BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013803
(436 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|G5CEW6|IF4G_WHEAT Eukaryotic translation initiation factor 4G OS=Triticum aestivum PE=1
SV=1
Length = 1488
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/276 (77%), Positives = 241/276 (87%), Gaps = 3/276 (1%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ + + +L NF KLFEQVK VNIDN TL GV+SQIFDKALMEPTFCEMYANF L
Sbjct: 885 QLKAILNKLTPQNFDKLFEQVKEVNIDNVSTLTGVISQIFDKALMEPTFCEMYANFCSHL 944
Query: 197 AGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIK 256
AG LPDFSEDNEKITFKRLLLNKCQEEFERGERE+ EA+K ++EGEIKQT+EEREEKR+K
Sbjct: 945 AGALPDFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRVK 1004
Query: 257 ARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMID 316
ARRR LGNIRLIGELYKK+MLTERIMHECIKKLLG Y+NPDEE++EALC LMSTIGEMID
Sbjct: 1005 ARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMID 1064
Query: 317 HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHR 376
HPKAKEHMDAYFDRM LS + +SSRVR +L+DSI+LRKNKWQQRRKV+GPKKI+EVHR
Sbjct: 1065 HPKAKEHMDAYFDRMRNLSTSQLISSRVRFLLRDSIDLRKNKWQQRRKVDGPKKIDEVHR 1124
Query: 377 DAAQERQAQASRLARGPSMNSSSRR-AP-MDFGPRG 410
DAAQER AQ+SR +RGP ++S RR AP MD+G RG
Sbjct: 1125 DAAQERHAQSSR-SRGPVVSSLPRRGAPSMDYGSRG 1159
>sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp.
japonica GN=Os07g0555200 PE=2 SV=2
Length = 1792
Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats.
Identities = 217/271 (80%), Positives = 241/271 (88%), Gaps = 2/271 (0%)
Query: 142 IGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELP 201
+ +L NF+KLFE+VK VNIDN TL GV+SQIFDKALMEPTFCEMYANF + LAG LP
Sbjct: 1190 LNKLTPQNFEKLFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALP 1249
Query: 202 DFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRW 261
DFSEDNEKITFKRLLLNKCQEEFERGERE+ EA+K ++EGEIKQT+EEREEKRI+ARRR
Sbjct: 1250 DFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRRM 1309
Query: 262 LGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAK 321
LGNIRLIGELYKK+MLTERIMHECIKKLLG Y+NPDEE++EALC LMSTIGEMIDH KAK
Sbjct: 1310 LGNIRLIGELYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMIDHAKAK 1369
Query: 322 EHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQE 381
EHMDAYFD M KLS + +LSSRVR ML+DSI+LRKNKWQQRRKVEGPKKI+EVHRDAAQE
Sbjct: 1370 EHMDAYFDIMLKLSTSQQLSSRVRFMLRDSIDLRKNKWQQRRKVEGPKKIDEVHRDAAQE 1429
Query: 382 RQAQASRLARGPSMNSSSRR--APMDFGPRG 410
R AQ+SRLARG + S RR APMD+GPRG
Sbjct: 1430 RHAQSSRLARGSVVGSGPRRGAAPMDYGPRG 1460
>sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana
GN=EIF4G PE=1 SV=2
Length = 1727
Score = 359 bits (921), Expect = 3e-98, Method: Composition-based stats.
Identities = 196/270 (72%), Positives = 235/270 (87%), Gaps = 1/270 (0%)
Query: 142 IGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELP 201
+ +L NF+KLFEQVK+VNIDNAVTL+GV+SQIFDKALMEPTFCEMYA+F + L+G LP
Sbjct: 1103 LNKLTPQNFEKLFEQVKSVNIDNAVTLSGVISQIFDKALMEPTFCEMYADFCFHLSGALP 1162
Query: 202 DFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRW 261
DF+E+ EKITFKRLLLNKCQEEFERGE+E+EEA++ +EG+++QTEEEREEKR++ RRR
Sbjct: 1163 DFNENGEKITFKRLLLNKCQEEFERGEKEEEEASRVAEEGQVEQTEEEREEKRLQVRRRM 1222
Query: 262 LGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAK 321
LGNIRLIGELYKK+MLTE+IMH CI+KLLG ++P EE++EALC LMSTIG MIDH KAK
Sbjct: 1223 LGNIRLIGELYKKRMLTEKIMHACIQKLLGYNQDPHEENIEALCKLMSTIGVMIDHNKAK 1282
Query: 322 EHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQE 381
MD YF++M+ LS +LSSRVR ML ++I+LRKNKWQ+R KVEGPKKIEEVHRDAAQE
Sbjct: 1283 FQMDGYFEKMKMLSCKQELSSRVRFMLINAIDLRKNKWQERMKVEGPKKIEEVHRDAAQE 1342
Query: 382 RQAQASRLARGPSMNSSSRRAPMDF-GPRG 410
RQ QA+RL+RGPSMNSS RR M+F PRG
Sbjct: 1343 RQTQANRLSRGPSMNSSGRRGHMEFSSPRG 1372
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 177/295 (60%), Gaps = 23/295 (7%)
Query: 138 CRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFF-YFL 196
R + +L F++L +QV + ID L GV+ IF+KA+ EP F YAN +
Sbjct: 768 VRSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLM 827
Query: 197 AGELPDFSEDNEKITFKRLLLNKCQEEFERG----------EREQEEANKADKEGEIKQT 246
A ++P + + F++LLLN+CQ+EFE+ ++E +EA A++ G +K
Sbjct: 828 ALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRLK-- 885
Query: 247 EEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCI 306
EE EE R ARRR LGNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC
Sbjct: 886 -EELEEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCR 941
Query: 307 LMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVE 366
L++TIG+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR++ W RR +
