Your job contains 1 sequence.
>013801
MDPNKQNLENPENHSNEEQNPLATIPSQSPFATLSLSFSLPQVLPANTFFIQPKISTLFS
HQPNKVKVPTQASTLTHISLSASSTLSPSKISFKSTLSANPLQSPLSLGPHRPLDPNNGA
AIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASF
LIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIE
AAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGL
PSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPK
GNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGA
GSNWLMFELLWRDFFR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013801
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061961 - symbol:PHR2 "photolyase/blue-light r... 1468 2.0e-150 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 525 1.7e-50 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 261 6.1e-20 1
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 222 1.8e-15 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 220 3.6e-15 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 215 1.4e-14 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 212 2.9e-14 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 211 3.8e-14 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 211 3.8e-14 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 211 3.8e-14 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 210 5.0e-14 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 210 5.3e-14 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 206 1.2e-13 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 205 1.8e-13 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 205 1.8e-13 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 205 1.9e-13 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 205 2.0e-13 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 205 2.0e-13 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 205 2.0e-13 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 204 2.3e-13 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 202 3.3e-13 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 203 3.7e-13 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 202 3.9e-13 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 129 4.8e-13 2
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 129 4.8e-13 2
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 200 6.4e-13 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 200 6.4e-13 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 199 8.7e-13 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 198 8.8e-13 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 198 1.2e-12 1
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 179 6.3e-12 2
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 191 6.9e-12 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 190 8.5e-12 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 190 8.5e-12 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 190 8.9e-12 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 188 1.6e-11 1
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 181 9.1e-11 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 165 3.6e-09 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 166 4.9e-09 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 159 2.5e-08 1
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 155 5.6e-08 1
TAIR|locus:2122654 - symbol:AT4G25290 species:3702 "Arabi... 155 8.2e-08 1
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 152 1.2e-07 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 149 2.5e-07 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 149 2.6e-07 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 142 1.3e-06 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 141 2.0e-06 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 112 2.8e-06 2
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 139 3.3e-06 1
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 111 4.8e-06 2
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 115 2.2e-05 2
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 115 2.2e-05 2
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 123 0.00026 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 120 0.00033 1
>TAIR|locus:2061961 [details] [associations]
symbol:PHR2 "photolyase/blue-light receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0003913 "DNA photolyase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AC002535 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:AF053366 EMBL:AY087383
IPI:IPI00547753 PIR:T00425 RefSeq:NP_182281.1 UniGene:At.10721
UniGene:At.69338 ProteinModelPortal:Q8LB72 SMR:Q8LB72 STRING:Q8LB72
PaxDb:Q8LB72 PRIDE:Q8LB72 EnsemblPlants:AT2G47590.1 GeneID:819372
KEGG:ath:AT2G47590 GeneFarm:2668 TAIR:At2g47590
HOGENOM:HOG000240044 InParanoid:Q8LB72 OMA:TNWLMFE PhylomeDB:Q8LB72
ProtClustDB:CLSN2683619 Genevestigator:Q8LB72 GermOnline:AT2G47590
Uniprot:Q8LB72
Length = 447
Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
Identities = 291/432 (67%), Positives = 342/432 (79%)
Query: 5 KQNLENPENHSNEEQNPLATIPSQSPFATLSLSFSLPQVLPANTFFIQPKISTLFSHQPN 64
++NL NPE S EEQNPLA S P A+LSL+ + P++T F++ LF+H PN
Sbjct: 7 EENL-NPETKSAEEQNPLAIFHSSLPIASLSLT-----LFPSSTQFLK-----LFAHHPN 55
Query: 65 KVKVPTQAXXXXXXXXXXXXXXXXXXXXFKSTLSANPLQSPLSLGPHRPLDPNNGAAIRR 124
KVK+PTQA FKST++ANPLQSPLS+ P RP+DP++ AA+RR
Sbjct: 56 KVKIPTQASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRR 115
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
A++VWFRNDLRVHDNE LN+AN+E VSVLPVYCFDPRDYGKSSSGFDKTGP+RA FLIES
Sbjct: 116 AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIES 175
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
VS+LRKNLQARGS+LVVRVGKPE VLVELAK IGADAVYAHREVSHDEVK+E KIE AMK
Sbjct: 176 VSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMK 235
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLPSRG 304
+EG+EVKYFWGSTLYHLDDLPFK+ ++P+NYG F++KV+ +EIRKTI ALDQLK LPSRG
Sbjct: 236 EEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSRG 295
Query: 305 DVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPKGNKD 364
DVE GDIPSLLDLG+S + SQ GKP +M GGETEAL RLK FAA+ QA+ KGN+
Sbjct: 296 DVELGDIPSLLDLGISPTPRTSQEGKP---TMVGGETEALTRLKSFAADCQARLSKGNQK 352
Query: 365 GNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNW 424
G ++S++GANFSCKISPWLAMG +SPRSMFDELKKT ISA++ +G G NW
Sbjct: 353 GGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKT---ISASTTSTTPRNGPGDTGLNW 409
Query: 425 LMFELLWRDFFR 436
LM+ELLWRDFFR
Sbjct: 410 LMYELLWRDFFR 421
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 118/281 (41%), Positives = 166/281 (59%)
Query: 124 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLI 182
R I RNDLR+HDNE + A + ++P+YCFDPR Y G F KTGP+R FL+
Sbjct: 6 RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLL 65
Query: 183 ESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYA-HREVSHDEVKSEEKIEA 241
+SV DLR L+ GS L+VR GKPE V+ EL K +G+ + A H EV+ +E EEK++
Sbjct: 66 DSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKE 125
Query: 242 AMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVKGV-EIRKTIEALDQLKG 299
+ V+ FWGSTLYH DDLPF +G +P Y FR+ V+ +R + +Q+K
Sbjct: 126 ICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLSTPEQVKS 185
Query: 300 LPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPP 359
PS +E G IP+ LG ++ + P +GGETEAL RLK + + A
Sbjct: 186 PPS--GLEEGPIPTFDSLGQTEPLDDCRSAFPC----RGGETEALARLKHYFWDTNAVAT 239
Query: 360 -KGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKK 399
K ++G + G +FS K SPWLA+GC+SPR +++++KK
Sbjct: 240 YKETRNG----MIGVDFSTKFSPWLALGCISPRYIYEQIKK 276
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 65/216 (30%), Positives = 111/216 (51%)
Query: 230 HDEVKSEEK-IEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNY-GGFREKVKGVEI 287
H+EV SEEK +E +K+ + K T + + ++P ++ GG + +
Sbjct: 109 HEEVASEEKSVEEKLKEICCQNKVRV-QTFW--GSTLYHRDDLPFSHIGGLPDVY--TQF 163
Query: 288 RKTIEALDQLKGLPSRGDVEPGDIPSLLDLG-LSQSAAMSQGGKP-----AANSMKGGET 341
RK +EA +++ + S + + PS L+ G + ++ Q +P +A +GGET
Sbjct: 164 RKAVEAQGRVRPVLSTPE-QVKSPPSGLEEGPIPTFDSLGQT-EPLDDCRSAFPCRGGET 221
Query: 342 EALQRLKKFAAEYQAQPP-KGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RLK + + A K ++G + G +FS K SPWLA+GC+SPR +++++KK
Sbjct: 222 EALARLKHYFWDTNAVATYKETRNG----MIGVDFSTKFSPWLALGCISPRYIYEQIKKY 277
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFR 436
+A + W++FELLWRD+F+
Sbjct: 278 EVERTA------------NQSTYWVIFELLWRDYFK 301
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 261 (96.9 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 96/330 (29%), Positives = 145/330 (43%)
Query: 114 LDPNNGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPR----DYGKSSSG 169
L+P A S++WFR LRVHDN +L A+ S + PV+ DP D S G
