3jro_A 20 YGKRLATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-------KVLIWKEENGRWS 90 (753)
T ss_dssp SSCCEEEEET--TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-------CEEEEEEETTEEE
T ss_pred CCCeEEEEEC--CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-------eEEEEECCCCccc
Confidence 3444555543 34678888877777665544433333333333 2 56667776543 4788999888876
Q ss_pred eCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-----
Q 013797 263 SLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV----- 333 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~----- 333 (436)
.+..+.........+.+ + +.+++.|+.+ ..+.+||+.++.-.....+.. .......+...
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~-----~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA-----HAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEEC-----CSSCEEEEEECCCC--
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeec-----CCCceEEEEecCcccc
Confidence 55433322222223333 3 6677777643 467889987662111100000 00000111111
Q ss_pred ---------CCEEEEEecCCCeEEEEECCCC--cEEEcccCCCccCCCCCceEEEEEeC---CEEEEEcCCCCCCCCcEE
Q 013797 334 ---------NNELYSLETSSNELRVYLKDSN--SWKNLGLVPVRADFNRGWGIAFKSLG---NELLVIGASSTSSHESMA 399 (436)
Q Consensus 334 ---------~g~lyv~gg~~~~i~~yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~~---~~l~v~GG~~~~~~~~~~ 399 (436)
++.+++.|+..+.|.+||..+. .+..+..+.. .......+++ ..+ +.+++.|+.++ .+.
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~-sp~~~~~~~l~s~s~Dg----~I~ 232 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAW-SPTVLLRSYLASVSQDR----TCI 232 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC--CSSCEEEEEE-CCCCSSSEEEEEEESSS----CEE
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC--CCCcEEEEEe-ccCCCCCCEEEEEecCC----EEE
Confidence 3677777877888999998654 3444433221 1111112222 223 67788887763 566
Q ss_pred EEee
Q 013797 400 IYTC 403 (436)
Q Consensus 400 ~y~~ 403 (436)
+|..
T Consensus 233 iwd~ 236 (753)
T 3jro_A 233 IWTQ 236 (753)
T ss_dssp EEEE
T ss_pred EecC
Confidence 6643
No 121
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.39 E-value=0.2 Score=46.49 Aligned_cols=194 Identities=14% Similarity=0.099 Sum_probs=97.8
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEcee---------------cCCCeEEEEE
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNE---------------IEGGVIWRYE 206 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~---------------~~~~~v~~yd 206 (436)
.+++... ...+..||+.++....+...............++.. +|.||+.... .....+++||
T Consensus 93 ~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 QLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred cEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 3444422 234677887765444432211111111111112333 6789986421 1125799999
Q ss_pred CCCCCEEeCCC-CCCCCcccEEEEe-C-CEEEEEcCcCCCCCCccceEEEEeCCCC---CeEeCCCCccCCcceeEEEE-
Q 013797 207 LETNNWFKGPS-MRRPRCLFASATC-G-TFAFVAGGHGMDGSGVLNSAERYNPETK---SWDSLPGMRQRRKLCSGCYM- 279 (436)
Q Consensus 207 p~t~~W~~l~~-~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~r~~~~~~~~- 279 (436)
+.+++...+.. +..| ..++.- + ..+||.-.. ...+.+||+... +.+.+..++. +....+
T Consensus 172 ~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d 237 (322)
T 2fp8_A 172 PSTKETTLLLKELHVP---GGAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRN 237 (322)
T ss_dssp TTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEGG-------GTEEEEEESSSTTTTCEEEEEECSS----EEEEEEC
T ss_pred CCCCEEEEeccCCccC---cceEECCCCCEEEEEeCC-------CCeEEEEECCCCcCCccceEEeCCC----CCCeEEC
Confidence 98887654421 1111 223333 3 358887432 246889998753 3333222221 333333
Q ss_pred -CCEEEEEeccCCCC----CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCC
Q 013797 280 -DNKFYVIGGRNEKD----KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 280 -~g~iyv~gG~~~~~----~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~ 354 (436)
+|+||+........ .....+.+||+....-..+.... .. .......++..+++||+.+...+.|.+|+++.
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~-g~---~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP-PF---AGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT-TT---TTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC-CC---ccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 57888875421000 01346889998755444443211 10 01223345566899999977778999999864
Q ss_pred C
Q 013797 355 N 355 (436)
Q Consensus 355 ~ 355 (436)
+
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 3
No 122
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.36 E-value=0.43 Score=43.92 Aligned_cols=155 Identities=14% Similarity=0.050 Sum_probs=75.3
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeC-CEEEEEceecCCCeEEEEECCCCCEEeCCCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAG-THLIVSGNEIEGGVIWRYELETNNWFKGPSMRR 220 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~ 220 (436)
..+++.......++.+|+.+++....-+.+...... ......+ ..+|+.+. ....+++||+.+++-...-..+.
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~~~~~ 85 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG---TAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHANLSS 85 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC---EEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEESCC
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc---eeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEEEccc
Confidence 345555556788999999887764432222200111 1122333 46777653 34679999999887543222211
Q ss_pred -----CCcccEEEEe-CC-EEEEEcCc---CCCC-CCccceEEEEeCCCCCeEe-CCCCccCCcceeEEE-ECCEEEEEe
Q 013797 221 -----PRCLFASATC-GT-FAFVAGGH---GMDG-SGVLNSAERYNPETKSWDS-LPGMRQRRKLCSGCY-MDNKFYVIG 287 (436)
Q Consensus 221 -----~r~~~~~~~~-~~-~iyv~GG~---~~~~-~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~g~iyv~g 287 (436)
......++.. ++ .+|+.+.. .... ......+.+||+.+++-.. +.....+....+.+. -+|++|+.+
T Consensus 86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES
T ss_pred ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc
Confidence 0111222332 34 56665421 0000 0012478999988743211 111111222222222 366777743
Q ss_pred ccCCCCCcCCEEEEEECCCCcEE
Q 013797 288 GRNEKDKPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 288 G~~~~~~~~~~v~~yD~~~~~W~ 310 (436)
+ .+.++|+.+++-.
T Consensus 166 ~---------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 166 P---------DIYKMDVKTGKYT 179 (349)
T ss_dssp S---------SEEEECTTTCCEE
T ss_pred C---------cEEEEeCCCCcee
Confidence 2 2788888777543
No 123
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.36 E-value=1.9 Score=40.75 Aligned_cols=219 Identities=9% Similarity=-0.031 Sum_probs=104.6
Q ss_pred EeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCE-EeCCCCCCCCc
Q 013797 146 MLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNW-FKGPSMRRPRC 223 (436)
Q Consensus 146 ~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W-~~l~~~p~~r~ 223 (436)
+.......+..||..+..-..... .+.. ...++.. -++.+++.|+. ...+.+||..+.+- ..+.. ....
T Consensus 113 ~~~~~dg~i~iwd~~~~~~~~~~~--~h~~---~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~--h~~~ 183 (420)
T 3vl1_A 113 ILGTTEGDIKVLDSNFNLQREIDQ--AHVS---EITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSNPRTLIG--HRAT 183 (420)
T ss_dssp EEEETTSCEEEECTTSCEEEEETT--SSSS---CEEEEEECTTSSEEEEEET--TSEEEEEETTTCCCCEEEEC--CSSC
T ss_pred EEEECCCCEEEEeCCCcceeeecc--cccC---ccEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcCceEEcC--CCCc
Confidence 333345667888887665443211 1110 1011222 24555555543 35799999887642 11111 1111
Q ss_pred ccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCccCCcce-eEE----------------------E
Q 013797 224 LFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMRQRRKLC-SGC----------------------Y 278 (436)
Q Consensus 224 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~-~~~----------------------~ 278 (436)
-.+++.. ++..++.|+.++ .+.+||..+++-.. +.......... ..+ .
T Consensus 184 v~~~~~~~~~~~l~s~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG-------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS-------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred EEEEEEcCCCCEEEEEcCCC-------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 1122222 455556665442 47888988765322 11110011110 111 1
Q ss_pred ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCE-EEEEecCCCeEEEEECCCCc
Q 013797 279 MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNE-LYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 279 ~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~-lyv~gg~~~~i~~yd~~~~~ 356 (436)
-++++.+.|+.+ ..+..||+.+.+-....... .......++.. ++. +++.|+..+.|.+||..+..
T Consensus 257 ~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 257 TYGKYVIAGHVS------GVITVHNVFSKEQTIQLPSK------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp CTTEEEEEEETT------SCEEEEETTTCCEEEEECCT------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred CCCCEEEEEcCC------CeEEEEECCCCceeEEcccc------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 256777777643 34789999876532211111 00011112222 344 77778778899999998753
Q ss_pred E--EEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 357 W--KNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 357 W--~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
- ..+..-. .... ..+...++++++.|+.+ ..+.+|.
T Consensus 325 ~~~~~~~~~~-----~~~v-~~~~~~~~~~l~s~~~d----~~v~iw~ 362 (420)
T 3vl1_A 325 CPVGEFLINE-----GTPI-NNVYFAAGALFVSSGFD----TSIKLDI 362 (420)
T ss_dssp SCSEEEEEST-----TSCE-EEEEEETTEEEEEETTT----EEEEEEE
T ss_pred CchhhhhccC-----CCCc-eEEEeCCCCEEEEecCC----ccEEEEe
Confidence 2 2221100 1111 12234578888888776 3566664
No 124
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.34 E-value=1.8 Score=44.59 Aligned_cols=148 Identities=12% Similarity=-0.014 Sum_probs=78.7
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCC-CeEeCCCCccCCc----
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETK-SWDSLPGMRQRRK---- 272 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~---- 272 (436)
..++++|..+++-..+............+.+ +++..+++..+... ....+.++|+.++ ..+.+........
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ--NECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS--CEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC--CeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 5799999999887666432111112222222 55433333332211 2457899999988 6655421111110
Q ss_pred ceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCC--
Q 013797 273 LCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NN-ELYSLETSSN-- 345 (436)
Q Consensus 273 ~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg~~~-- 345 (436)
......- +|++++.+..++ ...++.+|...+....+.... .. ...++.. ++ .||+.+...+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~------~~--v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGE------WE--VTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSS------SC--EEEEEEECTTSSEEEEEESSSCTT
T ss_pred CCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCC------eE--EEeeeEEcCCCCEEEEEecCCCCc
Confidence 1112223 788666664432 456888887777777665322 11 1111222 34 5666654433
Q ss_pred --eEEEEECCCCcEEEcc
Q 013797 346 --ELRVYLKDSNSWKNLG 361 (436)
Q Consensus 346 --~i~~yd~~~~~W~~v~ 361 (436)
.|+.+|.++.+.+.+.
T Consensus 381 ~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 381 ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp CBEEEEEETTCCCCEESC
T ss_pred eEEEEEEEcCCCCceecc
Confidence 7899999887766664
No 125
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.31 E-value=0.24 Score=46.33 Aligned_cols=187 Identities=9% Similarity=0.158 Sum_probs=94.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCC-CCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRR-PRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++.+++.||. ...+.+||..+++|.....+.. .......+.+ ++..++.|+.++ .+.++|..++.+..
T Consensus 27 ~g~~las~~~--D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-------~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 27 AGTLLASCGG--DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-------TTCIWKKNQDDFEC 97 (345)
T ss_dssp TSSCEEEEET--TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-------CEEEEEECCC-EEE
T ss_pred CCCEEEEEcC--CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-------cEEEEEccCCCeEE
Confidence 4555566653 3457788888877653222111 1111222222 566666666543 36778877776654
Q ss_pred CCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCC-cEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 013797 264 LPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAG-TWYHIPDILKDFPAETGKSPPLIAVV--NNELY 338 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~-~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~ly 338 (436)
+..+.........+.+ ++++.+.|+.+ ..+..||+.++ .+..+..+.. .......+.. ++.++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNS------HTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECC------CCSCEEEEEECSSSSCE
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecC------cCCCeEEEEECCCCCEE
Confidence 3222211111122222 56777777644 34788887654 2332222210 0011111222 56777
Q ss_pred EEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 339 SLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
+.|+..+.|.+||..++.|..+..+..- ......+++ ..+++.++.|+.+. .+.+|
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~-sp~g~~l~s~s~D~----~v~iW 221 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGH--ESTVWSLAF-DPSGQRLASCSDDR----TVRIW 221 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCC--SSCEEEEEE-CTTSSEEEEEETTS----CEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCC--CCceEEEEE-CCCCCEEEEEeCCC----eEEEe
Confidence 7787788999999999888765443321 111112221 23456666666653 45555
No 126
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.28 E-value=0.053 Score=51.19 Aligned_cols=149 Identities=11% Similarity=0.115 Sum_probs=73.8
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~ 263 (436)
++.+++.|+. ...+.+||..++.|+.+..+........++.+ ++..++.|+.++ .+.+||..++. |..
T Consensus 22 ~g~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~-------~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 22 QRTEFVTTTA--TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR-------NAYVYEKRPDGTWKQ 92 (377)
T ss_dssp SSSEEECCCS--SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS-------SEEEC------CCCC
T ss_pred CCCEEEEecC--CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC-------eEEEEEcCCCCceee
Confidence 5555566643 34678888888888887776543333333333 456666665432 47888888776 433
Q ss_pred CCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCc-EEEcCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 013797 264 LPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGT-WYHIPDILKDFPAETGKSPPLIAVV--NNELY 338 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W~~v~~~~~~~~~~~~r~~~~~~~~--~g~ly 338 (436)
...+.........+.+ ++++++.|+.+ ..+..||..+++ |..+..+... .......+.. +++++
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRP-----LRSTILSLDWHPNNVLL 161 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSS-----CCSCEEEEEECTTSSEE
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecc-----cCCCeEEEEEcCCCCEE
Confidence 2222111111122222 56666666643 347788887764 3222222210 0111111222 56777
Q ss_pred EEecCCCeEEEEECCCC
Q 013797 339 SLETSSNELRVYLKDSN 355 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~ 355 (436)
+.++..+.|.+||..++
T Consensus 162 ~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEEESSSCEEEEEECCS
T ss_pred EEEeCCCEEEEEEEEec
Confidence 77777788999998643
No 127
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.23 E-value=2.2 Score=40.99 Aligned_cols=146 Identities=11% Similarity=0.021 Sum_probs=87.1
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCC--CCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGP--SMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.++.||+... ....++++++....-+.+. .+..|+ .+++ .++.||+.--.. ...++++++....=
T Consensus 169 ~~~~lY~~d~--~~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~------~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 169 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVDI 237 (400)
T ss_dssp TTTEEEEEET--TTTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS------SCCEEEEETTSCSC
T ss_pred cCCceEEEEC--CCCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC------CCEEEEEeCCCCcc
Confidence 3789998843 3357889998876654442 222232 3344 378999985211 23588888875432
Q ss_pred EeCCCCccCCcce-eEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 262 DSLPGMRQRRKLC-SGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 262 ~~~~~~p~~r~~~-~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
+.+.. .....+ +.++- +++||+... ..+.|+++|+....-..+..... ......++++.++.||
T Consensus 238 ~~~~~--~~l~~P~glavd~~~~~lY~aD~------~~~~I~~~d~dG~~~~~~~~~~~-----~l~~P~gl~v~~~~ly 304 (400)
T 3p5b_L 238 YSLVT--ENIQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFEDKVF 304 (400)
T ss_dssp EEEEC--SSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCCEEEEECSS-----TTSSEEEEEEETTEEE
T ss_pred EEEEE--CCCCceEEEEEEeCCCEEEEEEC------CCCEEEEEeCCCCccEEEEeCCC-----CCCCCEEEEEeCCEEE
Confidence 22211 111122 23333 689999864 35679999987654333322111 1112346778899999
Q ss_pred EEecCCCeEEEEECCCC
Q 013797 339 SLETSSNELRVYLKDSN 355 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~ 355 (436)
+.....+.|+++|+.++
T Consensus 305 wtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 305 WTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEESSSCSEEEEESSSC
T ss_pred EecCCCCeEEEEEcCCC
Confidence 99877788999996554
No 128
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.22 E-value=1.9 Score=39.88 Aligned_cols=181 Identities=10% Similarity=0.046 Sum_probs=90.4
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcc-cEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCL-FASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
.++.++ .|+ ....+.+||..+++-... +...... .+++.. ++.+++.|+.++ .+.+||..+..-..
T Consensus 153 ~~~~l~-s~s--~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~-------~v~~wd~~~~~~~~ 220 (340)
T 1got_B 153 DDNQIV-TSS--GDTTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA-------SAKLWDVREGMCRQ 220 (340)
T ss_dssp ETTEEE-EEE--TTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCSEEE
T ss_pred CCCcEE-EEE--CCCcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC-------cEEEEECCCCeeEE
Confidence 355543 333 235789999988764322 1111111 122222 566777776543 47889988765332
Q ss_pred CCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEE
Q 013797 264 LPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYS 339 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv 339 (436)
. +.........+.+ ++++++.|+.+ ..+..||+.+++-...-... ........+.+ ++++++
T Consensus 221 ~--~~~h~~~v~~v~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 221 T--FTGHESDINAICFFPNGNAFATGSDD------ATCRLFDLRADQELMTYSHD------NIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp E--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCT------TCCSCEEEEEECTTSSEEE
T ss_pred E--EcCCcCCEEEEEEcCCCCEEEEEcCC------CcEEEEECCCCcEEEEEccC------CcccceEEEEECCCCCEEE
Confidence 1 1101111112222 56777777744 35788998876532211111 01111122222 678888
Q ss_pred EecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 340 LETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
.|+..+.|.+||..+..= +..+.. .......+++ ..++..++.|+.++ .+.+|
T Consensus 287 ~g~~d~~i~vwd~~~~~~--~~~~~~--h~~~v~~~~~-s~dg~~l~s~s~D~----~i~iW 339 (340)
T 1got_B 287 AGYDDFNCNVWDALKADR--AGVLAG--HDNRVSCLGV-TDDGMAVATGSWDS----FLKIW 339 (340)
T ss_dssp EEETTSEEEEEETTTCCE--EEEEEC--CSSCEEEEEE-CTTSSCEEEEETTS----CEEEE
T ss_pred EECCCCeEEEEEcccCcE--eeEeec--CCCcEEEEEE-cCCCCEEEEEcCCc----cEEec
Confidence 888888999999876432 222211 0011111221 33566777777763 45555
No 129
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.20 E-value=2.1 Score=40.21 Aligned_cols=201 Identities=12% Similarity=-0.008 Sum_probs=114.2
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCC--CCCCCcccE
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPS--MRRPRCLFA 226 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~--~p~~r~~~~ 226 (436)
...+..+++.......+..-... .. +++. .++.||+.. .....++++++....-+.+.. +..| ..
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~---~~---~l~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~~~~~p---~g 120 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLEN---AI---ALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVSTGLESP---GG 120 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSC---EE---EEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSCC---CE
T ss_pred ccceEEEeCCCCeeEEeecCCCc---eE---EEEEeccccEEEEEe--ccCCceEEEecCCCCceEEEeCCCCCc---cE
Confidence 45577888877666554321111 11 1222 368899874 234689999998776544322 2222 23
Q ss_pred EEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC--CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEE
Q 013797 227 SAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL--PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGE 300 (436)
Q Consensus 227 ~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~ 300 (436)
+++ .++.||+.-.. ...++++++....-+.+ ..+..+ .+.++. ++.||+..-. ....|+
T Consensus 121 lavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~-----~~~~I~ 185 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG-----NTPRIE 185 (349)
T ss_dssp EEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECS-----SSCEEE
T ss_pred EEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccC-----CCCEEE
Confidence 333 47899998542 24688999876543333 122222 233443 6899998631 136799
Q ss_pred EEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEE
Q 013797 301 AYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFK 378 (436)
Q Consensus 301 ~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~ 378 (436)
++|+....-..+..-. .....++++. +++||+.....+.|+++|++...=+.+.... ...-.+++
T Consensus 186 r~~~dG~~~~~~~~~~-------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~----~~~P~gia-- 252 (349)
T 3v64_C 186 ASSMDGSGRRIIADTH-------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG----LPHPFAIT-- 252 (349)
T ss_dssp EEETTSCSCEESCCSS-------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS----CSSEEEEE--
T ss_pred EEeCCCCCcEEEEECC-------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC----CCCceEEE--
Confidence 9998765444443211 1122345554 6899999887889999998764333332111 11223444
Q ss_pred EeCCEEEEEcCC
Q 013797 379 SLGNELLVIGAS 390 (436)
Q Consensus 379 ~~~~~l~v~GG~ 390 (436)
..++.||+....
T Consensus 253 v~~~~ly~td~~ 264 (349)
T 3v64_C 253 VFEDSLYWTDWH 264 (349)
T ss_dssp EETTEEEEEETT
T ss_pred EECCEEEEecCC
Confidence 478899987543
No 130
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.14 E-value=2 Score=41.07 Aligned_cols=219 Identities=9% Similarity=0.034 Sum_probs=99.9
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+...... +..+. ....++. ..++.+++.|+.+ ..+.+||..+.+-.. .+........++
T Consensus 128 ~Dg~i~vwd~~~~~~~~~--l~~h~---~~V~~v~~~~~~~~l~sgs~D--~~i~iwd~~~~~~~~--~~~~h~~~V~~v 198 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERT--LKGHT---DSVQDISFDHSGKLLASCSAD--MTIKLWDFQGFECIR--TMHGHDHNVSSV 198 (410)
T ss_dssp SSSCEEEEETTTCCCCEE--ECCCS---SCEEEEEECTTSSEEEEEETT--SCCCEEETTSSCEEE--CCCCCSSCEEEE
T ss_pred CCCeEEEEECCCCcEEEE--EeccC---CcEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceeE--EEcCCCCCEEEE
Confidence 355788888877653321 11110 0001112 2355666666543 457788887765322 122111122222
Q ss_pred Ee--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE--ECCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 229 TC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 229 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
.+ ++..++.|+.+ ..+.+||..++.-... +.........+. -++.+++.|+.+ ..+..||.
T Consensus 199 ~~~p~~~~l~s~s~D-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D------~~v~vwd~ 263 (410)
T 1vyh_C 199 SIMPNGDHIVSASRD-------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND------QTVRVWVV 263 (410)
T ss_dssp EECSSSSEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT------SCEEEEET
T ss_pred EEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC------CeEEEEEC
Confidence 22 45566666543 3588899988764221 111111111222 256677777644 34678888
Q ss_pred CCCcEEEc-CCCCCCCC----CCCC---------CCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCC
Q 013797 305 YAGTWYHI-PDILKDFP----AETG---------KSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFN 370 (436)
Q Consensus 305 ~~~~W~~v-~~~~~~~~----~~~~---------r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~ 370 (436)
.+..-... ........ .+.. ..........+.+++.|+..+.|.+||..+..-.. .+.. ...
T Consensus 264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~--~~~~--h~~ 339 (410)
T 1vyh_C 264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM--TLVG--HDN 339 (410)
T ss_dssp TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE--EEEC--CSS
T ss_pred CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE--EEEC--CCC
Confidence 77654321 11100000 0000 00000011135677778778899999998764221 1111 001
Q ss_pred CCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 371 RGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 371 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
...++++ ..+++.++.|+.+ ..+.+|
T Consensus 340 ~v~~v~~-~~~g~~l~s~s~D----~~i~vw 365 (410)
T 1vyh_C 340 WVRGVLF-HSGGKFILSCADD----KTLRVW 365 (410)
T ss_dssp CEEEEEE-CSSSSCEEEEETT----TEEEEE
T ss_pred cEEEEEE-cCCCCEEEEEeCC----CeEEEE
Confidence 1112221 3356666677665 356666
No 131
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.13 E-value=1.4 Score=41.23 Aligned_cols=146 Identities=9% Similarity=-0.084 Sum_probs=77.8
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCE-EEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce-e
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASATC--GTF-AFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC-S 275 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~ 275 (436)
..++++|+.+++.+.+.... ......... ++. |++... ... ......++++|..+..++.+.. ..+.... .
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~--~~~~~~~~sp~dg~~l~~~~~-~~~-~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~ 242 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT--AWLGHPIYRPFDDSTVGFCHE-GPH-DLVDARMWLVNEDGSNVRKIKE-HAEGESCTH 242 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES--SCEEEEEEETTEEEEEEEEEC-SCS-SSCSCCCEEEETTSCCCEESSC-CCTTEEEEE
T ss_pred ceEEEEECCCCcEEeeccCC--cccccceECCCCCCEEEEEec-CCC-CCCCceEEEEECCCCceeEeec-cCCCccccc
Confidence 57899999998877664311 111122222 243 544432 111 1122468999998888777644 1111111 1
Q ss_pred EEE-ECCE-EEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEec----------
Q 013797 276 GCY-MDNK-FYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLET---------- 342 (436)
Q Consensus 276 ~~~-~~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg---------- 342 (436)
.+. -+|+ |++.....+. ....++.+|+.+++...+...+. . . ....- +|+++++.+
T Consensus 243 ~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~------~--~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPP------C--S-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCS------E--E-EEEECSSSSEEEEEECCC-------
T ss_pred eEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCC------C--C-CCccCCCCceEEEecCCcceeeccc
Confidence 122 2555 4444322111 22348999999888776654431 1 1 12233 677666532
Q ss_pred ------CCCeEEEEECCCCcEEEcc
Q 013797 343 ------SSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 343 ------~~~~i~~yd~~~~~W~~v~ 361 (436)
....|+.+|+++++.+.+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEE
T ss_pred cccccCCCCcEEEEecccCceEEcc
Confidence 1357999999888766654
No 132
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.07 E-value=0.79 Score=46.42 Aligned_cols=244 Identities=12% Similarity=0.043 Sum_probs=117.5
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECC--CCCEEeCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELE--TNNWFKGPSM 218 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~--t~~W~~l~~~ 218 (436)
..+++.......+..+|+.+.+-...-+... ..+. ...+- +.++|+.+ ....+.++|+. +.+ .+..+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--~p~~---v~~SpDGr~lyv~~---~dg~V~viD~~~~t~~--~v~~i 236 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHI---SRLSASGRYLFVIG---RDGKVNMIDLWMKEPT--TVAEI 236 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEE---EEECTTSCEEEEEE---TTSEEEEEETTSSSCC--EEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--Cccc---eEECCCCCEEEEEc---CCCeEEEEECCCCCCc--EeEEE
Confidence 3456655567899999999876543211111 1111 12222 56788764 24589999996 553 22222
Q ss_pred CCCCcccEEEEe-----CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CC--CCc--------cCCcceeEEEECC
Q 013797 219 RRPRCLFASATC-----GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LP--GMR--------QRRKLCSGCYMDN 281 (436)
Q Consensus 219 p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~--~~p--------~~r~~~~~~~~~g 281 (436)
+....-..++.. ++ .+|+..- ....+.++|..+.+=.. ++ .++ .+|.....+..++
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~-------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAY-------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEE-------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEc-------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 222222233333 34 5776643 23467889977655322 11 111 1121111111222
Q ss_pred EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecCCCeEEEEECCCCcEEE
Q 013797 282 KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNE-LYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 282 ~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
..+++.-. ....++..|........+..++ ..+..+.+.. -+|+ +|+.....+.|.++|.++++=..
T Consensus 310 ~~~vv~~~-----~~g~v~~vd~~~~~~~~v~~i~------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 310 PEFIVNVK-----ETGKILLVDYTDLNNLKTTEIS------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp SEEEEEET-----TTTEEEEEETTCSSEEEEEEEE------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CEEEEEec-----CCCeEEEEecCCCccceeeeee------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 33333211 2456788888776554444333 2222233322 2444 55555567899999999875332
Q ss_pred cccC-CCccCCCCCceEEEEEe-CCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEeec
Q 013797 360 LGLV-PVRADFNRGWGIAFKSL-GNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLEC 419 (436)
Q Consensus 360 v~~~-p~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~~ 419 (436)
.-.. ...+ .-+.++.+..- ++.+|+.+.... ..+.++..+|+. -....|+.+..
T Consensus 379 ~i~vgg~~P--hpg~g~~~~~p~~g~v~~t~~~g~---~~Vsvid~~~~~-~~~~~~kvv~~ 434 (567)
T 1qks_A 379 IEDTGGQTP--HPGRGANFVHPTFGPVWATSHMGD---DSVALIGTDPEG-HPDNAWKILDS 434 (567)
T ss_dssp EEECSSSSB--CCTTCEEEEETTTEEEEEEEBSSS---SEEEEEECCTTT-CTTTBTSEEEE
T ss_pred EEeccCcCC--CCccceeeECCCCCcEEEeCCCCC---CeEEEecCCCCC-CccccCEEEEE
Confidence 2122 1112 22223443222 467777653221 356677444321 12234877663
No 133
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.03 E-value=1.7 Score=40.88 Aligned_cols=208 Identities=8% Similarity=-0.119 Sum_probs=100.9
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
-+|.+.++++......+.+||+.+.+-........ .-..++.. ++++++.++.+ .+.+++..++.-...
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~--~V~~v~fspdg~~l~s~s~~--------~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG--EVKDLHFSTDGKVVAYITGS--------SLEVISTVTGSCIAR 212 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS--CCCEEEECTTSSEEEEECSS--------CEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC--ceEEEEEccCCceEEeccce--------eEEEEEeccCcceee
Confidence 35555544433345689999999887544322111 12223322 56666655421 366777777664332
Q ss_pred CCCccCCc--ceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCC-CCEEEEE--CCEEEE
Q 013797 265 PGMRQRRK--LCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKS-PPLIAVV--NNELYS 339 (436)
Q Consensus 265 ~~~p~~r~--~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~-~~~~~~~--~g~lyv 339 (436)
........ ...+..-+++.++.++.++.. ...+..+|.............. ..+. ....+.+ +|++++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQV-----TNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEE-----ESSCSCEEEEEECTTSCEEE
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeee-----cCCCCCeEeEEECCCCCceE
Confidence 11111111 112223478888877655432 2345677776665543321110 0111 1112222 788888
Q ss_pred EecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEee
Q 013797 340 LETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
.|+..+.|.+||.++.+-. ..+... ....-.++++ ..++++++.|+.+ ..+.+|...+.....+..|+++.
T Consensus 286 sgs~D~~V~iwd~~~~~~~--~~~~~g-H~~~V~~v~f-Spdg~~laS~S~D----~tvrvw~ip~~~~~~~s~~~~l~ 356 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMS--KIFKQA-HSFAITEVTI-SPDSTYVASVSAA----NTIHIIKLPLNYANYTSMKQKIS 356 (365)
T ss_dssp EEETTSCEEEEETTTTEEE--EEETTS-SSSCEEEEEE-CTTSCEEEEEETT----SEEEEEECCTTTTC---------
T ss_pred EEcCCCEEEEEECCCCcEE--EEecCc-ccCCEEEEEE-CCCCCEEEEEeCC----CeEEEEEcCCCCcCccCccccce
Confidence 8888889999999876432 221111 1111122222 3467888888777 47888854332222333555554
No 134
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.98 E-value=0.89 Score=43.26 Aligned_cols=134 Identities=7% Similarity=-0.042 Sum_probs=74.7
Q ss_pred CCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEE
Q 013797 199 GGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGC 277 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~ 277 (436)
...+.+||..+++............-.+++.. ++..+++|+.++ .+.+||..+++-... +.........+
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~--~~~~~~~v~~~ 182 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG-------LVDIYDVESQTKLRT--MAGHQARVGCL 182 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEE--ECCCSSCEEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC-------eEEEEECcCCeEEEE--ecCCCCceEEE
Confidence 35799999999887655443322222223322 556666665442 488899887764322 11111122233
Q ss_pred EECCEEEEEeccCCCCCcCCEEEEEECCCCc--EEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECC
Q 013797 278 YMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKD 353 (436)
Q Consensus 278 ~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~ 353 (436)
..++.+++.|+. ...+..||+.... -..+.... .....+.. ++.+++.|+..+.|.+||..
T Consensus 183 ~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 183 SWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQGHS---------SEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp EEETTEEEEEET------TSEEEEEETTSSSCEEEEEECCS---------SCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EECCCEEEEEcC------CCCEEEEecccCcceeeEEcCCC---------CCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 446667777763 3468899987432 11111111 11111222 67778888878899999998
Q ss_pred CCc
Q 013797 354 SNS 356 (436)
Q Consensus 354 ~~~ 356 (436)
+.+
T Consensus 248 ~~~ 250 (401)
T 4aez_A 248 SSI 250 (401)
T ss_dssp CSS
T ss_pred CCC
Confidence 754
No 135
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.96 E-value=0.17 Score=46.91 Aligned_cols=155 Identities=14% Similarity=0.038 Sum_probs=84.5
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS- 263 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~- 263 (436)
.++.||+.+. ....+++||+.+++.+.+.... ...-.+++.- ++++|+....... ....+.+||+.++.-+.
T Consensus 54 ~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 54 RQGQLFLLDV--FEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFK---STGGIFAATENGDNLQDI 127 (333)
T ss_dssp TTSCEEEEET--TTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSS---SCCEEEEECTTSCSCEEE
T ss_pred CCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCC---CCceEEEEeCCCCEEEEE
Confidence 3667887653 2357999999999877653211 1112233332 6778887543211 12468999998887652
Q ss_pred CCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEE
Q 013797 264 LPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSL 340 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~ 340 (436)
+............++ -+|++|+.............++.||+.+++...+.... . ...+++.. +| .||+.
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~-~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-------S-VANGIALSTDEKVLWVT 199 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-------S-SEEEEEECTTSSEEEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-------C-cccceEECCCCCEEEEE
Confidence 221111111112222 26788886532111112356899998877765543110 0 11123322 44 58887
Q ss_pred ecCCCeEEEEECCC
Q 013797 341 ETSSNELRVYLKDS 354 (436)
Q Consensus 341 gg~~~~i~~yd~~~ 354 (436)
....+.|++||+++
T Consensus 200 ~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 200 ETTANRLHRIALED 213 (333)
T ss_dssp EGGGTEEEEEEECT
T ss_pred eCCCCeEEEEEecC
Confidence 65567899999864
No 136
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.96 E-value=2.4 Score=39.72 Aligned_cols=183 Identities=10% Similarity=-0.064 Sum_probs=103.7
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCC--C
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGP--S 217 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~--~ 217 (436)
..+|+.-.....++.+++....-..+........ . .++. .++.||+... ....++++++....-+.+. .
T Consensus 85 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p--~---glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~~~~ 157 (349)
T 3v64_C 85 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP--G---GLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRKVLLWQS 157 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC--C---EEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECTT
T ss_pred cEEEEEeccCCceEEEecCCCCceEEEeCCCCCc--c---EEEEecCCCeEEEEcC--CCCeEEEEcCCCCceEEEEeCC
Confidence 4445443345677788877655443321111111 1 1333 4789998743 2357899998765433322 2
Q ss_pred CCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce-eEEE--ECCEEEEEeccCCC
Q 013797 218 MRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC-SGCY--MDNKFYVIGGRNEK 292 (436)
Q Consensus 218 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~--~~g~iyv~gG~~~~ 292 (436)
+..| ..+++- ++.||+..-.. ...++++++....-+.+... ....+ +.++ .+++||+...
T Consensus 158 l~~P---~~iavdp~~g~ly~td~~~------~~~I~r~~~dG~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~---- 222 (349)
T 3v64_C 158 LEKP---RAIALHPMEGTIYWTDWGN------TPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDA---- 222 (349)
T ss_dssp CSCE---EEEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEESCCS--SCSCEEEEEEETTTTEEEEEET----
T ss_pred CCCc---ceEEEecCcCeEEEeccCC------CCEEEEEeCCCCCcEEEEEC--CCCCcceEEEeCCCCEEEEEEC----
Confidence 2222 233333 78999985321 24699999876544444221 11222 2333 2789999864
Q ss_pred CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC
Q 013797 293 DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
....|+++|+....-..+.... .....++++.++.||+.....+.|.++|..++
T Consensus 223 --~~~~I~~~~~dG~~~~~~~~~~-------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 223 --KHHVIERANLDGSHRKAVISQG-------LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp --TTTEEEEEETTSCSCEEEECSS-------CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred --CCCEEEEEeCCCCceEEEEeCC-------CCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 3467899998754323222111 11234567789999999887889999996554
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.95 E-value=0.5 Score=47.61 Aligned_cols=161 Identities=12% Similarity=0.017 Sum_probs=81.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-CCC--C--------CCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-GPS--M--------RRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERY 254 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~--~--------p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 254 (436)
+..+|+.+. ....+.++|..|.+-.+ ++. + +.++.......- +..+|+.... ...+.++
T Consensus 237 g~~l~v~~~--~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-------~g~i~vv 307 (543)
T 1nir_A 237 DRYTIAGAY--WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-------TGKVLLV 307 (543)
T ss_dssp TTEEEEEEE--ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-------TTEEEEE
T ss_pred CCEEEEEEc--cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-------CCeEEEE
Confidence 445666532 24578899998877433 221 1 122222222222 4455555432 2468889
Q ss_pred eCCCCCeEeCCCCccCCcceeEEEE-CCE-EEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE
Q 013797 255 NPETKSWDSLPGMRQRRKLCSGCYM-DNK-FYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 255 d~~t~~W~~~~~~p~~r~~~~~~~~-~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~ 332 (436)
|..+.+-..+..++..+.-+..++. +|+ +|+.+. ..+.+.++|+.+++-...-+... .|.+..+..++.
T Consensus 308 d~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~------~~~~v~v~D~~tg~l~~~i~~g~---~ph~g~g~~~~~ 378 (543)
T 1nir_A 308 NYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAAN------NSNKVAVIDSKDRRLSALVDVGK---TPHPGRGANFVH 378 (543)
T ss_dssp ECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSS---SBCCTTCEEEEE
T ss_pred EecCCCcceeEEeccCcCccCceECCCCCEEEEEec------CCCeEEEEECCCCeEEEeeccCC---CCCCCCCcccCC
Confidence 9876542111111222222333332 555 555442 24578899999886543222110 001112222211
Q ss_pred E-CCEEEEEec-CCCeEEEEECCCC-----cEEEcccCCC
Q 013797 333 V-NNELYSLET-SSNELRVYLKDSN-----SWKNLGLVPV 365 (436)
Q Consensus 333 ~-~g~lyv~gg-~~~~i~~yd~~~~-----~W~~v~~~p~ 365 (436)
- ++.+|+.+. ..+.|.+||.++. .|+.+..++.
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 1 378888764 3578999998772 3888876654
No 138
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.89 E-value=4.1 Score=42.00 Aligned_cols=208 Identities=15% Similarity=0.119 Sum_probs=107.4
Q ss_pred CeEEEeccCCCeEEEEecCCCC--eEeCCCCCCCCC----ccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EE
Q 013797 142 PSVFMLASGDSSWWAFDRHFQT--RRKLPELPSDPC----FKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WF 213 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~~----~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~ 213 (436)
..+|+... ...++++|..+++ |+.-...+.... ........+..++.||+.. ....++.+|..|++ |+
T Consensus 67 g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 67 GVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT---LDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC---TTSEEEEEETTTCCEEEE
T ss_pred CEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc---CCCEEEEEECCCCCEeee
Confidence 34444432 4578899987754 775433321100 0000112456788888864 23579999999987 87
Q ss_pred eCCCCCC--CCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeC--CCCccCC----------------
Q 013797 214 KGPSMRR--PRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSL--PGMRQRR---------------- 271 (436)
Q Consensus 214 ~l~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~--~~~p~~r---------------- 271 (436)
.-..-+. .....+.++.++.+|+..+..... ....+..||..+++ |+.- +.-|...
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~--~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG--VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTC--CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcC--CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 6432111 112223345688888754322111 23578999999887 8752 2111100
Q ss_pred ----------cceeEEEE--CCEEEEEeccC------------CCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCC
Q 013797 272 ----------KLCSGCYM--DNKFYVIGGRN------------EKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGK 325 (436)
Q Consensus 272 ----------~~~~~~~~--~g~iyv~gG~~------------~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r 325 (436)
.....++- ++.+|+-.+.. +...+...+.++|+.++ .|+.-......... ..-
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~-~~~ 299 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF-TAT 299 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC-CCC
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc-cCC
Confidence 00112332 56777764421 11123457999999988 58764321100000 000
Q ss_pred CCCEE--EEECCE---EEEEecCCCeEEEEECCCCc
Q 013797 326 SPPLI--AVVNNE---LYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 326 ~~~~~--~~~~g~---lyv~gg~~~~i~~yd~~~~~ 356 (436)
..+.+ ..++|+ +++++...+.++++|.++.+
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 01111 124665 45555556778888887765
No 139
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.89 E-value=1.6 Score=41.09 Aligned_cols=147 Identities=10% Similarity=0.058 Sum_probs=75.8
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC----Cccc-EEEEe-C-CEEEEEcCcCCCCCCccceEEEEeCCCCC
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP----RCLF-ASATC-G-TFAFVAGGHGMDGSGVLNSAERYNPETKS 260 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~----r~~~-~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 260 (436)
+.+++.|+. ...+.+||..+.+-...-..... .... +++.. + ..+++.|+.++. ...+.+||..+..
T Consensus 178 ~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 178 AHVFASAGS--SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN----DPSILIWDLRNAN 251 (416)
T ss_dssp TTEEEEESS--SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS----SCCCCEEETTSTT
T ss_pred CcEEEEEcC--CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC----CceEEEEeCCCCC
Confidence 456666653 35699999988765433222211 1122 22222 2 356666654431 1247889988753
Q ss_pred eEeCCCCc-cCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCCCEEEEE-C
Q 013797 261 WDSLPGMR-QRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSPPLIAVV-N 334 (436)
Q Consensus 261 W~~~~~~p-~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~~~~~~-~ 334 (436)
- .+..+. ........+.+ ++++++.|+.+ ..+.+||+.+.+-.. +.... . ....++.. +
T Consensus 252 ~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~~------~--~v~~~~~s~~ 316 (416)
T 2pm9_A 252 T-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD------NTVLLWNPESAEQLSQFPARG------N--WCFKTKFAPE 316 (416)
T ss_dssp S-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS------SEEEEECSSSCCEEEEEECSS------S--CCCCEEECTT
T ss_pred C-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC------CCEEEeeCCCCccceeecCCC------C--ceEEEEECCC
Confidence 1 111111 11111222222 56777777643 468899988764322 11111 0 11122222 4
Q ss_pred C-EEEEEecCCCeEEEEECCCC
Q 013797 335 N-ELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 335 g-~lyv~gg~~~~i~~yd~~~~ 355 (436)
+ .+++.++..+.|.+||..+.
T Consensus 317 ~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 317 APDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CTTEEEECCSSSEEEEEESCCC
T ss_pred CCCEEEEEecCCcEEEEEccCC
Confidence 4 67888877889999998764
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.83 E-value=1.2 Score=41.23 Aligned_cols=215 Identities=11% Similarity=0.094 Sum_probs=100.6
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCCcccE-
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPRCLFA- 226 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r~~~~- 226 (436)
....+..||..+..-....+..... .. ......++..++.||. ...+.+||..+.. .+....+........
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~~~--v~--~~~~s~~~~~l~s~~~--d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~ 148 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRSSW--VM--TCAYAPSGNYVACGGL--DNICSIYNLKTREGNVRVSRELAGHTGYLSC 148 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSSC--EE--EEEECTTSSEEEEEET--TCEEEEEETTTCSBSCEEEEEEECCSSCEEE
T ss_pred CCCcEEEEECCCCCcceEeecCCcc--EE--EEEECCCCCEEEEEeC--CCeEEEEECccCCCcceeEEEecCCCccEEE
Confidence 3557778887765533221111110 00 0112225555566653 3578889987653 111111111111111
Q ss_pred EEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEE
Q 013797 227 SAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 227 ~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
+.. -++. ++.|+.+ ..+.+||..+++-... +.........+.+ ++++++.|+.+ ..+..||
T Consensus 149 ~~~~~~~~-l~s~s~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d------~~v~~wd 212 (340)
T 1got_B 149 CRFLDDNQ-IVTSSGD-------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD------ASAKLWD 212 (340)
T ss_dssp EEEEETTE-EEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred EEECCCCc-EEEEECC-------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC------CcEEEEE
Confidence 222 2455 3444432 2478899987754321 1111111112222 56677777744 3578899
Q ss_pred CCCCcEEE-cCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeC
Q 013797 304 EYAGTWYH-IPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLG 381 (436)
Q Consensus 304 ~~~~~W~~-v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 381 (436)
+.++.-.. +.... . ...+++.. ++.+++.|+..+.|.+||..+.+-... +...........++ ...+
T Consensus 213 ~~~~~~~~~~~~h~------~--~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~~~~v~~~~-~s~~ 281 (340)
T 1got_B 213 VREGMCRQTFTGHE------S--DINAICFFPNGNAFATGSDDATCRLFDLRADQELMT--YSHDNIICGITSVS-FSKS 281 (340)
T ss_dssp TTTCSEEEEECCCS------S--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECCTTCCSCEEEEE-ECTT
T ss_pred CCCCeeEEEEcCCc------C--CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEE--EccCCcccceEEEE-ECCC
Confidence 88765322 11111 0 11112222 577788888888999999987643221 11100000011122 1345
Q ss_pred CEEEEEcCCCCCCCCcEEEE
Q 013797 382 NELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 382 ~~l~v~GG~~~~~~~~~~~y 401 (436)
+++++.|+.+ ..+.+|
T Consensus 282 g~~l~~g~~d----~~i~vw 297 (340)
T 1got_B 282 GRLLLAGYDD----FNCNVW 297 (340)
T ss_dssp SSEEEEEETT----SEEEEE
T ss_pred CCEEEEECCC----CeEEEE
Confidence 7777777766 355566
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.83 E-value=1.1 Score=39.66 Aligned_cols=154 Identities=12% Similarity=-0.063 Sum_probs=77.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCC-CCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPET-KSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~ 264 (436)
-+..|..........+++||+.+++...+..... ...+++.. +++.+++++ + ..+.++|..+ ++...+
T Consensus 9 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~-~-------~~i~~~d~~~~~~~~~~ 78 (297)
T 2ojh_A 9 HTRLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS-E-------GLLYRLSLAGDPSPEKV 78 (297)
T ss_dssp ---------CCCCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE-T-------TEEEEEESSSCCSCEEC
T ss_pred eeeEeecCCCCcceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc-C-------CeEEEEeCCCCCCceEe
Confidence 3445554443445789999999988766543221 11222222 455555543 1 2589999998 777666
Q ss_pred CCCcc-CCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCE-EEEEe
Q 013797 265 PGMRQ-RRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNE-LYSLE 341 (436)
Q Consensus 265 ~~~p~-~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~-lyv~g 341 (436)
..... .........-+++.+++++.... ....++.+|..++.-..+.... . ...+... +++ |++.+
T Consensus 79 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~------~---~~~~~~spdg~~l~~~~ 147 (297)
T 2ojh_A 79 DTGFATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNL------P---SYWHGWSPDGKSFTYCG 147 (297)
T ss_dssp CCTTCCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSS------S---EEEEEECTTSSEEEEEE
T ss_pred ccccccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCC------C---ccceEECCCCCEEEEEE
Confidence 43322 11112222236665555553222 2467899998877755554322 1 1111222 444 55444
Q ss_pred cCCC--eEEEEECCCCcEEEcc
Q 013797 342 TSSN--ELRVYLKDSNSWKNLG 361 (436)
Q Consensus 342 g~~~--~i~~yd~~~~~W~~v~ 361 (436)
...+ .++.+|..+.....+.
T Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 148 IRDQVFDIYSMDIDSGVETRLT 169 (297)
T ss_dssp EETTEEEEEEEETTTCCEEECC
T ss_pred CCCCceEEEEEECCCCcceEcc
Confidence 4334 5666677777766654
No 142
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.82 E-value=0.62 Score=42.84 Aligned_cols=234 Identities=12% Similarity=0.134 Sum_probs=110.2
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe---CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcc-c
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA---GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCL-F 225 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~-~ 225 (436)
....+..||..++....+..+..+.. ...+++.. ++.+++.|+. ...+.+||..+++|..+..+...... .
T Consensus 33 ~D~~v~lwd~~~~~~~~~~~l~gH~~---~V~~v~~~~~~~~~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~V~ 107 (316)
T 3bg1_A 33 SDRSVKIFDVRNGGQILIADLRGHEG---PVWQVAWAHPMYGNILASCSY--DRKVIIWREENGTWEKSHEHAGHDSSVN 107 (316)
T ss_dssp TTTEEEEEEEETTEEEEEEEEECCSS---CEEEEEECCGGGSSCEEEEET--TSCEEEECCSSSCCCEEEEECCCSSCCC
T ss_pred CCCeEEEEEecCCCcEEEEEEcCCCc---cEEEEEeCCCCCCCEEEEEEC--CCEEEEEECCCCcceEEEEccCCCCceE
Confidence 35567788877654322222211111 10112221 2455555553 35688999988776544332211111 2
Q ss_pred EEEEe-C--CEEEEEcCcCCCCCCccceEEEEeCCCC-CeEeCCCCccCCcceeEEEE-------------------CCE
Q 013797 226 ASATC-G--TFAFVAGGHGMDGSGVLNSAERYNPETK-SWDSLPGMRQRRKLCSGCYM-------------------DNK 282 (436)
Q Consensus 226 ~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~~~~~~~~-------------------~g~ 282 (436)
+++.. + +.+++.|+.++ .+.++|..+. .|.....+.........+.. .++
T Consensus 108 ~v~~~p~~~g~~lasgs~D~-------~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
T 3bg1_A 108 SVCWAPHDYGLILACGSSDG-------AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK 180 (316)
T ss_dssp EEEECCTTTCSCEEEECSSS-------CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC
T ss_pred EEEECCCCCCcEEEEEcCCC-------CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccc
Confidence 22222 2 55666666543 3677777665 46543222111100001111 134
Q ss_pred EEEEeccCCCCCcCCEEEEEECCC-CcEEEcCCCCCCCCCCCCCCCCEEEEE--C----CEEEEEecCCCeEEEEECCC-
Q 013797 283 FYVIGGRNEKDKPLTCGEAYDEYA-GTWYHIPDILKDFPAETGKSPPLIAVV--N----NELYSLETSSNELRVYLKDS- 354 (436)
Q Consensus 283 iyv~gG~~~~~~~~~~v~~yD~~~-~~W~~v~~~~~~~~~~~~r~~~~~~~~--~----g~lyv~gg~~~~i~~yd~~~- 354 (436)
+++.|+.+ ..+..||..+ +.|..+..+.. .......+.. + +.+++.++..+.|.+||..+
T Consensus 181 ~l~sgs~D------~~v~lWd~~~~~~~~~~~~l~~------h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 181 RFASGGCD------NLIKLWKEEEDGQWKEEQKLEA------HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp BEECCBTT------SBCCEEEECTTSCEEEEECCBC------CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred eEEEecCC------CeEEEEEeCCCCccceeeeccc------CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 55666543 2356677653 45766555431 1011111221 2 26677777788999999875
Q ss_pred --CcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEeecC
Q 013797 355 --NSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLECG 420 (436)
Q Consensus 355 --~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~~~ 420 (436)
..|... .+.. .......+++ ..++.+++.|+.+ ..+.+|... ....|..+..+
T Consensus 249 ~~~~~~~~-~~~~--~~~~v~~v~~-sp~g~~las~~~D----~~v~lw~~~-----~~g~~~~~~~~ 303 (316)
T 3bg1_A 249 SSNTWSPK-LLHK--FNDVVWHVSW-SITANILAVSGGD----NKVTLWKES-----VDGQWVCISDV 303 (316)
T ss_dssp TCCCCBCC-EEEE--CSSCEEEEEE-CTTTCCEEEEESS----SCEEEEEEC-----TTSCEEEEEEC
T ss_pred cccchhhh-hhhc--CCCcEEEEEE-cCCCCEEEEEcCC----CeEEEEEEC-----CCCcEEEeeec
Confidence 334211 0100 0111122222 3456777777776 467777322 13479888744
No 143
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.78 E-value=0.42 Score=43.46 Aligned_cols=187 Identities=11% Similarity=0.071 Sum_probs=91.7
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeC-CCCCCCCCccCCCeeeEEeCCEEEEEceecC-------------CCeEEEEECC
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKL-PELPSDPCFKLGDKESLCAGTHLIVSGNEIE-------------GGVIWRYELE 208 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l-~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-------------~~~v~~ydp~ 208 (436)
.+++... ...++.||+. ++...+ ...............+...++.+|+...... ...++++|+.
T Consensus 84 ~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 84 QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 3444333 3368889988 776655 3322111111111112334678887653221 1479999987
Q ss_pred CCCEEeCCC-CCCCCcccEEEEe-----CC-EEEEEcCcCCCCCCccceEEEEeCC-CCCeEe---CCCCccCC-cceeE
Q 013797 209 TNNWFKGPS-MRRPRCLFASATC-----GT-FAFVAGGHGMDGSGVLNSAERYNPE-TKSWDS---LPGMRQRR-KLCSG 276 (436)
Q Consensus 209 t~~W~~l~~-~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~---~~~~p~~r-~~~~~ 276 (436)
++...+.. +..+ ...+.. ++ .+|+.... ...+.+||+. +++... ...++... .....
T Consensus 162 -g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 230 (314)
T 1pjx_A 162 -GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG 230 (314)
T ss_dssp -SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE
T ss_pred -CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCCCCCCCCCc
Confidence 66554321 1111 222322 33 57776432 2357888875 343321 11111111 11222
Q ss_pred EEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecCCCeEEEEEC
Q 013797 277 CYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNE-LYSLETSSNELRVYLK 352 (436)
Q Consensus 277 ~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~~~~i~~yd~ 352 (436)
+.. +|.+|+... ..+.+.+||+.+++-...-..+ . ....+++. -+++ ||+.....+.|++|++
T Consensus 231 i~~d~~G~l~v~~~------~~~~i~~~d~~~g~~~~~~~~~------~-~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 231 MDFDEDNNLLVANW------GSSHIEVFGPDGGQPKMRIRCP------F-EKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEBTTCCEEEEEE------TTTEEEEECTTCBSCSEEEECS------S-SCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred eEECCCCCEEEEEc------CCCEEEEEcCCCCcEeEEEeCC------C-CCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 222 678888753 1346899999855421111111 1 11122232 1455 8888766679999998
Q ss_pred CCC
Q 013797 353 DSN 355 (436)
Q Consensus 353 ~~~ 355 (436)
+..
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 764
No 144
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.71 E-value=1.7 Score=39.24 Aligned_cols=183 Identities=9% Similarity=-0.018 Sum_probs=93.8
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEE----cee-----------cCCCeEEEEECC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVS----GNE-----------IEGGVIWRYELE 208 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~----GG~-----------~~~~~v~~ydp~ 208 (436)
+++...+...+..||+.+++...+...............++.-+|.+|+. |.. .....++++++.
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 44444445678899998887765532211111111111233447788886 321 013479999987
Q ss_pred CCCEEeCCC-CCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCC-CCCe-E--eCCCCccCCcceeEEE-ECC
Q 013797 209 TNNWFKGPS-MRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPE-TKSW-D--SLPGMRQRRKLCSGCY-MDN 281 (436)
Q Consensus 209 t~~W~~l~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W-~--~~~~~p~~r~~~~~~~-~~g 281 (436)
++...+.. +..+ ..++.. ++++++.... ...+++||.. +++. . .+-....... .+.++ -+|
T Consensus 162 -g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G 229 (296)
T 3e5z_A 162 -GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTG-------DNATHRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGG 229 (296)
T ss_dssp -SCEEEEECCCSSE---EEEEECTTSCEEEEETT-------TTEEEEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTS
T ss_pred -CCEEEeecCCCCC---ccEEECCCCCEEEEeCC-------CCeEEEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCC
Confidence 65554422 1111 222222 5555554332 2358888876 4554 1 1111111111 12222 368
Q ss_pred EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C-CEEEEEecCCCeEEEEECCCCcE
Q 013797 282 KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N-NELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 282 ~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~-g~lyv~gg~~~~i~~yd~~~~~W 357 (436)
+||+.. ...+.+||+.......+.. + .. ...++.- + +.||+... +.+++++++++.-
T Consensus 230 ~l~v~~--------~~~v~~~~~~g~~~~~~~~-~------~~--~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 230 LIWASA--------GDGVHVLTPDGDELGRVLT-P------QT--TSNLCFGGPEGRTLYMTVS--TEFWSIETNVRGL 289 (296)
T ss_dssp CEEEEE--------TTEEEEECTTSCEEEEEEC-S------SC--CCEEEEESTTSCEEEEEET--TEEEEEECSCCBC
T ss_pred CEEEEc--------CCeEEEECCCCCEEEEEEC-C------CC--ceeEEEECCCCCEEEEEcC--CeEEEEEcccccc
Confidence 888876 1358999998555444432 2 11 1223332 2 26777653 6899999987643
No 145
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.69 E-value=2.2 Score=37.91 Aligned_cols=175 Identities=9% Similarity=-0.077 Sum_probs=96.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.||+... ....++++++.+..-..+.+.... .-+.+++- ++.||+.... ...+.++|+....-+.+
T Consensus 47 ~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 47 DKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDLG-SPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp TTEEEEEET--TTTEEEEEESSSCCCEEEECTTCC-CEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEE
T ss_pred CCEEEEEEC--CCCEEEEEecCCCCcEEEEECCCC-CccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEE
Confidence 678998742 346899999987653332211111 12333442 5799998542 24688899875443332
Q ss_pred CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEE
Q 013797 265 PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSL 340 (436)
Q Consensus 265 ~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~ 340 (436)
...... .-...++. +++||+..... ....++++++....-..+.... .....++++. ++.||+.
T Consensus 117 ~~~~~~-~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~-------~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 117 FDTGLV-NPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDN-------LGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp ECSSCS-SEEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTT-------CSCEEEEEEETTTTEEEEE
T ss_pred EECCCC-CccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECC-------CCCCcEEEEcCCCCEEEEE
Confidence 111111 11233343 68999986321 1357888888654433332111 1122334444 4689999
Q ss_pred ecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCC
Q 013797 341 ETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 341 gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
....+.|.++|+++..-+.+. +.. ..-.+++ ..++.||+....
T Consensus 185 d~~~~~I~~~~~~g~~~~~~~--~~~---~~P~gi~--~d~~~lyva~~~ 227 (267)
T 1npe_A 185 DAGTHRAECLNPAQPGRRKVL--EGL---QYPFAVT--SYGKNLYYTDWK 227 (267)
T ss_dssp ETTTTEEEEEETTEEEEEEEE--ECC---CSEEEEE--EETTEEEEEETT
T ss_pred ECCCCEEEEEecCCCceEEEe--cCC---CCceEEE--EeCCEEEEEECC
Confidence 877889999999864322221 111 1113344 558899997544
No 146
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.63 E-value=0.73 Score=44.23 Aligned_cols=140 Identities=7% Similarity=0.043 Sum_probs=77.0
Q ss_pred EEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC
Q 013797 190 LIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM 267 (436)
Q Consensus 190 iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 267 (436)
++.+|- ++.+++||..|++-.++-.+........++.+ ++..++.|+.++ .+.++|..+++-... +
T Consensus 118 ~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-------~v~iWd~~~~~~~~~--~ 185 (420)
T 4gga_A 118 VLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRN--M 185 (420)
T ss_dssp EEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEE--E
T ss_pred EEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-------eEEEEEcCCCcEEEE--E
Confidence 444442 35899999999987665444333322333333 566777776543 488899987753221 1
Q ss_pred ccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE--cCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCC
Q 013797 268 RQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH--IPDILKDFPAETGKSPPLIA-VVNNELYSLETSS 344 (436)
Q Consensus 268 p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~--v~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~ 344 (436)
........+...++.+.+.|+.+ ..+..+|........ +.... . ....+. ..++..++.++..
T Consensus 186 ~~h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~------~--~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 186 TSHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHS------Q--EVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp CCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCS------S--CEEEEEECTTSSEEEEEETT
T ss_pred eCCCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEecccc------c--ceeeeeecCCCCeeeeeecc
Confidence 11111223445577777777643 456778876543221 11111 0 000111 1256667777777
Q ss_pred CeEEEEECCCC
Q 013797 345 NELRVYLKDSN 355 (436)
Q Consensus 345 ~~i~~yd~~~~ 355 (436)
+.+.+||..+.
