Query 013804
Match_columns 436
No_of_seqs 445 out of 3214
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:25:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 1.7E-57 6E-62 454.9 30.4 326 109-434 10-335 (348)
2 3stj_A Protease DEGQ; serine p 100.0 4.5E-53 1.5E-57 421.9 31.9 303 117-434 14-336 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 4.7E-51 1.6E-55 419.7 35.8 303 116-433 13-335 (436)
4 1te0_A Protease DEGS; two doma 100.0 5E-50 1.7E-54 396.3 31.0 302 114-433 7-316 (318)
5 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.9E-50 6.4E-55 416.4 27.8 301 116-432 19-353 (451)
6 4fln_A Protease DO-like 2, chl 100.0 4.4E-49 1.5E-53 409.9 33.0 292 124-433 45-358 (539)
7 1y8t_A Hypothetical protein RV 100.0 4.7E-48 1.6E-52 383.2 32.5 291 116-434 6-316 (324)
8 1ky9_A Protease DO, DEGP, HTRA 100.0 1.1E-48 3.9E-53 402.8 22.8 300 117-431 14-356 (448)
9 1lcy_A HTRA2 serine protease; 100.0 1.1E-47 3.7E-52 380.6 27.2 292 116-431 15-323 (325)
10 3num_A Serine protease HTRA1; 100.0 1.2E-47 4E-52 381.6 21.3 296 114-433 12-323 (332)
11 1l1j_A Heat shock protease HTR 100.0 6.6E-38 2.3E-42 297.0 18.3 219 117-336 5-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 4.7E-37 1.6E-41 291.9 16.8 213 117-333 14-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 3.7E-35 1.3E-39 278.0 21.0 214 114-334 18-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.2E-33 4.2E-38 266.5 18.7 200 116-325 31-230 (231)
15 3k6y_A Serine protease, possib 100.0 2.1E-30 7.1E-35 245.3 24.8 198 116-330 31-231 (237)
16 2w5e_A Putative serine proteas 99.9 1.2E-22 4.1E-27 180.7 20.0 128 150-298 19-146 (163)
17 2as9_A Serine protease; trypsi 99.9 5.4E-23 1.8E-27 190.7 14.5 180 126-326 2-204 (210)
18 1agj_A Epidermolytic toxin A; 99.9 6.5E-22 2.2E-26 187.3 15.2 161 151-323 54-240 (242)
19 2l97_A HTRA, putative serine p 99.8 6.3E-21 2.2E-25 164.3 12.4 117 305-433 2-128 (134)
20 2w7s_A Serine protease SPLA; h 99.8 1.1E-20 3.7E-25 173.6 10.9 156 152-324 22-198 (200)
21 2o8l_A V8 protease, taphylococ 99.8 2.1E-19 7.1E-24 173.4 19.8 159 151-326 33-212 (274)
22 2h5c_A Alpha-lytic protease; s 99.8 1.1E-19 3.7E-24 166.9 15.3 157 154-320 18-191 (198)
23 1wcz_A Glutamyl endopeptidase; 99.8 5.7E-19 1.9E-23 169.8 17.9 159 151-326 33-212 (268)
24 2vid_A Serine protease SPLB; h 99.8 2.5E-19 8.4E-24 164.6 14.4 157 152-324 22-202 (204)
25 1qtf_A Exfoliative toxin B; se 99.8 7.9E-20 2.7E-24 173.5 10.9 144 151-317 47-216 (246)
26 2qa9_E Streptogrisin-B; chymot 99.8 9.4E-19 3.2E-23 158.8 13.6 164 151-322 11-182 (185)
27 1hpg_A Glutamic acid specific 99.8 2.4E-18 8.1E-23 156.6 16.1 159 152-320 12-182 (187)
28 2oua_A Serine protease, protei 99.8 4.9E-18 1.7E-22 154.6 15.2 156 152-320 14-182 (188)
29 2ea3_A Chymotrypsin; celloulom 99.7 4.3E-17 1.5E-21 148.4 14.2 150 154-320 18-176 (189)
30 2pfe_A Protease A, alkaline se 99.7 2.5E-17 8.5E-22 149.5 10.8 154 152-320 14-179 (186)
31 2sga_A Proteinase A; hydrolase 99.7 3E-17 1E-21 148.4 9.9 156 151-321 11-177 (181)
32 1mbm_A NSP4 proteinase, chymot 99.7 2E-16 6.8E-21 139.6 10.7 115 150-296 13-130 (198)
33 1pq7_A Trypsin; ultra-high res 99.6 2E-14 6.8E-19 133.9 17.1 171 151-323 23-223 (224)
34 2zch_P Prostate-specific antig 99.6 3.2E-14 1.1E-18 133.6 18.3 170 151-325 23-234 (237)
35 1npm_A Neuropsin; serine prote 99.6 2.6E-14 8.8E-19 133.3 16.2 169 151-324 23-224 (225)
36 1lo6_A Kallikrein 6, HK6; seri 99.6 4.6E-14 1.6E-18 131.5 17.7 170 151-325 23-221 (223)
37 1gvz_A Kallikrein-1E2; antigen 99.6 2.6E-14 8.8E-19 134.2 16.1 170 151-325 23-234 (237)
38 2z7f_E Leukocyte elastase; ser 99.6 3.8E-14 1.3E-18 131.4 17.1 164 151-324 23-217 (218)
39 1eq9_A Chymotrypsin; FIRE ANT, 99.6 2.2E-14 7.6E-19 133.5 15.0 170 151-325 23-221 (222)
40 2xw9_A Complement factor D; im 99.6 7.1E-14 2.4E-18 130.4 18.4 172 151-324 23-227 (228)
41 1a7s_A Heparin binding protein 99.6 7.2E-14 2.5E-18 130.1 17.9 166 151-327 23-220 (225)
42 1fxy_A Coagulation factor XA-t 99.6 4.7E-14 1.6E-18 131.8 16.5 171 151-325 24-225 (228)
43 1mza_A Pro-granzyme K; apoptos 99.6 1.7E-13 5.7E-18 128.9 20.1 172 151-325 25-235 (240)
44 1ao5_A Glandular kallikrein-13 99.6 5.6E-14 1.9E-18 131.9 16.4 170 151-325 23-234 (237)
45 1azz_A Collagenase; complex (s 99.6 5.3E-14 1.8E-18 131.3 16.1 171 151-325 23-223 (226)
46 1fuj_A PR3, myeloblastin; hydr 99.6 2.9E-13 1E-17 125.6 20.7 164 151-324 26-220 (221)
47 2bdg_A Kallikrein-4; serine pr 99.6 7.6E-14 2.6E-18 130.0 16.7 169 151-324 23-221 (223)
48 1spj_A Kallikrein 1; serine pr 99.6 1.1E-13 3.7E-18 130.0 17.6 170 151-325 23-235 (238)
49 1ton_A Tonin; hydrolase(serine 99.6 1.7E-13 6E-18 128.4 18.8 169 152-325 22-232 (235)
50 3mfj_A Cationic trypsin; serin 99.6 1.2E-13 4.3E-18 128.5 17.5 169 151-325 22-221 (223)
51 4e7n_A Snake-venom thrombin-li 99.6 2.1E-13 7.2E-18 127.7 19.2 174 151-327 25-231 (238)
52 2aiq_A Protein C activator; sn 99.6 7.7E-14 2.6E-18 130.6 16.1 171 151-326 22-223 (231)
53 3s69_A Thrombin-like enzyme de 99.6 1.5E-13 5.1E-18 128.4 18.0 174 151-327 23-227 (234)
54 1sgf_A 7S NGF, nerve growth fa 99.5 8E-14 2.7E-18 131.2 16.0 170 151-325 26-237 (240)
55 2zgc_A Granzyme M; serine prot 99.5 2.3E-13 8E-18 128.2 18.8 176 151-327 23-231 (240)
56 1hj8_A Trypsin I; hydrolase, r 99.5 2E-13 6.8E-18 127.1 17.8 169 151-325 22-220 (222)
57 3fan_A Non-structural protein; 99.5 8.2E-15 2.8E-19 131.4 7.8 118 151-298 29-146 (213)
58 1orf_A Granzyme A; hydrolase-h 99.5 1.5E-13 5.2E-18 128.8 16.8 172 151-325 23-231 (234)
59 3s9c_A Vipera russelli protein 99.5 2.6E-13 9E-18 126.8 18.3 173 151-328 25-228 (234)
60 4ag1_A Chymase; hydrolase-de n 99.5 9.2E-13 3.1E-17 122.5 21.8 168 151-325 27-224 (226)
61 2psx_A Kallikrein-5; zinc inhi 99.5 1.9E-13 6.6E-18 127.5 17.0 170 151-325 24-224 (227)
62 3h7t_A Group 3 allergen smipp- 99.5 9.3E-14 3.2E-18 129.7 14.7 172 151-326 23-230 (235)
63 1iau_A Granzyme B; hydrolase-h 99.5 1.2E-12 4.2E-17 122.0 22.2 167 152-325 27-225 (227)
64 1bru_P Elastase, PPE; serine p 99.5 9.3E-13 3.2E-17 124.0 21.4 173 152-325 28-239 (241)
65 2qxi_A Kallikrein-7; S1 pocket 99.5 1.5E-13 5.1E-18 128.1 15.6 168 153-325 25-221 (224)
66 1cgh_A Cathepsin G; inflammati 99.5 6.5E-13 2.2E-17 123.7 19.5 168 151-325 26-223 (224)
67 1elt_A Elastase; serine protei 99.5 6E-13 2E-17 124.8 19.3 171 152-323 28-235 (236)
68 1gvk_B Elastase 1, peptide inh 99.5 3.2E-13 1.1E-17 127.1 16.9 173 152-325 28-238 (240)
69 4i8h_A Cationic trypsin, beta- 99.5 3.4E-13 1.2E-17 125.2 16.8 169 151-325 22-221 (223)
70 1si5_H Scatter factor, hepatoc 99.5 1.4E-12 4.9E-17 122.6 20.6 175 151-327 22-229 (240)
71 3rp2_A RAT MAST cell protease 99.5 1.4E-12 4.7E-17 121.1 20.1 182 126-324 12-223 (224)
72 3fzz_A Granzyme C; hydrolase, 99.5 2.3E-12 7.8E-17 119.8 20.9 168 151-325 27-226 (227)
73 1euf_A Duodenase; serine prote 99.5 2.1E-12 7.3E-17 120.4 20.7 168 151-325 26-224 (227)
74 2asu_B Hepatocyte growth facto 99.5 8.9E-13 3.1E-17 123.6 18.0 174 151-326 21-227 (234)
75 2pzd_A Serine protease HTRA2; 99.5 5.4E-14 1.9E-18 117.0 8.4 93 327-433 1-104 (113)
76 1p3c_A Glutamyl-endopeptidase; 99.5 8E-14 2.8E-18 128.9 10.2 159 151-323 29-212 (215)
77 1m9u_A Earthworm fibrinolytic 99.5 5.1E-13 1.7E-17 125.6 15.8 171 151-322 26-239 (241)
78 3gov_B MAsp-1; complement, ser 99.5 1.2E-12 4.1E-17 123.3 18.2 172 151-325 24-248 (251)
79 2oq5_A Transmembrane protease, 99.5 2.1E-12 7.3E-17 120.7 19.8 171 151-323 23-229 (232)
80 1aut_C Activated protein C; se 99.5 1.1E-12 3.8E-17 124.1 17.8 174 151-326 24-240 (250)
81 3mhw_U Urokinase-type plasmino 99.5 3.3E-12 1.1E-16 120.1 20.6 173 151-325 28-246 (247)
82 3ncl_A Suppressor of tumorigen 99.5 2.6E-12 9E-17 120.4 19.9 170 152-323 25-238 (241)
83 1pyt_D TC, PCPA-TC, chymotryps 99.5 3.4E-12 1.1E-16 120.9 20.6 173 151-324 40-249 (251)
84 2r0l_A Hepatocyte growth facto 99.5 1.9E-12 6.5E-17 122.2 18.4 174 151-326 22-240 (248)
85 2olg_A Pro-phenoloxidase activ 99.5 4.3E-12 1.5E-16 122.0 21.1 172 151-324 50-276 (278)
86 1ym0_A Fibrinotic enzyme compo 99.5 1.1E-12 3.8E-17 123.0 16.5 172 151-325 25-236 (238)
87 2any_A Kininogenin, plasma kal 99.5 1.8E-12 6.1E-17 121.9 18.0 173 151-325 26-236 (241)
88 3tvj_B Mannan-binding lectin s 99.5 9.1E-13 3.1E-17 123.5 15.8 174 151-325 21-240 (242)
89 2p3w_A Probable serine proteas 99.5 8E-14 2.7E-18 115.8 7.5 93 327-433 1-104 (112)
90 3beu_A Trypsin, SGT; beta shee 99.5 2.7E-12 9.4E-17 119.1 18.8 169 153-325 21-222 (224)
91 2hlc_A Collagenase; serine pro 99.5 3.6E-12 1.2E-16 119.0 18.8 171 151-324 27-226 (230)
92 2jkh_A Activated factor XA hea 99.4 7.5E-13 2.6E-17 124.5 14.1 174 151-326 24-234 (241)
93 2jde_A Urokinase-type plasmino 99.4 6E-12 2E-16 120.7 20.7 172 152-325 52-269 (276)
94 2f91_A Hepatopancreas trypsin; 99.4 6E-12 2.1E-16 118.0 20.2 168 153-323 29-235 (237)
95 1yc0_A Hepatocyte growth facto 99.4 2.6E-12 8.7E-17 124.0 18.1 174 151-326 57-275 (283)
96 3gyl_B Prostasin; ENAC, zymoge 99.4 1.5E-12 5E-17 123.7 16.0 174 151-326 23-243 (261)
97 3bg8_A Coagulation factor XIA 99.4 1.6E-12 5.5E-17 122.0 16.0 172 151-324 26-235 (238)
98 1rtf_B (TC)-T-PA, two chain ti 99.4 1.1E-11 3.7E-16 117.2 21.5 172 151-324 29-250 (252)
99 4dgj_A Enteropeptidase catalyt 99.4 2.5E-12 8.4E-17 120.2 16.7 172 151-324 23-234 (235)
100 1t8o_A Chymotrypsin A; chymotr 99.4 2E-12 6.9E-17 122.0 16.0 172 151-325 39-243 (245)
101 2wph_S Coagulation factor IXA 99.4 1.3E-12 4.6E-17 122.2 14.2 173 151-325 23-233 (235)
102 3h7o_A Group 3 allergen smipp- 99.4 9.3E-13 3.2E-17 122.5 13.0 170 153-326 27-227 (228)
103 2bz6_H Blood coagulation facto 99.4 8.6E-13 3E-17 125.1 12.9 174 151-326 23-241 (254)
104 1fon_A Procarboxypeptidase A-S 99.4 5E-13 1.7E-17 125.6 10.9 173 152-325 26-238 (240)
105 1ddj_A Plasminogen; catalytic 99.4 1.2E-11 4.2E-16 116.7 20.6 173 151-325 41-245 (247)
106 2i4s_A General secretion pathw 99.4 2E-13 6.8E-18 112.2 7.1 101 314-429 5-105 (105)
107 2bdy_A Thrombin; thrombin, com 99.4 5.2E-12 1.8E-16 122.2 16.9 173 151-325 55-285 (289)
108 1z8g_A Serine protease hepsin; 99.4 6.4E-12 2.2E-16 126.1 17.6 173 151-325 140-360 (372)
109 1fiw_A Beta-acrosin heavy chai 99.4 2.4E-11 8.2E-16 117.7 20.6 174 151-326 29-250 (290)
110 2qy0_B Complement C1R subcompo 99.4 5.8E-12 2E-16 118.3 15.2 171 152-326 22-240 (242)
111 4f4o_C Haptoglobin; globin fol 99.4 1.5E-12 5E-17 129.5 11.6 175 149-326 123-346 (347)
112 2f9n_A Alpha I tryptase; serin 99.4 8.2E-12 2.8E-16 117.7 16.0 173 151-325 26-242 (245)
113 3rm2_H Thrombin heavy chain; s 99.4 7.4E-12 2.5E-16 118.5 15.6 173 151-325 25-255 (259)