Sbjct: 942 LLTTIGKDLDFAKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRQSNWVPRRGDQ 1001
Query: 367 GPKKIEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRGLSL--GTPIFN 419
GPK I+++H++A E + ++ + + S RR GP G + G P+ +
Sbjct: 1002 GPKTIDQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPINRGLPLVD 1052
>sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens
GN=EIF4G1 PE=1 SV=4
Length = 1599
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 177/295 (60%), Gaps = 23/295 (7%)
Query: 138 CRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFF-YFL 196
R + +L F++L +QV + ID L GV+ IF+KA+ EP F YAN +
Sbjct: 764 VRSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLM 823
Query: 197 AGELPDFSEDNEKITFKRLLLNKCQEEFERG----------EREQEEANKADKEGEIKQT 246
A ++P + + F++LLLN+CQ+EFE+ ++E +EA A++ G +K
Sbjct: 824 ALKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRLK-- 881
Query: 247 EEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCI 306
EE EE R ARRR LGNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC
Sbjct: 882 -EELEEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCR 937
Query: 307 LMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVE 366
L++TIG+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR + W RR +
Sbjct: 938 LLTTIGKDLDFEKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRGSNWVPRRGDQ 997
Query: 367 GPKKIEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRG--LSLGTPIFN 419
GPK I+++H++A E + ++ + + S RR GP G +S G P+ +
Sbjct: 998 GPKTIDQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPISRGLPLVD 1048
>sp|Q80XI3|IF4G3_MOUSE Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus
GN=Eif4g3 PE=1 SV=2
Length = 1579
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 157/253 (62%), Gaps = 11/253 (4%)
Query: 139 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAG 198
R + +L F +L +QV A+ +D L GV+ +F+KA+ EP+F YAN L
Sbjct: 754 RSILNKLTPQMFNQLMKQVSALTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVT 813
Query: 199 -ELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------- 250
++P + + F++LLLN+CQ+EFE+ + + + K KE E EER
Sbjct: 814 LKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDEL 873
Query: 251 EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMST 310
EE + KARRR +GNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++T
Sbjct: 874 EEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLTT 930
Query: 311 IGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKK 370
IG+ +D KAK MD YF++MEK+ K SSR+R ML+D I+LR W RR +GPK
Sbjct: 931 IGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPKT 990
Query: 371 IEEVHRDAAQERQ 383
IE++H++A E Q
Sbjct: 991 IEQIHKEAKIEEQ 1003
>sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens
GN=EIF4G3 PE=1 SV=2
Length = 1585
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 156/254 (61%), Gaps = 11/254 (4%)
Query: 138 CRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLA 197
R + +L F +L +QV + +D L GV+ +F+KA+ EP+F YAN L
Sbjct: 758 VRSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLV 817
Query: 198 G-ELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------ 250
++P + + F++LLLN+CQ+EFE+ + + + K KE E EER
Sbjct: 818 TLKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDE 877
Query: 251 -EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMS 309
EE + KARRR +GNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++
Sbjct: 878 LEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLT 934
Query: 310 TIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPK 369
TIG+ +D KAK MD YF++MEK+ K SSR+R ML+D I+LR W RR +GPK
Sbjct: 935 TIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPK 994
Query: 370 KIEEVHRDAAQERQ 383
IE++H++A E Q
Sbjct: 995 TIEQIHKEAKIEEQ 1008
>sp|Q6K641|IF4G2_ORYSJ Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza
sativa subsp. japonica GN=Os02g0611500 PE=2 SV=1
Length = 780
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 162/260 (62%), Gaps = 13/260 (5%)
Query: 125 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 184
LS + R LK +G + +L F L Q+ I A L V+S IF+KA++EPT
Sbjct: 201 LSNKERVLK---TVKGILNKLTPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPT 257
Query: 185 FCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFERGEREQEEANKADKEG 241
FC MYA + L +LP F + ++ITFKR+LLN CQE FE + + E NK
Sbjct: 258 FCPMYAQLCFDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGADNLRSEVNKLTG-- 315
Query: 242 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 299
+ Q E R+++R+ + R LGNIRL+GEL K+KM+ E+I+H +++LLG N P EE
Sbjct: 316 -LDQEMERRDKERL-VKLRTLGNIRLVGELLKQKMVPEKIVHHIVQELLGSESNRCPAEE 373