T Consensus 252 ~~v~i~~~~~~ 262 (420)
T 4gga_A 252 NLVNVWPSAPG 262 (420)
T ss_dssp SCEEEEESSCC
T ss_pred ccceEEeeccc
Confidence 88999998764
No 147
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.61 E-value=2.8 Score=39.37 Aligned_cols=181 Identities=12% Similarity=0.053 Sum_probs=86.8
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCC--------------cccEEEEeCCEEEEEcCcCCCCCCccceEE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPR--------------CLFASATCGTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
++..++.++. ...+.+||..+++-...-...... ....+....+..+++|+.+ ..+.
T Consensus 160 ~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~i~ 230 (425)
T 1r5m_A 160 DGTHIISMDV--ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-------GAIF 230 (425)
T ss_dssp TSSEEEEEET--TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG-------GCEE
T ss_pred CCCEEEEEec--CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-------CeEE
Confidence 4444444442 346889999887654322211111 0122222233345566543 2488
Q ss_pred EEeCCCCCeEe-CCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCCCE
Q 013797 253 RYNPETKSWDS-LPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSPPL 329 (436)
Q Consensus 253 ~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~~ 329 (436)
+||..+.+-.. +.. . ...-...+.. ++++++.++.+ ..+.+||..+.+-.. +.... .....
T Consensus 231 ~~d~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--------~~i~~ 294 (425)
T 1r5m_A 231 VYQITEKTPTGKLIG-H-HGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYGHS--------QSIVS 294 (425)
T ss_dssp EEETTCSSCSEEECC-C-SSCEEEEEEETTTTEEEEEETT------SCEEEECSSSBSCSEEECCCS--------SCEEE
T ss_pred EEEcCCCceeeeecc-C-CCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCccceEecCCC--------ccEEE
Confidence 99988764221 111 0 1111122222 56666666633 357889987654211 11111 11122
Q ss_pred EEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 330 IAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 330 ~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
++.. ++ +++.++..+.|.+||..+.+-...-... ......+++ ..+++++++|+.+ ..+.+|.
T Consensus 295 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~-s~~~~~l~~~~~d----g~i~i~~ 358 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD----GVPIFAGRI-SQDGQKYAVAFMD----GQVNVYD 358 (425)
T ss_dssp EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT----TCCEEEEEE-CTTSSEEEEEETT----SCEEEEE
T ss_pred EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC----CccEEEEEE-cCCCCEEEEEECC----CeEEEEE
Confidence 3333 45 6666777889999999876533221111 011111221 2356677777665 3566663
No 148
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.61 E-value=0.51 Score=43.08 Aligned_cols=148 Identities=8% Similarity=-0.020 Sum_probs=79.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
++.||+++. ....+++||+.+++-..... + ..-.+++.. ++.+|+..+ ..+.+||+.+++.+.+.
T Consensus 24 ~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~~---------~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 24 SNSLLFVDI--PAKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATIG---------TKFCALNWKEQSAVVLA 89 (297)
T ss_dssp TTEEEEEET--TTTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEET---------TEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEC--CCCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEEC---------CeEEEEECCCCcEEEEE
Confidence 567887742 34689999999887644321 1 111222322 566666531 25889999998887653
Q ss_pred CCcc--CCcceeEEEE--CCEEEEEeccCCC-----CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC
Q 013797 266 GMRQ--RRKLCSGCYM--DNKFYVIGGRNEK-----DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN 335 (436)
Q Consensus 266 ~~p~--~r~~~~~~~~--~g~iyv~gG~~~~-----~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g 335 (436)
.... +........+ +|+||+..-.... ......++.+|+.. +...+.... ....+++.. ++
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~--------~~pngi~~spdg 160 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQV--------DISNGLDWSLDH 160 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEE--------SBEEEEEECTTS
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecc--------ccccceEEcCCC
Confidence 3221 1111222222 6788875321110 01234688888753 333322110 011123333 34
Q ss_pred -EEEEEecCCCeEEEEEC--CCCcE
Q 013797 336 -ELYSLETSSNELRVYLK--DSNSW 357 (436)
Q Consensus 336 -~lyv~gg~~~~i~~yd~--~~~~W 357 (436)
.||+.....+.|++||. ++...
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred CEEEEecCCCCcEEEEeccCCCCcc
Confidence 68888876788999986 45543
No 149
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.28 Score=45.54 Aligned_cols=192 Identities=9% Similarity=0.106 Sum_probs=90.1
Q ss_pred CCEEEEEceecCCCeEEEEECCC--CCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELET--NNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t--~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++..++.|+. ...+.+||..+ ..++.+..+.........+.+ ++.+++.|+.++ .+.++|..++.|.
T Consensus 118 ~g~~las~s~--D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-------~i~iW~~~~~~~~ 188 (330)
T 2hes_X 118 DGYYLATCSR--DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-------TVRIWKDYDDDWE 188 (330)
T ss_dssp TSCEEEEEET--TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-------CEEEEEEETTEEE
T ss_pred CCCEEEEEeC--CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-------eEEEEECCCCCee
Confidence 4555555553 34688888743 233333222211122222222 456666666543 3777887777665
Q ss_pred eCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCC------CcEEEcCCCCCCCCCCCCCCCCEEEE
Q 013797 263 SLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYA------GTWYHIPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~------~~W~~v~~~~~~~~~~~~r~~~~~~~ 332 (436)
.+..+.........+.+ + +.+.+.|+.++ .+..||+.+ ..|..+..++.. .......++.
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~v~~ 258 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS------TVRVWKYMGDDEDDQQEWVCEAILPDV----HKRQVYNVAW 258 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTS------CEEEEEEEEECTTSCEEEEEEEECCSC----CSSCEEEEEE
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC------eEEEEEecCCCccccceeEEeeecccc----cccceEEEEE
Confidence 54332211111111222 2 34455565432 355565533 245544433310 0111112222
Q ss_pred ECCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEe-CCEEEEEcCCCCCCCCcEEEE
Q 013797 333 VNNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSL-GNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 333 ~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~y 401 (436)
..+.+++.++..+.|.+||..++.|+.+..............+++... ++.+++.|+.+ ..+.+|
T Consensus 259 s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D----g~v~~W 324 (330)
T 2hes_X 259 GFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD----GIVNFW 324 (330)
T ss_dssp CTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT----SEEEEE
T ss_pred cCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC----CcEEEE
Confidence 344556667778899999999888876543221100001111222111 56777888876 356677
No 150
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.57 E-value=0.86 Score=47.46 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=86.3
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCC--CCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPS--MRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.++.||+... ....++++++....-+.+.. +..|+ .+++ .++.||+..-. ....++++++....-
T Consensus 463 ~~g~LY~tD~--~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~------~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 463 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNGVDI 531 (699)
T ss_dssp SSSBCEECCT--TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS------SSCCEEBCCSSSCCC
T ss_pred eCCcEEEEec--cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC------CCCeEEEEeCCCCCe
Confidence 4788988642 23578999988766554432 33333 2233 36788887421 123577777754332
Q ss_pred EeCCCCccCCcce-eEEE--ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 262 DSLPGMRQRRKLC-SGCY--MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 262 ~~~~~~p~~r~~~-~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
+.+.... ...+ +.++ .+++||+... ....|+++|+....-+.+..... ......++++.++.||
T Consensus 532 ~~l~~~~--l~~PnGlavd~~~~~LY~aD~------~~~~I~~~d~dG~~~~~~~~~~~-----~~~~P~glavd~~~ly 598 (699)
T 1n7d_A 532 YSLVTEN--IQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFEDKVF 598 (699)
T ss_dssp CEESCSS--CSSCCCEEECTTTCCEEEEET------TTTEEEEECSSSSCCEEECCCSS-----SCSSCCCCEEETTEEE
T ss_pred eEEEeCC--CCCccEEEEeccCCEEEEEec------CCCeEEEEccCCCceEEEEecCC-----cCCCceEeEEECCEEE
Confidence 2221111 1122 2333 2578999874 34678999987654444433211 1112345677889999
Q ss_pred EEecCCCeEEEEECCCCcE
Q 013797 339 SLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~W 357 (436)
+.....+.|.++|+.+++-
T Consensus 599 wtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 599 WTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EECSTTTCEEEEETTTEEE
T ss_pred EEeCCCCeEEEEEccCCCc
Confidence 9987778999999876543
No 151
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.56 E-value=2.8 Score=38.68 Aligned_cols=216 Identities=10% Similarity=0.019 Sum_probs=106.6
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP 221 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~ 221 (436)
..+++.......++.||+.+++...+. .+.. .. ......++.+++.. ...+++||+.+++.+.+...+..
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~---v~--~i~~~~dg~l~v~~----~~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFM---GS--ALAKISDSKQLIAS----DDGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSC---EE--EEEEEETTEEEEEE----TTEEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCc---ce--EEEEeCCCeEEEEE----CCCEEEEECCCCcEEEEeeCCCC
Confidence 344554444567899999887654432 1211 00 01234577877753 23599999999998766443211
Q ss_pred --CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCCCc
Q 013797 222 --RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKDKP 295 (436)
Q Consensus 222 --r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~~~ 295 (436)
........+ ++.+|+..... ........+++|| +++.+.+.. ......+.+.. ++ .+|+... .
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~-~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~------~ 199 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDT------K 199 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEET------T
T ss_pred CCCCCCCCEEECCCCCEEEEeCCC-cCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEEC------C
Confidence 111112222 56777643211 1111234688888 455544311 00011122222 45 5777653 2
Q ss_pred CCEEEEEECC--CC-c------EEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCC
Q 013797 296 LTCGEAYDEY--AG-T------WYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPV 365 (436)
Q Consensus 296 ~~~v~~yD~~--~~-~------W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~ 365 (436)
...+++||.. ++ + +..+.... ....+++.. +|.||+.....+.|.+||++...-..+. +|.
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~--------~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~-~~~ 270 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIK--------GGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYE-VPG 270 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSS--------SEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEE-CSC
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCC--------CCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEE-CCC
Confidence 3578999975 44 2 22221110 011123332 5788887644578999999654444442 231
Q ss_pred ccCCCCCceEEEE-EeCCEEEEEcCCC
Q 013797 366 RADFNRGWGIAFK-SLGNELLVIGASS 391 (436)
Q Consensus 366 ~~~~~~~~~~~~~-~~~~~l~v~GG~~ 391 (436)
..-.++++. .-++.||+.....
T Consensus 271 ----~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 271 ----KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ----SBEEEEEEESTTSCEEEEEEBCT
T ss_pred ----CCcEEEEEecCCCCEEEEEecCC
Confidence 111223322 1235788875444
No 152
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.54 E-value=3.4 Score=43.52 Aligned_cols=146 Identities=12% Similarity=0.050 Sum_probs=88.9
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCC--CCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGP--SMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.++.||+... ....++++++....-+.+. .+..|+ ++++ .++.||+.--. ....|+++++....=
T Consensus 481 ~~~~LY~tD~--~~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g------~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 481 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNGVDI 549 (791)
T ss_dssp TTTEEEEEET--TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTSCCE
T ss_pred cCCcEEEEec--CCCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC------CCCeEEEEecCCCce
Confidence 4779998742 3468999999876655542 232332 3444 36899998521 124688998875543
Q ss_pred EeCCCCccCCcceeE-EEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 262 DSLPGMRQRRKLCSG-CYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 262 ~~~~~~p~~r~~~~~-~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
+.+.. .....+.+ ++- +++||+... ..+.|+++|+....=..+..... ......++++.+++||
T Consensus 550 ~~lv~--~~l~~P~GLavD~~~~~LYwaD~------~~~~I~~~d~dG~~~~~v~~~~~-----~l~~P~glav~~~~lY 616 (791)
T 3m0c_C 550 YSLVT--ENIQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEK-----RLAHPFSLAVFEDKVF 616 (791)
T ss_dssp EEEEC--SSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEEECTT-----TTSSEEEEEEETTEEE
T ss_pred EEEEe--CCCCCceEEEEecCCCeEEEEeC------CCCcEEEEecCCCceEEEecCCC-----ccCCCCEEEEeCCEEE
Confidence 33321 11122333 333 689999964 34679999987654333322110 1113346778899999
Q ss_pred EEecCCCeEEEEECCCC
Q 013797 339 SLETSSNELRVYLKDSN 355 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~ 355 (436)
+.....+.|++.|..++
T Consensus 617 wtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 617 WTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEETTTTEEEEEETTTC
T ss_pred EEECCCCEEEEEeCCCC
Confidence 99988889999997654
No 153
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.53 E-value=1.4 Score=41.26 Aligned_cols=143 Identities=6% Similarity=-0.023 Sum_probs=76.5
Q ss_pred EEEEEceecCCCeEEEEECCCCCEEeCCCCC-CCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 189 HLIVSGNEIEGGVIWRYELETNNWFKGPSMR-RPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 189 ~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
.+++.|+. ...+.+||..+.+....-... ....-.+++.. ++.+++.|+.+ ..+.++|..+.....+.
T Consensus 87 ~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~ 157 (383)
T 3ei3_B 87 TTVAVGSK--GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVIQVFA 157 (383)
T ss_dssp TEEEEEEB--TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEEEEEE
T ss_pred CEEEEEcC--CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCceEEEe
Confidence 45555543 346889999888765543322 22222233333 34566666543 35888999876655443
Q ss_pred CCccCCc-ceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCE-EEEEe
Q 013797 266 GMRQRRK-LCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNE-LYSLE 341 (436)
Q Consensus 266 ~~p~~r~-~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~-lyv~g 341 (436)
....... -.+.+. -++++.+.|+. ...+..||+....-..+.... .....++.. ++. +++.+
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~h~--------~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDS------TGRLLLLGLDGHEIFKEKLHK--------AKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEET------TSEEEEEETTSCEEEEEECSS--------SCEEEEEECSSCTTEEEEE
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECC------CCCEEEEECCCCEEEEeccCC--------CcEEEEEECCCCCCEEEEE
Confidence 2221111 112222 25666677763 346889998654433332211 011112222 344 77778
Q ss_pred cCCCeEEEEECCC
Q 013797 342 TSSNELRVYLKDS 354 (436)
Q Consensus 342 g~~~~i~~yd~~~ 354 (436)
+..+.|.+||..+
T Consensus 224 ~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 224 SVDATVKLWDLRN 236 (383)
T ss_dssp ETTSEEEEEEGGG
T ss_pred eCCCEEEEEeCCC
Confidence 7788999999986
No 154
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.50 E-value=5.2 Score=41.40 Aligned_cols=208 Identities=15% Similarity=0.136 Sum_probs=106.9
Q ss_pred CeEEEeccCCCeEEEEecCCCC--eEeCCCCCCCC----CccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EE
Q 013797 142 PSVFMLASGDSSWWAFDRHFQT--RRKLPELPSDP----CFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WF 213 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~----~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~ 213 (436)
..+|+... ...++++|..+++ |..-...+... +........+..++.||+.. ....++.+|..|++ |+
T Consensus 71 g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~---~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 71 GVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV---LDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC---TTSEEEEEETTTCCEEEE
T ss_pred CEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc---cCCEEEEEECCCCCEeee
Confidence 34454432 4568899987754 77543322110 00001112456788998864 23579999999987 87
Q ss_pred eCCC-CCC--CCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeC--CCCccCC---------------
Q 013797 214 KGPS-MRR--PRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSL--PGMRQRR--------------- 271 (436)
Q Consensus 214 ~l~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~--~~~p~~r--------------- 271 (436)
.-.. -+. .....+.++.++.+|+..+..... ....+..||..|++ |+.- +.-|...
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~--~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG--VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC--CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccC--CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 6432 111 112223355688888754322111 23478999999887 8753 2111100
Q ss_pred -----------cceeEEEE--CCEEEEEeccC------------CCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCC
Q 013797 272 -----------KLCSGCYM--DNKFYVIGGRN------------EKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETG 324 (436)
Q Consensus 272 -----------~~~~~~~~--~g~iyv~gG~~------------~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~ 324 (436)
.....++- ++.+|+-.+.. +...+...+.++|++++ .|+.-......... ..
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~-~~ 303 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY-TA 303 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC-CC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc-cC
Confidence 00122232 57777754421 11123457999999987 58653221100000 00
Q ss_pred CCCCEEE--EECCE---EEEEecCCCeEEEEECCCCc
Q 013797 325 KSPPLIA--VVNNE---LYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 325 r~~~~~~--~~~g~---lyv~gg~~~~i~~yd~~~~~ 356 (436)
-..+.+. .++|+ +++++...+.++++|.++.+
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 0011111 23554 55555556778888877764
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.46 E-value=1.6 Score=39.71 Aligned_cols=109 Identities=15% Similarity=0.045 Sum_probs=55.2
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCC-CccCCCeeeEEe-CCEEEEEcee-------c--CCCeEEEEECCCC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDP-CFKLGDKESLCA-GTHLIVSGNE-------I--EGGVIWRYELETN 210 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~-~~~~~~~~~~~~-~~~iyv~GG~-------~--~~~~v~~ydp~t~ 210 (436)
..+++.......++.+|+.+.+-...-..+.+. ............ +..+|+.... . ....+++||+.+.
T Consensus 46 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 46 RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 345555555668899999887654322221100 000000012222 4477776421 1 3468999999988
Q ss_pred CEEeCCCCCCCCcccEEEEe-CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 211 NWFKGPSMRRPRCLFASATC-GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 211 ~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
+....-+.. .....++.. ++ .+|+.+ ..+.++|+.+++-.
T Consensus 126 ~~~~~~~~~--~~~~~~~~s~dg~~l~~~~----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 126 SRRKAFEAP--RQITMLAWARDGSKLYGLG----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EEEEEEECC--SSCCCEEECTTSSCEEEES----------SSEEEEETTTTEEE
T ss_pred cEEEEEeCC--CCcceeEECCCCCEEEEeC----------CeEEEEECCCCcEe
Confidence 754322211 112222322 33 477662 24888998877643
No 156
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.46 E-value=4.7 Score=40.78 Aligned_cols=117 Identities=12% Similarity=0.103 Sum_probs=68.2
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCC---C---cccEEEEeCCEEEEEcCcCCCCCCccceEEEE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRP---R---CLFASATCGTFAFVAGGHGMDGSGVLNSAERY 254 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~---r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 254 (436)
-+..++.||+.... ..++.+|..|++ |+.-...+.. . .....++.+++||+... ...+..+
T Consensus 64 P~v~~g~vyv~~~~---~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------dg~l~Al 132 (582)
T 1flg_A 64 AIVSDGVIYVTASY---SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------DASVVAL 132 (582)
T ss_dssp CEEETTEEEEEETT---TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--------TTEEEEE
T ss_pred cEEECCEEEEEcCC---CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--------CCEEEEE
Confidence 35679999987542 249999998887 8765433211 0 11234567889988632 1358899
Q ss_pred eCCCCC--eEeCCCCccCC--cceeEEEECC------EEEEEeccCCCCCcCCEEEEEECCCC--cEEE
Q 013797 255 NPETKS--WDSLPGMRQRR--KLCSGCYMDN------KFYVIGGRNEKDKPLTCGEAYDEYAG--TWYH 311 (436)
Q Consensus 255 d~~t~~--W~~~~~~p~~r--~~~~~~~~~g------~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~ 311 (436)
|.+|++ |+.-...+... ...+.++.++ .+|+-.. .........+.+||..++ .|+.
T Consensus 133 D~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~-~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 133 NKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSS-GDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp ESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCB-CGGGCCBCEEEEECTTTCCEEEEE
T ss_pred ECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEecc-ccccCCCCEEEEEECCCCCEEeec
Confidence 999886 87532211111 1123345566 6665321 110012457899999877 4865
No 157
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.30 E-value=2.3 Score=38.65 Aligned_cols=132 Identities=9% Similarity=0.081 Sum_probs=62.5
Q ss_pred eEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCC
Q 013797 250 SAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSP 327 (436)
Q Consensus 250 ~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~ 327 (436)
.+.+||..+.+-...-... .....++.+ ++++++.|+.+ ..+..||+.+.+-.. .+. .....
T Consensus 196 ~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~~~~--~~~------~~~~v 259 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKD------GQAMLWDLNEGKHLY--TLD------GGDII 259 (340)
T ss_dssp CEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETT------CEEEEEETTTTEEEE--EEE------CSSCE
T ss_pred EEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCC------CeEEEEEeccCceee--eec------CCceE
Confidence 4788898876543221101 111112222 56777777643 457889987664322 111 01111
Q ss_pred CEEEEECCEEEEEecCCCeEEEEECCCCcEEEc-cc-CCCccCCCCCceE-EEE-EeCCEEEEEcCCCCCCCCcEEEE
Q 013797 328 PLIAVVNNELYSLETSSNELRVYLKDSNSWKNL-GL-VPVRADFNRGWGI-AFK-SLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 328 ~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v-~~-~p~~~~~~~~~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
..++...+..++.++..+.|.+||.++..-... .. ............+ .++ ..+++.++.|+.+ ..+.+|
T Consensus 260 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW 333 (340)
T 4aow_A 260 NALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVW 333 (340)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT----SCEEEE
T ss_pred EeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEE
Confidence 122333344455556678899999887643221 11 0000000011111 111 2356777778776 356677
No 158
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.27 E-value=3.4 Score=39.70 Aligned_cols=151 Identities=7% Similarity=-0.018 Sum_probs=85.5
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC-eEeC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS-WDSL 264 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~ 264 (436)
.++.||+... ....+.++|+.+++-..+.... .....+...-++.+|+...... ..++++|+.++. ...+
T Consensus 140 ~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~-~~~~ia~~~~g~~l~~~d~~~~------~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 140 GNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGF-KGGKPAVTKDKQRVYSIGWEGT------HTVYVYMKASGWAPTRI 210 (409)
T ss_dssp STTEEEEEET--TTTEEEEEETTTTEEEEEEETC-CBCBCEECTTSSEEEEEBSSTT------CEEEEEEGGGTTCEEEE
T ss_pred CCCCEEEEec--CCCcEEEEECCCCEEEEeeccC-CCCceeEecCCCcEEEEecCCC------ceEEEEEcCCCceeEEe
Confidence 4788999853 3468999999988765543221 1111111112456777754221 168889987543 2233
Q ss_pred CCCc--cCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCC-C-EEEEE--CCE
Q 013797 265 PGMR--QRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSP-P-LIAVV--NNE 336 (436)
Q Consensus 265 ~~~p--~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~-~-~~~~~--~g~ 336 (436)
.... ....-++.++. ++.||+... ...+++||+.+..-..+....... ..... . .+++. ++.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g---~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSG---SLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCS---CCCCSSCCEEEEETTTTE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccC---CCCCCccccEEEeCCCCE
Confidence 1111 11112233333 688999432 246899999888755542211100 01111 1 55555 589
Q ss_pred EEEEecCCCeEEEEECCCC
Q 013797 337 LYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~~~ 355 (436)
||+.....+.|++||++..
T Consensus 281 lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp EEEEETTTTEEEEECTTCC
T ss_pred EEEEeCCCCEEEEEecCCC
Confidence 9999877889999998765
No 159
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.18 E-value=4.2 Score=39.03 Aligned_cols=198 Identities=11% Similarity=-0.019 Sum_probs=104.4
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC-EEeCCCCC--
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN-WFKGPSMR-- 219 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~~p-- 219 (436)
.+|+.-.....+..+|+.++.-..+........ . +....++.||+.... ....++++++.++. ...+..+.
T Consensus 143 ~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--i---a~~~~g~~l~~~d~~-~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 143 TVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--P---AVTKDKQRVYSIGWE-GTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--C---EECTTSSEEEEEBSS-TTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--e---eEecCCCcEEEEecC-CCceEEEEEcCCCceeEEeeeccch
Confidence 355554455778899998766554432211111 1 122235567776432 12289999987654 23331111
Q ss_pred CCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC---CCccCCcc-e-eEEEE--CCEEEEEeccC
Q 013797 220 RPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP---GMRQRRKL-C-SGCYM--DNKFYVIGGRN 290 (436)
Q Consensus 220 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~---~~p~~r~~-~-~~~~~--~g~iyv~gG~~ 290 (436)
....-+.+++. ++.||+... ...+++||+.+..-..+. ........ . ..++. ++.||+...
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~-- 286 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ-- 286 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT--------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET--
T ss_pred hcCCcEEEEEeCCCCeEEEEEC--------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC--
Confidence 11111233332 688999432 136899999887755441 11111122 1 44554 589999864
Q ss_pred CCCCcCCEEEEEECCCCcEEEcC-CC-CCCC-C---C-CCCCCCCEEEEE-CCEEEEEec-CCCeEEEEECCCCcEEEcc
Q 013797 291 EKDKPLTCGEAYDEYAGTWYHIP-DI-LKDF-P---A-ETGKSPPLIAVV-NNELYSLET-SSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 291 ~~~~~~~~v~~yD~~~~~W~~v~-~~-~~~~-~---~-~~~r~~~~~~~~-~g~lyv~gg-~~~~i~~yd~~~~~W~~v~ 361 (436)
..+.|++||+... ...+. .. .... . . .......++++. +|.||+... ..+.|.++|+.++.-..+.
T Consensus 287 ----~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 287 ----NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp ----TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred ----CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 3457899998755 22221 11 0000 0 0 001112233333 578999987 7889999997777655553
No 160
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.15 E-value=3.2 Score=38.75 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=56.2
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC-CCCccC---CcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL-PGMRQR---RKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~---r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
++ +++.|+.+ ..+.+||..+.+-... ...... ......+.+ ++++++.|+.++ ....+.+||+
T Consensus 197 ~~-~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~~g~i~i~d~ 265 (397)
T 1sq9_A 197 RG-LIATGFNN-------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN---SFGCITLYET 265 (397)
T ss_dssp TS-EEEEECTT-------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET---TEEEEEEEET
T ss_pred Cc-eEEEEeCC-------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC---CCceEEEEEC
Confidence 45 66666543 3588999987653221 110000 111122222 566667766331 1146889998
Q ss_pred CCCcEEE-cCCCCCCCCCC---C-CCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCc
Q 013797 305 YAGTWYH-IPDILKDFPAE---T-GKSPPLIAVV--NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 305 ~~~~W~~-v~~~~~~~~~~---~-~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+.+-.. +.......... . .......+.. ++.+++.++..+.|.+||..+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 8764322 22100000000 0 1111112222 56777777778899999998764
No 161
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.14 E-value=2.6 Score=38.63 Aligned_cols=188 Identities=13% Similarity=-0.038 Sum_probs=97.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC---CcccEEEEe--CCEEEEEcCcCCCC----------CCccceE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP---RCLFASATC--GTFAFVAGGHGMDG----------SGVLNSA 251 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~----------~~~~~~~ 251 (436)
++.|||... ...+.++|+.+++.+.+...... .....+++- ++.||+........ ......+
T Consensus 91 ~g~l~v~d~---~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 91 NNQLYIVDC---YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTEEEEEET---TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCcEEEEEC---CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 688998732 13488999987765544321111 111223332 57899875321100 0012468
Q ss_pred EEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEeccCCCCCcCCEEEEEECCCC---cEEEcCCCCCCCCCCCCCC
Q 013797 252 ERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIGGRNEKDKPLTCGEAYDEYAG---TWYHIPDILKDFPAETGKS 326 (436)
Q Consensus 252 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~gG~~~~~~~~~~v~~yD~~~~---~W~~v~~~~~~~~~~~~r~ 326 (436)
++||+.+++.+.+.. ........++. ++ .||+... ..+.|.+||+... ....+..++ .
T Consensus 168 ~~~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~------~~~~I~~~~~~~~~~~~~~~~~~~~------g--- 230 (322)
T 2fp8_A 168 IKYDPSTKETTLLLK--ELHVPGGAEVSADSSFVLVAEF------LSHQIVKYWLEGPKKGTAEVLVKIP------N--- 230 (322)
T ss_dssp EEEETTTTEEEEEEE--EESCCCEEEECTTSSEEEEEEG------GGTEEEEEESSSTTTTCEEEEEECS------S---
T ss_pred EEEeCCCCEEEEecc--CCccCcceEECCCCCEEEEEeC------CCCeEEEEECCCCcCCccceEEeCC------C---
Confidence 999998877654311 00111122332 34 5888753 2357899998753 333332221 1
Q ss_pred CCEEEEE-CCEEEEEecC----------CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCC
Q 013797 327 PPLIAVV-NNELYSLETS----------SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSH 395 (436)
Q Consensus 327 ~~~~~~~-~g~lyv~gg~----------~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~ 395 (436)
...+++. +|.||+.... .+.|.+||++.+.-..+.. |.........++ +..+++|||.+...
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~--~~~~g~L~v~~~~~---- 303 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQI--QEHDGLLYIGTLFH---- 303 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEE--EEETTEEEEECSSC----
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEE--EEeCCEEEEeecCC----
Confidence 1123332 4789888643 3569999997655554432 221111122223 35689999876443
Q ss_pred CcEEEE
Q 013797 396 ESMAIY 401 (436)
Q Consensus 396 ~~~~~y 401 (436)
..+.+|
T Consensus 304 ~~i~~~ 309 (322)
T 2fp8_A 304 GSVGIL 309 (322)
T ss_dssp SEEEEE
T ss_pred CceEEE
Confidence 345555
No 162
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.06 E-value=3.3 Score=37.47 Aligned_cols=212 Identities=8% Similarity=0.048 Sum_probs=99.0
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEE-eCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWF-KGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~-~l~~~p~~r~~~~~~ 228 (436)
....+..||..+..-...-....... . ......++..++.|+. ...+.+||..+++-. .+... ...-.+++
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~~~~v--~--~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~h--~~~v~~~~ 104 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVTETPV--R--AGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEAH--PDYIRSIA 104 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCE--E--EEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEECC--SSCEEEEE
T ss_pred CCCcEEEEECCCCceeEEeeccCCcE--E--EEEEeCCCCEEEEECC--CCEEEEEECCCCcEEEEEeCC--CCcEEEEE
Confidence 35678888887765432111111100 0 0122334455555543 457899999887632 22111 11112222
Q ss_pred Ee-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 229 TC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 229 ~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
.. ++.+++.|+.++ .+.++|..++. .....+.........+.+ ++.+++.|+.+ ..+..||+
T Consensus 105 ~~~~~~~l~sgs~D~-------~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~ 170 (304)
T 2ynn_A 105 VHPTKPYVLSGSDDL-------TVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSL 170 (304)
T ss_dssp ECSSSSEEEEEETTS-------CEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEET
T ss_pred EcCCCCEEEEECCCC-------eEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEC
Confidence 22 455666665442 47788876542 111111111111122222 44667777643 45788888
Q ss_pred CCCc--EEEcCCCCCCCCCCCCCCCCEEEEE----CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEE
Q 013797 305 YAGT--WYHIPDILKDFPAETGKSPPLIAVV----NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFK 378 (436)
Q Consensus 305 ~~~~--W~~v~~~~~~~~~~~~r~~~~~~~~----~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~ 378 (436)
.+.. ....... . .....+.. ++.+++.|+..+.|.+||..+.+-.. .+.. .......++ .
T Consensus 171 ~~~~~~~~~~~~~--------~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~--~~~~--h~~~v~~~~-~ 236 (304)
T 2ynn_A 171 GQSTPNFTLTTGQ--------E-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA--TLEG--HMSNVSFAV-F 236 (304)
T ss_dssp TCSSCSEEEECCC--------T-TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEE--EEEC--CSSCEEEEE-E
T ss_pred CCCCccceeccCC--------c-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccce--eeCC--CCCCEEEEE-E
Confidence 6543 1111100 0 11111222 45677777778899999998764322 2211 001111122 1
Q ss_pred EeCCEEEEEcCCCCCCCCcEEEE
Q 013797 379 SLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 379 ~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
..++.+++.|+.+ ..+.+|
T Consensus 237 ~p~~~~l~s~s~D----g~i~iW 255 (304)
T 2ynn_A 237 HPTLPIIISGSED----GTLKIW 255 (304)
T ss_dssp CSSSSEEEEEETT----SCEEEE
T ss_pred CCCCCEEEEEcCC----CeEEEE
Confidence 3345677777776 356666
No 163
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.05 E-value=1.9 Score=39.49 Aligned_cols=175 Identities=11% Similarity=0.112 Sum_probs=87.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-C---CEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCCcc
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-G---THLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPRCL 224 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~---~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r~~ 224 (436)
...+..||..+++............. .++... + +.+++.|+. ...+.+||..+.+ -..+..... .-
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~--~v 114 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPI----KCGTFGATSLQQRYLATGDF--GGNLHIWNLEAPEMPVYSVKGHKE--II 114 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCE----EEEECTTCCTTTCCEEEEET--TSCEEEECTTSCSSCSEEECCCSS--CE
T ss_pred CcEEEEEeCCCCcccceeeecccCcE----EEEEEcCCCCCCceEEEecC--CCeEEEEeCCCCCccEEEEEeccc--ce
Confidence 56788888887765433221111000 011111 2 355555543 3468889988765 122221111 11
Q ss_pred cEEEE-------eCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCcc--CCcceeEE-----EECCEEEEEec
Q 013797 225 FASAT-------CGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQ--RRKLCSGC-----YMDNKFYVIGG 288 (436)
Q Consensus 225 ~~~~~-------~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~-----~~~g~iyv~gG 288 (436)
.++.. -++..++.|+.++ .+.+||..+.. ...+..... .+.-.+.+ .-++.+++.|+
T Consensus 115 ~~~~~~~~~~~s~~~~~l~~~~~d~-------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 115 NAIDGIGGLGIGEGAPEIVTGSRDG-------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp EEEEEESGGGCC-CCCEEEEEETTS-------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred EEEeeccccccCCCccEEEEEeCCC-------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 11111 2455566665432 47889988764 233322111 11111122 13677777776
Q ss_pred cCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE----CCEEEEEecCCCeEEEEECCC
Q 013797 289 RNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV----NNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 289 ~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~----~g~lyv~gg~~~~i~~yd~~~ 354 (436)
. ...+..||+.+.+-....... .....++.. ++..++.++..+.|.+||..+
T Consensus 188 ~------d~~i~i~d~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 188 D------NGDIKLFDLRNMALRWETNIK--------NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp T------TSEEEEEETTTTEEEEEEECS--------SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred c------CCeEEEEECccCceeeecCCC--------CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 3 346899999887643322211 111222332 567777777788999999865
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.01 E-value=2.8 Score=38.39 Aligned_cols=185 Identities=11% Similarity=-0.081 Sum_probs=87.7
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+.+-...- ..+.. ...++.. .++..++.++. ...+.+||..+++-...-.... ....+.
T Consensus 52 ~dg~i~vwd~~~~~~~~~~--~~h~~---~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~--~v~~~~ 122 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTL--DGHTG---TIWSIDVDCFTKYCVTGSA--DYSIKLWDVSNGQCVATWKSPV--PVKRVE 122 (369)
T ss_dssp SSSCEEEEETTTCCEEEEE--CCCSS---CEEEEEECTTSSEEEEEET--TTEEEEEETTTCCEEEEEECSS--CEEEEE
T ss_pred CCCEEEEEeCCCchhhhhh--hhcCC---cEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcEEEEeecCC--CeEEEE
Confidence 3456778888776543321 11111 0011222 24555555543 4579999998887543322211 112222
Q ss_pred Ee-CCEEEEEcCcCCCCCCccceEEEEeCCCCC----eEeCCCCcc-----CCc--ceeEEEE--CCEEEEEeccCCCCC
Q 013797 229 TC-GTFAFVAGGHGMDGSGVLNSAERYNPETKS----WDSLPGMRQ-----RRK--LCSGCYM--DNKFYVIGGRNEKDK 294 (436)
Q Consensus 229 ~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~----W~~~~~~p~-----~r~--~~~~~~~--~g~iyv~gG~~~~~~ 294 (436)
.. ++..++.++.+... ....+.+||..+.. +......+. ... ....+.+ +++++++|+.
T Consensus 123 ~~~~~~~l~~~~~~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 195 (369)
T 3zwl_B 123 FSPCGNYFLAILDNVMK--NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK----- 195 (369)
T ss_dssp ECTTSSEEEEEECCBTT--BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----
T ss_pred EccCCCEEEEecCCccC--CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----
Confidence 22 44555554433111 22457777766543 221111110 000 1112222 5566666653
Q ss_pred cCCEEEEEECCC-CcE-EEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEE
Q 013797 295 PLTCGEAYDEYA-GTW-YHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 295 ~~~~v~~yD~~~-~~W-~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
...+..||+.+ ..- ..+.... . ....++.. ++.+++.++..+.|.+||..+.+-..
T Consensus 196 -dg~i~i~d~~~~~~~~~~~~~~~------~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 196 -DGKISKYDVSNNYEYVDSIDLHE------K--SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp -TSEEEEEETTTTTEEEEEEECCS------S--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred -CCEEEEEECCCCcEeEEEEecCC------C--ceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 34689999987 332 2222111 0 11112222 56777777778899999998865443
No 165
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.96 E-value=3.6 Score=37.48 Aligned_cols=153 Identities=13% Similarity=0.011 Sum_probs=82.2
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
.++.||+.. .....++++|+..+. ...-..+ ..-+.++.. ++++|+...... ...+.+||+.+++.+.+
T Consensus 41 ~~g~lyv~d--~~~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~-----~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 41 PDGTIFVTN--HEVGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD-----SIPVVSLVKSDGTVETL 110 (306)
T ss_dssp TTSCEEEEE--TTTTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT-----SCEEEEEECTTSCEEEE
T ss_pred CCCCEEEEe--CCCCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC-----cceEEEEcCCCCeEEEE
Confidence 366788874 234579999987653 2211111 122333332 577888753211 12478899888887765
Q ss_pred CCCccCCcceeEE-EECCEEEEEeccCCCCCcCCEEEEEECCCCc---EEEcCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 013797 265 PGMRQRRKLCSGC-YMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT---WYHIPDILKDFPAETGKSPPLIAVVNNELYSL 340 (436)
Q Consensus 265 ~~~p~~r~~~~~~-~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~---W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~ 340 (436)
...+..+.....+ ..++.+|+... ....++++|+.++. |..-..+.............++...++.||+.
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~ 184 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS 184 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred EeCCCccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE
Confidence 4444333322333 23556777642 23478999987642 22111100000000111122343345689999
Q ss_pred ecCCCeEEEEECCC
Q 013797 341 ETSSNELRVYLKDS 354 (436)
Q Consensus 341 gg~~~~i~~yd~~~ 354 (436)
....+.|++||.+.
T Consensus 185 d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 185 NTEKMLLLRIPVDS 198 (306)
T ss_dssp ETTTTEEEEEEBCT
T ss_pred eCCCCEEEEEEeCC
Confidence 87788999999875
No 166
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.93 E-value=0.67 Score=43.57 Aligned_cols=146 Identities=8% Similarity=0.079 Sum_probs=68.6
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCC---CCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR---RPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p---~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++.+++ ++. ...+.+||..+++-....... ....-.+++.. +++.++.|+.++ .+.+||..+++-.
T Consensus 105 d~~~l~-~s~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-------~v~iwd~~~~~~~ 174 (357)
T 4g56_B 105 EKGILV-ASD--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-------SVKVWDLSQKAVL 174 (357)
T ss_dssp TTEEEE-EET--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-------CEEEEETTTTEEE
T ss_pred CCCEEE-EEC--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-------eEEEEECCCCcEE
Confidence 555554 332 346888998877543332211 11111122222 566667666543 4788999877543
Q ss_pred eCCCCccCCcceeEEEE--CC-EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE---CCE
Q 013797 263 SLPGMRQRRKLCSGCYM--DN-KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV---NNE 336 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~---~g~ 336 (436)
.. +.........+.+ ++ .+++.++.+ ..+..||+.+.+-....... ........+.. ++.
T Consensus 175 ~~--~~~h~~~v~~v~~s~~~~~~~~s~~~d------g~v~~wd~~~~~~~~~~~~~------~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 175 KS--YNAHSSEVNCVAACPGKDTIFLSCGED------GRILLWDTRKPKPATRIDFC------ASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp EE--ECCCSSCEEEEEECTTCSSCEEEEETT------SCEEECCTTSSSCBCBCCCT------TCCSCEEEEEECTTSTT
T ss_pred EE--EcCCCCCEEEEEEccCCCceeeeeccC------CceEEEECCCCceeeeeeec------cccccccchhhhhcccc
Confidence 22 1111111112222 33 366666643 34788898776532222111 11111122232 357
Q ss_pred EEEEecCCCeEEEEECCCCc
Q 013797 337 LYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~~~~ 356 (436)
+++.|+..+.|.+||..+.+
T Consensus 241 ~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp EEEEEESSSCEEEEESSCGG
T ss_pred eEEEeecccceeEEECCCCc
Confidence 78888778889999998753
No 167
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.87 E-value=2.2 Score=39.11 Aligned_cols=151 Identities=12% Similarity=0.125 Sum_probs=77.2
Q ss_pred EEEEEceec-CCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-C---CEEEEEcCcCCCCCCccceEEEEeCCCCC--e
Q 013797 189 HLIVSGNEI-EGGVIWRYELETNNWFKGPSMRRPRCLFASATC-G---TFAFVAGGHGMDGSGVLNSAERYNPETKS--W 261 (436)
Q Consensus 189 ~iyv~GG~~-~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W 261 (436)
.+++.|+.. ....+.+||..+++............-.+++.. + +.+++.|+.++ .+.+||..+.. -
T Consensus 32 ~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 32 KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG-------NLHIWNLEAPEMPV 104 (357)
T ss_dssp EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS-------CEEEECTTSCSSCS
T ss_pred eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC-------eEEEEeCCCCCccE
Confidence 555555431 245789999988876544322222111222222 2 36666665442 47888888765 1
Q ss_pred EeCCCCccCCcceeEEE-------ECCEEEEEeccCCCCCcCCEEEEEECCCCc--EEEcCCCCCCCCCCCCCCCCEEEE
Q 013797 262 DSLPGMRQRRKLCSGCY-------MDNKFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 262 ~~~~~~p~~r~~~~~~~-------~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~~~~~~~~~~~~r~~~~~~~ 332 (436)
..+...... -.+... -++.+.+.|+.+ ..+.+||+.+.. ...+...... ..+....++.
T Consensus 105 ~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~ 172 (357)
T 3i2n_A 105 YSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGE----NKRDCWTVAF 172 (357)
T ss_dssp EEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTS----CCCCEEEEEE
T ss_pred EEEEecccc--eEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCC----CCCceEEEEE
Confidence 111111111 011111 256666666643 357899988764 3333332210 0111111221
Q ss_pred -----ECCEEEEEecCCCeEEEEECCCCcEE
Q 013797 333 -----VNNELYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 333 -----~~g~lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
-++.+++.++..+.|.+||..+.+-.
T Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 173 GNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp ECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 36777888877789999999887643
No 168
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.83 E-value=0.66 Score=44.82 Aligned_cols=185 Identities=11% Similarity=0.035 Sum_probs=89.5
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP 221 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~ 221 (436)
+++.+.....+..||..+..-..+..+..+.. ...++.. .++.+++.|+. ...+.+||..++..+.+......
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~---~V~~l~f~p~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~ 208 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGG---SITGLKFNPLNTNQFYASSM--EGTTRLQDFKGNILRVFASSDTI 208 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSC---CCCEEEECSSCTTEEEEECS--SSCEEEEETTSCEEEEEECCSSC
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCC---CEEEEEEeCCCCCEEEEEeC--CCEEEEeeccCCceeEEeccCCC
Confidence 33333345677888887654332222111111 1112222 24555555543 34688899988766554332221
Q ss_pred Cc-ccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--C-CEEEEEeccCCCCCcC
Q 013797 222 RC-LFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--D-NKFYVIGGRNEKDKPL 296 (436)
Q Consensus 222 r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~-g~iyv~gG~~~~~~~~ 296 (436)
.. ..++.. -++.+++.|+.++ .+.++|..... +..+........++.+ + ..+++.|+.++
T Consensus 209 ~~~~~~~~~~~~~~~l~~g~~dg-------~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~----- 273 (435)
T 4e54_B 209 NIWFCSLDVSASSRMVVTGDNVG-------NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQ----- 273 (435)
T ss_dssp SCCCCCEEEETTTTEEEEECSSS-------BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTS-----
T ss_pred CccEEEEEECCCCCEEEEEeCCC-------cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCcc-----
Confidence 11 122222 2566777776543 47888886543 2222211112222333 3 34666666443
Q ss_pred CEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCE-EEEE--CCEEEEEecCCCeEEEEECCCC
Q 013797 297 TCGEAYDEYAGTWYHIPDILKDFPAETGKSPPL-IAVV--NNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 297 ~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~-~~~~--~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+.+||+.+.+-.. .+.. ...+.... .+.+ +|..++.++..+.|.+||..+.
T Consensus 274 -~v~iwd~~~~~~~~--~~~~----~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 274 -TVKIWDLRQVRGKA--SFLY----SLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp -BCCEEETTTCCSSS--CCSB----CCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred -eeeEEecccccccc--eEEE----eeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 45778877654211 1110 01111111 1111 5677777777889999998764
No 169
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.78 E-value=1.9 Score=41.24 Aligned_cols=145 Identities=11% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.+++.|+. ...+.+||..+++-... +.........+.+ ++.+++.|+.++ .+.+||..+..-..
T Consensus 119 ~~~~l~s~s~--Dg~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~-------~i~iwd~~~~~~~~- 186 (410)
T 1vyh_C 119 VFSVMVSASE--DATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADM-------TIKLWDFQGFECIR- 186 (410)
T ss_dssp SSSEEEEEES--SSCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTS-------CCCEEETTSSCEEE-
T ss_pred CCCEEEEEeC--CCeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCceeE-
Confidence 4455666653 34688999888753221 1111111122222 566777776553 36678887654322
Q ss_pred CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEc-CCCCCCCCCCCCCCCCEEEEE--CCEEEE
Q 013797 265 PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHI-PDILKDFPAETGKSPPLIAVV--NNELYS 339 (436)
Q Consensus 265 ~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v-~~~~~~~~~~~~r~~~~~~~~--~g~lyv 339 (436)
.+........++.+ ++..++.|+.+ ..+..||+.++.-... .... .....+.. ++.+++
T Consensus 187 -~~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~---------~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 187 -TMHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHR---------EWVRMVRPNQDGTLIA 250 (410)
T ss_dssp -CCCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECCS---------SCEEEEEECTTSSEEE
T ss_pred -EEcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCC---------ccEEEEEECCCCCEEE
Confidence 12111111122222 56666777643 4688999987753221 1110 11111222 567788
Q ss_pred EecCCCeEEEEECCCCcEEE
Q 013797 340 LETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~W~~ 359 (436)
.|+..+.|.+||..+.....
T Consensus 251 s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp EEETTSCEEEEETTTCCEEE
T ss_pred EEcCCCeEEEEECCCCceee
Confidence 88878899999998875443
No 170
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.73 E-value=4.4 Score=37.70 Aligned_cols=171 Identities=11% Similarity=0.042 Sum_probs=86.5
Q ss_pred CCeEEEEECCCCCEEeCCCCCCCCcccEEEEe----CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce
Q 013797 199 GGVIWRYELETNNWFKGPSMRRPRCLFASATC----GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC 274 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 274 (436)
...+.+||..+++-...- ........+..+ ++..++.|+.++ .+.+||..+.+....-. ......
T Consensus 175 D~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-------~v~~wd~~~~~~~~~~~--~h~~~v 243 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGGCDK-------KAMVWDMRSGQCVQAFE--THESDV 243 (354)
T ss_dssp TSEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEETTS-------CEEEEETTTCCEEEEEC--CCSSCE
T ss_pred CCcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEeCCC-------eEEEEECCCCcEEEEec--CCCCCe
Confidence 357899999887643211 111111111112 346677776543 48889998876533211 111111
Q ss_pred eEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEE
Q 013797 275 SGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVY 350 (436)
Q Consensus 275 ~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~y 350 (436)
.++.+ ++.+++.|+.+ ..+..||+.++.-..+-... ........+.+ ++.+++.|+..+.|.+|
T Consensus 244 ~~v~~~p~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~~------~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 244 NSVRYYPSGDAFASGSDD------ATCRLYDLRADREVAIYSKE------SIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCT------TCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEcCC------CcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 22222 56677777744 34788998876432221111 11111222222 57788888778899999
Q ss_pred ECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 351 LKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 351 d~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
|..+.+= +..+.. .......+++ ..+++.++.|+.++ .+.+|
T Consensus 312 d~~~~~~--~~~l~~--h~~~v~~l~~-spdg~~l~sgs~D~----~v~vW 353 (354)
T 2pbi_B 312 DVLKGSR--VSILFG--HENRVSTLRV-SPDGTAFCSGSWDH----TLRVW 353 (354)
T ss_dssp ETTTCSE--EEEECC--CSSCEEEEEE-CTTSSCEEEEETTS----EEEEE
T ss_pred ECCCCce--EEEEEC--CCCcEEEEEE-CCCCCEEEEEcCCC----CEEec
Confidence 9876542 222211 1111111221 34567777777663 45555
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.70 E-value=2.3 Score=43.34 Aligned_cols=186 Identities=12% Similarity=0.001 Sum_probs=101.7
Q ss_pred CeEEEEecCC------CCeEeCC-CCCCCCCccCCCeeeEEeCC-EEEEEceec-----CCCeEEEEECC-CC---CEEe
Q 013797 152 SSWWAFDRHF------QTRRKLP-ELPSDPCFKLGDKESLCAGT-HLIVSGNEI-----EGGVIWRYELE-TN---NWFK 214 (436)
Q Consensus 152 ~~~~~~dp~~------~~W~~l~-~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~-----~~~~v~~ydp~-t~---~W~~ 214 (436)
..++.+|..+ +....+. .-. .... ....+-+| .|++..... ....++++|.. ++ +.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~---~~~~--~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH---RFVT--GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS---SEEC--CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC---Cccc--CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 4678888887 5555554 211 1111 01233455 444443222 12589999998 56 3444
Q ss_pred CCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCc-------ceeEEEE-CCEEEE
Q 013797 215 GPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRK-------LCSGCYM-DNKFYV 285 (436)
Q Consensus 215 l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-------~~~~~~~-~g~iyv 285 (436)
+..-. .......+.. ++++|+.+..++ ...++++|+.+++++.+........ ....+.. ++++++
T Consensus 236 l~~~~-~~~~~~~~~spdg~l~~~~~~~~-----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 236 LLGGP-EEAIAQAEWAPDGSLIVATDRTG-----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEET-TBCEEEEEECTTSCEEEEECTTS-----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred eCCCC-CceEcceEECCCCeEEEEECCCC-----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 32211 1111222222 677777765432 2369999998999988744321110 1123333 677777
Q ss_pred EeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEE-EEECCEEEEEecCC---CeEEEEECCCCcEEEcc
Q 013797 286 IGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLI-AVVNNELYSLETSS---NELRVYLKDSNSWKNLG 361 (436)
Q Consensus 286 ~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~-~~~~g~lyv~gg~~---~~i~~yd~~~~~W~~v~ 361 (436)
.+.. + ...++.+|+.++....+.... . ....+ ...++.+++..+.. ..++.+|.++++.+.+.
T Consensus 310 ~~~~-~----~~~l~~~d~~~~~~~~l~~~~------~--~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 310 VHGK-G----AAVLGILDPESGELVDAAGPW------T--EWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEBS-S----SCEEEEEETTTTEEEECCSSC------C--EEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEc-C----ccEEEEEECCCCcEEEecCCC------C--eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 7653 2 356788899888877665321 1 11122 33456666665432 36899999888887774
No 172
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.68 E-value=3.1 Score=39.37 Aligned_cols=221 Identities=13% Similarity=0.056 Sum_probs=99.7
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+.+-... +..+.. ...++. ..++..++.|+. ...+.+||..+++....-... ....+++
T Consensus 143 ~d~~i~iwd~~~~~~~~~--~~~h~~---~v~~~~~~p~~~~l~s~s~--d~~v~iwd~~~~~~~~~~~~~--~~v~~~~ 213 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMI--LQGHEQ---DIYSLDYFPSGDKLVSGSG--DRTVRIWDLRTGQCSLTLSIE--DGVTTVA 213 (393)
T ss_dssp TTSCEEEEETTTTEEEEE--ECCCSS---CEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEECS--SCEEEEE
T ss_pred CCCeEEEEECCCCcEEEE--EccCCC---CEEEEEEcCCCCEEEEecC--CCcEEEEECCCCeeEEEEEcC--CCcEEEE
Confidence 456778888877654322 111110 001112 124444455542 357889999887654322111 1112222
Q ss_pred Ee--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCCCc---cCCc-ceeEEEE--CCEEEEEeccCCCCCcCCEE
Q 013797 229 TC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPGMR---QRRK-LCSGCYM--DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 229 ~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~p---~~r~-~~~~~~~--~g~iyv~gG~~~~~~~~~~v 299 (436)
.. ++.+++.|+.++ .+.+||..++.-.. +.... .... ....+.+ ++++.+.|+.+ ..+
T Consensus 214 ~~~~~~~~l~~~s~d~-------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d------~~v 280 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDR-------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD------RSV 280 (393)
T ss_dssp ECSTTCCEEEEEETTS-------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT------SEE
T ss_pred EECCCCCEEEEEcCCC-------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC------CEE
Confidence 22 566777776543 47889988776432 21110 1111 1112222 56666777643 457
Q ss_pred EEEECCCCcEEEcCCCCCCCC---CCCCCCCC--EEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCc
Q 013797 300 EAYDEYAGTWYHIPDILKDFP---AETGKSPP--LIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGW 373 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~---~~~~r~~~--~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~ 373 (436)
..||+.+..-......+.... ....+... .++.. ++..++.|+..+.|.+||..+.+-... +.. ....
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~--l~~----h~~~ 354 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM--LQG----HRNS 354 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE--EEC----CSSC
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEE--ECC----CCCC
Confidence 888876543211100000000 00001111 11111 456666777788999999987643221 111 1111
Q ss_pred eEEEEEe-------CCEEEEEcCCCCCCCCcEEEEe
Q 013797 374 GIAFKSL-------GNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 374 ~~~~~~~-------~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
-..++.. ++.+++.|+.+ ..+.+|.
T Consensus 355 v~~v~~~~~~~~~p~~~~l~sgs~D----g~i~iW~ 386 (393)
T 1erj_A 355 VISVAVANGSSLGPEYNVFATGSGD----CKARIWK 386 (393)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETT----SEEEEEE
T ss_pred EEEEEecCCcCcCCCCCEEEEECCC----CcEEECc
Confidence 1122122 36788888877 4667773
No 173
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.63 E-value=1.1 Score=46.50 Aligned_cols=203 Identities=9% Similarity=-0.011 Sum_probs=105.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCC----CEEeCC--CCCCCC
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETN----NWFKGP--SMRRPR 222 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~----~W~~l~--~~p~~r 222 (436)
...+..+++.......+...... .. +++. .++.||+... ....++++++.+. .-..+- .+..|
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~---p~---gla~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P- 455 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRN---VV---ALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAP- 455 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTT---CC---CCEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC--C-
T ss_pred ccceEEEeCCCCcceeeeccCcc---eE---EEccccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCCCCc-
Confidence 34666777777666554332211 11 1233 3688998742 2357889998751 111111 11112
Q ss_pred cccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC--CccCCcceeEEE--ECCEEEEEeccCCCCCcC
Q 013797 223 CLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG--MRQRRKLCSGCY--MDNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 223 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~ 296 (436)
..+++ .++.||+.-.. ...|.++|+....-+.+.. +..++ +.++ .++.||+..-. ..
T Consensus 456 --~glavD~~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~-----~~ 518 (699)
T 1n7d_A 456 --DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG-----TP 518 (699)
T ss_dssp --CCEECCCSSSBCEECCTT-------TSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS-----SS
T ss_pred --ceEEEEeeCCcEEEEecc-------CCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC-----CC
Confidence 22333 46789987432 2358889987665444322 22222 2333 26788886521 12
Q ss_pred CEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCce
Q 013797 297 TCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWG 374 (436)
Q Consensus 297 ~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~ 374 (436)
..|+++++....-..+.... .....++++- +++||+.....+.|+++|+....-+.+...+. ......+
T Consensus 519 ~~I~~~~~dG~~~~~l~~~~-------l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~--~~~~P~g 589 (699)
T 1n7d_A 519 AKIKKGGLNGVDIYSLVTEN-------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK--RLAHPFS 589 (699)
T ss_dssp CCEEBCCSSSCCCCEESCSS-------CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS--SCSSCCC
T ss_pred CeEEEEeCCCCCeeEEEeCC-------CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCC--cCCCceE
Confidence 46788877644332222111 0111234443 57999998878899999997654444432211 1112234
Q ss_pred EEEEEeCCEEEEEcCC
Q 013797 375 IAFKSLGNELLVIGAS 390 (436)
Q Consensus 375 ~~~~~~~~~l~v~GG~ 390 (436)
++ ..++.||+.-..
T Consensus 590 la--vd~~~lywtd~~ 603 (699)
T 1n7d_A 590 LA--VFEDKVFWTDII 603 (699)
T ss_dssp CE--EETTEEEEECST
T ss_pred eE--EECCEEEEEeCC
Confidence 44 567889988643
No 174
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.62 E-value=0.6 Score=42.91 Aligned_cols=162 Identities=6% Similarity=0.018 Sum_probs=78.2
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe----CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC----GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 262 (436)
++..++.|+. ...+.+||..+++...+..+.........+.+ ++.+++.|+.++ .+.++|..++.|.
T Consensus 24 ~g~~lasgs~--D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-------~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 24 YGTRLATCSS--DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR-------KVIIWREENGTWE 94 (316)
T ss_dssp GGCEEEEEET--TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS-------CEEEECCSSSCCC
T ss_pred CCCEEEEEeC--CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC-------EEEEEECCCCcce
Confidence 4455555542 35678888777654333222211111222222 255666666442 4788999887765
Q ss_pred eCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCCC-cEEEcCCCCCCCC-CCC----CCCCCE-EE
Q 013797 263 SLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYAG-TWYHIPDILKDFP-AET----GKSPPL-IA 331 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~~-~W~~v~~~~~~~~-~~~----~r~~~~-~~ 331 (436)
.+..+.........+.+ + +.+++.|+.+ ..+..||..++ .|.....+..... ... +..... +.
T Consensus 95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp EEEEECCCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred EEEEccCCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 43222111111122222 2 5566777644 34677887765 5754332221000 000 000000 00
Q ss_pred -------EECCEEEEEecCCCeEEEEECCC-CcEEEcccC
Q 013797 332 -------VVNNELYSLETSSNELRVYLKDS-NSWKNLGLV 363 (436)
Q Consensus 332 -------~~~g~lyv~gg~~~~i~~yd~~~-~~W~~v~~~ 363 (436)
...+++++.|+..+.|.+||..+ +.|+.+..+
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 00135667777778899999874 467766544
No 175
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.50 E-value=0.98 Score=41.86 Aligned_cols=143 Identities=10% Similarity=-0.046 Sum_probs=78.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
++.+|+++.. ...+++||+.+++.+.+.. + ....+++. -++.+++... ..+.+||+.+++.+.+.