Sbjct: 14 LNPITSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPG 73
Query: 170 FDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVS 229
+ G R FL+ES+ DL +L+ GS L+V G+P VLV + + +
Sbjct: 74 SSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTD 133
Query: 230 HDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLG-EMPTNYGGFREKVKGVEIR 288
+ K++ G+EV TL++ + K G + P +Y F KV G
Sbjct: 134 PYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFL-KVAGEPSC 192
Query: 289 KTIEALDQLKGLPSRGDVEP---GDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQ 345
E + LP GD+ ++PSL +LG +GGE+EAL+
Sbjct: 193 AKSELVMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADW------TPFRGGESEALK 246
Query: 346 RLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSIS 405
RL K ++ +A K S + + +SP+L GCLS R + L+
Sbjct: 247 RLTKSISD-KAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNI----- 300
Query: 406 AASKWNDGESGSSGAGSNWLMFELLWRDFF 435
+ D + +S S L+ +LLWR+FF
Sbjct: 301 ----YKDVKKHTSPPVS--LLGQLLWREFF 324
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 222 (83.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 80/289 (27%), Positives = 140/289 (48%)
Query: 123 RRASIV-WFRNDLRVHDNESLN---TANNESVS---VLPVYCFDPRDYGKSSSGFDKTGP 175
+R+++V WFR LR+HDN +L+ TA N + V P++ DP + + G
Sbjct: 4 QRSTLVHWFRKGLRLHDNPALSHIFTAANAAPGKYFVRPIFILDP-----GILDWMQVGA 58
Query: 176 YRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKS 235
R FL +++ DL L+ S L V GKP V + K+ + + ++ V
Sbjct: 59 NRWRFLQQTLEDLDNQLRKLNSRLFVVRGKPAEVFPRIFKSWRVEMLTFETDIEPYSVTR 118
Query: 236 EEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVKGVEIRKTIEAL 294
+ ++ K EG+ V+ T+Y+ + + K LG+ P Y F V+ +++ K +
Sbjct: 119 DAAVQKLAKAEGVRVETHCSHTIYNPELVIAKNLGKAPITYQKFLGIVEQLKVPKVLGVP 178
Query: 295 DQLKGLPS--RGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAA 352
++LK +P+ + +VE D + + Q + P N GGETEAL+R+++
Sbjct: 179 EKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGP--NKFPGGETEALRRMEESLK 236
Query: 353 E--YQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKK 399
+ + A+ K N N S+ + + +SP+L GCLS R +LK+
Sbjct: 237 DEIWVARFEKPNTAPN--SLEPS--TTVLSPYLKFGCLSARLFNQKLKE 281
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 220 (82.5 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 99/323 (30%), Positives = 142/323 (43%)
Query: 121 AIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASF 180
A+ +I FR LR+HDN SL A S ++ PVY D R + G G R F
Sbjct: 21 AMSHRTIHLFRKGLRLHDNPSLLGALASSSALYPVYVLD-RVF---LQGAMHMGALRWRF 76
Query: 181 LIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIE 240
L++S+ DL LQA GS L V G +L EL G + EV + ++ I+
Sbjct: 77 LLQSLEDLDTRLQAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQ 136
Query: 241 AAMKDEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFRE--KVKGVEIR--KTIEALD 295
++ G++ TLY + + G P Y F V G + + + D
Sbjct: 137 TVAQENGLQTYTCVSHTLYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKPARDVSIED 196
Query: 296 -QLKGLPSRGDVEPG-DIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAE 353
Q + S DV+ +PSL DLGL A + P GGE+ ALQRL+K
Sbjct: 197 FQRRQQQSMMDVDRVYAVPSLADLGLQVEAEVLW---P------GGESHALQRLEKHFQS 247
Query: 354 YQAQPPKGNKDGN-HDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWND 412
Q +K +S+ + +SP+L++GCLS R+ + L SI A SK N
Sbjct: 248 QQGWVANFSKPRTIPNSLLPSTTG--LSPYLSLGCLSVRTFYHRLN----SIYAQSK-NH 300
Query: 413 GESGSSGAGSNWLMFELLWRDFF 435
S G ++LWR+FF
Sbjct: 301 SLPPVSLQG------QVLWREFF 317
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 215 (80.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 84/281 (29%), Positives = 130/281 (46%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 23 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 77
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 78 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 137
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEALDQLKGLPS 302
+ G+EV TLY LD + G+ P Y F+ + +E+ +K + ++ +
Sbjct: 138 EAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQAIISRMELPKKPVGSVTSQQMESC 197
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R D++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 198 RADIQDNHDDTYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ERKAW 249
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 250 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 288
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 72/265 (27%), Positives = 113/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 67 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 126
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ +K +
Sbjct: 127 ERDAAIMKMAKEAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQAIISRMELPKKPV 186
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
++ + R D++ + L + ++G PA +GGETEAL RL K
Sbjct: 187 GSVTSQQMESCRADIQDNHDDTYGVPSLEELGFPTEGLGPAV--WQGGETEALARLDKHL 244
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 245 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYKKV----KR 297
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 298 NSTPPLS-------LFGQLLWREFF 315
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 212 (79.7 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 81/280 (28%), Positives = 129/280 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
S+ WFR LR+HDN +L A + S+ +Y DP S+ G ++ +R FL++S+
Sbjct: 14 SVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASSAVGINR---WR--FLLQSL 68
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
DL +L+ S L V G+P V L K G + + + + I K+
Sbjct: 69 EDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLAFEYDSEPFGKERDAAIIKLAKE 128
Query: 246 EGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEALDQLKGLPSR 303
G+EV TLY+LD + G P Y F+ + +E+ +K + ++ + +
Sbjct: 129 AGVEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQAIISRMELPKKPVSSIVSQQMETCK 188
Query: 304 GDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQP 358
D++ +PSL +LG + G PA +GGETEAL RL K E +A
Sbjct: 189 VDIQENHDDVYGVPSLEELGFP-----TDGLAPAV--WQGGETEALARLDKHL-ERKAWV 240
Query: 359 PKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 241 ANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 278
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 71/265 (26%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 57 GINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLAFEYDSEPFGK 116
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY+LD + G P Y F+ + +E+ +K +
Sbjct: 117 ERDAAIIKLAKEAGVEVVIENSHTLYNLDRIIELNGNKPPLTYKRFQAIISRMELPKKPV 176
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
++ + + D++ L + + G PA +GGETEAL RL K
Sbjct: 177 SSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAV--WQGGETEALARLDKHL 234
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + + K
Sbjct: 235 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWELYKKV----KR 287
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 288 NSTPPLS-------LYGQLLWREFF 305
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 211 (79.3 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 84/281 (29%), Positives = 129/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 22 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 76
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 77 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 136
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEALDQLKGLPS 302
+ G+EV TLY LD + G+ P Y F+ + +E+ +K A+ +
Sbjct: 137 EAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPAVAVSSQQMESC 196
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R +++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ERKAW 248
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 249 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 287
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 72/265 (27%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 66 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 125
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ +K
Sbjct: 126 ERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPA 185
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
A+ + R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 186 VAVSSQQMESCRAEIQENHDDTYGVPSLEELGFPTEGLGPAV--WQGGETEALARLDKHL 243
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 244 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYKKV----KR 296
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 297 NSTPPLS-------LFGQLLWREFF 314
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 211 (79.3 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 84/281 (29%), Positives = 129/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 22 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 76
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 77 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 136