114 3i18_A LMO2051 protein; alpha- 99.4 2.7E-12 9.3E-17 104.4 10.6 72 350-433 7-78 (100)
115 3f1s_B Vitamin K-dependent pro 99.4 1.3E-12 4.3E-17 126.2 9.0 173 151-326 76-277 (283)
116 2vz5_A TAX1-binding protein 3; 99.4 1.9E-12 6.5E-17 111.8 9.0 99 322-432 28-136 (139)
117 2kjp_A Uncharacterized protein 99.3 5.7E-13 2E-17 106.5 4.9 72 350-433 1-72 (91)
118 1zjk_A Mannan-binding lectin s 99.3 3.7E-11 1.3E-15 121.6 18.0 173 152-325 183-401 (403)
119 2vnt_A Urokinase-type plasmino 99.3 9E-11 3.1E-15 112.2 19.7 190 126-326 35-270 (276)
120 2b9l_A Prophenoloxidase activa 99.3 1.2E-11 4.2E-16 124.9 14.1 174 151-326 161-384 (394)
121 2kl1_A YLBL protein; structure 99.3 4E-12 1.4E-16 102.2 8.2 72 350-433 5-76 (94)
122 2i6v_A General secretion pathw 99.3 4.1E-12 1.4E-16 100.5 7.7 69 350-429 19-87 (87)
123 3h5c_B Vitamin K-dependent pro 99.3 2.5E-11 8.4E-16 119.0 14.8 171 151-324 117-316 (317)
124 1md8_A C1R complement serine p 99.3 8.8E-11 3E-15 115.8 16.0 170 152-325 111-328 (329)
125 3nxp_A Prethrombin-1; alloster 99.2 2.5E-11 8.5E-16 123.9 11.7 196 128-325 165-420 (424)
126 3cp7_A Alkaline serine proteas 99.2 5.4E-11 1.9E-15 110.4 12.9 138 151-299 20-192 (218)
127 3id1_A Regulator of sigma E pr 99.2 2E-11 6.9E-16 98.2 8.5 70 353-433 5-76 (95)
128 2xxl_A GRAM-positive specific 99.2 1.2E-10 4E-15 118.3 16.2 174 151-326 145-374 (408)
129 1elv_A Complement C1S componen 99.2 1.9E-10 6.5E-15 113.5 16.9 170 152-326 103-326 (333)
130 1zyo_A Serine protease; beta-b 99.2 7.9E-11 2.7E-15 106.5 12.8 160 127-319 16-185 (191)
131 2eaq_A LIM domain only protein 99.2 8E-12 2.7E-16 99.3 5.5 72 332-421 17-90 (90)
132 1uit_A Human discs large 5 pro 99.2 5.7E-12 1.9E-16 105.4 4.3 91 322-425 5-106 (117)
133 1gpz_A Complement C1R componen 99.2 2.7E-10 9.1E-15 115.1 16.9 171 151-325 178-396 (399)
134 1arb_A Achromobacter protease 99.2 9.7E-11 3.3E-15 112.1 12.6 150 124-302 20-217 (268)
135 2xrc_A Human complement factor 99.2 1.4E-10 4.9E-15 122.4 15.0 182 141-325 334-556 (565)
136 4dur_A Plasminogen, serine pro 99.2 4.1E-10 1.4E-14 122.8 17.0 174 150-325 584-789 (791)
137 2f83_A Coagulation factor XI; 99.1 3.3E-10 1.1E-14 121.1 15.2 172 151-324 413-622 (625)
138 2zpm_A Regulator of sigma E pr 99.1 6.4E-11 2.2E-15 94.2 7.1 68 352-431 6-73 (91)
139 3cyy_A Tight junction protein 99.1 1.1E-10 3.8E-15 92.9 7.8 66 350-428 23-91 (92)
140 1rrk_A Complement factor B; BB 99.1 2.1E-10 7.2E-15 118.9 11.9 178 151-329 241-494 (497)
141 2pkt_A PDZ and LIM domain prot 99.1 6.9E-11 2.4E-15 94.0 6.0 75 332-423 13-89 (91)
142 3hrz_D Complement factor B; se 99.1 2.2E-10 7.7E-15 124.5 11.9 177 150-327 482-734 (741)
143 2w4f_A Protein LAP4; structura 99.1 1.1E-10 3.7E-15 93.9 6.2 81 331-422 13-95 (97)
144 1qau_A Neuronal nitric oxide s 99.1 2.7E-10 9.4E-15 94.2 7.9 84 332-432 13-99 (112)
145 1w9e_A Syntenin 1; cell adhesi 99.1 2.4E-10 8.3E-15 101.3 7.6 82 330-429 14-96 (166)
146 2vsp_A PDZ domain-containing p 99.0 2.4E-10 8E-15 91.0 6.3 73 333-423 15-89 (91)
147 2jil_A GRIP1 protein, glutamat 99.0 1.8E-10 6.3E-15 92.6 5.6 79 332-423 14-95 (97)
148 1wh1_A KIAA1095 protein; PDZ d 99.0 9.4E-11 3.2E-15 99.0 4.0 83 332-428 32-115 (124)
149 1x5q_A LAP4 protein; PDZ domai 99.0 2.1E-10 7.1E-15 94.6 5.6 82 331-423 25-108 (110)
150 2eeh_A PDZ domain-containing p 99.0 1.9E-10 6.5E-15 93.2 5.2 74 331-422 21-96 (100)
151 2pa1_A PDZ and LIM domain prot 99.0 5.8E-10 2E-14 87.8 7.8 73 332-421 12-86 (87)
152 2odp_A Complement C2; C3/C5 co 99.0 4.1E-10 1.4E-14 117.2 8.6 176 149-325 244-501 (509)
153 4fgm_A Aminopeptidase N family 99.0 6.9E-10 2.4E-14 117.5 10.2 72 350-433 496-567 (597)
154 2hga_A Conserved protein MTH13 99.0 1E-09 3.5E-14 92.8 9.2 66 350-431 25-90 (125)
155 3sfj_A TAX1-binding protein 3; 99.0 8.5E-10 2.9E-14 89.9 7.6 78 330-419 17-104 (104)
156 3tsv_A Tight junction protein 99.0 7.1E-10 2.4E-14 93.6 7.2 74 332-422 39-114 (124)
157 2v90_A PDZ domain-containing p 99.0 2.7E-10 9.3E-15 91.5 4.1 77 333-424 15-93 (96)
158 2uzc_A Human pdlim5, PDZ and L 99.0 1.3E-09 4.5E-14 85.9 7.8 72 333-421 14-87 (88)
159 2rcz_A Tight junction protein 99.0 1.3E-09 4.4E-14 84.2 7.3 58 350-420 21-81 (81)
160 1b8q_A Protein (neuronal nitri 99.0 4.2E-10 1.4E-14 95.3 4.8 82 332-430 20-104 (127)
161 1v5l_A PDZ and LIM domain 3; a 98.9 5.3E-10 1.8E-14 91.1 5.0 78 332-426 15-94 (103)
162 2dls_A PDZ-rhogef, RHO guanine 98.9 1.2E-09 4E-14 87.3 6.9 69 333-421 20-88 (93)
163 1uf1_A KIAA1526 protein; PDZ d 98.9 3.4E-10 1.2E-14 96.0 3.6 83 333-431 33-115 (128)
164 2kom_A Partitioning defective 98.9 2.2E-09 7.4E-14 90.2 8.2 77 333-421 42-121 (121)
165 1vb7_A PDZ and LIM domain 2; P 98.9 6.9E-10 2.3E-14 88.8 4.9 74 332-422 16-91 (94)
166 2fcf_A Multiple PDZ domain pro 98.9 1.5E-09 5.1E-14 88.2 6.9 78 331-421 15-100 (103)
167 1v5q_A GRIP1 homolog, glutamat 98.9 1E-09 3.5E-14 92.3 6.1 80 332-422 27-109 (122)
168 2q3g_A PDZ and LIM domain prot 98.9 2.7E-09 9.1E-14 84.4 8.0 74 332-422 13-88 (89)
169 2o2t_A Multiple PDZ domain pro 98.9 3.2E-10 1.1E-14 94.6 2.6 78 332-423 32-113 (117)
170 2i04_A Membrane-associated gua 98.9 2.7E-09 9.2E-14 83.5 7.8 71 333-418 12-85 (85)
171 1ihj_A INAD; intermolecular di 98.9 1.6E-09 5.3E-14 87.3 6.5 59 350-421 37-98 (98)
172 1wf7_A Enigma homologue protei 98.9 5.4E-10 1.8E-14 91.0 3.8 81 333-430 16-98 (103)
173 2jre_A C60-1 PDZ domain peptid 98.9 1.3E-09 4.3E-14 89.5 6.1 78 332-422 25-106 (108)
174 2koj_A Partitioning defective 98.9 3E-09 1E-13 87.7 8.3 79 332-422 22-103 (111)
175 2awx_A Synapse associated prot 98.9 2.7E-09 9.4E-14 87.1 7.9 86 333-431 15-104 (105)
176 1rgw_A ZAsp protein; PDZ, cyph 98.9 1.7E-09 5.7E-14 84.7 6.2 72 333-421 12-85 (85)
177 1ueq_A Membrane associated gua 98.9 4.5E-09 1.5E-13 88.4 8.6 74 333-421 31-107 (123)
178 3bpu_A Membrane-associated gua 98.9 3.6E-09 1.2E-13 83.4 7.4 71 333-421 15-87 (88)
179 2h2b_A Tight junction protein 98.9 3.1E-09 1E-13 87.0 7.2 79 332-422 19-99 (107)
180 2yub_A LIMK-2, LIM domain kina 98.9 4.9E-10 1.7E-14 93.8 2.3 63 350-425 44-110 (118)
181 2he4_A Na(+)/H(+) exchange reg 98.9 2.1E-09 7.1E-14 85.2 5.9 71 333-421 16-88 (90)
182 1wif_A RSGI RUH-020, riken cDN 98.9 2.1E-09 7.2E-14 90.9 6.2 59 350-419 49-110 (126)
183 1n7e_A AMPA receptor interacti 98.9 4.5E-09 1.5E-13 84.5 7.8 73 333-422 17-92 (97)
184 2jxo_A Ezrin-radixin-moesin-bi 98.9 8.9E-10 3E-14 88.8 3.4 73 333-422 21-95 (98)
185 3rle_A Golgi reassembly-stacki 98.9 1.7E-09 5.7E-14 99.7 5.7 69 350-429 16-85 (209)
186 1ujd_A KIAA0559 protein; PDZ d 98.9 2E-09 7E-14 89.7 5.7 83 327-422 25-111 (117)
187 2opg_A Multiple PDZ domain pro 98.9 4.7E-09 1.6E-13 84.4 7.6 77 332-424 15-94 (98)
188 1uep_A Membrane associated gua 98.9 1.9E-09 6.5E-14 87.7 5.2 75 332-421 20-97 (103)
189 1uez_A KIAA1526 protein; PDZ d 98.9 1.1E-09 3.7E-14 88.8 3.7 75 332-422 21-95 (101)
190 2f5y_A Regulator of G-protein 98.9 7.2E-09 2.5E-13 82.3 8.2 70 333-423 15-86 (91)
191 1wi2_A Riken cDNA 2700099C19; 98.9 3E-09 1E-13 86.8 6.1 72 332-421 27-100 (104)
192 3khf_A Microtubule-associated 98.8 3.1E-09 1.1E-13 85.7 6.1 60 350-422 34-95 (99)
193 2eeg_A PDZ and LIM domain prot 98.8 3.1E-09 1.1E-13 84.9 6.0 72 333-421 19-92 (94)
194 2e7k_A Maguk P55 subfamily mem 98.8 3.7E-09 1.3E-13 84.1 6.3 70 331-420 17-88 (91)
195 2iwn_A Multiple PDZ domain pro 98.8 4.8E-09 1.6E-13 84.0 6.9 77 332-421 15-94 (97)
196 1kwa_A Hcask/LIN-2 protein; PD 98.8 6.2E-09 2.1E-13 82.2 7.5 71 332-421 13-86 (88)
197 4amh_A Disks large homolog 1; 98.8 6.2E-09 2.1E-13 85.2 7.7 68 350-430 32-103 (106)
198 2iwq_A Multiple PDZ domain pro 98.8 4.4E-09 1.5E-13 88.6 6.8 78 331-421 35-120 (123)
199 2q9v_A Membrane-associated gua 98.8 3.6E-09 1.2E-13 83.7 5.7 73 333-420 14-89 (90)
200 2yt7_A Amyloid beta A4 precurs 98.8 6.3E-09 2.1E-13 84.4 7.2 75 332-419 21-98 (101)
201 1va8_A Maguk P55 subfamily mem 98.8 5.4E-09 1.8E-13 86.6 7.0 70 333-422 38-110 (113)
202 3r68_A Na(+)/H(+) exchange reg 98.8 7.3E-09 2.5E-13 82.7 7.4 72 333-422 17-90 (95)
203 2eno_A Synaptojanin-2-binding 98.8 6.6E-09 2.3E-13 86.9 7.4 99 305-422 7-109 (120)
204 1yph_C Chymotrypsin A, chain B 98.8 3.2E-08 1.1E-12 83.9 11.6 85 151-237 24-128 (131)
205 1uew_A Membrane associated gua 98.8 5.3E-09 1.8E-13 86.7 6.2 77 333-422 23-105 (114)
206 2dmz_A INAD-like protein; PDZ 98.8 3.2E-09 1.1E-13 90.0 5.0 80 332-424 27-110 (129)
207 1p1d_A PDZ45, glutamate recept 98.8 7.8E-09 2.7E-13 94.0 7.8 79 332-421 18-99 (196)
208 2edz_A PDZ domain-containing p 98.8 4.4E-10 1.5E-14 93.3 -0.5 66 350-428 38-105 (114)
209 1um1_A KIAA1849 protein, RSGI 98.8 7.7E-10 2.7E-14 91.1 0.9 84 333-430 20-106 (110)
210 2r4h_A Membrane-associated gua 98.8 1.3E-08 4.5E-13 84.1 8.3 73 333-422 36-111 (112)
211 2d90_A PDZ domain containing p 98.8 6.9E-09 2.4E-13 84.2 6.5 72 333-422 18-91 (102)
212 2ejy_A 55 kDa erythrocyte memb 98.8 5.9E-09 2E-13 84.0 5.9 68 333-419 25-95 (97)
213 1ujv_A Membrane associated gua 98.8 1.3E-08 4.5E-13 81.7 8.0 70 333-422 22-93 (96)
214 3ngh_A PDZ domain-containing p 98.8 3.8E-09 1.3E-13 86.3 4.8 60 350-422 26-87 (106)
215 2fne_A Multiple PDZ domain pro 98.8 8.8E-09 3E-13 85.9 6.8 76 333-422 37-115 (117)
216 1d5g_A Human phosphatase HPTP1 98.8 1.2E-08 4.2E-13 81.6 7.3 76 332-421 16-94 (96)
217 2vsv_A Rhophilin-2; scaffold p 98.8 1.3E-08 4.5E-13 83.8 7.6 60 350-421 44-105 (109)
218 3e17_A Tight junction protein 98.8 1.1E-08 3.7E-13 80.8 6.8 57 350-419 21-80 (88)
219 1nf3_C PAR-6B; semi-CRIB motif 98.8 6.4E-09 2.2E-13 88.2 5.6 76 333-421 43-126 (128)
220 2i1n_A Discs, large homolog 3; 98.8 5.5E-09 1.9E-13 84.7 4.8 79 332-423 15-97 (102)
221 2fe5_A Presynaptic protein SAP 98.8 1.4E-08 4.8E-13 80.9 7.1 76 333-421 15-94 (94)
222 3gsl_A Disks large homolog 4; 98.8 1.7E-08 5.8E-13 91.2 8.5 88 333-431 17-108 (196)
223 1m5z_A GRIP, AMPA receptor int 98.7 9.9E-09 3.4E-13 81.3 6.0 69 333-419 20-90 (91)
224 2vwr_A Ligand of NUMB protein 98.7 6.9E-09 2.4E-13 83.0 4.8 72 333-422 17-91 (95)
225 2qkv_A Inactivation-NO-after-p 98.7 1.1E-08 3.8E-13 82.1 6.0 68 333-420 21-91 (96)
226 1wfg_A Regulating synaptic mem 98.7 1.4E-08 4.7E-13 86.5 6.8 78 332-421 48-128 (131)
227 2g5m_B Neurabin-2; spinophilin 98.7 3.1E-09 1.1E-13 87.9 2.5 84 333-429 16-104 (113)
228 2kv8_A RGS12, regulator of G-p 98.7 9.5E-09 3.2E-13 80.0 5.2 58 350-420 23-82 (83)
229 2djt_A Unnamed protein product 98.7 1.2E-08 4E-13 83.0 5.8 76 332-422 22-100 (104)
230 2byg_A Channel associated prot 98.7 1.7E-08 5.9E-13 84.1 6.8 77 332-421 35-115 (117)