T Consensus 60 ~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~-~--~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 60 SGTAWWFNIL--ERELHELHLASGRKTVHAL-P--FMGSALAKISDSKQLIASD---------DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp TTEEEEEEGG--GTEEEEEETTTTEEEEEEC-S--SCEEEEEEEETTEEEEEET---------TEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECC--CCEEEEEECCCCcEEEEEC-C--CcceEEEEeCCCeEEEEEC---------CCEEEEECCCCcEEEEe
Confidence 4678877532 3579999999887654421 2 11122222 3678877641 23889999999887653
Q ss_pred CCccCC--cceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEE
Q 013797 266 GMRQRR--KLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYS 339 (436)
Q Consensus 266 ~~p~~r--~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv 339 (436)
..+... .......+ +|++|+.............++.|| +++...+.... . ...+++.. ++ .||+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-------~-~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-------S-IPNSICFSPDGTTGYF 195 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-------S-SEEEEEECTTSCEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-------c-ccCCeEEcCCCCEEEE
Confidence 322111 11112222 677877532111111235688898 46655442110 0 11123333 44 6888
Q ss_pred EecCCCeEEEEECC
Q 013797 340 LETSSNELRVYLKD 353 (436)
Q Consensus 340 ~gg~~~~i~~yd~~ 353 (436)
.....+.|++||.+
T Consensus 196 ~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 196 VDTKVNRLMRVPLD 209 (326)
T ss_dssp EETTTCEEEEEEBC
T ss_pred EECCCCEEEEEEcc
Confidence 87666789999975
No 176
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.50 E-value=2.9 Score=39.00 Aligned_cols=153 Identities=7% Similarity=0.025 Sum_probs=73.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.+++.|+. ...+.+||..+.+-...-..+.+......... ++.+++.|+.++ .+.+||..+..-...
T Consensus 111 ~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 111 DTGMFTSSSF--DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-------KVQLCDLKSGSCSHI 181 (408)
T ss_dssp CTTCEEEEET--TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-------SEEEEESSSSCCCEE
T ss_pred CCcEEEEEeC--CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-------eEEEEeCCCcceeee
Confidence 4445555542 35789999988775443332222111111111 334666665432 478899876642211
Q ss_pred CCCccCCcceeEE-EE-CCE-EEEEeccCCCCCcCCEEEEEECCCCc--EEEcCCCCCC-----CCC-CCCCCCCEEEEE
Q 013797 265 PGMRQRRKLCSGC-YM-DNK-FYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIPDILKD-----FPA-ETGKSPPLIAVV 333 (436)
Q Consensus 265 ~~~p~~r~~~~~~-~~-~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~~~~~~-----~~~-~~~r~~~~~~~~ 333 (436)
+.........+ .. ++. +++.|+.+ ..+..||+.+.. ...+...... ... .........+..
T Consensus 182 --~~~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 182 --LQGHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp --ECCCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred --ecCCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 11111111222 22 333 66677643 347889987653 2222110000 000 011111112222
Q ss_pred --CCEEEEEecCCCeEEEEECCCCc
Q 013797 334 --NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 334 --~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
++..++.++..+.+.+||..+.+
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCc
Confidence 56677777778899999998754
No 177
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.49 E-value=7.8 Score=39.86 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=72.8
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCC--------CcccEEEEeCCEEEEEcCcCCCCCCccceEE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRP--------RCLFASATCGTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
-+..++.||+... ...++.+|..|++ |+.-...+.. ......++.+++||+... ...+.
T Consensus 62 P~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------dg~l~ 130 (668)
T 1kv9_A 62 PLFHDGVIYTSMS---WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--------DGRLI 130 (668)
T ss_dssp CEEETTEEEEEEG---GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------TSEEE
T ss_pred CEEECCEEEEECC---CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------CCEEE
Confidence 3567999998754 3478999998887 8875443211 011234556888888642 13588
Q ss_pred EEeCCCCC--eEeCCCCcc--CCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEc
Q 013797 253 RYNPETKS--WDSLPGMRQ--RRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHI 312 (436)
Q Consensus 253 ~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v 312 (436)
.+|..|++ |+.-..-+. .....+.++.++++|+..+....+ ....+.+||..++ .|+.-
T Consensus 131 alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~-~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG-VRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTC-CBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcC-CCCEEEEEECCCCcEEEEec
Confidence 99998886 875422111 112234456799988753321111 3457999999887 48763
No 178
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.46 E-value=5.1 Score=37.61 Aligned_cols=180 Identities=12% Similarity=0.090 Sum_probs=90.8
Q ss_pred CCeEEEEECCCCCEEeCC--CCCCCCc-ccEEEE---eCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCccC
Q 013797 199 GGVIWRYELETNNWFKGP--SMRRPRC-LFASAT---CGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQR 270 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~~l~--~~p~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~ 270 (436)
...+.+||..+++-...- ..+.... ...... .++.+++.|+.++ .+.+||..... -..+.. .
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-------~v~~wd~~~~~~~~~~~~~---h 248 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-------TVRLWDLRITSRAVRTYHG---H 248 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-------CEEEEETTTTCCCCEEECC---C
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-------eEEEEECCCCCcceEEECC---c
Confidence 357889999888754321 2221111 111222 2567777777553 47889986321 111111 0
Q ss_pred CcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCC-CCCCCCCCCCCCCEEE-EECCEEEEEecCCCe
Q 013797 271 RKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDI-LKDFPAETGKSPPLIA-VVNNELYSLETSSNE 346 (436)
Q Consensus 271 r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~-~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~~~ 346 (436)
......+.+ +++.++.|+.+ ..+..||+.++.-...-.. +.......+ ....++ ..+|++++.|+..+.
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELP-IVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSC-SCSEEEECSSSSEEEEECTTSC
T ss_pred CCCeEEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccC-ceEEEEECCCCCEEEEEECCCC
Confidence 111112222 56777777744 3478899988754332111 100000000 112222 236788888888889
Q ss_pred EEEEECCCCcEEE-cccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 347 LRVYLKDSNSWKN-LGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 347 i~~yd~~~~~W~~-v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
|.+||..+.+-.. +..+... ....-..+++ ..++..++.|+.+ ..+.+|
T Consensus 322 i~vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~-s~dg~~l~sgs~D----~~i~iW 371 (380)
T 3iz6_a 322 CYVWDTLLAEMVLNLGTLQNS-HEGRISCLGL-SSDGSALCTGSWD----KNLKIW 371 (380)
T ss_dssp EEEEETTTCCEEEEECCSCSS-CCCCCCEEEE-CSSSSEEEEECTT----SCEEEE
T ss_pred EEEEECCCCceEEEEecccCC-CCCceEEEEE-CCCCCEEEEeeCC----CCEEEE
Confidence 9999987765432 2222111 1111122222 3467778888877 467777
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.35 E-value=1.5 Score=41.16 Aligned_cols=158 Identities=8% Similarity=-0.097 Sum_probs=75.3
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY 278 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~ 278 (436)
..++++|+.+++-+.+...+. ...+....- +++.+++...... ......++.+|..+...+.+............+.
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~-~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPH-DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCT-TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCC-CCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 579999999988666543221 111222222 3443332222111 1124578999998877666644221111111122
Q ss_pred -ECCE-EEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEe--------cCCCeEE
Q 013797 279 -MDNK-FYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLE--------TSSNELR 348 (436)
Q Consensus 279 -~~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~g--------g~~~~i~ 348 (436)
-+|+ |+.+....+. ....++.+|+.+++-..+...+..........+....-.+..|++.. .....|+
T Consensus 246 spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGS--PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp CTTSSCEEEEEEETTC--CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred CCCCCEEEEEecCCCC--CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 2555 5443322211 12358999999988766654431000000011112222233343321 2345899
Q ss_pred EEECCCCcEEEcc
Q 013797 349 VYLKDSNSWKNLG 361 (436)
Q Consensus 349 ~yd~~~~~W~~v~ 361 (436)
++|+++++-+.+.
T Consensus 324 ~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 324 VFNMKNGTQHRVA 336 (388)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeccCCceEEec
Confidence 9999998777664
No 180
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.31 E-value=4.8 Score=36.82 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=50.3
Q ss_pred EEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe--CCEEEEEceecCCCeEEEEECCCCCEEeC-CCCCCC
Q 013797 145 FMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA--GTHLIVSGNEIEGGVIWRYELETNNWFKG-PSMRRP 221 (436)
Q Consensus 145 ~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~v~~ydp~t~~W~~l-~~~p~~ 221 (436)
++.......+..||..+.+-.... .... ....++... ++.+++.|+. ...+.+||..+++-... ..+...
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~~--~~~~---~~i~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~ 160 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKHY--VGHG---NAINELKFHPRDPNLLLSVSK--DHALRLWNIQTDTLVAIFGGVEGH 160 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEEE--ESCC---SCEEEEEECSSCTTEEEEEET--TSCEEEEETTTTEEEEEECSTTSC
T ss_pred EEEecCCCEEEEEEchhceEeeee--cCCC---CcEEEEEECCCCCCEEEEEeC--CCeEEEEEeecCeEEEEecccccc
Confidence 333334567888888766543211 1110 000112221 4556666653 35689999988764332 221222
Q ss_pred CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC
Q 013797 222 RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS 260 (436)
Q Consensus 222 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 260 (436)
......+.+ ++..++.|+.++ .+.+||..+.+
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~ 194 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMDH-------SLKLWRINSKR 194 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS-------CEEEEESCSHH
T ss_pred cCceeEEEECCCCCEEEEecCCC-------CEEEEECCCCc
Confidence 222222222 455666665432 47888887653
No 181
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.26 E-value=0.52 Score=45.56 Aligned_cols=144 Identities=8% Similarity=-0.003 Sum_probs=74.5
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEeCCCC-CCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFKGPSM-RRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~-p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
+.+++.|+. ...+.+||..+++-..+-.+ .+...-.+++. .++.+++.|+.++ .+.++|..++.-..+
T Consensus 132 ~~~lasGs~--dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-------~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 132 PSTVAVGSK--GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-------TTRLQDFKGNILRVF 202 (435)
T ss_dssp TTCEEEEET--TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-------CEEEEETTSCEEEEE
T ss_pred CCEEEEEeC--CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-------EEEEeeccCCceeEE
Confidence 345555543 24578888877653322222 12222223333 2456666666543 478889887765544
Q ss_pred CCCccC-CcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C-CEEEE
Q 013797 265 PGMRQR-RKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N-NELYS 339 (436)
Q Consensus 265 ~~~p~~-r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~-g~lyv 339 (436)
...... ....+..+ -++++++.|+.+ ..+..||+.... +..+. ........+.+ + ..+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~---~~~~~------~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKE---LWNLR------MHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCB---CCCSB------CCSSCEEEEEECTTCSSEEE
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcce---eEEEe------cccceEEeeeecCCCceEEE
Confidence 222111 11122222 367777777643 357889986543 22221 11111112222 2 34677
Q ss_pred EecCCCeEEEEECCCC
Q 013797 340 LETSSNELRVYLKDSN 355 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~ 355 (436)
.|+..+.|.+||..+.
T Consensus 268 s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 268 TASVDQTVKIWDLRQV 283 (435)
T ss_dssp EEETTSBCCEEETTTC
T ss_pred EecCcceeeEEecccc
Confidence 7777788999998764
No 182
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.26 E-value=2.4 Score=39.62 Aligned_cols=136 Identities=9% Similarity=0.039 Sum_probs=68.2
Q ss_pred CCeEEEEECCCCCEEeCCC--C-CCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcce
Q 013797 199 GGVIWRYELETNNWFKGPS--M-RRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLC 274 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~~l~~--~-p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~ 274 (436)
...+.+||..+++-..... + .+...-.+++.. +++.++.|+.++ .+.++|..+++-... +.......
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-------~i~iwd~~~~~~~~~--~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-------CIKVWDLAQQVVLSS--YRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-------eEEEEECCCCcEEEE--EcCcCCce
Confidence 3578899988775221111 0 011111122222 566667666543 488899987753221 11111111
Q ss_pred eEEEE--CC-EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE---CCEEEEEecCCCeEE
Q 013797 275 SGCYM--DN-KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV---NNELYSLETSSNELR 348 (436)
Q Consensus 275 ~~~~~--~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~~~~i~ 348 (436)
..+.+ ++ .+++.|+.+ ..+..||+.+.+-...-... ........+.. ++++++.|+..+.|.
T Consensus 173 ~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSED------NRILLWDTRCPKPASQIGCS------APGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECSSCTTEEEEEETT------SCEEEEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEecCCCCCceeeeccc------cccccccccccceeeeeecc------eeeccceeeeecCCCCcceEEeccCCcEE
Confidence 12222 33 466667644 34788999877543321111 01011112222 457888888788999
Q ss_pred EEECCCC
Q 013797 349 VYLKDSN 355 (436)
Q Consensus 349 ~yd~~~~ 355 (436)
+||..+.
T Consensus 241 ~wd~~~~ 247 (344)
T 4gqb_B 241 LVDTKST 247 (344)
T ss_dssp EEESCC-
T ss_pred EEECCCC
Confidence 9999865
No 183
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=93.16 E-value=3.8 Score=38.12 Aligned_cols=216 Identities=11% Similarity=0.082 Sum_probs=100.0
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCC----CCCCCCccc
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGP----SMRRPRCLF 225 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~----~~p~~r~~~ 225 (436)
....+..||..+.........+... ........++..++.||. ...+.+|+.....-.... .+.......
T Consensus 84 ~Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~lasg~~--d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v 157 (354)
T 2pbi_B 84 QDGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAIACGGL--DNKCSVYPLTFDKNENMAAKKKSVAMHTNYL 157 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEEEEEST--TSEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred CCCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEEEEeeC--CCCEEEEEEeccccccccccceeeeccCCcE
Confidence 3456777887665543322222111 111122335566666654 346777776543210000 000001111
Q ss_pred EEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE----CCEEEEEeccCCCCCcCCEE
Q 013797 226 ASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM----DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 226 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~g~iyv~gG~~~~~~~~~~v 299 (436)
..+.+ ++..++.|+.+ ..+.++|..+++-... +........++.+ ++.+++.|+.+ ..+
T Consensus 158 ~~~~~~~~~~~l~t~s~D-------~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D------g~v 222 (354)
T 2pbi_B 158 SACSFTNSDMQILTASGD-------GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD------KKA 222 (354)
T ss_dssp EEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT------SCE
T ss_pred EEEEEeCCCCEEEEEeCC-------CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC------CeE
Confidence 12222 34344444433 3588899988764321 1100011111112 35677777744 357
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEE
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAF 377 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~ 377 (436)
..||+.+++....-... ......+.+ ++.+++.|+..+.|.+||..++.-..+ +... ..........
T Consensus 223 ~~wd~~~~~~~~~~~~h--------~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~--~~~~-~~~~~~~~~~ 291 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETH--------ESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI--YSKE-SIIFGASSVD 291 (354)
T ss_dssp EEEETTTCCEEEEECCC--------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECCT-TCCSCEEEEE
T ss_pred EEEECCCCcEEEEecCC--------CCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE--EcCC-CcccceeEEE
Confidence 89999887653321111 011112222 567777888788999999987643222 1110 0011111111
Q ss_pred EEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 378 KSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 378 ~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
...++++++.|+.+ ..+.+|
T Consensus 292 ~s~~g~~l~~g~~d----~~i~vw 311 (354)
T 2pbi_B 292 FSLSGRLLFAGYND----YTINVW 311 (354)
T ss_dssp ECTTSSEEEEEETT----SCEEEE
T ss_pred EeCCCCEEEEEECC----CcEEEE
Confidence 13457777777765 356666
No 184
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.14 E-value=5 Score=36.64 Aligned_cols=104 Identities=10% Similarity=0.020 Sum_probs=54.7
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
+.+++.|+. ...+.+||..+++-.. +... ...-.++... ++.+++.|+.++ .+.+||..+++-...
T Consensus 85 ~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 85 HPLLAVAGS--RGIIRIINPITMQCIKHYVGH--GNAINELKFHPRDPNLLLSVSKDH-------ALRLWNIQTDTLVAI 153 (366)
T ss_dssp CEEEEEEET--TCEEEEECTTTCCEEEEEESC--CSCEEEEEECSSCTTEEEEEETTS-------CEEEEETTTTEEEEE
T ss_pred CCEEEEecC--CCEEEEEEchhceEeeeecCC--CCcEEEEEECCCCCCEEEEEeCCC-------eEEEEEeecCeEEEE
Confidence 566666653 3579999988776322 2111 1111222222 556677766542 488899987764322
Q ss_pred -CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCc
Q 013797 265 -PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGT 308 (436)
Q Consensus 265 -~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~ 308 (436)
..+.........+.+ ++...+.|+.+ ..+.+||+.+.+
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~ 194 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMD------HSLKLWRINSKR 194 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETT------SCEEEEESCSHH
T ss_pred ecccccccCceeEEEECCCCCEEEEecCC------CCEEEEECCCCc
Confidence 111111112222222 45666666643 357889987653
No 185
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.12 E-value=2.4 Score=38.70 Aligned_cols=109 Identities=13% Similarity=0.127 Sum_probs=52.8
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCC---CccCCCeeeEEe-CCEEEEEcee---------cCCCeEEEEECC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDP---CFKLGDKESLCA-GTHLIVSGNE---------IEGGVIWRYELE 208 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~---~~~~~~~~~~~~-~~~iyv~GG~---------~~~~~v~~ydp~ 208 (436)
..+++.......++.||+.+.+-......+... ..... .....- +..+|+.+.. .....+++||+.
T Consensus 55 ~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 55 RTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred CEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEcccccccccccccCCCeEEEEECC
Confidence 345555445677889999887654322222110 00000 012222 4466665522 113589999998
Q ss_pred CCCEEe-CCCCCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 209 TNNWFK-GPSMRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 209 t~~W~~-l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
+++-.+ +.....++...+++. -++++|+.++ ++.++|+.+.+-
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~----------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 134 DGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGP----------DIYKMDVKTGKY 178 (349)
T ss_dssp GGGGBCCSEEEECCSSCCCEEECTTSCEEEESS----------SEEEECTTTCCE
T ss_pred CccccceeeeccCCCcccceeECCCCcEEEccC----------cEEEEeCCCCce
Confidence 754211 111122222222322 2566777432 277788877654
No 186
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.11 E-value=1.7 Score=39.41 Aligned_cols=177 Identities=10% Similarity=0.068 Sum_probs=84.2
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+++-... +..+.. ...+++ ..++.+++.|+. ...+.+||..++.=. ...+........++
T Consensus 75 ~d~~i~vwd~~~~~~~~~--~~~h~~---~v~~~~~~~~~~~l~sgs~--D~~v~lWd~~~~~~~-~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVD--FEAHPD---YIRSIAVHPTKPYVLSGSD--DLTVKLWNWENNWAL-EQTFEGHEHFVMCV 146 (304)
T ss_dssp TTSEEEEEETTTCCEEEE--EECCSS---CEEEEEECSSSSEEEEEET--TSCEEEEEGGGTTEE-EEEECCCCSCEEEE
T ss_pred CCCEEEEEECCCCcEEEE--EeCCCC---cEEEEEEcCCCCEEEEECC--CCeEEEEECCCCcch-hhhhcccCCcEEEE
Confidence 456777888877653221 111110 001122 224555555553 346888887765211 11111111111222
Q ss_pred Ee---CCEEEEEcCcCCCCCCccceEEEEeCCCCCe--EeCCCCccCCcceeEEEE----CCEEEEEeccCCCCCcCCEE
Q 013797 229 TC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSW--DSLPGMRQRRKLCSGCYM----DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 229 ~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W--~~~~~~p~~r~~~~~~~~----~g~iyv~gG~~~~~~~~~~v 299 (436)
.+ ++.+++.|+.++ .+.+||..+..- ..... ..+ ....+.+ ++.+.+.|+. -..+
T Consensus 147 ~~~p~~~~~l~sgs~D~-------~v~iwd~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~------D~~i 210 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDR-------TVKVWSLGQSTPNFTLTTG--QER-GVNYVDYYPLPDKPYMITASD------DLTI 210 (304)
T ss_dssp EECTTCTTEEEEEETTS-------EEEEEETTCSSCSEEEECC--CTT-CEEEEEECCSTTCCEEEEEET------TSEE
T ss_pred EECCCCCCEEEEEeCCC-------eEEEEECCCCCccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcC------CCeE
Confidence 22 345667776542 578888865431 11100 001 1111211 4556666663 3468
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEE
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
..||..+.+-. ..+.. .......+.. ++.+++.|+..+.|.+||..+.+-.
T Consensus 211 ~iWd~~~~~~~--~~~~~------h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 211 KIWDYQTKSCV--ATLEG------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEEETTTTEEE--EEEEC------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEeCCCCccc--eeeCC------CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 88998876422 11110 0011112222 4567777777889999999876533
No 187
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.09 E-value=7 Score=38.17 Aligned_cols=192 Identities=15% Similarity=0.194 Sum_probs=101.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeC--CCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC----
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKG--PSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS---- 260 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---- 260 (436)
++.+|++-| +..|+||..+++.... +.++ . .-++....+++|++-|. ..++||+.+.+
T Consensus 158 ~~~~yfFkG----~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~---------~y~rfd~~~~~v~~g 221 (460)
T 1qhu_A 158 DEGILFFQG----NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGN---------QFLRFNPVSGEVPPG 221 (460)
T ss_dssp SSEEEEEET----TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETT---------EEEEECTTTCCCCTT
T ss_pred CCeEEEEec----ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECC---------EEEEEcCccCcccCC
Confidence 678888865 3789999998765432 2222 2 23445567899999764 36778776543
Q ss_pred --------eEeCCCC---------------c---cCCcceeEEE--ECCEEEEEeccCCCCCcCCEEEEEECCCCcEE--
Q 013797 261 --------WDSLPGM---------------R---QRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY-- 310 (436)
Q Consensus 261 --------W~~~~~~---------------p---~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~-- 310 (436)
|-.++.. | .+.....++. .+|++|++-| +..+.+|...+.+.
T Consensus 222 yPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 222 YPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp CCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--------TEEEECTTGGGCCCCE
T ss_pred CCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--------CEEEEEecCCCCcCcc
Confidence 2221110 0 0111233444 4689999976 23566665443221
Q ss_pred EcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcccCCC--------ccC-CCCCceEEEE-Ee
Q 013797 311 HIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLGLVPV--------RAD-FNRGWGIAFK-SL 380 (436)
Q Consensus 311 ~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~--------~~~-~~~~~~~~~~-~~ 380 (436)
.+.....+ .+..--++...++++|++-| +.+|+|+..++ .+.+...|. +.. ......+++. ..
T Consensus 294 ~Is~~Wpg----lP~~IDAAf~~~~~~yfFkG--~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~ 366 (460)
T 1qhu_A 294 PIAHQWPQ----GPSTVDAAFSWEDKLYLIQD--TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPG 366 (460)
T ss_dssp EGGGTCTT----SCSSCSEEEEETTEEEEEET--TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTT
T ss_pred chhhhccC----CCCCCcEEEEECCeEEEEeC--CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCC
Confidence 12111111 12223445566899999966 68999986531 233321111 111 0112334432 24
Q ss_pred CCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEee
Q 013797 381 GNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 381 ~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
.+++|+|-|.. .|+||.... -+..|...+
T Consensus 367 ~~ktyfFkG~~--------ywryd~~~~-Pr~i~~~~~ 395 (460)
T 1qhu_A 367 SSRLHIMAGRR--------LWWLDLKSG-AQATWTELP 395 (460)
T ss_dssp CCEEEEEETTE--------EEEEEGGGG-GGCCCEEEC
T ss_pred CCEEEEEECCE--------EEEEECCCC-ccchhhhCC
Confidence 68999998764 566665432 223454444
No 188
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.06 E-value=5 Score=36.40 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=73.9
Q ss_pred CCE-EEEEceecCCCeEEEEEC-CCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC----
Q 013797 187 GTH-LIVSGNEIEGGVIWRYEL-ETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS---- 260 (436)
Q Consensus 187 ~~~-iyv~GG~~~~~~v~~ydp-~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---- 260 (436)
++. .++.|+. ...+.+||. .+++-..+...+....-.++....+..++.|+.+ ..+.+||..+..
T Consensus 67 ~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 67 NTDLQIYVGTV--QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-------GLIEVIDPRNYGDGVI 137 (342)
T ss_dssp SSSEEEEEEET--TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-------SEEEEECHHHHTTBCE
T ss_pred CCCcEEEEEcC--CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-------CeEEEEcccccccccc
Confidence 555 5555553 357999999 8888766654212222222333324455555543 257788876400
Q ss_pred ---eEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCC-Cc--EEEcCCCCCCCCCCCCCCCCEEEEE-
Q 013797 261 ---WDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYA-GT--WYHIPDILKDFPAETGKSPPLIAVV- 333 (436)
Q Consensus 261 ---W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~-~~--W~~v~~~~~~~~~~~~r~~~~~~~~- 333 (436)
.+.+..+.....-.++....+. +++++. ...+..||+.+ .. ........ ......++..
T Consensus 138 ~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~-------~~~i~~i~~~~ 203 (342)
T 1yfq_A 138 AVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMN------NSQVQWFRLPLCEDDNGTIEESGL-------KYQIRDVALLP 203 (342)
T ss_dssp EEEESCSSSSSSCCCEEEEEECSSE-EEEEES------TTEEEEEESSCCTTCCCEEEECSC-------SSCEEEEEECS
T ss_pred cccCCeeeEEeeCCceEEEEecCCc-EEEEeC------CCeEEEEECCccccccceeeecCC-------CCceeEEEECC
Confidence 2222222222112233344455 445542 34688999887 32 22221110 1111122333
Q ss_pred -CCEEEEEecCCCeEEEEECCCC
Q 013797 334 -NNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 334 -~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
++.+++.++..+.+.+||....
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTT
T ss_pred CCCCEEEEEecCCcEEEEEEcCC
Confidence 5677888877888888877553
No 189
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.00 E-value=8.5 Score=38.87 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=61.1
Q ss_pred CeEEEeccCCCeEEEEecCCCC--eEeCCCCCCCCC--ccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC--EEeC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQT--RRKLPELPSDPC--FKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKG 215 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~--W~~l~~~~~~~~--~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l 215 (436)
..+|+... ...++++|..+++ |+.-...+.... ........+..++.||+.. ....++.+|..|++ |+.-
T Consensus 69 g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t---~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 69 GVIYVTAS-YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT---LDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEET-TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE---TTTEEEEEESSSCCEEEEEE
T ss_pred CEEEEEcC-CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe---CCCEEEEEECCCCCEEeeec
Confidence 34555443 2348999988755 765433322110 0000112456788998853 23579999999987 8753
Q ss_pred CCCCCCC--cccEEEEeCC------EEEEEcCcCCCCCCccceEEEEeCCCCC--eEe
Q 013797 216 PSMRRPR--CLFASATCGT------FAFVAGGHGMDGSGVLNSAERYNPETKS--WDS 263 (436)
Q Consensus 216 ~~~p~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~ 263 (436)
..-+... ...+.++.++ .||+........ ....+..||+.+++ |+.
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~--~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFG--VVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGC--CBCEEEEECTTTCCEEEEE
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccC--CCCEEEEEECCCCCEEeec
Confidence 2211100 1112233455 666532211111 23468999999876 864
No 190
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.89 E-value=7.5 Score=37.97 Aligned_cols=177 Identities=15% Similarity=0.201 Sum_probs=93.2
Q ss_pred eEEEeccCCCeEEEEecCCCCeEe--CCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCC---
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRK--LPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPS--- 217 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~--l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~--- 217 (436)
.+++|. ++..|.||..+++... .+.++. . -++....+.+|+|-| +..++||+.+++-...-|
T Consensus 160 ~~yfFk--G~~yw~yd~~~~~~~~~~w~gi~~--i-----DAA~~~~g~~YfFkG----~~y~rfd~~~~~v~~gyPk~i 226 (460)
T 1qhu_A 160 GILFFQ--GNRKWFWDLTTGTKKERSWPAVGN--C-----TSALRWLGRYYCFQG----NQFLRFNPVSGEVPPGYPLDV 226 (460)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEEECCTTSCC--C-----SEEEEETTEEEEEET----TEEEEECTTTCCCCTTCCEEH
T ss_pred eEEEEe--cccEEEEecccceeecccCCCCCc--c-----chheeeCCceEEEEC----CEEEEEcCccCcccCCCCcch
Confidence 345554 3578899988765432 112221 1 135566799999966 479999987764322111
Q ss_pred ----CC-----------------------CCC-cccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeE--eC--
Q 013797 218 ----MR-----------------------RPR-CLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWD--SL-- 264 (436)
Q Consensus 218 ----~p-----------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~--~~-- 264 (436)
+. .+. ..-++.. .++++|++-|. ..+++|...+.+. .+
T Consensus 227 s~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~---------~yWR~~~~~~~~~p~~Is~ 297 (460)
T 1qhu_A 227 RDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS---------HYWRLDTNRDGWHSWPIAH 297 (460)
T ss_dssp HHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT---------EEEECTTGGGCCCCEEGGG
T ss_pred hhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC---------EEEEEecCCCCcCccchhh
Confidence 11 011 1223333 46889988653 3566665433221 11
Q ss_pred --CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCC----CCCCC--CCCCEEEEE---
Q 013797 265 --PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDF----PAETG--KSPPLIAVV--- 333 (436)
Q Consensus 265 --~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~----~~~~~--r~~~~~~~~--- 333 (436)
+.+|.. --++...++++|++-| +.+++|+..++ .+.++.-|... ..+.. ....-+++.
T Consensus 298 ~WpglP~~--IDAAf~~~~~~yfFkG--------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~ 366 (460)
T 1qhu_A 298 QWPQGPST--VDAAFSWEDKLYLIQD--------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPG 366 (460)
T ss_dssp TCTTSCSS--CSEEEEETTEEEEEET--------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTT
T ss_pred hccCCCCC--CcEEEEECCeEEEEeC--------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCC
Confidence 223322 2234456899999976 35788886532 22222212110 11111 112223332
Q ss_pred CCEEEEEecCCCeEEEEECCC
Q 013797 334 NNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 334 ~g~lyv~gg~~~~i~~yd~~~ 354 (436)
++++|++-| +..|+||...
T Consensus 367 ~~ktyfFkG--~~ywryd~~~ 385 (460)
T 1qhu_A 367 SSRLHIMAG--RRLWWLDLKS 385 (460)
T ss_dssp CCEEEEEET--TEEEEEEGGG
T ss_pred CCEEEEEEC--CEEEEEECCC
Confidence 579999976 7899999864
No 191
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.85 E-value=4.3 Score=36.79 Aligned_cols=217 Identities=13% Similarity=0.081 Sum_probs=104.9
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC-C
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP-R 222 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~-r 222 (436)
+++.......++.||+ ++....+.. +.. ... ......+|.+|+.. .....+.+||+. ++.+.+...... +
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~-~~~--~~~--gl~~d~dG~l~v~~--~~~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLD-ATA--FTN--GNAVDAQQRLVHCE--HGRRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEE-SCS--CEE--EEEECTTSCEEEEE--TTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeC-CCC--ccc--eeeECCCCCEEEEE--CCCCEEEEECCC-CCEEEEEeccCCCc
Confidence 4444444567888888 444333221 111 000 01222367777753 123578899986 666655322111 1
Q ss_pred --cccEEEE-eCCEEEEE----cCcCC------CCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CC-EEEEEe
Q 013797 223 --CLFASAT-CGTFAFVA----GGHGM------DGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DN-KFYVIG 287 (436)
Q Consensus 223 --~~~~~~~-~~~~iyv~----GG~~~------~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~g 287 (436)
.-..++. -++.+|+. |-... ........+++||+.+++.+.+. .... ..+.+.. ++ .||+..
T Consensus 130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEE
T ss_pred cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEe
Confidence 0112222 36788885 32110 00001346899999888877653 2111 1122222 44 488875
Q ss_pred ccCCCCCcCCEEEEEECCCCcEEE---cCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEcccC
Q 013797 288 GRNEKDKPLTCGEAYDEYAGTWYH---IPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSNSWKNLGLV 363 (436)
Q Consensus 288 G~~~~~~~~~~v~~yD~~~~~W~~---v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~ 363 (436)
...... ....+++||+..+.... +..... . ...++++ -+|.||+.. .+.|.+||++.+.-..+. +
T Consensus 207 ~~~~~~-~~~~i~~~~~~~~~l~~~~~~~~~~~------~-~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~~~~~~~-~ 275 (305)
T 3dr2_A 207 TPEQGH-GSVEITAFAWRDGALHDRRHFASVPD------G-LPDGFCVDRGGWLWSSS--GTGVCVFDSDGQLLGHIP-T 275 (305)
T ss_dssp CCC----CCCEEEEEEEETTEEEEEEEEECCSS------S-CCCSEEECTTSCEEECC--SSEEEEECTTSCEEEEEE-C
T ss_pred cCCcCC-CCCEEEEEEecCCCccCCeEEEECCC------C-CCCeEEECCCCCEEEec--CCcEEEECCCCCEEEEEE-C
Confidence 421110 13578999987654221 111110 1 1112333 357888765 357999999776655553 2
Q ss_pred CCccCCCCCceEEEEEeCCEEEEEc
Q 013797 364 PVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 364 p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
|. ....+++..-++.||+..
T Consensus 276 ~~-----~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 276 PG-----TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SS-----CCCEEEECTTSCEEEEEE
T ss_pred CC-----ceeEEEEeCCCCEEEEEc
Confidence 32 112233322345677754
No 192
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.73 E-value=1.3 Score=46.45 Aligned_cols=180 Identities=9% Similarity=0.064 Sum_probs=86.8
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCC-CEEeCCCCCCCCcccEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETN-NWFKGPSMRRPRCLFAS 227 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~-~W~~l~~~p~~r~~~~~ 227 (436)
....+..||..+++...... .+.... .++. ..++..++.|+ ....+.+||..++ .....-. .....-.++
T Consensus 75 ~dg~i~vw~~~~~~~~~~~~--~~~~~v---~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~ 146 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEKVVDFE--AHPDYI---RSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFE-GHEHFVMCV 146 (814)
T ss_dssp TTSEEEEEETTTCCEEEEEE--CCSSCE---EEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEEE-CCSSCEEEE
T ss_pred CCCeEEEEECCCCcEEEEEe--cCCCCE---EEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEEc-CCCCcEEEE
Confidence 35677888887776543211 111000 0112 22444444544 2357888998776 2222111 011111222
Q ss_pred EEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEE
Q 013797 228 ATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAY 302 (436)
Q Consensus 228 ~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~y 302 (436)
+.. ++..++.|+.+ ..+.+||..+..-...-...........+.. ++.+++.|+.+ ..+..|
T Consensus 147 ~~~p~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~i~~~ 213 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLD-------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD------LTIKIW 213 (814)
T ss_dssp EEETTEEEEEEEEETT-------SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT------SEEEEE
T ss_pred EEEcCCCCEEEEEeCC-------CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC------CEEEEE
Confidence 222 45566666644 2588899876542111000111111122222 67777777633 468899
Q ss_pred ECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcE
Q 013797 303 DEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 303 D~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W 357 (436)
|..+++-...-... ......++.. ++.+++.++..+.|.+||..+.+-
T Consensus 214 d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 214 DYQTKSCVATLEGH-------MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp ETTTTEEEEEEECC-------SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSE
T ss_pred ECCCCcEEEEEcCC-------CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 98876532211100 0011112222 566777777778899999987543
No 193
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.70 E-value=0.078 Score=50.63 Aligned_cols=143 Identities=16% Similarity=0.166 Sum_probs=60.5
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC-
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK- 259 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~- 259 (436)
.+..++.||+.+. ...++.+|..|++ |+.-. .+ ...+.++.++.+|+.++.+ ..+..+|.+++
T Consensus 5 P~v~~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~---~~-~~s~p~~~~g~~~v~~s~d-------g~l~a~d~~tG~ 70 (369)
T 2hz6_A 5 VTLPETLLFVSTL---DGSLHAVSKRTGSIKWTLKE---DP-VLQVPTHVEEPAFLPDPND-------GSLYTLGSKNNE 70 (369)
T ss_dssp ---CTTEEEEEET---TSEEEEEETTTCCEEEEEEC---CC-SCCCC-----CCEEECTTT-------CCEEEC-----C
T ss_pred CeeeCCEEEEEcC---CCEEEEEECCCCCEEEEecC---CC-ceecceEcCCCEEEEeCCC-------CEEEEEECCCCc
Confidence 3456778887642 3479999998886 76533 11 1112233466788776433 24788998765
Q ss_pred -CeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEECC
Q 013797 260 -SWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVVNN 335 (436)
Q Consensus 260 -~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~~g 335 (436)
.|+.-...+... ..+.++ .++.+|+ |+ ....+.++|+.++ .|+.-.... .+ .+..++
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~------~dg~v~a~D~~tG~~~w~~~~~~~-------~~----~~p~~~ 131 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILYM-GK------KQDIWYVIDLLTGEKQQTLSSAFA-------DS----LSPSTS 131 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CCC-CE------EEEEEEEECCC--------------------------------
T ss_pred eeeeeeccCcccc-ccCceEecCCEEEE-Ee------CCCEEEEEECCCCcEEEEecCCCc-------cc----ccccCC
Confidence 465432222111 111122 4566654 32 2245889998876 465322111 11 111345
Q ss_pred EEEEEecCCCeEEEEECCCCc--EEE
Q 013797 336 ELYSLETSSNELRVYLKDSNS--WKN 359 (436)
Q Consensus 336 ~lyv~gg~~~~i~~yd~~~~~--W~~ 359 (436)
.||+. ...+.+.+||+++++ |+.
T Consensus 132 ~v~~~-~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 132 LLYLG-RTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp -EEEE-EEEEEEECCCSSSSSCCCEE
T ss_pred EEEEE-ecCCEEEEEECCCCCEEEeE
Confidence 55554 445679999988754 875
No 194
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.58 E-value=6.8 Score=36.68 Aligned_cols=150 Identities=9% Similarity=-0.002 Sum_probs=73.5
Q ss_pred CCEEEEEceecCCCeEEEEECCC----C-CEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELET----N-NWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t----~-~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
++.+++.|+. ...+.+||..+ . .-..+..... .-.+++.. ++.+++.|+.++ .+.+||..+.
T Consensus 78 ~~~~l~~~~~--dg~v~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg-------~v~iwd~~~~ 146 (416)
T 2pm9_A 78 NNKIIAGALD--NGSLELYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDNVLASGGNNG-------EIFIWDMNKC 146 (416)
T ss_dssp SSSCEEEEES--SSCEEEECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTTBEEEECSSS-------CEEBCBTTTT
T ss_pred CCCeEEEEcc--CCeEEEeecccccccccchhhccCCcc--ceEEEEEcCCCCCEEEEEcCCC-------eEEEEECCCC
Confidence 5555555543 34688888877 2 2333322211 12223332 256667766542 4788888876
Q ss_pred C------eE-eCCCCccCCcc-eeEEEE-C-CEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCE
Q 013797 260 S------WD-SLPGMRQRRKL-CSGCYM-D-NKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPL 329 (436)
Q Consensus 260 ~------W~-~~~~~p~~r~~-~~~~~~-~-g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~ 329 (436)
. -. .+......... .+.+.. + +.+++.++.+ ..+..||+.+.+-...-...... ........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~--~~~~~~v~ 218 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPN--SGIKQQLS 218 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEEEETTTTEEEEEECCCCCS--SCCCCCEE
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEEEECCCCCcceEEeccccc--cccCCceE
Confidence 5 11 11111111111 122222 2 5677777643 35899999887643322221000 00011112
Q ss_pred EEEE--CC-EEEEEecCCC---eEEEEECCCC
Q 013797 330 IAVV--NN-ELYSLETSSN---ELRVYLKDSN 355 (436)
Q Consensus 330 ~~~~--~g-~lyv~gg~~~---~i~~yd~~~~ 355 (436)
.+.. ++ .+++.++..+ .|.+||..+.
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 2222 23 5677766555 8999999874
No 195
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.51 E-value=5.8 Score=41.37 Aligned_cols=182 Identities=11% Similarity=-0.001 Sum_probs=94.4
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCC-ccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCC------CCEE---e---CCC
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPC-FKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELET------NNWF---K---GPS 217 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~-~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t------~~W~---~---l~~ 217 (436)
..+..||+.++++........... ......++.. .++.|++.. ...-+++||+.+ ..+. . ...
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT---~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST---CLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNG 468 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE---SSSCEEEEEHHHHHHCCSSEEECSEEECGGGT
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE---CCCceEEEccccccccCCcceecccccccccc
Confidence 367889999988876532111100 0000011222 257788742 112478888753 1221 1 011
Q ss_pred CCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccC-CcceeEEEE--CCEEEEEeccCCCC
Q 013797 218 MRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQR-RKLCSGCYM--DNKFYVIGGRNEKD 293 (436)
Q Consensus 218 ~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~--~g~iyv~gG~~~~~ 293 (436)
++... ..++.. -++.|++++|.. .+ +.+||+.+++++....-... .....+... +|.|++-.
T Consensus 469 l~~~~-i~~i~~d~~g~lWi~~~t~-~G------l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt------ 534 (758)
T 3ott_A 469 LSGMF-INQIIPDNEGNVWVLLYNN-KG------IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF------ 534 (758)
T ss_dssp CSCSC-EEEEEECTTSCEEEEETTC-SS------EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE------
T ss_pred cccce-eeeEEEcCCCCEEEEccCC-CC------cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe------
Confidence 22111 112222 257788865543 22 78899999988876321111 111222233 57787643
Q ss_pred CcCCEEEEEECCCCcEEEcC--CCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcc
Q 013797 294 KPLTCGEAYDEYAGTWYHIP--DILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~~v~--~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~ 361 (436)
...+..||+.++++.... .++ .....+++..+|.|++.. .+.+.+||+++.+.+...
T Consensus 535 --~~Gl~~~~~~~~~~~~~~~~gl~-------~~~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 535 --HGGVMRINPKDESQQSISFGSFS-------NNEILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQN 593 (758)
T ss_dssp --TTEEEEECC--CCCCBCCCCC----------CCEEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC-
T ss_pred --cCceEEEecCCCceEEecccCCC-------ccceEEEEECCCCEEEEC--CCCeEEEcCCCceeEEec
Confidence 234899999998876653 222 112334455588988875 467999999998877653
No 196
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.48 E-value=0.99 Score=41.12 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=72.5
Q ss_pred eccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEceecCCCeEEEEECCCCCEEeCCCCCCC----
Q 013797 147 LASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP---- 221 (436)
Q Consensus 147 ~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~---- 221 (436)
.......+..+|+.+.+-...-.++....... ......++ .+|+.+. ....++++|+.+++-...-+.+.+
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPM--VPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTTCTTCCC--CEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc--ceEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 33346788899998876543322222100001 01233344 7777653 345799999998875432111110
Q ss_pred CcccEEEEe-C-CEEEEEcCcC---CCCCC-ccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCE-EEEEeccCCCC
Q 013797 222 RCLFASATC-G-TFAFVAGGHG---MDGSG-VLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNK-FYVIGGRNEKD 293 (436)
Q Consensus 222 r~~~~~~~~-~-~~iyv~GG~~---~~~~~-~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~-iyv~gG~~~~~ 293 (436)
.....++.. + ..+|+..... ..... ....+.+||..+.+....- +........+.. +++ ||+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~------ 153 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF--EAPRQITMLAWARDGSKLYGLG------ 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE--ECCSSCCCEEECTTSSCEEEES------
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE--eCCCCcceeEECCCCCEEEEeC------
Confidence 011223332 3 4677764211 00000 1257899999887643221 111111222222 454 66652
Q ss_pred CcCCEEEEEECCCCcEE
Q 013797 294 KPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~W~ 310 (436)
..+.+||+.+++-.
T Consensus 154 ---~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 ---RDLHVMDPEAGTLV 167 (337)
T ss_dssp ---SSEEEEETTTTEEE
T ss_pred ---CeEEEEECCCCcEe
Confidence 24789999887643
No 197
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.46 E-value=6.5 Score=36.13 Aligned_cols=180 Identities=11% Similarity=0.058 Sum_probs=86.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeE--e
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWD--S 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~--~ 263 (436)
++..++.|+. ...+.+||..+++-.............+++.. ++.+++.|+.++ .+.+||..+.+-. .
T Consensus 138 ~~~~l~s~s~--dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-------~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 138 NTEYFIWADN--RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-------ILDVYNLSSPDQASSR 208 (343)
T ss_dssp -CCEEEEEET--TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-------CEEEEESSCTTSCCEE
T ss_pred CCCEEEEEeC--CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCCCCccE
Confidence 4455555553 35688999988876443222222122233332 567777776543 4889999887532 2
Q ss_pred CCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcE-EEcCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 013797 264 LPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTW-YHIPDILKDFPAETGKSPPLIAVV--NNELY 338 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W-~~v~~~~~~~~~~~~r~~~~~~~~--~g~ly 338 (436)
+.. . .......+.+ ++.+.+.|+ + +.+..||+.+.+- ..+..+... ........+.. +++.+
T Consensus 209 ~~~-~-h~~~v~~l~fs~~g~~l~s~~-~------~~v~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 209 FPV-D-EEAKIKEVKFADNGYWMVVEC-D------QTVVCFDLRKDVGTLAYPTYTIP----EFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp CCC-C-TTSCEEEEEECTTSSEEEEEE-S------SBEEEEETTSSTTCBSSCCCBC---------CCEEEEECTTSSEE
T ss_pred Eec-c-CCCCEEEEEEeCCCCEEEEEe-C------CeEEEEEcCCCCcceeecccccc----cccccceEEEECCCCCEE
Confidence 211 0 1111122222 566666665 2 2589999887642 111111000 00011112222 46666
Q ss_pred EEecC-CCeEEEEEC--CCCcEEEcc--cCCCccCCCCCceEEEEEeCCEEEEEc
Q 013797 339 SLETS-SNELRVYLK--DSNSWKNLG--LVPVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 339 v~gg~-~~~i~~yd~--~~~~W~~v~--~~p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
+.++. .+.+.+|+. ..+.|...+ .+...........++.+..++.+.++-
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred EEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEE
Confidence 66444 677777776 556799711 111111111222344445667666654
No 198
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.45 E-value=5.3 Score=37.20 Aligned_cols=182 Identities=7% Similarity=-0.050 Sum_probs=91.4
Q ss_pred EEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe--CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCC
Q 013797 145 FMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA--GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPR 222 (436)
Q Consensus 145 ~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r 222 (436)
++.......+..||..+.+.............. .++... ++.+++.|+. ...+.+||..++....+.......
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAI---TGMKFNQFNTNQLFVSSI--RGATTLRDFSGSVIQVFAKTDSWD 163 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBE---EEEEEETTEEEEEEEEET--TTEEEEEETTSCEEEEEECCCCSS
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCCcCCce---eEEEeCCCCCCEEEEEeC--CCEEEEEECCCCceEEEeccCCCC
Confidence 333333567888898877665443221111110 112222 3455555543 457899999887666554332211
Q ss_pred ccc-EEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCE-EEEEeccCCCCCcCC
Q 013797 223 CLF-ASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNK-FYVIGGRNEKDKPLT 297 (436)
Q Consensus 223 ~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~-iyv~gG~~~~~~~~~ 297 (436)
... +++.. ++..++.|+.+ ..+.+||.....-..+.. .......+.+ ++. +++.|+.+ .
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d------~ 227 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMATSSVD------A 227 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEEEEETT------S
T ss_pred CCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEEEEeCC------C
Confidence 112 22222 55666666543 358889985433222211 1111122222 344 66666633 4
Q ss_pred EEEEEECCC----CcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC
Q 013797 298 CGEAYDEYA----GTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 298 ~v~~yD~~~----~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+..||+.+ .......... .....++.. ++.+++.++..+.|.+||..+.
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~--------~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEMPHE--------KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEEECS--------SCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEEEEeCCCCCcccceEEEecCC--------CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 678899876 3322211111 011112222 5677777777889999998764
No 199
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.45 E-value=6.8 Score=36.38 Aligned_cols=224 Identities=8% Similarity=0.056 Sum_probs=98.9
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
....+..||..+..-......+....... ......++.+++.|+. ...+.+||..+.+-.. .+........+..
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~v~~~d~~~~~~~~--~~~~~~~~v~~~~ 193 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFNFEETVYSHH--MSPVSTKHCLVAVGTR--GPKVQLCDLKSGSCSH--ILQGHRQEILAVS 193 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEE--ECSSCSSCCEEEEEES--SSSEEEEESSSSCCCE--EECCCCSCEEEEE
T ss_pred CCCeEEEeeCCCCccceeccCCCceeeeE--eecCCCCCcEEEEEcC--CCeEEEEeCCCcceee--eecCCCCcEEEEE
Confidence 35667788887765443322221110000 0000113335555543 3468899987764211 1111111122222
Q ss_pred e--C-CEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCC--------C----ccCCcceeEEEE--CCEEEEEeccC
Q 013797 230 C--G-TFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPG--------M----RQRRKLCSGCYM--DNKFYVIGGRN 290 (436)
Q Consensus 230 ~--~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~--------~----p~~r~~~~~~~~--~g~iyv~gG~~ 290 (436)
+ + ..+++.|+.++ .+.+||..+.. ...+.. . .........+.+ +++.++.++.+
T Consensus 194 ~~~~~~~ll~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 194 WSPRYDYILATASADS-------RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp ECSSCTTEEEEEETTS-------CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCcEEEEEcCCC-------cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 2 2 33676766543 37888887653 122110 0 011111122222 56666666643
Q ss_pred CCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCC
Q 013797 291 EKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFN 370 (436)
Q Consensus 291 ~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~ 370 (436)
..+.+||+.++.-......... ...............+..+++++..+.+.+||..+.+-.. .+.. ...
T Consensus 267 ------g~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~--~~~~--~~~ 335 (408)
T 4a11_B 267 ------NRMRLWNSSNGENTLVNYGKVC-NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT--MLKG--HYK 335 (408)
T ss_dssp ------SCEEEEETTTCCBCCCCCCCCC-CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE--EECC--CSS
T ss_pred ------CeEEEEECCCCccceecccccc-ccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee--eecc--CCC
Confidence 3578999987653221111000 0000101111111123334444556789999988754332 2221 011
Q ss_pred CCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 371 RGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 371 ~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
....+++ ..++++++.|+.++ .+.+|.
T Consensus 336 ~v~~~~~-s~~~~~l~s~~~dg----~i~iw~ 362 (408)
T 4a11_B 336 TVDCCVF-QSNFQELYSGSRDC----NILAWV 362 (408)
T ss_dssp CEEEEEE-ETTTTEEEEEETTS----CEEEEE
T ss_pred eEEEEEE-cCCCCEEEEECCCC----eEEEEe
Confidence 1122222 34567777777763 556663
No 200
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=92.37 E-value=5 Score=34.62 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=81.8
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCCCEE--eC----CCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETNNWF--KG----PSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAER 253 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~--~l----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 253 (436)
+++...|.+|+|=| ..+|+++.....+. .+ +.+|. ..-|+... ++++|++-|. .+++
T Consensus 28 Ai~~~~g~~y~Fkg----~~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG~---------~~w~ 92 (207)
T 1pex_A 28 AITSLRGETMIFKD----RFFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRGR---------KFWA 92 (207)
T ss_dssp EEEEETTEEEEEET----TEEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEETT---------EEEE
T ss_pred EEEeCCCcEEEEEC----CEEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEccC---------EEEE
Confidence 45667999999854 36888876543321 11 23342 12233333 5899999663 3677
Q ss_pred EeCCCCC--e-EeCCC--CccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCC----CC
Q 013797 254 YNPETKS--W-DSLPG--MRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDF----PA 321 (436)
Q Consensus 254 yd~~t~~--W-~~~~~--~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~----~~ 321 (436)
|+..+-. + +.+.. +|.......|++. ++++|++-| +..+.||..+++=. +.-|... +.
T Consensus 93 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~~~d--~gyPr~i~~~~~G 162 (207)
T 1pex_A 93 LNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNHIMD--KDYPRLIEEDFPG 162 (207)
T ss_dssp ESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTTEEC--SSCCCBHHHHSTT
T ss_pred EeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCcccc--CCCCccHHHcCCC
Confidence 7643211 1 22222 2221123344443 589999976 45799998765321 1111100 00
Q ss_pred CCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcE
Q 013797 322 ETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 322 ~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W 357 (436)
.+....++...+|.+|.+-| +..++||..+++=
T Consensus 163 -ip~~iDaAf~~~g~~YfFkg--~~y~rf~~~~~~v 195 (207)
T 1pex_A 163 -IGDKVDAVYEKNGYIYFFNG--PIQFEYSIWSNRI 195 (207)
T ss_dssp -SCSCCSEEEEETTEEEEEET--TEEEEEETTTTEE
T ss_pred -CCCCccEEEEcCCcEEEEEC--CEEEEEeCCccEE
Confidence 12223344556899999976 6899999987653
No 201
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.29 E-value=2.8 Score=39.63 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=58.2
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcc-eeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCc
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKL-CSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGT 308 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~ 308 (436)
+++.++.|+.++ .+.+||..+.+-... +...... .+.+.. ++...+.|+.+ ..+..||+.+++
T Consensus 134 dg~~l~s~~~d~-------~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAEDR-------LIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTE
T ss_pred CCCEEEEEcCCC-------eEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCe
Confidence 566666666442 488899887754322 1101111 112222 55555666533 467899998876
Q ss_pred EEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE
Q 013797 309 WYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSW 357 (436)
Q Consensus 309 W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W 357 (436)
-...-... . ....++.. ++++++.|+..+.|.+||..+..-
T Consensus 199 ~~~~~~~~------~--~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 199 CSLTLSIE------D--GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp EEEEEECS------S--CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEEcC------C--CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 54322211 0 11112222 578888888888999999988654
No 202
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=92.27 E-value=0.038 Score=56.16 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=31.0
Q ss_pred CCChHHHHHHhhccC-CcccccccccccHhhhhh
Q 013797 92 PSLSDELEVLIVARV-PRAEYWKFYLLNKRFLSL 124 (436)
Q Consensus 92 ~~LPddl~~~ILarL-P~~~l~~~~~Vck~w~~l 124 (436)
..||||++..||.+| |.++..+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999877
No 203
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=92.25 E-value=3.1 Score=38.12 Aligned_cols=154 Identities=8% Similarity=-0.046 Sum_probs=72.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.+++.|+. ...+.+||..+++-... +.........+.+ ++..++.++.+ ..+.+||..+++-...
T Consensus 43 ~~~~l~~~~~--dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 43 EGDLLFSCSK--DSSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-------YSIKLWDVSNGQCVAT 111 (369)
T ss_dssp TSCEEEEEES--SSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------TEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeC--CCEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEE
Confidence 4555555543 34688999887764322 1111112222222 45566666543 2588899988764332
Q ss_pred CCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCc----EEEcCCCCCCC-CCCCCCCCCEEEEE--CCE
Q 013797 265 PGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGT----WYHIPDILKDF-PAETGKSPPLIAVV--NNE 336 (436)
Q Consensus 265 ~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~----W~~v~~~~~~~-~~~~~r~~~~~~~~--~g~ 336 (436)
-..+. .-..... -+++.++.++.+... ....+..||+.+.. +......+... ...........+.. ++.
T Consensus 112 ~~~~~--~v~~~~~~~~~~~l~~~~~~~~~-~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 112 WKSPV--PVKRVEFSPCGNYFLAILDNVMK-NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EECSS--CEEEEEECTTSSEEEEEECCBTT-BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred eecCC--CeEEEEEccCCCEEEEecCCccC-CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 11111 1111222 245555555433111 23567778765442 22211111000 00000001112222 466
Q ss_pred EEEEecCCCeEEEEECCC
Q 013797 337 LYSLETSSNELRVYLKDS 354 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~~ 354 (436)
.+++++..+.|.+||..+
T Consensus 189 ~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 189 YIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp EEEEEETTSEEEEEETTT
T ss_pred EEEEEcCCCEEEEEECCC
Confidence 777777788999999987
No 204
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.01 E-value=2.3 Score=39.74 Aligned_cols=197 Identities=8% Similarity=-0.113 Sum_probs=94.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEe-CCE-EEEEceecCC----CeEEEEECCCCCEEeCCCCCCCCcc
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCA-GTH-LIVSGNEIEG----GVIWRYELETNNWFKGPSMRRPRCL 224 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~----~~v~~ydp~t~~W~~l~~~p~~r~~ 224 (436)
...++.+|..+++...+..... .... ...+- ++. |++... ... ..++++|..+++++.+.. ..+...
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~--~~~~---~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~ 239 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTA--WLGH---PIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGES 239 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESS--CEEE---EEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEE
T ss_pred cceEEEEECCCCcEEeeccCCc--cccc---ceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCcc
Confidence 3467788888877665542111 1100 12222 243 444332 222 579999998888777755 211111
Q ss_pred cEEEEe--CCE-EEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCC--------
Q 013797 225 FASATC--GTF-AFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEK-------- 292 (436)
Q Consensus 225 ~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~-------- 292 (436)
.....+ +++ |++.+...+. ....++++|+.+++.+.+...+. .. ....- +|+++++.+....
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~---~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQ---TDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTT---CCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC---------
T ss_pred ccceEECCCCCEEEEEecCCCC---ccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 111222 444 4444322111 12358999999888766543332 11 22233 7777666542210
Q ss_pred --CCcCCEEEEEECCCCcEEEcCCCCCCC-----CCCCCCCCCEEEEECC-EEEEEecC--CCeEEEEECCCCcEEEcc
Q 013797 293 --DKPLTCGEAYDEYAGTWYHIPDILKDF-----PAETGKSPPLIAVVNN-ELYSLETS--SNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 293 --~~~~~~v~~yD~~~~~W~~v~~~~~~~-----~~~~~r~~~~~~~~~g-~lyv~gg~--~~~i~~yd~~~~~W~~v~ 361 (436)
......++.+|+.+++...+....... ........+. ..-+| .|+..... ...++.+|..+..++.+.
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPS-FTPNDDGVLFTSDFEGVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCE-ECTTSSEEEEEECTTSSCEEEEEECCTTCC----
T ss_pred cccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCce-EccCCCeEEEEecCCCCceEEEEEEccccccccc
Confidence 012357899999888765554322100 0000001111 12244 45555432 346888888887777653
No 205
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.99 E-value=11 Score=37.53 Aligned_cols=139 Identities=11% Similarity=-0.002 Sum_probs=75.6
Q ss_pred CEEEEEcCc-CCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCc
Q 013797 232 TFAFVAGGH-GMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGT 308 (436)
Q Consensus 232 ~~iyv~GG~-~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~ 308 (436)
+..++.|+. + ..+.+||..++.... ..+.........+.+ ++++.+.|+.+ ..+.+||+.+.+
T Consensus 456 ~~~l~~~~~~d-------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~ 521 (615)
T 1pgu_A 456 QNYVAVGLEEG-------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQSRE 521 (615)
T ss_dssp SSEEEEEETTT-------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTE
T ss_pred CCEEEEeecCC-------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCCCc
Confidence 555555554 3 248889998876532 122222222223333 77777777743 357899998765
Q ss_pred EEEcCCCCCCCCCCCCCCCCEEEEE------------CCEEEEEecCCCeEEEEECCCCc--EEEcccCCCccCCCCCce
Q 013797 309 WYHIPDILKDFPAETGKSPPLIAVV------------NNELYSLETSSNELRVYLKDSNS--WKNLGLVPVRADFNRGWG 374 (436)
Q Consensus 309 W~~v~~~~~~~~~~~~r~~~~~~~~------------~g~lyv~gg~~~~i~~yd~~~~~--W~~v~~~p~~~~~~~~~~ 374 (436)
-... +.. ........+.. ++++++.++..+.|.+||..+.. ...+ .. ....-..
T Consensus 522 ~~~~--~~~-----~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~--h~~~v~~ 589 (615)
T 1pgu_A 522 VKTS--RWA-----FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL---NA--HKDGVNN 589 (615)
T ss_dssp EEEC--CSC-----CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET---TS--STTCEEE
T ss_pred ceeE--eec-----CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh---hc--CccceEE
Confidence 4332 210 01111222333 67888888888899999998752 2222 11 1111222
Q ss_pred EEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 375 IAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 375 ~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
+++ ..+++ ++.+|.+ ..+.+|.
T Consensus 590 l~~-s~~~~-l~s~~~d----~~v~iw~ 611 (615)
T 1pgu_A 590 LLW-ETPST-LVSSGAD----ACIKRWN 611 (615)
T ss_dssp EEE-EETTE-EEEEETT----SCEEEEE
T ss_pred EEE-cCCCC-eEEecCC----ceEEEEe
Confidence 333 45677 7777766 3566774
No 206
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.98 E-value=4.3 Score=36.36 Aligned_cols=144 Identities=8% Similarity=0.032 Sum_probs=73.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++ ++.+|. .+.+.+||..|++-.+.-.+........++.+ +++.++.|+.++ .+.++|..+++-...