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEALDQLKGLPS 302
+ G+EV TLY LD + G+ P Y F+ + +E+ +K + A+
Sbjct: 137 EAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENC 196
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R +++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFP-----TEGLGPAV--WQGGETEALVRLDKHL-ERKAW 248
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 249 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 287
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 72/265 (27%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 66 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 125
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ +K +
Sbjct: 126 ERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPV 185
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
A+ R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 186 GAVSSQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAV--WQGGETEALVRLDKHL 243
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 244 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYRKV----KR 296
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 297 NSTPPLS-------LFGQLLWREFF 314
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 211 (79.3 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 84/281 (29%), Positives = 129/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 22 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 76
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 77 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 136
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEALDQLKGLPS 302
+ G+EV TLY LD + G+ P Y F+ + +E+ +K + A+
Sbjct: 137 EAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPVGAVSSQHMENC 196
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R +++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 197 RAEIQENHDDTYGVPSLEELGFP-----TEGLGPAV--WQGGETEALVRLDKHL-ERKAW 248
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 249 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 287
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 72/265 (27%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 66 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 125
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ +K +
Sbjct: 126 ERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQALISRMELPKKPV 185
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
A+ R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 186 GAVSSQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAV--WQGGETEALVRLDKHL 243
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 244 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYRKV----KR 296
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 297 NSTPPLS-------LFGQLLWREFF 314
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 210 (79.0 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 85/281 (30%), Positives = 129/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 23 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 77
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 78 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 137
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIEALDQLKGLPS- 302
+ G+EV TLY LD + G+ P Y F+ + +E+ K L + + S
Sbjct: 138 EAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESC 197
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R +++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 198 RAEIQENHDETYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ERKAW 249
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 250 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 288
Score = 145 (56.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 73/265 (27%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 67 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 126
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIE 292
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ K
Sbjct: 127 ERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPV 186
Query: 293 ALDQLKGLPS-RGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
L + + S R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 187 GLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAV--WQGGETEALARLDKHL 244
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 245 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYKKV----KR 297
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 298 NSTPPLS-------LFGQLLWREFF 315
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 210 (79.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 85/281 (30%), Positives = 129/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 44 SSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINR---WR--FLLQS 98
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V L K G + + + + I K
Sbjct: 99 LEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAK 158
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIEALDQLKGLPS- 302
+ G+EV TLY LD + G+ P Y F+ + +E+ K L + + S
Sbjct: 159 EAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPVGLVTSQQMESC 218
Query: 303 RGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
R +++ +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 219 RAEIQENHDETYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ERKAW 270
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 271 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 309
Score = 145 (56.1 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 73/265 (27%), Positives = 112/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 88 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGK 147
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIE 292
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ K
Sbjct: 148 ERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELNGQKPPLTYKRFQAIISRMELPKKPV 207
Query: 293 ALDQLKGLPS-RGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
L + + S R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 208 GLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAV--WQGGETEALARLDKHL 265
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 266 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYKKV----KR 318
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 319 NSTPPLS-------LFGQLLWREFF 336
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 102/343 (29%), Positives = 149/343 (43%)
Query: 101 PLQSPLSLGPHRPLDPNNGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDP 160
P S L L P P P G +R +I FR LR+HDN +L A S V PVY D
Sbjct: 1 PEPSLLLLPPTPP--PAQGR-MRHRTIHLFRKGLRLHDNPALLAALQSSEVVYPVYILD- 56
Query: 161 RDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGAD 220
R + SS G R FL++S+ DLR +L+ GS L+V G+ E+V+ + +
Sbjct: 57 RAFMTSSMHI---GALRWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNIT 113
Query: 221 AVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDD-LPFKLGEMPTNYGGFR 279
V E+ + E I ++ G +V G +LY+ L G P Y F
Sbjct: 114 QVTLDAEMEPFYKEMEANIRGLGEELGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFL 173
Query: 280 E--KVKG---VEIRK-TIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAA 333
+ G V +R T E + P G E +P DL + +
Sbjct: 174 RILSLLGDPEVPVRNPTAEDFQRCSP-PELGLAECYGVPLPTDLKIPPESI--------- 223
Query: 334 NSMKGGETEALQRLKKFAAEYQAQPPKGNKDGN-HDSIYGANFSCKISPWLAMGCLSPRS 392
+ +GGE+E LQRL++ A+ Q K +S+ + +SP+ + GCLS RS
Sbjct: 224 SPWRGGESEGLQRLEQHLAD-QGWVASFTKPKTVPNSLLPSTTG--LSPYFSTGCLSVRS 280
Query: 393 MFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
F L ++I A +K + S L +LLWR+FF
Sbjct: 281 FFYRL----SNIYAQAKHHSLPPVS-------LQGQLLWREFF 312
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 85/284 (29%), Positives = 134/284 (47%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVI 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 72/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + + + D + + G P+A GGET
Sbjct: 158 SKMEPLEIPVETITS-EVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 205 (77.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 85/284 (29%), Positives = 134/284 (47%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVI 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 72/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + + + D + + G P+A GGET
Sbjct: 158 SKMEPLEIPVETITS-EVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 205 (77.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 82/281 (29%), Positives = 127/281 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ +R FL++S
Sbjct: 43 SSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVGINR---WR--FLLQS 97
Query: 185 VSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK 244