231 2kpk_A Membrane-associated gua 98.7 1.9E-08 6.3E-13 85.4 7.0 61 350-421 43-106 (129)
232 2jik_A Synaptojanin-2 binding 98.7 1.7E-08 5.7E-13 81.7 6.4 77 332-421 18-98 (101)
233 1wg6_A Hypothetical protein (r 98.7 7.4E-09 2.5E-13 87.7 4.4 79 332-421 37-123 (127)
234 3rle_A Golgi reassembly-stacki 98.7 1.1E-08 3.7E-13 94.2 5.9 85 331-430 94-182 (209)
235 2dlu_A INAD-like protein; PDZ 98.7 1.5E-08 5E-13 83.5 6.1 71 333-422 27-100 (111)
236 2la8_A Inactivation-NO-after-p 98.7 1.1E-08 3.7E-13 83.8 5.2 68 333-420 15-85 (106)
237 3mmg_A Nuclear inclusion prote 98.7 9.3E-07 3.2E-11 81.5 18.5 162 125-314 14-183 (241)
238 3i4w_A Disks large homolog 4; 98.7 1.3E-08 4.5E-13 82.6 5.5 71 333-421 23-96 (104)
239 1wfv_A Membrane associated gua 98.7 8.2E-09 2.8E-13 83.7 4.2 73 333-422 23-98 (103)
240 3qik_A Phosphatidylinositol 3, 98.7 1.4E-08 4.7E-13 81.8 5.2 67 333-417 29-98 (101)
241 2ego_A General receptor for ph 98.7 2.9E-08 1E-12 79.5 7.2 57 350-419 37-95 (96)
242 3o46_A Maguk P55 subfamily mem 98.7 3.2E-08 1.1E-12 78.7 7.3 72 333-422 16-90 (93)
243 2dkr_A LIN-7 homolog B; LIN-7B 98.7 2.1E-08 7.2E-13 79.7 6.2 72 333-421 17-91 (93)
244 1y7n_A Amyloid beta A4 precurs 98.7 3.4E-08 1.1E-12 78.4 7.3 55 351-419 33-89 (90)
245 1wha_A KIAA0147 protein, scrib 98.7 2E-08 6.7E-13 81.9 6.1 76 333-421 19-99 (105)
246 2edp_A Fragment, shroom family 98.7 1.8E-08 6.1E-13 81.5 5.7 73 333-422 22-96 (100)
247 1g9o_A NHE-RF; PDZ domain, com 98.7 2.2E-08 7.4E-13 79.3 6.0 72 333-421 15-88 (91)
248 2db5_A INAD-like protein; PDZ 98.7 2.4E-08 8.2E-13 84.5 6.6 77 332-422 37-117 (128)
249 2iwo_A Multiple PDZ domain pro 98.7 8.6E-09 2.9E-13 86.4 3.6 62 350-424 53-117 (120)
250 3cbz_A Dishevelled-2; PDZ doma 98.7 2.1E-08 7.2E-13 82.3 5.9 78 333-423 18-99 (108)
251 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.9E-08 6.5E-13 82.4 5.6 60 350-422 42-104 (108)
252 2gzv_A PRKCA-binding protein; 98.7 3.1E-08 1.1E-12 82.2 7.0 72 331-419 35-109 (114)
253 1wf8_A Neurabin-I; PDZ domain, 98.7 3E-08 1E-12 81.2 6.8 76 333-421 21-101 (107)
254 3kzd_A TIAM-1, T-lymphoma inva 98.7 5.1E-08 1.8E-12 77.8 7.9 69 332-418 20-90 (94)
255 2qg1_A Multiple PDZ domain pro 98.7 2.7E-08 9.3E-13 78.9 6.3 72 332-421 16-90 (92)
256 1tp5_A Presynaptic density pro 98.7 2.3E-08 8E-13 83.4 6.1 73 333-421 26-99 (119)
257 1whd_A RGS3, regulator of G-pr 98.7 2.4E-08 8.4E-13 80.7 6.0 59 350-421 36-96 (100)
258 1vae_A Rhophilin 2, rhophilin, 98.7 2.1E-08 7.3E-13 82.8 5.6 58 350-419 36-95 (111)
259 3axa_A Afadin, nectin-3, prote 98.7 3.1E-08 1.1E-12 80.8 6.5 77 332-422 21-100 (106)
260 1v62_A KIAA1719 protein; struc 98.7 1.8E-08 6.1E-13 84.0 5.0 74 333-422 28-104 (117)
261 3b76_A E3 ubiquitin-protein li 98.7 4E-08 1.4E-12 82.1 7.1 75 332-420 36-113 (118)
262 1qav_A Alpha-1 syntrophin (res 98.7 4.5E-08 1.5E-12 77.3 7.1 71 332-419 16-89 (90)
263 2kjd_A Sodium/hydrogen exchang 98.7 1.2E-08 4.2E-13 86.2 4.0 75 333-424 21-97 (128)
264 2pka_B Kallikrein A; serine pr 98.6 1.6E-07 5.4E-12 81.8 11.0 127 197-325 6-149 (152)
265 2dm8_A INAD-like protein; PDZ 98.6 2.7E-08 9.3E-13 82.5 5.9 76 332-423 28-106 (116)
266 3qe1_A Sorting nexin-27, G pro 98.6 3.5E-08 1.2E-12 80.6 6.4 60 350-422 43-104 (107)
267 1x5n_A Harmonin; PDZ domain, u 98.6 4.4E-09 1.5E-13 87.2 0.8 79 333-429 28-109 (114)
268 1q3o_A Shank1; PDZ, GKAP, pept 98.6 4.8E-08 1.6E-12 80.2 6.9 58 350-420 45-104 (109)
269 3gsl_A Disks large homolog 4; 98.6 4.1E-08 1.4E-12 88.6 7.1 62 350-424 130-194 (196)
270 3k1r_A Harmonin; protein-prote 98.6 7.7E-08 2.6E-12 87.2 8.8 59 350-422 110-170 (192)
271 4a8c_A Periplasmic PH-dependen 98.6 9E-08 3.1E-12 97.8 10.2 71 350-433 363-433 (436)
272 2d92_A INAD-like protein; PDZ 98.6 3.7E-08 1.2E-12 80.8 5.8 75 333-419 27-104 (108)
273 2yuy_A RHO GTPase activating p 98.6 1.1E-08 3.7E-13 86.5 2.6 59 350-421 61-121 (126)
274 1fc6_A Photosystem II D1 prote 98.6 1.4E-07 4.7E-12 95.0 11.1 84 331-430 84-172 (388)
275 2qt5_A Glutamate receptor-inte 98.6 4.8E-08 1.6E-12 89.0 6.9 62 350-424 135-199 (200)
276 2qt5_A Glutamate receptor-inte 98.6 9.1E-08 3.1E-12 87.1 8.7 73 332-421 19-94 (200)
277 2qbw_A PDZ-fibronectin fusion 98.6 8E-08 2.7E-12 87.0 8.2 68 350-431 24-96 (195)
278 1mfg_A ERB-B2 interacting prot 98.6 9.8E-08 3.3E-12 76.2 7.7 57 350-420 35-93 (95)
279 1x6d_A Interleukin-16; PDZ dom 98.6 1.3E-08 4.4E-13 85.0 2.4 78 332-424 27-107 (119)
280 2daz_A INAD-like protein; PDZ 98.6 5.3E-08 1.8E-12 81.9 6.2 75 332-422 36-113 (124)
281 2d8i_A T-cell lymphoma invasio 98.6 4.6E-08 1.6E-12 81.2 5.4 70 334-421 31-102 (114)
282 1wi4_A Synip, syntaxin binding 98.6 3.8E-08 1.3E-12 81.0 4.7 76 333-421 26-106 (109)
283 4e34_A Golgi-associated PDZ an 98.6 1.9E-07 6.5E-12 73.1 8.4 69 333-418 15-86 (87)
284 3nfk_A Tyrosine-protein phosph 98.6 9.6E-08 3.3E-12 78.0 6.7 59 350-419 43-107 (107)
285 2cs5_A Tyrosine-protein phosph 98.6 2.4E-08 8.1E-13 83.4 3.1 80 332-426 27-112 (119)
286 3soe_A Membrane-associated gua 98.6 2.1E-07 7.1E-12 76.9 8.7 74 333-426 24-99 (113)
287 3pv2_A DEGQ; trypsin fold, PDZ 98.6 8.3E-08 2.8E-12 98.4 7.7 65 350-427 386-450 (451)
288 2dc2_A GOPC, golgi associated 98.5 2.2E-07 7.6E-12 75.4 8.3 74 332-422 21-97 (103)
289 1uhp_A Hypothetical protein KI 98.5 1.4E-07 4.8E-12 77.0 6.9 59 350-421 41-102 (107)
290 3hpk_A Protein interacting wit 98.5 1.7E-07 5.9E-12 78.8 7.6 70 332-418 31-103 (125)
291 2edv_A FERM and PDZ domain-con 98.5 6.5E-08 2.2E-12 77.6 4.5 57 350-420 31-89 (96)
292 1n7t_A 99-MER peptide of densi 98.5 1.5E-07 5.2E-12 76.2 6.6 57 350-420 43-101 (103)
293 2eei_A PDZ domain-containing p 98.5 9E-08 3.1E-12 78.0 5.2 73 332-422 19-93 (106)
294 1p1d_A PDZ45, glutamate recept 98.5 1.3E-07 4.6E-12 85.8 6.8 73 333-420 120-195 (196)
295 3tsz_A Tight junction protein 98.5 1.4E-07 5E-12 94.8 7.6 72 333-421 20-93 (391)
296 2csj_A TJP2 protein; PDZ domai 98.5 1E-07 3.6E-12 79.2 5.3 76 333-422 27-106 (117)
297 3l4f_D SH3 and multiple ankyri 98.5 1.8E-07 6.2E-12 79.6 6.7 60 350-422 65-126 (132)
298 1i16_A Interleukin 16, LCF; cy 98.5 1.3E-07 4.4E-12 80.3 5.7 77 333-422 41-120 (130)
299 3r0h_A INAD, inactivation-NO-a 98.5 2.1E-07 7.3E-12 84.9 7.4 85 332-430 29-120 (206)
300 1uju_A Scribble; PDZ domain, c 98.5 3.6E-08 1.2E-12 81.2 2.0 59 350-421 44-105 (111)
301 3egg_C Spinophilin; PP1, serin 98.5 2.8E-07 9.4E-12 82.0 7.8 74 333-419 92-170 (170)
302 1v6b_A Harmonin isoform A1; st 98.5 3.9E-08 1.3E-12 82.1 1.9 73 333-419 29-106 (118)
303 2ehr_A INAD-like protein; PDZ 98.4 1.6E-07 5.5E-12 78.0 5.1 59 350-421 50-111 (117)
304 1lvm_A Catalytic domain of the 98.4 1.9E-05 6.4E-10 72.4 18.4 172 124-323 21-201 (229)
305 1um7_A Synapse-associated prot 98.4 1.2E-07 4E-12 78.2 3.3 71 333-421 27-100 (113)
306 3shw_A Tight junction protein 98.4 3.8E-07 1.3E-11 93.4 7.5 72 333-421 12-85 (468)
307 2z17_A Pleckstrin homology SEC 98.4 2.3E-07 7.8E-12 75.4 4.4 54 350-416 48-103 (104)
308 1ufx_A KIAA1526 protein; PDZ d 98.4 2.6E-07 8.9E-12 75.1 4.7 75 333-421 18-98 (103)
309 3r0h_A INAD, inactivation-NO-a 98.4 4.6E-07 1.6E-11 82.6 6.8 68 333-420 126-196 (206)
310 2krg_A Na(+)/H(+) exchange reg 98.3 1.1E-07 3.6E-12 88.0 1.1 73 333-423 21-96 (216)
311 1r6j_A Syntenin 1; PDZ, membra 98.3 1.7E-06 5.7E-11 67.2 6.6 53 353-418 26-80 (82)
312 3suz_A Amyloid beta A4 precurs 98.2 5E-07 1.7E-11 90.9 3.8 83 333-428 217-302 (388)
313 2lob_A Golgi-associated PDZ an 97.5 1.6E-07 5.4E-12 77.7 0.0 55 350-417 53-110 (112)
314 1z87_A Alpha-1-syntrophin; pro 98.2 1.4E-06 4.6E-11 82.8 5.0 73 332-421 89-164 (263)
315 1ky9_A Protease DO, DEGP, HTRA 98.1 2.9E-07 9.8E-12 94.3 0.0 65 350-427 383-447 (448)
316 3k50_A Putative S41 protease; 98.1 1.1E-06 3.7E-11 88.6 3.5 58 351-422 91-148 (403)
317 3gge_A PDZ domain-containing p 98.0 2.2E-05 7.4E-10 62.4 8.4 71 332-419 16-89 (95)
318 2xkx_A Disks large homolog 4; 97.9 1.5E-05 5E-10 86.5 7.6 60 350-422 89-151 (721)
319 1k32_A Tricorn protease; prote 97.9 2.4E-05 8.4E-10 87.9 9.1 69 350-429 748-825 (1045)
320 2xkx_A Disks large homolog 4; 97.7 2.6E-05 8.9E-10 84.5 6.4 61 350-423 184-247 (721)
321 1w9e_A Syntenin 1; cell adhesi 97.7 2.6E-06 8.7E-11 75.1 -1.3 55 353-429 110-164 (166)
322 3zve_A 3C protease; hydrolase, 97.6 0.0051 1.7E-07 55.1 18.1 147 151-313 22-174 (190)
323 2hal_A Hepatitis A protease 3C 97.6 0.0039 1.3E-07 57.0 17.0 176 119-313 3-204 (212)
324 3qzr_A 3C protein; chymotrypsi 97.5 0.023 7.9E-07 50.5 21.2 156 126-313 16-178 (187)
325 4dcd_A Protease 3C, genome pol 97.5 0.013 4.5E-07 52.2 19.5 146 151-313 29-181 (190)
326 3q3y_A HEVB EV93 3C protease; 97.4 0.02 6.8E-07 50.8 19.4 157 126-313 14-176 (191)
327 2pka_A Kallikrein A; serine pr 97.4 0.00022 7.6E-09 54.5 5.8 47 151-200 23-78 (80)
328 4fln_A Protease DO-like 2, chl 97.3 0.00035 1.2E-08 72.6 7.8 60 350-422 415-474 (539)
329 2b0f_A Picornain 3C (protease 97.2 0.012 4E-07 52.3 14.8 144 152-313 23-173 (182)
330 1cqq_A Type 2 rhinovirus 3C pr 97.0 0.066 2.3E-06 47.4 18.2 145 152-313 23-174 (180)
331 3suz_A Amyloid beta A4 precurs 96.8 0.00022 7.4E-09 71.5 0.0 58 350-420 315-374 (388)
332 2bhg_A Foot-and-mouth disease 96.8 0.005 1.7E-07 56.1 9.1 139 153-297 31-185 (209)
333 2ijd_1 Picornain 3C, RNA-direc 95.8 0.49 1.7E-05 50.2 19.6 135 152-297 23-164 (644)
334 1yph_E Chymotrypsin A, chain C 95.7 0.0059 2E-07 48.3 3.2 52 272-324 40-94 (97)
335 1wxr_A Haemoglobin protease; h 95.1 0.061 2.1E-06 59.2 9.6 80 152-236 56-144 (1048)
336 4ash_A NS6 protease; hydrolase 92.4 0.76 2.6E-05 38.8 9.0 136 151-299 14-164 (185)
337 3e90_B NS3 protease; trypsin-l 90.7 0.63 2.2E-05 40.7 7.1 132 124-295 21-155 (198)
338 2fp7_B Serine protease NS3; fl 90.5 0.17 5.7E-06 43.5 3.2 116 151-296 19-137 (172)
339 2fom_B Polyprotein; flavivirus 90.0 0.19 6.6E-06 43.7 3.3 133 123-295 16-151 (185)
340 3lkw_A Fusion protein of nonst 89.6 0.84 2.9E-05 41.0 7.1 114 152-295 85-201 (236)
341 2ggv_B NS3, non-structural pro 89.5 0.32 1.1E-05 42.1 4.2 133 125-297 17-152 (185)
342 3u1j_B Serine protease NS3; se 89.3 0.25 8.7E-06 43.0 3.5 133 124-296 26-161 (191)
343 1ep5_B Capsid protein C, coat 88.5 0.67 2.3E-05 38.0 5.2 30 269-298 98-127 (157)
344 2yew_A Capsid protein, coat pr 88.3 0.4 1.4E-05 43.0 4.1 29 271-299 197-225 (253)
345 4agk_A Capsid protein, coat pr 88.3 0.78 2.7E-05 37.6 5.5 30 270-299 100-129 (158)
346 1svp_A Sindbis virus capsid pr 88.2 0.47 1.6E-05 39.1 4.2 29 271-299 102-130 (161)
347 2fyq_A Chymotrypsin-like cyste 88.2 2.8 9.7E-05 35.5 9.0 136 151-299 25-175 (194)
348 1vcp_A Semliki forest virus ca 88.1 0.84 2.9E-05 37.0 5.5 30 270-299 92-121 (149)