Query: 300 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 358
+VEA+C +TIG+ +D +PK++ D YF+R++ L+ N +L+SR+R M +D ++LR N+
Sbjct: 374 NVEAICQFFNTIGKQLDENPKSRRFNDVYFNRLKDLTTNSQLASRLRFMARDVLDLRSNQ 433
Query: 359 WQQRRKVEGPKKIEEVHRDA 378
W RR+ KKI E+HR+A
Sbjct: 434 WVPRREEMKAKKISEIHREA 453
>sp|Q84PB3|IF4G1_ORYSJ Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza
sativa subsp. japonica GN=Os04g0499300 PE=2 SV=2
Length = 793
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 18/291 (6%)
Query: 99 NHERNDKKHRNSRDKEIRSDNRGKRR---LSKRMRNLKWHIECRGDIGRLNAPNFKKLFE 155
NH+ K I+++ R LS++ R LK +G + +L F L
Sbjct: 172 NHQFASKAQVGPTPALIKAEVPWSARRGNLSEKDRVLK---TVKGILNKLTPEKFDLLKG 228
Query: 156 QVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSED---NEKITF 212
Q+ I A L V+S IF+KA+ EPTFC MYA L +LP F + ++ITF
Sbjct: 229 QLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITF 288
Query: 213 KRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY 272
KR+LLN CQE FE E + E K Q E R+++RI + R LGNIRLIGEL
Sbjct: 289 KRVLLNNCQEAFEGAESLRAEIAKLTGP---DQEMERRDKERI-VKLRTLGNIRLIGELL 344
Query: 273 KKKMLTERIMHECIKKLLGQYEN----PDEEDVEALCILMSTIGEMID-HPKAKEHMDAY 327
K+KM+ E+I+H +++LLG + P+EE+VEA+C +TIG+ +D +PK++ D Y
Sbjct: 345 KQKMVPEKIVHHIVQELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTY 404
Query: 328 FDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDA 378
F +M++L+ N++L+ R+R M++D ++LR N W RR+ K I E+H +A
Sbjct: 405 FIQMKELTTNLQLAPRLRFMVRDVVDLRSNNWVPRREEIKAKTISEIHDEA 455
>sp|O82233|IF4G2_ARATH Eukaryotic translation initiation factor isoform 4G-2
OS=Arabidopsis thaliana GN=EIF(ISO)4G2 PE=1 SV=1
Length = 747
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 150/247 (60%), Gaps = 10/247 (4%)
Query: 138 CRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLA 197
+G + +L ++ L Q+ I +A L V+ IF+ A+++PTFCEMYA + +
Sbjct: 178 VKGILNKLTPEKYELLKGQLIDAGITSADILKEVIQLIFENAILQPTFCEMYALLCFDIN 237
Query: 198 GELPDFSED---NEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKR 254
G+LP F + ++ITFKR+LLN CQE FE + +EE + + E ER +K
Sbjct: 238 GQLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAGKLKEEIRQMTNPDQ----EMERMDKE 293
Query: 255 IKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLG--QYENPDEEDVEALCILMSTIG 312
A+ R LGNIRLIGEL K+KM+ E+I+H +++LLG P E DVEALC TIG
Sbjct: 294 KMAKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGDDTKACPAEGDVEALCQFFITIG 353
Query: 313 EMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKI 371
+ +D P+++ D YF R+++L+ + +L R+R M+++ ++LR NKW RR+ KKI
Sbjct: 354 KQLDDSPRSRGINDTYFGRLKELARHPQLELRLRFMVQNVVDLRANKWVPRREEVKAKKI 413
Query: 372 EEVHRDA 378
E+H +A
Sbjct: 414 NEIHSEA 420
>sp|Q03387|IF4G1_WHEAT Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum
aestivum PE=1 SV=2
Length = 788
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 153/260 (58%), Gaps = 13/260 (5%)
Query: 125 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 184
LS++ R LK +G + +L F L Q+ I A L V+S IF+KA+ EPT
Sbjct: 204 LSEKDRVLK---TVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPT 260
Query: 185 FCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFERGEREQEEANKADKEG 241
FC MYA L LP F + ++ITFKR+LLN CQE FE + + E A G
Sbjct: 261 FCPMYAQLCSELNDNLPTFPSEEPGGKEITFKRVLLNNCQEAFEGADSLRVEI--ASLTG 318
Query: 242 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 299
Q E+R+++RI + R LGNIRLIGEL K+KM+ E+I+H +K+LLG + PDEE
Sbjct: 319 P-DQEMEKRDKERI-FKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGSDKKACPDEE 376
Query: 300 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 358
VEA+C +TIG+ +D +PK++ D YF ++ +L N +L+ R + M++D I+LR N
Sbjct: 377 HVEAICQFFNTIGKQLDENPKSRRINDTYFVQIRELVANPQLTPRSKFMVRDLIDLRSNN 436
Query: 359 WQQRRKVEGPKKIEEVHRDA 378
W RR K I E+H +A
Sbjct: 437 WVPRRAEIKAKTISEIHTEA 456
>sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1
OS=Arabidopsis thaliana GN=EIF(ISO)4G1 PE=1 SV=1
Length = 780
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 167/293 (56%), Gaps = 20/293 (6%)
Query: 125 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 184
LS+ R LK +G + +L + L Q+ I +A L GV++ IFDKA++EPT
Sbjct: 209 LSENDRVLK---TVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPT 265
Query: 185 FCEMYANFFYFLAGELPDF--SEDNEK-ITFKRLLLNKCQEEFERGEREQEEANKADKEG 241
FC MYA + +LP F +E +K ITFKR+LLN CQE FE + +EE +
Sbjct: 266 FCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREELRQMSAPD 325
Query: 242 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 299
+ E ER +K + + LGNIRLIGEL K+KM+ E+I+H +++LLG E P EE
Sbjct: 326 Q----EAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKVCPAEE 381
Query: 300 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 358