+ DL +L+ S L V G+P V ++ G + + + + I K
Sbjct: 98 LEDLDTSLRKLNSRLFVVRGQPADVFPGYSREWGVTRLTFEYDSEPFGKERDAAIMKMAK 157
Query: 245 DEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRK------TIEALDQL 297
+ G+EV TLY LD + G+ P Y F+ + +E+ K T + ++
Sbjct: 158 EAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQALISRMELPKKPVGSVTSQQMESC 217
Query: 298 KGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQ 357
+ E +PSL +LG ++G PA +GGETEAL RL K E +A
Sbjct: 218 RAEIQENHDETYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ERKAW 269
Query: 358 PPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + L
Sbjct: 270 VANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 308
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 69/265 (26%), Positives = 113/265 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V ++ G + +
Sbjct: 87 GINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPGYSREWGVTRLTFEYDSEPFGK 146
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G+ P Y F+ + +E+ +K +
Sbjct: 147 ERDAAIMKMAKEAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQALISRMELPKKPV 206
Query: 292 EALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA 351
++ + R +++ + L + ++G PA +GGETEAL RL K
Sbjct: 207 GSVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAV--WQGGETEALARLDKHL 264
Query: 352 AEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKW 410
E +A + N +S+ + +SP+L GCLS R + L + K
Sbjct: 265 -ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRLWDLYKKV----KR 317
Query: 411 NDGESGSSGAGSNWLMFELLWRDFF 435
N S L +LLWR+FF
Sbjct: 318 NSTPPLS-------LFGQLLWREFF 335
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 85/284 (29%), Positives = 131/284 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + +V VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + A + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLSIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEALD---- 295
+ G+EV TLY LD + G+ P Y F+ + +E + +E +
Sbjct: 116 LASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVM 175
Query: 296 QLKGLPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
Q P D E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 QKCTTPVSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 74/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K + A
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLS 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + V D + + G P+A GGET
Sbjct: 158 SRMEPLEMPVETITPEVMQKCTTPVSD-DHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 85/284 (29%), Positives = 131/284 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + +V VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + A + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLSIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEALD---- 295
+ G+EV TLY LD + G+ P Y F+ + +E + +E +
Sbjct: 116 LASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVM 175
Query: 296 QLKGLPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
Q P D E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 QKCTTPVSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 74/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K + A
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLS 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + V D + + G P+A GGET
Sbjct: 158 SRMEPLEMPVETITPEVMQKCTTPVSD-DHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 85/284 (29%), Positives = 131/284 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + +V VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALRECIRGADTVRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + A + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLSIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEALD---- 295
+ G+EV TLY LD + G+ P Y F+ + +E + +E +
Sbjct: 116 LASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISRMEPLEMPVETITPEVM 175
Query: 296 QLKGLPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
Q P D E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 QKCTTPVSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 74/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K + A
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFK----EWSIAKLS 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLASEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + V D + + G P+A GGET
Sbjct: 158 SRMEPLEMPVETITPEVMQKCTTPVSD-DHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 204 (76.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 85/284 (29%), Positives = 134/284 (47%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVV 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG G P+A GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTD------GLPSA-VWPGGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 72/275 (26%), Positives = 114/275 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ +
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLI 157
Query: 283 KGVE-IRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGET 341
+E + +E + + + D + + G P+A GGET
Sbjct: 158 SKMEPLEIPVETITS-EVVEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSA-VWPGGET 215
Query: 342 EALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
EAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 216 EALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL--- 269
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 -TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 202 (76.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 96/320 (30%), Positives = 151/320 (47%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
+I WFR LR+HDN +L A + + P++ DP + K++ + G R FLIE++
Sbjct: 31 TIHWFRKGLRLHDNPALIAALKDCRHIYPLFLLDPW-FPKNT----RIGINRWRFLIEAL 85
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVS-HDEVKSEEKIEAAMK 244
DL +L+ S L V G P VL +L K + + + + + +E ++ A K
Sbjct: 86 KDLDSSLKKLNSRLFVVRGSPTEVLPKLFKQWKITRLTFEVDTEPYSQSRDKEVMKLA-K 144
Query: 245 DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGV-EIRKTIEAL--DQLKGL 300
+ G+EV TLY++D + G+ P Y + VK + +K I A + ++G+
Sbjct: 145 EYGVEVTPKISHTLYNIDRIIDENNGKTPMTYIRLQSVVKAMGHPKKPIPAPTNEDMRGV 204
Query: 301 --PSRGDVEPG-DIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFA--AEYQ 355
P D E IP+L DLGL S S G P + GGE EAL+RL + +
Sbjct: 205 STPLSDDHEEKFGIPTLEDLGLDTS---SLG--P--HLFPGGEQEALRRLDEHMERTNWV 257
Query: 356 AQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGES 415
+ K N S+ + + +SP++ GCLS R + L A + G++
Sbjct: 258 CKFEKPKTSPN--SLIPS--TTVLSPYVRFGCLSARIFWWRL---------ADVYR-GKT 303
Query: 416 GSSGAGSNWLMFELLWRDFF 435
S S L +LLWR+FF
Sbjct: 304 HSDPPVS--LHGQLLWREFF 321
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 203 (76.5 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 85/292 (29%), Positives = 136/292 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
SI WFR LR+HDN +L A + +V VY DP G S+ G ++ +R FL++ +
Sbjct: 5 SIHWFRKGLRLHDNPALQEAVRGADTVRCVYFLDPWFAGSSNLGVNR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
DL NL+ S L V G+P V L K + + + + I+ +
Sbjct: 60 DDLDSNLRKLNSRLFVVRGQPANVFPRLFKEWKISRLTFEYDSEPFGKERDAAIKKLAME 119
Query: 246 EGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVEIRKT-IEAL-DQLKGL-P 301
G+EV TLY+LD + G+ P Y F+ + ++ + +E L + + G
Sbjct: 120 AGVEVIVKTSHTLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVETLSNSIMGCCV 179
Query: 302 SRGDVEPGD---IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQP 358
+ + GD +PSL +LG G P+A GGETEAL R+++ E +A
Sbjct: 180 TPVSEDHGDKYGVPSLEELGFDIE------GLPSA-VWPGGETEALTRIERHL-ERKAWV 231
Query: 359 PKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPR-------SMFDELKKTAT 402
+ N +S+ + +SP+L GCLS R ++ ++KKT+T
Sbjct: 232 ANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKLTDLYRKVKKTST 281
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 202 (76.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 84/284 (29%), Positives = 134/284 (47%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L+V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLLVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVI 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 RAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 129 (50.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 123 RRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDP-RDYGKSSSGFDKTGPYRASFL 181
++ + WF NDLRV+DN L A+ + ++ +YC+ + + + G + FL
Sbjct: 3 KKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFL 62
Query: 182 IESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEA 241
++++DL +L G L V P L L + +Y DE ++ +I
Sbjct: 63 NQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQ 122
Query: 242 AMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEI 287
I + +L LPF L +P+ + FR++V+ + +
Sbjct: 123 DFSSVHIHQQAL--HSLLSEPQLPFALEALPSTFTQFRKQVETISL 166