349 1kxf_A Sindbis virus capsid pr 87.0 0.48 1.6E-05 42.8 3.9 28 271-298 207-234 (264)
350 3su6_A NS3 protease, NS4A prot 79.6 0.98 3.4E-05 39.3 2.6 132 154-316 64-196 (203)
351 3dor_A Protein CT_858, CPAF; m 63.9 12 0.00042 38.7 6.9 48 382-429 113-184 (583)
352 4hcz_A PHD finger protein 1; p 52.4 51 0.0018 23.0 6.3 38 172-209 4-41 (58)
353 4esy_A CBS domain containing m 44.8 12 0.0004 31.6 2.6 22 276-297 47-68 (170)
354 3s6n_G Small nuclear ribonucle 43.7 72 0.0025 23.2 6.6 33 176-208 15-47 (76)
355 2hrv_A 2A cysteine proteinase; 43.6 39 0.0013 28.1 5.4 30 267-297 94-123 (142)
356 2o8m_A Protease; NS3, NS4A, vi 43.4 14 0.00047 32.5 2.8 42 275-317 146-187 (200)
357 2eqj_A Metal-response element- 43.2 76 0.0026 22.8 6.2 38 172-209 14-51 (66)
358 1z8r_A Coxsackievirus B4 polyp 40.2 57 0.002 27.8 6.0 31 266-297 113-143 (166)
359 1i4k_A Putative snRNP SM-like 39.0 53 0.0018 23.9 5.2 33 176-208 15-47 (77)
360 1h64_1 SnRNP SM-like protein; 38.5 51 0.0017 23.9 5.0 33 176-208 15-47 (75)
361 1d3b_B Protein (small nuclear 37.5 49 0.0017 25.0 4.9 33 176-208 15-47 (91)
362 1th7_A SnRNP-2, small nuclear 37.1 54 0.0019 24.2 5.0 33 176-208 20-52 (81)
363 2jvf_A De novo protein M7; tet 35.9 46 0.0016 24.2 4.1 21 410-430 6-26 (96)
364 1y96_A Gemin6, SIP2, GEM-assoc 35.4 86 0.003 23.7 5.8 32 176-207 18-50 (86)
365 3k6e_A CBS domain protein; str 35.4 20 0.00068 29.9 2.6 22 275-296 45-66 (156)
366 1mgq_A SM-like protein; LSM, R 34.5 63 0.0021 24.0 5.0 33 176-208 26-58 (83)
367 3k6e_A CBS domain protein; str 34.0 22 0.00074 29.7 2.6 16 281-296 118-133 (156)
368 3nqr_A Magnesium and cobalt ef 33.2 23 0.00079 27.9 2.5 21 276-296 97-117 (127)
369 3s6n_F Small nuclear ribonucle 33.1 73 0.0025 23.9 5.2 32 176-207 17-48 (86)
370 1d3b_A Protein (small nuclear 33.0 78 0.0027 23.0 5.2 33 176-208 16-48 (75)
371 4emk_B U6 snRNA-associated SM- 32.3 58 0.002 23.6 4.4 32 176-207 15-46 (75)
372 3lfr_A Putative metal ION tran 31.9 25 0.00084 28.2 2.5 20 277-296 99-118 (136)
373 1ljo_A Archaeal SM-like protei 31.7 85 0.0029 22.8 5.3 33 176-208 16-49 (77)
374 3gby_A Uncharacterized protein 31.6 26 0.00088 27.6 2.6 20 277-296 98-117 (128)
375 4emg_A Probable U6 snRNA-assoc 31.4 73 0.0025 24.3 5.0 33 176-208 20-52 (93)
376 3hf7_A Uncharacterized CBS-dom 31.3 26 0.00088 27.9 2.5 20 277-296 99-118 (130)
377 4emk_C U6 snRNA-associated SM- 31.0 76 0.0026 25.2 5.2 33 176-208 34-66 (113)
378 3i8n_A Uncharacterized protein 30.9 26 0.0009 27.7 2.5 20 277-296 101-120 (130)
379 1b34_A Protein (small nuclear 30.9 1.1E+02 0.0036 24.6 6.2 61 176-238 13-73 (119)
380 1i8f_A Putative snRNP SM-like 30.8 60 0.0021 24.0 4.3 33 176-208 22-54 (81)
381 3jtf_A Magnesium and cobalt ef 30.3 26 0.00089 27.7 2.4 20 277-296 98-117 (129)
382 4emk_A U6 snRNA-associated SM- 30.0 79 0.0027 24.3 5.0 33 176-208 31-63 (94)
383 3bw1_A SMX4 protein, U6 snRNA- 30.0 66 0.0022 24.7 4.6 33 176-208 21-53 (96)
384 1b34_B Protein (small nuclear 28.9 84 0.0029 25.1 5.2 34 175-208 39-72 (118)
385 3kpb_A Uncharacterized protein 28.0 33 0.0011 26.4 2.6 20 277-296 92-111 (122)
386 3lv9_A Putative transporter; C 27.6 32 0.0011 27.8 2.5 20 277-296 117-136 (148)
387 1p0z_A Sensor kinase CITA; tra 27.5 38 0.0013 27.2 3.0 19 281-299 106-124 (131)
388 3oi8_A Uncharacterized protein 27.4 32 0.0011 28.3 2.5 20 277-296 132-151 (156)
389 3oco_A Hemolysin-like protein 27.3 30 0.001 28.3 2.3 20 277-296 115-134 (153)
390 4emh_A Probable U6 snRNA-assoc 26.8 1E+02 0.0035 24.2 5.2 32 176-207 27-58 (105)
391 3lqn_A CBS domain protein; csg 26.4 35 0.0012 27.5 2.6 16 281-296 119-134 (150)
392 2m0o_A PHD finger protein 1; t 26.3 80 0.0027 23.3 4.0 35 175-209 30-64 (79)
393 2nyc_A Nuclear protein SNF4; b 25.8 37 0.0013 26.9 2.6 20 277-296 113-132 (144)
394 3kxr_A Magnesium transporter, 25.7 35 0.0012 29.9 2.6 20 277-296 146-165 (205)
395 3d3r_A Hydrogenase assembly ch 25.7 1.1E+02 0.0039 23.9 5.2 45 188-235 26-72 (103)
396 3pgw_B SM B; protein-RNA compl 25.3 75 0.0026 28.7 4.6 33 176-208 15-47 (231)
397 4gqw_A CBS domain-containing p 24.9 39 0.0013 27.0 2.6 21 276-296 114-134 (152)
398 2ef7_A Hypothetical protein ST 24.8 39 0.0013 26.5 2.5 20 277-296 97-116 (133)
399 4a4f_A SurviVal of motor neuro 24.8 1.8E+02 0.0061 20.2 6.5 36 173-208 10-46 (64)
400 3ctu_A CBS domain protein; str 24.7 40 0.0014 27.5 2.6 16 281-296 118-133 (156)
401 1n9r_A SMF, small nuclear ribo 24.3 1E+02 0.0034 23.5 4.6 34 175-208 31-65 (93)
402 2rih_A Conserved protein with 23.9 41 0.0014 26.8 2.5 20 277-296 100-119 (141)
403 3ghd_A A cystathionine beta-sy 23.9 39 0.0013 24.1 2.1 20 276-296 21-40 (70)
404 3lhh_A CBS domain protein; str 23.6 41 0.0014 28.2 2.5 20 277-296 136-155 (172)
405 3sl7_A CBS domain-containing p 23.5 42 0.0014 27.9 2.6 21 276-296 127-147 (180)
406 2uv4_A 5'-AMP-activated protei 23.4 43 0.0015 27.1 2.6 20 277-296 123-142 (152)
407 3by8_A Sensor protein DCUS; hi 23.4 50 0.0017 26.9 3.0 17 281-297 111-127 (142)
408 2uv4_A 5'-AMP-activated protei 22.4 47 0.0016 26.9 2.6 22 276-297 50-71 (152)
409 3ocm_A Putative membrane prote 22.3 41 0.0014 28.4 2.3 20 277-296 129-148 (173)
410 2e5p_A Protein PHF1, PHD finge 22.2 2.2E+02 0.0075 20.4 6.0 37 173-209 11-47 (68)
411 3lqn_A CBS domain protein; csg 22.1 47 0.0016 26.7 2.6 21 276-296 46-66 (150)
412 2p9m_A Hypothetical protein MJ 22.1 49 0.0017 26.1 2.6 14 282-295 113-126 (138)
413 3kpb_A Uncharacterized protein 21.7 54 0.0018 25.1 2.7 21 276-296 30-50 (122)
414 3ctu_A CBS domain protein; str 21.4 49 0.0017 26.9 2.5 21 276-296 46-66 (156)
415 1o50_A CBS domain-containing p 21.2 50 0.0017 26.9 2.5 20 277-296 125-144 (157)
416 2emq_A Hypothetical conserved 21.1 49 0.0017 26.8 2.5 14 282-295 116-129 (157)
417 3fio_A A cystathionine beta-sy 21.0 48 0.0016 22.7 2.1 20 276-296 21-40 (70)
418 2o16_A Acetoin utilization pro 20.6 52 0.0018 27.0 2.6 21 276-296 34-54 (160)
419 1yav_A Hypothetical protein BS 20.6 53 0.0018 26.8 2.6 16 281-296 118-133 (159)
420 1yav_A Hypothetical protein BS 20.3 54 0.0019 26.7 2.6 21 276-296 45-65 (159)
421 2fwk_A U6 snRNA-associated SM- 20.1 94 0.0032 24.9 3.9 32 176-207 39-70 (121)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-57 Score=454.95 Aligned_cols=326 Identities=92% Similarity=1.360 Sum_probs=295.6
Q ss_pred cccCccchhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEE
Q 013804 109 RKLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAY 188 (436)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~ 188 (436)
....+.+.+..++++++.||||.|.......+.|..+..+.+.+.||||+|+++||||||+||+.++..+.|.+.+++.+
T Consensus 10 ~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~ 89 (348)
T 3qo6_A 10 KKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTF 89 (348)
T ss_dssp CCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEE
T ss_pred cccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEE
Confidence 34556788889999999999999999887777776655555678999999999999999999999999999999999999
Q ss_pred eeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEE
Q 013804 189 DAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 268 (436)
Q Consensus 189 ~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i 268 (436)
+++++..|+.+||||||++.+...+++++|+++..+..|+.|+++|||++...+++.|.++.+.+.......+.....++
T Consensus 90 ~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i 169 (348)
T 3qo6_A 90 DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 169 (348)
T ss_dssp EEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEEEE
T ss_pred EEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccCEE
Confidence 99999999999999999987644688999988888899999999999999888999999999888766544444456789
Q ss_pred EEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceecceecceeeecchhhhhcC
Q 013804 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLG 348 (436)
Q Consensus 269 ~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~~~~~~~~g 348 (436)
++++.+|+|+|||||+|.+|+||||+++...+++...+++|+||++.+++++++++++|++.+||||+.+.+....+.++
T Consensus 170 ~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~ 249 (348)
T 3qo6_A 170 QTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLG 249 (348)
T ss_dssp EECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTT
T ss_pred EEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcC
Confidence 99999999999999999999999999999887766789999999999999999999999999999999999876677888
Q ss_pred ccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 013804 349 VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 428 (436)
Q Consensus 349 ~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 428 (436)
+.|++|.+|.+++||+++||++..++..+.|+.||+|++|||++|.+++|+..+|...++|++++|+|+|+|++++++++
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 329 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVT 329 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEEE
Confidence 89999999999999999999998889999999999999999999999999999998878999999999999999999999
Q ss_pred eecCCC
Q 013804 429 LEPKPD 434 (436)
Q Consensus 429 ~~~~~~ 434 (436)
+.++++
T Consensus 330 l~~~~~ 335 (348)
T 3qo6_A 330 LEPKPD 335 (348)
T ss_dssp CEECC-
T ss_pred EccCCC
Confidence 987764
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=4.5e-53 Score=421.86 Aligned_cols=303 Identities=37% Similarity=0.602 Sum_probs=263.1
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC------ccccc--------cccCcCeEEEEEEEcCC-CEEEecccccCCCCeEEEE
Q 013804 117 ATVRLFQENTPSVVNITNLAARQD------AFTLD--------VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (436)
Q Consensus 117 ~~~~~~~~~~~sVV~I~~~~~~~~------~~~~~--------~~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (436)
++.++++++.||||.|.+...... .|... ......+.||||+|+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~ 93 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEE
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEE
Confidence 467899999999999998764431 11100 01122588999999987 9999999999999999999
Q ss_pred ecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCC
Q 013804 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (436)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~ 261 (436)
+.|++.+++++++.|+.+||||||++.+ ..++++.++++..++.|++|+++|||++...+++.|+|++..+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~---~~ 169 (345)
T 3stj_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (345)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCS---SS
T ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEccc-CCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 9999999999999999999999999754 3789999988888999999999999999999999999998877511 11
Q ss_pred CCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceecceecceeeec-
Q 013804 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP- 340 (436)
Q Consensus 262 ~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~- 340 (436)
..+..++++|+.+++|+|||||||.+|+||||+++....+++..+++|+||++.++++++++++.|++.++|||+.+++
T Consensus 170 ~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 2235789999999999999999999999999999998877677899999999999999999999999999999999986
Q ss_pred -chhhhhcCc---cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 013804 341 -DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEV 416 (436)
Q Consensus 341 -~~~~~~~g~---~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v 416 (436)
.+.++.+|+ .|++|.+|.++|||+++||++ ||+|++|||++|.++.|+..++...++|++++|+|
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCT-----------TCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 345677776 799999999999999999999 99999999999999999999999888999999999
Q ss_pred EECCEEEEEEEEeecCCC
Q 013804 417 LRGDQKEKIPVKLEPKPD 434 (436)
Q Consensus 417 ~R~g~~~~~~v~~~~~~~ 434 (436)
+|+|+++++++++.+.++
T Consensus 319 ~R~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 319 LRNGKPLEVEVTLDTSTS 336 (345)
T ss_dssp EETTEEEEEEEECEEC--
T ss_pred EECCEEEEEEEEEcccCC
Confidence 999999999999987654
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=4.7e-51 Score=419.72 Aligned_cols=303 Identities=37% Similarity=0.604 Sum_probs=265.7
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccC------c---c-cc---c-cccCcCeEEEEEEEcCC-CEEEecccccCCCCeEEE
Q 013804 116 LATVRLFQENTPSVVNITNLAARQD------A---F-TL---D-VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRV 180 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~~------~---~-~~---~-~~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V 180 (436)
.++.++++++.||||.|.+...... . | .. + ......+.||||+|+++ ||||||+||+.++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V 92 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEE
Confidence 3578899999999999998764431 1 1 10 0 01123589999999988 999999999999999999
Q ss_pred EecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCC
Q 013804 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (436)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~ 260 (436)
.+.|++.+++++++.|+.+||||||++.+. .+++++|+++..+++|++|+++|||++...+++.|+|++..+... .
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAllkv~~~~-~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~---~ 168 (436)
T 4a8c_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---N 168 (436)
T ss_pred EeCCCCEEEEEEEEEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeeccccc---C
Confidence 999999999999999999999999997543 789999998888999999999999999999999999998877511 1
Q ss_pred CCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceecceecceeeec
Q 013804 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP 340 (436)
Q Consensus 261 ~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~ 340 (436)
...+..++++|+.+++|+|||||+|.+|+||||+++.....++..+++|+||++.+++++++++++|++.++|||+.+++
T Consensus 169 ~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 248 (436)
T 4a8c_A 169 LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (436)
T ss_pred CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEecc
Confidence 12345789999999999999999999999999999988776667899999999999999999999999999999999986
Q ss_pred --chhhhhcCc---cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEE
Q 013804 341 --DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVE 415 (436)
Q Consensus 341 --~~~~~~~g~---~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~ 415 (436)
.+.++.+|+ .|++|.+|.++|||+++||++ ||+|++|||++|.+++++..++....+|++++|+
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~ 317 (436)
T 4a8c_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLG 317 (436)
T ss_pred cCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE
Confidence 345677776 699999999999999999999 9999999999999999999999887889999999
Q ss_pred EEECCEEEEEEEEeecCC
Q 013804 416 VLRGDQKEKIPVKLEPKP 433 (436)
Q Consensus 416 v~R~g~~~~~~v~~~~~~ 433 (436)
|.|+|+.+++++++..++
T Consensus 318 v~R~g~~~~~~v~l~~~~ 335 (436)
T 4a8c_A 318 LLRNGKPLEVEVTLDTST 335 (436)
T ss_pred EEECCEEEEEEEEECCCC
Confidence 999999999999987654
No 4
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=5e-50 Score=396.30 Aligned_cols=302 Identities=34% Similarity=0.519 Sum_probs=260.1
Q ss_pred cchhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEE
Q 013804 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (436)
Q Consensus 114 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv 193 (436)
.+.++.++++++.+|||.|........+ .......+.||||+|+++||||||+||+.++..+.|.+.+++.++++++
T Consensus 7 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~ 83 (318)
T 1te0_A 7 TPASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLV 83 (318)
T ss_dssp CCCCCHHHHHHHGGGEEEEEEEEECSSS---SCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEE
T ss_pred ccccHHHHHHhcCCcEEEEEeEeccCCc---ccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEE
Confidence 4455678999999999999987644321 1112235789999999989999999999999999999999999999999
Q ss_pred EEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 013804 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (436)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~ 273 (436)
.+|+.+||||||++.+ ..+++++|+++..+..|++|+++|||++....++.|+|+...+.... ......++++++.
T Consensus 84 ~~d~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d~~ 159 (318)
T 1te0_A 84 GSDSLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDAS 159 (318)
T ss_dssp EEETTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEESSC
T ss_pred EeCCCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEECCC
Confidence 9999999999999875 36889999877778999999999999998889999999877654211 1123467899999
Q ss_pred cCCCCCCCeEECCCCcEEEEEeeeecCCC---CCCcceeeeeeeccchhhhhccccceecceecceeeecc--hhhhhcC
Q 013804 274 INPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPD--QSVEQLG 348 (436)
Q Consensus 274 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~---~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~~--~~~~~~g 348 (436)
+++|+|||||+|.+|+||||+++.....+ ...+++|+||++.+++++++++++|++.++|||+.+.+. ..++.+|
T Consensus 160 ~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g 239 (318)
T 1te0_A 160 INHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGG 239 (318)
T ss_dssp CCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSC
T ss_pred CCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhcc
Confidence 99999999999999999999998765432 356899999999999999999999999999999999863 3456666
Q ss_pred c---cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEE
Q 013804 349 V---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKI 425 (436)
Q Consensus 349 ~---~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (436)
+ .|++|..|.+++||+++||++ ||+|++|||++|.++.|+..++....+|++++|+|+|+|+.+++
T Consensus 240 ~~~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 308 (318)
T 1te0_A 240 IDQLQGIVVNEVSPDGPAANAGIQV-----------NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTL 308 (318)
T ss_dssp SSSCCCEEEEEECTTSTTTTTCCCT-----------TCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEE
T ss_pred CCCCCcEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEE
Confidence 5 799999999999999999999 99999999999999999999998878999999999999999999
Q ss_pred EEEeecCC
Q 013804 426 PVKLEPKP 433 (436)
Q Consensus 426 ~v~~~~~~ 433 (436)
++++.+.+
T Consensus 309 ~v~~~~~~ 316 (318)
T 1te0_A 309 QVTIQEYP 316 (318)
T ss_dssp EEECEECC
T ss_pred EEEEccCC
Confidence 99998765
No 5
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.9e-50 Score=416.39 Aligned_cols=301 Identities=38% Similarity=0.611 Sum_probs=252.5
Q ss_pred hhHHHHHHHhCCceEEEEEeeecc-----------Ccccccc-----------ccCcCeEEEEEEEcCC-CEEEeccccc
Q 013804 116 LATVRLFQENTPSVVNITNLAARQ-----------DAFTLDV-----------LEVPQGSGSGFVWDSK-GHVVTNYHVI 172 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~-----------~~~~~~~-----------~~~~~~~GSGfiI~~~-G~ILT~aHvv 172 (436)
.++.++++++.||||.|.+..... ++|.... .....+.||||+|+++ ||||||+||+
T Consensus 19 ~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv 98 (451)
T 3pv2_A 19 PSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVI 98 (451)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHH
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHh
Confidence 356789999999999999875321 1211000 1223578999999975 9999999999
Q ss_pred CCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCC-----CceeEeE
Q 013804 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGV 247 (436)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~ 247 (436)
.++..+.|.+.|++.+++++++.|+.+||||||++. ..++++.|+++..+++|++|+++|||++.. .+++.|+
T Consensus 99 ~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Gi 176 (451)
T 3pv2_A 99 RNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGI 176 (451)
T ss_dssp TTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEE
T ss_pred CCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEE
Confidence 999999999999999999999999999999999975 468899998888899999999999999987 8999999
Q ss_pred EeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 248 ISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 248 vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
|++..+.... ...+..++++|+.+++|+|||||||.+|+||||+++...+.++..+++|+||++.+++++++|+++|
T Consensus 177 vs~~~r~~~~---~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g 253 (451)
T 3pv2_A 177 VSALKRSDLN---IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFG 253 (451)
T ss_dssp EEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHS
T ss_pred EeeccccccC---CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcC
Confidence 9988765111 1223567999999999999999999999999999998876666779999999999999999999999
Q ss_pred eecceecceeeec--chhhhhcCc----cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHH
Q 013804 328 KVTRPILGIKFAP--DQSVEQLGV----SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYR 401 (436)
Q Consensus 328 ~v~~~~lGv~~~~--~~~~~~~g~----~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~ 401 (436)
++.++|||+.+++ .+.++.+|+ .|++|..|.++|||+++||++ ||+|++|||++|.++.|+..