+VEA+C TIG+ +D + K+K D YF R++ LS N +L R+R M+++ I++R N
Sbjct: 382 NVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQALSKNPQLELRLRFMVQNIIDMRSNG 441
Query: 359 WQQRRKVEGPKKIEEVHRDAAQE---RQAQASRLARGPSMNSSSRRAPMDFGP 408
W RR+ + I E+H +A + R + + RG M SS P+ GP
Sbjct: 442 WVPRREEMKARTITEIHTEAEKNLGLRPGATANMRRG--MVSSG--GPVSPGP 490
>sp|Q41583|IF4G2_WHEAT Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum
aestivum PE=2 SV=1
Length = 787
Score = 168 bits (426), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 152/260 (58%), Gaps = 13/260 (5%)
Query: 125 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 184
LS++ R LK +G + +L F L ++ I A L V+S IF+KA+ EPT
Sbjct: 203 LSEKDRVLK---TVKGILNKLTPEKFDLLKGELLDSGITTADILKDVISLIFEKAVFEPT 259
Query: 185 FCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFERGEREQEEANKADKEG 241
FC MYA L LP F + ++ITFKR+LLN CQE FE + + E A G
Sbjct: 260 FCPMYAQLCSELNDNLPKFPSEEPGGKEITFKRVLLNNCQEAFEGADSLRVEI--ASLTG 317
Query: 242 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 299
Q E+R+++RI + R LGNIRLIGEL K+KM+ E+I+H +K+LLG + PDEE
Sbjct: 318 P-DQEMEKRDKERI-FKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGSDKKACPDEE 375
Query: 300 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 358
VEA+C +TIG+ +D +PK++ D YF + +L N +L+ R + M++D I+LR N
Sbjct: 376 HVEAICQFFNTIGKQLDENPKSRRINDTYFVHLRELVANPQLTPRSKFMVRDLIDLRSNN 435
Query: 359 WQQRRKVEGPKKIEEVHRDA 378
W RR K I E+H +A
Sbjct: 436 WVPRRAEIKAKTISEIHTEA 455
>sp|P41110|IF4G1_RABIT Eukaryotic translation initiation factor 4 gamma 1 OS=Oryctolagus
cuniculus GN=EIF4G1 PE=1 SV=1
Length = 1402
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 163/290 (56%), Gaps = 17/290 (5%)
Query: 139 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAG 198
R + +L F++L +QV + ID G ++ + PT +
Sbjct: 571 RSILNKLTPQMFQQLMKQVTQLAIDTEGASKGSLTSSLRRPFQNPTSQWPSQHVPLPHGA 630
Query: 199 ELPDFSEDNEKITFKRLLLNKCQEEFERG-------EREQEEANKADKEGEIKQTEEERE 251
E + + F++LLLN+CQ+EFE+ E++Q+E ++A E ++ +EE E
Sbjct: 631 ESATTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERERLKEELE 690
Query: 252 EKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTI 311
E R ARR LGNI+ IGEL+K KMLTE IMH+C+ KLL DEE +E LC L++TI
Sbjct: 691 EARDIARRCSLGNIKFIGELFKLKMLTEAIMHDCVVKLLRH----DEESLEFLCRLLTTI 746
Query: 312 GEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKI 371
G+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR++ W RR +GPK I
Sbjct: 747 GKDLDFEKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRQSNWVPRRGDQGPKTI 806
Query: 372 EEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRG--LSLGTPIFN 419
+++H++A E + ++ + + S RR GP G +S G P+ +
Sbjct: 807 DQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPISRGLPLVD 852
>sp|Q10475|IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif471 PE=1 SV=1
Length = 1403
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 156/274 (56%), Gaps = 23/274 (8%)
Query: 138 CRGDIGRLNAPNFKKLFEQVKAVNI-----DNAVTLAGVVSQIFDKALMEPTFCEMYANF 192
+G + ++ F K+ +Q+ + + ++ TL V+ F+KA EP F MYA F
Sbjct: 1012 VKGSLNKMTLEKFDKISDQILEIAMQSRKENDGRTLKQVIQLTFEKATDEPNFSNMYARF 1071
Query: 193 FYFLAGELPD-------FSEDNEKI----TFKRLLLNKCQEEFERGEREQEEANKADKEG 241
+ + D ++N+ + F++ LL++CQE+FERG + + KA E
Sbjct: 1072 ARKMMDSIDDSIRDEGVLDKNNQPVRGGLLFRKYLLSRCQEDFERGWKANLPSGKAG-EA 1130
Query: 242 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDV 301
EI ++E IK RR LG +R IGEL+K ML+E+IMHECIK+LLG +P+EE++
Sbjct: 1131 EI-MSDEYYVAAAIK--RRGLGLVRFIGELFKLSMLSEKIMHECIKRLLGNVTDPEEEEI 1187
Query: 302 EALCILMSTIGEMIDHP-KAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQ 360
E+LC L+ T+G ID K MD Y RME ++ L SR++ ML D ++ RKN W
Sbjct: 1188 ESLCRLLMTVGVNIDATEKGHAAMDVYVLRMETITKIPNLPSRIKFMLMDVMDSRKNGWA 1247
Query: 361 QRRKVE-GPKKIEEVHRDAAQERQ-AQASRLARG 392
+ +VE GPK I E+H +A +++ A++ R + G
Sbjct: 1248 VKNEVEKGPKTIAEIHEEAERKKALAESQRPSSG 1281
>sp|Q62448|IF4G2_MOUSE Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus
GN=Eif4g2 PE=1 SV=2
Length = 906
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 155/297 (52%), Gaps = 31/297 (10%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 197 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 248
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 249 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 304
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 305 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 364
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 365 V--EGPKKIEEVHRDAAQE---------RQAQASRLARGPSMNSSSRRAPMDFGPRG 410
GPK I ++ +DA ++ Q ++ GP M R MD P G