Score = 118 (46.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 330 KPAANSMKGGETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLS 389
+P ++ GGE L + + + + P K+ + + G ++S K SPWLA+G +S
Sbjct: 193 EPNHSAFVGGEQAGLTHCQNY---FSSLLPSRYKE-TRNGLDGMDYSTKFSPWLALGAVS 248
Query: 390 PRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
P++++ L++ ++ A ND + W+ FELLWR++F
Sbjct: 249 PKTIYAMLQRYE-AVHGA---NDS--------TYWIFFELLWREYF 282
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 129 (50.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 123 RRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDP-RDYGKSSSGFDKTGPYRASFL 181
++ + WF NDLRV+DN L A+ + ++ +YC+ + + + G + FL
Sbjct: 3 KKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFL 62
Query: 182 IESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEA 241
++++DL +L G L V P L L + +Y DE ++ +I
Sbjct: 63 NQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQ 122
Query: 242 AMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEI 287
I + +L LPF L +P+ + FR++V+ + +
Sbjct: 123 DFSSVHIHQQAL--HSLLSEPQLPFALEALPSTFTQFRKQVETISL 166
Score = 118 (46.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 330 KPAANSMKGGETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLS 389
+P ++ GGE L + + + + P K+ + + G ++S K SPWLA+G +S
Sbjct: 193 EPNHSAFVGGEQAGLTHCQNY---FSSLLPSRYKE-TRNGLDGMDYSTKFSPWLALGAVS 248
Query: 390 PRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
P++++ L++ ++ A ND + W+ FELLWR++F
Sbjct: 249 PKTIYAMLQRYE-AVHGA---NDS--------TYWIFFELLWREYF 282
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 200 (75.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 84/284 (29%), Positives = 133/284 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVI 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 200 (75.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 84/284 (29%), Positives = 133/284 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIR-KTI--EAL 294
+ G+EV TLY LD + G+ P Y F+ K++ +EI +TI E +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVI 175
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
++ S E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 EKCTTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 199 (75.1 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 82/283 (28%), Positives = 132/283 (46%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
S+ WFR LR+HDN +L A N + +V VY DP G ++ G ++ +R FL+ES+
Sbjct: 5 SVHWFRKGLRLHDNPALQEALNGADTVRCVYILDPWFAGSANVGVNR---WR--FLLESL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAV-YAHREVSHDEVKSEEKIEAAMK 244
DL +L+ S L V G+P V L K + + + + + + I+ A +
Sbjct: 60 EDLDTSLRKLNSRLSVVRGQPTDVFPRLFKEWNVTRLTFEYDSEPYGKERDAAIIKMA-Q 118
Query: 245 DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVEI-RKTIEALDQLKGLPS 302
+ G+E TLY+ D + P + F+ V +E+ RK + + Q +
Sbjct: 119 EYGVETVVRNSHTLYNPDRIIEMNNHSPPLTFKRFQAIVNRLELPRKPLPTITQEQMARC 178
Query: 303 RGDV-----EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAE--YQ 355
R + E +PSL +LG +QG + + KGGETEAL+RL K +
Sbjct: 179 RTQISDNHDEHYGVPSLEELGFR-----TQGD--SLHVWKGGETEALERLNKHLDRKAWV 231
Query: 356 AQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELK 398
A + G S++ + +SP+L GCLS R + L+
Sbjct: 232 ANFERPRISGQ--SLFPSPTG--LSPYLRFGCLSCRVFYYNLR 270
Score = 128 (50.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 70/273 (25%), Positives = 113/273 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAV-YAHR 226
+G G R FL+ES+ DL +L+ S L V G+P V L K + + +
Sbjct: 42 AGSANVGVNRWRFLLESLEDLDTSLRKLNSRLSVVRGQPTDVFPRLFKEWNVTRLTFEYD 101
Query: 227 EVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGV 285
+ + + I+ A ++ G+E TLY+ D + P + F+ V +
Sbjct: 102 SEPYGKERDAAIIKMA-QEYGVETVVRNSHTLYNPDRIIEMNNHSPPLTFKRFQAIVNRL 160
Query: 286 EI-RKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEAL 344
E+ RK + + Q + R + L + +QG + + KGGETEAL
Sbjct: 161 ELPRKPLPTITQEQMARCRTQISDNHDEHYGVPSLEELGFRTQGD--SLHVWKGGETEAL 218
Query: 345 QRLKKFAAE--YQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTAT 402
+RL K + A + G S++ + +SP+L GCLS R + L+
Sbjct: 219 ERLNKHLDRKAWVANFERPRISGQ--SLFPSPTG--LSPYLRFGCLSCRVFYYNLRDLFM 274
Query: 403 SISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
+ S S S L +LLWR+FF
Sbjct: 275 KLRRRS---------SPPLS--LFGQLLWREFF 296
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 198 (74.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 94/322 (29%), Positives = 141/322 (43%)
Query: 122 IRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFL 181
+R +I FR LR+HDN +L A S V PVY D R + SS G R FL
Sbjct: 1 MRHRTIHLFRKGLRLHDNPALLAALQSSEVVYPVYILD-RAFMTSSMHI---GALRWHFL 56
Query: 182 IESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEA 241
++S+ DLR +L+ GS L+V G+ E+V+ + + V E+ + E I
Sbjct: 57 LQSLEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEANIRG 116
Query: 242 AMKDEGIEVKYFWGSTLYHLDD-LPFKLGEMPTNYGGFRE--KVKG---VEIRK-TIEAL 294
++ G +V G +LY+ L G P Y F + G V +R T E
Sbjct: 117 LGEELGFQVLSLMGHSLYNTQRILELNGGTPPLTYKRFLRILSLLGDPEVPVRNPTAEDF 176
Query: 295 DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
+ P G E +P DL + + + +GGE+E LQRL++ A+
Sbjct: 177 QRCSP-PELGLAECYGVPLPTDLKIPPESI---------SPWRGGESEGLQRLEQHLAD- 225
Query: 355 QAQPPKGNKDGN-HDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDG 413
Q K +S+ + +SP+ + GCLS RS F L ++I A +K +
Sbjct: 226 QGWVASFTKPKTVPNSLLPSTTG--LSPYFSTGCLSVRSFFYRL----SNIYAQAKHHSL 279
Query: 414 ESGSSGAGSNWLMFELLWRDFF 435
S L +LLWR+FF
Sbjct: 280 PPVS-------LQGQLLWREFF 294
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 198 (74.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 82/280 (29%), Positives = 128/280 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN SL + + SV VY DP G S+ G + +R FL++ +
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAGSSNVGISR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
DL +L+ S L V G+P V L K + + + + + I+ +
Sbjct: 60 EDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYDSEPFGKERDAAIKKLANE 119
Query: 246 EGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVEIRKT-IEALD-QLKG--- 299
G+EV TLY LD + G+ P Y F+ + +E +T E + ++ G
Sbjct: 120 AGVEVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCT 179
Query: 300 LPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQP 358
P D E +PSL +LG + +S P GGETEAL RL++ E +A
Sbjct: 180 TPLSDDHDEKFGVPSLEELGFD-TEGLSSAVWP------GGETEALTRLERHL-ERKAWV 231
Query: 359 PKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + +L
Sbjct: 232 ANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 70/272 (25%), Positives = 112/272 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL +L+ S L V G+P V L K + + +
Sbjct: 42 AGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYD 101
Query: 228 VSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE 286
+ + I+ + G+EV TLY LD + G+ P Y F+ + +E
Sbjct: 102 SEPFGKERDAAIKKLANEAGVEVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRME 161
Query: 287 IRKT-IEALD-QLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEAL 344
+T E + ++ G P + L + ++G A GGETEAL
Sbjct: 162 AVETPAETITAEVMG-PCTTPLSDDHDEKFGVPSLEELGFDTEGLSSAV--WPGGETEAL 218
Query: 345 QRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATS 403
RL++ E +A + N +S+ + +SP+L GCLS R + +L T
Sbjct: 219 TRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL----TD 271
Query: 404 ISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
+ K N S L +LLWR+FF
Sbjct: 272 LYRKVKKNSSPPLS-------LYGQLLWREFF 296
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 179 (68.1 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 78/282 (27%), Positives = 118/282 (41%)
Query: 124 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIE 183
RA I W R DLR+ D+ L A V+PV+ D +S + +R +E
Sbjct: 5 RAIIYWLRRDLRLADHPGLAAAAASGRPVVPVFIHD-----ESVAALGAAPAFRLGLGLE 59
Query: 184 SVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAM 243
L GS L++R G VL L GA AV+ RE + + + ++ A+
Sbjct: 60 RFG---ATLGDMGSRLILRRGSAPAVLQALIAETGAGAVWWTREYTPQAITRDSALKTAL 116
Query: 244 KDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKV----KGVEIRKTIEALDQLKG 299
+ GIE + F G+ L+ P+ + T GGF + + V R+ + A D
Sbjct: 117 QQAGIEARSFGGALLFE----PWTV---ETGAGGFYKVYTPFWRAVSQRE-VSAPDPAPA 168
Query: 300 LPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPP 359
+ PG +L D GL A M +G A GE AL+RL +F A
Sbjct: 169 RVRPPEAWPGS-EALSDWGLG--APMRRGAAVVATHQAPGEAAALERLDRFIAT-----G 220
Query: 360 KGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTA 401
G D D G S +S L++G + PR+++ + A
Sbjct: 221 IGQYDACRDLPAGDGTST-LSDALSLGEIGPRTLWHRAGEAA 261
Score = 53 (23.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 404 ISAASKWND-GESGSSGA-GSNWLMFELLWRDF 434
I + W+ GE+ GA G+ + +L+WRDF
Sbjct: 248 IGPRTLWHRAGEAAHKGAQGAETFLKQLVWRDF 280