T Consensus 254 ~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~vnG~~v~~~~~l~~ 322 (451)
T 3pv2_A 254 SIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKA-----------GDIITQINDTKITQATQVKT 322 (451)
T ss_dssp SCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHH
T ss_pred CcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCC-----------CCEEEEECCEEcCCHHHHHH
Confidence 9999999999986 345677775 599999999999999999999 99999999999999999999
Q ss_pred HHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 013804 402 ILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 432 (436)
Q Consensus 402 ~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 432 (436)
++....+|++++|+|+|+|+++++++++.+.
T Consensus 323 ~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 353 (451)
T 3pv2_A 323 TISLLRVGSTVKIIVERDNKPLTLSAVVTDI 353 (451)
T ss_dssp HHHTSCTTCEEEEEEEETTEEEEEEEECBCH
T ss_pred HHHhcCCCCEEEEEEEECCEEEEEEEEEccC
Confidence 9998889999999999999999999988643
No 6
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=4.4e-49 Score=409.94 Aligned_cols=292 Identities=28% Similarity=0.427 Sum_probs=245.3
Q ss_pred HhCCceEEEEEeeeccCcccccccc-CcCeEEEEEEEcCCCEEEecccccCCCCeEEEEec-CCcEEeeEEEEEcCCCCe
Q 013804 124 ENTPSVVNITNLAARQDAFTLDVLE-VPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-DQSAYDAKIVGFDQDKDV 201 (436)
Q Consensus 124 ~~~~sVV~I~~~~~~~~~~~~~~~~-~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~-dg~~~~a~vv~~d~~~Dl 201 (436)
...+|||+|.+.....+.+.+|... ...+.||||+|+ +||||||+|||+++..+.|.+. |++.|+|++++.|+.+||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DL 123 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDI 123 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCE
Confidence 3458999999988777765555433 335889999998 6899999999999999999984 899999999999999999
Q ss_pred EEEEEcCCC--CCCcceecCCCCCCCCCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCC
Q 013804 202 AVLRIDAPK--DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (436)
Q Consensus 202 AlLkv~~~~--~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 278 (436)
||||++.+. ...+++.++ +.++.|++|+++|||++... +++.|+|+++.+.... .+.....+|++|+++++|+
T Consensus 124 AvLkv~~~~~~~~~~pl~~g--~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQtDAaInpGn 199 (539)
T 4fln_A 124 ALLSVESEDFWKGAEPLRLG--HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQIDAAINPGN 199 (539)
T ss_dssp EEEEECCSSSSTTCCCCCBC--CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEESSCCCTTT
T ss_pred EEEEEeCCcCCcCCceeecC--CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEEEeEecCCC
Confidence 999998643 234556665 34678999999999998765 8999999998876443 2233346799999999999
Q ss_pred CCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceec-ceecceeeecc---hhhhhcCc---cc
Q 013804 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT-RPILGIKFAPD---QSVEQLGV---SG 351 (436)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~-~~~lGv~~~~~---~~~~~~g~---~g 351 (436)
|||||||.+|+||||+++..... +..+++||||++.+++++++++++|++. |||||+.+++. ..++.+++ .|
T Consensus 200 SGGPLvn~~GeVIGIntai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~G 278 (539)
T 4fln_A 200 SGGPAFNDQGECIGVAFQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEG 278 (539)
T ss_dssp TTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBC
T ss_pred ccchhccCCCcEEEEEEEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCCcCc
Confidence 99999999999999999876533 3568999999999999999999999986 99999999863 34666776 79
Q ss_pred eEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHH----------HHHHHhcCCCCCEEEEEEEECCE
Q 013804 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD----------LYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 352 v~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~d----------l~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
++|.+|.+++||+++ |++ ||+|++|||++|.+..+ |..++..+++|++|+|+|+|+|+
T Consensus 279 v~V~~V~~~spA~~a-l~~-----------GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk 346 (539)
T 4fln_A 279 VLVRRVEPTSDASKV-LKE-----------GDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGE 346 (539)
T ss_dssp EEEEEECTTSGGGGT-CCT-----------TCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTE
T ss_pred eeeecccCCChHHhC-ccC-----------CCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 999999999999876 998 99999999999987654 77888888999999999999999
Q ss_pred EEEEEEEeecCC
Q 013804 422 KEKIPVKLEPKP 433 (436)
Q Consensus 422 ~~~~~v~~~~~~ 433 (436)
+++++|++.+++
T Consensus 347 ~~~v~Vtl~~~~ 358 (539)
T 4fln_A 347 HKKVQVVLRPRV 358 (539)
T ss_dssp EEEEEEECBCCC
T ss_pred EEEEEEEEccCc
Confidence 999999998765
No 7
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=4.7e-48 Score=383.15 Aligned_cols=291 Identities=35% Similarity=0.577 Sum_probs=248.8
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCC---------eEEEEecCCc
Q 013804 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---------DIRVTFADQS 186 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---------~i~V~~~dg~ 186 (436)
.++.++++++.||||.|..... ...+.||||+|+++||||||+||+.+.. .+.|++.+++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~-----------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~ 74 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG-----------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGR 74 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCC
T ss_pred ccHHHHHHHhcCcEEEEEEEcc-----------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCC
Confidence 3567899999999999987432 1257899999998899999999998875 7999999999
Q ss_pred EEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCC-C--CC
Q 013804 187 AYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT-G--RP 263 (436)
Q Consensus 187 ~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~-~--~~ 263 (436)
.++++++.+|+.+||||||++.+ ..++++.|+++..+..|++|+++|||.+....++.|.++...+....... + ..
T Consensus 75 ~~~a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~ 153 (324)
T 1y8t_A 75 TAPFTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNT 153 (324)
T ss_dssp EECEEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CC
T ss_pred EEEEEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccc
Confidence 99999999999999999999875 37899999877778999999999999988888899999987765432110 1 12
Q ss_pred cccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCC-------CCCCcceeeeeeeccchhhhhccccceecceecce
Q 013804 264 IQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPS-------GASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (436)
Q Consensus 264 ~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~-------~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv 336 (436)
...++++++.+|+|+|||||+|.+|+||||+++..... .+..+++|+||++.+++++++++++|++.++|||+
T Consensus 154 ~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi 233 (324)
T 1y8t_A 154 VLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 233 (324)
T ss_dssp CEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCE
T ss_pred cCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccce
Confidence 35789999999999999999999999999999876542 23468999999999999999999999999999999
Q ss_pred eeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 013804 337 KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEV 416 (436)
Q Consensus 337 ~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v 416 (436)
.+.... ...|++|..|.+++||+++||++ ||+|++|||++|.++.|+..++....+|++++|+|
T Consensus 234 ~~~~~~-----~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 297 (324)
T 1y8t_A 234 QVTNDK-----DTLGAKIVEVVAGGAAANAGVPK-----------GVVVTKVDDRPINSADALVAAVRSKAPGATVALTF 297 (324)
T ss_dssp EEESCS-----SSSSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEE
T ss_pred Eeeecc-----CCCceEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 997532 12689999999999999999999 99999999999999999999998777899999999
Q ss_pred EE-CCEEEEEEEEeecCCC
Q 013804 417 LR-GDQKEKIPVKLEPKPD 434 (436)
Q Consensus 417 ~R-~g~~~~~~v~~~~~~~ 434 (436)
+| +|+.+++++++...+.
T Consensus 298 ~R~~g~~~~~~v~~~~~~~ 316 (324)
T 1y8t_A 298 QDPSGGSRTVQVTLGKAEQ 316 (324)
T ss_dssp ECSSCCEEEEEEECEEC--
T ss_pred EECCCCEEEEEEEEccCCC
Confidence 99 9999999999886653
No 8
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.1e-48 Score=402.75 Aligned_cols=300 Identities=38% Similarity=0.605 Sum_probs=255.5
Q ss_pred hHHHHHHHhCCceEEEEEeeecc-----C------cccccc--------------------------ccCcCeEEEEEEE
Q 013804 117 ATVRLFQENTPSVVNITNLAARQ-----D------AFTLDV--------------------------LEVPQGSGSGFVW 159 (436)
Q Consensus 117 ~~~~~~~~~~~sVV~I~~~~~~~-----~------~~~~~~--------------------------~~~~~~~GSGfiI 159 (436)
++.++++++.||||.|.+..... . .|.... .....+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 46789999999999998765421 1 111000 0011368999999
Q ss_pred cCC-CEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCC
Q 013804 160 DSK-GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (436)
Q Consensus 160 ~~~-G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g 238 (436)
+++ ||||||+||+.++..+.|++.|++.++|++++.|+.+||||||++.+ ..+++++|+++..+++|++|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCCCCCEEEEEECCCC
Confidence 987 99999999999999999999999999999999999999999999854 3689999998888999999999999999
Q ss_pred CCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccch
Q 013804 239 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNG 318 (436)
Q Consensus 239 ~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~ 318 (436)
...+++.|+|++..+... ....+..++++|+.+++|+|||||+|.+|+||||+++.....++..+++|+||++.+++
T Consensus 173 ~~~tvt~Givs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~ 249 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGL---NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKN 249 (448)
T ss_dssp SSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHH
T ss_pred CCCeEEeEEEeecccccc---CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchh
Confidence 989999999998876511 11224578999999999999999999999999999988766556678999999999999
Q ss_pred hhhhccccceecceecceeeec--chhhhhcCc---cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEe
Q 013804 319 IVDQLVKFGKVTRPILGIKFAP--DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (436)
Q Consensus 319 ~l~~l~~~g~v~~~~lGv~~~~--~~~~~~~g~---~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V 393 (436)
++++++++|++.++|||+.+++ .+.++.+++ .|++|.+|.+++||+++||++ ||+|++|||++|
T Consensus 250 ~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~-----------GDvI~~inG~~v 318 (448)
T 1ky9_A 250 LTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPI 318 (448)
T ss_dssp HHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCT-----------TCEECBSSSSBC
T ss_pred hHHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCC-----------CCEEEEECCEEc
Confidence 9999999999999999999986 345677876 599999999999999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeec
Q 013804 394 SNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEP 431 (436)
Q Consensus 394 ~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 431 (436)
.++.|+..++...++|++++|+|+|+|+.+++++++.+
T Consensus 319 ~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 356 (448)
T 1ky9_A 319 SSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQ 356 (448)
T ss_dssp CSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---
T ss_pred CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEec
Confidence 99999999998877899999999999998888777643
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.1e-47 Score=380.59 Aligned_cols=292 Identities=33% Similarity=0.532 Sum_probs=237.5
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEE
Q 013804 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (436)
....++++++.||||.|+..... +|. ......+.||||+|+++||||||+||+.++..+.|++.+++.++++++.+
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 90 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRH--PFL--GREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAV 90 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEE--TTT--TEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEecC--ccC--CCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEE
Confidence 34678999999999999875421 221 11123478999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccC
Q 013804 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (436)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 275 (436)
|+.+||||||++.+. .+++++|+++..+..|++|+++|||.+....++.|+|+...+.............++++++.++
T Consensus 91 d~~~DlAllkl~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~ 169 (325)
T 1lcy_A 91 DPVADIATLRIQTKE-PLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAID 169 (325)
T ss_dssp ETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCS
T ss_pred CCCCCEEEEEEcCCC-CCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCC
Confidence 999999999998653 6889999877778999999999999998889999999877653221111112346799999999
Q ss_pred CCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc------ceecceecceeeecc--hhhhhc
Q 013804 276 PGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF------GKVTRPILGIKFAPD--QSVEQL 347 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~------g~v~~~~lGv~~~~~--~~~~~~ 347 (436)
+|+|||||+|.+|+||||+++... .+++|+||++.++++++++++. +.+.++|||+.+.+. ..++.+
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~ 244 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAEL 244 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHH
T ss_pred CCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhh
Confidence 999999999999999999998763 4689999999999999998775 467899999998752 234455
Q ss_pred Cc---------cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEE
Q 013804 348 GV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLR 418 (436)
Q Consensus 348 g~---------~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R 418 (436)
++ .|++|.+|.+++||+++||++ ||+|++|||++|.+++|+.+++.. +++++|+|.|
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GDvI~~ing~~v~~~~~l~~~l~~---~~~v~l~v~R 310 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIRR 310 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHHTT---CSSEEEEEEE
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHhC---CCeEEEEEEE
Confidence 43 599999999999999999999 999999999999999999999875 5789999999
Q ss_pred CCEEEEEEEEeec
Q 013804 419 GDQKEKIPVKLEP 431 (436)
Q Consensus 419 ~g~~~~~~v~~~~ 431 (436)
+|+.+++++++..
T Consensus 311 ~g~~~~~~v~~~~ 323 (325)
T 1lcy_A 311 GRETLTLYVTPEV 323 (325)
T ss_dssp TTEEEEEEECCEE
T ss_pred CCEEEEEEEEEec
Confidence 9999999988753
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.2e-47 Score=381.56 Aligned_cols=296 Identities=32% Similarity=0.530 Sum_probs=159.8
Q ss_pred cchhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEE
Q 013804 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (436)
Q Consensus 114 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv 193 (436)
...+..++++++.||||.|...... +| +......+.||||+|+++||||||+||+.++..+.|.+.+++.++++++
T Consensus 12 ~~~~~~~~~~~~~~sVV~I~~~~~~--~~--~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~~~ 87 (332)
T 3num_A 12 KYNFIADVVEKIAPAVVHIELFRKL--PF--SKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIK 87 (332)
T ss_dssp HHCHHHHHHHHHGGGEEEEEEEEEC--TT--SSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEEEE
T ss_pred ccchHHHHHHHhcCcEEEEEEEecc--cc--CCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEEEE
Confidence 3355678999999999999885431 11 1222345789999999999999999999999999999999999999999
Q ss_pred EEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 013804 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (436)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~ 273 (436)
..|+.+||||||++.+. .++++.++++..+..|++|+++|||.+...+.+.|.++...+.............++++++.