T Consensus 36 ~~-~lAvg~---D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-------~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 36 GN-VLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TS-EEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-------EEEEEETTTTEEEEE
T ss_pred CC-EEEEEe---CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-------cEEEeecCCceeEEE
Confidence 44 445542 35799999999986654333222222222222 566777776542 588899888763221
Q ss_pred CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEE-EEECCEEEEEecC
Q 013797 265 PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLI-AVVNNELYSLETS 343 (436)
Q Consensus 265 ~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~-~~~~g~lyv~gg~ 343 (436)
+............++.+.+.|+.+ ..+..++..+.......... .......+ ...++..++.++.
T Consensus 105 --~~~h~~~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 105 --MTSHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSG------HSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp --EECCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC------CSSCEEEEEECTTSSEEEEEET
T ss_pred --ecCccceEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcC------ccCceEEEEEcCCCCEEEEEec
Confidence 111111222334455555656532 34455665544322111000 00000111 1225566777777
Q ss_pred CCeEEEEECCCC
Q 013797 344 SNELRVYLKDSN 355 (436)
Q Consensus 344 ~~~i~~yd~~~~ 355 (436)
.+.|.+||..+.
T Consensus 171 d~~i~iwd~~~~ 182 (318)
T 4ggc_A 171 DNLVNVWPSAPG 182 (318)
T ss_dssp TSCEEEEESSCB
T ss_pred CcceeEEECCCC
Confidence 788999998764
No 207
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.80 E-value=5.5 Score=33.94 Aligned_cols=146 Identities=14% Similarity=0.087 Sum_probs=80.7
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCC--CEE--eC----CCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETN--NWF--KG----PSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSA 251 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~--~W~--~l----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 251 (436)
+++..+|.+|+|=| ..+|+++.... ... .+ +.+|.. --|+... ++++|++-|. ..
T Consensus 11 Ai~~~~g~~yfFkg----~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG~---------~y 75 (195)
T 1itv_A 11 AIAEIGNQLYLFKD----GKYWRFSEGRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSGR---------QV 75 (195)
T ss_dssp EEEEETTEEEEEET----TEEEEECCSSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEETT---------EE
T ss_pred EEEEeCCEEEEEEC----CEEEEEECCccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeCC---------EE
Confidence 35667999999855 46899887652 221 11 233422 2233333 6789999663 36
Q ss_pred EEEeCCCCCe-EeCC--CCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-----cCCCCCCCCC
Q 013797 252 ERYNPETKSW-DSLP--GMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-----IPDILKDFPA 321 (436)
Q Consensus 252 ~~yd~~t~~W-~~~~--~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-----v~~~~~~~~~ 321 (436)
++|+..+..- +.+. .+|.......|++. ++++|++-| +..+.||..+++=.. +.....+
T Consensus 76 w~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~G--- 144 (195)
T 1itv_A 76 WVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPG--- 144 (195)
T ss_dssp EEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTT---
T ss_pred EEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCC---
Confidence 6776432110 0111 12221112334443 789999976 357899987754211 1100001
Q ss_pred CCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 322 ETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 322 ~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+....++...+|.+|.+-| +..++||..+..
T Consensus 145 -vp~~idaa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 145 -VPLDTHDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp -SCSSCSEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred -CCCCCCEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 12223455566899999976 689999987764
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.74 E-value=3.3 Score=37.59 Aligned_cols=183 Identities=9% Similarity=-0.009 Sum_probs=89.4
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEE----ceec-----------CCCeEEEEEC
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVS----GNEI-----------EGGVIWRYEL 207 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~----GG~~-----------~~~~v~~ydp 207 (436)
.++++..+...+..||+. ++...+...............++..+|.||+. |-.. ....+++||+
T Consensus 98 ~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 98 RLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp CEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred CEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 345554445677888876 55554432211111111111233447888885 3210 1257999999
Q ss_pred CCCCEEeCCCCCCCCcccEEEEe-CC-EEEEEcCcCCCCCCccceEEEEeCCCCCeEe---CCCCccCCcceeEEE-ECC
Q 013797 208 ETNNWFKGPSMRRPRCLFASATC-GT-FAFVAGGHGMDGSGVLNSAERYNPETKSWDS---LPGMRQRRKLCSGCY-MDN 281 (436)
Q Consensus 208 ~t~~W~~l~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~r~~~~~~~-~~g 281 (436)
.+++.+.+. .... ....+.. ++ .+|+........ ....+++||...+.... ....+... ..+.++ -+|
T Consensus 177 ~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~~~~~~~--~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~~d~~G 250 (305)
T 3dr2_A 177 DGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQTPEQGH--GSVEITAFAWRDGALHDRRHFASVPDGL-PDGFCVDRGG 250 (305)
T ss_dssp SSCCCEEEE--EESS-EEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTEEEEEEEEECCSSSC-CCSEEECTTS
T ss_pred CCCcEEEEe--cCCC-CcceEEcCCCCEEEEEecCCcCC--CCCEEEEEEecCCCccCCeEEEECCCCC-CCeEEECCCC
Confidence 888877654 1111 1222332 34 588875432110 12468889887554211 11111111 111222 367
Q ss_pred EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C-CEEEEEecCCCeEEEEEC
Q 013797 282 KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N-NELYSLETSSNELRVYLK 352 (436)
Q Consensus 282 ~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~-g~lyv~gg~~~~i~~yd~ 352 (436)
+||+..+ ..+.+||+....-..+. ++ . . ...+.+ + +.||+... +.+++++.
T Consensus 251 ~lwv~~~--------~gv~~~~~~g~~~~~~~-~~------~--~-~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 251 WLWSSSG--------TGVCVFDSDGQLLGHIP-TP------G--T-ASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp CEEECCS--------SEEEEECTTSCEEEEEE-CS------S--C-CCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred CEEEecC--------CcEEEECCCCCEEEEEE-CC------C--c-eeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 7777541 34899999766554443 22 1 1 112333 3 46777643 56777764
No 209
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=91.52 E-value=8.3 Score=38.29 Aligned_cols=107 Identities=12% Similarity=0.162 Sum_probs=57.1
Q ss_pred EEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCc---ceeEEEE--C-CEEEEEeccCCCCCcCCEEEEEECCCC
Q 013797 234 AFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRK---LCSGCYM--D-NKFYVIGGRNEKDKPLTCGEAYDEYAG 307 (436)
Q Consensus 234 iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~---~~~~~~~--~-g~iyv~gG~~~~~~~~~~v~~yD~~~~ 307 (436)
+++.|+.+ ..+.+||..+.+-... +..... ....+.+ + +++++.|+.+ ..+.+||+.++
T Consensus 175 ~l~~~~~d-------~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~ 239 (615)
T 1pgu_A 175 RSMTVGDD-------GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD------RKISCFDGKSG 239 (615)
T ss_dssp EEEEEETT-------TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT------CCEEEEETTTC
T ss_pred EEEEEeCC-------CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC------CeEEEEECCCC
Confidence 56666543 3578888776543221 111111 1222222 4 6777777643 35789999877
Q ss_pred cEEEcC-CCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEE
Q 013797 308 TWYHIP-DILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 308 ~W~~v~-~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
+-...- ..... .......++..++..++.++..+.+.+||..+.+-..
T Consensus 240 ~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 240 EFLKYIEDDQEP----VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp CEEEECCBTTBC----CCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEeEEecccccc----cCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 643322 10000 0111112222277778888778899999998765443
No 210
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.44 E-value=8.9 Score=35.61 Aligned_cols=150 Identities=9% Similarity=-0.001 Sum_probs=73.3
Q ss_pred EEEEEceecCCCeEEEEECCCCC------EEeCCCCCCC---CcccEEEEe-----CCEE-EEEcCcCCCCCCccceEEE
Q 013797 189 HLIVSGNEIEGGVIWRYELETNN------WFKGPSMRRP---RCLFASATC-----GTFA-FVAGGHGMDGSGVLNSAER 253 (436)
Q Consensus 189 ~iyv~GG~~~~~~v~~ydp~t~~------W~~l~~~p~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~~~~ 253 (436)
.+++.|+. ...+.+||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.++ .+.+
T Consensus 82 ~~l~s~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-------~i~i 152 (397)
T 1sq9_A 82 CLVATTSF--SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-------TTYI 152 (397)
T ss_dssp EEEEEEET--TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-------CEEE
T ss_pred cEEEEEcC--CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-------cEEE
Confidence 66666654 3468888887776 7776554311 112223333 3455 66665442 3677
Q ss_pred EeCCC------CC---eEeCCCCc--------cCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCC
Q 013797 254 YNPET------KS---WDSLPGMR--------QRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDI 315 (436)
Q Consensus 254 yd~~t------~~---W~~~~~~p--------~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~ 315 (436)
||..+ .. |.....+. ....-.+.+.. ++ +++.|+. ...+..||+.+.+-...-..
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~------dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN------NGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT------TSEEEEEETTTTEEEEEEEC
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC------CCcEEEEECCCCceeEEEec
Confidence 77765 22 11100110 01111122222 46 6666653 34689999987653322111
Q ss_pred CCCCCCCCCCCCCEEEEE--CCEEEEEecCC---CeEEEEECCCCc
Q 013797 316 LKDFPAETGKSPPLIAVV--NNELYSLETSS---NELRVYLKDSNS 356 (436)
Q Consensus 316 ~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~---~~i~~yd~~~~~ 356 (436)
.... . ........+.. ++.+++.++.. +.|.+||..+.+
T Consensus 226 ~~~h-~-~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 226 QHSM-I-NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp CC-----CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccc-c-ccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 0000 0 00111112222 56777777666 789999998754
No 211
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.37 E-value=11 Score=38.72 Aligned_cols=99 Identities=9% Similarity=-0.069 Sum_probs=52.2
Q ss_pred eEEEEecCCCCeEeCCCCCCCC----------------Cc----cCCCeeeEEeCCEEEEEceecCCCeEEEEECCCC--
Q 013797 153 SWWAFDRHFQTRRKLPELPSDP----------------CF----KLGDKESLCAGTHLIVSGNEIEGGVIWRYELETN-- 210 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~----------------~~----~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~-- 210 (436)
.++.+|..+++...+....... .. ........+-+|..++++.. ..++++|..++
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~---~~i~~~d~~~~~~ 141 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG---GELYLYDLKQEGK 141 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET---TEEEEEESSSCST
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC---CcEEEEECCCCCc
Confidence 7889999888876554322110 00 00001123345554444432 68999999887
Q ss_pred -CEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 211 -NWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 211 -~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
+-+.+..... ......+ +++.++++.. ..++++|..+++...+.
T Consensus 142 ~~~~~l~~~~~---~~~~~~~SPDG~~la~~~~--------~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 142 AAVRQLTHGEG---FATDAKLSPKGGFVSFIRG--------RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp TSCCBCCCSSS---CEEEEEECTTSSEEEEEET--------TEEEEEETTTTEEEECC
T ss_pred ceEEEcccCCc---ccccccCCCCCCEEEEEeC--------CcEEEEecCCCCEEEec
Confidence 5544433211 1122222 4543333321 26899999988776653
No 212
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.19 E-value=7.7 Score=39.10 Aligned_cols=162 Identities=13% Similarity=0.028 Sum_probs=83.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeC-C--CC--------CCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKG-P--SM--------RRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYN 255 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l-~--~~--------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd 255 (436)
+.++|+... ..+.+.++|..|.+=.+. + .+ |.+|.....+..++..+++.-. ....+++.|
T Consensus 255 Gk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~------~~g~v~~vd 326 (567)
T 1qks_A 255 DKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK------ETGKILLVD 326 (567)
T ss_dssp TTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEE
T ss_pred CCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec------CCCeEEEEe
Confidence 457777643 346788999888764332 2 11 1223222222223333333211 124678888
Q ss_pred CCCCCeEeCCCCccCCcceeEEE-ECCEE-EEEeccCCCCCcCCEEEEEECCCCcEEEcCCC-CCCCCCCCCCCCCEEEE
Q 013797 256 PETKSWDSLPGMRQRRKLCSGCY-MDNKF-YVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDI-LKDFPAETGKSPPLIAV 332 (436)
Q Consensus 256 ~~t~~W~~~~~~p~~r~~~~~~~-~~g~i-yv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~-~~~~~~~~~r~~~~~~~ 332 (436)
..+.....+..++..+..|...+ -+++. |+... ..+.+.++|.++++=...-+. .. .|.+..+.....
T Consensus 327 ~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~---~Phpg~g~~~~~ 397 (567)
T 1qks_A 327 YTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQ---TPHPGRGANFVH 397 (567)
T ss_dssp TTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSS---SBCCTTCEEEEE
T ss_pred cCCCccceeeeeeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCc---CCCCccceeeEC
Confidence 87765544433444444444433 24554 44332 356799999998864322222 10 112212222222
Q ss_pred E-CCEEEEEec-CCCeEEEEECCCC-----cEEEcccCCC
Q 013797 333 V-NNELYSLET-SSNELRVYLKDSN-----SWKNLGLVPV 365 (436)
Q Consensus 333 ~-~g~lyv~gg-~~~~i~~yd~~~~-----~W~~v~~~p~ 365 (436)
- ++.+|+... ..+.|.++|..+. .|+.+..++.
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence 2 367887753 2468999988763 3988876654
No 213
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=91.04 E-value=8 Score=34.34 Aligned_cols=137 Identities=12% Similarity=0.179 Sum_probs=65.9
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEE
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~ 310 (436)
++..++.|+.++ .+.+||..... ..+...........+..-++. ++.|+. ...+..||..+.+-.
T Consensus 154 ~~~~l~~~~~d~-------~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~------dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASADK-------TIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSN------DGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETTS-------CEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEET------TSEEEEEETTTCCEE
T ss_pred CCCEEEEEECCC-------CEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccC------CCeEEEEECCchhhh
Confidence 555666665432 37778833221 111111111112222334677 555653 346889998876432
Q ss_pred E-cCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEc
Q 013797 311 H-IPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 311 ~-v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
. +.... .....++.. +++ ++.++..+.|.+||..+.+-...-..+. .....+++ ..+++ ++.|
T Consensus 219 ~~~~~~~--------~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~i~~~~~-~~~~~-~~~~ 283 (313)
T 3odt_A 219 RTYEGHE--------SFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPA----ISIWSVDC-MSNGD-IIVG 283 (313)
T ss_dssp EEEECCS--------SCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSS----SCEEEEEE-CTTSC-EEEE
T ss_pred hhhhcCC--------ceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccC----ceEEEEEE-ccCCC-EEEE
Confidence 2 11111 011122222 444 5566678899999998876444322111 11112222 33556 4556
Q ss_pred CCCCCCCCcEEEE
Q 013797 389 ASSTSSHESMAIY 401 (436)
Q Consensus 389 G~~~~~~~~~~~y 401 (436)
+.+ ..+.+|
T Consensus 284 ~~d----g~i~iw 292 (313)
T 3odt_A 284 SSD----NLVRIF 292 (313)
T ss_dssp ETT----SCEEEE
T ss_pred eCC----CcEEEE
Confidence 665 367777
No 214
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.01 E-value=9.3 Score=35.03 Aligned_cols=185 Identities=11% Similarity=-0.019 Sum_probs=87.8
Q ss_pred EEEeccCCCeEEEEecCCCCeEeCCCCCCCC--CccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCE-EeCCCCCC
Q 013797 144 VFMLASGDSSWWAFDRHFQTRRKLPELPSDP--CFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNW-FKGPSMRR 220 (436)
Q Consensus 144 l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~--~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W-~~l~~~p~ 220 (436)
+++.......+..||..+++-...-...... .+... ...+..++.|.+.. ....+.+||..+.+- +... ...
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~---~~~~~~~~~~~~~~~~~~~~-~~~ 124 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLY---PGNQITILDSKTNKVLREIE-VDS 124 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEE---TTTEEEEEETTTCCEEEEEE-CCC
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEE---ccCceEEeecCCcceeEEee-cCC
Confidence 3344444567888888766532110000000 01100 12233455555542 224566777777762 2221 111
Q ss_pred CCcccEEEEe---CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcC
Q 013797 221 PRCLFASATC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 221 ~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~ 296 (436)
...-.+++.. ++..++.|+.++ .+.+||..+++-..+..........+++. -++.+++.|+.+
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg-------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d------ 191 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRG-------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD------ 191 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTC-------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT------
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCC-------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC------
Confidence 1111112211 455666666442 48889998877543321111111122222 267788877744
Q ss_pred CEEEEEECCCCcEE--EcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC
Q 013797 297 TCGEAYDEYAGTWY--HIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 297 ~~v~~yD~~~~~W~--~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
..+.+||+.+++-. .+.. . .......+.+ ++..++.++ .+.|.+||..+.
T Consensus 192 g~i~iwd~~~~~~~~~~~~~-~-------h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPV-D-------EEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp SCEEEEESSCTTSCCEECCC-C-------TTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred CEEEEEECCCCCCCccEEec-c-------CCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence 35789999877532 2221 0 0011112222 556666665 459999999875
No 215
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.98 E-value=8.7 Score=34.67 Aligned_cols=165 Identities=12% Similarity=0.162 Sum_probs=83.8
Q ss_pred CCeEEEEecC-CCCeEeCCCCCCCCCccCCCeeeEEe-CCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCCcccE
Q 013797 151 DSSWWAFDRH-FQTRRKLPELPSDPCFKLGDKESLCA-GTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPRCLFA 226 (436)
Q Consensus 151 ~~~~~~~dp~-~~~W~~l~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r~~~~ 226 (436)
...+++||+. ...|..-.+.+ .. . +.+.. ++.||+.. ....++.||+. ++ |..-.+ .... .+
T Consensus 116 ~~~l~~~d~~g~~~~~~~~~~~--~~--~---~~~~~~~g~l~vgt---~~~~l~~~d~~-g~~~~~~~~~--~~~~-~~ 181 (330)
T 3hxj_A 116 DGHLYAINTDGTEKWRFKTKKA--IY--A---TPIVSEDGTIYVGS---NDNYLYAINPD-GTEKWRFKTN--DAIT-SA 181 (330)
T ss_dssp TSEEEEECTTSCEEEEEECSSC--CC--S---CCEECTTSCEEEEC---TTSEEEEECTT-SCEEEEEECS--SCCC-SC
T ss_pred CCEEEEEcCCCCEEEEEcCCCc--ee--e---eeEEcCCCEEEEEc---CCCEEEEECCC-CCEeEEEecC--CCce-ee
Confidence 4578899987 33455432211 11 1 12333 67777743 23578999998 44 654322 1211 22
Q ss_pred EEE-eCCEEEEEcCcCCCCCCccceEEEEeCCC-CCeEeCCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEE
Q 013797 227 SAT-CGTFAFVAGGHGMDGSGVLNSAERYNPET-KSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 227 ~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
.+. -++.||+.. . .+.+||... ..|+..... .. ..+.+.. +|.||+.. ....+.+||
T Consensus 182 ~~~d~~g~l~v~t--~--------~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t-------~~~gl~~~~ 241 (330)
T 3hxj_A 182 ASIGKDGTIYFGS--D--------KVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIYVTS-------LDGHLYAIN 241 (330)
T ss_dssp CEECTTCCEEEES--S--------SEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEEEEE-------TTTEEEEEC
T ss_pred eEEcCCCEEEEEe--C--------EEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEEEEc-------CCCeEEEEC
Confidence 223 367787765 1 277888432 236654221 11 1122222 45787754 124578888
Q ss_pred CCCCc-EEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCC-cEEE
Q 013797 304 EYAGT-WYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSN-SWKN 359 (436)
Q Consensus 304 ~~~~~-W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~-~W~~ 359 (436)
..... |..-.... . ...++.. +|.||+.. ..+.+.+||+..+ .|..
T Consensus 242 ~~g~~~~~~~~~~~------~---~~~~~~~~~g~l~v~t-~~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 242 PDGTEKWRFKTGKR------I---ESSPVIGNTDTIYFGS-YDGHLYAINPDGTEKWNF 290 (330)
T ss_dssp TTSCEEEEEECSSC------C---CSCCEECTTSCEEEEC-TTCEEEEECTTSCEEEEE
T ss_pred CCCCEeEEeeCCCC------c---cccceEcCCCeEEEec-CCCCEEEECCCCcEEEEE
Confidence 75543 54332111 0 0112333 67888753 3458999998543 4554
No 216
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=90.72 E-value=11 Score=35.28 Aligned_cols=188 Identities=9% Similarity=0.066 Sum_probs=93.1
Q ss_pred eccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCC--EEeCCCCCCCC
Q 013797 147 LASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNN--WFKGPSMRRPR 222 (436)
Q Consensus 147 ~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~~p~~r 222 (436)
.......+..||..++..........+..+.....++.. .++.+++.|+. ...+.+||..... -..+.... .
T Consensus 175 s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~--D~~v~~wd~~~~~~~~~~~~~h~--~ 250 (380)
T 3iz6_a 175 TGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC--DTTVRLWDLRITSRAVRTYHGHE--G 250 (380)
T ss_dssp EECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET--TSCEEEEETTTTCCCCEEECCCS--S
T ss_pred EECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC--CCeEEEEECCCCCcceEEECCcC--C
Confidence 333456788899888765433211111111111011111 25667777764 3468889986321 12221111 1
Q ss_pred cccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC-CCCcc----CCcceeEE--EECCEEEEEeccCCCCC
Q 013797 223 CLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL-PGMRQ----RRKLCSGC--YMDNKFYVIGGRNEKDK 294 (436)
Q Consensus 223 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~----~r~~~~~~--~~~g~iyv~gG~~~~~~ 294 (436)
.-.+++.. ++..++.|+.++ .+.++|..++.-... ...+. ......++ .-+|++.+.|+.+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~-------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---- 319 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDG-------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---- 319 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSS-------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT----
T ss_pred CeEEEEEecCCCeEEEEcCCC-------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC----
Confidence 11222222 566677776543 478899887653322 11110 01111222 2367777777643
Q ss_pred cCCEEEEEECCCCcEE-EcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCC
Q 013797 295 PLTCGEAYDEYAGTWY-HIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 295 ~~~~v~~yD~~~~~W~-~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
..+.+||..+..-. .+..+.... .. ...+++. -+|..++.|+..+.|.+|+....
T Consensus 320 --g~i~vwd~~~~~~~~~~~~~~~~h---~~-~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 320 --GDCYVWDTLLAEMVLNLGTLQNSH---EG-RISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp --SCEEEEETTTCCEEEEECCSCSSC---CC-CCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred --CCEEEEECCCCceEEEEecccCCC---CC-ceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 35789998776543 232222110 11 1112222 26778888888889999988653
No 217
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.61 E-value=4.5 Score=36.61 Aligned_cols=149 Identities=10% Similarity=0.080 Sum_probs=69.7
Q ss_pred EEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC
Q 013797 189 HLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM 267 (436)
Q Consensus 189 ~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 267 (436)
.+++.|+. ...+.+||..+.+....-.-. ...-.+++.. ++.+++.|+.++ .+.+||..+..-.. .+
T Consensus 186 ~~~~s~~~--d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg-------~i~iwd~~~~~~~~--~~ 253 (340)
T 4aow_A 186 PIIVSCGW--DKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDG-------QAMLWDLNEGKHLY--TL 253 (340)
T ss_dssp CEEEEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC-------EEEEEETTTTEEEE--EE
T ss_pred cEEEEEcC--CCEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCC-------eEEEEEeccCceee--ee
Confidence 34444443 346888999887643321111 1111122222 566777766542 57888887654221 11
Q ss_pred ccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCCC-EEEEE--CCEEEEEecC
Q 013797 268 RQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSPP-LIAVV--NNELYSLETS 343 (436)
Q Consensus 268 p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~-~~~~~--~g~lyv~gg~ 343 (436)
.....-...+...+..++.++. -..+.+||..+..-.. +......... ...... ..+.. +++.++.|+.
T Consensus 254 ~~~~~v~~~~~~~~~~~~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 254 DGGDIINALCFSPNRYWLCAAT------GPSIKIWDLEGKIIVDELKQEVISTSS-KAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp ECSSCEEEEEECSSSSEEEEEE------TTEEEEEETTTTEEEEEECCC--------CCCCCEEEEEECTTSSEEEEEET
T ss_pred cCCceEEeeecCCCCceeeccC------CCEEEEEECCCCeEEEeccccceeeec-cCCCCCEEEEEECCCCCEEEEEeC
Confidence 1111112222333334445553 2457888887764322 2111100000 011111 11222 5677777887
Q ss_pred CCeEEEEECCCCc
Q 013797 344 SNELRVYLKDSNS 356 (436)
Q Consensus 344 ~~~i~~yd~~~~~ 356 (436)
.+.|.+||.++++
T Consensus 327 Dg~v~iW~~~tGt 339 (340)
T 4aow_A 327 DNLVRVWQVTIGT 339 (340)
T ss_dssp TSCEEEEEEEC--
T ss_pred CCEEEEEeCCCcC
Confidence 8899999987753
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.35 E-value=3.2 Score=37.69 Aligned_cols=137 Identities=9% Similarity=0.139 Sum_probs=66.6
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCC-EEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCC-CCCeEe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNN-WFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPE-TKSWDS 263 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~ 263 (436)
.++.||+... . ++.||+..+. |+...+ ... ....+..++.||+.... ..+..||+. ...|+.
T Consensus 69 ~~g~l~v~t~----~-l~~~d~~g~~~~~~~~~--~~~-~~~~~~~~~~l~v~t~~--------~~l~~~d~~g~~~~~~ 132 (330)
T 3hxj_A 69 KDGTIYFGSD----K-VYAINPDGTEKWRFDTK--KAI-VSDFTIFEDILYVTSMD--------GHLYAINTDGTEKWRF 132 (330)
T ss_dssp TTTEECCSSC----E-EEEECCCGGGGGGSCC--------CCEEEETTEEEEECTT--------SEEEEECTTSCEEEEE
T ss_pred cCCcEEEecC----c-EEEECCCCcEEEEEECC--CCc-ccCceEECCEEEEEecC--------CEEEEEcCCCCEEEEE
Confidence 3777776422 2 8999974332 433211 111 11223348888875421 247888887 234664
Q ss_pred CCCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCC-cEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEE
Q 013797 264 LPGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAG-TWYHIPDILKDFPAETGKSPPLIAV-VNNELYSL 340 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~-~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~ 340 (436)
....+ . ..+.+.. ++.||+.. ....++.||+... .|..-.... ....++. .+|.||+.
T Consensus 133 ~~~~~--~-~~~~~~~~~g~l~vgt-------~~~~l~~~d~~g~~~~~~~~~~~---------~~~~~~~d~~g~l~v~ 193 (330)
T 3hxj_A 133 KTKKA--I-YATPIVSEDGTIYVGS-------NDNYLYAINPDGTEKWRFKTNDA---------ITSAASIGKDGTIYFG 193 (330)
T ss_dssp ECSSC--C-CSCCEECTTSCEEEEC-------TTSEEEEECTTSCEEEEEECSSC---------CCSCCEECTTCCEEEE
T ss_pred cCCCc--e-eeeeEEcCCCEEEEEc-------CCCEEEEECCCCCEeEEEecCCC---------ceeeeEEcCCCEEEEE
Confidence 32211 1 1122333 67777642 1245788888722 355432211 0111233 25666665
Q ss_pred ecCCCeEEEEECCC-CcEEEc
Q 013797 341 ETSSNELRVYLKDS-NSWKNL 360 (436)
Q Consensus 341 gg~~~~i~~yd~~~-~~W~~v 360 (436)
. +.+.+||... ..|+..
T Consensus 194 t---~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 194 S---DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp S---SSEEEECTTSCEEEEEC
T ss_pred e---CEEEEECCCCcEEEEEc
Confidence 3 6788888432 245543
No 219
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=90.09 E-value=18 Score=36.88 Aligned_cols=110 Identities=15% Similarity=0.075 Sum_probs=55.7
Q ss_pred ceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCC-cEEEcCCCCCCCCCCCCC
Q 013797 249 NSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAG-TWYHIPDILKDFPAETGK 325 (436)
Q Consensus 249 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~-~W~~v~~~~~~~~~~~~r 325 (436)
..++++|..+++-..+............+.. +|+..+++..+... ....+..+|+.++ ....+........ ...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~--~~~ 311 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHY--VEP 311 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSC--CCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCe--ECc
Confidence 5688999998876655322111111122222 56544444333222 3457899999988 6665532110000 000
Q ss_pred CCCEEEEE--CCEEEEEecC--CCeEEEEECCCCcEEEcc
Q 013797 326 SPPLIAVV--NNELYSLETS--SNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 326 ~~~~~~~~--~g~lyv~gg~--~~~i~~yd~~~~~W~~v~ 361 (436)
.......- +|++++.+.. ...++.+|...+..+.+.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 00111222 6776555533 346788887777677664
No 220
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.09 E-value=2.7 Score=40.77 Aligned_cols=144 Identities=10% Similarity=-0.044 Sum_probs=80.6
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE-eC-CEEEEEcCcCCCCCCccceEEEEeCCCCCeE-
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT-CG-TFAFVAGGHGMDGSGVLNSAERYNPETKSWD- 262 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~- 262 (436)
.++.||+.... ..+.++|+.+++...+.. ...+ -..+++ -+ +.||+....... ....+..++.. +.+.
T Consensus 148 ~~g~Lyv~d~~---~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~~~---~~~~v~~~~~~-g~~~~ 218 (430)
T 3tc9_A 148 NHNHLYLVGEQ---HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQNNN---DRPNNYILTRE-SGFKV 218 (430)
T ss_dssp EEEEEEEEEBT---EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCSCT---TSEEEEEEEGG-GTSCS
T ss_pred CCCeEEEEeCC---CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCCCc---ccceEEEEeCC-Cceee
Confidence 35889988532 689999999988777644 1111 112222 23 459998654321 22345666653 3332
Q ss_pred --eCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-E
Q 013797 263 --SLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-E 336 (436)
Q Consensus 263 --~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~ 336 (436)
.++.+. .-+.+++. ++.||+..- ....+++||+.+..-..+...+. ......+++. +| .
T Consensus 219 ~~~l~~~~---~p~giavdp~~g~lyv~d~------~~~~V~~~~~~~~~~~~~~~~~~------~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 219 ITELTKGQ---NCNGAETHPINGELYFNSW------NAGQVFRYDFTTQETTPLFTIQD------SGWEFHIQFHPSGNY 283 (430)
T ss_dssp EEEEEECS---SCCCEEECTTTCCEEEEET------TTTEEEEEETTTTEEEEEEECSS------SSCCEEEEECTTSSE
T ss_pred eeeeccCC---CceEEEEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEEEcCC------CCcceeEEEcCCCCE
Confidence 222222 12334443 678998753 23579999998776534333221 1111133333 45 4
Q ss_pred EEEEecCCCeEEEEECC
Q 013797 337 LYSLETSSNELRVYLKD 353 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~ 353 (436)
||+.....+.|++++.+
T Consensus 284 lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCC
Confidence 99998777889997765
No 221
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.08 E-value=13 Score=35.20 Aligned_cols=181 Identities=9% Similarity=0.167 Sum_probs=88.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
+..++.+|..+++...+-.+..+...- .+++ .-++..++.|+. ...+.+||..+++-...- ........+..
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V---~sv~fspdg~~lasgs~--Dg~v~iWd~~~~~~~~~~--~~h~~~v~~~s 196 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTS--SAEVQLWDVQQQKRLRNM--TSHSARVGSLS 196 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEE--CCCSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcE---EEEEECCCCCEEEEEEC--CCeEEEEEcCCCcEEEEE--eCCCCceEEEe
Confidence 568899999998876554333222111 1122 235666666653 356899999888643221 11222233444
Q ss_pred eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEE--EECCEEEEEeccCCCCCcCCEEEEEECCCC
Q 013797 230 CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGC--YMDNKFYVIGGRNEKDKPLTCGEAYDEYAG 307 (436)
Q Consensus 230 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~--~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~ 307 (436)
.++.+.+.|+.+ ..+..+|..+...... .+.......... .-+++..+.++.+ +.+.++|..++
T Consensus 197 ~~~~~l~sgs~d-------~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~~l~s~~~D------~~v~i~~~~~~ 262 (420)
T 4gga_A 197 WNSYILSSGSRS-------GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVWPSAPG 262 (420)
T ss_dssp EETTEEEEEETT-------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEESSCC
T ss_pred eCCCEEEEEeCC-------CceeEeeecccceeeE-EecccccceeeeeecCCCCeeeeeecc------ccceEEeeccc
Confidence 566777776644 2467777765442211 011111111111 1245556666533 34677777654
Q ss_pred c--EEEcCCCCCCCCCCCCCCCC--EEEEE--CCEEEEE-ec-CCCeEEEEECCCCcEEE
Q 013797 308 T--WYHIPDILKDFPAETGKSPP--LIAVV--NNELYSL-ET-SSNELRVYLKDSNSWKN 359 (436)
Q Consensus 308 ~--W~~v~~~~~~~~~~~~r~~~--~~~~~--~g~lyv~-gg-~~~~i~~yd~~~~~W~~ 359 (436)
. +..+.... ..... .++.. +..+++. +| ..+.|.+||..+.+-..
T Consensus 263 ~~~~~~~~~~~-------~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 263 EGGWVPLQTFT-------QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp SSCSCCSEEEC-------CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred cccceeeeeec-------ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 3 11111111 01111 11111 3344444 44 35689999998875443
No 222
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.07 E-value=7.9 Score=35.26 Aligned_cols=142 Identities=6% Similarity=0.009 Sum_probs=73.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE---eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT---CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++..++.|+. ...+.+||..+++...+..... .-.++.. -++.+++.|+.+ ..+.+||..+.+-..
T Consensus 97 ~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 97 DGSKVFTASC--DKTAKMWDLSSNQAIQIAQHDA--PVKTIHWIKAPNYSCVMTGSWD-------KTLKFWDTRSSNPMM 165 (368)
T ss_dssp TSSEEEEEET--TSEEEEEETTTTEEEEEEECSS--CEEEEEEEECSSCEEEEEEETT-------SEEEEECSSCSSCSE
T ss_pred CCCEEEEEcC--CCcEEEEEcCCCCceeeccccC--ceEEEEEEeCCCCCEEEEccCC-------CcEEEEECCCCcEEE
Confidence 4545555542 3579999999888655432221 1122222 256666776644 258889988765211
Q ss_pred CCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEE-CC----E
Q 013797 264 LPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVV-NN----E 336 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~-~g----~ 336 (436)
. +.............+.+++.++ ...+..||.... .+..+.... ......+... +. .
T Consensus 166 ~--~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 229 (368)
T 3mmy_A 166 V--LQLPERCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIESPL-------KHQHRCVAIFKDKQNKPT 229 (368)
T ss_dssp E--EECSSCEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECCCSC-------SSCEEEEEEEECTTSCEE
T ss_pred E--EecCCCceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhccccc-------cCCCceEEEcccCCCCCC
Confidence 1 1111122233344555544432 334678888765 344333221 1111112221 22 3
Q ss_pred EEEEecCCCeEEEEECCCC
Q 013797 337 LYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~~~ 355 (436)
.++.++..+.+.+||....
T Consensus 230 ~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 230 GFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEEEETTSEEEEEESSCS
T ss_pred eEEEecCCCcEEEEecCCC
Confidence 3667777889999998875
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.97 E-value=3.1 Score=46.05 Aligned_cols=182 Identities=14% Similarity=0.078 Sum_probs=89.9
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG 266 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~ 266 (436)
++..+++|+. ...+.+||..+++......-...........-++..++.|+.++ .+.+||..++....+..
T Consensus 972 ~g~~l~~g~~--~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg-------~i~vwd~~~~~~~~~~~ 1042 (1249)
T 3sfz_A 972 HLEYVAFGDE--DGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS-------VIQVWNWQTGDYVFLQA 1042 (1249)
T ss_dssp TSSEEEEEET--TSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS-------BEEEEETTTTEEECCBC
T ss_pred CCCEEEEEcC--CCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC-------EEEEEECCCCceEEEec
Confidence 4455555543 34688899887764332111111111111222556666666432 48889998887654322
Q ss_pred CccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEE-cCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCC
Q 013797 267 MRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH-IPDILKDFPAETGKSPPLIAVVNNELYSLETSSN 345 (436)
Q Consensus 267 ~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~ 345 (436)
... .-...+...+..++.++. ...+..||..+++-.. +.... ..-......-+++.++.++..+
T Consensus 1043 ~~~--~v~~~~~~~~~~l~~~~~------dg~v~vwd~~~~~~~~~~~~~~-------~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A 1043 HQE--TVKDFRLLQDSRLLSWSF------DGTVKVWNVITGRIERDFTCHQ-------GTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp CSS--CEEEEEECSSSEEEEEES------SSEEEEEETTTTCCCEEEECCS-------SCCCCEEECSSSSSCEEECCSS
T ss_pred CCC--cEEEEEEcCCCcEEEEEC------CCcEEEEECCCCceeEEEcccC-------CcEEEEEECCCCCEEEEEcCCC
Confidence 111 111222333333445543 3468899988775321 11111 1111112223667777787788
Q ss_pred eEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 346 ELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 346 ~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
.|.+||..+.+ .+..+.. .......++ ...++++++.|+.++ .+.+|
T Consensus 1108 ~v~iwd~~~~~--~~~~l~~--h~~~v~~~~-~s~dg~~lat~~~dg----~i~vw 1154 (1249)
T 3sfz_A 1108 TAKIWSFDLLS--PLHELKG--HNGCVRCSA-FSLDGILLATGDDNG----EIRIW 1154 (1249)
T ss_dssp CCCEECSSSSS--CSBCCCC--CSSCEEEEE-ECSSSSEEEEEETTS----CCCEE
T ss_pred cEEEEECCCcc--eeeeecc--CCCcEEEEE-ECCCCCEEEEEeCCC----EEEEE
Confidence 89999987653 2222211 001111122 134677778887763 45566
No 224
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=89.89 E-value=14 Score=37.79 Aligned_cols=146 Identities=12% Similarity=0.108 Sum_probs=71.2
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCC-CCCCCcccEEEEe--CC--EEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPS-MRRPRCLFASATC--GT--FAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~-~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
++..++.|+. ...+.+||.....-..+.. ....+....++.+ ++ ..++.|+.++ .+.+||..+.+-
T Consensus 483 ~~~~l~s~s~--D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-------~v~vwd~~~~~~ 553 (694)
T 3dm0_A 483 DNRQIVSASR--DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-------TVKVWNLSNCKL 553 (694)
T ss_dssp TSSCEEEEET--TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-------CEEEEETTTCCE
T ss_pred CCCEEEEEeC--CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-------eEEEEECCCCcE
Confidence 4445555543 3467888876543222222 1112222233333 22 3455555432 488899887654
Q ss_pred EeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEE
Q 013797 262 DSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYS 339 (436)
Q Consensus 262 ~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv 339 (436)
... +.........+.+ ++++++.|+.+ ..+..||+.+++-. ..+. .......++...+..++
T Consensus 554 ~~~--~~~h~~~v~~v~~spdg~~l~sg~~D------g~i~iwd~~~~~~~--~~~~------~~~~v~~~~~sp~~~~l 617 (694)
T 3dm0_A 554 RST--LAGHTGYVSTVAVSPDGSLCASGGKD------GVVLLWDLAEGKKL--YSLE------ANSVIHALCFSPNRYWL 617 (694)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT------SBCEEEETTTTEEE--ECCB------CSSCEEEEEECSSSSEE
T ss_pred EEE--EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCceE--EEec------CCCcEEEEEEcCCCcEE
Confidence 321 1111111122222 67777777744 34688998877532 2222 11111223333333344
Q ss_pred EecCCCeEEEEECCCCcE
Q 013797 340 LETSSNELRVYLKDSNSW 357 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~~W 357 (436)
..+..+.|.+||..++.-
T Consensus 618 ~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 618 CAATEHGIKIWDLESKSI 635 (694)
T ss_dssp EEEETTEEEEEETTTTEE
T ss_pred EEEcCCCEEEEECCCCCC
Confidence 444567799999987654
No 225
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.76 E-value=14 Score=34.94 Aligned_cols=159 Identities=12% Similarity=0.046 Sum_probs=83.2
Q ss_pred CCEEEEEceecCCCeEEEEECCC--CCEEeCCCCCCCCcccEEEEe---CCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELET--NNWFKGPSMRRPRCLFASATC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t--~~W~~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.+.||+.. . .-+++++... .+|+.+.+.......++++.- .+.||+.+..... -.-+++.+-...+|
T Consensus 22 ~g~l~vgt-~---~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~----g~gl~~s~D~G~tW 93 (394)
T 3b7f_A 22 PVMLLVAT-I---KGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL----GPTVFRSDDGGGNW 93 (394)
T ss_dssp CCEEEEEE-T---TEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C----CEEEEEESSTTSCC
T ss_pred CCEEEEEe-c---CceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC----CccEEEeCCCCCCc
Confidence 45666643 1 2377777655 689876422222223333333 4678876532111 12466776667889
Q ss_pred EeCCCC---ccC--C-----cce--eEEEE----CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCC---CCCC---
Q 013797 262 DSLPGM---RQR--R-----KLC--SGCYM----DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDI---LKDF--- 319 (436)
Q Consensus 262 ~~~~~~---p~~--r-----~~~--~~~~~----~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~---~~~~--- 319 (436)
+.+... +.. + ... +.++. .+.||+.+. ...+++.+-...+|+.+... |...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~ 166 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWT 166 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHH
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccc
Confidence 988532 211 1 011 12222 467887642 23578887778899987532 1000
Q ss_pred -----CCCCCCCCCEEEEE---CCEEEEEecCCCeEEEEECCCCcEEEcc
Q 013797 320 -----PAETGKSPPLIAVV---NNELYSLETSSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 320 -----~~~~~r~~~~~~~~---~g~lyv~gg~~~~i~~yd~~~~~W~~v~ 361 (436)
..+.....+.+++. .+.||+... .+.+++.+-..++|+.+.
T Consensus 167 ~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~ 215 (394)
T 3b7f_A 167 GGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLN 215 (394)
T ss_dssp CCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTSSCEECC
T ss_pred cccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCCCceECC
Confidence 00001111233332 257877643 346888888889999985
No 226
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=89.66 E-value=3 Score=36.54 Aligned_cols=146 Identities=8% Similarity=-0.036 Sum_probs=77.7
Q ss_pred eCCEEEEEceecCCCeEEEEEC------C---------CCCEEeCCCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCcc
Q 013797 186 AGTHLIVSGNEIEGGVIWRYEL------E---------TNNWFKGPSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVL 248 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp------~---------t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 248 (436)
..|.+|+|-| ..+|+++. . +..|..||..+......-++. .++++|++-|.
T Consensus 12 ~~ge~~fFk~----~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg~-------- 79 (225)
T 3oyo_A 12 SEYEVYFFAK----NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSGN-------- 79 (225)
T ss_dssp STTEEEEEET----TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEETT--------
T ss_pred CCCEEEEEEC----CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcCC--------
Confidence 4789999855 36788872 1 222444443222112222222 58999999662
Q ss_pred ceEEEEeCCCCC--eEeC----------CCCccC--CcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEE
Q 013797 249 NSAERYNPETKS--WDSL----------PGMRQR--RKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH 311 (436)
Q Consensus 249 ~~~~~yd~~t~~--W~~~----------~~~p~~--r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~ 311 (436)
.+++||..+++ -... +.+|.. .....|++. ++++|++-| +..++||..+++-..
T Consensus 80 -~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 80 -HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp -EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--------TEEEEEETTTTEEEE
T ss_pred -EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--------CeEEEEECCCCeecC
Confidence 47888764321 1111 122220 112344443 789999976 357899977765543
Q ss_pred c----C-CCCCCCCCCCCCCCCEEEE--ECCEEEEEecCCCeEEEEECCC
Q 013797 312 I----P-DILKDFPAETGKSPPLIAV--VNNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 312 v----~-~~~~~~~~~~~r~~~~~~~--~~g~lyv~gg~~~~i~~yd~~~ 354 (436)
- . ..|.......+....++.. .++++|++-| +..|+||..+
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr~d~~~ 198 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--QNYVRIDFTP 198 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEEEECCT
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCCc
Confidence 1 1 1110000000222233333 2689999976 7899999983
No 227
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.17 E-value=11 Score=33.27 Aligned_cols=176 Identities=7% Similarity=-0.008 Sum_probs=79.0
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCC-EEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNN-WFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~-W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+..-........... . ......++.+++.|+. ...+.+|+..... .+.+..+..........
T Consensus 37 ~dg~v~vw~~~~~~~~~~~~~~~~~v--~--~~~~~~~~~~l~~~~~--dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 110 (313)
T 3odt_A 37 RDGTVRLWSKDDQWLGTVVYTGQGFL--N--SVCYDSEKELLLFGGK--DTMINGVPLFATSGEDPLYTLIGHQGNVCSL 110 (313)
T ss_dssp TTSEEEEEEESSSEEEEEEEECSSCE--E--EEEEETTTTEEEEEET--TSCEEEEETTCCTTSCC-CEECCCSSCEEEE
T ss_pred cCCcEEEEECCCCEEEEEeecCCccE--E--EEEECCCCCEEEEecC--CCeEEEEEeeecCCCCcccchhhcccCEEEE
Confidence 35567788876654332211111100 0 0112235555555553 3457777765432 11122222222222333
Q ss_pred EeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEE-EE-CCEEEEEeccCCCCCcCCEEEEEECCC
Q 013797 229 TCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGC-YM-DNKFYVIGGRNEKDKPLTCGEAYDEYA 306 (436)
Q Consensus 229 ~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~ 306 (436)
.+++..++.|+.+ ..+.+||........... . . .-.... .- ++.+++.++.+ ..+..||..+
T Consensus 111 ~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~-~-~-~v~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~ 174 (313)
T 3odt_A 111 SFQDGVVISGSWD-------KTAKVWKEGSLVYNLQAH-N-A-SVWDAKVVSFSENKFLTASAD------KTIKLWQNDK 174 (313)
T ss_dssp EEETTEEEEEETT-------SEEEEEETTEEEEEEECC-S-S-CEEEEEEEETTTTEEEEEETT------SCEEEEETTE
T ss_pred EecCCEEEEEeCC-------CCEEEEcCCcEEEecccC-C-C-ceeEEEEccCCCCEEEEEECC------CCEEEEecCc
Confidence 3455566666543 247778832222211111 1 1 111122 22 56666666643 3478888332
Q ss_pred CcEEEcCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCCc
Q 013797 307 GTWYHIPDILKDFPAETGKSPPLIA-VVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 307 ~~W~~v~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.. ..+.... .. ....++ .-++. ++.++..+.|.+||..+.+
T Consensus 175 ~~-~~~~~~~------~~-~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 175 VI-KTFSGIH------ND-VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp EE-EEECSSC------SS-CEEEEEEEETTE-EEEEETTSEEEEEETTTCC
T ss_pred eE-EEEeccC------cc-cEEEEEEcCCCe-EEEccCCCeEEEEECCchh
Confidence 22 2222111 01 111222 23667 6677778899999998754
No 228
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.99 E-value=13 Score=33.58 Aligned_cols=186 Identities=8% Similarity=0.000 Sum_probs=89.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCC----EEeCCCCCCCCcccEEEEe-CCE-EEEEcCcCCCCCCccceEEEEeC-CCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNN----WFKGPSMRRPRCLFASATC-GTF-AFVAGGHGMDGSGVLNSAERYNP-ETK 259 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~----W~~l~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~-~t~ 259 (436)
++.+++.|+. ...+.+||..+++ -..+.. ....-.+++.. ++. .++.|+.++ .+.+||. .++
T Consensus 22 ~~~~l~~~~~--d~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~~wd~~~~~ 90 (342)
T 1yfq_A 22 SKSLLLITSW--DGSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQG-------EILKVDLIGSP 90 (342)
T ss_dssp GGTEEEEEET--TSEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETTS-------CEEEECSSSSS
T ss_pred CCCEEEEEcC--CCeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCCC-------eEEEEEeccCC
Confidence 3444444442 3467788877665 333221 11112222222 566 666666442 4889999 888
Q ss_pred CeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCC---c----EEEcCCCCCCCCCCCCCCCCEEEE
Q 013797 260 SWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG---T----WYHIPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 260 ~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~---~----W~~v~~~~~~~~~~~~r~~~~~~~ 332 (436)
.-..+...+....-.+.+...+.+++.++. -..+..||+.+. . ...+..+. .......+..
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~ 158 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYGDDKLIAASW------DGLIEVIDPRNYGDGVIAVKNLNSNNTK------VKNKIFTMDT 158 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEETTTEEEEEET------TSEEEEECHHHHTTBCEEEEESCSSSSS------SCCCEEEEEE
T ss_pred ceEeccccCCCCceEEEEeCCCCEEEEEcC------CCeEEEEcccccccccccccCCeeeEEe------eCCceEEEEe
Confidence 766554311111112233333555556653 346788887640 0 11222221 1111122333
Q ss_pred ECCEEEEEecCCCeEEEEECCC-Cc--EEEcccCCCccCCCCCceEEEEEe-CCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 333 VNNELYSLETSSNELRVYLKDS-NS--WKNLGLVPVRADFNRGWGIAFKSL-GNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 333 ~~g~lyv~gg~~~~i~~yd~~~-~~--W~~v~~~p~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
..+. +++++..+.|.+||..+ .. ...... +. ......+++ .. ++.++++|+.+ ..+.+|.++.
T Consensus 159 ~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~---~~~i~~i~~-~~~~~~~l~~~~~d----g~i~i~~~~~ 225 (342)
T 1yfq_A 159 NSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES-GL---KYQIRDVAL-LPKEQEGYACSSID----GRVAVEFFDD 225 (342)
T ss_dssp CSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC-SC---SSCEEEEEE-CSGGGCEEEEEETT----SEEEEEECCT
T ss_pred cCCc-EEEEeCCCeEEEEECCccccccceeeec-CC---CCceeEEEE-CCCCCCEEEEEecC----CcEEEEEEcC
Confidence 3445 66666678999999987 33 222211 10 011111221 22 46677777765 3566765554
No 229
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=88.99 E-value=13 Score=34.49 Aligned_cols=211 Identities=12% Similarity=-0.022 Sum_probs=103.7
Q ss_pred cCCeEEEecc--CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEceecCCCeEEEEECCCCCEEeCC
Q 013797 140 REPSVFMLAS--GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNEIEGGVIWRYELETNNWFKGP 216 (436)
Q Consensus 140 ~~~~l~~~~~--~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~v~~ydp~t~~W~~l~ 216 (436)
....+.+... +..+++.+|+.+.+-..+...+....... ..+-++ .|++... ...++++|+.+++-+.+.
T Consensus 46 Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~----~~spdg~~l~~~~~---~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 46 DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGG----FLSPDDDALFYVKD---GRNLMRVDLATLEENVVY 118 (388)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSC----EECTTSSEEEEEET---TTEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccce----EEcCCCCEEEEEeC---CCeEEEEECCCCcceeee
Confidence 3344444433 33468999999888877765443222111 233344 4444432 257999999998876655
Q ss_pred CCCCCCcccEEE--EeCCEEEEEcCcCCC---------------CCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE
Q 013797 217 SMRRPRCLFASA--TCGTFAFVAGGHGMD---------------GSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM 279 (436)
Q Consensus 217 ~~p~~r~~~~~~--~~~~~iyv~GG~~~~---------------~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 279 (436)
..+......... .-+++.++.-..... .......++++|+.+++-+.+...+ ....+....-
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-QWLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-ccccccEECC
Confidence 444332211111 123433331100000 0002357899999988765553211 1111222222
Q ss_pred -CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecC--C--CeEEEEEC
Q 013797 280 -DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNE-LYSLETS--S--NELRVYLK 352 (436)
Q Consensus 280 -~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~--~--~~i~~yd~ 352 (436)
+|+..++............++.+|..+.....+..... .......+. -+|+ |+.+... . ..|++||+
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE------GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT------TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC------CcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 45544333222211124578999998877666654321 000001111 1454 5443321 1 24999999
Q ss_pred CCCcEEEcccCC
Q 013797 353 DSNSWKNLGLVP 364 (436)
Q Consensus 353 ~~~~W~~v~~~p 364 (436)
++++-+.+..++
T Consensus 272 ~~g~~~~l~~~~ 283 (388)
T 3pe7_A 272 ETLENRQLTSMP 283 (388)
T ss_dssp TTCCEEEEEEEC
T ss_pred CCCceEEEEcCC
Confidence 998877765444
No 230
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.95 E-value=6.5 Score=40.99 Aligned_cols=138 Identities=13% Similarity=0.029 Sum_probs=76.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC-CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP-RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
+|.|++++|.. .-+++||+.+++++....-... .....+... ++.|++.. .. -+.+||+.+++++.
T Consensus 482 ~g~lWi~~~t~--~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~~--------Gl~~~~~~~~~~~~ 550 (758)
T 3ott_A 482 EGNVWVLLYNN--KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-HG--------GVMRINPKDESQQS 550 (758)
T ss_dssp TSCEEEEETTC--SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-TT--------EEEEECC--CCCCB
T ss_pred CCCEEEEccCC--CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-cC--------ceEEEecCCCceEE
Confidence 67788855433 3589999999998876421111 111122222 56787653 21 27889999888766
Q ss_pred CC--CCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEE
Q 013797 264 LP--GMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYS 339 (436)
Q Consensus 264 ~~--~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv 339 (436)
.. .+|... -.+.+.-+|.|++.. .+.+.+||+.+.+..... ++. .... .++.. +|.||+
T Consensus 551 ~~~~gl~~~~-i~~i~~~~g~lWi~t--------~~Gl~~~~~~~~~~~~~~-~~~------~~~~-~~~~~~~~G~l~f 613 (758)
T 3ott_A 551 ISFGSFSNNE-ILSMTCVKNSIWVST--------TNGLWIIDRKTMDARQQN-MTN------KRFT-SLLFDPKEDCVYL 613 (758)
T ss_dssp CCCCC---CC-EEEEEEETTEEEEEE--------SSCEEEEETTTCCEEEC---CC------CCCS-EEEEETTTTEEEE
T ss_pred ecccCCCccc-eEEEEECCCCEEEEC--------CCCeEEEcCCCceeEEec-CCC------Ccee-eeEEECCCCcEEE
Confidence 52 233221 223334578887754 234799999999877643 221 1111 23333 677776
Q ss_pred EecCCCeEEEEECCC
Q 013797 340 LETSSNELRVYLKDS 354 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~ 354 (436)
-+ .+.+..+||+.
T Consensus 614 G~--~~Gl~~f~p~~ 626 (758)
T 3ott_A 614 GG--ADGFGISHSNL 626 (758)
T ss_dssp EC--BSEEEEEEC--
T ss_pred ec--CCceEEEChhh
Confidence 54 36788888864
No 231
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=88.64 E-value=15 Score=33.82 Aligned_cols=145 Identities=14% Similarity=0.037 Sum_probs=85.7
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeC--CCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKG--PSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l--~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.++.||+... ....++++++....-+.+ ..+..|+ .+++ .++.||+..-. ....++++++....=
T Consensus 89 ~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~~~~~~~P~---giavdp~~g~ly~td~~------~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 89 LGEKLYWTDS--ETNRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWG------EVPKIERAGMDGSSR 157 (318)
T ss_dssp TTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSSEE---EEEEEGGGTEEEEEECS------SSCEEEEEETTSCSC
T ss_pred CCCeEEEEEC--CCCEEEEEECCCCcEEEEEeCCCCCcc---EEEEeCCCCEEEEEecC------CCCEEEEEEcCCCCe
Confidence 4789998742 335789999876543333 2222222 3333 36899998521 124689998864332
Q ss_pred EeCCCCccCCcce-eEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 262 DSLPGMRQRRKLC-SGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 262 ~~~~~~p~~r~~~-~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
+.+... ....+ +.++- +++||+... ....|+++|+....-+.+.... .....++++.++.+|
T Consensus 158 ~~~~~~--~l~~Pnglavd~~~~~lY~aD~------~~~~I~~~d~dG~~~~~~~~~~-------~~~P~glav~~~~ly 222 (318)
T 3sov_A 158 FIIINS--EIYWPNGLTLDYEEQKLYWADA------KLNFIHKSNLDGTNRQAVVKGS-------LPHPFALTLFEDILY 222 (318)
T ss_dssp EEEECS--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSC-------CSCEEEEEEETTEEE
T ss_pred EEEEEC--CCCCccEEEEeccCCEEEEEEC------CCCEEEEEcCCCCceEEEecCC-------CCCceEEEEeCCEEE
Confidence 222111 11122 33333 689999864 3567999998754333332211 112345777889999
Q ss_pred EEecCCCeEEEEECCCCc
Q 013797 339 SLETSSNELRVYLKDSNS 356 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~ 356 (436)
+.....+.|.++|+.+.+
T Consensus 223 wtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 223 WTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EEecCCCeEEEEECCCCC
Confidence 998777899999996554
No 232
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=88.52 E-value=9.1 Score=37.31 Aligned_cols=150 Identities=13% Similarity=0.054 Sum_probs=79.9
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCCCEEe--C----CCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETNNWFK--G----PSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAER 253 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~--l----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~ 253 (436)
++....|.+|+|-| ..+|+++.....+.. + +.+|.. .-++.. .++++|++=|. .+|+
T Consensus 267 Ai~~~~ge~y~Fkg----~~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg~---------~~W~ 331 (450)
T 1su3_A 267 AITTIRGEVMFFKD----RFYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKGN---------KYWA 331 (450)
T ss_dssp EEEEETTEEEEEET----TEEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEETT---------EEEE
T ss_pred eEEecCCeEEEEeC----CEEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeCC---------EEEE
Confidence 46678999999965 357777765433211 1 122321 123333 36899998553 3677
Q ss_pred EeCCCC--Ce-EeCC---CCccCCcceeEE-EE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCC----CC
Q 013797 254 YNPETK--SW-DSLP---GMRQRRKLCSGC-YM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKD----FP 320 (436)
Q Consensus 254 yd~~t~--~W-~~~~---~~p~~r~~~~~~-~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~----~~ 320 (436)
|+..+- .+ +.+. .+|..-....++ .. ++++|+|-| +..++||..+.+-. +.-|.. .+
T Consensus 332 ~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~~~~--~gYPk~I~~~fp 401 (450)
T 1su3_A 332 VQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKRSMD--PGYPKMIAHDFP 401 (450)
T ss_dssp EETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEEC--SSCSEEHHHHST
T ss_pred ecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCcccc--CCCCcchhhcCC
Confidence 764321 00 0010 112111122333 33 689999976 45799997654321 111100 00
Q ss_pred CCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEE
Q 013797 321 AETGKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 321 ~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
. .+...-+++..+|++|.+-| +..|+||..+.+=..
T Consensus 402 g-ip~~iDAA~~~~g~~YFFkg--~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 402 G-IGHKVDAVFMKDGFFYFFHG--TRQYKFDPKTKRILT 437 (450)
T ss_dssp T-SCSCCSEEEEETTEEEEEET--TEEEEEETTTTEEEE
T ss_pred C-CCCCccEEEEcCCeEEEEeC--CEEEEEECCcceEec
Confidence 0 12223345557899999976 689999998765443
No 233
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.25 E-value=4.2 Score=44.90 Aligned_cols=177 Identities=8% Similarity=0.013 Sum_probs=87.6
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC 230 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~ 230 (436)
...+..||..+.+...... .+..... ......++..++.|+. ...+.+||..+++...+.... .....+...