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 191 (72.3 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 82/284 (28%), Positives = 130/284 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFR---EKVKGVEIRKTIEALDQL 297
+ G+EV TLY LD + G+ P Y F+ K++ +E+ D +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVI 175
Query: 298 -KGLPSRGDV--EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
K + D E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 GKCMTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 73/276 (26%), Positives = 112/276 (40%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ V
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLV 157
Query: 283 KGVEIRKTIEALDQLKGLPSRGDVEP--GDIPSLLDLGLSQSAAMSQGGKPAANSMKGGE 340
+E + D + + P D + + G +A GGE
Sbjct: 158 SKMEPLEM--PADTITSDVIGKCMTPLSDDHDEKYGVPSLEELGFDTDGLSSA-VWPGGE 214
Query: 341 TEALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKK 399
TEAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 215 TEALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL-- 269
Query: 400 TATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 --TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 190 (71.9 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 82/284 (28%), Positives = 129/284 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEAL-DQLK 298
+ G+EV TLY LD + G+ P Y F+ V +E + + + +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVI 175
Query: 299 G---LPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
G P D E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 GKCTTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 72/276 (26%), Positives = 114/276 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ V
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLV 157
Query: 283 KGVE-IRKTIEAL-DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGE 340
+E + + + + G + + D + + G +A GGE
Sbjct: 158 SKMEPLEMPADTITSDVIGKCTTPLSDDHD--EKYGVPSLEELGFDTDGLSSA-VWPGGE 214
Query: 341 TEALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKK 399
TEAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 215 TEALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL-- 269
Query: 400 TATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 --TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 190 (71.9 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 82/284 (28%), Positives = 129/284 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN +L + ++ VY DP G S+ G ++ +R FL++ +
Sbjct: 5 AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK- 244
DL NL+ S L V G+P V L K + + +D ++ +AA+K
Sbjct: 60 EDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----SIEYDSEPFGKERDAAIKK 115
Query: 245 ---DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEAL-DQLK 298
+ G+EV TLY LD + G+ P Y F+ V +E + + + +
Sbjct: 116 LATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVI 175
Query: 299 G---LPSRGDV-EPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
G P D E +PSL +LG +S P GGETEAL RL++ E
Sbjct: 176 GKCTTPLSDDHDEKYGVPSLEELGFDTDG-LSSAVWP------GGETEALTRLERHL-ER 227
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + +L
Sbjct: 228 KAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 72/276 (26%), Positives = 114/276 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL NL+ S L V G+P V L K +
Sbjct: 42 AGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKL----S 97
Query: 228 VSHDEVKSEEKIEAAMK----DEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKV 282
+ +D ++ +AA+K + G+EV TLY LD + G+ P Y F+ V
Sbjct: 98 IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLV 157
Query: 283 KGVE-IRKTIEAL-DQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGE 340
+E + + + + G + + D + + G +A GGE
Sbjct: 158 SKMEPLEMPADTITSDVIGKCTTPLSDDHD--EKYGVPSLEELGFDTDGLSSA-VWPGGE 214
Query: 341 TEALQRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKK 399
TEAL RL++ E +A + N +S+ + +SP+L GCLS R + +L
Sbjct: 215 TEALTRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL-- 269
Query: 400 TATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
T + K N S L +LLWR+FF
Sbjct: 270 --TDLYKKVKKNSSPPLS-------LYGQLLWREFF 296
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 190 (71.9 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 78/280 (27%), Positives = 126/280 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++ WFR LR+HDN SL + + ++ VY DP G S+ G + +R FL++ +
Sbjct: 5 TVHWFRKGLRLHDNPSLRDSIKGADNLRCVYILDPWFAGSSNVGISR---WR--FLLQCL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
DL +L+ S L V G+P V L K + + + I +
Sbjct: 60 EDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISRLSYEYDSEPFGKDRDAAIRKLATE 119
Query: 246 EGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE-IRKTIEALD-QLKGLPS 302
G+EV TLY LD + F G+ P Y F+ + ++ + E + ++ G S
Sbjct: 120 AGVEVFVRISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMDPVEMPAETITAEIMGKCS 179
Query: 303 RGDVEPGD----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQP 358
+ D +PSL +LG ++ +S P GGETEAL RL++ E +A
Sbjct: 180 TPVSDDHDNKFGVPSLEELGF-ETEGLSTAVWP------GGETEALTRLERHL-ERKAWV 231
Query: 359 PKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+ N +S+ + +SP+L GCLS R + +L
Sbjct: 232 ANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL 269
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 71/272 (26%), Positives = 112/272 (41%)
Query: 168 SGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHRE 227
+G G R FL++ + DL +L+ S L V G+P V L K + +
Sbjct: 42 AGSSNVGISRWRFLLQCLEDLDASLRKLNSRLFVIRGQPTDVFPRLFKEWKISRLSYEYD 101
Query: 228 VSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVE 286
+ I + G+EV TLY LD + F G+ P Y F+ + ++
Sbjct: 102 SEPFGKDRDAAIRKLATEAGVEVFVRISHTLYDLDKIIEFNGGQSPLTYKRFQTLISRMD 161
Query: 287 -IRKTIEALD-QLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEAL 344
+ E + ++ G S + D + L + ++G A GGETEAL
Sbjct: 162 PVEMPAETITAEIMGKCSTPVSDDHDNKFGVP-SLEELGFETEGLSTAV--WPGGETEAL 218
Query: 345 QRLKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATS 403
RL++ E +A + N +S+ + +SP+L GCLS R + +L T
Sbjct: 219 TRLERHL-ERKAWVANFERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYFKL----TD 271
Query: 404 ISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
+ K N S S L +LLWR+FF
Sbjct: 272 LYRKVKKNSTPSLS-------LYGQLLWREFF 296
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 92/324 (28%), Positives = 144/324 (44%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
S+ WFR LR+HDN +L A N + ++ VY DP G S+ G ++ +R FL++S+
Sbjct: 5 SVHWFRKGLRLHDNPALLEALNGADTLRCVYFLDPWFAGASNLGVNR---WR--FLLQSL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
DL +L+ S L V G+P + L K + + + + I+ +
Sbjct: 60 EDLDASLRKLNSCLFVIRGQPADIFPRLFKEWKVSRLTFEFDSEPFGKERDAAIKKLACE 119
Query: 246 EGIEVKYFWGSTLYHLDDL-PFKLGEMPTNYGGFREKVKGVEIRKT-IEALDQ-LKG--- 299
G+EV TLY LD + G+ P Y F+ V +E + + D+ + G
Sbjct: 120 AGVEVIVKISHTLYDLDRIIELNGGQSPLTYKRFQTLVSSMEPPDPPLSSPDRGMMGKCV 179
Query: 300 LP-SRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKF-------A 351
P S + +P L +LG ++G PA GGE+EAL+R+++ A
Sbjct: 180 TPISENHRDKYGVPLLEELGFD-----TEGLAPAV--WPGGESEALKRMERHLGPDSTVA 232
Query: 352 AEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWN 411
+ + PK N S G +SP+L GCLS R + +L T + K N
Sbjct: 233 WQENFERPKMNASPLMASPLG------LSPYLRFGCLSCRLFYCKL----TQLYKKVKKN 282
Query: 412 DGESGSSGAGSNWLMFELLWRDFF 435
S S L ++LWR+FF
Sbjct: 283 MNPSIS-------LYDKILWREFF 299
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 181 (68.8 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 71/297 (23%), Positives = 138/297 (46%)
Query: 124 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRAS--FL 181
+ +IVWFR DLR+ DN +L A +E SV PV+ + P + G+ G RAS ++
Sbjct: 5 KKTIVWFRRDLRIEDNPALAAAAHEG-SVFPVFIWCPEEEGQFYPG-------RASRWWM 56
Query: 182 IESVSDLRKNLQARGSDL-VVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIE 240
+S++ L ++L+A GSDL +++ + +++ + GA V + + + ++
Sbjct: 57 KQSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHTVK 116
Query: 241 AAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGL 300
+ + GI V+ + G LY ++ + G+ T++ + +K + I +++ + +
Sbjct: 117 EKLVERGISVQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSI-ESVMLPPPWRLM 175
Query: 301 PSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPK 360
P E S+ +LGL A + G + A + L +F + K
Sbjct: 176 PITAAAEAIWACSIEELGLENEAEKPSNAL-LTRAWSPGWSNADKLLNEFIEKQLIDYAK 234
Query: 361 GNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGS 417
+K + G N + +SP+L G +S R +F + + I A K ++GE +
Sbjct: 235 NSK-----KVVG-NSTSLLSPYLHFGEISVRHVF-QCARMKQIIWARDKNSEGEESA 284
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 71/271 (26%), Positives = 119/271 (43%)
Query: 127 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVS 186