T Consensus 88 ~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~~ 166 (332)
T 3num_A 88 DVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAI 166 (332)
T ss_dssp EEETTTTEEEEEECCSS-CCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEESSC
T ss_pred EecCCCCeEEEEEcCCC-CCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEECC
Confidence 99999999999998753 68888998777889999999999999988899999998776643322112223467899999
Q ss_pred cCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc---c--ceecceecceeeecch--hhhh
Q 013804 274 INPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK---F--GKVTRPILGIKFAPDQ--SVEQ 346 (436)
Q Consensus 274 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~---~--g~v~~~~lGv~~~~~~--~~~~ 346 (436)
+++|+|||||+|.+|+||||+++... .+++|+||++.++++++++++ . +.+.++|||+.+.+.. .++.
T Consensus 167 i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~~~ 241 (332)
T 3num_A 167 INYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAKE 241 (332)
T ss_dssp CCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC----------------------------
T ss_pred cCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHhhh
Confidence 99999999999999999999998764 478999999999999999864 2 3457899999987522 2222
Q ss_pred cC---------ccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 013804 347 LG---------VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVL 417 (436)
Q Consensus 347 ~g---------~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~ 417 (436)
++ ..|++|.+|.++|||+++||++ ||+|++|||++|.+++|+..++.. |++++|+|.
T Consensus 242 ~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~v~ 307 (332)
T 3num_A 242 LKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKE-----------NDVIISINGQSVVSANDVSDVIKR---ESTLNMVVR 307 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhccccCCCCCceEEEEeccCCChHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhC---CCeEEEEEE
Confidence 21 2699999999999999999999 999999999999999999988864 788999999
Q ss_pred ECCEEEEEEEEeecCC
Q 013804 418 RGDQKEKIPVKLEPKP 433 (436)
Q Consensus 418 R~g~~~~~~v~~~~~~ 433 (436)
|+|+++++++++..++
T Consensus 308 R~g~~~~~~v~p~~~~ 323 (332)
T 3num_A 308 RGNEDIMITVIPEEID 323 (332)
T ss_dssp ----------------
T ss_pred ECCEEEEEEEEEeeec
Confidence 9999999999887554
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=6.6e-38 Score=297.01 Aligned_cols=219 Identities=41% Similarity=0.679 Sum_probs=171.4
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC--------cccccc-------ccCc-CeEEEEEEEcCCCEEEecccccCCCCeEEE
Q 013804 117 ATVRLFQENTPSVVNITNLAARQD--------AFTLDV-------LEVP-QGSGSGFVWDSKGHVVTNYHVIRGASDIRV 180 (436)
Q Consensus 117 ~~~~~~~~~~~sVV~I~~~~~~~~--------~~~~~~-------~~~~-~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V 180 (436)
++.++++++.||||.|.+...... +|..+. .... .+.||||+|+++||||||+||+.++..+.|
T Consensus 5 ~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~V 84 (239)
T 1l1j_A 5 PIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITV 84 (239)
T ss_dssp HHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCEE
T ss_pred hHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEEE
Confidence 567899999999999998654321 110000 1112 578999999988999999999999999999
Q ss_pred EecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCC
Q 013804 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (436)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~ 260 (436)
.+.+++.++++++..|+.+||||||++.+...++++.|+++..+++|++|+++|||.+...+++.|+|++..+.......
T Consensus 85 ~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~~ 164 (239)
T 1l1j_A 85 TMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDG 164 (239)
T ss_dssp ECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTTS
T ss_pred EECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCCC
Confidence 99999999999999999999999999875347899999877778999999999999998889999999988776432211
Q ss_pred CCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceecceecce
Q 013804 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (436)
Q Consensus 261 ~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv 336 (436)
...+..++++|+.+|+|+|||||+|.+|+||||+++... .++..+++|+||++.+++++++|+++|++.|+|||+
T Consensus 165 ~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~~lGv 239 (239)
T 1l1j_A 165 SGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239 (239)
T ss_dssp SCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred ccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHCCCCccceeCc
Confidence 112356889999999999999999999999999998765 334568999999999999999999999999999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=4.7e-37 Score=291.90 Aligned_cols=213 Identities=40% Similarity=0.654 Sum_probs=163.2
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC------c----ccc---c-cccCcCeEEEEEEEcCC-CEEEecccccCCCCeEEEE
Q 013804 117 ATVRLFQENTPSVVNITNLAARQD------A----FTL---D-VLEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (436)
Q Consensus 117 ~~~~~~~~~~~sVV~I~~~~~~~~------~----~~~---~-~~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (436)
++.++++++.||||.|.+...... . |.. + ......+.||||+|+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~ 93 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEE
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEE
Confidence 467899999999999988754431 1 110 0 01122578999999998 9999999999999999999
Q ss_pred ecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCC
Q 013804 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (436)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~ 261 (436)
+.|++.++++++..|+.+||||||++.+. .+++++|+++..+++|++|+++|||++...+++.|+|+...+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~---~~ 169 (245)
T 3sti_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (245)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSS---CC
T ss_pred ECCCCEEEEEEEEecCCCCEEEEEeccCC-CCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 99999999999999999999999997643 789999988778999999999999999999999999998766411 11
Q ss_pred CCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceeccee
Q 013804 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPI 333 (436)
Q Consensus 262 ~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~ 333 (436)
..+..++++|+.+++|+|||||||.+|+||||+++.....++..+++||||++.+++++++|+++|++.++|
T Consensus 170 ~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~~~~ 241 (245)
T 3sti_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEILEHH 241 (245)
T ss_dssp TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC---
T ss_pred CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCCCcc
Confidence 223567999999999999999999999999999998876666779999999999999999999999987665
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=3.7e-35 Score=278.03 Aligned_cols=214 Identities=37% Similarity=0.554 Sum_probs=178.3
Q ss_pred cchhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEE
Q 013804 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (436)
Q Consensus 114 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv 193 (436)
...++.++++++.+|||.|......... .......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++
T Consensus 18 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv 94 (237)
T 3lgi_A 18 TPASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLV 94 (237)
T ss_dssp CCCBCHHHHHHHGGGEEEEEEECCTTTC---TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEE
T ss_pred CCcCHHHHHHHhCCcEEEEEEEecccCc---ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEE
Confidence 3446678999999999999987544321 1111235789999999999999999999999999999999999999999
Q ss_pred EEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 013804 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (436)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~ 273 (436)
..|+.+||||||++.+. .+++++|+++..+..|+.|+++|||.+....++.|.|+...+..... .....++++++.
T Consensus 95 ~~d~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~---~~~~~~i~~d~~ 170 (237)
T 3lgi_A 95 GSDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP---TGRQNFLQTDAS 170 (237)
T ss_dssp EEETTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT---TSCSCCEEECSC
T ss_pred EEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC---CCcCCEEEEcCc
Confidence 99999999999998653 58889998777889999999999999988899999998776653221 223467899999
Q ss_pred cCCCCCCCeEECCCCcEEEEEeeeecCCC---CCCcceeeeeeeccchhhhhccccceecceec
Q 013804 274 INPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPIL 334 (436)
Q Consensus 274 i~~G~SGGPlvd~~G~VVGI~s~~~~~~~---~~~~~~~aIP~~~i~~~l~~l~~~g~v~~~~l 334 (436)
+++|+|||||||.+|+||||+++.+.... ...+++|+||++.+++++++|+++|+..++++
T Consensus 171 i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 171 INHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp CCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred cCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 99999999999999999999999776533 35689999999999999999999999877654
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=1.2e-33 Score=266.51 Aligned_cols=200 Identities=37% Similarity=0.587 Sum_probs=163.2
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEE
Q 013804 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (436)
....++++++.||||.|...... +|. ......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++..
T Consensus 31 ~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~v~~~ 106 (231)
T 3tjo_A 31 NFIADVVEKIAPAVVHIELFRKL--PFS--KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDV 106 (231)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEC--TTS--SCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEEEEEE
T ss_pred hHHHHHHHHhcCcEEEEEEEecc--ccC--CCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEEEEEe
Confidence 45668999999999999986532 111 11122478999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccC
Q 013804 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (436)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 275 (436)
|+.+||||||++.+. .++++.|+++..+..|+.|+++|||.+.....+.|.++...+.............++++++.++
T Consensus 107 d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~ 185 (231)
T 3tjo_A 107 DEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIIN 185 (231)
T ss_dssp ETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEESSCCC
T ss_pred cCCCCEEEEEecCCC-CCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEcCCcC
Confidence 999999999998653 6888999877778999999999999988888899999877664332211222346789999999
Q ss_pred CCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 276 PGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+|+|||||||.+|+||||+++... .+++|+||++.++++++++++
T Consensus 186 ~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 186 YGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp TTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHHHHHHHHHHhh
Confidence 999999999999999999999763 478999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=2.1e-30 Score=245.27 Aligned_cols=198 Identities=28% Similarity=0.423 Sum_probs=161.9
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEE
Q 013804 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (436)
Q Consensus 116 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (436)
.+..++++++.+|||+|......+. ..+.||||+|+ +||||||+||+.+...+.|.+.+ +.++++++..
T Consensus 31 ~~~~~~~~~~~~svV~I~~~~~~~~---------~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~-~~~~~~~v~~ 99 (237)
T 3k6y_A 31 LVNNPVVAATEPSVVKIRSLAPRCQ---------KVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGD-KPFEATVVSY 99 (237)
T ss_dssp GGGCHHHHHHGGGEEEEEEEEGGGT---------EEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETT-EEEECEEEEE
T ss_pred cccHHHHHHhcCCEEEEEEEecCCC---------cceeEEEEEEE-CCEEEECHHHcCCCceEEEEECC-cEEEEEEEEE
Confidence 3445789999999999988653221 25689999999 67999999999999999999988 4899999999
Q ss_pred cCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCC--CCC-CcccEEEEcc
Q 013804 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA--TGR-PIQDVIQTDA 272 (436)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~--~~~-~~~~~i~~~~ 272 (436)
|+.+||||||++. ..++++.|+ +..+..|+.|+++|||++.......|.++...+...... ... ....++++++
T Consensus 100 ~~~~DiAll~l~~--~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 100 DPSVDVAILAVPH--LPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp ETTTTEEEEECTT--CCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred cCCCCEEEEEeCC--CCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 9999999999984 468889997 567889999999999998888888888876554332211 111 2346789999
Q ss_pred ccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccceec
Q 013804 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT 330 (436)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~v~ 330 (436)
.+++|+|||||+|.+|+||||+++.... ..+++|+||++.++++++++.....+.
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999987543 347899999999999999996655553
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.90 E-value=1.2e-22 Score=180.66 Aligned_cols=128 Identities=20% Similarity=0.327 Sum_probs=100.5
Q ss_pred cCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCE
Q 013804 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQK 229 (436)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~ 229 (436)
..+.||||+| +|+||||+||++++..+.|++ |++.++++++ .|+..||||||++.....+++++++++.. .++
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSC 91 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTE
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCE
Confidence 3679999999 689999999999999999999 9999999999 89999999999986443455667765432 489
Q ss_pred EEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeee
Q 013804 230 VYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (436)
Q Consensus 230 V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (436)
|+++|||.+. . .++...... ....+.+++.+++|+|||||||.+|+||||++...
T Consensus 92 v~~~G~p~~~---~---~~s~~~~~~--------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~ 146 (163)
T 2w5e_A 92 VTVMAYVNED---L---VVSTAAAMV--------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT 146 (163)
T ss_dssp EEEEEEETTE---E---EEEEEEEEE--------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE
T ss_pred EEEEEeCCCC---E---EEEEeccEE--------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc
Confidence 9999999652 1 111111111 12346778999999999999999999999998754
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.89 E-value=5.4e-23 Score=190.74 Aligned_cols=180 Identities=23% Similarity=0.412 Sum_probs=133.6
Q ss_pred CCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCC---eEEEEe----cCCcEEeeE-EEEEcC
Q 013804 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYDAK-IVGFDQ 197 (436)
Q Consensus 126 ~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~a~-vv~~d~ 197 (436)
.+++|+|.. ...-||.... ..+.|+||+|++ +||||||||+.+.. .+.|.+ .+++.++++ ++.+++
T Consensus 2 ~~~~~~i~~--~~~~P~~v~~---~~~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~ 75 (210)
T 2as9_A 2 EKNVTQVKD--TNNFPYNGVV---SFKDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPG 75 (210)
T ss_dssp CCCEEECSC--TTSTTGGGEE---ECSSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSS
T ss_pred CCceEEeec--CCcCCeEEEE---EeeeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCC
Confidence 346677743 2233444322 246799999996 59999999997653 566654 467888885 778888
Q ss_pred CCCeEEEEEcCCC-----------CCCcceecCCCCCCCCCCEEEEEecCCCCCCc----eeEeEEeeeeeeeccCCCCC
Q 013804 198 DKDVAVLRIDAPK-----------DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGR 262 (436)
Q Consensus 198 ~~DlAlLkv~~~~-----------~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~----~~~G~vs~~~~~~~~~~~~~ 262 (436)
.+||||||++.+. ..++++.|. ..+..|+.++++|||.+.... +..|.++...
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~---------- 143 (210)
T 2as9_A 76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK---------- 143 (210)
T ss_dssp SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE----------
T ss_pred CCcEEEEEecCccccccccccccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc----------
Confidence 9999999998631 135677774 457889999999999865433 3566665431
Q ss_pred CcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 263 PIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 263 ~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
...+++++.+|+|+|||||+|.+|+||||++++....+ ....+|++|.+.|++|+++..+.
T Consensus 144 --~~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~-~~~~~~~~~~~~i~~f~~~~~~~ 204 (210)
T 2as9_A 144 --DNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIG-SEYNGAVYFTPQIKDFIQKHIEQ 204 (210)
T ss_dssp --TTEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTT-CSSEEEEECCHHHHHHHHTTCCC
T ss_pred --CCeEEEcCccCCCCccCcEECCCCeEEEEEecccccCC-ccccccEEEcHHHHHHHHHhhhh
Confidence 24577889999999999999989999999999876543 45678999999999999987654
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.87 E-value=6.5e-22 Score=187.27 Aligned_cols=161 Identities=26% Similarity=0.440 Sum_probs=119.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCe--EEEEecCC-------------cEEeeEEEEEcC---CCCeEEEEEcCCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASD--IRVTFADQ-------------SAYDAKIVGFDQ---DKDVAVLRIDAPKD- 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~--i~V~~~dg-------------~~~~a~vv~~d~---~~DlAlLkv~~~~~- 211 (436)
.+.|+||+|++ +||||||||+.+... +.|.+.+| +.+.++.+..|+ .+||||||++.+..