Sbjct: 315 FLDNGPKTINQIRQDAVKDLGVFIPAPMAQGRSDFFLEGPFMPP---RMKMDRDPLG 368
>sp|Q5R7J9|IF4G2_PONAB Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 197 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 248
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 249 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 304
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 305 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 364
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 365 V--EGPKKIEEVHRDAAQE 381
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens
GN=EIF4G2 PE=1 SV=1
Length = 907
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 197 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 248
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 249 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 304
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 305 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 364
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 365 V--EGPKKIEEVHRDAAQE 381
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|Q95L46|IF4G2_BOVIN Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 197 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 248
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 249 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 304
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 305 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 364
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 365 V--EGPKKIEEVHRDAAQE 381
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|P79398|IF4G2_RABIT Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus
cuniculus GN=EIF4G2 PE=2 SV=1
Length = 907
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 197 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 248
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 249 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 304
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLQDMGEDLECL 254
Query: 305 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 364
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 365 V--EGPKKIEEVHRDAAQE 381
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|C7G046|Y6969_DICDI von Willebrand factor A domain-containing protein DDB_G0286969
OS=Dictyostelium discoideum GN=DDB_G0286969 PE=4 SV=1
Length = 2079
Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 127/238 (53%), Gaps = 15/238 (6%)
Query: 141 DIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL 200
++ R+ + L + + + + + L + +F+KA+++ + +YA L
Sbjct: 1323 NLNRITMDTYSSLIKNIDELKVPDEEALKSISKILFEKAIIDQKYSAVYAILAGHLDTTF 1382
Query: 201 PDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRR 260
P F+E ++ KR +L+ CQ EF +K+ EG ++E+ EE+ +RR
Sbjct: 1383 PKFAE----LSLKRAILDNCQTEF------SAVVDKSKFEG---LSKEDLEEQEFIIKRR 1429
Query: 261 WLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENP-DEEDVEALCILMSTIGEMIDHPK 319
LGNI+ IGELYK +L E++ + +L+ + E DEE +E L +++TIG+ +D
Sbjct: 1430 VLGNIKFIGELYKHGVLGEKVAKAIVVQLITKCEERLDEESIEPLVKILNTIGKKLDEVD 1489
Query: 320 AKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRD 377
K + D YF ++ +SNN ++SR R +L D I+LR NKWQ + + K +E ++
Sbjct: 1490 -KANTDLYFSKVTNISNNPVVTSRGRFILLDLIDLRANKWQPKNSTQTKTKKDESDKE 1546
>sp|Q553R3|IF4G_DICDI Eukaryotic translation initiation factor 4 gamma OS=Dictyostelium
discoideum GN=eif4g PE=3 SV=1
Length = 1377
Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 45/279 (16%)
Query: 142 IGRLNAPNFKKLFEQVKAVNI-DNAVTLAGVVSQIFDKALMEPTFCEMYANF-------- 192
+ ++ F L E++ + I D+ G + IFDKAL E FC MY N
Sbjct: 777 LNKITPEKFDVLTEELLELGIVDDEKVHKGTIDLIFDKALNESKFCTMYTNLCKKIFEFE 836
Query: 193 ----------------------FYFLAGELPDF--SEDNEKITFKRLLLNKCQEEFERGE 228
++ ++ + D E N K F+ LLL+ CQ+E+E+
Sbjct: 837 KVKKEIAKRAVFEKIGVIETENYHKMSNKQRDEFDQEHNVKAVFRTLLLSTCQKEYEKIP 896
Query: 229 REQEEANKADKEGEIKQTEEER--EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 286
E DK E + EE+ EE + K R+R G I+ IGEL+K++ML+E+I+H +
Sbjct: 897 FE-----TVDKVPEDLKPEEKTDFEEGQFKERKRIFGLIKFIGELFKQQMLSEKIVHGIM 951
Query: 287 KKLLGQYENPDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMK-LSSRV 344
L+G+ + P E +E C L+S +G+ + + +A +++ +YF RM++L +N + LS R+
Sbjct: 952 VSLIGELQRPSEIKLECFCKLLSIVGKTLSQNEQASKYLTSYFQRMQQLVDNSQTLSQRI 1011
Query: 345 RLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQERQ 383
R ++++ ++L+ + W + E K ++EV +A Q +Q
Sbjct: 1012 RFLIQNVMDLKNSNWTLKVD-ESAKTLKEV--EATQNKQ 1047
>sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4631 PE=1
SV=2
Length = 952
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 18/255 (7%)