T Consensus 982 ~g~i~i~d~~~~~~~~~~~--~h~~~v~--~l~~s~dg~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~--~~v~~~~~~ 1053 (1249)
T 3sfz_A 982 DGAIKIIELPNNRVFSSGV--GHKKAVR--HIQFTADGKTLISSSE--DSVIQVWNWQTGDYVFLQAHQ--ETVKDFRLL 1053 (1249)
T ss_dssp TSCCEEEETTTTSCEEECC--CCSSCCC--CEEECSSSSCEEEECS--SSBEEEEETTTTEEECCBCCS--SCEEEEEEC
T ss_pred CCCEEEEEcCCCceeeecc--cCCCceE--EEEECCCCCEEEEEcC--CCEEEEEECCCCceEEEecCC--CcEEEEEEc
Confidence 4456677776654332211 1111000 0122335555555543 357999999998876544322 112223333
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEE
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~ 310 (436)
.+..++.++.+ ..+.+||..+++-...-..........+..-++++++.|+.++ .+..||..+.+
T Consensus 1054 ~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~------~v~iwd~~~~~-- 1118 (1249)
T 3sfz_A 1054 QDSRLLSWSFD-------GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK------TAKIWSFDLLS-- 1118 (1249)
T ss_dssp SSSEEEEEESS-------SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS------CCCEECSSSSS--
T ss_pred CCCcEEEEECC-------CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCcc--
Confidence 33334455433 2588899887753211000111111112223666677776443 35778876654
Q ss_pred EcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCc
Q 013797 311 HIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 311 ~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+..+. ........+.+ ++++++.|+..+.|.+||..+.+
T Consensus 1119 ~~~~l~------~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1119 PLHELK------GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CSBCCC------CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred eeeeec------cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 122222 11111112222 67788888878889999998754
No 234
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.17 E-value=25 Score=35.86 Aligned_cols=181 Identities=13% Similarity=0.003 Sum_probs=103.1
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeC--CC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKG--PS 217 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l--~~ 217 (436)
..+|+.-.....++.+++.......+.......+ . .++. .++.||+... ....++++++....-+.+ ..
T Consensus 49 ~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P--~---GlAvD~~~~~LY~tD~--~~~~I~v~~~dG~~~~~l~~~~ 121 (628)
T 4a0p_A 49 NRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP--E---GMAVDWLGKNLYWADT--GTNRIEVSKLDGQHRQVLVWKD 121 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC--C---EEEEETTTTEEEEEET--TTTEEEEEETTSTTCEEEECSS
T ss_pred CEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc--c---eEEEEeCCCEEEEEEC--CCCEEEEEecCCCcEEEEEeCC
Confidence 3444443345567777776544443322111111 1 1333 4789999742 346899999865542222 22
Q ss_pred CCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE---CCEEEEEeccCCC
Q 013797 218 MRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM---DNKFYVIGGRNEK 292 (436)
Q Consensus 218 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~ 292 (436)
+..|+ .+++- ++.||+.--. ....++++++....-+.+.. ....+.+..+ +++||+...
T Consensus 122 l~~P~---~iavdp~~G~lY~tD~g------~~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~---- 185 (628)
T 4a0p_A 122 LDSPR---ALALDPAEGFMYWTEWG------GKPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAKRRLYWTDL---- 185 (628)
T ss_dssp CCCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTTTEEEEEET----
T ss_pred CCCcc---cEEEccCCCeEEEeCCC------CCCEEEEEeCCCCceEEEEC---CCCCcceEEEccccCEEEEEEC----
Confidence 33332 34443 6899998421 13468889887655443321 1222333333 589999874
Q ss_pred CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC
Q 013797 293 DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 293 ~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
..+.|+++|+....=+.+.... ....++++.++.||+.....+.|++.|..++
T Consensus 186 --~~~~I~~~d~dG~~~~v~~~~l--------~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 186 --DTNLIESSNMLGLNREVIADDL--------PHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp --TTTEEEEEETTSCSCEEEEECC--------SCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred --CCCEEEEEcCCCCceEEeeccC--------CCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 3567899998754323332211 1234678889999999877788999987654
No 235
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.00 E-value=19 Score=34.39 Aligned_cols=150 Identities=11% Similarity=-0.035 Sum_probs=75.0
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEe--CCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFK--GPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~--l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
+.+++.|+. ...+.+||..+.+... +.... ......+.. ++..++.|+.+ ..+.+||..+++....-
T Consensus 210 ~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~s-d~~~l~s~~~d-------~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 210 HQFIITSDR--DEHIKISHYPQCFIVDKWLFGHK-HFVSSICCG-KDYLLLSAGGD-------DKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp CEEEEEEET--TSCEEEEEESCTTCEEEECCCCS-SCEEEEEEC-STTEEEEEESS-------SEEEEEETTTCCEEEEE
T ss_pred CcEEEEEcC--CCcEEEEECCCCceeeeeecCCC-CceEEEEEC-CCCEEEEEeCC-------CeEEEEECCCCcEeeee
Confidence 667777654 3578889987765322 21111 111111122 66666666643 35888999887643211
Q ss_pred CCc-------------c---------CC-cceeEEEE--CCEEEEEeccCCCCCcCCEEEEEEC--CC-CcEEEcCCCCC
Q 013797 266 GMR-------------Q---------RR-KLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDE--YA-GTWYHIPDILK 317 (436)
Q Consensus 266 ~~p-------------~---------~r-~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~--~~-~~W~~v~~~~~ 317 (436)
... . .. .....+.. ++++.++++. ....+.+||. .+ +++..+..+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-----~d~~i~iw~~~~~~~~~l~~~~~~~~ 353 (450)
T 2vdu_B 279 DYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE-----ATKCIIILEMSEKQKGDLALKQIITF 353 (450)
T ss_dssp ECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-----TCSEEEEEEECSSSTTCEEEEEEEEC
T ss_pred cchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-----CCCeEEEEEeccCCCCceeeccEecc
Confidence 100 0 00 01111122 3444444431 1346788887 33 45555554431
Q ss_pred CCCCCCCCCCCEEEEECCEEEEEecCC-------C--eEEEEECCCCcEEE
Q 013797 318 DFPAETGKSPPLIAVVNNELYSLETSS-------N--ELRVYLKDSNSWKN 359 (436)
Q Consensus 318 ~~~~~~~r~~~~~~~~~g~lyv~gg~~-------~--~i~~yd~~~~~W~~ 359 (436)
......++...+.+++..+.. + .++.++.+++.|+.
T Consensus 354 ------~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 354 ------PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp ------SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred ------CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 112233455567777765432 2 67777888888863
No 236
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.50 E-value=28 Score=35.69 Aligned_cols=107 Identities=6% Similarity=-0.151 Sum_probs=52.5
Q ss_pred eEEEEeCCC-CCeEeCCCC-ccCCc-ceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCC
Q 013797 250 SAERYNPET-KSWDSLPGM-RQRRK-LCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKS 326 (436)
Q Consensus 250 ~~~~yd~~t-~~W~~~~~~-p~~r~-~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~ 326 (436)
.++++|..+ ++-..+... ..... ...+. -+|+..++...+... ....++.+|+.+++...+........ ....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~--~~~~ 339 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASNQQRVLAHETSPTW--VPLH 339 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTCCEEEEEEEECSSC--CCCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCCceEEEEEcCCCCc--CCcC
Confidence 688889888 765544321 11111 11222 455544443322211 34678999999988766532211000 0000
Q ss_pred CCEEEEECCEEEEEecCC--CeEEEEECCCCcEEEcc
Q 013797 327 PPLIAVVNNELYSLETSS--NELRVYLKDSNSWKNLG 361 (436)
Q Consensus 327 ~~~~~~~~g~lyv~gg~~--~~i~~yd~~~~~W~~v~ 361 (436)
......-+|++++.+... ..|+.+|.... .+.+.
T Consensus 340 ~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp SCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred CceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 011122366766665443 36888887666 55553
No 237
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=87.24 E-value=19 Score=33.61 Aligned_cols=141 Identities=9% Similarity=0.005 Sum_probs=71.0
Q ss_pred CCeEEEEECCCCCEE--eCCCCCCCCcccEEEEe---CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-----CCCCc
Q 013797 199 GGVIWRYELETNNWF--KGPSMRRPRCLFASATC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-----LPGMR 268 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~--~l~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-----~~~~p 268 (436)
...+.+||..+..-. .++.+...........+ ++.+++.|+.+ ..+.+||..++.... +..+.
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEec
Confidence 357888987543211 11112111122222222 56677777644 258889988775421 11111
Q ss_pred cCCcceeEE-EE-CC-EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecC
Q 013797 269 QRRKLCSGC-YM-DN-KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETS 343 (436)
Q Consensus 269 ~~r~~~~~~-~~-~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~ 343 (436)
........+ .. ++ .+++.|+.+ ..+.+||+.+++....-.... .. .....+.. ++.+++.++.
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~-----~~-~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWDVGTGAAVLTLGPDV-----HP-DTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETT------SCEEEEETTTTEEEEEECTTT-----CC-SCEEEEEECTTSSCEEEEET
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEECCCCCccEEEecCC-----CC-CceEEEEECCCCCEEEEEec
Confidence 111111122 22 33 466667643 357899998876543221010 01 11112222 5777777777
Q ss_pred CCeEEEEECCCCcEE
Q 013797 344 SNELRVYLKDSNSWK 358 (436)
Q Consensus 344 ~~~i~~yd~~~~~W~ 358 (436)
.+.|.+||+.+.+-.
T Consensus 197 d~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVV 211 (402)
T ss_dssp TSEEEEEETTTTEEE
T ss_pred CCcEEEEeCCCCcee
Confidence 889999999886543
No 238
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=86.96 E-value=30 Score=35.51 Aligned_cols=190 Identities=11% Similarity=-0.028 Sum_probs=95.3
Q ss_pred eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEceecC-------------CCeEEEEECCCCCEE--eCC
Q 013797 153 SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNEIE-------------GGVIWRYELETNNWF--KGP 216 (436)
Q Consensus 153 ~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~-------------~~~v~~ydp~t~~W~--~l~ 216 (436)
.++.+|..+++......... .... ..-+-+| .|++...... ...+++++..+.+.. .+-
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~--~~~~---~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERV--KFSC---MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEE--CSCC---EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEECCCCCCCcccccCc--ccce---EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe
Confidence 78889998887665311000 0010 1122244 4544432211 245999999887632 221
Q ss_pred CCC-CCCcccEEEE-eCCE-EEEEcCcCCCCCCccceEEEEeCCC------C--CeEeCCCCccCCcceeEEEECCEEEE
Q 013797 217 SMR-RPRCLFASAT-CGTF-AFVAGGHGMDGSGVLNSAERYNPET------K--SWDSLPGMRQRRKLCSGCYMDNKFYV 285 (436)
Q Consensus 217 ~~p-~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~yd~~t------~--~W~~~~~~p~~r~~~~~~~~~g~iyv 285 (436)
..+ .+........ -+++ |++....... ..+.++++|..+ . .++.+....... ......-++.||+
T Consensus 227 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~ 302 (710)
T 2xdw_A 227 EFPDEPKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTF 302 (710)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEE
T ss_pred ccCCCCeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEE
Confidence 111 1222222222 2444 4444322211 145789999876 4 576664322211 1122234677888
Q ss_pred EeccCCCCCcCCEEEEEECCCC---cEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCC--CeEEEEECCCCc-EE
Q 013797 286 IGGRNEKDKPLTCGEAYDEYAG---TWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSS--NELRVYLKDSNS-WK 358 (436)
Q Consensus 286 ~gG~~~~~~~~~~v~~yD~~~~---~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~--~~i~~yd~~~~~-W~ 358 (436)
.+..+. ....++.+|+.+. .|+.+.+... ......+... ++.+++..... ..|+++|+.+++ .+
T Consensus 303 ~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 303 KTNRHS---PNYRLINIDFTDPEESKWKVLVPEHE------KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp EECTTC---TTCEEEEEETTSCCGGGCEEEECCCS------SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCC---CCCEEEEEeCCCCCcccceeccCCCC------CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEE
Confidence 865332 2457899999876 5887754321 0111223445 67777765432 368899985554 44
Q ss_pred Ec
Q 013797 359 NL 360 (436)
Q Consensus 359 ~v 360 (436)
.+
T Consensus 374 ~l 375 (710)
T 2xdw_A 374 IF 375 (710)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 239
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.79 E-value=13 Score=35.52 Aligned_cols=141 Identities=7% Similarity=0.019 Sum_probs=68.4
Q ss_pred EEEEceecCCCeEEEEECCCCC---EE--eCCCCC-CCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC-
Q 013797 190 LIVSGNEIEGGVIWRYELETNN---WF--KGPSMR-RPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS- 260 (436)
Q Consensus 190 iyv~GG~~~~~~v~~ydp~t~~---W~--~l~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~- 260 (436)
+++.|+. ...+.+||..+.. +. ....+. ....-..++.. ++.+++.|+.+ ..+.+||..+..
T Consensus 196 ~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-------g~i~i~d~~~~~~ 266 (430)
T 2xyi_A 196 YLLSASD--DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-------QKLMIWDTRNNNT 266 (430)
T ss_dssp EEEEECT--TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCSCS
T ss_pred eEEEEeC--CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-------CeEEEEECCCCCC
Confidence 5555543 3468889988732 11 111111 11112222222 45677666543 358899998652
Q ss_pred eEeCCCCccCCcceeEEEE--CC-EEEEEeccCCCCCcCCEEEEEECCCCc--EEEcCCCCCCCCCCCCCCCCEEEEE--
Q 013797 261 WDSLPGMRQRRKLCSGCYM--DN-KFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIPDILKDFPAETGKSPPLIAVV-- 333 (436)
Q Consensus 261 W~~~~~~p~~r~~~~~~~~--~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~~~~~~~~~~~~r~~~~~~~~-- 333 (436)
...+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.. -..+... ......+..
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h---------~~~v~~i~~sp 331 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESH---------KDEIFQVQWSP 331 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECC---------SSCEEEEEECS
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecC---------CCCEEEEEECC
Confidence 1111111111111122222 23 377777743 468899987632 1111110 011111222
Q ss_pred CC-EEEEEecCCCeEEEEECCC
Q 013797 334 NN-ELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 334 ~g-~lyv~gg~~~~i~~yd~~~ 354 (436)
++ .+++.++..+.|.+||...
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCEEEEEeCCCcEEEEeCCC
Confidence 23 5788887788999999876
No 240
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.72 E-value=20 Score=33.28 Aligned_cols=179 Identities=7% Similarity=-0.038 Sum_probs=91.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE-
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT- 229 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~- 229 (436)
...+..+|+.+.+.......... .......-++.+++.++ ...+.+++..+++-...............+.
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~~-----V~~v~fspdg~~l~s~s---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRGE-----VKDLHFSTDGKVVAYIT---GSSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC-----CCEEEECTTSSEEEEEC---SSCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CCEEEEeECCCCcEEEEeCCCCc-----eEEEEEccCCceEEecc---ceeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 35678889887765432211110 10112233566555554 2457788888776543322221121122222
Q ss_pred -eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC--CccCCcceeEEE--ECCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 230 -CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG--MRQRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 230 -~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
-++..++.++.++.. ...+..+|........... +........++. -+|++.+.|+.+ ..|.+||.
T Consensus 228 spdg~~l~~~s~d~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D------~~V~iwd~ 298 (365)
T 4h5i_A 228 IADDTVLIAASLKKGK---GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND------NSIALVKL 298 (365)
T ss_dssp EETTEEEEEEEESSSC---CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT------SCEEEEET
T ss_pred cCCCCEEEEEecCCcc---eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC------CEEEEEEC
Confidence 367777777655432 2245667766555433211 111111112222 278888888754 35889999
Q ss_pred CCCcEEEcCCCCCCCCCCCCCCCC-EEEEE--CCEEEEEecCCCeEEEEECCC
Q 013797 305 YAGTWYHIPDILKDFPAETGKSPP-LIAVV--NNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 305 ~~~~W~~v~~~~~~~~~~~~r~~~-~~~~~--~g~lyv~gg~~~~i~~yd~~~ 354 (436)
.+.+-. ..+. ..+... ..+.+ +|++++.|+..+.|.+||+..
T Consensus 299 ~~~~~~--~~~~------~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 299 KDLSMS--KIFK------QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTTEEE--EEET------TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCcEE--EEec------CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 876532 2211 111111 12222 788888888889999999754
No 241
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=86.60 E-value=14 Score=31.48 Aligned_cols=145 Identities=10% Similarity=0.045 Sum_probs=75.4
Q ss_pred eEEeCCEEEEEceecCCCeEEEEECCCCC--E-EeC----CCCCCCCcccEEE-EeCCEEEEEcCcCCCCCCccceEEEE
Q 013797 183 SLCAGTHLIVSGNEIEGGVIWRYELETNN--W-FKG----PSMRRPRCLFASA-TCGTFAFVAGGHGMDGSGVLNSAERY 254 (436)
Q Consensus 183 ~~~~~~~iyv~GG~~~~~~v~~ydp~t~~--W-~~l----~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~y 254 (436)
+....+.+|+|-| ..+|+++..... . +.+ +.+|. ..-|+. ..++++|++-|. ..++|
T Consensus 11 ~~~~~g~~~fFkg----~~~w~~~~~~~~~gyP~~I~~~w~glP~--~iDAa~~~~~g~~yfFkg~---------~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE----RWFWRVRNNQVMDGYPMPIGQFWRGLPA--SINTAYERKDGKFVFFKGD---------KHWVF 75 (196)
T ss_dssp EEEETTEEEEEET----TEEEEEETTEECTTCSEEHHHHSTTCCS--SCCEEEECTTSCEEEEETT---------EEEEE
T ss_pred EEEcCCEEEEEEC----CEEEEEECCccCCCCceEhhHhccCCCC--CccEEEEeCCCcEEEecCC---------EEEEE
Confidence 5567899999965 368888643210 0 111 12332 112222 247889988652 36788
Q ss_pred eCCCCCe---EeCC----CCccCCcceeEEE-E--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCC-C-C
Q 013797 255 NPETKSW---DSLP----GMRQRRKLCSGCY-M--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFP-A-E 322 (436)
Q Consensus 255 d~~t~~W---~~~~----~~p~~r~~~~~~~-~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~-~-~ 322 (436)
+..+... +.+. .+|.. ...+++ . ++++|.+-| +..++||..+++-.. .-|.... . -
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~--~IDAA~~~~~~g~~yfFkG--------~~yw~yd~~~~~v~~--gyPk~i~~~~g 143 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTD--KIDAALFWMPNGKTYFFRG--------NKYYRFNEELRAVDS--EYPKNIKVWEG 143 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSS--CCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECT--TCSEEGGGSBT
T ss_pred eCCcccCCCCeEhhhcCCCCCCC--cccEEEEEccCCEEEEEEC--------CEEEEEeCCcccccC--CCCccHHHCCC
Confidence 7542110 1121 12322 233443 2 689999976 356899987754211 1110000 0 0
Q ss_pred CCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCc
Q 013797 323 TGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 323 ~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+....++... ++ ++|.+-| +..++||..+++
T Consensus 144 ip~~idaAf~~~~~~~~YfFkg--~~y~r~d~~~~~ 177 (196)
T 3c7x_A 144 IPESPRGSFMGSDEVFTYFYKG--NKYWKFNNQKLK 177 (196)
T ss_dssp CCSSCSEEEECTTSSEEEEEET--TEEEEEETTTTE
T ss_pred cCCCcceeEEecCCCEEEEEEC--CEEEEEECCcce
Confidence 11122333333 44 8999976 789999998753
No 242
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=86.55 E-value=17 Score=32.37 Aligned_cols=148 Identities=9% Similarity=0.050 Sum_probs=71.9
Q ss_pred CEEEEEceecCCCeEEEEECCCC-------CEEeCCCCCCCCcccEEEEe--C--CEEEEEcCcCCCCCCccceEEEEeC
Q 013797 188 THLIVSGNEIEGGVIWRYELETN-------NWFKGPSMRRPRCLFASATC--G--TFAFVAGGHGMDGSGVLNSAERYNP 256 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~-------~W~~l~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~ 256 (436)
+.+++.|+. ...+.+||..+. .|+.+..+.........+.+ + +..++.|+.+ ..+.+||.
T Consensus 71 ~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~v~iwd~ 141 (351)
T 3f3f_A 71 GRIIASASY--DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-------GILRLYDA 141 (351)
T ss_dssp CSEEEEEET--TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------CEEEEEEC
T ss_pred CCEEEEEcC--CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-------CcEEEecC
Confidence 556666654 346778887664 23333332222222222222 2 5566666543 25888998
Q ss_pred CCCC----eEeC------CCCccCCc-ceeEEEE-----CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCC
Q 013797 257 ETKS----WDSL------PGMRQRRK-LCSGCYM-----DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFP 320 (436)
Q Consensus 257 ~t~~----W~~~------~~~p~~r~-~~~~~~~-----~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~ 320 (436)
.+.+ |... ...+.... ....... ++.++++++.+ ..+..++...+....+..+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 212 (351)
T 3f3f_A 142 LEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE------QAIIYQRGKDGKLHVAAKLPG--- 212 (351)
T ss_dssp SSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT------EEEEEEECTTSCEEEEEECCC---
T ss_pred CChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC------CcEEEEccCCCceeeeeecCC---
Confidence 7654 2210 00111111 1111111 36666776633 234556666666544443331
Q ss_pred CCCCCCCCEEEEE-CC----EEEEEecCCCeEEEEECCCC
Q 013797 321 AETGKSPPLIAVV-NN----ELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 321 ~~~~r~~~~~~~~-~g----~lyv~gg~~~~i~~yd~~~~ 355 (436)
.......++.. ++ .+++.|+..+.|.+||..+.
T Consensus 213 --h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 213 --HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp --CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred --CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 00011122222 33 67888887888999988653
No 243
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.55 E-value=7.6 Score=37.55 Aligned_cols=108 Identities=8% Similarity=-0.001 Sum_probs=57.4
Q ss_pred CeEEEeccCC----CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEcee-------cCCCeEEEEECCC
Q 013797 142 PSVFMLASGD----SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNE-------IEGGVIWRYELET 209 (436)
Q Consensus 142 ~~l~~~~~~~----~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~-------~~~~~v~~ydp~t 209 (436)
..+|+...+. ..+..+|+.+.+-... ++...... ..++ -+..+||.... ...+.+.++|+.|
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~--I~vG~~Pg----ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGM--TDGGFLPH----PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEE--EEECSSCE----EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEE--EECCCCCc----eEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 4466655533 6788999988765432 22111111 1222 35678876421 1235799999999
Q ss_pred CCEEeCCCCC-CCC-----cccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 210 NNWFKGPSMR-RPR-----CLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 210 ~~W~~l~~~p-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
++-..--+++ .+| .-+.+++ -+.++||..-. ..+.+.++|..+++=
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~------~~~~VsVID~~t~kv 212 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS------PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS------SSCEEEEEETTTTEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC------CCCeEEEEECCCCeE
Confidence 9743211111 111 1122222 25578887421 135688999988763
No 244
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=86.35 E-value=2.6 Score=37.01 Aligned_cols=144 Identities=10% Similarity=0.032 Sum_probs=74.7
Q ss_pred eCCEEEEEceecCCCeEEEEECCC---------------CCEEeCCCCCC-CCcccEEE-EeCCEEEEEcCcCCCCCCcc
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELET---------------NNWFKGPSMRR-PRCLFASA-TCGTFAFVAGGHGMDGSGVL 248 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t---------------~~W~~l~~~p~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~ 248 (436)
.+|.+|+|-| ..+|+++... ..|..||.... |...-++. ..++++|++-|.
T Consensus 14 ~~ge~yfFkg----~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg~-------- 81 (227)
T 3lp9_A 14 KNNEAYFFIN----DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYEN-------- 81 (227)
T ss_dssp STTEEEEEET----TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEETT--------
T ss_pred CCCeEEEEEC----CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeCC--------
Confidence 3789999854 3577777622 12444432211 11111222 368999999663
Q ss_pred ceEEEEe--CCC-------------CCeEeCCCCccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEE
Q 013797 249 NSAERYN--PET-------------KSWDSLPGMRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 249 ~~~~~yd--~~t-------------~~W~~~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~ 310 (436)
.+|+|+ +.+ ..|..++....+ ....|++. ++++|++-| +..++||..+++-
T Consensus 82 -~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~~~~k~yfFkG--------~~yw~~d~~~~~~- 150 (227)
T 3lp9_A 82 -FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRSTRGKEVYLFKG--------DQYARIDYGSNSM- 150 (227)
T ss_dssp -EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECSSTTEEEEEET--------TEEEEEETTTTEE-
T ss_pred -EEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEECCCCEEEEEEC--------CEEEEEeCCCccc-
Confidence 477887 321 112222211001 12334433 689999976 3579999876532
Q ss_pred EcCCCCCCC--CCCC------CCCCCEEEE--ECCEEEEEecCCCeEEEEECCCC
Q 013797 311 HIPDILKDF--PAET------GKSPPLIAV--VNNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 311 ~v~~~~~~~--~~~~------~r~~~~~~~--~~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+.-|... ..+. +..-.++.. .++++|.+-| +..|+||..++
T Consensus 151 -~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 151 -VNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp -SSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--TEEEEEECCSS
T ss_pred -cCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--CEEEEEECCcc
Confidence 11111100 0010 122233333 2589999976 78999998775
No 245
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=86.34 E-value=11 Score=32.08 Aligned_cols=136 Identities=8% Similarity=0.071 Sum_probs=70.5
Q ss_pred EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC--CeE--eC----CCCccCCcceeEEEE---CCEEEEEeccCCCCC
Q 013797 226 ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK--SWD--SL----PGMRQRRKLCSGCYM---DNKFYVIGGRNEKDK 294 (436)
Q Consensus 226 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W~--~~----~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~ 294 (436)
+++..++++|++=|. .+++++.... ... .+ +.+|. ...|++. ++++|++-|
T Consensus 11 Ai~~~~g~~yfFkg~---------~~Wr~~~~~~~~~~~p~~Is~~w~glP~---~IDAa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG---------KYWRFSEGRGSRPQGPFLIADKWPALPR---KLDSVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp EEEEETTEEEEEETT---------EEEEECCSSSCCCEEEEEHHHHCTTSCS---SCSEEEECTTTCCEEEEET------
T ss_pred EEEEeCCEEEEEECC---------EEEEEECCccccCCCcEEhhhccCCCCC---CccEEEEECCCCeEEEEeC------
Confidence 455679999999653 3677776542 221 11 23343 2334433 688999976
Q ss_pred cCCEEEEEECCCCcE-EEcCCCCCCCCCCC--CCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE-----Ecc-cCCC
Q 013797 295 PLTCGEAYDEYAGTW-YHIPDILKDFPAET--GKSPPLIAVVNNELYSLETSSNELRVYLKDSNSWK-----NLG-LVPV 365 (436)
Q Consensus 295 ~~~~v~~yD~~~~~W-~~v~~~~~~~~~~~--~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~W~-----~v~-~~p~ 365 (436)
+..++|+..+..- ..+..+ ..|. ..-.+++...++++|++-| +..|+||..+++=. .+. ..+.
T Consensus 73 --~~yw~~~~~~~~~Pk~i~~~----G~p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 73 --RQVWVYTGASVLGPRRLDKL----GLGADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp --TEEEEEETTEEEEEEEGGGG----TCCTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred --CEEEEEcCCccCCCEEeeec----ccCCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccChhhcCCC
Confidence 3467887542110 111111 1111 1122222222679999976 68999998765311 111 1111
Q ss_pred ccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 366 RADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
.+ ....+++ ..++.+|+|-|..
T Consensus 145 vp---~~idaa~-~~~g~~Yffkg~~ 166 (195)
T 1itv_A 145 VP---LDTHDVF-QFREKAYFCQDRF 166 (195)
T ss_dssp SC---SSCSEEE-EETTEEEEEETTE
T ss_pred CC---CCCCEEE-EeCCeEEEEeCCE
Confidence 11 1122343 4569999998774
No 246
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=86.25 E-value=21 Score=33.11 Aligned_cols=232 Identities=13% Similarity=0.090 Sum_probs=111.3
Q ss_pred eEEEeccCCCeEEEEecCCCCeEeCCCCCCCC---CccCCCeeeEE----eCCEEEEEcee-----------cCCCeEEE
Q 013797 143 SVFMLASGDSSWWAFDRHFQTRRKLPELPSDP---CFKLGDKESLC----AGTHLIVSGNE-----------IEGGVIWR 204 (436)
Q Consensus 143 ~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~---~~~~~~~~~~~----~~~~iyv~GG~-----------~~~~~v~~ 204 (436)
.+|+-..-...+..+||..+.-..+ .++... ........+.. -.+.|+++.-. .....+.+
T Consensus 26 ~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~ 104 (334)
T 2p9w_A 26 VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS 104 (334)
T ss_dssp EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence 3444333456788999986654444 232210 00000012444 35778875210 01367999
Q ss_pred EECC---CCC--EEe-CCCCCCC-------Ccc-cEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCC---eEeCC
Q 013797 205 YELE---TNN--WFK-GPSMRRP-------RCL-FASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKS---WDSLP 265 (436)
Q Consensus 205 ydp~---t~~--W~~-l~~~p~~-------r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~ 265 (436)
||+. |++ |.. ++..... +.. ..-..+ +|.+||.+.... ..|+++|+.... |-.-.
T Consensus 105 ~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 105 FNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------PAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp EESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------CEEEEECTTSCCEEEEEECC
T ss_pred EcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------CeEEEEeCCCCEEeeeeecC
Confidence 9988 554 542 2221111 211 111222 688999866431 458999987543 54333
Q ss_pred CCccCCccee-EEEE-CCE-EEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEE--EEECCEEEEE
Q 013797 266 GMRQRRKLCS-GCYM-DNK-FYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLI--AVVNNELYSL 340 (436)
Q Consensus 266 ~~p~~r~~~~-~~~~-~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~--~~~~g~lyv~ 340 (436)
+....+.+.. .++. +|+ |++..+ ...+.+||+.+-...+++....+.. ......-++ ...+|+++++
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~-------~g~L~~fD~~~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGG-------PRALTAFDVSKPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESS-------SSSEEEEECSSSSCCCEECEESSCC-CCCTTEEEEEEEEETTEEEEE
T ss_pred CCcccccCcceEEEeCCCCEEEEEcC-------CCeEEEEcCCCCcceeecccccCCc-ccccCcccccccccCCEEEEE
Confidence 3333444444 4444 354 555543 2357999988432201110000000 001111222 2368988666
Q ss_pred ecCCCeEEEEECCCCcEEEcccC---CCccCCCCCceEEEEE---eCCEEEEEcCCC
Q 013797 341 ETSSNELRVYLKDSNSWKNLGLV---PVRADFNRGWGIAFKS---LGNELLVIGASS 391 (436)
Q Consensus 341 gg~~~~i~~yd~~~~~W~~v~~~---p~~~~~~~~~~~~~~~---~~~~l~v~GG~~ 391 (436)
....+.++.+--..+ |+....+ |.... ..+..++.+. .+++||++.+.-
T Consensus 251 ~~~~~~~~~l~S~Dg-W~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 251 GARAPYAISFRSWDN-WKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEETTEEEEEECSST-TSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCG
T ss_pred EcCCCCEEEEECCCC-cceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeeec
Confidence 543445555544444 9876532 32211 2333333222 679999997654
No 247
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=85.79 E-value=19 Score=32.09 Aligned_cols=194 Identities=10% Similarity=0.114 Sum_probs=91.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCC--CEEeCCCCCCCCcccEEEEe----CCEEEEEcCcCCCCCCccceEEEEeCCCC-
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETN--NWFKGPSMRRPRCLFASATC----GTFAFVAGGHGMDGSGVLNSAERYNPETK- 259 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~--~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~- 259 (436)
++.+++.|+. ...+.+||..++ .++.+..+........++.+ ++.+++.|+.++ .+.+||..++
T Consensus 22 ~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-------~v~vwd~~~~~ 92 (351)
T 3f3f_A 22 YGRHVATCSS--DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-------TVKLWEEDPDQ 92 (351)
T ss_dssp SSSEEEEEET--TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-------CEEEEEECTTS
T ss_pred CCCEEEEeeC--CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-------eEEEEecCCCc
Confidence 4445555543 346777776643 34443332222222222222 266777776543 3777887664
Q ss_pred ------CeEeCCCCccCCcceeEEEE--C--CEEEEEeccCCCCCcCCEEEEEECCCCc----EEE---cCCCCCCCCCC
Q 013797 260 ------SWDSLPGMRQRRKLCSGCYM--D--NKFYVIGGRNEKDKPLTCGEAYDEYAGT----WYH---IPDILKDFPAE 322 (436)
Q Consensus 260 ------~W~~~~~~p~~r~~~~~~~~--~--g~iyv~gG~~~~~~~~~~v~~yD~~~~~----W~~---v~~~~~~~~~~ 322 (436)
.|+.+..+.........+.+ + +.+++.++. -..+..||+.+.+ |.. +..+... ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~- 164 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN------DGILRLYDALEPSDLRSWTLTSEMKVLSIP-PA- 164 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET------TCEEEEEECSSTTCTTCCEEEEEEESCSCC-CS-
T ss_pred ccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC------CCcEEEecCCChHHhccccccccccccccc-cC-
Confidence 23333222211112222222 2 566666663 3467899987653 221 0011000 00
Q ss_pred CCCCCCEEEEE-----CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCC----EEEEEcCCCCC
Q 013797 323 TGKSPPLIAVV-----NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGN----ELLVIGASSTS 393 (436)
Q Consensus 323 ~~r~~~~~~~~-----~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~----~l~v~GG~~~~ 393 (436)
........+.. ++.++++++..+.+..++........+..+..- ......+++ ..++ .+++.|+.+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~i~~~~~-~p~~~~~~~~l~s~~~d-- 239 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH--KSLIRSISW-APSIGRWYQLIATGCKD-- 239 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC--CSCEEEEEE-CCCSSCSSEEEEEEETT--
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC--CcceeEEEE-CCCCCCcceEEEEEcCC--
Confidence 01111111222 366777777677777777777776655444321 111122232 2233 788888776
Q ss_pred CCCcEEEEeec
Q 013797 394 SHESMAIYTCC 404 (436)
Q Consensus 394 ~~~~~~~y~~~ 404 (436)
..+.+|...
T Consensus 240 --g~i~iwd~~ 248 (351)
T 3f3f_A 240 --GRIRIFKIT 248 (351)
T ss_dssp --SCEEEEEEE
T ss_pred --CeEEEEeCC
Confidence 356677433
No 248
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=85.58 E-value=4.9 Score=38.46 Aligned_cols=63 Identities=2% Similarity=-0.112 Sum_probs=35.3
Q ss_pred CCEEEEEeccCCCCCcCCEEEEEECCCCc-EEEcCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCC
Q 013797 280 DNKFYVIGGRNEKDKPLTCGEAYDEYAGT-WYHIPDILKDFPAETGKSPPLIAVV--NN-ELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 280 ~g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W~~v~~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg~~~~i~~yd~~~ 354 (436)
++.+++.++. ...+.+||+.+.. ...+..+. ........+.. ++ .+++.|+..+.|.+||..+
T Consensus 243 ~~~~l~s~~~------dg~i~i~d~~~~~~~~~~~~~~------~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVAD------DQKLMIWDTRNNNTSKPSHTVD------AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEET------TSEEEEEETTCSCSSSCSEEEE------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEeC------CCeEEEEECCCCCCCcceeEee------cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 4566666663 3568999998652 11111110 00111122223 23 4788888889999999986
No 249
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.29 E-value=25 Score=33.05 Aligned_cols=190 Identities=12% Similarity=0.127 Sum_probs=100.0
Q ss_pred CeEEEEecCC--CCeEeCCCCCCCCCccCCCeeeEEe---CCEEEEEceec-CCCeEEEEECCCCCEEeCCCC---CCC-
Q 013797 152 SSWWAFDRHF--QTRRKLPELPSDPCFKLGDKESLCA---GTHLIVSGNEI-EGGVIWRYELETNNWFKGPSM---RRP- 221 (436)
Q Consensus 152 ~~~~~~dp~~--~~W~~l~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~-~~~~v~~ydp~t~~W~~l~~~---p~~- 221 (436)
..++.++... .+|..+.+....... .+++.. .+.||+.+... ....+++.+-.-.+|+++... +..
T Consensus 31 ~Gl~~~~~~~~g~~W~~~~~~~~~~~v----~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~ 106 (394)
T 3b7f_A 31 KGAWFLASDPARRTWELRGPVFLGHTI----HHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAP 106 (394)
T ss_dssp TEEEEEEECTTSCSEEEEEEESTTSEE----EEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC
T ss_pred CceEEEECCCCCCCceECCccCCCCce----EEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcc
Confidence 3467777655 689876321111110 122322 56788765321 122588887778899988632 211
Q ss_pred -C-------cccEEEEe----CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC---cc--------------CCc
Q 013797 222 -R-------CLFASATC----GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM---RQ--------------RRK 272 (436)
Q Consensus 222 -r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---p~--------------~r~ 272 (436)
+ ...+++.. .+.+|+.+.. .-+++.+-...+|+.+... |. ...
T Consensus 107 ~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~--------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 107 EGETGRVVDHVFWLTPGHASEPGTWYAGTSP--------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp ----CCCCCEEEEEEECCTTSTTCEEEEEET--------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccccccccceeEEEeCCCCCCCEEEEEecC--------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1 01122332 4667765421 2377777777889987432 21 011
Q ss_pred ceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCC-----CCCCCEEEEEC---CEEEEEe
Q 013797 273 LCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAET-----GKSPPLIAVVN---NELYSLE 341 (436)
Q Consensus 273 ~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~-----~r~~~~~~~~~---g~lyv~g 341 (436)
.++.++. .+.||+... ...++..+-...+|+.+.........+. ....+.+++.. +.||+..
T Consensus 179 i~~i~~d~~~~~~l~vg~~-------~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMS-------SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp EEEEEECTTCTTCEEEEEE-------TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred eeEEEECCCCCCEEEEEEC-------CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 1222222 256777642 1246777777789998864221100011 11123333331 6777753
Q ss_pred cCCCeEEEEECCCCcEEEccc
Q 013797 342 TSSNELRVYLKDSNSWKNLGL 362 (436)
Q Consensus 342 g~~~~i~~yd~~~~~W~~v~~ 362 (436)
...|++.+-...+|+.+..
T Consensus 252 --~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 252 --HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp --TTEEEEEETTTTEEECGGG
T ss_pred --CCeEEEeCCCCCcceECCC
Confidence 3679999988999999863
No 250
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.10 E-value=16 Score=37.64 Aligned_cols=145 Identities=12% Similarity=-0.003 Sum_probs=80.3
Q ss_pred CCeEEEEECCC------C--CEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC---CeEeCCCC
Q 013797 199 GGVIWRYELET------N--NWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK---SWDSLPGM 267 (436)
Q Consensus 199 ~~~v~~ydp~t------~--~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~~~~ 267 (436)
.+.++++|..+ . .++.+..-.... ......-++.+|+.+..+. ....+.++|..+. .|+.+-+-
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS----PNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCcccceeccCC
Confidence 56899999876 4 577665422211 1122234678888865432 2356889998876 48776332
Q ss_pred ccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCc-EEEcCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEec
Q 013797 268 RQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGT-WYHIPDILKDFPAETGKSPPLIAVV--NN-ELYSLET 342 (436)
Q Consensus 268 p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W~~v~~~~~~~~~~~~r~~~~~~~~--~g-~lyv~gg 342 (436)
............ ++.+++....++ ...++++|+.+++ ...+.... . . ...+.. ++ .+++...
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g----~~~l~~~~~~~g~~~~~l~~~~------~--~-v~~~~~s~d~~~l~~~~s 399 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDV----KNTLQLHDLATGALLKIFPLEV------G--S-VVGYSGQKKDTEIFYQFT 399 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETT----EEEEEEEETTTCCEEEEECCCS------S--E-EEEEECCTTCSEEEEEEE
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECC----EEEEEEEECCCCCEEEecCCCC------c--e-EEEEecCCCCCEEEEEEe
Confidence 111122234445 777877765432 3468899986654 44443211 0 0 011111 33 5554432
Q ss_pred ---CCCeEEEEECCCCc--EEEcc
Q 013797 343 ---SSNELRVYLKDSNS--WKNLG 361 (436)
Q Consensus 343 ---~~~~i~~yd~~~~~--W~~v~ 361 (436)
....++.||..+++ .+.+.
T Consensus 400 s~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 400 SFLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp CSSCCCEEEEEETTSSSCCCEEEE
T ss_pred CCCCCCEEEEEECCCCccceEEee
Confidence 24689999998877 66554
No 251
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=84.49 E-value=23 Score=31.98 Aligned_cols=215 Identities=9% Similarity=0.050 Sum_probs=94.8
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
....+..||..+++-... +..+.. ...++. ..++.+++.|+. ...+.+||.....-..+..... .-..+.
T Consensus 85 ~D~~v~~wd~~~~~~~~~--~~~h~~---~v~~~~~~~~~~~l~s~s~--D~~i~vwd~~~~~~~~~~~h~~--~v~~~~ 155 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQR--FVGHKS---DVMSVDIDKKASMIISGSR--DKTIKVWTIKGQCLATLLGHND--WVSQVR 155 (319)
T ss_dssp TTSEEEEEETTTTEEEEE--EECCSS---CEEEEEECTTSCEEEEEET--TSCEEEEETTSCEEEEECCCSS--CEEEEE
T ss_pred CCCEEEEEECCCCCeeEE--EccCCC---cEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeEEEEeccCC--cEEEEE
Confidence 456788889887653321 111100 000111 224556666653 3467888876554333322111 111111
Q ss_pred Ee-------CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEE
Q 013797 229 TC-------GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 229 ~~-------~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v 299 (436)
.. ++..++.|+.++ .+.++|..+.+-... +.........+.+ ++++.+.|+.+ ..+
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~-------~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~d------g~i 220 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDK-------MVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKD------GEI 220 (319)
T ss_dssp ECCC------CCEEEEEETTS-------CEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETT------CEE
T ss_pred EccCCCCCCCccEEEEEeCCC-------EEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCC------CeE
Confidence 11 223455555432 478888876543211 1111111112222 66777777643 467
Q ss_pred EEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCc-EEEccc-CCCccCCCCCceEE
Q 013797 300 EAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNS-WKNLGL-VPVRADFNRGWGIA 376 (436)
Q Consensus 300 ~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~-W~~v~~-~p~~~~~~~~~~~~ 376 (436)
..||+.+.+=...-... . ....++.. ++.+++.+ ....+.+|+..... ...+.. ..............
T Consensus 221 ~iwd~~~~~~~~~~~~~------~--~v~~~~~sp~~~~la~~-~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 291 (319)
T 3frx_A 221 MLWNLAAKKAMYTLSAQ------D--EVFSLAFSPNRYWLAAA-TATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVS 291 (319)
T ss_dssp EEEETTTTEEEEEEECC------S--CEEEEEECSSSSEEEEE-ETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEE
T ss_pred EEEECCCCcEEEEecCC------C--cEEEEEEcCCCCEEEEE-cCCCcEEEEeCcCeeeeccCccccccccCcCcceeE
Confidence 88998876422111111 0 11112222 44444443 35668888876543 222211 11000000111112
Q ss_pred EE-EeCCEEEEEcCCCCCCCCcEEEE
Q 013797 377 FK-SLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 377 ~~-~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
++ ..+++.++.|+.+ ..+.+|
T Consensus 292 ~~~spdg~~l~sg~~D----g~i~vW 313 (319)
T 3frx_A 292 LAWSADGQTLFAGYTD----NVIRVW 313 (319)
T ss_dssp EEECTTSSEEEEEETT----SCEEEE
T ss_pred EEECCCCCEEEEeecC----ceEEEE
Confidence 21 3467788888876 356677
No 252
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=84.26 E-value=26 Score=32.49 Aligned_cols=97 Identities=8% Similarity=-0.028 Sum_probs=50.4
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE-eCCEEEEEceec-------CCCeEEEEECCCCCE-EeCCCCCC--
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC-AGTHLIVSGNEI-------EGGVIWRYELETNNW-FKGPSMRR-- 220 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~-------~~~~v~~ydp~t~~W-~~l~~~p~-- 220 (436)
..++.||+.+.+-... ++..... . .+.. -+..+|+..... ..+.+.+||+.+.+- ..++-.+.
T Consensus 31 ~~v~v~D~~t~~~~~~--i~~g~~p-~---i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLGM--VPTAFNG-H---VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp CEEEEEETTTCCEEEE--EECCEEE-E---EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred CeEEEEECCCCeEEEE--ecCCCCC-c---eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 4788999888765422 2222111 1 1222 366888875211 124689999988763 23321110
Q ss_pred --CCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCC
Q 013797 221 --PRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKS 260 (436)
Q Consensus 221 --~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 260 (436)
...-+.++. -+..+|+.... ..+.+.+||..+++
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~------~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNAS------PATSIGIVDVAKGD 142 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEES------SSEEEEEEETTTTE
T ss_pred ccCCCcceEEECCCCCEEEEECCC------CCCeEEEEECCCCc
Confidence 111122333 24567777421 13468889998774
No 253
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.24 E-value=25 Score=32.20 Aligned_cols=169 Identities=12% Similarity=0.019 Sum_probs=94.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCCC---EEeCCCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNN---WFKGPSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~---W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
++.||+.. .....++++++.... +.....+..| ..+++ .++.||+.-.. ...++++++....=
T Consensus 46 ~~~lyw~D--~~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 46 HGLIYWSD--VSEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDSE-------TNRIEVSNLDGSLR 113 (318)
T ss_dssp GTEEEEEE--TTTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEETT-------TTEEEEEETTSCSC
T ss_pred CCEEEEEE--CCCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEECC-------CCEEEEEECCCCcE
Confidence 57888874 234678999987652 2221222222 22333 47899998532 24688999876443
Q ss_pred EeC--CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CC
Q 013797 262 DSL--PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NN 335 (436)
Q Consensus 262 ~~~--~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g 335 (436)
+.+ ..+..| .+.++. ++.||+..-. ....|+++++....=+.+.... .....++++. ++
T Consensus 114 ~~l~~~~~~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~dG~~~~~~~~~~-------l~~Pnglavd~~~~ 178 (318)
T 3sov_A 114 KVLFWQELDQP---RAIALDPSSGFMYWTDWG-----EVPKIERAGMDGSSRFIIINSE-------IYWPNGLTLDYEEQ 178 (318)
T ss_dssp EEEECSSCSSE---EEEEEEGGGTEEEEEECS-----SSCEEEEEETTSCSCEEEECSS-------CSCEEEEEEETTTT
T ss_pred EEEEeCCCCCc---cEEEEeCCCCEEEEEecC-----CCCEEEEEEcCCCCeEEEEECC-------CCCccEEEEeccCC
Confidence 333 222222 123333 6899998521 2357899998754322221110 1112245554 68
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEc
Q 013797 336 ELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIG 388 (436)
Q Consensus 336 ~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~G 388 (436)
+||+.....+.|+++|++...-+.+..- . ...-.+++ ..++.||+.-
T Consensus 179 ~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~---~~~P~gla--v~~~~lywtd 225 (318)
T 3sov_A 179 KLYWADAKLNFIHKSNLDGTNRQAVVKG-S---LPHPFALT--LFEDILYWTD 225 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECS-C---CSCEEEEE--EETTEEEEEE
T ss_pred EEEEEECCCCEEEEEcCCCCceEEEecC-C---CCCceEEE--EeCCEEEEEe
Confidence 9999998788999999976443433210 0 11123344 5678888873
No 254
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=83.79 E-value=41 Score=34.35 Aligned_cols=191 Identities=12% Similarity=-0.027 Sum_probs=94.9
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC-----------CCeEEEEECCCCCE--EeCCCC
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE-----------GGVIWRYELETNNW--FKGPSM 218 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-----------~~~v~~ydp~t~~W--~~l~~~ 218 (436)
..++.+|..+++......++.. .+.. .+-+-+|..++++.... ...+++++..+.+- +.+-..
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~-~~~~---~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGG-KYAT---PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCC-TTCC---CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCcCCcccCcc-cccc---eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec
Confidence 5788899988875411111111 0011 12233554444443211 24699999988752 222222
Q ss_pred CCC-CcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcC
Q 013797 219 RRP-RCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 219 p~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~ 296 (436)
+.. ........ -+++..++...... ....++++|..+..++.+...... ....+..+|.+|+....+. ..
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~---~~ 294 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGW---SENDVYWKRPGEKDFRLLVKGVGA--KYEVHAWKDRFYVLTDEGA---PR 294 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETT---TEEEEEEECTTCSSCEEEEECSSC--CEEEEEETTEEEEEECTTC---TT
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCC---CceEEEEEcCCCCceEEeecCCCc--eEEEEecCCcEEEEECCCC---CC
Confidence 211 12222222 24443333332221 234678888777778776432211 1222335777666543221 24
Q ss_pred CEEEEEECCCCc---EEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC--CCeEEEEECCCCcEEEc
Q 013797 297 TCGEAYDEYAGT---WYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS--SNELRVYLKDSNSWKNL 360 (436)
Q Consensus 297 ~~v~~yD~~~~~---W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~--~~~i~~yd~~~~~W~~v 360 (436)
..++.+|+.+.. |..+.+... ......+...++.|++.... ...++.+|+..+.-+.+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~------~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDS------SASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCS------SCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred CEEEEEeCCCCCccCCeEEecCCC------CCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 678999987764 877654321 11112234458888777543 34678888765544444
No 255
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.62 E-value=6.1 Score=39.50 Aligned_cols=188 Identities=12% Similarity=0.010 Sum_probs=94.1
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG 266 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~ 266 (436)
++.+++..+.. ....+||..+++-+.+...+. ......-+|+..++++.... ....++++|+.+++.+.+..
T Consensus 121 g~~~~~~s~~~--~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~---~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 121 GEAVVFTGATE--DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG---GRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp SSCEEEEEECS--SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET---TEEEEEEEETTTCCCEEECC
T ss_pred CCeEEEEecCC--CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC---CCeEEEEEcCCCCCceEeec
Confidence 44455444322 234488998888776654332 22222235555554443321 12459999999998887643
Q ss_pred CccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEE----EEECCEEEEEe
Q 013797 267 MRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLI----AVVNNELYSLE 341 (436)
Q Consensus 267 ~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~----~~~~g~lyv~g 341 (436)
-... ....+. -||+.++.+..++ ...++.+|+.+++...+........ .. ..... ..-+|++++.+
T Consensus 193 ~~~~--~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 193 GEGS--FSSASISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFS--SY-RPTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp SSCE--EEEEEECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHH--HH-CCSEEEEEEECTTSCEEEEE
T ss_pred CCCc--cccceECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChh--hh-hhccccceeEcCCCcEEEEE
Confidence 2211 111222 2666544433221 2478999999988773332211000 00 00000 22366777777
Q ss_pred cCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 342 TSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 342 g~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
...+.+.+|+. ++... .+. .....+++ . ++++++.++... ....+|.++.
T Consensus 264 ~~~g~~~l~~~--g~~~~---~~~----~~v~~~~~-s-dg~~l~~~s~~~---~p~~l~~~d~ 313 (582)
T 3o4h_A 264 RREGRSAVFID--GERVE---APQ----GNHGRVVL-W-RGKLVTSHTSLS---TPPRIVSLPS 313 (582)
T ss_dssp EETTEEEEEET--TEEEC---CCS----SEEEEEEE-E-TTEEEEEEEETT---EEEEEEEETT
T ss_pred EcCCcEEEEEE--CCeec---cCC----CceEEEEe-c-CCEEEEEEcCCC---CCCeEEEEcC
Confidence 66678888888 44332 111 11122333 3 778777665442 2234554453
No 256
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.56 E-value=27 Score=31.99 Aligned_cols=197 Identities=14% Similarity=0.104 Sum_probs=96.6
Q ss_pred CCCeEeCCCCCC-CCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEc
Q 013797 161 FQTRRKLPELPS-DPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAG 238 (436)
Q Consensus 161 ~~~W~~l~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~G 238 (436)
-.+|..+..... +..... ..+..++.+|+.+. ...+++-.=.-.+|+.+.... +...+.++.. ++.+|++|
T Consensus 108 G~tW~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~---~g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRL---IKALGNGSAEMITN---VGAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp TSSCEECCCCTTCSSCEEE---EEEEETTEEEEEET---TCCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEE
T ss_pred CCCceECccccCCCCCeEE---EEEECCCCEEEEeC---CccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEE
Confidence 467888764321 111111 12234678887763 224555443445799885422 2233444433 45666655
Q ss_pred CcCCCCCCccceEEEE-eCCCCCeEeCCCCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECC-CCcEEEcCCC
Q 013797 239 GHGMDGSGVLNSAERY-NPETKSWDSLPGMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEY-AGTWYHIPDI 315 (436)
Q Consensus 239 G~~~~~~~~~~~~~~y-d~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~-~~~W~~v~~~ 315 (436)
. .+ .+++- |..-.+|+.+.. +.....+.++. -++.+|+++.. ..++..+.. ..+|+.+...
T Consensus 181 ~-~G-------~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-------G~~~~s~~D~G~tW~~~~~~ 244 (327)
T 2xbg_A 181 S-RG-------SFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG-------GKIAFSDPDNSENWGELLSP 244 (327)
T ss_dssp T-TS-------SEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT-------TEEEEEETTEEEEECCCBCT
T ss_pred C-CC-------cEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC-------ceEEEecCCCCCeeEeccCC
Confidence 2 21 13332 333578998743 22333333333 36778877631 124444333 4589876532
Q ss_pred --CCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCC
Q 013797 316 --LKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGAS 390 (436)
Q Consensus 316 --~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~ 390 (436)
+ .......++.. ++.+|++|. .+.+++-.-...+|+.+...... ......+++ .-+++++++|..
T Consensus 245 ~~~------~~~~~~~v~~~~~~~~~~~g~-~g~i~~S~DgG~tW~~~~~~~~~--~~~~~~v~~-~~~~~~~~~G~~ 312 (327)
T 2xbg_A 245 LRR------NSVGFLDLAYRTPNEVWLAGG-AGALLCSQDGGQTWQQDVDVKKV--PSNFYKILF-FSPDQGFILGQK 312 (327)
T ss_dssp TSS------CCSCEEEEEESSSSCEEEEES-TTCEEEESSTTSSCEECGGGTTS--SSCCCEEEE-EETTEEEEECST
T ss_pred ccc------CCcceEEEEecCCCEEEEEeC-CCeEEEeCCCCcccEEcCccCCC--CCCeEEEEE-ECCCceEEEcCC
Confidence 2 11111222222 568888875 35565543445799998632111 111233443 346777776643
No 257
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=83.23 E-value=17 Score=37.33 Aligned_cols=143 Identities=10% Similarity=0.031 Sum_probs=80.6
Q ss_pred CeEEEEECCCC--CEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC---CeEeCCCCccCCcce
Q 013797 200 GVIWRYELETN--NWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK---SWDSLPGMRQRRKLC 274 (436)
Q Consensus 200 ~~v~~ydp~t~--~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~r~~~ 274 (436)
+.++++|..+. +|+.+..-.... .......++.+|+....+. ....+..+|..+. .|+.+-+-.... .
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~- 331 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRDA----PNRRLVTVDAANPGPAHWRDLIPERQQV-L- 331 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECCCSSC-E-
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCccccEEEecCCCCE-E-
Confidence 68999998776 677764322111 1123345788988876432 2356888998764 387652222211 1
Q ss_pred eEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE----C-CEEEEEec---CCCe
Q 013797 275 SGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV----N-NELYSLET---SSNE 346 (436)
Q Consensus 275 ~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~----~-g~lyv~gg---~~~~ 346 (436)
+....++.|++..-.+ ....++++|+..+....+. ++. .. .+..+ + +.|++... ....
T Consensus 332 ~~s~~g~~lv~~~~~~----g~~~l~~~d~~g~~~~~l~-~p~-----~~----~~~~~~~~~d~~~l~~~~ss~~tP~~ 397 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVD----ATARVEQFDYEGKRVREVA-LPG-----LG----SVSGFNGKHDDPALYFGFENYAQPPT 397 (693)
T ss_dssp EEEEETTEEEEEEEET----TEEEEEEECTTSCEEEEEC-CSS-----SS----EEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred EEEEECCEEEEEEEEC----CeeEEEEEECCCCeeEEee-cCC-----Cc----eEEeeecCCCCCEEEEEecCCCCCCE
Confidence 3344566665554322 2346889998866555554 221 00 11111 2 34544432 2468
Q ss_pred EEEEECCCCcEEEcccC
Q 013797 347 LRVYLKDSNSWKNLGLV 363 (436)
Q Consensus 347 i~~yd~~~~~W~~v~~~ 363 (436)
++.||.++++.+.+...
T Consensus 398 l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 398 LYRFEPKSGAISLYRAS 414 (693)
T ss_dssp EEEECTTTCCEEEEECC
T ss_pred EEEEECCCCeEEEEEeC
Confidence 99999999888877543
No 258
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=83.08 E-value=6 Score=38.25 Aligned_cols=145 Identities=9% Similarity=0.022 Sum_probs=79.8
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CC-EEEEEeccCCCCCcCCEEEEEECCCC
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DN-KFYVIGGRNEKDKPLTCGEAYDEYAG 307 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g-~iyv~gG~~~~~~~~~~v~~yD~~~~ 307 (436)
++.||+.--. ..+.++|+.+++.+.+.. .......+.+ ++ .||+.....+. ....+..++.. +
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~-g 214 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRE-S 214 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGG-G
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCC-C
Confidence 4789988431 468899999988776533 1112222222 34 48998643321 22345666654 3
Q ss_pred cEE---EcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCC
Q 013797 308 TWY---HIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGN 382 (436)
Q Consensus 308 ~W~---~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 382 (436)
.|. .++.+. ..+++++. +|.||+.....+.|++||+++..-..+..++.. ..-.++++...++
T Consensus 215 ~~~~~~~l~~~~---------~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~---~~P~gia~~pdG~ 282 (430)
T 3tc9_A 215 GFKVITELTKGQ---------NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS---GWEFHIQFHPSGN 282 (430)
T ss_dssp TSCSEEEEEECS---------SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS---SCCEEEEECTTSS
T ss_pred ceeeeeeeccCC---------CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC---CcceeEEEcCCCC
Confidence 332 222221 12334443 679999987678999999988765444333321 1122355433445
Q ss_pred EEEEEcCCCCCCCCcEEEEeecC
Q 013797 383 ELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 383 ~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
.||+.-... ..+..+.++.
T Consensus 283 ~lyv~d~~~----~~I~~~~~d~ 301 (430)
T 3tc9_A 283 YAYIVVVNQ----HYILRSDYDW 301 (430)
T ss_dssp EEEEEETTT----TEEEEEEEET
T ss_pred EEEEEECCC----CEEEEEeCCc
Confidence 599885443 3555665553
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=82.53 E-value=13 Score=35.83 Aligned_cols=143 Identities=12% Similarity=-0.006 Sum_probs=78.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeE---
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWD--- 262 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~--- 262 (436)
++.||+.-.. ..+.++|+.+++...+.. ...+ -..+++ -++.||+....... ....+..++... .+.