++W R+DLRVHDN +L TA E L VY P + +S D + F + ++
Sbjct: 3 LIWLRSDLRVHDNTAL-TAAMERGPTLAVYLLSPAQW-RSHDDAD----CKVDFWLRNLV 56
Query: 187 DLRKNLQARGSDLVVRVGK-----PETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEA 241
+L K L A L++R PE VL L + + ++ ++E +E + ++ ++
Sbjct: 57 ELEKALGALNVPLLIREADTWDQAPE-VLSTLCTQLKIEGLHLNQEYGINETRRDQAVQK 115
Query: 242 AMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTI-EALDQLKGL 300
A++ G++V T Y LD L FK G + T G + + + +K + Q
Sbjct: 116 ALEKAGVQV------TSY-LDQLLFKPGSILTKTGNYFQVF--TQFKKVCYNRMHQAMPQ 166
Query: 301 PSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPK 360
P R + D Q + K + GE EA +R+ FA + Q K
Sbjct: 167 PVRTPKAQQSLSIKSDSIPDQVEGFATPSKALRDLWPAGEAEARRRMATFA-DAQISYYK 225
Query: 361 GNKDGNHDSIYGANFSCKISPWLAMGCLSPR 391
+D + G + ++S +LA G +SPR
Sbjct: 226 TERD--FPAKPGTS---QLSAYLAAGVISPR 251
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 166 (63.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 63/244 (25%), Positives = 113/244 (46%)
Query: 127 IVWFRNDLRVHDNESLNTANNESVSVL-PVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
I WFR DLR+HD+ +L A + +VL P++ +DP +S G + R +L++
Sbjct: 7 IYWFRTDLRLHDSPALQAALDLDPAVLWPIFTWDPHYVYRSRGGLN-----RWQYLLDCQ 61
Query: 186 SDLRK---NLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAA 242
+DL NL R V+R P+++ +L KA + ++ + +E ++ A
Sbjct: 62 NDLSASITNLNPRSKLFVLREA-PQSLFPKLFKAWKVTHLVFEKDTDAYARQRDEVVKKA 120
Query: 243 MKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLPS 302
+ G++V +G TL+ D + G PT R + G ++ + K LP
Sbjct: 121 AQAAGVKVITRYGRTLWDSDAIVKANGGEPT-MSMARLRTVGAKVGSIPRPIPAPKALPD 179
Query: 303 RGDVEPGDIP-SLLDLGLSQSAAM-SQGGKPAANSMKGGETE-ALQRLKKFAAEYQAQPP 359
G++ P D L D+G +A S+G + A ++ G + A++ L++ P
Sbjct: 180 PGEM-PLDFNLDLPDVGQDYNAKWRSEGKEKAYGAIAGPNGDFAIETLEELGYPPATTPY 238
Query: 360 KGNK 363
KG +
Sbjct: 239 KGGE 242
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 78/284 (27%), Positives = 129/284 (45%)
Query: 125 ASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIES 184
+S+ WFR LR+HDN +L A + V VY DP SS G ++ Y ++
Sbjct: 40 SSVHWFRKGLRLHDNPALLAAVRGAHCVRCVYILDPWFAASSSVGINRWRRY-----VKQ 94
Query: 185 VSDLRKNLQARGSDLVVRVGK-PETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAM 243
++++ + + S +V K P + + + G + + + + I
Sbjct: 95 GVEIKETVLRKTSGNLVSCWKVPSSDSLP-QQEWGVTRLTFEYDSEPFGKERDTAIMKMA 153
Query: 244 KDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTIEAL--DQLKG 299
K+ G+EV TLY LD + G+ P Y F+ + +E+ RK + ++ Q++G
Sbjct: 154 KEAGVEVVTENSHTLYDLDKIIELNGQKPPLTYKRFQAIISRMELPRKPVGSVTSQQMEG 213
Query: 300 LPSRGDV-EPGD----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEY 354
R ++ E D +PSL +LG ++G PA +GGETEAL RL K E
Sbjct: 214 C--RAEIQESHDETYGVPSLEELGFP-----TEGLGPAV--WQGGETEALARLDKHL-ER 263
Query: 355 QAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDEL 397
+A + N +S+ + +SP+L GCLS R + L
Sbjct: 264 KAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYRL 305
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 84/337 (24%), Positives = 147/337 (43%)
Query: 121 AIRRASIVWFRNDLRVHDNESLNTA---NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYR 177
A R A+++WFR+ LR+HDN +L A ++ ++++PV+ FD G + G++ R
Sbjct: 2 ATRGANVIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKNVGYN-----R 56
Query: 178 ASFLIESVSDLRKNLQA----RGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
FL++S+ D+ LQA RG L+V G+P + L + + + ++
Sbjct: 57 MRFLLDSLQDIDDQLQAATDGRGR-LLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWN 115
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKL--GEMPTNYGGFREKVK--GVEIRK 289
+ +E I + ++ I+ TL+ L + G P Y F V+ G+ R
Sbjct: 116 ERDESIRSLCRELNIDFVEKVSHTLWD-PQLVIETNGGIPPLTYQMFLHTVQIIGLPPRP 174
Query: 290 TIEALDQLKGLPSRGDVEPGDIPSLL---DLGLSQSAAM--SQGGKPAANSMKGGETEAL 344
T +A +L+ + +++P SL L + + G A + +GGET+AL
Sbjct: 175 TADA--RLEDA-TFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGETQAL 231
Query: 345 ----QRLK--KFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELK 398
+RLK + A E P HDS +S L GCLS R + +
Sbjct: 232 LLLDERLKVEQHAFERGFYLPNQALPNIHDS------PKSMSAHLRFGCLSVRRFYWSVH 285
Query: 399 KTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
++ + G G + +L+WR++F
Sbjct: 286 DLFKNVQLRACVR----GVQMTGGAHITGQLIWREYF 318
>TAIR|locus:2122654 [details] [associations]
symbol:AT4G25290 species:3702 "Arabidopsis thaliana"
[GO:0003913 "DNA photolyase activity" evidence=IEA;ISS] [GO:0006281
"DNA repair" evidence=IEA;ISS] InterPro:IPR006050
InterPro:IPR000073 Pfam:PF00875 EMBL:CP002687 GO:GO:0006281
PRINTS:PR00111 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 IPI:IPI00518108 RefSeq:NP_194259.4 UniGene:At.44762
ProteinModelPortal:F4JSJ6 SMR:F4JSJ6 PRIDE:F4JSJ6
EnsemblPlants:AT4G25290.1 GeneID:828632 KEGG:ath:AT4G25290
OMA:VHGFGAF Uniprot:F4JSJ6
Length = 692
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 52/197 (26%), Positives = 97/197 (49%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
++VWF++DLRV D+ L A+ +V+P+Y D R + ++ I ++
Sbjct: 37 AVVWFKHDLRVDDHPGLLAASKHR-AVIPLYVLDRRILSRYTTD-------TLELAIIAL 88
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHD--EVKS--EEKIEA 241
DLRK L+ +GS+L++R G E V+ +L K + A V+ EV + EV + K+E
Sbjct: 89 EDLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAVKNKLEG 148
Query: 242 -AMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGL 300
++ E + W + Y +L ++P ++ E+ K +++ T+
Sbjct: 149 VSLSGESPRI-VAWRTPFYESQNLT----DLPQSW----EEFKKLKLPLTLPVPAAKFSS 199
Query: 301 PSRGDVEPGDIPSLLDL 317
P +++ G +P+L DL
Sbjct: 200 PG-SELQWGSVPTLDDL 215
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 84/331 (25%), Positives = 143/331 (43%)
Query: 123 RRASIVWFRNDLRVHDNESLNTA---NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRAS 179
R A+++WFR+ LR+HDN +L A ++ + ++PV+ FD G S G++ R
Sbjct: 4 RGANVLWFRHGLRLHDNPALLAALEEKDQGIPLIPVFIFDGESAGTKSVGYN-----RMR 58
Query: 180 FLIESVSDLRKNLQA----RGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKS 235
FL++S+ DL + LQ+ RG L V G+P + L + + + A + +
Sbjct: 59 FLLDSLQDLDEQLQSATEGRGR-LFVFEGEPTLIFRRLHEQVRLHKICAELDCEPIWNER 117
Query: 236 EEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKL--GEMPTNYGGFREKVK--GVEIRKTI 291
+E ++ GIE TL+ L + G P Y F V+ GV R I
Sbjct: 118 DESARLLCRELGIEYVEKVSHTLWD-PRLVIETNGGIPPLTYQMFLHTVQIIGVPPRPAI 176
Query: 292 EA-LDQLKGLPSRGDVEP--G---DIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQ 345
+A ++ + ++ G +P+ + S M G A + +GGET+AL
Sbjct: 177 DAHINDATFIQLAPELRQHLGCFDQVPNPEHFNI-YSDNM---GFLAKINWRGGETQALA 232
Query: 346 RLK-KFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSI 404
L+ + E A +G N + +S L GCLS R + + ++
Sbjct: 233 LLEERLKVERNAFE-RGYYLPNQANPNIQEAPKSMSAHLRFGCLSVRRFYWSVHDLFENV 291
Query: 405 SAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
A+ G GA + +L+WR++F
Sbjct: 292 QLAACVR-GVQIEGGAH---ITGQLIWREYF 318
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 75/270 (27%), Positives = 116/270 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 6 GINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYDSEPFGK 65
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G P Y F+ + +E+ +K +
Sbjct: 66 ERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAIISRMELPKKPV 125
Query: 292 EALDQLKGLPSRGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQR 346
++ + + D++ +PSL +LG + G PA +GGETEAL R
Sbjct: 126 SSIVSQQMETCKVDIQENHDDVYGVPSLEELGFP-----TDGLAPAV--WQGGETEALAR 178
Query: 347 LKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSIS 405
L K E +A + N +S+ + +SP+L GCLS R + L + +
Sbjct: 179 LDKHL-ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYHLWELYKKV- 234
Query: 406 AASKWNDGESGSSGAGSNWLMFELLWRDFF 435
K N S L +LLWR+FF
Sbjct: 235 ---KRNSTPPLS-------LYGQLLWREFF 254
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 75/270 (27%), Positives = 116/270 (42%)
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEV 233
G R FL++S+ DL +L+ S L V G+P V L K G + +
Sbjct: 12 GINRWRFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFKEWGVTRLTFEYDSEPFGK 71
Query: 234 KSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEI-RKTI 291
+ + I K+ G+EV TLY LD + G P Y F+ + +E+ +K +
Sbjct: 72 ERDAAIIKLAKEAGVEVVIENSHTLYDLDRIIELNGNKPPLTYKRFQAIISRMELPKKPV 131
Query: 292 EALDQLKGLPSRGDVEPGD-----IPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQR 346
++ + + D++ +PSL +LG + G PA +GGETEAL R
Sbjct: 132 SSIVSQQMETCKVDIQENHDDVYGVPSLEELGFP-----TDGLAPAV--WQGGETEALAR 184
Query: 347 LKKFAAEYQAQPPKGNKDG-NHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSIS 405
L K E +A + N +S+ + +SP+L GCLS R + L + +
Sbjct: 185 LDKHL-ERKAWVANYERPRMNANSLLASPTG--LSPYLRFGCLSCRLFYYHLWELYKKV- 240
Query: 406 AASKWNDGESGSSGAGSNWLMFELLWRDFF 435
K N S L +LLWR+FF
Sbjct: 241 ---KRNSTPPLS-------LYGQLLWREFF 260
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 71/291 (24%), Positives = 131/291 (45%)