Query: 164 NAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL-PDFS-EDNEKITFKRLLLN--- 218
N TL V+ QIF KA EP + MYA + EL PD + E NE T +L+L+
Sbjct: 641 NGETLKAVIEQIFLKACDEPHWSSMYAQLCGKVVKELNPDITDETNEGKTGPKLVLHYLV 700
Query: 219 -KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKML 277
+C EF++G ++ N+ E + EE A+RR LG +R IG LY+ +L
Sbjct: 701 ARCHAEFDKGWTDKLPTNEDGTPLEPEMMSEEYYAA-ASAKRRGLGLVRFIGFLYRLNLL 759
Query: 278 TERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---------KAKEHMDAY 327
T ++M EC ++L+ ++P EE +E++ L++T+GE + + + +D+
Sbjct: 760 TGKMMFECFRRLMKDLTDSPSEETLESVVELLNTVGEQFETDSFRTGQATLEGSQLLDSL 819
Query: 328 FDRMEKLSNNMKLSSRVRLMLKDSIELRKNK-WQQRRKVEGPKKIEEVHRDAAQERQAQA 386
F ++ + K+SSR++ L D ELR +K W +K GPK I+++H + ++RQ +
Sbjct: 820 FGILDNIIQTAKISSRIKFKLIDIKELRHDKNWNSDKKDNGPKTIQQIHEEEERQRQLKN 879
Query: 387 SRLARGPSMNSSSRR 401
+ + N+SS R
Sbjct: 880 NSRSNSRRTNNSSNR 894
>sp|P39936|IF4F2_YEAST Eukaryotic initiation factor 4F subunit p130 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4632 PE=1
SV=1
Length = 914
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 133/245 (54%), Gaps = 22/245 (8%)
Query: 163 DNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL-PDFSE-DNEKITFKRLLLN-- 218
D+ TL V+ QIF KA EP + MYA + +L P+ + +NE +L+L+
Sbjct: 600 DDGETLKIVIEQIFHKACDEPHWSSMYAQLCGKVVKDLDPNIKDKENEGKNGPKLVLHYL 659
Query: 219 --KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKA--RRRWLGNIRLIGELYKK 274
+C EEFE+G ++ A + +G + E +E I A +RR LG +R IG LY
Sbjct: 660 VARCHEEFEKGWADKLPAGE---DGNPLEPEMMSDEYYIAAAAKRRGLGLVRFIGYLYCL 716
Query: 275 KMLTERIMHECIKKLLGQYEN-PDEEDVEALCILMSTIGEMIDH-----PKAKEH----M 324
+LT ++M EC ++L+ N P EE +E++ L++T+GE +H P+A +
Sbjct: 717 NLLTGKMMFECFRRLMKDLNNDPSEETLESVIELLNTVGEQFEHDKFVTPQATLEGSVLL 776
Query: 325 DAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK-WQQRRKVEGPKKIEEVHRDAAQERQ 383
D F ++ + + +S+R++ L D ELR+ K W +K GPK I+++H++ Q RQ
Sbjct: 777 DNLFMLLQHIIDGGTISNRIKFKLIDVKELREIKHWNSAKKDAGPKTIQQIHQEEEQLRQ 836
Query: 384 AQASR 388
+ S+
Sbjct: 837 KKNSQ 841
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 156 QVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSE---DNEKITF 212
Q+ I +A L V++ IF+K + EP FC YA +L L F D E+ITF
Sbjct: 405 QLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITF 464
Query: 213 KRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY 272
K+ L NKCQE FE E K G+ ++ E+ +E+ +K LGNI I L
Sbjct: 465 KQALSNKCQEIFESAHTVCSEIGKLI--GQDREMEQRDKERVVKLET--LGNINFIRALL 520
Query: 273 KKKMLTERIMHECIKKLL 290
KKK++T +I+ ++ ++
Sbjct: 521 KKKLITNKIIDHIVQAVM 538
>sp|Q8SVP8|IF4G_ENCCU Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=EIF4G PE=3
SV=1
Length = 627
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 137 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 196
+ R + RL A N + + +KA+ + + + +FDKA+ EPTF + YA L
Sbjct: 205 QARLEFNRLTAKNIGLVIKNLKAIRVGTIEEMKEIAKILFDKAISEPTFVKYYALLVLDL 264
Query: 197 AGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------ 250
E E IT + E ++ ++ ++ E+ + EER
Sbjct: 265 KKEWQSEEEKTRDITQTVFFGTLLTLTLKTLENKERWGDEYERRKEM--SFEERMAYEEK 322
Query: 251 ----EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCI 306
E +R +RR LG I + LY +++ M+ CI L+ D E+VE LC
Sbjct: 323 LEEAETERYIKKRRTLGTIDFLSSLYSLNVISYVHMNACINTLMKL---DDSENVEVLCY 379
Query: 307 LMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVE 366
L+ IGE + KEH+ + N ++R+R M++ ++ +++ W+ R
Sbjct: 380 LIENIGEKL-VVSGKEHIISMVCSSLAQKKN-SYTNRIRYMIESLLD-KRSSWKPREAKA 436
Query: 367 G 367
G
Sbjct: 437 G 437
>sp|Q7ZYB4|PAIP1_XENLA Polyadenylate-binding protein-interacting protein 1 OS=Xenopus
laevis GN=paip1 PE=1 SV=1
Length = 463
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 39/214 (18%)
Query: 162 IDNAVT----LAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLL 217
++N VT L +V I+ +A+ P F A +L+ L + N+ F++LLL
Sbjct: 173 LNNCVTTDESLQELVELIYQQAISVPNFSYTGARLCNYLSNNL-HINPQNQN--FRQLLL 229
Query: 218 NKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY----- 272
+CQ EFE+ +++A K D AR+++ + +GELY
Sbjct: 230 KRCQTEFEK----RDQAAKGDG----------------AARKQFHAFVLFLGELYLNLEI 269
Query: 273 ---KKKMLTERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMD 325
K ++ I+ +++LL + NP ++++ L+ G +++ KA M+
Sbjct: 270 KGAKGQVTRAEILQSGLQELLNSLFSNPVDDNLMCAVKLLKLTGSVLEDAWKEKALSCME 329
Query: 326 AYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKW 359
RM+ + + S V+ ML +ELR + W
Sbjct: 330 EVMLRMKNVVLDANCSRDVKQMLLKLVELRSSNW 363
>sp|C4V8K5|IF4G_NOSCE Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Nosema ceranae (strain BRL01) GN=EIF4G PE=3 SV=1
Length = 598