T Consensus 152 ~g~Lyv~D~~---~~I~~id~~~g~v~~~~~-~~~~-P~giavd~dG~lyVad~~~~~---~~~gv~~~~~~~-~~~~~~ 222 (433)
T 4hw6_A 152 YDDLYWVGQR---DAFRHVDFVNQYVDIKTT-NIGQ-CADVNFTLNGDMVVVDDQSSD---TNTGIYLFTRAS-GFTERL 222 (433)
T ss_dssp TCEEEEECBT---SCEEEEETTTTEEEEECC-CCSC-EEEEEECTTCCEEEEECCSCT---TSEEEEEECGGG-TTCCEE
T ss_pred CCEEEEEeCC---CCEEEEECCCCEEEEeec-CCCC-ccEEEECCCCCEEEEcCCCCc---ccceEEEEECCC-Ceeccc
Confidence 3899998532 689999999998877644 1111 122222 25569988643211 122355565532 222
Q ss_pred eCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcE-EEcCCCCCCCCCCCCCCCCEEEEE-CC-EE
Q 013797 263 SLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTW-YHIPDILKDFPAETGKSPPLIAVV-NN-EL 337 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W-~~v~~~~~~~~~~~~r~~~~~~~~-~g-~l 337 (436)
.++.+.. ....++. ++.||+... ....+++||+.+++- ..+..... .+ ....+++. +| .|
T Consensus 223 ~~~~~~~---P~giavd~~~G~lyv~d~------~~~~V~~~d~~~g~~~~~~~~~~~-----~~-~~~~ia~dpdG~~L 287 (433)
T 4hw6_A 223 SLCNARG---AKTCAVHPQNGKIYYTRY------HHAMISSYDPATGTLTEEEVMMDT-----KG-SNFHIVWHPTGDWA 287 (433)
T ss_dssp EEEECSS---BCCCEECTTTCCEEECBT------TCSEEEEECTTTCCEEEEEEECSC-----CS-SCEEEEECTTSSEE
T ss_pred cccccCC---CCEEEEeCCCCeEEEEEC------CCCEEEEEECCCCeEEEEEeccCC-----CC-CcccEEEeCCCCEE
Confidence 2221111 1223332 678998753 235789999987765 33322210 11 11234433 34 59
Q ss_pred EEEecCCCeEEEEECC
Q 013797 338 YSLETSSNELRVYLKD 353 (436)
Q Consensus 338 yv~gg~~~~i~~yd~~ 353 (436)
|+.....+.|+++|..
T Consensus 288 Yvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 288 YIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEETTTTEEEEEEBC
T ss_pred EEEeCCCCEEEEEeCC
Confidence 9998777899997765
No 260
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=82.40 E-value=9.1 Score=39.37 Aligned_cols=160 Identities=7% Similarity=-0.032 Sum_probs=83.1
Q ss_pred CCE-EEEEceec-CCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC---e
Q 013797 187 GTH-LIVSGNEI-EGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS---W 261 (436)
Q Consensus 187 ~~~-iyv~GG~~-~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---W 261 (436)
+|. |++..... ..+.++++|..+.+++.+..-... ....+..++.+|+....+. ....+.++|..+.. |
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~----~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA--KYEVHAWKDRFYVLTDEGA----PRQRVFEVDPAKPARASW 310 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC--CEEEEEETTEEEEEECTTC----TTCEEEEEBTTBCSGGGC
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc--eEEEEecCCcEEEEECCCC----CCCEEEEEeCCCCCccCC
Confidence 444 44433333 346888888777788777542221 1222224555666644321 23568899987765 8
Q ss_pred EeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECC-EEEEE
Q 013797 262 DSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNN-ELYSL 340 (436)
Q Consensus 262 ~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g-~lyv~ 340 (436)
+.+-+.............++.+++....++ ...++.+|+..+.-..+. .+.. ..-...+ ..-++ .+++.
T Consensus 311 ~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~----~~v~~~~-~s~d~~~l~~~ 380 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIVGGHLSLEYLKDA----TSEVRVATLKGKPVRTVQ-LPGV----GAASNLM-GLEDLDDAYYV 380 (695)
T ss_dssp EEEECCCSSCEEEEEEEETTEEEEEEEETT----EEEEEEEETTCCEEEECC-CSSS----SEECCCB-SCTTCSEEEEE
T ss_pred eEEecCCCCCeEEEEEEECCEEEEEEEECC----EEEEEEEeCCCCeeEEec-CCCC----eEEEEee-cCCCCCEEEEE
Confidence 766322111112233445888888765442 356788887655444443 1100 0000000 00133 44443
Q ss_pred ec---CCCeEEEEECCCCcEEEccc
Q 013797 341 ET---SSNELRVYLKDSNSWKNLGL 362 (436)
Q Consensus 341 gg---~~~~i~~yd~~~~~W~~v~~ 362 (436)
.. ....++.||..+++.+.+..
T Consensus 381 ~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 381 FTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp EEETTEEEEEEEEETTTCCEEEEEE
T ss_pred EcCCCCCCEEEEEECCCCcEEEEec
Confidence 32 13579999999888776643
No 261
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.26 E-value=42 Score=34.14 Aligned_cols=145 Identities=10% Similarity=0.067 Sum_probs=72.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.+++.|+. ...+.+||..+++-.. +.. +...-.+++.. ++..++.|+.++ .+.++|.....=..+
T Consensus 441 ~g~~l~sgs~--Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D~-------~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 441 DGQFALSGSW--DGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRDR-------TIKLWNTLGECKYTI 509 (694)
T ss_dssp TSSEEEEEET--TSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETTS-------CEEEECTTSCEEEEE
T ss_pred CCCEEEEEeC--CCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCCC-------EEEEEECCCCcceee
Confidence 5556666653 3578999998875322 111 11111122222 455556665432 477788754432222
Q ss_pred CCCccC-CcceeEEEE--CC--EEEEEeccCCCCCcCCEEEEEECCCCcEEEc-CCCCCCCCCCCCCCCCEEEEE-CCEE
Q 013797 265 PGMRQR-RKLCSGCYM--DN--KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHI-PDILKDFPAETGKSPPLIAVV-NNEL 337 (436)
Q Consensus 265 ~~~p~~-r~~~~~~~~--~g--~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v-~~~~~~~~~~~~r~~~~~~~~-~g~l 337 (436)
...... +.....+.+ ++ .+++.|+.+ ..+.+||+.+.+-... .... . ....++.. ++++
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~h~-------~-~v~~v~~spdg~~ 575 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAGHT-------G-YVSTVAVSPDGSL 575 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECCCS-------S-CEEEEEECTTSSE
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcCCC-------C-CEEEEEEeCCCCE
Confidence 111111 111222222 22 355556533 3578899887654321 1111 0 11112222 5778
Q ss_pred EEEecCCCeEEEEECCCCc
Q 013797 338 YSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 338 yv~gg~~~~i~~yd~~~~~ 356 (436)
++.|+..+.|.+||..+.+
T Consensus 576 l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEEETTSBCEEEETTTTE
T ss_pred EEEEeCCCeEEEEECCCCc
Confidence 8888888899999998764
No 262
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=81.73 E-value=39 Score=33.10 Aligned_cols=172 Identities=9% Similarity=0.145 Sum_probs=80.3
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
++..++.|+. ...+.+||.....-..+..... .-.+++.. +++.++.++.+ ..+.+||.....-..+.
T Consensus 396 dg~~l~~~~~--d~~v~~~~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~ 464 (577)
T 2ymu_A 396 DGQTIASASD--DKTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDDQTIASASDD-------KTVKLWNRNGQLLQTLT 464 (577)
T ss_dssp TSSCEEEEET--TSEEEEECTTCCEEEEEECCSS--CEEEEEECTTSSEEEEEETT-------SEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeC--CCEEEEEeCCCCEEEEecCCCC--CeEEEEECCCCCEEEEEcCC-------CEEEEEECCCCEEEEEc
Confidence 4555555543 3467888854333333222111 11122222 45565665533 24778886544333321
Q ss_pred CCccCCcceeEEE-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecC
Q 013797 266 GMRQRRKLCSGCY-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETS 343 (436)
Q Consensus 266 ~~p~~r~~~~~~~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~ 343 (436)
..... -.++++ -++++.+.++.+ ..+..||.....-..+.... . ....++. -++++++.++.
T Consensus 465 ~~~~~--v~~~~~spd~~~las~~~d------~~i~iw~~~~~~~~~~~~h~------~--~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 465 GHSSS--VRGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGHS------S--SVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp CCSSC--EEEEEECTTSCEEEEEETT------SEEEEEETTSCEEEEEECCS------S--CEEEEEECTTSSCEEEEET
T ss_pred CCCCC--EEEEEEcCCCCEEEEEeCC------CEEEEEcCCCCEEEEEeCCC------C--CEEEEEEcCCCCEEEEEEC
Confidence 11111 111222 267777777633 35778886544322222111 0 0111222 25777777777
Q ss_pred CCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 344 SNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 344 ~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
.+.|.+||.....-..+.. ....-.++++ ..+++.++.||.+
T Consensus 529 dg~v~lwd~~~~~~~~~~~-----h~~~v~~~~f-s~dg~~l~s~~~D 570 (577)
T 2ymu_A 529 DKTVKLWNRNGQLLQTLTG-----HSSSVWGVAF-SPDGQTIASASSD 570 (577)
T ss_dssp TSEEEEECTTSCEEEEEEC-----CSSCEEEEEE-CTTSSCEEEEETT
T ss_pred cCEEEEEeCCCCEEEEEcC-----CCCCEEEEEE-cCCCCEEEEEeCC
Confidence 7889999975543333221 1111122332 3466767777766
No 263
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=81.58 E-value=25 Score=30.38 Aligned_cols=135 Identities=13% Similarity=0.184 Sum_probs=73.2
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCE--EeC----CCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNW--FKG----PSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W--~~l----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
.+|.+|+|-| ..+|+++...... ..+ +.+|. .--|+...++++|++-|. .+++|+..++
T Consensus 27 ~~g~~yfFkg----~~~Wr~~~~~~~~~p~~Is~~wpgLP~--~IDAA~~~~~~~yfFkG~---------~yw~~~~~~~ 91 (219)
T 1hxn_A 27 NHGATYVFSG----SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQDT---------KVYVFLTKGG 91 (219)
T ss_dssp TTSCEEEEET----TEEEESSSSSCTTCCEEGGGTCTTSCS--SCSEEEEETTEEEEEETT---------EEEEEECSSS
T ss_pred CCCcEEEEeC----CEEEEEcCCCCCCCceEhhhhccCCCC--CccEEEEECCcEEEecCC---------EEEEEeCCCC
Confidence 4788999855 3678877543221 111 12232 222444458999999652 4788886532
Q ss_pred CeEeCCC----------CccC--CcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCC---cEEEcCCCCCCCCC
Q 013797 260 SWDSLPG----------MRQR--RKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAG---TWYHIPDILKDFPA 321 (436)
Q Consensus 260 ~W~~~~~----------~p~~--r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~---~W~~v~~~~~~~~~ 321 (436)
.+..+. +|.. .....+|+. ++++|++-| +..+.||..+. .|...+-++
T Consensus 92 -~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~P~~i~~~~~g~p----- 157 (219)
T 1hxn_A 92 -YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------RRLWWLDLKSGAQATWTELPWPH----- 157 (219)
T ss_dssp -CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--------TEEEEEEGGGGGGCCCEEECCSC-----
T ss_pred -ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--------CEEEEEeCCCCceEhhhcCCCCC-----
Confidence 122211 2222 112344442 689999976 35689997543 333222222
Q ss_pred CCCCCCCEEEE------------ECCEEEEEecCCCeEEEEECCC
Q 013797 322 ETGKSPPLIAV------------VNNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 322 ~~~r~~~~~~~------------~~g~lyv~gg~~~~i~~yd~~~ 354 (436)
....++.. .++.+|.+-| +..++||..+
T Consensus 158 ---~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg--~~y~r~~~~~ 197 (219)
T 1hxn_A 158 ---EKVDGALCMEKPLGPNSCSTSGPNLYLIHG--PNLYCYRHVD 197 (219)
T ss_dssp ---SCCSEEEEESSCSSSCCSCSSSCEEEEEET--TEEEEESSHH
T ss_pred ---CCcCEEEEccccccccceeccCCeEEEEEC--CEEEEEeCCc
Confidence 11222333 2467999876 6788888754
No 264
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=81.46 E-value=30 Score=31.15 Aligned_cols=214 Identities=9% Similarity=0.018 Sum_probs=97.8
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE---EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccE
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL---CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFA 226 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~---~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~ 226 (436)
....+..||..+.....+.....+ ..++. ..++.+++.|+. ...+.+||..+++-.. .+..+....+
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~------v~~~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~--~~~~~~~~~~ 175 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAP------VKTIHWIKAPNYSCVMTGSW--DKTLKFWDTRSSNPMM--VLQLPERCYC 175 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSC------EEEEEEEECSSCEEEEEEET--TSEEEEECSSCSSCSE--EEECSSCEEE
T ss_pred CCCcEEEEEcCCCCceeeccccCc------eEEEEEEeCCCCCEEEEccC--CCcEEEEECCCCcEEE--EEecCCCceE
Confidence 356788889888765543221111 01122 235666666653 3578999988765211 1111222233
Q ss_pred EEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCC--eEeCCCCccCCcceeEEEECC----EEEEEeccCCCCCcCCEEE
Q 013797 227 SATCGTFAFVAGGHGMDGSGVLNSAERYNPETKS--WDSLPGMRQRRKLCSGCYMDN----KFYVIGGRNEKDKPLTCGE 300 (436)
Q Consensus 227 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g----~iyv~gG~~~~~~~~~~v~ 300 (436)
.......+++.++ + ..+.+||..... +..+...............+. ..++.|+. ...+.
T Consensus 176 ~~~~~~~~~~~~~-~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------dg~i~ 241 (368)
T 3mmy_A 176 ADVIYPMAVVATA-E-------RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI------EGRVA 241 (368)
T ss_dssp EEEETTEEEEEEG-G-------GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET------TSEEE
T ss_pred EEecCCeeEEEeC-C-------CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC------CCcEE
Confidence 3334555544433 2 247778876653 333332211111122222222 23555553 34578
Q ss_pred EEECCCCcE-------EEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCC
Q 013797 301 AYDEYAGTW-------YHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNR 371 (436)
Q Consensus 301 ~yD~~~~~W-------~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~ 371 (436)
.||.....- .....................+.. ++++++.|+..+.|.+||..+.+-.. .+... ...
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~--~~~ 317 (368)
T 3mmy_A 242 IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK--TSEQL--DQP 317 (368)
T ss_dssp EEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE--ECCCC--SSC
T ss_pred EEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE--EecCC--CCC
Confidence 888876521 110000000000000001111222 56777777778899999998764332 22211 111
Q ss_pred CceEEEEEeCCEEEEEcCCCC
Q 013797 372 GWGIAFKSLGNELLVIGASST 392 (436)
Q Consensus 372 ~~~~~~~~~~~~l~v~GG~~~ 392 (436)
...+++ ..+++.++.|+.++
T Consensus 318 v~~~~~-s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 318 ISACCF-NHNGNIFAYASSYD 337 (368)
T ss_dssp EEEEEE-CTTSSCEEEEECCC
T ss_pred ceEEEE-CCCCCeEEEEeccc
Confidence 122222 34566667666554
No 265
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=80.89 E-value=37 Score=31.86 Aligned_cols=154 Identities=9% Similarity=0.014 Sum_probs=77.6
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-CCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-GPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++.+++.|+. ...+.+||..+.+-.. +...+.. ....++.+ ++..++.|+.++ .+.+||..+++...
T Consensus 181 ~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~dg-------~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTN--LSRVIIFDIRTLERLQIIENSPRH-GAVSSICIDEECCVLILGTTRG-------IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEET--TSEEEEEETTTCCEEEEEECCGGG-CCEEEEEECTTSCEEEEEETTS-------CEEEEETTTTEEEE
T ss_pred CCCEEEEEeC--CCeEEEEeCCCCeeeEEEccCCCC-CceEEEEECCCCCEEEEEcCCC-------eEEEEEcCCccEEE
Confidence 4666666653 4579999998876432 2111111 12222223 566666666542 48889998765432
Q ss_pred CCCCccCCcceeEEEE-----CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEc-CCC---CCCCCC-C-----------
Q 013797 264 LPGMRQRRKLCSGCYM-----DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHI-PDI---LKDFPA-E----------- 322 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~-----~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v-~~~---~~~~~~-~----------- 322 (436)
.-..+....-.+.+.. ++++.+.|+.+ ..+.+||..+++-... ... +..... +
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 1011111000111111 34556666532 3578889877652211 100 000000 0
Q ss_pred ---CCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 013797 323 ---TGKSPPLIAVVNNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 323 ---~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.......++..++.+++.|+..+.|.+||..+.+
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred ccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc
Confidence 0011223445588888888888999999998754
No 266
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=80.65 E-value=18 Score=37.42 Aligned_cols=160 Identities=9% Similarity=-0.028 Sum_probs=87.2
Q ss_pred EeCC-EEEEEceec--CCCeEEEEECCCC--C-EEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCC
Q 013797 185 CAGT-HLIVSGNEI--EGGVIWRYELETN--N-WFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPET 258 (436)
Q Consensus 185 ~~~~-~iyv~GG~~--~~~~v~~ydp~t~--~-W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t 258 (436)
+-+| .|++..... ..+.++++|..+. + |+.+........ ......++.||+....+. ....++++|..+
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~----~~~~l~~~d~~~ 350 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGA----PLKKIVRVDLSG 350 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTC----TTCEEEEEECSS
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCC----CCCEEEEEeCCC
Confidence 3345 455444332 3468999999887 6 777754322221 122235677887754322 235689999887
Q ss_pred --CCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C
Q 013797 259 --KSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N 334 (436)
Q Consensus 259 --~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~ 334 (436)
..|+.+-+-... ........++.+++....++ ...++.+|+..+.-..+. .+. ... ...+.. +
T Consensus 351 ~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~------~~~-v~~~~~s~d 417 (741)
T 1yr2_A 351 STPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGAVS-LPG------IGS-ASGLSGRPG 417 (741)
T ss_dssp SSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEECB-CSS------SCE-EEEEECCBT
T ss_pred CccccEEEecCCCC-eEEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceeecc-CCC------CeE-EEEeecCCC
Confidence 468876322111 11223445888887765442 346788887655444443 210 000 011111 3
Q ss_pred C-EEEEEec---CCCeEEEEECCCCcEEEccc
Q 013797 335 N-ELYSLET---SSNELRVYLKDSNSWKNLGL 362 (436)
Q Consensus 335 g-~lyv~gg---~~~~i~~yd~~~~~W~~v~~ 362 (436)
+ .|++... ....++.||..+++.+.+..
T Consensus 418 ~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 418 DRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp CSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 3 4544422 23579999999988777654
No 267
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=80.19 E-value=39 Score=31.69 Aligned_cols=103 Identities=11% Similarity=-0.010 Sum_probs=57.3
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC-CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCC
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL-PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAG 307 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~ 307 (436)
++.+++.|+.+ ..+.+||..+.+-... ...+. .....++.+ ++++.+.|+.+ ..+.+||+.++
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIENSPR-HGAVSSICIDEECCVLILGTTR------GIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEECCGG-GCCEEEEEECTTSCEEEEEETT------SCEEEEETTTT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCC-CCceEEEEECCCCCEEEEEcCC------CeEEEEEcCCc
Confidence 46666666643 3588999988764321 11111 112222223 67777777744 35789999876
Q ss_pred cEEEcCCCCCCCCCCCCCCCCEEEEE--------CCEEEEEecCCCeEEEEECCCCc
Q 013797 308 TWYHIPDILKDFPAETGKSPPLIAVV--------NNELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 308 ~W~~v~~~~~~~~~~~~r~~~~~~~~--------~g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
+-...-.... . ..+..+ ++.+++.|+..+.|.+||..+.+
T Consensus 247 ~~~~~~~~~~--------~-~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 247 VLIRSWSFGD--------H-APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEEEEEBCTT--------C-EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred cEEEEEecCC--------C-CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 5433211110 0 011111 35567777777789999998765
No 268
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=79.97 E-value=55 Score=33.23 Aligned_cols=200 Identities=7% Similarity=-0.085 Sum_probs=112.3
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE--eCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC--AGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
...+...|.....-..+.+++..... . ++.. .++.||+... ....++++++.....+.+...... .-..++
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~-~---~l~~d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g~~-~P~GlA 86 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEA-S---ALDFDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGLD-YPEGMA 86 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCE-E---EEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCS-CCCEEE
T ss_pred CCcEEEEECCCCCcceEEEcCCCCce-E---EEEEECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCCCC-CcceEE
Confidence 56777888876543333333221111 1 1222 3689998743 346889999877655544322111 112344
Q ss_pred E--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC--CCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEE
Q 013797 229 T--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL--PGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAY 302 (436)
Q Consensus 229 ~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~y 302 (436)
+ .+++||+.-.. ...++++++....=+.+ ..+..| .+.++. +|.||+..-. ....|++.
T Consensus 87 vD~~~~~LY~tD~~-------~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g-----~~~~I~r~ 151 (628)
T 4a0p_A 87 VDWLGKNLYWADTG-------TNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWG-----GKPKIDRA 151 (628)
T ss_dssp EETTTTEEEEEETT-------TTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECS-----SSCEEEEE
T ss_pred EEeCCCEEEEEECC-------CCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCC-----CCCEEEEE
Confidence 4 57899998432 34689999865432222 222222 234443 6899998521 24578999
Q ss_pred ECCCCcEEEcCC-CCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEE
Q 013797 303 DEYAGTWYHIPD-ILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKS 379 (436)
Q Consensus 303 D~~~~~W~~v~~-~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~ 379 (436)
++....-..+.. +. ...++++. +++||+.....+.|+++|++...=+.+... ...-.+++ .
T Consensus 152 ~~dG~~~~~l~~~~~---------~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~-----l~~P~gla--v 215 (628)
T 4a0p_A 152 AMDGSERTTLVPNVG---------RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADD-----LPHPFGLT--Q 215 (628)
T ss_dssp ETTSCSCEEEECSCS---------SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-----CSCEEEEE--E
T ss_pred eCCCCceEEEECCCC---------CcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeecc-----CCCceEEE--E
Confidence 887665444332 11 12234444 589999998888999999976432333211 11123344 5
Q ss_pred eCCEEEEEc
Q 013797 380 LGNELLVIG 388 (436)
Q Consensus 380 ~~~~l~v~G 388 (436)
.+++||+.-
T Consensus 216 ~~~~ly~tD 224 (628)
T 4a0p_A 216 YQDYIYWTD 224 (628)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEec
Confidence 678888875
No 269
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=79.11 E-value=46 Score=32.87 Aligned_cols=155 Identities=8% Similarity=-0.024 Sum_probs=72.5
Q ss_pred EeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeC--CCCCeE
Q 013797 185 CAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNP--ETKSWD 262 (436)
Q Consensus 185 ~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~--~t~~W~ 262 (436)
+.+|..+++++.. ...+.+|+..+++-+++...+.. .....+...+++.+.+...+.. ....++..+. .... .
T Consensus 30 ~~DG~~la~~s~~-~g~~~lw~~~~g~~~~lt~~~~~-~~~~~~~spd~~l~~~~~~~g~--~~~~l~~~~~~~~g~~-~ 104 (582)
T 3o4h_A 30 VVDGDKLLVVGFS-EGSVNAYLYDGGETVKLNREPIN-SVLDPHYGVGRVILVRDVSKGA--EQHALFKVNTSRPGEE-Q 104 (582)
T ss_dssp EETTTEEEEEEEE-TTEEEEEEEETTEEEECCSSCCS-EECEECTTCSEEEEEEECSTTS--CCEEEEEEETTSTTCC-E
T ss_pred CCCCCeEEEEEcc-CCceeEEEEcCCCcEeeeccccc-ccccccCCCCeEEEEeccCCCC--cceEEEEEeccCCCcc-c
Confidence 4455444444432 22445555555655555432211 1111111233554443321111 2335777777 3332 2
Q ss_pred eCCCCccCCcceeEEEECC-EEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEe
Q 013797 263 SLPGMRQRRKLCSGCYMDN-KFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLE 341 (436)
Q Consensus 263 ~~~~~p~~r~~~~~~~~~g-~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~g 341 (436)
.+...+..+ ..+...++ .++++.+.. ..+..||+.+++-..+...+ . ......-+|+..+++
T Consensus 105 ~l~~~~~~~--~~~~s~dg~~~~~~s~~~------~~~~l~d~~~g~~~~l~~~~------~---~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 105 RLEAVKPMR--ILSGVDTGEAVVFTGATE------DRVALYALDGGGLRELARLP------G---FGFVSDIRGDLIAGL 167 (582)
T ss_dssp ECTTSCSBE--EEEEEECSSCEEEEEECS------SCEEEEEEETTEEEEEEEES------S---CEEEEEEETTEEEEE
T ss_pred cccCCCCce--eeeeCCCCCeEEEEecCC------CCceEEEccCCcEEEeecCC------C---ceEEECCCCCEEEEE
Confidence 332222221 22334454 455544422 22347898888776665432 1 111233466554443
Q ss_pred cC----CCeEEEEECCCCcEEEcc
Q 013797 342 TS----SNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 342 g~----~~~i~~yd~~~~~W~~v~ 361 (436)
.. ...|+++|.++++++.+.
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEEC
T ss_pred EEcCCCCeEEEEEcCCCCCceEee
Confidence 22 257999999999888774
No 270
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=78.04 E-value=43 Score=32.52 Aligned_cols=164 Identities=10% Similarity=-0.005 Sum_probs=78.2
Q ss_pred CCEEEEEceecCCCeEEEEECCCC----CEEeCCC---C--CCCC-cccEEEEe-CCEEEEEcCcCCCCCCccceEEEEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETN----NWFKGPS---M--RRPR-CLFASATC-GTFAFVAGGHGMDGSGVLNSAERYN 255 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~----~W~~l~~---~--p~~r-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd 255 (436)
..++|+-|.. .+.++++|..++ +-.+.-. + +... .-|.+... ++ |||..--+..+ .....+.++|
T Consensus 95 r~~l~v~~l~--s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v~vlD 170 (462)
T 2ece_A 95 RRFLIVPGLR--SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGILMLD 170 (462)
T ss_dssp SCEEEEEBTT--TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEEEEEC
T ss_pred CCEEEEccCC--CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeEEEEE
Confidence 5677776643 468999998877 3322211 1 0111 12333333 45 77643222111 1346799999
Q ss_pred CCCCCeEe-CC--CCccCCcceeEEE-ECCEEEEEec----------cCCCC---CcCCEEEEEECCCCcEEEcCCCCCC
Q 013797 256 PETKSWDS-LP--GMRQRRKLCSGCY-MDNKFYVIGG----------RNEKD---KPLTCGEAYDEYAGTWYHIPDILKD 318 (436)
Q Consensus 256 ~~t~~W~~-~~--~~p~~r~~~~~~~-~~g~iyv~gG----------~~~~~---~~~~~v~~yD~~~~~W~~v~~~~~~ 318 (436)
.+|.+=.. .+ ..+... ....-+ -++++++..- ..... ...+.+.+||..+.+ .+..+...
T Consensus 171 ~~T~~v~~~~~~~~~~~~~-~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg 247 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYL-AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLG 247 (462)
T ss_dssp TTTCCEEEECCSBCTTCCC-CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESC
T ss_pred CCCCeEEEEEccCCCCccc-cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecC
Confidence 99876321 11 111111 111211 2344444431 11110 246889999998763 33333210
Q ss_pred CCCCCCCCCCEEEEE-----CCEEEEEec-----CCCeEEEEECCCCcEEEcc
Q 013797 319 FPAETGKSPPLIAVV-----NNELYSLET-----SSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 319 ~~~~~~r~~~~~~~~-----~g~lyv~gg-----~~~~i~~yd~~~~~W~~v~ 361 (436)
. .-..+.-+.+ +..+|+... -.++|++|..+.++|+.+.
T Consensus 248 ~----~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~ 296 (462)
T 2ece_A 248 E----ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK 296 (462)
T ss_dssp T----TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE
T ss_pred C----CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE
Confidence 0 0001111112 335677765 5567777666567887765
No 271
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=77.72 E-value=24 Score=31.85 Aligned_cols=142 Identities=8% Similarity=0.066 Sum_probs=71.0
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEE-eCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWF-KGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS 263 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~-~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~ 263 (436)
++..++.|+. ...+.+||..+++-. .+... .....++.+ ++.+++.|+.++ .+.++|.....-..
T Consensus 76 dg~~l~s~s~--D~~v~~wd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~D~-------~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASW--DKTLRLWDVATGETYQRFVGH---KSDVMSVDIDKKASMIISGSRDK-------TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEET--TSEEEEEETTTTEEEEEEECC---SSCEEEEEECTTSCEEEEEETTS-------CEEEEETTSCEEEE
T ss_pred CCCEEEEEeC--CCEEEEEECCCCCeeEEEccC---CCcEEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCeEEE
Confidence 5555555543 357899999887632 22211 111122222 455666666543 47778876543322
Q ss_pred CCCCccCCcceeEEEE-------CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--C
Q 013797 264 LPGMRQRRKLCSGCYM-------DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--N 334 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~-------~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~ 334 (436)
+..-... -...... ++.+++.|+.+ ..+..||+.+.+-... +. ........+.. +
T Consensus 144 ~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~--~~------~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 144 LLGHNDW--VSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEAD--FI------GHNSNINTLTASPD 207 (319)
T ss_dssp ECCCSSC--EEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEE--EC------CCCSCEEEEEECTT
T ss_pred EeccCCc--EEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhhee--ec------CCCCcEEEEEEcCC
Confidence 2111000 0111111 23355556533 3578899876543221 11 00011111222 6
Q ss_pred CEEEEEecCCCeEEEEECCCCc
Q 013797 335 NELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 335 g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
+++++.|+..+.|.+||..+.+
T Consensus 208 g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 208 GTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp SSEEEEEETTCEEEEEETTTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCc
Confidence 7778888888899999998764
No 272
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.41 E-value=29 Score=33.44 Aligned_cols=69 Identities=16% Similarity=0.253 Sum_probs=40.3
Q ss_pred CCEEEEEeccCCCC---CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC--EEEEEecCCCeEEEEECC
Q 013797 280 DNKFYVIGGRNEKD---KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN--ELYSLETSSNELRVYLKD 353 (436)
Q Consensus 280 ~g~iyv~gG~~~~~---~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g--~lyv~gg~~~~i~~yd~~ 353 (436)
++++|+.-.....+ ...+.+.++|..+.+=. ..++ .+....++++. +| .+|+.....+.|.++|..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv--~~I~------vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI--NKIE------LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEE------EEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEE--EEEE------CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 47899985421111 12468999998877532 2222 11112233333 44 577776668999999998
Q ss_pred CCc
Q 013797 354 SNS 356 (436)
Q Consensus 354 ~~~ 356 (436)
+.+
T Consensus 402 t~k 404 (426)
T 3c75_H 402 TGE 404 (426)
T ss_dssp TCC
T ss_pred CCC
Confidence 754
No 273
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=77.10 E-value=33 Score=29.73 Aligned_cols=63 Identities=21% Similarity=0.256 Sum_probs=36.8
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEE----cc-cCCCcc--CCCCCceEEEEE-eCCEEEEEcCCCCCCCCcEEEEeecC
Q 013797 334 NNELYSLETSSNELRVYLKDSNSWKN----LG-LVPVRA--DFNRGWGIAFKS-LGNELLVIGASSTSSHESMAIYTCCP 405 (436)
Q Consensus 334 ~g~lyv~gg~~~~i~~yd~~~~~W~~----v~-~~p~~~--~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~y~~~p 405 (436)
++++|++-| +..|+||..+++-.. +. ..|... .......+|+.- .++++|+|-|.. .|+|++
T Consensus 127 ~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~~--------ywr~d~ 196 (225)
T 3oyo_A 127 GKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQN--------YVRIDF 196 (225)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETTE--------EEEEEC
T ss_pred CCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECCE--------EEEEeC
Confidence 689999976 689999987765443 11 122110 001122244322 478999998764 566665
Q ss_pred C
Q 013797 406 S 406 (436)
Q Consensus 406 ~ 406 (436)
.
T Consensus 197 ~ 197 (225)
T 3oyo_A 197 T 197 (225)
T ss_dssp C
T ss_pred C
Confidence 4
No 274
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.91 E-value=30 Score=37.46 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=74.6
Q ss_pred CCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEE-EEeCCCCCeEeCCCCccCCcceeEE
Q 013797 199 GGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAE-RYNPETKSWDSLPGMRQRRKLCSGC 277 (436)
Q Consensus 199 ~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~-~yd~~t~~W~~~~~~p~~r~~~~~~ 277 (436)
...+++++..+.+...+...+..+....... +++.+++++. ...++ ++|..++.-+.+. .........+
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-------~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~ 385 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-------EGDFLGIYDYRTGKAEKFE--ENLGNVFAMG 385 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-------TEEEEEEEETTTCCEEECC--CCCCSEEEEE
T ss_pred cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-------CCceEEEEECCCCCceEec--CCccceeeeE
Confidence 3478899988887666543322111112222 5544333332 13578 8999888766664 1111111222
Q ss_pred E-ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC----------CCe
Q 013797 278 Y-MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS----------SNE 346 (436)
Q Consensus 278 ~-~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~----------~~~ 346 (436)
. -+|+..+++.. ...+..+|+.+++-..+.... ..........-+|+.+++++. ...
T Consensus 386 ~SpDG~~la~~~~------~~~v~~~d~~tg~~~~~~~~~------~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 386 VDRNGKFAVVAND------RFEIMTVDLETGKPTVIERSR------EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp ECTTSSEEEEEET------TSEEEEEETTTCCEEEEEECS------SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred ECCCCCEEEEECC------CCeEEEEECCCCceEEeccCC------CCCccceEECCCCCeEEEEecCccccccCCCCCe
Confidence 2 26666666542 347899999988766654211 011111112225654444332 147
Q ss_pred EEEEECCCCcEEEcc
Q 013797 347 LRVYLKDSNSWKNLG 361 (436)
Q Consensus 347 i~~yd~~~~~W~~v~ 361 (436)
|++||..+.+...+.
T Consensus 454 i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 454 IHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEETTTTEEEECS
T ss_pred EEEEECCCCcEEEee
Confidence 999999988755543
No 275
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=75.22 E-value=40 Score=29.07 Aligned_cols=144 Identities=12% Similarity=0.078 Sum_probs=77.4
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCCC-E--EeC----CCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETNN-W--FKG----PSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~-W--~~l----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
++....+.+|+|-| ..+|+++..... . ..+ +.+|. ..-|+... ++++|++-|. ..+
T Consensus 35 Ai~~~~g~~~fFkg----~~~Wr~~~~~~~~~~P~~I~~~wp~lp~--~IDAA~~~~~~~k~yfFkG~---------~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD----RFIWRTVTPRDKPMGPLLVATFWPELPE--KIDAVYEAPQEEKAVFFAGN---------EYW 99 (218)
T ss_dssp EEEEETTEEEEEET----TEEEEESSTTSCCEEEEEGGGTCTTSCS--CCSEEEEETTTTEEEEEETT---------EEE
T ss_pred EEEeCCCcEEEEEC----CEEEEEeCCCCccCCCEEHHHhcCCCCC--CccEEEEECCCCEEEEEeCC---------EEE
Confidence 45667999999855 367777665422 1 112 22332 12233332 6899999652 478
Q ss_pred EEeCCCCCeEeCCC---------CccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCC
Q 013797 253 RYNPETKSWDSLPG---------MRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFP 320 (436)
Q Consensus 253 ~yd~~t~~W~~~~~---------~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~ 320 (436)
+||.. +..+. +|.......+++. ++++|++-| +..+.||..+++-.. .-|....
T Consensus 100 ~y~~~----~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~v~~--gyPr~i~ 165 (218)
T 1gen_A 100 IYSAS----TLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDP--GFPKLIA 165 (218)
T ss_dssp EEETT----EECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECS--SCCEEHH
T ss_pred EEcCc----cccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccccccC--CCCcchh
Confidence 88852 12221 1211112334443 689999976 357899987764221 1010000
Q ss_pred ---CCCCCCCCEEEEEC--CEEEEEecCCCeEEEEECCCCc
Q 013797 321 ---AETGKSPPLIAVVN--NELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 321 ---~~~~r~~~~~~~~~--g~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.-.+....++...+ |.+|.+-| +..++||..+..
T Consensus 166 ~~w~g~p~~idaAf~~~~~g~~YfFkg--~~y~~~~~~~~~ 204 (218)
T 1gen_A 166 DAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSLK 204 (218)
T ss_dssp HHSSSCCSSCSEEEECTTTCEEEEEET--TEEEEEETTEEE
T ss_pred hccCCCCCCCCEEEEEcCCCcEEEEEC--CEEEEEECCcee
Confidence 00122223344444 89999966 689999987543
No 276
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=74.69 E-value=41 Score=29.02 Aligned_cols=134 Identities=16% Similarity=0.157 Sum_probs=67.8
Q ss_pred eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe--EeC----CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEE
Q 013797 230 CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW--DSL----PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYD 303 (436)
Q Consensus 230 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W--~~~----~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD 303 (436)
.++.+|++-|. ..++++.....+ ..+ +.+|.. --++...++++|++-| +..++|+
T Consensus 27 ~~g~~yfFkg~---------~~Wr~~~~~~~~~p~~Is~~wpgLP~~--IDAA~~~~~~~yfFkG--------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD--------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEETT---------EEEESSSSSCTTCCEEGGGTCTTSCSS--CSEEEEETTEEEEEET--------TEEEEEE
T ss_pred CCCcEEEEeCC---------EEEEEcCCCCCCCceEhhhhccCCCCC--ccEEEEECCcEEEecC--------CEEEEEe
Confidence 47889988653 255555433221 111 123322 2234446999999976 3578898
Q ss_pred CCCCcEEEcCCCCCCC----CCCCC--CC-CCEEEEE--CCEEEEEecCCCeEEEEECCC---CcEEEcccCCCccCCCC
Q 013797 304 EYAGTWYHIPDILKDF----PAETG--KS-PPLIAVV--NNELYSLETSSNELRVYLKDS---NSWKNLGLVPVRADFNR 371 (436)
Q Consensus 304 ~~~~~W~~v~~~~~~~----~~~~~--r~-~~~~~~~--~g~lyv~gg~~~~i~~yd~~~---~~W~~v~~~p~~~~~~~ 371 (436)
..++ .+..+.-|... ..+.. .. --++... ++++|++-| +..|+||..+ ..|...+.+|..
T Consensus 88 ~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~P~~i~~~~~g~p~~----- 159 (219)
T 1hxn_A 88 TKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--RRLWWLDLKSGAQATWTELPWPHEK----- 159 (219)
T ss_dssp CSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--TEEEEEEGGGGGGCCCEEECCSCSC-----
T ss_pred CCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--CEEEEEeCCCCceEhhhcCCCCCCC-----
Confidence 6542 12222111110 11111 11 2223322 579999976 6899999754 234433222211
Q ss_pred CceEEEEE-----------eCCEEEEEcCCC
Q 013797 372 GWGIAFKS-----------LGNELLVIGASS 391 (436)
Q Consensus 372 ~~~~~~~~-----------~~~~l~v~GG~~ 391 (436)
..+++.. .++.+|+|-|..
T Consensus 160 -vdAa~~~~~~~~~~~~~~~~~~~YFFkg~~ 189 (219)
T 1hxn_A 160 -VDGALCMEKPLGPNSCSTSGPNLYLIHGPN 189 (219)
T ss_dssp -CSEEEEESSCSSSCCSCSSSCEEEEEETTE
T ss_pred -cCEEEEccccccccceeccCCeEEEEECCE
Confidence 1234331 456799987764
No 277
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=74.64 E-value=72 Score=31.81 Aligned_cols=150 Identities=9% Similarity=-0.004 Sum_probs=78.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEe-CCC--C---CCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFK-GPS--M---RRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~-l~~--~---p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
++.+++.|+. ...+.+||..+++-.. +.. + .+...-.+++.. +++.++.|+.+ ..+.++|..+.
T Consensus 201 dg~~las~s~--D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-------~~v~lWd~~~~ 271 (611)
T 1nr0_A 201 DGSLFASTGG--DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-------KTIKIWNVATL 271 (611)
T ss_dssp TSSEEEEEET--TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTT
T ss_pred CCCEEEEEEC--CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-------CeEEEEeCCCC
Confidence 5666666653 3568899988876533 211 0 111111122222 56666666643 35888999887
Q ss_pred CeEeCCCCccC-CcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCE
Q 013797 260 SWDSLPGMRQR-RKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNE 336 (436)
Q Consensus 260 ~W~~~~~~p~~-r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~ 336 (436)
+....-..... ......+..++...+.++.+ ..+..+|+.+..-... +. ........+.+ +++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------~~i~~~~~~~~~~~~~--~~------gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISAN------GFINFVNPELGSIDQV--RY------GHNKAITALSSSADGK 337 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETT------CCEEEEETTTTEEEEE--EC------CCSSCEEEEEECTTSS
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCC------CcEEEEeCCCCCcceE--Ec------CCCCCEEEEEEeCCCC
Confidence 65432111111 11122334466666666533 3467888876652221 11 00011111222 567
Q ss_pred EEEEecCCCeEEEEECCCCcEEE
Q 013797 337 LYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 337 lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
.++.++..+.|.+||..+..-..
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCCCcEEEEECCCCceee
Confidence 77777778899999998765543
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=74.37 E-value=72 Score=33.02 Aligned_cols=157 Identities=12% Similarity=0.004 Sum_probs=82.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCC--CE--EeCCCCCCCCcccEEE-EeCCEEEEEcCcCCCCCCccceEEEEeCCC-CC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETN--NW--FKGPSMRRPRCLFASA-TCGTFAFVAGGHGMDGSGVLNSAERYNPET-KS 260 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~--~W--~~l~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~ 260 (436)
+..|++.......+.++++|..+. ++ +.+.+-.. ...+... ..++.+|+....+.. ....++++|..+ ..
T Consensus 282 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~a---~~~~L~~~d~~~~~~ 357 (751)
T 2xe4_A 282 TNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGGA---VNHKLLIAPRGQPSD 357 (751)
T ss_dssp SSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTTC---TTCEEEEEETTSTTC
T ss_pred CCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCCC---CCcEEEEEcCCCccc
Confidence 345555544444578999999875 46 65543211 1112222 237788888654311 234688899876 67
Q ss_pred eEe-C-CCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEEC-------CCCc-EEEcCCCCCCCCCCCCCCCCEE
Q 013797 261 WDS-L-PGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDE-------YAGT-WYHIPDILKDFPAETGKSPPLI 330 (436)
Q Consensus 261 W~~-~-~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~-------~~~~-W~~v~~~~~~~~~~~~r~~~~~ 330 (436)
|+. + +.-. ..........++.|++....++ ...++++|+ .++. -+.+. ++. . +..+
T Consensus 358 ~~~~li~~~~-~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~------~--~~~~ 423 (751)
T 2xe4_A 358 WSHVLVDHSE-DVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLREVV-MEE------P--IFTV 423 (751)
T ss_dssp CCCEEECCCS-SEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEECC-CCC------S--SCEE
T ss_pred ceeeEECCCC-CcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceEEC-CCC------c--eeEE
Confidence 875 3 3211 1111223344677777654332 456788886 3444 44443 221 1 1111
Q ss_pred EE-------EC-CEEEEEe-cC--CCeEEEEECCCCcEEEcc
Q 013797 331 AV-------VN-NELYSLE-TS--SNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 331 ~~-------~~-g~lyv~g-g~--~~~i~~yd~~~~~W~~v~ 361 (436)
.. .+ +.+++.. .. ...++.||..+++.+.+.
T Consensus 424 ~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 424 HLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred EeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 11 12 3343332 21 347899999888777665
No 279
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=74.20 E-value=79 Score=32.03 Aligned_cols=104 Identities=8% Similarity=-0.108 Sum_probs=49.4
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC-------CCeEEEEECCCCCEEeCCCCCCCC--
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE-------GGVIWRYELETNNWFKGPSMRRPR-- 222 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-------~~~v~~ydp~t~~W~~l~~~p~~r-- 222 (436)
..++.+|+.+++-..+......... .......+-+|..++++.... ...++++|..+++-+.+.......
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~-~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 115 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESL-RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAK 115 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTT-TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCC
T ss_pred CCEEEEECCCCcEEEEecccccccc-ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccc
Confidence 3567778777655443222111000 011112334555444443211 268999999998876665433211
Q ss_pred cccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 223 CLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 223 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
.......=+++.++++.. ..++++|..++.-..+
T Consensus 116 ~~~~~~SPdG~~la~~~~--------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--------TEEEEESSSSSCCEEE
T ss_pred ccccEECCCCCEEEEEEC--------CeEEEEECCCCceEEE
Confidence 111111124433333221 2577888777665544
No 280
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=74.11 E-value=51 Score=29.85 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=27.0
Q ss_pred CCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE-EeCCEEEEEceecCCCeEEEEECCCCC
Q 013797 150 GDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEIEGGVIWRYELETNN 211 (436)
Q Consensus 150 ~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~v~~ydp~t~~ 211 (436)
....+..||..+.+.... +..+. ....+++ ..++..++.|+. ...+.+||.....
T Consensus 96 ~D~~v~lwd~~~~~~~~~--~~~h~---~~v~~v~~sp~~~~l~s~~~--d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKR--FVGHQ---SEVYSVAFSPDNRQILSAGA--EREIKLWNILGEC 151 (343)
T ss_dssp TTSEEEEEETTSSCEEEE--EECCC---SCEEEEEECSSTTEEEEEET--TSCEEEEESSSCE
T ss_pred CCCcEEEEECCCCcEEEE--EcCCC---CcEEEEEECCCCCEEEEEcC--CCEEEEEeccCCc
Confidence 456778889877654321 11110 0001112 224445555553 3568888886443
No 281
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=74.05 E-value=61 Score=30.90 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=70.0
Q ss_pred CCCEEe--CCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEE-EEeCC-----CCCe-EeCCCCccCC--cceeEE
Q 013797 209 TNNWFK--GPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAE-RYNPE-----TKSW-DSLPGMRQRR--KLCSGC 277 (436)
Q Consensus 209 t~~W~~--l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~-~yd~~-----t~~W-~~~~~~p~~r--~~~~~~ 277 (436)
.+.|++ |+-.|..-.-|+.+.+++.-|++|=.+++- ....+= .|-+. ...= +.++.- ..+ ..+..-
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv--~PRe~G~~yfs~~~~sp~~~vrr~i~se-y~~~AsEPCvk 345 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDV--APREVGLFYFPDAFNSPSNYVRRQIPSE-YEPDASEPCIK 345 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSS--SSCEEEEEEETTTTTCTTCCEEEECCGG-GCTTEEEEEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCC--CcceeeEEEecccccCCcceeeeechhh-hccccccchhh
Confidence 445754 455565556678888888888887666543 222222 22222 1111 222221 111 123344
Q ss_pred EECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEec
Q 013797 278 YMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLET 342 (436)
Q Consensus 278 ~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg 342 (436)
..+|+||+..--......-..+..-+.....|..+.-... ..+...-.+.+++.||++|.
T Consensus 346 yYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~n-----vHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHN-----VHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTC-----CCSSCCCEEEETTEEEEEEE
T ss_pred hhCCEEEEEecCcCCCCCcceeeeecccCCchhheecccc-----ccccCCCcceeCCEEEEEec
Confidence 6899999986433332244566777777788988753221 12223335788999999974
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=74.05 E-value=52 Score=29.93 Aligned_cols=173 Identities=14% Similarity=0.206 Sum_probs=86.7
Q ss_pred CCCEEeCCCCCCCCcccEEEEe-CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCc-cCC-cceeEEEECCEEEE
Q 013797 209 TNNWFKGPSMRRPRCLFASATC-GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMR-QRR-KLCSGCYMDNKFYV 285 (436)
Q Consensus 209 t~~W~~l~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p-~~r-~~~~~~~~~g~iyv 285 (436)
-.+|+.+.. +......++... .+.+|++|.. + .+++-.-.-.+|+.+.... .+. ...+..+.++.+|+
T Consensus 24 g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~---g-----~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~ 94 (327)
T 2xbg_A 24 YNPWEAIQL-PTTATILDMSFIDRHHGWLVGVN---A-----TLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWI 94 (327)
T ss_dssp SCCEEEEEC-SCSSCEEEEEESSSSCEEEEETT---T-----EEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEE
T ss_pred CCCceEeec-CCCCcEEEEEECCCCcEEEEcCC---C-----eEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEE
Confidence 356888752 333323333333 4567876531 1 2443322345899885321 212 23344455778888
Q ss_pred EeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCCcEEEcccCC
Q 013797 286 IGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIA-VVNNELYSLETSSNELRVYLKDSNSWKNLGLVP 364 (436)
Q Consensus 286 ~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p 364 (436)
+|. ...++.-+-.-.+|+.+..... .+.....++ .-++++|+.+. .+.+++-+-...+|+.+....
T Consensus 95 ~g~-------~g~i~~S~DgG~tW~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~ 161 (327)
T 2xbg_A 95 VGE-------PPIMLHTTDGGQSWSQIPLDPK-----LPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEA 161 (327)
T ss_dssp EEE-------TTEEEEESSTTSSCEECCCCTT-----CSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSC
T ss_pred EEC-------CCeEEEECCCCCCceECccccC-----CCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCC
Confidence 763 1234443323568999874321 010112233 34678888874 455666554567899985321
Q ss_pred CccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCCCCCccCcEEee
Q 013797 365 VRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSSDAGELQWRLLE 418 (436)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~ 418 (436)
. ...++++. ..+++++++|... . +|.-. |.+..+|+.+.
T Consensus 162 -~---~~~~~~~~-~~~~~~~~~g~~G-----~--~~~S~---d~gG~tW~~~~ 200 (327)
T 2xbg_A 162 -I---GVMRNLNR-SPSGEYVAVSSRG-----S--FYSTW---EPGQTAWEPHN 200 (327)
T ss_dssp -C---CCEEEEEE-CTTSCEEEEETTS-----S--EEEEE---CTTCSSCEEEE
T ss_pred -C---cceEEEEE-cCCCcEEEEECCC-----c--EEEEe---CCCCCceeECC
Confidence 1 11222221 2356777766332 1 33211 33345888875
No 283
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=72.80 E-value=1.1e+02 Score=32.98 Aligned_cols=179 Identities=15% Similarity=0.048 Sum_probs=90.9
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCC---------
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRP--------- 221 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~--------- 221 (436)
...+|.+|+....-..+..... .. ....+.+|..++++. ...++++|+.+.+-..+..-...
T Consensus 225 ~~~l~~~~~~g~~~~~l~~~~~---~~---~~~~SpDG~~la~~~---~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~ 295 (1045)
T 1k32_A 225 FGQIYSTDLDGKDLRKHTSFTD---YY---PRHLNTDGRRILFSK---GGSIYIFNPDTEKIEKIEIGDLESPEDRIISI 295 (1045)
T ss_dssp SCEEEEEETTSCSCEECCCCCS---SC---EEEEEESSSCEEEEE---TTEEEEECTTTCCEEECCCCCCCBCCSEEEEC
T ss_pred ceEEEEEeCCCCcceEecCCCC---cc---eeeEcCCCCEEEEEe---CCEEEEecCCceEeeeeccCcccccccccccc
Confidence 3467777776655444433221 10 113344555444432 45789999866665544331100
Q ss_pred CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEE
Q 013797 222 RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 222 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v 299 (436)
.....++.. +++..+++. ...++++|..+..-..+...+.......+.. +|+.+++.+. ...+
T Consensus 296 ~~v~~~~~S~pdG~~la~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l 360 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVS--------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDF 360 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEE--------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEE
T ss_pred cccceeeecCCCCCEEEEEE--------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCce
Confidence 012223222 343333322 1257888887776655533222111111223 6655444432 2467
Q ss_pred E-EEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEcc
Q 013797 300 E-AYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLETSSNELRVYLKDSNSWKNLG 361 (436)
Q Consensus 300 ~-~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~~~~i~~yd~~~~~W~~v~ 361 (436)
+ .||..++.-..+.... . ....++. -+|+.++++...+.+++||.++++-+.+.
T Consensus 361 ~~~~d~~~~~~~~l~~~~-------~-~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 361 LGIYDYRTGKAEKFEENL-------G-NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEETTTCCEEECCCCC-------C-SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCceEecCCc-------c-ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 8 8999888766655111 1 1111222 26666666666779999999988776653
No 284
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=72.61 E-value=81 Score=31.46 Aligned_cols=145 Identities=9% Similarity=-0.007 Sum_probs=76.5
Q ss_pred EEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe-CCC
Q 013797 190 LIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS-LPG 266 (436)
Q Consensus 190 iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~ 266 (436)
.++.|+. ...+.+||..+.+... .+........++.+ ++.+++.|+.++ .+.++|..+++-.. +..
T Consensus 162 ~l~s~s~--D~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~-------~i~lwd~~~g~~~~~~~~ 230 (611)
T 1nr0_A 162 RIISGSD--DNTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG-------TIVLYNGVDGTKTGVFED 230 (611)
T ss_dssp EEEEEET--TSCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEECBC
T ss_pred EEEEEeC--CCeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC-------cEEEEECCCCcEeeeecc
Confidence 4555553 3468888876654332 12211122222223 567777776543 47889988776432 211
Q ss_pred Ccc---CCcc-eeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 013797 267 MRQ---RRKL-CSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSL 340 (436)
Q Consensus 267 ~p~---~r~~-~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~ 340 (436)
... .... ...+.+ ++++.+.++.+ ..+..+|+.+.+....-.... ........+..++..++.
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWNVATLKVEKTIPVGT-----RIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCS-----SGGGCEEEEEECSSCEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEeCCCCceeeeecCCC-----CccceeEEEEEcCCEEEE
Confidence 000 1111 112222 67777777643 468899998876544222210 000111223346666666
Q ss_pred ecCCCeEEEEECCCCc
Q 013797 341 ETSSNELRVYLKDSNS 356 (436)
Q Consensus 341 gg~~~~i~~yd~~~~~ 356 (436)
++..+.+..||+.+..
T Consensus 300 ~s~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 300 ISANGFINFVNPELGS 315 (611)
T ss_dssp EETTCCEEEEETTTTE
T ss_pred EeCCCcEEEEeCCCCC
Confidence 7777889999988765
No 285
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=72.44 E-value=59 Score=29.81 Aligned_cols=89 Identities=10% Similarity=0.059 Sum_probs=46.3
Q ss_pred CC-EEEEEecCCC-----eEEEEECC-CCcEEEccc-CCCccCCCCCceEEEEE---eCCEEEEEcCCCCCCCCcEEEEe
Q 013797 334 NN-ELYSLETSSN-----ELRVYLKD-SNSWKNLGL-VPVRADFNRGWGIAFKS---LGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 334 ~g-~lyv~gg~~~-----~i~~yd~~-~~~W~~v~~-~p~~~~~~~~~~~~~~~---~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
+| .||+.....+ .|.+|+.+ +++.+.+.. .+.. .....++++.. -|+.||+.+..+ ..+.+|.
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~--~~~~~~~a~sp~~~dg~~l~v~~~~~----~~v~v~~ 338 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP--TSGGHSNAVSPCPWSDEWMAITDDQE----GWLEIYR 338 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS--SCCTTCCCEEECTTCTTEEEEECSSS----CEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC--CCCcccceecCCCcCCCEEEEEEcCC----CeEEEEE
Confidence 45 5666543233 79999885 566554221 1111 01112344334 356676665433 4688886
Q ss_pred ecCCCCCCccCcEEeecCCCCCCceeeeeEEe
Q 013797 403 CCPSSDAGELQWRLLECGKRPLSHFIHNCSVM 434 (436)
Q Consensus 403 ~~p~~d~~~~~W~~l~~~~~~~~~~~~~~~~~ 434 (436)
.+++ .=+.+...+.|.+.+..+|+-+
T Consensus 339 ~~~~------~l~~~~~~~~~~p~~~~~~~~~ 364 (365)
T 1jof_A 339 WKDE------FLHRVARVRIPEPGFGMNAIWY 364 (365)
T ss_dssp EETT------EEEEEEEEECCSTTEEEEEEEE
T ss_pred Echh------hCceeeEEEcCCCcceeeeEec
Confidence 6643 1122333446778888877654
No 286
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=71.66 E-value=69 Score=30.28 Aligned_cols=59 Identities=19% Similarity=0.108 Sum_probs=32.7
Q ss_pred CeEEEEecCCCCeEeCCCCCC-CC----CccCCCeeeEE-eCCEEEEEceecCCCeEEEEECCCCCEE
Q 013797 152 SSWWAFDRHFQTRRKLPELPS-DP----CFKLGDKESLC-AGTHLIVSGNEIEGGVIWRYELETNNWF 213 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~-~~----~~~~~~~~~~~-~~~~iyv~GG~~~~~~v~~ydp~t~~W~ 213 (436)
+.+..+|+.+.+-..--+++. .+ .... ...++ -+..+|+... ...+.+.+.|..+++-.
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~--~~a~spDGk~lyVan~-~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPW--MTSLTPDGKTLLFYQF-SPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGG--GEEECTTSSEEEEEEC-SSSCEEEEEETTTTEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCc--eEEEcCCCCEEEEEEc-CCCCeEEEEECCCCcEE
Confidence 457889998877543222221 11 0011 01222 3667888632 22468999999998743
No 287
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=71.53 E-value=66 Score=30.00 Aligned_cols=75 Identities=9% Similarity=-0.113 Sum_probs=38.3
Q ss_pred cCccCCeEEEecc---------CCCeEEEEecCCCCeEeCCCCC-CCCC---ccCCCeeeEEeCCEEEEEceecCCCeEE
Q 013797 137 IGFREPSVFMLAS---------GDSSWWAFDRHFQTRRKLPELP-SDPC---FKLGDKESLCAGTHLIVSGNEIEGGVIW 203 (436)
Q Consensus 137 ~~~~~~~l~~~~~---------~~~~~~~~dp~~~~W~~l~~~~-~~~~---~~~~~~~~~~~~~~iyv~GG~~~~~~v~ 203 (436)
.+.....+|+... ..+.+..||+.+.+-..--+++ ..+. ..........-+..||+... ...+.+.
T Consensus 73 ~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~-~~~~~v~ 151 (373)
T 2mad_H 73 AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF-AAGPAVG 151 (373)
T ss_pred ECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEec-CCCCeEE
Confidence 3445566776542 2456889999875433211222 0000 00011112224667887642 1246799
Q ss_pred EEECCCCCEE
Q 013797 204 RYELETNNWF 213 (436)
Q Consensus 204 ~ydp~t~~W~ 213 (436)
++| .+++-.
T Consensus 152 viD-~t~~~~ 160 (373)
T 2mad_H 152 LVV-QGGSSD 160 (373)
T ss_pred EEE-CCCCEE
Confidence 999 888754
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.26 E-value=81 Score=30.94 Aligned_cols=200 Identities=10% Similarity=0.021 Sum_probs=99.2
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEE---------eCCEEEEEceec----CCCeEEEEECC
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLC---------AGTHLIVSGNEI----EGGVIWRYELE 208 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~---------~~~~iyv~GG~~----~~~~v~~ydp~ 208 (436)
..||++......+.++|+..+.-..+....... +... ..++. .++.||+..-.. ....+++++..
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~-~~~p-~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP-TNRI-RSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSS-CSBE-EEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccc-cCCC-cEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecC
Confidence 345665555567888999988887765543311 1110 11222 245688874322 12357888765
Q ss_pred C-CCEE------eCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCC-------CCC-eEeCC------
Q 013797 209 T-NNWF------KGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPE-------TKS-WDSLP------ 265 (436)
Q Consensus 209 t-~~W~------~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~-------t~~-W~~~~------ 265 (436)
. ++|. .++.+. ..+.+++. ++.||+.--. ...+.+||+. +.+ |+...
T Consensus 230 ~~G~~~~~~~~~~v~~~~---~p~giavdp~~g~LYvtd~~-------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 230 ADGTFDDRSDIQLIAAYK---QCNGATIHPINGELYFNSYE-------KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp TTSCCSTTSCEEEEEEES---CCCCEEECTTTCCEEEEETT-------TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CCCceeecccceeeccCC---CceEEEEcCCCCeEEEEECC-------CCEEEEEecccccccccCceeecccccccccc
Confidence 5 3452 333222 22344443 5788887532 2358999997 554 43211
Q ss_pred -----CCccCCcceeEEEE-CCE-EEEEeccCCCCCcCCEEEEEE--CCCCcE---EEcCCC-CC----CCC-CCCCCCC
Q 013797 266 -----GMRQRRKLCSGCYM-DNK-FYVIGGRNEKDKPLTCGEAYD--EYAGTW---YHIPDI-LK----DFP-AETGKSP 327 (436)
Q Consensus 266 -----~~p~~r~~~~~~~~-~g~-iyv~gG~~~~~~~~~~v~~yD--~~~~~W---~~v~~~-~~----~~~-~~~~r~~ 327 (436)
..+........++. +|+ ||+..- ..+.|+++| ..+... +.+... .. +.. .......