Query: 127 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVS 186
IV F+ D R++DN +L A +S V+PVY D S+S + +L ++
Sbjct: 6 IVMFQKDFRLYDNPALFEAA-QSGEVVPVYVHDETFSMGSASKW---------WLHHAII 55
Query: 187 DLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDE 246
D++K L+A GS L++R G + ++ L + +G AVY + D ++S +K++ ++ +
Sbjct: 56 DVKKQLEALGSTLIIRKGSTQEEILSLVEQLGITAVYWNICYDPDRLQSNQKMKMMLEHK 115
Query: 247 GIEVKYFWGSTLYH------LDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGL 300
G+ K F L D+ +K+ Y F+++V I K I + +KG
Sbjct: 116 GMICKEFNSHLLLEPWVIKKKDNTEYKV--FTPFYNAFQKQV----IHKPISKVQSIKG- 168
Query: 301 PSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPK 360
G+ P + S+ +L L + + + + G A + K+F + A +
Sbjct: 169 ---GNSLPVSL-SVSELHLLPTIPWTSHMESIWEPTEEG---AYKTWKEFFSSKLASYSE 221
Query: 361 GNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDEL--KKTATSISAASK 409
G N N ++P+L+ G +S + ++ L K T + S K
Sbjct: 222 GRDFPNQ------NAHSMLAPYLSFGQISVKLIYHYLINKSTESQCSLFEK 266
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 82/335 (24%), Positives = 142/335 (42%)
Query: 126 SIVWFRNDLRVHDNESLNTA--------NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYR 177
+I+WFR+ LR+HDN SL A ++E+V + P++ FD G G++ R
Sbjct: 5 NILWFRHGLRLHDNPSLLEALKSDCVNQSSEAVKLFPIFIFDGESAGTRIVGYN-----R 59
Query: 178 ASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEE 237
FL+ES++DL + + G L+V G TVL L + + + ++ + ++
Sbjct: 60 MKFLLESLADLDRQFRDLGGQLLVFRGDSVTVLRRLFEELNIKKLCYEQDCEPIWKERDD 119
Query: 238 KIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIEALDQ 296
+ + + TL++ ++ G++P Y F V I +
Sbjct: 120 AVAKLCRTMDVRCVENVSHTLWNPIEVIQTNGDIPPLTYQMFLHTVN------IIGDPPR 173
Query: 297 LKGLPSRGDVEPGDIPSLL--DLGLSQSA-AMSQGG-------KPAANSMKGGETEALQR 346
G P+ VE G +P+LL +L L Q A G + A GGET AL+
Sbjct: 174 PVGAPNFEYVEFGRVPALLASELKLCQQMPAPDDFGIHYDGNARIAFQKWIGGETRALEA 233
Query: 347 LKKFAAEYQAQPPKGNKDGNH------DSIYGANFSCKISPWLAMGCLSPRSMFDELKKT 400
L A + Q + ++G + I G S +S L GCLS R + +
Sbjct: 234 L---GARLK-QEEEAFREGYYLPTQAKPEILGPATS--MSAALRFGCLSVRMFYWCVHDL 287
Query: 401 ATSISAASKWNDGESGSSGAGSNWLMFELLWRDFF 435
+ + S++ G + + +L+WR++F
Sbjct: 288 FAKVQSNSQFKY-------PGGHHITGQLIWREYF 315
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 112 (44.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 127 IVWFRNDLRVHDNESLNTA-NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
+VWFR DLR+HDN +L A N S VL +Y PR + + P +A + +
Sbjct: 5 LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMS-----PRQAELINAQL 59
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHD-EVKSEEK---IEA 241
+ L+ L +G L+ R VE+ K + A+ H ++ EV + +E
Sbjct: 60 NGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVER 119
Query: 242 AMKD 245
A+++
Sbjct: 120 ALRN 123
Score = 71 (30.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 378 KISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFR 436
++S LA G LSPR L ++ + DG GAGS WL EL+WR+F+R
Sbjct: 237 RLSASLATGGLSPRQCLHRL------LAEQPQALDG-----GAGSVWLN-ELIWREFYR 283
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 81/328 (24%), Positives = 136/328 (41%)
Query: 126 SIVWFRNDLRVHDNESLNTA------NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRAS 179
+I+WFR+ LR+HDN SL A +ESV + P++ FD G GF+ R
Sbjct: 5 NILWFRHGLRLHDNPSLLEALRNDGTGSESVRLYPIFIFDGESAGTKLVGFN-----RMK 59
Query: 180 FLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKI 239
FL+ES++DL + L+ G L V G V+ L + + + ++ ++ I
Sbjct: 60 FLLESLADLDRQLREIGGQLYVFKGNAVNVMRRLFEELNIRKLCFEQDCEPIWKARDDAI 119
Query: 240 EAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPT-NYGGFREKVKGVEIRKTIEALDQLK 298
+ + ++ TL+ + G +P Y F + V+I I +
Sbjct: 120 QNLCRMMDVKCVEKVSHTLWDPQQIIRTNGGIPPLTYQMF---LHTVDI---IGKPPRPV 173
Query: 299 GLPSRGDVEPGDIPSLL--DLGLSQSAAMSQ---G----GKPAANSMK--GGETEALQRL 347
PS VE G IPS+L ++ L Q +S G G P + + GGET+AL+ L
Sbjct: 174 AAPSFEFVEFGSIPSILAQEVKLQQVRNLSPEDFGIYYEGNPDISHQQWMGGETKALECL 233
Query: 348 KKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAA 407
+ + G +S L GCLS R + + + A
Sbjct: 234 GHRLKQEEEAFLGGYFLPTQAKPEFLVPPTSMSAALRFGCLSVRMFYWCVHDLYEKVQAN 293
Query: 408 SKWNDGESGSSGAGSNWLMFELLWRDFF 435
+++ + G + +L+WR++F
Sbjct: 294 NQYRN-------PGGQHITGQLIWREYF 314
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 111 (44.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 34/140 (24%), Positives = 61/140 (43%)
Query: 118 NGAAIRRASIVWFRNDLRVHDNESLN----TANNESVSVLPVYCFDPRDYGKSSSGFDKT 173
N A + WF++DLR+HDN +L A + ++ +Y P D S
Sbjct: 69 NAMTANAAVVHWFKSDLRLHDNRALQMAYRVAREHKIPLIGLYILSPEDLTAHLSS---- 124
Query: 174 GPYRASFLIESVSDLRKNLQARGSDLVV-----RVGKPETVLVELAKAIGADAVYAHREV 228
P R + ++ L+++L L + R P + + L + GA+ ++A+ E
Sbjct: 125 -PARVDLTLRTLEQLKRDLGELDVPLYMETQACRKDIPRRI-INLCQEWGANHLFANLEY 182
Query: 229 SHDEVKSEEKIEAAMKDEGI 248
DE++ E K+ + GI
Sbjct: 183 EVDELRREAKLIRLCAENGI 202
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 364 DGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGS- 422
D + + G S K+SP+ A G LS R T+++ A + N G+ AG
Sbjct: 316 DDERNFLSGETTS-KLSPYFASGSLSAR----------TAVAKAREANAGKISRGEAGYI 364
Query: 423 NWLMFELLWRDFFR 436
+W+ E+ WRDF++
Sbjct: 365 SWIS-EVAWRDFYK 377
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 339 GETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELK 398
GE E L+RL++F + A D + + G S K+SP+ A G LS R+ + +
Sbjct: 297 GEHEGLRRLEEFLEKATAY------DDERNFLSGETTS-KLSPYFASGSLSARTAVAKAR 349
Query: 399 KTATSISAASKWNDGESG 416
+ + A K + GE+G
Sbjct: 350 E-----ANAGKISRGEAG 362
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 115 (45.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 127 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVS 186
+VWFR DLR DN +L A N V +Y P + + P +A + ++
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHH-----LAPIQADLIWRRLA 57
Query: 187 DLRKNLQARGSDLVVR-VGKPETVLV---ELAKAIGADAVYAHREVSHDEVKSEEKIEAA 242
+L++ L A L + V + V +LAK + A V A+R+ DE + ++ +
Sbjct: 58 ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117
Query: 243 MKDEGI 248
+ ++GI
Sbjct: 118 LSEQGI 123
Score = 59 (25.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 379 ISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFR 436
+SP+LA+G LS R L ++ GE S GA WL EL+WR+F++
Sbjct: 239 LSPYLAIGVLSARQCVARLYHESSM---------GEL-SEGA-QVWLS-ELIWREFYQ 284
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 115 (45.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 127 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVS 186
+VWFR DLR DN +L A N V +Y P + + P +A + ++
Sbjct: 3 LVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHH-----LAPIQADLIWRRLA 57
Query: 187 DLRKNLQARGSDLVVR-VGKPETVLV---ELAKAIGADAVYAHREVSHDEVKSEEKIEAA 242
+L++ L A L + V + V +LAK + A V A+R+ DE + ++ +
Sbjct: 58 ELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLANRDYELDEQQRDQLAQQL 117
Query: 243 MKDEGI 248
+ ++GI
Sbjct: 118 LSEQGI 123
Score = 59 (25.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 379 ISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFR 436
+SP+LA+G LS R L ++ GE S GA WL EL+WR+F++
Sbjct: 239 LSPYLAIGVLSARQCVARLYHESSM---------GEL-SEGA-QVWLS-ELIWREFYQ 284
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 39/165 (23%), Positives = 77/165 (46%)
Query: 118 NGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYR 177
+G SIVWFR DLRV DN +L A V+ ++ + P + G G + +
Sbjct: 6 SGCGSGGCSIVWFRRDLRVEDNPALAAAVRAG-PVIALFVWAPEEEGHYHPG--RVSRW- 61
Query: 178 ASFLIESVSDLRKNLQARGSDLVVRVGKPETV-LVELAKAIGADAVYAHREVSHDEVKSE 236
+L S++ L +L++ G+ L+ + L+++ K+ GA ++ + + +
Sbjct: 62 --WLKNSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVRD 119
Query: 237 EKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREK 281
+ + + +GI V+ F LY ++ +LG + + F E+
Sbjct: 120 HRAKDVLTAQGIAVRSFNADLLYEPWEVTDELGRPFSMFAAFWER 164
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 40/169 (23%), Positives = 77/169 (45%)
Query: 126 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESV 185
+I WFR DLR+ DN +L A + ++P+Y D + G + +L S+
Sbjct: 3 TIFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ--------LKMLGDAQRWWLHHSL 54
Query: 186 SDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKD 245
S L+ L +G+ L+++ G + VL+EL K + +Y +R + + +E +
Sbjct: 55 SSLQTALSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPP 114
Query: 246 EGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKG-VEIRKTIEA 293
+E+ + + L + K G + F + + ++ RKT+ A
Sbjct: 115 LSVEI--YHSTLLTEPQKIKNKSGGYYKIFTPFWKHINASLQPRKTLAA 161
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 416 0.00081 118 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 615 (65 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.11u 0.11s 38.22t Elapsed: 00:00:01
Total cpu time: 38.13u 0.11s 38.24t Elapsed: 00:00:01
Start: Tue May 21 08:39:26 2013 End: Tue May 21 08:39:27 2013