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 141 DIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL 200
++ +L N K++ +K +NI+ + + I KA+ EP +C +YA + G L
Sbjct: 215 ELNKLTNTNIKRIITNLKNLNIETIQQAKYLGNLIVFKAINEPQYCNLYA----MVVGAL 270
Query: 201 -PDFSEDNE------KITFKRLLLNKC----QEEFERGEREQEEANKADKEGEIKQTEEE 249
DF E + F +L +E+ E + + + N E ++ EE
Sbjct: 271 KKDFKSKEELGLHKKQTAFFGTVLTSAMKVLEEKVEWADTKVLDKNLYKNAFEYERAFEE 330
Query: 250 REEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN-PDEEDVEALCILM 308
+E +R +++ LG + L+ +LY ++T + H I+ L ++ N +EE VE L +
Sbjct: 331 QETERYLRKKKTLGAVNLLCDLYNLDVIT--LKH--IQSRLNEFLNIENEEVVEVLGKFI 386
Query: 309 STIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQ 361
IGE + ++ + ++ N K S+RV+ + D ++ +KN W++
Sbjct: 387 EKIGEKMYLNDKSDYANMICSYLDACKN--KYSNRVKFYIMDVLDKKKN-WKK 436
>sp|Q8VE62|PAIP1_MOUSE Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus
GN=Paip1 PE=2 SV=1
Length = 400
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 160 VNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNK 219
V D+A L +V I+ +A P F M A +L+ L + + F++LLL +
Sbjct: 112 VTTDDA--LQELVELIYQQATSIPNFSYMGARLCNYLSHHL---TISPQSGNFRQLLLQR 166
Query: 220 CQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTE 279
C+ E+E +++A K D E KR A +LG + L E+
Sbjct: 167 CRTEYEA----KDQAAKGD----------EVTRKRFHAFVLFLGELYLNLEIKGTNGQVT 212
Query: 280 R--IMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMDAYFDRMEK 333
R I+ +++LL + NP ++++ L+ G +++ K K M+ R+E
Sbjct: 213 RADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDTWKEKGKTDMEEIIQRIEN 272
Query: 334 LSNNMKLSSRVRLMLKDSIELRKNKW 359
+ + S V+ ML +ELR + W
Sbjct: 273 VVLDANCSRDVKQMLLKLVELRSSNW 298
>sp|Q9H074|PAIP1_HUMAN Polyadenylate-binding protein-interacting protein 1 OS=Homo sapiens
GN=PAIP1 PE=1 SV=1
Length = 479
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 159 AVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLN 218
V D+A L +V I+ +A P F M A +L+ L + + F++LLL
Sbjct: 190 CVTTDDA--LQELVELIYQQATSIPNFSYMGARLCNYLSHHL---TISPQSGNFRQLLLQ 244
Query: 219 KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLT 278
+C+ E+E +++A K D E KR A +LG + L E+
Sbjct: 245 RCRTEYEV----KDQAAKGD----------EVTRKRFHAFVLFLGELYLNLEIKGTNGQV 290
Query: 279 ER--IMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMDAYFDRME 332
R I+ +++LL + NP ++++ L+ G +++ K K M+ R+E
Sbjct: 291 TRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEIIQRIE 350
Query: 333 KLSNNMKLSSRVRLMLKDSIELRKNKW 359
+ + S V+ ML +ELR + W
Sbjct: 351 NVVLDANCSRDVKQMLLKLVELRSSNW 377
>sp|Q9HAU5|RENT2_HUMAN Regulator of nonsense transcripts 2 OS=Homo sapiens GN=UPF2 PE=1
SV=1
Length = 1272
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 264 NIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGE-MIDHPKAKE 322
+R IGEL K KM T+ C+K LL + + +E C L+ T G + P++
Sbjct: 666 TVRFIGELTKFKMFTKNDTLHCLKMLLSDFSH---HHIEMACTLLETCGRFLFRSPESHL 722
Query: 323 HMDAYFDRMEKLSNNMKLSSRVRLMLKDS 351
++M + M L +R M++++
Sbjct: 723 RTSVLLEQMMRKKQAMHLDARYVTMVENA 751
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 256 KARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEED-----------VEAL 304
K +R + + + +GELY +M+ ++ + NPD + +
Sbjct: 863 KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLV 922
Query: 305 CILMSTIGEMIDHPKAKEHMDA---YFDR-------MEKLSNNMKLSSRVRLMLKDSIEL 354
C ++ T G+ D +K +D YF R +E + + + M+ D++EL
Sbjct: 923 CTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLEL 982
Query: 355 RKNK 358
+ K
Sbjct: 983 LRPK 986
>sp|Q3UFM5|NOM1_MOUSE Nucleolar MIF4G domain-containing protein 1 OS=Mus musculus GN=Nom1
PE=2 SV=2
Length = 854
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 267 LIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMI---DHPKAKEH 323
+I LY ++ ++ + +KKL+G + E+D+E + +++ +G + D KE
Sbjct: 462 MIAHLYNFHVVQSILIFDILKKLVGTF---TEKDIELILLMLKNVGFALRKDDALSLKEL 518
Query: 324 MDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEG--PKKIEEVHR 376
+ + N + +RVR ML+ + L+ N RK+ G P+ +E++ +
Sbjct: 519 ITEAQTQASGAGNKFQDQNRVRFMLETMLALKNNDL---RKIPGYNPEPVEKLKK 570
>sp|Q5EAQ1|M4GDB_DANRE MIF4G domain-containing protein B OS=Danio rerio GN=mif4gdb PE=1
SV=1
Length = 222
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 165 AVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNKCQEEF 224
+V L V S I D++L + F Y + + + N + F+R LLN+ Q+EF
Sbjct: 31 SVDLEKVSSVIVDQSLKDQVFSREAGRICYTIVQ--AEAKQTNGSV-FRRNLLNRLQQEF 87
Query: 225 ERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIM-- 282
+ REE R ++ + W+ + I ++ + M
Sbjct: 88 -----------------------KAREETRKRSTQEWVCLVSFICNIFDYLKVNNMPMVA 124
Query: 283 -----HECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAKEHMDAYFDRM-EKLSN 336