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~------~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVI------NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEET------TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeC------CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 11111111223332 444 888853 345677754 444432 122111 00 000 0011122
Q ss_pred CE--EEEE--------CCEEEEEecCCCeEEEEECCCCcEEEc
Q 013797 328 PL--IAVV--------NNELYSLETSSNELRVYLKDSNSWKNL 360 (436)
Q Consensus 328 ~~--~~~~--------~g~lyv~gg~~~~i~~yd~~~~~W~~v 360 (436)
+. +++. ++.||+.....+.|.++++.. .-+.+
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~Ti 415 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTY 415 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEE
Confidence 33 3442 468999987778999999654 44444
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=70.20 E-value=96 Score=31.33 Aligned_cols=172 Identities=10% Similarity=-0.039 Sum_probs=97.7
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++.||+.. .....++++++.....+.+-...... -..+++ .++.||+.-. ....+++.++....-+.+
T Consensus 360 ~~~ly~sD--~~~~~I~r~~~~g~~~~~v~~~~~~~-p~GlAvD~~~~~lY~tD~-------~~~~I~v~~~~G~~~~~l 429 (619)
T 3s94_A 360 EGYIYWTD--DEVRAIRRSFIDGSGSQFVVTAQIAH-PDGIAVDWVARNLYWTDT-------GTDRIEVTRLNGTMRKIL 429 (619)
T ss_dssp TTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSC-CCEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEE
T ss_pred CCeEEEEe--CCCCeEEEEEcCCCccEEEEECCCCC-cCceEEecccCcEEEEeC-------CCCcEEEEeCCCCeEEEE
Confidence 68999874 23468999999876665543222111 123444 4789999843 234688888876543333
Q ss_pred C--CCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 013797 265 P--GMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELY 338 (436)
Q Consensus 265 ~--~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~ly 338 (436)
. .+..|+ +.++. +|.||+..-. ....|+..++....=..+..-. .....++++. +++||
T Consensus 430 ~~~~l~~P~---~iavdp~~G~ly~tD~g-----~~~~I~r~~~dG~~~~~l~~~~-------l~~P~GlalD~~~~~LY 494 (619)
T 3s94_A 430 ISEDLEEPR---AIVLDPMVGYMYWTDWG-----EIPKIERAALDGSDRVVLVNTS-------LGWPNGLALDYDEGKIY 494 (619)
T ss_dssp ECTTCCSEE---EEEEETTTTEEEEEECS-----SSCEEEEEETTSCSCEEEECSS-------CSCEEEEEEETTTTEEE
T ss_pred EECCCCCee---eEEEEcCCCcEEEecCC-----CCCEEEEEccCCCccEEEEeCC-------CCCCeeeEEcccCCEEE
Confidence 2 222222 33443 5899998521 1346788877644322222110 0112234554 68999
Q ss_pred EEecCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcC
Q 013797 339 SLETSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGA 389 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG 389 (436)
+.....+.|+.+|++...=+.+.. ... ..-++++ ..++.||+.--
T Consensus 495 ~aD~~~~~I~~~~~dG~~~~~~~~-~~l---~~P~gla--v~~~~ly~tD~ 539 (619)
T 3s94_A 495 WGDAKTDKIEVMNTDGTGRRVLVE-DKI---PHIFGFT--LLGDYVYWTDW 539 (619)
T ss_dssp EEETTTTEEEEEESSSCCCEEEEE-CCC---CSSCCEE--EETTEEEEECT
T ss_pred EEECCCCEEEEEecCCCceEEEec-cCC---CCcEEEE--EECCEEEEeec
Confidence 999888899999987644333321 011 1123455 67889998853
No 290
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=70.12 E-value=51 Score=28.12 Aligned_cols=145 Identities=10% Similarity=0.043 Sum_probs=74.6
Q ss_pred EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEe--C----CCCccCCcceeEEE-E--CCEEEEEeccCCCCCcC
Q 013797 226 ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDS--L----PGMRQRRKLCSGCY-M--DNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 226 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~--~----~~~p~~r~~~~~~~-~--~g~iyv~gG~~~~~~~~ 296 (436)
+++...+.+|++=|. .+++++.....+.. + +.+|. ...|++ . ++++|++-|
T Consensus 28 Ai~~~~g~~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG-------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKDR---------FFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG-------- 87 (207)
T ss_dssp EEEEETTEEEEEETT---------EEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET--------
T ss_pred EEEeCCCcEEEEECC---------EEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc--------
Confidence 455678999999553 36667654433221 1 23342 223333 3 689999976
Q ss_pred CEEEEEECCCCcE---EEcCCCCCCCCCCCCCCCCEEEEE---CCEEEEEecCCCeEEEEECCCCcEEEcccCCCcc---
Q 013797 297 TCGEAYDEYAGTW---YHIPDILKDFPAETGKSPPLIAVV---NNELYSLETSSNELRVYLKDSNSWKNLGLVPVRA--- 367 (436)
Q Consensus 297 ~~v~~yD~~~~~W---~~v~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~--- 367 (436)
+.+++|+..+-.- ..|..+ ..|..-...-+++. +|++|++-| +..|+||..+++= ...-|...
T Consensus 88 ~~~w~~~~~~~~~gyPk~I~~~----GlP~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~--d~gyPr~i~~~ 159 (207)
T 1pex_A 88 RKFWALNGYDILEGYPKKISEL----GLPKEVKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIM--DKDYPRLIEED 159 (207)
T ss_dssp TEEEEESTTCCCTTCSEESTTT----TCCTTCCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEE--CSSCCCBHHHH
T ss_pred CEEEEEeCCeeccCCceecccc----CCCCCCccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccc--cCCCCccHHHc
Confidence 3467776332110 122221 11111012223332 479999976 7899999876431 11111110
Q ss_pred --CCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCCC
Q 013797 368 --DFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPSS 407 (436)
Q Consensus 368 --~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~~ 407 (436)
.......+|+ ..++++|+|-|.. .|.|++..
T Consensus 160 ~~Gip~~iDaAf-~~~g~~YfFkg~~--------y~rf~~~~ 192 (207)
T 1pex_A 160 FPGIGDKVDAVY-EKNGYIYFFNGPI--------QFEYSIWS 192 (207)
T ss_dssp STTSCSCCSEEE-EETTEEEEEETTE--------EEEEETTT
T ss_pred CCCCCCCccEEE-EcCCcEEEEECCE--------EEEEeCCc
Confidence 0011122444 4689999997765 56666543
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=69.40 E-value=60 Score=28.67 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=59.3
Q ss_pred CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCc--
Q 013797 280 DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNS-- 356 (436)
Q Consensus 280 ~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~-- 356 (436)
++.||++... ...++.+|+....+..++--. .....+++.. +|.+++.....+.+.+|+...+.
T Consensus 38 ~~~L~aV~d~------~~~I~~ld~~g~v~~~i~l~g-------~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 38 SNTLFSTINK------PAAIVEMTTNGDLIRTIPLDF-------VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp TTEEEEEEET------TEEEEEEETTCCEEEEEECSS-------CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred CCEEEEEECC------CCeEEEEeCCCCEEEEEecCC-------CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 5789998752 356899999977777764211 1122344544 45666665455788888766543
Q ss_pred EEE-cccCCC--ccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeec
Q 013797 357 WKN-LGLVPV--RADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCC 404 (436)
Q Consensus 357 W~~-v~~~p~--~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~ 404 (436)
|.. ...++. .......-|++....+++||+.-... ...+|.++
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-----p~~i~~~~ 150 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-----PIEVYKVN 150 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-----SEEEEEEE
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-----CceEEEEc
Confidence 421 111221 11112234556545577899976554 23456554
No 292
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=68.38 E-value=69 Score=28.95 Aligned_cols=103 Identities=6% Similarity=-0.017 Sum_probs=49.9
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEECCCCc
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDEYAGT 308 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~ 308 (436)
++.+++.|+.+ ..+.++|..+++.... +.........+.+ +++..+.|+.+ ..+..||+....
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~~~~ 151 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE------REIKLWNILGEC 151 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT------SCEEEEESSSCE
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC------CEEEEEeccCCc
Confidence 45555565543 3588899988764221 1101111112222 56666666643 357888886443
Q ss_pred EEEcCCCCCCCCCCCCCCCCEEEEE--C----------CEEEEEecCCCeEEEEECCC
Q 013797 309 WYHIPDILKDFPAETGKSPPLIAVV--N----------NELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 309 W~~v~~~~~~~~~~~~r~~~~~~~~--~----------g~lyv~gg~~~~i~~yd~~~ 354 (436)
-........ .......+.. + +.+++.++..+.|.+||...
T Consensus 152 ~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 203 (343)
T 2xzm_R 152 KFSSAEKEN------HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF 203 (343)
T ss_dssp EEECCTTTS------CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT
T ss_pred eeeeecccC------CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC
Confidence 322221110 0001111111 1 24566677788899999543
No 293
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=67.32 E-value=67 Score=33.06 Aligned_cols=147 Identities=11% Similarity=-0.036 Sum_probs=79.6
Q ss_pred CCeEEEEecCCC--C-eEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecC-CCeEEEEECCC--CCEEeCCCCCCCCcc
Q 013797 151 DSSWWAFDRHFQ--T-RRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIE-GGVIWRYELET--NNWFKGPSMRRPRCL 224 (436)
Q Consensus 151 ~~~~~~~dp~~~--~-W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~-~~~v~~ydp~t--~~W~~l~~~p~~r~~ 224 (436)
...++.+|..+. . +..+..-.... . ..+...++.||+...... ...++++|..+ ..|+.+-+-... ..
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~-~----~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l 366 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQ-W----DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NL 366 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSC-E----EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EE
T ss_pred cceEEEEECCCCCCcccEEecCCCCce-E----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eE
Confidence 457888888766 5 76664322111 0 112345777887754332 35799999988 578877532211 11
Q ss_pred cEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEE--CCE-EEEE-eccCCCCCcCCEEE
Q 013797 225 FASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYM--DNK-FYVI-GGRNEKDKPLTCGE 300 (436)
Q Consensus 225 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~-iyv~-gG~~~~~~~~~~v~ 300 (436)
..+...++++++....++ ...++++|...+.-+.+. +|... ....+.. ++. |++. .+.. ....++
T Consensus 367 ~~~~~~~~~lv~~~~~dg-----~~~l~~~~~~g~~~~~l~-~~~~~-~v~~~~~s~d~~~l~~~~ss~~----~P~~i~ 435 (741)
T 1yr2_A 367 ESVGIAGNRLFASYIHDA-----KSQVLAFDLDGKPAGAVS-LPGIG-SASGLSGRPGDRHAYLSFSSFT----QPATVL 435 (741)
T ss_dssp EEEEEEBTEEEEEEEETT-----EEEEEEEETTSCEEEECB-CSSSC-EEEEEECCBTCSCEEEEEEETT----EEEEEE
T ss_pred EEEEEECCEEEEEEEECC-----EEEEEEEeCCCCceeecc-CCCCe-EEEEeecCCCCCEEEEEEcCCC----CCCEEE
Confidence 123334778877765442 346888887554344442 22111 1111111 333 4333 2211 345789
Q ss_pred EEECCCCcEEEcCC
Q 013797 301 AYDEYAGTWYHIPD 314 (436)
Q Consensus 301 ~yD~~~~~W~~v~~ 314 (436)
.||+.+++.+.+..
T Consensus 436 ~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 436 ALDPATAKTTPWEP 449 (741)
T ss_dssp EEETTTTEEEECSC
T ss_pred EEECCCCcEEEEec
Confidence 99999988777654
No 294
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=66.61 E-value=78 Score=28.94 Aligned_cols=159 Identities=10% Similarity=0.015 Sum_probs=71.6
Q ss_pred CCEEEEEceecCCCeEEEEECC-CCCEEeCCCC--CC-CCcccEEEEe-CC-EEEEEcCcCCCCCCccceEEE--EeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELE-TNNWFKGPSM--RR-PRCLFASATC-GT-FAFVAGGHGMDGSGVLNSAER--YNPET 258 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~-t~~W~~l~~~--p~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~--yd~~t 258 (436)
+..+|+.. .....+++|+.. +++...+..+ +. ...-..++.. ++ .+|+.+..+ ..+.+ +|..+
T Consensus 156 G~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~~~ 226 (365)
T 1jof_A 156 ETYLYSAD--LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-------NRICEYVIDPAT 226 (365)
T ss_dssp SSEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTT
T ss_pred CCEEEEEc--CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-------CeEEEEEEeCCC
Confidence 34566653 223579999987 7776543322 11 1111122222 34 677764322 23444 45556
Q ss_pred CCeE----eCCCCccCC---c-------ceeEEE-E--CC-EEEEEeccCCCCCcCCEEEEEECC-CCcEEEcCC-CCCC
Q 013797 259 KSWD----SLPGMRQRR---K-------LCSGCY-M--DN-KFYVIGGRNEKDKPLTCGEAYDEY-AGTWYHIPD-ILKD 318 (436)
Q Consensus 259 ~~W~----~~~~~p~~r---~-------~~~~~~-~--~g-~iyv~gG~~~~~~~~~~v~~yD~~-~~~W~~v~~-~~~~ 318 (436)
++.. .+..+|... . ....+. + +| .||+... .........+.+||+. +++...+.. .+..
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~-~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR-ANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE-ESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC-CCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 6643 233333221 1 122233 3 55 4665432 1110012368888875 566553211 1000
Q ss_pred CCCCCCCCCCEEEE---ECCEEEEEecCCCeEEEEECCCCcEE
Q 013797 319 FPAETGKSPPLIAV---VNNELYSLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 319 ~~~~~~r~~~~~~~---~~g~lyv~gg~~~~i~~yd~~~~~W~ 358 (436)
. ..++ ..++.- .+..||+.+...+.|.+|+.+.+.=+
T Consensus 306 ~--~~~~-~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~ 345 (365)
T 1jof_A 306 T--SGGH-SNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLH 345 (365)
T ss_dssp S--CCTT-CCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEE
T ss_pred C--CCcc-cceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCc
Confidence 0 0111 111122 24466666544578888887665333
No 295
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=66.52 E-value=85 Score=29.35 Aligned_cols=150 Identities=11% Similarity=-0.004 Sum_probs=81.0
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCCCE--EeC----CCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETNNW--FKG----PSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAER 253 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W--~~l----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 253 (436)
++...++.+|+|=| ..+|+++.....- ..+ +.+|. ..-++... ++++|++-|. ..|+
T Consensus 185 Av~~~~g~~~fFkg----~~~Wr~~~~~~~~~p~~I~~~wpgLP~--~iDAa~~~~~~g~~~fFkg~---------~yWr 249 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD----RFFWLKVSERPKTSVNLISSLWPTLPS--GIEAAYEIEARNQVFLFKDD---------KYWL 249 (365)
T ss_dssp CEEEETTEEEEEET----TEEEECCSSCCCCCEEEHHHHCSSCCS--SCCEEEEEGGGTEEEEEETT---------EEEE
T ss_pred eEEEcCCeEEEEeC----CEEEEEcCCCccCCccchhhhccCCCC--CccEEEEecCCCEEEEEeCC---------EEEE
Confidence 35667999999854 3678887554321 111 12332 12233333 7899998652 3677
Q ss_pred EeCCCCC--e-EeCCC--CccCCcceeEEE-E--CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCC----CC
Q 013797 254 YNPETKS--W-DSLPG--MRQRRKLCSGCY-M--DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDF----PA 321 (436)
Q Consensus 254 yd~~t~~--W-~~~~~--~p~~r~~~~~~~-~--~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~----~~ 321 (436)
|+..... + +.+.. +|..-....+++ . ++++|++-| +..++||..+++-.. .-|... +.
T Consensus 250 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~~v~~--gyPk~I~~~f~g 319 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQMMDP--GYPKLITKNFQG 319 (365)
T ss_dssp CSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECS--SCCCCHHHHSTT
T ss_pred EcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcceecC--CCCcchhhcCCC
Confidence 7643211 1 12322 232111233333 3 589999976 457999987654221 111100 00
Q ss_pred CCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEE
Q 013797 322 ETGKSPPLIAVV-NNELYSLETSSNELRVYLKDSNSWKN 359 (436)
Q Consensus 322 ~~~r~~~~~~~~-~g~lyv~gg~~~~i~~yd~~~~~W~~ 359 (436)
.+...-++... ++++|.+-| +..|+||..+.+-..
T Consensus 320 -~p~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 320 -IGPKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp -CCSSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred -CCCccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 12223344445 789999976 689999998866544
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=66.12 E-value=94 Score=29.68 Aligned_cols=151 Identities=13% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCE-EeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCC--CCCe
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNW-FKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPE--TKSW 261 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W-~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~--t~~W 261 (436)
++.||+... ....+++||+.+++- ..+.........+.++.- ++.||+.-- ....+.++|.. +...
T Consensus 239 ~G~lyv~d~--~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-------~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 239 NGKIYYTRY--HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-------GKHCIYRVDYNRETGKL 309 (433)
T ss_dssp TCCEEECBT--TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET-------TTTEEEEEEBCTTTCCB
T ss_pred CCeEEEEEC--CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC-------CCCEEEEEeCCCCCccc
Confidence 688888642 345799999987765 332211111111223332 346998843 23457776654 3322
Q ss_pred E----eCCC-----Cc-----cCC-ccee-EEE----------ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCC
Q 013797 262 D----SLPG-----MR-----QRR-KLCS-GCY----------MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDI 315 (436)
Q Consensus 262 ~----~~~~-----~p-----~~r-~~~~-~~~----------~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~ 315 (436)
. .... .. ..+ ..+. .++ .+|.||+... ..+.|.++|+ ++....+...
T Consensus 310 ~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~------~n~~I~~~~~-~G~v~t~~G~ 382 (433)
T 4hw6_A 310 AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR------DSHTVRVLTP-EGRVTTYAGR 382 (433)
T ss_dssp CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET------TTTEEEEECT-TSEEEEEECC
T ss_pred CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC------CCCEEEEECC-CCCEEEEEeC
Confidence 1 1111 00 001 1122 333 3568999864 3457888987 4555554322
Q ss_pred CC-------C--CCC-CCCCCCCEEEEE--CCEEEEEecCCCeEEEEECC
Q 013797 316 LK-------D--FPA-ETGKSPPLIAVV--NNELYSLETSSNELRVYLKD 353 (436)
Q Consensus 316 ~~-------~--~~~-~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~ 353 (436)
.. + ... .......++++. +|.||+.....+.|.+++++
T Consensus 383 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 383 GNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 11 0 000 011223456666 68999998767788888775
No 297
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=65.58 E-value=70 Score=27.99 Aligned_cols=218 Identities=10% Similarity=0.084 Sum_probs=97.4
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCCccCCCeee-EEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEE
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPCFKLGDKES-LCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASAT 229 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~-~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~ 229 (436)
...+..+|..+++..++-.+..+...- .++ ...++..++.|+. ...+.+||..+++-...-.. .........
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V---~~v~~~~~~~~l~sgs~--Dg~v~iw~~~~~~~~~~~~~--h~~~~~~~~ 116 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTS--SAEVQLWDVQQQKRLRNMTS--HSARVGSLS 116 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEEC--CSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeE---EEEEECCCCCEEEEEEC--CCcEEEeecCCceeEEEecC--ccceEEEee
Confidence 567889999988766543332221110 112 2235566666653 35788999988864332111 111222333
Q ss_pred eCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC-ccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc
Q 013797 230 CGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM-RQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT 308 (436)
Q Consensus 230 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~ 308 (436)
..+.+.+.|+..+ .+..++..+......... ............++++.+.++.+ ..+.+||..+++
T Consensus 117 ~~~~~l~s~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~ 183 (318)
T 4ggc_A 117 WNSYILSSGSRSG-------HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVWPSAPGE 183 (318)
T ss_dssp EETTEEEEEETTS-------EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEESSCBT
T ss_pred cCCCEEEEEecCC-------ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC------cceeEEECCCCc
Confidence 4455555554332 344555554432211000 00111111122355566666533 347888887653
Q ss_pred EEEcCCCCCCCCCCCCCCCC--EEEEE--CCEE-EEEe-cCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCC
Q 013797 309 WYHIPDILKDFPAETGKSPP--LIAVV--NNEL-YSLE-TSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGN 382 (436)
Q Consensus 309 W~~v~~~~~~~~~~~~r~~~--~~~~~--~g~l-yv~g-g~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 382 (436)
-........ ....++ .++.. ++.+ ++.. ...+.|.+||..+..-....... .......+...++
T Consensus 184 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 184 GGWVPLQTF-----TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-----SQVCSILWSPHYK 253 (318)
T ss_dssp TBSCCSEEE-----CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS-----SCEEEEEEETTTT
T ss_pred ccccceeee-----cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce-----eeeeeeeeccccc
Confidence 111000000 000111 11111 2333 3333 34567899998876554432211 1112233334456
Q ss_pred EEEEEcCCCCCCCCcEEEE
Q 013797 383 ELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 383 ~l~v~GG~~~~~~~~~~~y 401 (436)
.+++.+|..+ ..+.+|
T Consensus 254 ~~~~~sg~~d---~~i~iw 269 (318)
T 4ggc_A 254 ELISGHGFAQ---NQLVIW 269 (318)
T ss_dssp EEEEEECTTT---CCEEEE
T ss_pred ceEEEEEcCC---CEEEEE
Confidence 6666555432 345566
No 298
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=64.46 E-value=85 Score=31.86 Aligned_cols=145 Identities=13% Similarity=0.104 Sum_probs=74.6
Q ss_pred eeEEeCCEEEEEceecCCCeEEEEECCCC-CEE--eC----CCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEE
Q 013797 182 ESLCAGTHLIVSGNEIEGGVIWRYELETN-NWF--KG----PSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAE 252 (436)
Q Consensus 182 ~~~~~~~~iyv~GG~~~~~~v~~ydp~t~-~W~--~l----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 252 (436)
++....+.+|+|-| ..+|+++.... ... .+ +.+|.. .-++... ++++|++-|. ..|
T Consensus 448 Ait~~rg~~yfFKg----~~yWr~~~~~~~~~~P~~Is~~wp~LP~~--IDAA~~~~~~~k~yFFkG~---------~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD----RFIWRTVTPRDKPMGPLLVATFWPELPEK--IDAVYEAPQEEKAVFFAGN---------EYW 512 (631)
T ss_dssp EEEECSSSEEEECS----SEEEEESCTTSCCEEEEEGGGTCTTSCSS--CSBCCEETTTTEEEEEETT---------EEE
T ss_pred eeEecCCcEEEEcC----CEEEEEcCCCCCCCCceeccccCCCCCcc--ceEEEEECCCCEEEEEecC---------EEE
Confidence 46667889999855 36888876542 111 11 122321 1122222 6789998552 478
Q ss_pred EEeCCCC--Ce-EeCCC--CccCCcceeEEE---ECCEEEEEeccCCCCCcCCEEEEEECCCCcEE-----EcCCCCCCC
Q 013797 253 RYNPETK--SW-DSLPG--MRQRRKLCSGCY---MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY-----HIPDILKDF 319 (436)
Q Consensus 253 ~yd~~t~--~W-~~~~~--~p~~r~~~~~~~---~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~-----~v~~~~~~~ 319 (436)
+|+..+- -+ +.+.. +|.......+++ .++++|++-| +..+.||..+++=. .+......
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------~~ywryd~~~~~vd~gYPk~i~~~w~G- 583 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFPKLIADAWNA- 583 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------TEEEEEETTTTEECTTCCEETTTSCSS-
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC--------CEEEEEcCCcccccCCCCcchHhhcCC-
Confidence 8875310 01 11111 111111123333 3789999976 35789998765321 11111001
Q ss_pred CCCCCCCCCEEEEEC--CEEEEEecCCCeEEEEECCCC
Q 013797 320 PAETGKSPPLIAVVN--NELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 320 ~~~~~r~~~~~~~~~--g~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+....++...+ |++|++-| +..|+||..+.
T Consensus 584 ---~p~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~ 616 (631)
T 1ck7_A 584 ---IPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSL 616 (631)
T ss_dssp ---CCTTCCEEECCTTSCBCEEEET--TEEECCBTTBT
T ss_pred ---CCCCCcEeEEEcCCCeEEEEEC--CEEEEEeCccc
Confidence 122223333333 79999976 67888887654
No 299
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=64.11 E-value=89 Score=28.73 Aligned_cols=73 Identities=15% Similarity=0.140 Sum_probs=42.8
Q ss_pred CCEEEEEeccCCC----CCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECC
Q 013797 280 DNKFYVIGGRNEK----DKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKD 353 (436)
Q Consensus 280 ~g~iyv~gG~~~~----~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~ 353 (436)
++++|+....++. ....+.+.++|+.+.+ .+..++ ... ..+++.. +| .||+.+. +.|.+||.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~------~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIP------GRD-ALSMTIDQQRNLMLTLDG--GNVNVYDIS 333 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEE------CTT-CCEEEEETTTTEEEEECS--SCEEEEECS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEe------cCC-eeEEEECCCCCEEEEeCC--CeEEEEECC
Confidence 4789987542211 1124689999998875 344333 122 3344443 44 6676654 899999998
Q ss_pred CCcEEEcccC
Q 013797 354 SNSWKNLGLV 363 (436)
Q Consensus 354 ~~~W~~v~~~ 363 (436)
+.+=+.++.+
T Consensus 334 t~~l~~~~~i 343 (361)
T 2oiz_A 334 QPEPKLLRTI 343 (361)
T ss_dssp SSSCEEEEEE
T ss_pred CCcceeeEEe
Confidence 8633555543
No 300
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=63.68 E-value=78 Score=28.35 Aligned_cols=179 Identities=12% Similarity=0.053 Sum_probs=88.3
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCC-EEEEEceec--CCCeEEEEECCCCCEEeCCCCCCCCcccEEE
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGT-HLIVSGNEI--EGGVIWRYELETNNWFKGPSMRRPRCLFASA 228 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~--~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~ 228 (436)
..++.+|..++.-..+ .... ....+-+| .|+...... ....++++|..+++.+.+...+. .....
T Consensus 43 ~~l~~~d~~~~~~~~l-----~~~~----~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 43 NTIVIENLKNNARRFI-----ENAT----MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEETTTCCEEEE-----ESCE----EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred ceEEEEeCCCCceEEc-----ccCC----CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 4577888877765554 0000 01223244 444443222 23469999999888776654332 11222
Q ss_pred Ee-CC-EEEEEcCcC-----------------CCC--CCccceEEEEeCCCCCe-EeCCCCccCCcceeEEEE-CCEEEE
Q 013797 229 TC-GT-FAFVAGGHG-----------------MDG--SGVLNSAERYNPETKSW-DSLPGMRQRRKLCSGCYM-DNKFYV 285 (436)
Q Consensus 229 ~~-~~-~iyv~GG~~-----------------~~~--~~~~~~~~~yd~~t~~W-~~~~~~p~~r~~~~~~~~-~g~iyv 285 (436)
.. ++ .|++..... +.+ ......++++|+.+++. +.+.. + .....+.. +| +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 22 44 444443110 000 00135688999998877 55543 2 22233333 45 555
Q ss_pred EeccCCCCC--c-CCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCE-EEEEecC-------CCeEEEEECCC
Q 013797 286 IGGRNEKDK--P-LTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNE-LYSLETS-------SNELRVYLKDS 354 (436)
Q Consensus 286 ~gG~~~~~~--~-~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~-lyv~gg~-------~~~i~~yd~~~ 354 (436)
.+....... . ...++.+| ++++..+... . . ... ..-+|+ |++.+.. ...|+.+| +
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~-----~---~~~-~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V-----S---FYA-VDSDGERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E-----S---EEE-EEECSSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred EEecccccccccccccEEEeC--CCceEEeccC-c-----c---eee-ECCCCCEEEEEEccccCCccccceEEEEC--C
Confidence 553322110 1 34788888 6666665421 1 0 011 234554 5444421 34799999 6
Q ss_pred CcEEEcc
Q 013797 355 NSWKNLG 361 (436)
Q Consensus 355 ~~W~~v~ 361 (436)
++++.+.
T Consensus 252 ~~~~~l~ 258 (347)
T 2gop_A 252 KEVMGIL 258 (347)
T ss_dssp SCEEESS
T ss_pred CceEecc
Confidence 6676653
No 301
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=62.55 E-value=37 Score=29.48 Aligned_cols=102 Identities=9% Similarity=0.006 Sum_probs=56.8
Q ss_pred EeCCEEEEEceecCCCeEEEEE--CCC-C------------CEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCc
Q 013797 185 CAGTHLIVSGNEIEGGVIWRYE--LET-N------------NWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGV 247 (436)
Q Consensus 185 ~~~~~iyv~GG~~~~~~v~~yd--p~t-~------------~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 247 (436)
..++.+|+|-| +.+|+|+ +.+ + .|.-+|....+...-++... ++++|++-|.
T Consensus 70 ~~~g~~~fFKg----~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~------- 138 (227)
T 3lp9_A 70 TENNEAFIFYE----NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD------- 138 (227)
T ss_dssp CSTTEEEEEET----TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT-------
T ss_pred CCCCEEEEEeC----CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC-------
Confidence 36899999965 4789998 322 1 13333211112222233333 6899999663
Q ss_pred cceEEEEeCCCCCeEe-----CC-CCccCC-----cceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCC
Q 013797 248 LNSAERYNPETKSWDS-----LP-GMRQRR-----KLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAG 307 (436)
Q Consensus 248 ~~~~~~yd~~t~~W~~-----~~-~~p~~r-----~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~ 307 (436)
..++||..+++-.. +. .+|... ....+++. ++++|++-| +..+.||..++
T Consensus 139 --~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 --QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------DHYARVKVTPX 202 (227)
T ss_dssp --EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--------TEEEEEECCSS
T ss_pred --EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--------CEEEEEECCcc
Confidence 48899987653211 10 122111 12334443 589999976 34689998766
No 302
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=62.22 E-value=1.4e+02 Score=30.34 Aligned_cols=188 Identities=9% Similarity=0.012 Sum_probs=96.1
Q ss_pred CeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEcee----------cCCCeEEEEECCCCCE--EeCCCCC
Q 013797 152 SSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNE----------IEGGVIWRYELETNNW--FKGPSMR 219 (436)
Q Consensus 152 ~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~----------~~~~~v~~ydp~t~~W--~~l~~~p 219 (436)
..++.+|..+++..... ++.. .... .+-+-+..||..... .....+++++..|.+= ..+-..+
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~~~-k~~~---~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LKDV-KFSG---ISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EEEE-ESCC---CEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred EEEEEEECCCCCCCccc-cCCc-eecc---EEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 46778898888765431 1100 0111 122323345544322 1125688888877642 1121111
Q ss_pred C--CCcccEEEE-eCCE-EEEEcCcCCCCCCccceEEEEeCCCC--CeEeCCCCccCCcceeEEEECCEEEEEeccCCCC
Q 013797 220 R--PRCLFASAT-CGTF-AFVAGGHGMDGSGVLNSAERYNPETK--SWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKD 293 (436)
Q Consensus 220 ~--~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~ 293 (436)
. +........ -+++ |++...... ..+.++++|..+. .|+.+....... .......++.||+....+.
T Consensus 230 ~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~-- 302 (693)
T 3iuj_A 230 PAQHHRYVGATVTEDDRFLLISAANST----SGNRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRDA-- 302 (693)
T ss_dssp GGGCCSEEEEEECTTSCEEEEEEESSS----SCCEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCCC--
Confidence 1 221122222 2444 433322221 2357999998765 677663322211 1113345788998875432
Q ss_pred CcCCEEEEEECCCC---cEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecC--CCeEEEEECCCCcEEEc
Q 013797 294 KPLTCGEAYDEYAG---TWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETS--SNELRVYLKDSNSWKNL 360 (436)
Q Consensus 294 ~~~~~v~~yD~~~~---~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~--~~~i~~yd~~~~~W~~v 360 (436)
....++.+|+.+. .|+.+.+-.. . .. .+...++.|++.... ...|+++|.+++..+.+
T Consensus 303 -~~~~l~~~d~~~~~~~~~~~l~~~~~-----~--~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 303 -PNRRLVTVDAANPGPAHWRDLIPERQ-----Q--VL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV 365 (693)
T ss_dssp -TTCEEEEEETTSCCGGGCEEEECCCS-----S--CE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred -CCCEEEEEeCCCCCccccEEEecCCC-----C--EE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe
Confidence 3457899998764 4887654331 1 11 445556677665422 23789999987766665
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=61.58 E-value=1.4e+02 Score=30.10 Aligned_cols=147 Identities=11% Similarity=-0.029 Sum_probs=85.8
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCCEEeCC--CCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNNWFKGP--SMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
.++.||+.. .....+.+.++....-+.+. .+..|| ++++. ++.||+..-.. ...++++++.-..=
T Consensus 402 ~~~~lY~tD--~~~~~I~v~~~~G~~~~~l~~~~l~~P~---~iavdp~~G~ly~tD~g~------~~~I~r~~~dG~~~ 470 (619)
T 3s94_A 402 VARNLYWTD--TGTDRIEVTRLNGTMRKILISEDLEEPR---AIVLDPMVGYMYWTDWGE------IPKIERAALDGSDR 470 (619)
T ss_dssp TTTEEEEEE--TTTTEEEEEETTSCSCEEEECTTCCSEE---EEEEETTTTEEEEEECSS------SCEEEEEETTSCSC
T ss_pred ccCcEEEEe--CCCCcEEEEeCCCCeEEEEEECCCCCee---eEEEEcCCCcEEEecCCC------CCEEEEEccCCCcc
Confidence 478999873 23467889988765433332 233332 33443 58999985211 23578887754322
Q ss_pred EeCCCCccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEE
Q 013797 262 DSLPGMRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELY 338 (436)
Q Consensus 262 ~~~~~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~ly 338 (436)
+.+.. .....+.+..+ +++||+... ....|+++|+....=+.+.... .....++++.++.||
T Consensus 471 ~~l~~--~~l~~P~GlalD~~~~~LY~aD~------~~~~I~~~~~dG~~~~~~~~~~-------l~~P~glav~~~~ly 535 (619)
T 3s94_A 471 VVLVN--TSLGWPNGLALDYDEGKIYWGDA------KTDKIEVMNTDGTGRRVLVEDK-------IPHIFGFTLLGDYVY 535 (619)
T ss_dssp EEEEC--SSCSCEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEEEECC-------CCSSCCEEEETTEEE
T ss_pred EEEEe--CCCCCCeeeEEcccCCEEEEEEC------CCCEEEEEecCCCceEEEeccC-------CCCcEEEEEECCEEE
Confidence 22211 11122333333 689999864 3457899998654333322110 112235788899999
Q ss_pred EEecCCCeEEEEECCCCcEE
Q 013797 339 SLETSSNELRVYLKDSNSWK 358 (436)
Q Consensus 339 v~gg~~~~i~~yd~~~~~W~ 358 (436)
+.....+.|++.|..+..=+
T Consensus 536 ~tD~~~~~I~~~~k~~g~~~ 555 (619)
T 3s94_A 536 WTDWQRRSIERVHKRSAERE 555 (619)
T ss_dssp EECTTSSCEEEEESSSCCEE
T ss_pred EeecCCCeEEEEEcCCCceE
Confidence 99887889999999886433
No 304
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=59.35 E-value=1.6e+02 Score=30.23 Aligned_cols=242 Identities=14% Similarity=0.133 Sum_probs=116.2
Q ss_pred CCeEEEEecCCCCeEeCCCCCCCCC-ccCCCeeeEEe---CCEEEEEceecC------CCeEEEEECCCCCEEeCCC-CC
Q 013797 151 DSSWWAFDRHFQTRRKLPELPSDPC-FKLGDKESLCA---GTHLIVSGNEIE------GGVIWRYELETNNWFKGPS-MR 219 (436)
Q Consensus 151 ~~~~~~~dp~~~~W~~l~~~~~~~~-~~~~~~~~~~~---~~~iyv~GG~~~------~~~v~~ydp~t~~W~~l~~-~p 219 (436)
...++..+-.-.+|..+.+.+.... ......+++.. .+.||+..+... ...+++-.=.-.+|+++.. .+
T Consensus 44 ~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~ 123 (737)
T 2cn3_A 44 IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFK 123 (737)
T ss_dssp SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSC
T ss_pred CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcc
Confidence 3467888888899999765332111 01111122222 357887654211 1345444434457987642 11
Q ss_pred C-----CC-cccEEEEe---CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCC--------------cceeE
Q 013797 220 R-----PR-CLFASATC---GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRR--------------KLCSG 276 (436)
Q Consensus 220 ~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r--------------~~~~~ 276 (436)
. .+ ..+.+++. .+.+|+.... +. -+++=+=.-.+|+.+..+|... .....
T Consensus 124 ~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g~------gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 196 (737)
T 2cn3_A 124 MGGNMPGRSMGERLAIDPNDNRILYLGTRC-GN------GLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVW 196 (737)
T ss_dssp CCTTSTTTTSCCCEEECSSCTTCEEEECST-TC------CEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEE
T ss_pred cCCCcCcccccceEEECCCCCCEEEEeecc-CC------cEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEE
Confidence 1 12 12344442 2567764311 11 1333222235799887655321 01122
Q ss_pred EEEC----------CEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEec---
Q 013797 277 CYMD----------NKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLET--- 342 (436)
Q Consensus 277 ~~~~----------g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg--- 342 (436)
+.++ +.||+.-.... ..++.=.-.-.+|+.+..+|. ....+.++.. ++.+|+..+
T Consensus 197 v~~dp~~~~~~~~~~~v~~~~~~~~-----~~v~~S~DgG~tW~~~~~~p~------~~~~~~~~~~~~~~l~~~~~d~~ 265 (737)
T 2cn3_A 197 VVFDKSSSTPGNPTKTIYVGVADKN-----ESIYRSTDGGVTWKAVPGQPK------GLLPHHGVLASNGMLYITYGDTC 265 (737)
T ss_dssp EEECGGGSCTTSCCSCEEEEESCSS-----CCEEEESSTTSCCEECTTCCC------SSEEEEEEECTTSEEEEEEESSC
T ss_pred EEcCCCCcccCCCCCEEEEEecCCC-----ccEEEEcCCCCceEECCCCCC------cccceEEEECCCCeEEEEecCCC
Confidence 3332 26776432111 113222222458999986652 2122222322 678888742
Q ss_pred ------CCCeEEEEECCCCcEEEcccCCCcc-CCCCCceEEEEE---eCCEEEEEcCCCCCCCCcEEEEeecCCCCCCcc
Q 013797 343 ------SSNELRVYLKDSNSWKNLGLVPVRA-DFNRGWGIAFKS---LGNELLVIGASSTSSHESMAIYTCCPSSDAGEL 412 (436)
Q Consensus 343 ------~~~~i~~yd~~~~~W~~v~~~p~~~-~~~~~~~~~~~~---~~~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~ 412 (436)
....+++++-...+|+++...|... ..+.++. .+++ ..+.||+.+..... ....+|. .+| .-.
T Consensus 266 g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~-~i~v~p~~~~~ly~~~~~~~~--~~~~l~~---S~D-gG~ 338 (737)
T 2cn3_A 266 GPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFA-GLAVDRQNPDIIMVTSMNAWW--PDEYIFR---STD-GGA 338 (737)
T ss_dssp CSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEE-EEEECTTCTTCEEEEEECCCS--SCCCEEE---ESS-TTS
T ss_pred CccccccCceEEEEeCCCCCEEEccCCCCCCcccccccc-cEEEcCCCCCEEEEEecccCC--CCccEEE---eCC-CCc
Confidence 3347999999999999998655320 1122222 1222 13678877654211 1223452 113 445
Q ss_pred CcEEe
Q 013797 413 QWRLL 417 (436)
Q Consensus 413 ~W~~l 417 (436)
+|+.+
T Consensus 339 tW~~~ 343 (737)
T 2cn3_A 339 TWKNI 343 (737)
T ss_dssp SCEES
T ss_pred cccch
Confidence 89888
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=58.73 E-value=1.2e+02 Score=28.32 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=0.0
Q ss_pred ceEEEE--eCCCCCeEeCCCC--c--cC-CcceeEEEE----CCEEEEEeccCCCCCcCCEEEEEECCCC-----cEEEc
Q 013797 249 NSAERY--NPETKSWDSLPGM--R--QR-RKLCSGCYM----DNKFYVIGGRNEKDKPLTCGEAYDEYAG-----TWYHI 312 (436)
Q Consensus 249 ~~~~~y--d~~t~~W~~~~~~--p--~~-r~~~~~~~~----~g~iyv~gG~~~~~~~~~~v~~yD~~~~-----~W~~v 312 (436)
+.+.+| |+.+++++.+... | .. +.-.+.|.+ .+++|++-...... ++.|++... +=+.+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~-----~~q~~l~~~~~g~~~~~lV 173 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGE-----FEQYELKADKNGYISGKKV 173 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSE-----EEEEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCe-----EEEEEEEeCCCCcccceEE
Q ss_pred CCCCCCCCCCCCCCCCEEEEEC--CEEEEEecCCCeEEEEECCCCc---EEEcccCCCccCCCCCceEEEEEeC---CEE
Q 013797 313 PDILKDFPAETGKSPPLIAVVN--NELYSLETSSNELRVYLKDSNS---WKNLGLVPVRADFNRGWGIAFKSLG---NEL 384 (436)
Q Consensus 313 ~~~~~~~~~~~~r~~~~~~~~~--g~lyv~gg~~~~i~~yd~~~~~---W~~v~~~p~~~~~~~~~~~~~~~~~---~~l 384 (436)
..+. .+-...++++-+ ++||+-.-..+ ||+||.+... -+.+...+.........|+++.... +.|
T Consensus 174 R~f~------lgsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 174 RAFK------MNSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEE------CSSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred EEec------CCCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Q ss_pred EEEcCCCCCCCCcEEEE
Q 013797 385 LVIGASSTSSHESMAIY 401 (436)
Q Consensus 385 ~v~GG~~~~~~~~~~~y 401 (436)
++..-.+ +.+.+|
T Consensus 247 ivSsQG~----~s~~Vy 259 (355)
T 3amr_A 247 MASSQGN----SSYAIY 259 (355)
T ss_dssp EEEEGGG----TEEEEE
T ss_pred EEEcCCC----CEEEEE
No 306
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=58.21 E-value=1.2e+02 Score=28.18 Aligned_cols=27 Identities=11% Similarity=0.181 Sum_probs=21.1
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEc
Q 013797 334 NNELYSLETSSNELRVYLKDSNSWKNL 360 (436)
Q Consensus 334 ~g~lyv~gg~~~~i~~yd~~~~~W~~v 360 (436)
++..++.|+..+.|.+||..+++-..+
T Consensus 353 ~~~~l~s~s~dg~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 353 SDSVVMTGSYNNFFRMFDRNTKRDITL 379 (447)
T ss_dssp TSSEEEEECSTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEeccCCEEEEEEcCCCcceee
Confidence 566667788888999999998776554
No 307
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=57.75 E-value=85 Score=26.39 Aligned_cols=145 Identities=14% Similarity=0.074 Sum_probs=72.1
Q ss_pred EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC--Ce-EeC----CCCccCCcceeEEE--ECCEEEEEeccCCCCCcC
Q 013797 226 ASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK--SW-DSL----PGMRQRRKLCSGCY--MDNKFYVIGGRNEKDKPL 296 (436)
Q Consensus 226 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W-~~~----~~~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~ 296 (436)
+++...+.+|++-|. .+++++...- .. ..+ +.+|. ...|++ .++++|++-|
T Consensus 10 A~~~~~g~~~fFkg~---------~~w~~~~~~~~~gyP~~I~~~w~glP~---~iDAa~~~~~g~~yfFkg-------- 69 (196)
T 3c7x_A 10 TVAMLRGEMFVFKER---------WFWRVRNNQVMDGYPMPIGQFWRGLPA---SINTAYERKDGKFVFFKG-------- 69 (196)
T ss_dssp EEEEETTEEEEEETT---------EEEEEETTEECTTCSEEHHHHSTTCCS---SCCEEEECTTSCEEEEET--------
T ss_pred EEEEcCCEEEEEECC---------EEEEEECCccCCCCceEhhHhccCCCC---CccEEEEeCCCcEEEecC--------
Confidence 445678899999653 3566643210 00 111 23333 223333 4788999976
Q ss_pred CEEEEEECCCCcE---EEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEE-----EcccCCCc
Q 013797 297 TCGEAYDEYAGTW---YHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWK-----NLGLVPVR 366 (436)
Q Consensus 297 ~~v~~yD~~~~~W---~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~-----~v~~~p~~ 366 (436)
+..++||..+... ..+.....+ .|.. ..-++... ++++|++-| +..|+||..+++-. .+...+..
T Consensus 70 ~~yw~~~~~~~~~gyPk~I~~~~~g--lP~~-~IDAA~~~~~~g~~yfFkG--~~yw~yd~~~~~v~~gyPk~i~~~~gi 144 (196)
T 3c7x_A 70 DKHWVFDEASLEPGYPKHIKELGRG--LPTD-KIDAALFWMPNGKTYFFRG--NKYYRFNEELRAVDSEYPKNIKVWEGI 144 (196)
T ss_dssp TEEEEEETTEECTTCSEEGGGTCBS--CCSS-CCSEEEEETTTTEEEEEET--TEEEEEETTTTEECTTCSEEGGGSBTC
T ss_pred CEEEEEeCCcccCCCCeEhhhcCCC--CCCC-cccEEEEEccCCEEEEEEC--CEEEEEeCCcccccCCCCccHHHCCCc
Confidence 3568888542110 112111100 1111 12233333 589999976 68999998775321 11111111
Q ss_pred cCCCCCceEEEEEeCC-EEEEEcCCCCCCCCcEEEEeecCC
Q 013797 367 ADFNRGWGIAFKSLGN-ELLVIGASSTSSHESMAIYTCCPS 406 (436)
Q Consensus 367 ~~~~~~~~~~~~~~~~-~l~v~GG~~~~~~~~~~~y~~~p~ 406 (436)
+ ....+++...++ ++|+|-|.. .|+|++.
T Consensus 145 p---~~idaAf~~~~~~~~YfFkg~~--------y~r~d~~ 174 (196)
T 3c7x_A 145 P---ESPRGSFMGSDEVFTYFYKGNK--------YWKFNNQ 174 (196)
T ss_dssp C---SSCSEEEECTTSSEEEEEETTE--------EEEEETT
T ss_pred C---CCcceeEEecCCCEEEEEECCE--------EEEEECC
Confidence 1 112244433344 999997764 5666654
No 308
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=56.42 E-value=61 Score=30.68 Aligned_cols=73 Identities=8% Similarity=-0.081 Sum_probs=42.7
Q ss_pred CCEEEEEcCcC--CCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEE-EECC--EEEEEeccCCCCCcCCEEEEEECC
Q 013797 231 GTFAFVAGGHG--MDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGC-YMDN--KFYVIGGRNEKDKPLTCGEAYDEY 305 (436)
Q Consensus 231 ~~~iyv~GG~~--~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~g--~iyv~gG~~~~~~~~~~v~~yD~~ 305 (436)
++++|+.-+.. +......+.++++|..+.+-.. ..+.+....+.+ .-++ .+|+..+ ..+.+.+||..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~------~~~~VsViD~~ 362 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALST------GDKTLYIHDAE 362 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEET------TTTEEEEEETT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcC------CCCeEEEEECC
Confidence 67899974322 1111234689999999887432 222222222222 3355 4677654 35678999999
Q ss_pred CCcEEE
Q 013797 306 AGTWYH 311 (436)
Q Consensus 306 ~~~W~~ 311 (436)
+++-..
T Consensus 363 t~k~~~ 368 (386)
T 3sjl_D 363 SGEELR 368 (386)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 887543
No 309
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=53.65 E-value=1.3e+02 Score=27.30 Aligned_cols=178 Identities=6% Similarity=-0.030 Sum_probs=82.8
Q ss_pred EeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCccc
Q 013797 146 MLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLF 225 (436)
Q Consensus 146 ~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~ 225 (436)
+...+...+..+|..+++-...-..+.+ ..++....+.+++.. ...+.+||..+.. +.+..+..+. .
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~~~~~------v~~v~~~~~~~~~~~----~~~i~i~d~~~~~-~~~~~~~~~~--~ 141 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIKVDAP------VKDLFLSREFIVVSY----GDVISVFKFGNPW-KRITDDIRFG--G 141 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEECSSC------EEEEEECSSEEEEEE----TTEEEEEESSTTC-CBSSCCEEEE--E
T ss_pred EEECCccEEEEEECCCCcEEEEEECCCc------eEEEEEcCCEEEEEE----cCEEEEEECCCCc-eeeEEeccCC--c
Confidence 3344456888899887764332111111 112333344444432 3468899987761 1122221111 1
Q ss_pred EEEEeCCEEEEE-cCcCCCCCCccceEEEEeCCCCC-eEe-------------CCCCccCCcceeEEEE--CCEEEEEec
Q 013797 226 ASATCGTFAFVA-GGHGMDGSGVLNSAERYNPETKS-WDS-------------LPGMRQRRKLCSGCYM--DNKFYVIGG 288 (436)
Q Consensus 226 ~~~~~~~~iyv~-GG~~~~~~~~~~~~~~yd~~t~~-W~~-------------~~~~p~~r~~~~~~~~--~g~iyv~gG 288 (436)
.++.....+.+. |+.+ ..+.+||..+.. +.. +..+.........+.+ ++++.+.|+
T Consensus 142 ~~~~s~~~la~~sg~~~-------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 142 VCEFSNGLLVYSNEFNL-------GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp EEEEETTEEEEEESSCT-------TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEccEEEEeCCCcC-------cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 111222444444 3332 248889987653 111 0000111111122222 677777776
Q ss_pred cCCCCCcCCE-EEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC
Q 013797 289 RNEKDKPLTC-GEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 289 ~~~~~~~~~~-v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+ .. +..||..+++-... +... ........+.. ++++++.++..+.|.+||..+.
T Consensus 215 ~d------~~~v~iwd~~~~~~~~~--~~~g----~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 QD------GTIIRVFKTEDGVLVRE--FRRG----LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TT------CSEEEEEETTTCCEEEE--EECT----TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CC------CCEEEEEECCCCcEEEE--EEcC----CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 43 33 78899887653221 1100 00011111222 5777778877889999998654
No 310
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=53.63 E-value=1.3e+02 Score=27.30 Aligned_cols=182 Identities=7% Similarity=-0.020 Sum_probs=84.9
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPG 266 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~ 266 (436)
++.+.+.|+.. ..+.+||..+++-...-..+. .-.++....+.+++.. ...+.+||..+. .+.+..
T Consensus 70 ~~~~~~~~~~d--~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~---------~~~i~i~d~~~~-~~~~~~ 135 (355)
T 3vu4_A 70 TNYVAFVTGVK--EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSY---------GDVISVFKFGNP-WKRITD 135 (355)
T ss_dssp SSEEEEECSST--TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEE---------TTEEEEEESSTT-CCBSSC
T ss_pred CCEEEEEECCc--cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEE---------cCEEEEEECCCC-ceeeEE
Confidence 45565666532 489999998886433211221 1122222344444442 135888998765 112222
Q ss_pred CccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc-EEE-------------cCCCCCCCCCCCCCCCCEEEE
Q 013797 267 MRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT-WYH-------------IPDILKDFPAETGKSPPLIAV 332 (436)
Q Consensus 267 ~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W~~-------------v~~~~~~~~~~~~r~~~~~~~ 332 (436)
+..+ ....+...+.+.+..|.. ...+..||+.++. +.. +..+. ........+.
T Consensus 136 ~~~~--~~~~~~s~~~la~~sg~~-----~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~------~h~~~v~~~~ 202 (355)
T 3vu4_A 136 DIRF--GGVCEFSNGLLVYSNEFN-----LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK------AHTNPIKMVR 202 (355)
T ss_dssp CEEE--EEEEEEETTEEEEEESSC-----TTCEEEEECCC------------------CCEEEC------CCSSCEEEEE
T ss_pred eccC--CceEEEEccEEEEeCCCc-----CcEEEEEECCCCCccccccccccccccCcccEEEE------ccCCceEEEE
Confidence 2221 111222233333331322 2357889988653 111 00111 0111111222
Q ss_pred E--CCEEEEEecCCCe-EEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEe
Q 013797 333 V--NNELYSLETSSNE-LRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYT 402 (436)
Q Consensus 333 ~--~g~lyv~gg~~~~-i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~ 402 (436)
+ +|++++.|+..+. |.+||..+.+-.. .+...........+++ ..++++++.|+.+ ..+.+|.
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~-s~~~~~l~s~s~d----~~v~iw~ 268 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTEDGVLVR--EFRRGLDRADVVDMKW-STDGSKLAVVSDK----WTLHVFE 268 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTTCCEEE--EEECTTCCSCEEEEEE-CTTSCEEEEEETT----CEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEE--EEEcCCCCCcEEEEEE-CCCCCEEEEEECC----CEEEEEE
Confidence 2 6777888887887 9999998764322 2210000111112222 3456777777766 4666774
No 311
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.92 E-value=1.8e+02 Score=28.11 Aligned_cols=176 Identities=8% Similarity=0.114 Sum_probs=84.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL 264 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 264 (436)
++..++.|+. ...+.+||.....-..+.... .....+.+ +++.++.|+.+ ..+.+||.....-..+
T Consensus 355 ~g~~l~~~~~--dg~v~~~~~~~~~~~~~~~~~---~~v~~~~~s~dg~~l~~~~~d-------~~v~~~~~~~~~~~~~ 422 (577)
T 2ymu_A 355 DGQTIASASD--DKTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDD-------KTVKLWNRNGQLLQTL 422 (577)
T ss_dssp TSSEEEEEET--TSEEEEEETTCCEEEEEECCS---SCEEEEEECTTSSCEEEEETT-------SEEEEECTTCCEEEEE
T ss_pred CCCEEEEEeC--CCEEEEEcCCCCEEEEecCCC---CCeEEEEECCCCCEEEEEeCC-------CEEEEEeCCCCEEEEe
Confidence 5555555543 346788886544333332211 11122222 45555555533 2477788543322222
Q ss_pred CCCccCCcceeEEE--ECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEE-ECCEEEEEe
Q 013797 265 PGMRQRRKLCSGCY--MDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAV-VNNELYSLE 341 (436)
Q Consensus 265 ~~~p~~r~~~~~~~--~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~-~~g~lyv~g 341 (436)
.. .......+. -++++.+.++.+ ..+..||.....-..+.... . ....++. -++++++.+
T Consensus 423 ~~---~~~~v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~~~~~~~~~~~------~--~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 423 TG---HSSSVWGVAFSPDDQTIASASDD------KTVKLWNRNGQLLQTLTGHS------S--SVRGVAFSPDGQTIASA 485 (577)
T ss_dssp EC---CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTSCEEEEEECCS------S--CEEEEEECTTSCEEEEE
T ss_pred cC---CCCCeEEEEECCCCCEEEEEcCC------CEEEEEECCCCEEEEEcCCC------C--CEEEEEEcCCCCEEEEE
Confidence 11 111111122 256666666633 45788887655444333221 0 1111222 267888888
Q ss_pred cCCCeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEE
Q 013797 342 TSSNELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIY 401 (436)
Q Consensus 342 g~~~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y 401 (436)
+..+.|.+||...+.-..+.. ....-..+++ ..++++++.|+.+ ..+.+|
T Consensus 486 ~~d~~i~iw~~~~~~~~~~~~-----h~~~v~~l~~-s~dg~~l~s~~~d----g~v~lw 535 (577)
T 2ymu_A 486 SDDKTVKLWNRNGQLLQTLTG-----HSSSVRGVAF-SPDGQTIASASDD----KTVKLW 535 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEEC-----CSSCEEEEEE-CTTSSCEEEEETT----SEEEEE
T ss_pred eCCCEEEEEcCCCCEEEEEeC-----CCCCEEEEEE-cCCCCEEEEEECc----CEEEEE
Confidence 778899999975543333211 0011111222 3456777777765 356666
No 312
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=50.11 E-value=1.3e+02 Score=30.28 Aligned_cols=107 Identities=7% Similarity=-0.217 Sum_probs=50.2
Q ss_pred CeEEEEECCCCCEEeCCCCCCC--CcccEEEE-eCCEEEEEcCcCCCC--CCccceEEEEeCCCCCeEeCCCCccCC--c
Q 013797 200 GVIWRYELETNNWFKGPSMRRP--RCLFASAT-CGTFAFVAGGHGMDG--SGVLNSAERYNPETKSWDSLPGMRQRR--K 272 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~--r~~~~~~~-~~~~iyv~GG~~~~~--~~~~~~~~~yd~~t~~W~~~~~~p~~r--~ 272 (436)
..++++|+.+++-..+-..... ......+. -+++.++++...... ......++++|..+++-+.+....... .
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL 116 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc
Confidence 3788888888764443221111 01122222 255544444322111 112367999999988766664332111 1
Q ss_pred ceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcC
Q 013797 273 LCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIP 313 (436)
Q Consensus 273 ~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~ 313 (436)
...+..-+|+..+++. ...++++|..++.-..+.
T Consensus 117 ~~~~~SPdG~~la~~~-------~~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIF-------ENNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SBCCBCSSTTCEEEEE-------TTEEEEESSSSSCCEEEE
T ss_pred cccEECCCCCEEEEEE-------CCeEEEEECCCCceEEEe
Confidence 1111112454434432 135677777666554443
No 313
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=49.39 E-value=1.5e+02 Score=26.77 Aligned_cols=123 Identities=11% Similarity=0.030 Sum_probs=64.0
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCC---c-cCCcceeEEEE--CCEEEEEeccCCCCCcCCEEEEEEC
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGM---R-QRRKLCSGCYM--DNKFYVIGGRNEKDKPLTCGEAYDE 304 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---p-~~r~~~~~~~~--~g~iyv~gG~~~~~~~~~~v~~yD~ 304 (436)
++++|+.......+ . ..++.++ +++-...+.. + ........+.+ +|+||++.-... ......+.+||+
T Consensus 27 ~g~~~v~~~~~~~~--~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~-~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP--E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ-SKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCC--S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH-HTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCC--c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC-cCCCCeEEEEEC
Confidence 67888874321111 1 3466666 4443333221 0 11122233333 589999862110 001357899999
Q ss_pred CCCcEEEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec---CCCeEEEEECCCC-cEEEc
Q 013797 305 YAGTWYHIPDILKDFPAETGKSPPLIAVV--NNELYSLET---SSNELRVYLKDSN-SWKNL 360 (436)
Q Consensus 305 ~~~~W~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg---~~~~i~~yd~~~~-~W~~v 360 (436)
.+++-...-.++..... .......+++. ++.+|+... ..+.|.+||+.++ .|+.+
T Consensus 101 ~tg~~~~~~~~~~~~~~-~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITL-SNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTTEEEEEEECCTTTSC-TTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred CCCeEEEEEECChhhcc-cccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 98874332222211100 11122445555 478999875 5678999999865 46655
No 314
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=48.26 E-value=2.5e+02 Score=28.92 Aligned_cols=146 Identities=9% Similarity=-0.009 Sum_probs=75.2
Q ss_pred CCeEEEEecCCC--Ce--EeCCCCCCCCCccCCCeeeE-EeCCEEEEEceec--CCCeEEEEECCC-CCEEe-CCCCCCC
Q 013797 151 DSSWWAFDRHFQ--TR--RKLPELPSDPCFKLGDKESL-CAGTHLIVSGNEI--EGGVIWRYELET-NNWFK-GPSMRRP 221 (436)
Q Consensus 151 ~~~~~~~dp~~~--~W--~~l~~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~--~~~~v~~ydp~t-~~W~~-l~~~p~~ 221 (436)
...++.+|..+. .+ ..+.+-... ...+.. ..++.||+..... ....++++|..+ ..|+. +-+....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~ 368 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKG-----VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED 368 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTT-----CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS
T ss_pred CceEEEEECCCCCCCceeEEeecCCCC-----ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC
Confidence 457788888764 35 444322111 111122 3378888876543 335899999876 67876 3221111
Q ss_pred CcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeC-------CCCC-eEeCCCCccCCcceeEEE-------EC-CEEE-
Q 013797 222 RCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNP-------ETKS-WDSLPGMRQRRKLCSGCY-------MD-NKFY- 284 (436)
Q Consensus 222 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~-------~t~~-W~~~~~~p~~r~~~~~~~-------~~-g~iy- 284 (436)
.........++.|++....++ ...++++|+ .++. -+.+. ++... ....+ .+ +.++
T Consensus 369 ~~l~~~~~~~~~lv~~~~~~g-----~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~--~~~~~~~~~~~~~~~~~l~~ 440 (751)
T 2xe4_A 369 VFMESIAVRSNYLVVAGRRAG-----LTRIWTMMADSQDGVFKAGTGLREVV-MEEPI--FTVHLVESQMLEYEEPTFRM 440 (751)
T ss_dssp EEEEEEEECSSEEEEEEEETT-----EEEEEEEECCTTTSCCCTTTCCEECC-CCCSS--CEEEECGGGCCCTTCSCEEE
T ss_pred cEEEEEEEECCEEEEEEEeCC-----EEEEEEEecccccccccCCccceEEC-CCCce--eEEEeccCcccCCCCCEEEE
Confidence 111223334677777654432 456888996 3444 44442 22221 11111 12 2333
Q ss_pred EEeccCCCCCcCCEEEEEECCCCcEEEcC
Q 013797 285 VIGGRNEKDKPLTCGEAYDEYAGTWYHIP 313 (436)
Q Consensus 285 v~gG~~~~~~~~~~v~~yD~~~~~W~~v~ 313 (436)
...+.. ....++.||+.+++.+.+.