++C+ +L +EE+V+ L + + IG+ ++ + MD F+ + +
Sbjct: 125 LVHPVYDCLFRLAQSDALKNEEEVDCLVLQLHRIGDQLEKMNV-QLMDELFNLLRDGFLL 183
Query: 337 NMKLSSRVRLMLKDSIELRKNKWQ 360
LSS RL+L + +E R W+
Sbjct: 184 QEDLSSMGRLLLLEILEFRAGGWK 207
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 26/207 (12%)
Query: 188 MYANFFYFLAGELPDFSEDNEK---ITFKRLLLNKCQEEFERGEREQEEANKADKEGEIK 244
++A L ELP D TF+RL L KC+ E E + E +
Sbjct: 8 LFARLCVELFHELPPLPSDESHGDITTFERLFLRKCRIELENASPKTEHLPLVY----VD 63
Query: 245 QTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEAL 304
+T R++ +R++ E+YK +TE I+ L+ P E +A+
Sbjct: 64 ETN----------YYRFIKTVRVLAEVYKNSKITETTRKSMIQVLMNPI-LPPERITDAM 112
Query: 305 CILMSTIGEMIDHPKAKEHMDAYF--DRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQR 362
+ S IG++ D + E + R+ +L N ++R +D++ ++K
Sbjct: 113 NLFRSIIGKLADFHFSDEKFNQLVRSSRVVELEGNYNEEVKLRKEAEDALAMKKE----- 167
Query: 363 RKVEGPKKIEEVHRDAAQERQAQASRL 389
VE +++ E +++ + Q QA L
Sbjct: 168 -DVEMMEQLLESYKEEQGKLQLQAKAL 193
>sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1 OS=Homo sapiens GN=NOM1
PE=1 SV=1
Length = 860
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 267 LIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMI---DHPKAKEH 323
+I LY ++ ++ + +KKL+G + E+D+E + +++ +G + D KE
Sbjct: 468 VIAHLYNFHVVQSLLIFDILKKLIGTF---TEKDIELILLMLKNVGFSLRKDDALSLKEL 524
Query: 324 MDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEG--PKKIEEVHR 376
+ + + + +R+R ML+ + L+ N RK+ G P+ +E++ +
Sbjct: 525 ITEAQTKASGAGSEFQDQTRIRFMLETMLALKNNDM---RKIPGYDPEPVEKLRK 576
>sp|B0UXU6|M4GDA_DANRE MIF4G domain-containing protein A OS=Danio rerio GN=mif4gda PE=2
SV=1
Length = 216
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 64/157 (40%), Gaps = 32/157 (20%)
Query: 211 TFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGE 270
F+R LLN+ Q+EF REE R ++ + W+ + I
Sbjct: 68 VFRRNLLNRLQQEFI-----------------------AREETRKRSMQEWVCVVTFICS 104
Query: 271 LYKK--------KMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAKE 322
++ L + + ++C+ L +EE+V+ L + + +GE ++ ++
Sbjct: 105 IFDYIKVNNSPIAALVDPV-YDCLFGLAQPDSLMNEEEVDCLVVQLHRVGEQLEQTNSER 163
Query: 323 HMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKW 359
++ + LSS RL+L + +E R + W
Sbjct: 164 MNQLFYLLRDGFLLQEDLSSMTRLLLLEILEFRASGW 200
>sp|Q4P149|XRN2_USTMA 5'-3' exoribonuclease 2 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RAT1 PE=3 SV=3
Length = 1233
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Query: 295 NPDEEDVEALCILMSTIGEMIDHPKAKE-------HMDAYFDRMEKLSNNMKLSSRVRLM 347
NP+ E+ + L + M+ I HP+ K M F E++ NM R+ +M
Sbjct: 47 NPNGEEFDCLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVV-NMVRPRRLLMM 105
Query: 348 LKDSIELRKNKWQQR-RKVEGPKKIEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDF 406
D + R QQR R+ K+ E H +E+ A A A+G +++ +
Sbjct: 106 AIDGVAPRAKMNQQRSRRFRAAKEAREKHE---EEQAALAEWKAKGLGATDDEKKSKRAW 162
Query: 407 GPRGLSLGTPIFNIIYYLCLVVLIWWWV 434
++ GTP ++ L + +WV
Sbjct: 163 DSNAITPGTPFMDL-----LAASLRYWV 185
>sp|Q5ZKA3|CWC22_CHICK Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus GN=CWC22
PE=2 SV=2
Length = 926
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 46/224 (20%)
Query: 140 GDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQ-IFDKALMEPTFCEMYANFFYFLAG 198
G + ++N N + + ++ NI V G++S+ I P F +YA +
Sbjct: 174 GLVNKVNVSNIENIIHELLQENI---VRGRGLLSRSILQAQGASPIFTHVYAALVAIINS 230
Query: 199 ELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKAR 258
+ P+ E + KRL+LN F +G R R +K++
Sbjct: 231 KFPNIGE----LILKRLILN-----FRKGYR--------------------RNDKQL--- 258
Query: 259 RRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQY--ENPDEEDVEALCILMSTIGEMID 316
L + + + L + + + HE + + E P ++ +E + G +
Sbjct: 259 --CLTSSKFVAHL-----MNQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFLKESGLKLT 311
Query: 317 HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQ 360
+ ++A FDR+ + + K+ RV+ M++ +RK+ ++
Sbjct: 312 EVSPRG-INAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDGFK 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,152,823
Number of Sequences: 539616
Number of extensions: 7706816
Number of successful extensions: 48301
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 472
Number of HSP's that attempted gapping in prelim test: 43239
Number of HSP's gapped (non-prelim): 4144
length of query: 436
length of database: 191,569,459
effective HSP length: 120
effective length of query: 316
effective length of database: 126,815,539
effective search space: 40073710324
effective search space used: 40073710324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)