T Consensus 441 ~~ss~~----~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 441 EYSSLA----TPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EEEETT----EEEEEEEECTTTCCEEEEE
T ss_pred EEeCCC----CCCEEEEEECCCCcEEEEe
Confidence 333221 3457889999888776665
No 315
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=46.40 E-value=1.7e+02 Score=27.87 Aligned_cols=123 Identities=20% Similarity=0.334 Sum_probs=71.2
Q ss_pred CCCeEe--CCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECC-----CC-cEEEcCCCCCCCCCCCCCCCCE
Q 013797 258 TKSWDS--LPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEY-----AG-TWYHIPDILKDFPAETGKSPPL 329 (436)
Q Consensus 258 t~~W~~--~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~-----~~-~W~~v~~~~~~~~~~~~r~~~~ 329 (436)
.+.|+. ++..|....-|+.+.+++.=|++|-.++.-....-...|=+. .. .=+.++.-- ...-+-++
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey-----~~~AsEPC 343 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEY-----EPDASEPC 343 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGG-----CTTEEEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhh-----ccccccch
Confidence 455753 555665556788888888888998876654222222333221 11 122333221 11223345
Q ss_pred EEEECCEEEEEe-cC----C-CeEEEEECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcC
Q 013797 330 IAVVNNELYSLE-TS----S-NELRVYLKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGA 389 (436)
Q Consensus 330 ~~~~~g~lyv~g-g~----~-~~i~~yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG 389 (436)
+-..+|.||+.- |. . ..+.+-+.....|..+. +|... ....+-++..|+.||+||.
T Consensus 344 vkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slr-fp~nv---HhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLR-FPHNV---HHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEE-CTTCC---CSSCCCEEEETTEEEEEEE
T ss_pred hhhhCCEEEEEecCcCCCCCcceeeeecccCCchhhee-ccccc---cccCCCcceeCCEEEEEec
Confidence 667899999994 21 2 35777777778899984 34321 1122334588999999974
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=45.11 E-value=1.9e+02 Score=26.78 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=76.1
Q ss_pred CCeEEEEECCC--CCEEeCCCCC-----CCCcccEEEEe---CC--EEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC-
Q 013797 199 GGVIWRYELET--NNWFKGPSMR-----RPRCLFASATC---GT--FAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP- 265 (436)
Q Consensus 199 ~~~v~~ydp~t--~~W~~l~~~p-----~~r~~~~~~~~---~~--~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~- 265 (436)
...+++||+.+ .+-+++.... ....-|.+... ++ +|||+.-.... ..-.++.+|+.++..+.+.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~---s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSS---STVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTC---CEEEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCC---CeEEEEEEECCCCEEEEEec
Confidence 35789999973 4555553221 12233455443 24 57777433211 2234556667666655442
Q ss_pred --CCccCCcceeEEEECCEEEEEecc--CC---------CCCcCCEEEEEECCCCcEEEcC-CCCCCCCCCCCCCCCEEE
Q 013797 266 --GMRQRRKLCSGCYMDNKFYVIGGR--NE---------KDKPLTCGEAYDEYAGTWYHIP-DILKDFPAETGKSPPLIA 331 (436)
Q Consensus 266 --~~p~~r~~~~~~~~~g~iyv~gG~--~~---------~~~~~~~v~~yD~~~~~W~~v~-~~~~~~~~~~~r~~~~~~ 331 (436)
..+..+.+-..+.-+|.+|+-+.. .. .+.....++.||+. +.+.+. .+. ..-+++
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~---------~pNGia 227 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFD---------FANGIN 227 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEES---------SEEEEE
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCc---------ccCcce
Confidence 223333344455668999986531 10 01124578889884 344332 221 112334
Q ss_pred EE-CC-EEEEEecCCCeEEEEECCC
Q 013797 332 VV-NN-ELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 332 ~~-~g-~lyv~gg~~~~i~~yd~~~ 354 (436)
.. ++ .||+.....+.|++||...
T Consensus 228 ~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 228 ISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ECCCCCEEEEEeCCCCeEEEEEECC
Confidence 33 34 7899987778999999864
No 317
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=44.99 E-value=1.8e+02 Score=26.29 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=51.3
Q ss_pred CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecC-----CCeEEEEECC
Q 013797 280 DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV-NNELYSLETS-----SNELRVYLKD 353 (436)
Q Consensus 280 ~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~-----~~~i~~yd~~ 353 (436)
+|++|+.......+ . ..++.+| +++-...+..... ........+++++. +|+||++... ...|++||++
T Consensus 27 ~g~~~v~~~~~~~~-~-~~l~~~~--~g~~~~~p~~~~~-~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP-E-MQVAELT--QDGLIPFPPQSGN-AIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL 101 (343)
T ss_dssp TSCEEEEECGGGCC-S-CSEEEEE--TTEEEESCCCCSS-CCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT
T ss_pred CCCEEEEeCCCCCC-c-eEEEEEC--CCCeecCCCcccC-cccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC
Confidence 68898875321111 1 4567777 4544433321100 00011122333333 4799999743 4689999999
Q ss_pred CCcEEEcccCCCcc--CCCCCceEEEEEeCCEEEEEcC
Q 013797 354 SNSWKNLGLVPVRA--DFNRGWGIAFKSLGNELLVIGA 389 (436)
Q Consensus 354 ~~~W~~v~~~p~~~--~~~~~~~~~~~~~~~~l~v~GG 389 (436)
+++-...-.++... ......++++..-++.+|+...
T Consensus 102 tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 102 NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 88733222232211 1111233443223678888743
No 318
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=44.64 E-value=2.3e+02 Score=27.46 Aligned_cols=56 Identities=16% Similarity=0.023 Sum_probs=31.5
Q ss_pred CC-EEEEEecCCCeEEEEECC-CCcEEEcccCCCccC--------CC----CCceEEEEEeCCEEEEEcC
Q 013797 334 NN-ELYSLETSSNELRVYLKD-SNSWKNLGLVPVRAD--------FN----RGWGIAFKSLGNELLVIGA 389 (436)
Q Consensus 334 ~g-~lyv~gg~~~~i~~yd~~-~~~W~~v~~~p~~~~--------~~----~~~~~~~~~~~~~l~v~GG 389 (436)
+| .||+..-..+.|.+||.. ..+.+.++.++..-. .. .-..+++..-|.+||+..+
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 44 577776557899999985 445565554433200 00 0123443344668888874
No 319
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=43.71 E-value=70 Score=32.20 Aligned_cols=203 Identities=11% Similarity=0.020 Sum_probs=106.1
Q ss_pred CeEEEeccCCCeEEEEecCCCCeEeCCCCCCCCCccCCCeeeE----EeCCEEEEEcee---------------cCCCeE
Q 013797 142 PSVFMLASGDSSWWAFDRHFQTRRKLPELPSDPCFKLGDKESL----CAGTHLIVSGNE---------------IEGGVI 202 (436)
Q Consensus 142 ~~l~~~~~~~~~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~----~~~~~iyv~GG~---------------~~~~~v 202 (436)
.++|+.......+.+.|+.+.+-.++-.+|.....+. ++ -.++++|+.+.. ...+.+
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg----~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHG----LRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEE----EEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcc----eeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 4555544456788999999987665444544322211 22 347888887532 111578
Q ss_pred EEEECCCCC--EEeC-CCCCCCCcccEEEEe-CCEEEEEcCcCCC------------------------------CCCcc
Q 013797 203 WRYELETNN--WFKG-PSMRRPRCLFASATC-GTFAFVAGGHGMD------------------------------GSGVL 248 (436)
Q Consensus 203 ~~ydp~t~~--W~~l-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~------------------------------~~~~~ 248 (436)
-+.|..|++ |+-. +.-| ....+.. +..+|+..-.... .....
T Consensus 178 tvID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 899999876 5532 1111 1111111 2333333211100 00123
Q ss_pred ceEEEEeCCCCCeEe-CCCCccCCcceeEEEE-CCE-EEEEeccCCCCCcCCEEEEEECCCCc-E---------EEcCCC
Q 013797 249 NSAERYNPETKSWDS-LPGMRQRRKLCSGCYM-DNK-FYVIGGRNEKDKPLTCGEAYDEYAGT-W---------YHIPDI 315 (436)
Q Consensus 249 ~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~g~-iyv~gG~~~~~~~~~~v~~yD~~~~~-W---------~~v~~~ 315 (436)
+.+-+.|..+.+.+. +...|.+..-|+..+- +|+ +|+.+. ..+.+.+||..+.+ + ..+..+
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~------~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK------LSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECT------TSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCC------CCCeEEEEECcccccccccccCcccceEEEc
Confidence 457788888733222 2233444444544443 555 555554 45678999988652 1 011111
Q ss_pred CCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCC--------CcEEEcccCCC
Q 013797 316 LKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDS--------NSWKNLGLVPV 365 (436)
Q Consensus 316 ~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~--------~~W~~v~~~p~ 365 (436)
+ .+ .++--+.+ +|.+|+.-.-.++|.+||.++ +.+..+..++.
T Consensus 328 ~------vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV 380 (595)
T 1fwx_A 328 E------LG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDV 380 (595)
T ss_dssp B------CC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEEC
T ss_pred C------CC-CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeec
Confidence 1 11 12222333 578898877778999999876 33666665554
No 320
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=42.90 E-value=17 Score=22.63 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=21.1
Q ss_pred CCCCCCCCCCCChHHHHHHhhccCCcc
Q 013797 83 PQDADYSFVPSLSDELEVLIVARVPRA 109 (436)
Q Consensus 83 ~~~~~~~~~~~LPddl~~~ILarLP~~ 109 (436)
++..|..-+..||.|+..++|+--...
T Consensus 13 P~~VD~eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 13 PEGVDQEVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp CTTCCGGGTTTSCHHHHHHHTTCCCSC
T ss_pred CCCCCHHHHHHCcHHHHHHHHhcchHH
Confidence 445667789999999999999866544
No 321
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=42.62 E-value=1.8e+02 Score=25.76 Aligned_cols=137 Identities=13% Similarity=0.008 Sum_probs=66.4
Q ss_pred CeEEEEecCCCCe-EeCCCCCCCCCccCCCeeeEEeCCEEEEEceec------C-CCeEEEEECCCCCEEeCCCCCCCCc
Q 013797 152 SSWWAFDRHFQTR-RKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI------E-GGVIWRYELETNNWFKGPSMRRPRC 223 (436)
Q Consensus 152 ~~~~~~dp~~~~W-~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~------~-~~~v~~ydp~t~~W~~l~~~p~~r~ 223 (436)
..++.+|..+++. ..+.. + ... ....+-++ +++.+... . ...++.+| +++++.+..- .
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~---~~~---~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~ 217 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P---RFS---SGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----V 217 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E---TTC---EEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----E
T ss_pred ceEEEEECCCCeEEeeecC-C---Ccc---cccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----c
Confidence 4678888888776 55543 2 111 11233455 55544322 1 34788899 7777766432 1
Q ss_pred ccEEEEeCCE-EEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEE
Q 013797 224 LFASATCGTF-AFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAY 302 (436)
Q Consensus 224 ~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~y 302 (436)
......-+++ |++.+............++++| +++++.+..-.........+..++ +|+.+..++ ...++ +
T Consensus 218 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~----~~~l~-~ 289 (347)
T 2gop_A 218 SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEG----SVNLY-I 289 (347)
T ss_dssp SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETT----EEEEE-E
T ss_pred ceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCC----cEEEE-E
Confidence 1122233454 5444432211111245788998 667776633211111111222255 777665443 23566 6
Q ss_pred ECCCCcEEEc
Q 013797 303 DEYAGTWYHI 312 (436)
Q Consensus 303 D~~~~~W~~v 312 (436)
+ +++...+
T Consensus 290 ~--~g~~~~~ 297 (347)
T 2gop_A 290 W--DGEIKPI 297 (347)
T ss_dssp E--SSSEEEE
T ss_pred c--CCceEEE
Confidence 6 3444443
No 322
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=40.73 E-value=34 Score=31.89 Aligned_cols=66 Identities=12% Similarity=-0.006 Sum_probs=34.8
Q ss_pred EEECCEEEEEeccCCCCCcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCC
Q 013797 277 CYMDNKFYVIGGRNEKDKPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSNELRVYLKDS 354 (436)
Q Consensus 277 ~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~~i~~yd~~~ 354 (436)
++.++.+|+.+. ...+.++|..++ .|+.-. -+ .... .++.++++|+.+...+.++++|.++
T Consensus 6 ~v~~~~v~~gs~-------dg~v~a~d~~tG~~~W~~~~-~~-------~~s~--p~~~~g~~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 6 TLPETLLFVSTL-------DGSLHAVSKRTGSIKWTLKE-DP-------VLQV--PTHVEEPAFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp --CTTEEEEEET-------TSEEEEEETTTCCEEEEEEC-CC-------SCCC--C-----CCEEECTTTCCEEEC----
T ss_pred eeeCCEEEEEcC-------CCEEEEEECCCCCEEEEecC-CC-------ceec--ceEcCCCEEEEeCCCCEEEEEECCC
Confidence 455777777542 346899998877 587543 11 1111 1345677888876678899999865
Q ss_pred C--cEEE
Q 013797 355 N--SWKN 359 (436)
Q Consensus 355 ~--~W~~ 359 (436)
+ .|+.
T Consensus 69 G~~~w~~ 75 (369)
T 2hz6_A 69 NEGLTKL 75 (369)
T ss_dssp -CCSEEC
T ss_pred Cceeeee
Confidence 4 5664
No 323
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=38.68 E-value=2.7e+02 Score=26.72 Aligned_cols=132 Identities=14% Similarity=0.032 Sum_probs=68.3
Q ss_pred EEEEeCCEEEEEcCcCCCCCCccceEEEEeCCC---------CCeEeCCCCccCCcceeEEE---ECCEEEEEeccCCCC
Q 013797 226 ASATCGTFAFVAGGHGMDGSGVLNSAERYNPET---------KSWDSLPGMRQRRKLCSGCY---MDNKFYVIGGRNEKD 293 (436)
Q Consensus 226 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t---------~~W~~~~~~p~~r~~~~~~~---~~g~iyv~gG~~~~~ 293 (436)
+++...+.+|++-|. ..|+++... ..|..+ |. ...+++ .+|++|+|-|
T Consensus 267 Ai~~~~ge~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~Wp~L---P~---~iDAa~~~~~~g~~~fFKg----- 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR---------FYMRTNPFYPEVELNFISVFWPQL---PN---GLEAAYEFADRDEVRFFKG----- 326 (450)
T ss_dssp EEEEETTEEEEEETT---------EEEECCTTSSSCEEEEGGGTCTTS---CS---SCCEEEEEGGGTEEEEEET-----
T ss_pred eEEecCCeEEEEeCC---------EEEEEcCCCCcccceehhHhccCC---CC---CeeEEEEEcCCCeEEEEeC-----
Confidence 556679999999663 245555433 234333 32 223343 2699999976
Q ss_pred CcCCEEEEEECCCCc--E-EEcC---CCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEE-----Ec
Q 013797 294 KPLTCGEAYDEYAGT--W-YHIP---DILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWK-----NL 360 (436)
Q Consensus 294 ~~~~~v~~yD~~~~~--W-~~v~---~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~-----~v 360 (436)
+.+|+|+..+-. + ..+. .+|. .+..--++... ++++|++-| +..|+||..+++-. .+
T Consensus 327 ---~~~W~~~~~~~~~gyP~~i~~~~g~P~-----~~~~IDAA~~~~~~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I 396 (450)
T 1su3_A 327 ---NKYWAVQGQNVLHGYPKDIYSSFGFPR-----TVKHIDAALSEENTGKTYFFVA--NKYWRYDEYKRSMDPGYPKMI 396 (450)
T ss_dssp ---TEEEEEETTEECTTCSEEHHHHHCCCT-----TCCCCCEEEEETTTTEEEEEET--TEEEEEETTTTEECSSCSEEH
T ss_pred ---CEEEEecCCcccCCCceeeehhhcCCC-----CCCccceEEEEcCCCeEEEEeC--CEEEEEeCCCccccCCCCcch
Confidence 346777643200 0 0111 1110 11112233333 589999976 78999998754211 12
Q ss_pred c-cCCCccCCCCCceEEEEEeCCEEEEEcCCC
Q 013797 361 G-LVPVRADFNRGWGIAFKSLGNELLVIGASS 391 (436)
Q Consensus 361 ~-~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~ 391 (436)
. ..|..+ ....+++ ..++++|+|-|..
T Consensus 397 ~~~fpgip---~~iDAA~-~~~g~~YFFkg~~ 424 (450)
T 1su3_A 397 AHDFPGIG---HKVDAVF-MKDGFFYFFHGTR 424 (450)
T ss_dssp HHHSTTSC---SCCSEEE-EETTEEEEEETTE
T ss_pred hhcCCCCC---CCccEEE-EcCCeEEEEeCCE
Confidence 1 112111 1122343 4689999997765
No 324
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=38.49 E-value=2.9e+02 Score=26.95 Aligned_cols=107 Identities=11% Similarity=-0.002 Sum_probs=61.7
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCc-ceeEEEE---------CC-EEEEEeccCCCCCcCCEE
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRK-LCSGCYM---------DN-KFYVIGGRNEKDKPLTCG 299 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~---------~g-~iyv~gG~~~~~~~~~~v 299 (436)
++.||++-.. ...+.++|++++.-+.+........ .+....+ ++ .||+..-..+.......+
T Consensus 151 ~~~Lyv~~~~-------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYDG-------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEEEEEEET-------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred CCEEEEEECC-------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 3678888542 2358899999988887644332111 2223333 44 488875432110123457
Q ss_pred EEEECCC-CcEE------EcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECC
Q 013797 300 EAYDEYA-GTWY------HIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKD 353 (436)
Q Consensus 300 ~~yD~~~-~~W~------~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~ 353 (436)
..++... +.|. .++.. ...+++++. ++.||+.....+.|++||++
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~---------~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAY---------KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEE---------SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEecCCCCceeecccceeeccC---------CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 7887654 3552 23211 122344444 47899998777889999997
No 325
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=36.59 E-value=2.6e+02 Score=25.92 Aligned_cols=102 Identities=13% Similarity=0.103 Sum_probs=58.4
Q ss_pred CCEEEEEceecCCCeEEEEECCCCC--E-EeCCCC--CCC-CcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCC
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNN--W-FKGPSM--RRP-RCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPET 258 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~--W-~~l~~~--p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t 258 (436)
++.+|+|-| +.+|+|+..+.. + +.+..+ |.. ..--++... ++++|++-|. ..++||..+
T Consensus 236 ~g~~~fFkg----~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~---------~yw~yd~~~ 302 (365)
T 3ba0_A 236 RNQVFLFKD----DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN---------QYWRYDERR 302 (365)
T ss_dssp GTEEEEEET----TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT---------EEEEEETTT
T ss_pred CCEEEEEeC----CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC---------EEEEEeCCc
Confidence 789999855 468898764321 1 123222 221 122233333 5799999652 478999876
Q ss_pred CCeEeC---------CCCccCCcceeEEEE-CCEEEEEeccCCCCCcCCEEEEEECCCCcEEE
Q 013797 259 KSWDSL---------PGMRQRRKLCSGCYM-DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYH 311 (436)
Q Consensus 259 ~~W~~~---------~~~p~~r~~~~~~~~-~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~ 311 (436)
++-..- +.+|. .--++... ++++|.+-| +..+.||..+.+-..
T Consensus 303 ~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg--------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 303 QMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQG--------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEET--------TEEEEEETTTTEEEE
T ss_pred ceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeC--------CEEEEEECCccEEec
Confidence 542211 11121 12234445 899999976 357899988776544
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=35.82 E-value=31 Score=32.08 Aligned_cols=110 Identities=15% Similarity=0.079 Sum_probs=52.6
Q ss_pred eCCEEEEEceecCCCeEEEEECCCCC--EEeCCC----CCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCC
Q 013797 186 AGTHLIVSGNEIEGGVIWRYELETNN--WFKGPS----MRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETK 259 (436)
Q Consensus 186 ~~~~iyv~GG~~~~~~v~~ydp~t~~--W~~l~~----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 259 (436)
.++.+|+.. ....++.+|..+++ |+.-.. +...+.. ....++.+|++.... .-.++.||..++
T Consensus 9 ~~~~V~v~t---~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~--~~~~~~~~~vv~p~~------dG~l~a~~~~~G 77 (339)
T 2be1_A 9 LSDILIAAD---VEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEP--SRLETYETLIIEPFG------DGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEEEE---TTSCEEEEETTTTEEEEEECGGGSCCSEECCCS--CTTTSSEEEEECCST------TTEEEEEETTTE
T ss_pred eCCEEEEEe---CCCeEEEEECCCCcEEEEecCCccCCcEEecCC--ccccCCcEEEEEECC------CCEEEEEECCCC
Confidence 345555542 23457777777765 764322 1111100 001355677664321 124788898877
Q ss_pred CeEeCCCCccC------CcceeEEE-------ECCEEEEEeccCCCCCcCCEEEEEECCCCc--EEEcC
Q 013797 260 SWDSLPGMRQR------RKLCSGCY-------MDNKFYVIGGRNEKDKPLTCGEAYDEYAGT--WYHIP 313 (436)
Q Consensus 260 ~W~~~~~~p~~------r~~~~~~~-------~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~--W~~v~ 313 (436)
.|+---.++.. +.....++ .++.+|+ |+ ....++++|..+++ |+.-.
T Consensus 78 ~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~-Gs------~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 78 LQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYT-GS------MRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEEEEEEHHHHHTTCSEEEECC----------CCEEEEE-CE------EEEEEEEEETTTCCEEEEEST
T ss_pred cEEeeeccccceeccccccCCCceeecccccccCCEEEE-Ee------cCCEEEEEECCCCcEEEEEec
Confidence 65421111111 11111122 4555555 33 33467889988874 76543
No 327
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=34.78 E-value=2.6e+02 Score=25.71 Aligned_cols=21 Identities=10% Similarity=0.227 Sum_probs=17.6
Q ss_pred EEEEEecCCCeEEEEECCCCc
Q 013797 336 ELYSLETSSNELRVYLKDSNS 356 (436)
Q Consensus 336 ~lyv~gg~~~~i~~yd~~~~~ 356 (436)
.+++.|+..+.|.+||..+..
T Consensus 240 ~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 240 NTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp TEEEEEETTSCEEEEETTTCS
T ss_pred cEEEEEeCCCeEEEEECcCCc
Confidence 778888888899999998765
No 328
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=34.44 E-value=1.8e+02 Score=27.37 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=48.1
Q ss_pred CCEEEEEe-ccCCC-----C---CcCCEEEEEECCCC--cEEEcCCCCCCCCCCCCCCCCEEEEE---------CCEEEE
Q 013797 280 DNKFYVIG-GRNEK-----D---KPLTCGEAYDEYAG--TWYHIPDILKDFPAETGKSPPLIAVV---------NNELYS 339 (436)
Q Consensus 280 ~g~iyv~g-G~~~~-----~---~~~~~v~~yD~~~~--~W~~v~~~~~~~~~~~~r~~~~~~~~---------~g~lyv 339 (436)
.|+|+|+. |.-.. . .....+.+||+.++ +=...-.+|.+...+. .....+++. ++.+|+
T Consensus 97 ~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~-S~l~di~VD~~~~~~~c~~~~aYI 175 (381)
T 3q6k_A 97 CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKP-TYFGGFAVDVANPKGDCSETFVYI 175 (381)
T ss_dssp TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCG-GGEEEEEEEESCTTTTSCSEEEEE
T ss_pred CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccC-CccceEEEecccCCCCCCccEEEE
Confidence 57888884 32111 1 23558999999999 6544334442221111 112223333 357898
Q ss_pred EecCCCeEEEEECCCC-cEEEcc
Q 013797 340 LETSSNELRVYLKDSN-SWKNLG 361 (436)
Q Consensus 340 ~gg~~~~i~~yd~~~~-~W~~v~ 361 (436)
.......|.+||.+++ .|+...
T Consensus 176 tD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 176 TNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC
T ss_pred EcCCCCcEEEEECCCCcEEEEcc
Confidence 8866789999999875 688763
No 329
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=33.40 E-value=1.8e+02 Score=27.06 Aligned_cols=66 Identities=5% Similarity=-0.151 Sum_probs=37.9
Q ss_pred CeEEEeccCCC----eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEcee-------cCCCeEEEEECCCC
Q 013797 142 PSVFMLASGDS----SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNE-------IEGGVIWRYELETN 210 (436)
Q Consensus 142 ~~l~~~~~~~~----~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~-------~~~~~v~~ydp~t~ 210 (436)
..+|+...+.+ .+..+|+.+.+=... ++.....+. ....-+..+||.... ...+.+.++|+.|+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~--i~vG~~P~i---~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGH--SLGAFLSLA---VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEE--EEECTTCEE---EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEE--EeCCCCCce---EECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 45666555444 788999887654332 222221111 122236688887521 12368999999998
Q ss_pred CE
Q 013797 211 NW 212 (436)
Q Consensus 211 ~W 212 (436)
+=
T Consensus 107 ~v 108 (368)
T 1mda_H 107 LP 108 (368)
T ss_dssp CE
T ss_pred CE
Confidence 73
No 330
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.48 E-value=4.3e+02 Score=27.09 Aligned_cols=151 Identities=7% Similarity=-0.069 Sum_probs=80.6
Q ss_pred CCCeEEEEECCC--CCEEeCCCCCCCCcccEEEEeCCEEEEEcCcCCCC---CCccceEEEEeCCC--------CCeEe-
Q 013797 198 EGGVIWRYELET--NNWFKGPSMRRPRCLFASATCGTFAFVAGGHGMDG---SGVLNSAERYNPET--------KSWDS- 263 (436)
Q Consensus 198 ~~~~v~~ydp~t--~~W~~l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~~yd~~t--------~~W~~- 263 (436)
..+.++..+... .+|.++ . .|+........++++|+....+... ......+.+.|..+ ..|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (711)
T 4hvt_A 267 YNYDNYILDTKYKNLKLQKI-N--MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKIL 343 (711)
T ss_dssp SCEEEEEEECSSSSCEEEEC-C--SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEE
T ss_pred CceeEEEEcCCCCCCcceEe-e--cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEE
Confidence 346778877653 668887 2 2332222456689999976443100 00233577788654 46886
Q ss_pred CCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEc--CCCCCCCCCCCCCCCCEEEEE---CCEEE
Q 013797 264 LPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHI--PDILKDFPAETGKSPPLIAVV---NNELY 338 (436)
Q Consensus 264 ~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v--~~~~~~~~~~~~r~~~~~~~~---~g~ly 338 (436)
+.+-. .+.-......++.+++..-.+ ....+.++|+.++.|... ..+|. . ........ ++.++
T Consensus 344 ~~~~~-~~~l~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~g~~~~~~~i~lp~------~-~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 344 FTPTA-NEVFNFISTTKDRVFLATYDN----VVAKVVTFTLENEQWTKPVVLKLPY------Q-NAIFGMSSYEEEEEAL 411 (711)
T ss_dssp ECCCT-TEEEEEEEECSSCEEEEEEET----TEEEEEEECEETTEECCCEEECCCS------T-TCEEEEECCTTCSCEE
T ss_pred ECCCC-CCeEEEEEEECCEEEEEEEEC----CEEEEEEEECCCCceEEEeccCCCC------C-eEEEEEeecCcCCEEE
Confidence 43322 222223445567777664332 234678899888877432 12331 0 01111111 23454
Q ss_pred EEe-c--CCCeEEEEECCCCcEEEcccCC
Q 013797 339 SLE-T--SSNELRVYLKDSNSWKNLGLVP 364 (436)
Q Consensus 339 v~g-g--~~~~i~~yd~~~~~W~~v~~~p 364 (436)
+.. + ....++.||.. ++++.+...+
T Consensus 412 ~~~ss~~~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 412 ITIENSIVPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp EEEECSSSCCEEEEECTT-SCEEEEECCS
T ss_pred EEEecCCCCCEEEEEeCC-CcEEEEecCC
Confidence 443 2 25689999988 7777775443
No 331
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=32.44 E-value=1.4e+02 Score=30.08 Aligned_cols=157 Identities=11% Similarity=0.094 Sum_probs=85.2
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe----CCEEEEEcCcCC----CC------CCccceEE
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC----GTFAFVAGGHGM----DG------SGVLNSAE 252 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~----~~~iyv~GG~~~----~~------~~~~~~~~ 252 (436)
|.++||. ......+.+.|+.+.+-.++-.+|.....|.++.. ++++|+.+.+.. ++ ..+.+.+-
T Consensus 101 G~~lfVn--d~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 101 GRFLFMN--DKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEE--ETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCEEEEE--cCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 5667774 34457899999999986664456655556666642 578888864321 11 11345678
Q ss_pred EEeCCCCC--eEeC-CCCccCCcceeEEEE-CCEEEEEeccC-------------------------------CCCCcCC
Q 013797 253 RYNPETKS--WDSL-PGMRQRRKLCSGCYM-DNKFYVIGGRN-------------------------------EKDKPLT 297 (436)
Q Consensus 253 ~yd~~t~~--W~~~-~~~p~~r~~~~~~~~-~g~iyv~gG~~-------------------------------~~~~~~~ 297 (436)
+.|.++.+ |+.. +.-|.. ..+.- +..+|+..... +.....+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~----~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDN----CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCC----EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEEEEEEeCCCccc----eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 89998765 5432 221111 11111 22223322111 1111234
Q ss_pred EEEEEECCCCcEEE-cCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCC
Q 013797 298 CGEAYDEYAGTWYH-IPDILKDFPAETGKSPPLIAVV-NN-ELYSLETSSNELRVYLKDSN 355 (436)
Q Consensus 298 ~v~~yD~~~~~W~~-v~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~~~~i~~yd~~~~ 355 (436)
.+-+.|..+.+... +..+| .+...|++.+. || .+|+.+...+.+.+||.++.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ip------vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIP------IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEE------EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cEEEEeCcccCCceeEEEEe------cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 57788888733222 11222 23334445444 45 57777777889999999864
No 332
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=30.63 E-value=2.5e+02 Score=23.86 Aligned_cols=99 Identities=8% Similarity=0.003 Sum_probs=49.5
Q ss_pred eEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc-E--EEcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEE
Q 013797 275 SGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT-W--YHIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRV 349 (436)
Q Consensus 275 ~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~-W--~~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~ 349 (436)
+++..+|++|++-|. .++.++..... . ..+...... .+..--++... ++++|++-| +..|+
T Consensus 35 Ai~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~----lp~~IDAA~~~~~~~k~yfFkG--~~yW~ 100 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPE----LPEKIDAVYEAPQEEKAVFFAG--NEYWI 100 (218)
T ss_dssp EEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTT----SCSCCSEEEEETTTTEEEEEET--TEEEE
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCC----CCCCccEEEEECCCCEEEEEeC--CEEEE
Confidence 445679999999762 34555544321 1 112221111 11122233333 589999976 78999
Q ss_pred EECCCCcEEEcccCCCccC----C--CCCceEEEE-EeCCEEEEEcCCC
Q 013797 350 YLKDSNSWKNLGLVPVRAD----F--NRGWGIAFK-SLGNELLVIGASS 391 (436)
Q Consensus 350 yd~~~~~W~~v~~~p~~~~----~--~~~~~~~~~-~~~~~l~v~GG~~ 391 (436)
||.. +.....|.... + .....+|+. ..++++|+|-|..
T Consensus 101 y~~~----~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~~ 145 (218)
T 1gen_A 101 YSAS----TLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDK 145 (218)
T ss_dssp EETT----EECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETTE
T ss_pred EcCc----cccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECCE
Confidence 9853 12221121110 0 011234443 2468999997764
No 333
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=30.47 E-value=4.8e+02 Score=28.37 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=67.7
Q ss_pred ccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCe-EeCC----CCccCCcceeEEEE---CCEEEEEeccCCCCCc
Q 013797 224 LFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSW-DSLP----GMRQRRKLCSGCYM---DNKFYVIGGRNEKDKP 295 (436)
Q Consensus 224 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~----~~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~ 295 (436)
++++....+.+ ++|.-.... ..-.++.|+.....| .... .+...-.+.++++. ++..+++|.-. .. .
T Consensus 336 GfSa~~t~d~~-~~GapG~~~--w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~-~ 410 (1095)
T 3k6s_A 336 GFSAVFTPDGP-VLGAVGSFT--WSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQ-H 410 (1095)
T ss_dssp TSSEECCTTCC-EEEESCSTT--TTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GG-G
T ss_pred cccceecCCcc-eEcccccCC--ccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-cc-c
Confidence 34444443434 566443322 334577787765443 2221 11222223344331 23356666322 11 3
Q ss_pred CCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEEC------CEEEEEecC-------CCeEEEEECCC--CcEEEc
Q 013797 296 LTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVN------NELYSLETS-------SNELRVYLKDS--NSWKNL 360 (436)
Q Consensus 296 ~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~------g~lyv~gg~-------~~~i~~yd~~~--~~W~~v 360 (436)
...+++|....+.|.....+... ......+.++++.| ..|+++|.. .+.+++|.... ..|...
T Consensus 411 ~G~V~i~~~~~~~~~~~~~~~g~--~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~ 488 (1095)
T 3k6s_A 411 TGKAVIFTQVSRQWRMKAEVTGT--QIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCD 488 (1095)
T ss_dssp TCEEEEEECCTTTCCEEEEECCS--STTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSC
T ss_pred cceEEEEEecCCcceEEeecccC--cccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeee
Confidence 56789999888888776543321 11345667777643 257777742 35789986543 458754
Q ss_pred ccC
Q 013797 361 GLV 363 (436)
Q Consensus 361 ~~~ 363 (436)
..+
T Consensus 489 ~~l 491 (1095)
T 3k6s_A 489 AVL 491 (1095)
T ss_dssp SSC
T ss_pred EEe
Confidence 433
No 334
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=30.35 E-value=5e+02 Score=27.26 Aligned_cols=148 Identities=9% Similarity=0.009 Sum_probs=0.0
Q ss_pred CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCCCCccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEE
Q 013797 231 GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLPGMRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWY 310 (436)
Q Consensus 231 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~ 310 (436)
++.+++.|+.++ .+.+||..+..-... ++....-.+.++..|++.+.++ .-..+.++|+.+++-.
T Consensus 28 dg~~lAsgs~Dg-------~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s------~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 28 TQNLLAIATVTG-------EVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVIN------AKDTVYVLSLYSQKVL 92 (902)
T ss_dssp TTTEEEEEETTS-------EEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEE------TTCEEEEEETTTCSEE
T ss_pred CCCEEEEEeCCC-------EEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEE------CcCeEEEEECCCCcEE
Q ss_pred EcCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEccc-------CCCccCCCCCceEEEEEeC
Q 013797 311 HIPDILKDFPAETGKSPPLIAVV--NNELYSLETSSNELRVYLKDSNSWKNLGL-------VPVRADFNRGWGIAFKSLG 381 (436)
Q Consensus 311 ~v~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~~~~i~~yd~~~~~W~~v~~-------~p~~~~~~~~~~~~~~~~~ 381 (436)
..-... .....+.+ ++..++.|...+.|.+||.++..-..... ............+++...+
T Consensus 93 ~~~~~~---------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 93 TTVFVP---------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp EEEECS---------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred EEEcCC---------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Q ss_pred CEEEEEcCCCCCCCCcEEEEeecCCCCCCccC
Q 013797 382 NELLVIGASSTSSHESMAIYTCCPSSDAGELQ 413 (436)
Q Consensus 382 ~~l~v~GG~~~~~~~~~~~y~~~p~~d~~~~~ 413 (436)
+.++++|+.+ ..+ +| |..+.+
T Consensus 164 ~~~l~~g~~d----g~v-lW------d~~~~~ 184 (902)
T 2oaj_A 164 IGTVLISYEY----VTL-TY------SLVENE 184 (902)
T ss_dssp EEEEEEECSS----CEE-EE------ETTTTE
T ss_pred CCEEEEEeCC----CcE-EE------ECCCCc
No 335
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=28.83 E-value=3.7e+02 Score=25.23 Aligned_cols=159 Identities=8% Similarity=0.055 Sum_probs=71.5
Q ss_pred CEEEEEceecCCCeEEEEECCCCCEEeCCCCCCCCcccEEEEe--CCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeCC
Q 013797 188 THLIVSGNEIEGGVIWRYELETNNWFKGPSMRRPRCLFASATC--GTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSLP 265 (436)
Q Consensus 188 ~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 265 (436)
+.+++.|+. ...+.+||..+++-.. .... ......++.+ +++.++.|+.++ .+.+||+....-..+.
T Consensus 162 ~~~las~s~--Dg~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~dg-------~v~iwd~~~~~~~~~~ 230 (434)
T 2oit_A 162 PSMVAVCLA--DGSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQNG-------TVVQYLPTLQEKKVIP 230 (434)
T ss_dssp TTEEEEEET--TSCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETTS-------CEEEECTTCCEEEEEC
T ss_pred CCEEEEEEC--CCeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCCC-------cEEEEccCCccccccc
Confidence 456665553 3568889988773211 0111 1112222222 566666666432 4888998732222332
Q ss_pred CCccCC-----cceeEEEECCEEEEEecc--CCCCCcCCEEEEEECCCC------cEEEcCCCCCCCCCCCCCCCCEE-E
Q 013797 266 GMRQRR-----KLCSGCYMDNKFYVIGGR--NEKDKPLTCGEAYDEYAG------TWYHIPDILKDFPAETGKSPPLI-A 331 (436)
Q Consensus 266 ~~p~~r-----~~~~~~~~~g~iyv~gG~--~~~~~~~~~v~~yD~~~~------~W~~v~~~~~~~~~~~~r~~~~~-~ 331 (436)
...... .-.+.....+..|+++-. ++.......+..||+.+. .|.....+..... ..|..+.. .
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~~ 308 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSC--TERQHHYYLS 308 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCC--SSSCCCEEEE
T ss_pred CCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCC--CCcCcceeee
Confidence 211111 111222233334443221 221123456788887643 5666655432111 22322222 2
Q ss_pred EE-C-CEEEEEecCCCeEEEEECCC--CcEEE
Q 013797 332 VV-N-NELYSLETSSNELRVYLKDS--NSWKN 359 (436)
Q Consensus 332 ~~-~-g~lyv~gg~~~~i~~yd~~~--~~W~~ 359 (436)
.+ + +.+|+..+...+|.++.... ..|+.
T Consensus 309 ~l~dw~l~~v~s~~s~dv~vl~~~~~~~~~~~ 340 (434)
T 2oit_A 309 YIEEWDLVLAASAASTEVSILARQSDQINWES 340 (434)
T ss_dssp EEGGGTEEEEEETTCSBCEEEEECTTSSCEEE
T ss_pred hhccCCEEEEecCCCCceeEEEecCCCCccEE
Confidence 22 2 45555555566666665433 25744
No 336
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.83 E-value=5.1e+02 Score=26.51 Aligned_cols=146 Identities=11% Similarity=0.049 Sum_probs=78.1
Q ss_pred CeEEEEecCC--CCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceec--------CCCeEEEEECCC--------CCEE
Q 013797 152 SSWWAFDRHF--QTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEI--------EGGVIWRYELET--------NNWF 213 (436)
Q Consensus 152 ~~~~~~dp~~--~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--------~~~~v~~ydp~t--------~~W~ 213 (436)
+.++..|... ..|.++ .+|.. .. .+...++.+|+..... ....+...+..+ ..|+
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMPSD--AT----LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSCTT--CE----EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCE
T ss_pred eeEEEEcCCCCCCcceEe-ecCCc--ce----EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccce
Confidence 4566666543 567776 23322 11 1346688999865321 345788888754 4688
Q ss_pred e-CCCCCCCCcccEEEEeCCEEEEEcCcCCCCCCccceEEEEeCCCCCeEeC--CCCccCCcceeEEE--E-CCEEEE-E
Q 013797 214 K-GPSMRRPRCLFASATCGTFAFVAGGHGMDGSGVLNSAERYNPETKSWDSL--PGMRQRRKLCSGCY--M-DNKFYV-I 286 (436)
Q Consensus 214 ~-l~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~--~-~g~iyv-~ 286 (436)
. +++-. .+.--.....++.+++..-.+ ....+.++|+.++.|... -.+|.. ....... . ++.+++ .
T Consensus 342 ~~~~~~~-~~~l~~~~~~~~~l~~~~~~~-----~~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~ 414 (711)
T 4hvt_A 342 ILFTPTA-NEVFNFISTTKDRVFLATYDN-----VVAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITI 414 (711)
T ss_dssp EEECCCT-TEEEEEEEECSSCEEEEEEET-----TEEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEE
T ss_pred EEECCCC-CCeEEEEEEECCEEEEEEEEC-----CEEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEE
Confidence 6 43322 222223344567777664333 234688899888877432 123321 1111111 1 233433 3
Q ss_pred eccCCCCCcCCEEEEEECCCCcEEEcCCCC
Q 013797 287 GGRNEKDKPLTCGEAYDEYAGTWYHIPDIL 316 (436)
Q Consensus 287 gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~ 316 (436)
.+.. ....++.||+. ++++.+...+
T Consensus 415 ss~~----~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 415 ENSI----VPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp ECSS----SCCEEEEECTT-SCEEEEECCS
T ss_pred ecCC----CCCEEEEEeCC-CcEEEEecCC
Confidence 3332 35678999988 7777765443
No 337
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.76 E-value=5.3e+02 Score=26.34 Aligned_cols=101 Identities=15% Similarity=0.214 Sum_probs=57.5
Q ss_pred CCCeEeCCCCccCCcceeEEEE-CCEEEEEeccCC--CC-CcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEE
Q 013797 258 TKSWDSLPGMRQRRKLCSGCYM-DNKFYVIGGRNE--KD-KPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVV 333 (436)
Q Consensus 258 t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~gG~~~--~~-~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~ 333 (436)
-.+|+.+..+|.....+.+++. ++.+|+..+-.. .. .....+++++-...+|+.+.+.+... ...+++...+.+
T Consensus 231 G~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~--~~~~~~~~~i~v 308 (737)
T 2cn3_A 231 GVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSS--SDNRFCFAGLAV 308 (737)
T ss_dssp TSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTS--TTCCSEEEEEEE
T ss_pred CCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCC--cccccccccEEE
Confidence 4579999876654433334333 788998754211 00 12346889999999999998765320 011222222333
Q ss_pred ----CCEEEEEecC----CCeEEEEECCCCcEEEc
Q 013797 334 ----NNELYSLETS----SNELRVYLKDSNSWKNL 360 (436)
Q Consensus 334 ----~g~lyv~gg~----~~~i~~yd~~~~~W~~v 360 (436)
.+.||+.+.. ...+++=.=..++|+.+
T Consensus 309 ~p~~~~~ly~~~~~~~~~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 309 DRQNPDIIMVTSMNAWWPDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp CTTCTTCEEEEEECCCSSCCCEEEESSTTSSCEES
T ss_pred cCCCCCEEEEEecccCCCCccEEEeCCCCccccch
Confidence 2578887642 12344443445689888
No 338
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=25.98 E-value=5.6e+02 Score=26.43 Aligned_cols=225 Identities=12% Similarity=0.061 Sum_probs=0.0
Q ss_pred CeEeCCCCCCCCCccCCCeeeEEeCCEEEEEceecCCCeEEEEECCCCCEEeCCCCC-----CCCcccEEEEeC---CEE
Q 013797 163 TRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNEIEGGVIWRYELETNNWFKGPSMR-----RPRCLFASATCG---TFA 234 (436)
Q Consensus 163 ~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~~~p-----~~r~~~~~~~~~---~~i 234 (436)
+|..+.+....+..... +...+..++.+|+.... +++-+-.-.+|+.+...+ ..+..+++++.. +.+
T Consensus 5 ~W~~~~~~~~g~i~~i~---~~p~~~~~~~a~~~~gg--v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i 79 (789)
T 1sqj_A 5 EFKNVAIGGGGYITGIV---AHPKTKDLLYARTDIGG--AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRL 79 (789)
T ss_dssp EEEECCCCBCSCEEEEE---ECSSSTTCEEEEESSSC--EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEE
T ss_pred cceEccCCCCCcEEEEE---ECCCCCCEEEEEecCCC--EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEE
Q ss_pred EEEcCcCC----CCCCccceEEEEeCCCCCeEeCCC-------CccCCcceeEEEE---CCEEEEEeccCCCCCcCCEEE
Q 013797 235 FVAGGHGM----DGSGVLNSAERYNPETKSWDSLPG-------MRQRRKLCSGCYM---DNKFYVIGGRNEKDKPLTCGE 300 (436)
Q Consensus 235 yv~GG~~~----~~~~~~~~~~~yd~~t~~W~~~~~-------~p~~r~~~~~~~~---~g~iyv~gG~~~~~~~~~~v~ 300 (436)
|+..|... .. +++=+=.-.+|+.+.. ++........++. .+.+|+.. ....++
T Consensus 80 ~~~~g~~~~~~~~~------v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-------~~~gl~ 146 (789)
T 1sqj_A 80 YLAQGRYVGDEWAA------FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-------RTEGIW 146 (789)
T ss_dssp EEEECSCTTSSCCE------EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-------SSSCEE
T ss_pred EEEeCccCCCcccE------EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-------ccCCEE
Q ss_pred EEECCCCcEEEcCCCC---CCCCCCCCCCCCEEEEEC----CEEEEEecCCCeEEEEECCCCcEEEcccCCCcc------
Q 013797 301 AYDEYAGTWYHIPDIL---KDFPAETGKSPPLIAVVN----NELYSLETSSNELRVYLKDSNSWKNLGLVPVRA------ 367 (436)
Q Consensus 301 ~yD~~~~~W~~v~~~~---~~~~~~~~r~~~~~~~~~----g~lyv~gg~~~~i~~yd~~~~~W~~v~~~p~~~------ 367 (436)
.=+-.-.+|+.+..++ . .. .+...+.++ +.||+.......+++=.-.-++|+.+..++...
T Consensus 147 ~S~DgG~TW~~~~~~~~~~~-----~~-~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~ 220 (789)
T 1sqj_A 147 KSSDRAKTWTNVTSIPDAFT-----NG-IGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPSSWLNRTTG 220 (789)
T ss_dssp EESSTTSSCEEETTSCCCCS-----TT-TCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTCCCSCCHHHHH
T ss_pred EECCCCcccCCCccCccccC-----CC-CCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcCcccccccc
Q ss_pred -------CCCCCceEEEEEeCCEEEEE--------cCCCCCCCCcEEEEeecCCCCCCccCcEEeecCC
Q 013797 368 -------DFNRGWGIAFKSLGNELLVI--------GASSTSSHESMAIYTCCPSSDAGELQWRLLECGK 421 (436)
Q Consensus 368 -------~~~~~~~~~~~~~~~~l~v~--------GG~~~~~~~~~~~y~~~p~~d~~~~~W~~l~~~~ 421 (436)
.+...+.+++....+.||+. +|.. ..+... +....+|+++...+
T Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~----g~l~~S------~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 221 AFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTF----GEVWRQ------NRTSGAWDDITPRV 279 (789)
T ss_dssp TSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCC----CCEEEE------ETTTCCEEECCCCT
T ss_pred ccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCC----ceEEEE------eCCCCceEECcCCC
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.65 E-value=33 Score=31.88 Aligned_cols=103 Identities=9% Similarity=-0.062 Sum_probs=46.8
Q ss_pred eEEEEeCCCCC--eEeCCC----CccCCcceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCC
Q 013797 250 SAERYNPETKS--WDSLPG----MRQRRKLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAET 323 (436)
Q Consensus 250 ~~~~yd~~t~~--W~~~~~----~p~~r~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~ 323 (436)
.++.+|..+++ |+.-.. +-..+.... ..++.+|++... ....++.||..++.|.--..++.......
T Consensus 21 ~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~--~~~~~~~vv~p~-----~dG~l~a~~~~~G~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 21 GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR--LETYETLIIEPF-----GDGNIYYFNAHQGLQKLPLSIRQLVSTSP 93 (339)
T ss_dssp CEEEEETTTTEEEEEECGGGSCCSEECCCSCT--TTSSEEEEECCS-----TTTEEEEEETTTEEEEEEEEHHHHHTTCS
T ss_pred eEEEEECCCCcEEEEecCCccCCcEEecCCcc--ccCCcEEEEEEC-----CCCEEEEEECCCCcEEeeeccccceeccc
Confidence 37778877764 875322 111111111 135567766421 12357888888776543112211000000
Q ss_pred CCCCCEEEE------ECCEEEEEecCCCeEEEEECCCCc--EEE
Q 013797 324 GKSPPLIAV------VNNELYSLETSSNELRVYLKDSNS--WKN 359 (436)
Q Consensus 324 ~r~~~~~~~------~~g~lyv~gg~~~~i~~yd~~~~~--W~~ 359 (436)
.+.....++ ..+...++|...+.++..|..+++ |+.
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 010000112 134444445556778888888764 654
No 340
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=24.22 E-value=4.2e+02 Score=24.30 Aligned_cols=108 Identities=8% Similarity=-0.017 Sum_probs=55.3
Q ss_pred CeEEEecc-CCC---eEEEEecCCCCeEeCCCCCCCCCccCCCeeeEEeCCEEEEEcee-------cCCCeEEEEECCCC
Q 013797 142 PSVFMLAS-GDS---SWWAFDRHFQTRRKLPELPSDPCFKLGDKESLCAGTHLIVSGNE-------IEGGVIWRYELETN 210 (436)
Q Consensus 142 ~~l~~~~~-~~~---~~~~~dp~~~~W~~l~~~~~~~~~~~~~~~~~~~~~~iyv~GG~-------~~~~~v~~ydp~t~ 210 (436)
.++|+... +.. .+..||+.+.+-. ..++...... .....-+..+|+..-. ...+.+.+||+.+.
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~~g~~p~---i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVNGGFLPN---PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEE--EEecCCCCCC---eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 44555543 222 6789999877643 2333322211 1222346688887421 12357889999887
Q ss_pred CEEeCCCCC-CCC-----cccEEEE--eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe
Q 013797 211 NWFKGPSMR-RPR-----CLFASAT--CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW 261 (436)
Q Consensus 211 ~W~~l~~~p-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 261 (436)
+-..--+++ .+| .-...+. -+..+|+.... ..+.+.++| .+++-
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~------~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA------AGPAVGLVV-QGGSS 159 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecC------CCCeEEEEE-CCCCE
Confidence 632211111 111 1112222 35578877421 134689999 87754
No 341
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=22.58 E-value=4.3e+02 Score=23.91 Aligned_cols=116 Identities=13% Similarity=0.077 Sum_probs=58.0
Q ss_pred CCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEEC-----CEEEEEecCC-----CeEEE
Q 013797 280 DNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVN-----NELYSLETSS-----NELRV 349 (436)
Q Consensus 280 ~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~-----g~lyv~gg~~-----~~i~~ 349 (436)
+|+|||..- ...|.+++ .++.+.+..++.. ........+++... +.||+..... +.|.+
T Consensus 41 dG~l~V~e~-------~g~I~~i~--~g~~~~~~~~~v~--~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 41 DGGMLIAER-------PGRIRLFR--EGRLSTYAELSVY--HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp TSCEEEEET-------TTEEEEEE--TTEEEEEEECCCC--CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEeC-------CCeEEEEE--CCCccEeecceEe--ecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 567777642 24677777 3444444332210 00111223445543 5899986432 67999
Q ss_pred EECCCCcEE---Ec-ccCCC-ccCCCCCceEEEEEeCCEEEEEcCCCCC-------CCCcEEEEeecCCC
Q 013797 350 YLKDSNSWK---NL-GLVPV-RADFNRGWGIAFKSLGNELLVIGASSTS-------SHESMAIYTCCPSS 407 (436)
Q Consensus 350 yd~~~~~W~---~v-~~~p~-~~~~~~~~~~~~~~~~~~l~v~GG~~~~-------~~~~~~~y~~~p~~ 407 (436)
|+...+... .+ ..+|. ........++++ .-+|.||+.-|.... ....-.+++++|+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~-~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAF-GPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEE-CTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEE-CCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 998765432 22 22332 111122233443 456799998654321 11223577777753
No 342
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.27 E-value=8.2e+02 Score=26.66 Aligned_cols=185 Identities=8% Similarity=0.053 Sum_probs=0.0
Q ss_pred CeEEEEECCCCCEEeCCCCCCCCcccEEEEe-----CCEEEEEcCcCCC---CCCccceEEEEeCCCCCeEeCCCCccCC
Q 013797 200 GVIWRYELETNNWFKGPSMRRPRCLFASATC-----GTFAFVAGGHGMD---GSGVLNSAERYNPETKSWDSLPGMRQRR 271 (436)
Q Consensus 200 ~~v~~ydp~t~~W~~l~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~---~~~~~~~~~~yd~~t~~W~~~~~~p~~r 271 (436)
+.+.++||.+.+=...-.+...-...+++.+ ....+++|-.... .....-.+.+|+...++.+.+...+..-
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Q ss_pred cceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCcEEEcCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCC-eEEEE
Q 013797 272 KLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGTWYHIPDILKDFPAETGKSPPLIAVVNNELYSLETSSN-ELRVY 350 (436)
Q Consensus 272 ~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~W~~v~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~~~-~i~~y 350 (436)
.-.+.+.++|+|.+.-| +.+.+||...++--....... ..-....+.+.++.|++-.-..+ .+..|
T Consensus 887 ~v~al~~~~g~Lla~ig--------~~l~vy~l~~~~~L~~~~~~~-----~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 887 AVYSMVEFNGKLLASIN--------STVRLYEWTTEKELRTECNHY-----NNIMALYLKTKGDFILVGDLMRSVLLLAY 953 (1158)
T ss_dssp CEEEEEEETTEEEEEET--------TEEEEEEECTTSCEEEEEEEC-----CCSCEEEEEEETTEEEEEESSBCEEEEEE
T ss_pred cCEEEeeeCCEEEEEcC--------CEEEEEECCCCceEEEEeecc-----ccEEEEEEeccCCEEEEEEhhheEEEEEE
Q ss_pred ECCCCcEEEcccCCCccCCCCCceEEEEEeCCEEEEEcCCCCCCCCcEEEEeecCC
Q 013797 351 LKDSNSWKNLGLVPVRADFNRGWGIAFKSLGNELLVIGASSTSSHESMAIYTCCPS 406 (436)
Q Consensus 351 d~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~y~~~p~ 406 (436)
+...++-..++. +....+..++..+++.-++.+... .++.+++++|+
T Consensus 954 ~~~~~~L~~~a~-----D~~~~~vta~~~ld~~t~l~aD~~----gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 954 KPMEGNFEEIAR-----DFNPNWMSAVEILDDDNFLGAENA----FNLFVCQKDSA 1000 (1158)
T ss_dssp ETTTTEEEEEEE-----CCSCBCEEEEEEEETTEEEEEETT----SEEEEEEECTT
T ss_pred EcCCCeEEEEEe-----ecccccEEEEEEEccCcEEEEcCC----CcEEEEecCCC
No 343
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.16 E-value=6.3e+02 Score=25.22 Aligned_cols=148 Identities=9% Similarity=-0.069 Sum_probs=72.5
Q ss_pred CCEEEEEceecCCCeEEEEECCCCCEEeCC-CCCC-CCcccEEEE-eCCEEEEEcCcCCCCCCccceEEEEeCCCCCe--
Q 013797 187 GTHLIVSGNEIEGGVIWRYELETNNWFKGP-SMRR-PRCLFASAT-CGTFAFVAGGHGMDGSGVLNSAERYNPETKSW-- 261 (436)
Q Consensus 187 ~~~iyv~GG~~~~~~v~~ydp~t~~W~~l~-~~p~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W-- 261 (436)
+|...+.++. ...+.+||..+ .+..+. .++. .+..++++. -+++..+.||.++ .+.+||..++.-
T Consensus 96 dG~~LAs~s~--dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG-------tVkIWd~~~~~l~~ 165 (588)
T 2j04_A 96 IDDWMAVLSN--NGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG-------ELQFFSIRKNSENT 165 (588)
T ss_dssp SSSCEEEEET--TSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS-------EEEEEECCCCTTTC
T ss_pred CCCEEEEEeC--CCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC-------EEEEEECCCCcccc
Confidence 4444444432 23466676433 444433 2221 223344433 2677777776543 588999887631
Q ss_pred ------EeCCCCccCC--cceeEEEECCEEEEEeccCCCCCcCCEEEEEECCCCc----EEEcCCCCCCCCCCCCCCCCE
Q 013797 262 ------DSLPGMRQRR--KLCSGCYMDNKFYVIGGRNEKDKPLTCGEAYDEYAGT----WYHIPDILKDFPAETGKSPPL 329 (436)
Q Consensus 262 ------~~~~~~p~~r--~~~~~~~~~g~iyv~gG~~~~~~~~~~v~~yD~~~~~----W~~v~~~~~~~~~~~~r~~~~ 329 (436)
..+..-...+ .-.+.+...+. ++.++. -+.+..+|..++. |+.+.... ......
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~------D~tVrlWd~~~~~~~~~~~tL~~~h-------~~~V~s 231 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS------NNSVFSMTVSASSHQPVSRMIQNAS-------RRKITD 231 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET------TCCEEEECCCSSSSCCCEEEEECCC-------SSCCCC
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc-EEEEeC------CCeEEEEECCCCccccceeeecccc-------cCcEEE
Confidence 2211000111 11223344444 566653 3457888887765 33442111 111222
Q ss_pred EEEECCEEEEEecCCCeEEEEECCCCcEEEc
Q 013797 330 IAVVNNELYSLETSSNELRVYLKDSNSWKNL 360 (436)
Q Consensus 330 ~~~~~g~lyv~gg~~~~i~~yd~~~~~W~~v 360 (436)
++..+ ...+.++ .+.|..||..++.=...
T Consensus 232 vaFsg-~~LASa~-~~tIkLWd~~~~~~~~~ 260 (588)
T 2j04_A 232 LKIVD-YKVVLTC-PGYVHKIDLKNYSISSL 260 (588)
T ss_dssp EEEET-TEEEEEC-SSEEEEEETTTTEEEEE
T ss_pred EEEEC-CEEEEEe-CCeEEEEECCCCeEEEE
Confidence 33444 4444444 48999999988765433
Done!