T Consensus 54 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~ 132 (242)
T 1agj_A 54 QTSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNG 132 (242)
T ss_dssp TEEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcc
Confidence 46899999986 599999999976543 34444332 357888888888 88999999987631
Q ss_pred -----CCcceecCCCCCCCCCCEEEEEecCCCCCCc-eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEEC
Q 013804 212 -----KLRPIPIGVSADLLVGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (436)
Q Consensus 212 -----~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd 285 (436)
.++++.|+....+..|+.++++|||.+.... .....+... . ....+++++.+|+|+|||||++
T Consensus 133 ~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~-----~------~~~~~~~~~~~c~GdSGGPl~~ 201 (242)
T 1agj_A 133 VSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT-----T------LSRGLRYYGFTVPGNSGSGIFN 201 (242)
T ss_dssp CCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC-----C------GGGSEEEECCCCGGGTTCEEEC
T ss_pred ccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe-----c------CCceEEEeCCcCCCCCchHhcc
Confidence 3788889766667899999999999775532 222222111 0 1123567889999999999999
Q ss_pred CCCcEEEEEeeeecCCCCCCcceeeeeee-ccchhhhhc
Q 013804 286 SSGSLIGINTAIYSPSGASSGVGFSIPVD-TVNGIVDQL 323 (436)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIP~~-~i~~~l~~l 323 (436)
.+|+||||++++....+...+.+|++|++ .+++++++.
T Consensus 202 ~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 202 SNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp TTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred cCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 89999999999876433456789999996 788887763
No 19
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.85 E-value=6.3e-21 Score=164.33 Aligned_cols=117 Identities=35% Similarity=0.576 Sum_probs=106.4
Q ss_pred Ccceeeeeeeccchhhhhccccceecceecceeeecc-----hhhhhcCc-----cceEEEecCCCCcccccCccccccc
Q 013804 305 SGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPD-----QSVEQLGV-----SGVLVLDAPPNGPAGKAGLLSTKRD 374 (436)
Q Consensus 305 ~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~~-----~~~~~~g~-----~gv~V~~v~~~spa~~agl~~~~~~ 374 (436)
+|++||||++.+++++++|+++|++.++|||+.+.+. ..++.+|+ .|++|..|.++|||+ +||++
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~---- 76 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEK---- 76 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCS----
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCC----
Confidence 5789999999999999999999999999999998863 34556765 689999999999999 99999
Q ss_pred ccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 013804 375 AYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 433 (436)
Q Consensus 375 ~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 433 (436)
||+|++|||++|.++.++..++...++|++++++|.|+|+.+++++++.+.|
T Consensus 77 -------GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 77 -------YDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp -------SCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred -------CCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 9999999999999999999999987789999999999999999999998765
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.83 E-value=1.1e-20 Score=173.55 Aligned_cols=156 Identities=24% Similarity=0.400 Sum_probs=111.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCe----EEEEe----cCCcEEee-EEEEEcCCCCeEEEEEcCCC-------CCCcc
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASD----IRVTF----ADQSAYDA-KIVGFDQDKDVAVLRIDAPK-------DKLRP 215 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~----~dg~~~~a-~vv~~d~~~DlAlLkv~~~~-------~~~~~ 215 (436)
+.|+||+|++ +||||||||+.+... +.+.. .+++.+.+ +++.+++.+||||||++.+. ..+++
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~p 100 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSY 100 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCC
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccc
Confidence 5799999996 599999999975433 55543 46677887 47788889999999998641 14667
Q ss_pred eecCCCCCCCCCCEEEEEecCCCCCCc----eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEE
Q 013804 216 IPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLI 291 (436)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~~~----~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VV 291 (436)
+.|. ..+..|+.++++|||++.... +..|.++... ...+++++.+|+|+|||||+|.+|+||
T Consensus 101 i~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g~lv 166 (200)
T 2w7s_A 101 TKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSKHELI 166 (200)
T ss_dssp CCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTTSCEE
T ss_pred eecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcCCEEE
Confidence 7774 357789999999999764322 3556655321 245678899999999999999899999
Q ss_pred EEEeeeecCCCCCCcceeee-eeeccchhhhhcc
Q 013804 292 GINTAIYSPSGASSGVGFSI-PVDTVNGIVDQLV 324 (436)
Q Consensus 292 GI~s~~~~~~~~~~~~~~aI-P~~~i~~~l~~l~ 324 (436)
||++++...+ ....+|++ ....+++|+++.+
T Consensus 167 GI~s~g~~~~--~~~~~~~v~~~~~~~~wI~~~~ 198 (200)
T 2w7s_A 167 GILYAGSGKD--ESEKNFGVYFTPQLKEFIQNNI 198 (200)
T ss_dssp EEEEEEC------CCCEEEEECCHHHHHHHHHTS
T ss_pred EEEeccccCC--CCccceeeecHHHHHHHHHhhc
Confidence 9999986431 12234444 3366777777654
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.83 E-value=2.1e-19 Score=173.37 Aligned_cols=159 Identities=19% Similarity=0.303 Sum_probs=115.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCe----EEEEec--------CCcEEeeEEEEEcCCCCeEEEEEcCCC------CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASD----IRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (436)
.+.|+||||+++ ||||||||+.+... +.|+++ +++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (274)
T 2o8l_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (274)
T ss_dssp EEEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTS
T ss_pred CEEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccc
Confidence 468999999976 99999999976543 777653 344444556677778999999998652 35
Q ss_pred CcceecCCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCc
Q 013804 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (436)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~ 289 (436)
++++.|.....+..|+.++++|||.+.... ...|.+.... ...++.++.+|+|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (274)
T 2o8l_A 112 VKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (274)
T ss_dssp SCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESCCCCTTCTTCEEECTTSC
T ss_pred cccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------CCeEEeCcccCCCCchhheeccCCe
Confidence 788888765567889999999999765322 2344443221 2457788999999999999998999
Q ss_pred EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
||||++++.... .+.++++. ..+++|+++.++.
T Consensus 180 lvGIvS~G~~~~---~~~~~~~~-~~~~~wI~~~i~~ 212 (274)
T 2o8l_A 180 VIGIHWGGVPNE---FNGAVFIN-ENVRNFLKQNIED 212 (274)
T ss_dssp EEEEEEEEETTT---EEEEEECC-HHHHHHHHHHCTT
T ss_pred EEEEEeCcccCC---CCceEEec-HHHHHHHHHHHhh
Confidence 999999986532 23455553 5667777766553
No 22
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.82 E-value=1.1e-19 Score=166.86 Aligned_cols=157 Identities=20% Similarity=0.227 Sum_probs=121.3
Q ss_pred EEEEEEcCC--CEEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcCCCCCCcce-------ecCCCCC
Q 013804 154 GSGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPI-------PIGVSAD 223 (436)
Q Consensus 154 GSGfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~-------~l~~~~~ 223 (436)
.+||++.++ ++||||+||+++...+. .|+ .+.++++..+ +..|+||||++.+....+.+ .+.....
T Consensus 18 T~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~~-~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~~ 93 (198)
T 2h5c_A 18 SVGFSVTRGATKGFVTAGHCGTVNATAR---IGG-AVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGSTE 93 (198)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTTCEEE---ETT-EEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCCC
T ss_pred CcCEEEecCCeeEEEECcccCCCCCEEE---eCC-cEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCccc
Confidence 479999653 68999999999888765 454 7889999999 99999999998643112222 3455677
Q ss_pred CCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeee-cC--
Q 013804 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY-SP-- 300 (436)
Q Consensus 224 ~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~-~~-- 300 (436)
+++|++|+.+|+|.+ .+.|+|+++.+..... . ..+..++++++.+.+|+|||||+|.+|++|||+++.. ..
T Consensus 94 ~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~-~-g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~ 167 (198)
T 2h5c_A 94 AAVGAAVCRSGRTTG----YQCGTITAKNVTANYA-E-GAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNG 167 (198)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTS
T ss_pred CCCCCeEEEeecCcc----eEEEEEEeeeeEEEeC-C-CeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCC
Confidence 899999999999876 6899999888765421 1 1245689999999999999999999999999999974 21
Q ss_pred --CC--CCCcceeeeeeeccchhh
Q 013804 301 --SG--ASSGVGFSIPVDTVNGIV 320 (436)
Q Consensus 301 --~~--~~~~~~~aIP~~~i~~~l 320 (436)
|. ...+++|++|++.+++.+
T Consensus 168 ~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 168 NNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp BSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CccccccCCceEEEEEHHHHHHHC
Confidence 10 234789999998876654
No 23
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.81 E-value=5.7e-19 Score=169.76 Aligned_cols=159 Identities=20% Similarity=0.299 Sum_probs=115.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC----eEEEEec--------CCcEEeeEEEEEcCCCCeEEEEEcCCC------CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~----~i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (436)
.+.|+||||+++ ||||||||+.+.. .+.|+++ +++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (268)
T 1wcz_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (268)
T ss_dssp EEEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHH
T ss_pred CEEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccc
Confidence 468999999876 9999999997644 3777653 344444556677778999999998753 13
Q ss_pred CcceecCCCCCCCCCCEEEEEecCCCCCC---ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCc
Q 013804 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (436)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~---~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~ 289 (436)
+.++.|.....+..|+.++++|||.+... ....+.+.... ...++.++.+|.|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (268)
T 1wcz_A 112 VKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (268)
T ss_dssp SCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESBCCCTTCTTCEEECTTSC
T ss_pred cceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------CCeEEEecccCCCCccCeEEccCCE
Confidence 67888876556788999999999976432 22344443221 2457788999999999999998999
Q ss_pred EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
||||++++... . .+.++++. ..+++|+++.++.
T Consensus 180 lvGIvS~G~~~-~--~~~~~~~~-~~~~~wI~~~i~~ 212 (268)
T 1wcz_A 180 VIGIHWGGVPN-E--FNGAVFIN-ENVRNFLKQNIED 212 (268)
T ss_dssp EEEEEEEEETT-T--EEEEEECC-HHHHHHHHHHCTT
T ss_pred EEEEEeCCccC-C--cceeEEcC-HHHHHHHHHHHHh
Confidence 99999998653 2 23455554 5677788766543
No 24
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.81 E-value=2.5e-19 Score=164.56 Aligned_cols=157 Identities=23% Similarity=0.419 Sum_probs=109.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC---eEEEEe----cCCcEEe-eEEEEEcCCCCeEEEEEcCCC-----------CC
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYD-AKIVGFDQDKDVAVLRIDAPK-----------DK 212 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~-a~vv~~d~~~DlAlLkv~~~~-----------~~ 212 (436)
+.|+||+|+++ ||||||||+.+.. .+.+.. .++..+. .+++.+++.+||||||++.+. ..
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 100 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDN 100 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHH
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccccccccccccc
Confidence 57999999976 9999999998755 455432 3456676 456677778999999998531 12
Q ss_pred CcceecCCCCCCCCCCEEEEEecCCCCCC----ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCC
Q 013804 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSG 288 (436)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G 288 (436)
+.++.|.. .+..|+.++++|||.+... ....|.++... ...+..++..|+|+|||||++.+|
T Consensus 101 v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g 166 (204)
T 2vid_A 101 VTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPVLNSNN 166 (204)
T ss_dssp CCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEEECTTS
T ss_pred ccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcEECCCC
Confidence 46677753 5778999999999976543 23445554321 245778889999999999999899
Q ss_pred cEEEEEeeeecCCCCCCcceeee-eeeccchhhhhcc
Q 013804 289 SLIGINTAIYSPSGASSGVGFSI-PVDTVNGIVDQLV 324 (436)
Q Consensus 289 ~VVGI~s~~~~~~~~~~~~~~aI-P~~~i~~~l~~l~ 324 (436)
+||||++++...++ ....+|.+ +...+++|+++.+
T Consensus 167 ~lvGI~s~g~~~~~-~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 167 ELVGIHFASDVKND-DNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp CEEEEEEEECC----CCCCEEEECCCHHHHHHHHHHS
T ss_pred eEEEEEecCccCCC-cccccceeEeCHHHHHHHHhhc
Confidence 99999999864211 12334433 3366777777654
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.80 E-value=7.9e-20 Score=173.49 Aligned_cols=144 Identities=24% Similarity=0.350 Sum_probs=106.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC----eEEEEecC------------CcEEeeEEEEEcC---CCCeEEEEEcCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFAD------------QSAYDAKIVGFDQ---DKDVAVLRIDAPKD 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~----~i~V~~~d------------g~~~~a~vv~~d~---~~DlAlLkv~~~~~ 211 (436)
.+.|+||+|+++ ||||||||+.+.. .+.+..+. ...+.++.+..|+ .+||||||++.+..
T Consensus 47 ~~~c~G~lI~~~-~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 47 STLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CceEEEEEEECC-EEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 578999999975 9999999997654 36665532 1468888888888 89999999987531
Q ss_pred ------CCcceecCCCCCCCCCCEEEEEecCCCCCCce-eEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEE
Q 013804 212 ------KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-TTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (436)
Q Consensus 212 ------~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~-~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlv 284 (436)
.++++.|+....+..|+.++++|||.+..... ....+. ... .+++++.+|+|+|||||+
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~-------~~~-------~~~~~~~~~~GdSGGPlv 191 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIE-------MFN-------DSQYFGYTEVGNSGSGIF 191 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEE-------ESS-------SSBEESCCCGGGTTCEEE
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeee-------ecC-------cEEEeCCCCCCCchhheE
Confidence 37788887666678999999999998765421 111111 000 123456889999999999
Q ss_pred CCCCcEEEEEeeeecCCCCCCcceeeeeeeccc
Q 013804 285 DSSGSLIGINTAIYSPSGASSGVGFSIPVDTVN 317 (436)
Q Consensus 285 d~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~ 317 (436)
|.+|+||||++++.. ++++|++.+.
T Consensus 192 ~~~g~lvGI~s~g~~--------~~~ipi~~~~ 216 (246)
T 1qtf_A 192 NLKGELIGIHSGKGG--------QHNLPIGVFF 216 (246)
T ss_dssp CTTCCEEEEEEEEET--------TTTEEEEEET
T ss_pred CCCCEEEEEEecccc--------Cccccchhhh
Confidence 989999999998742 4778876554
No 26
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.78 E-value=9.4e-19 Score=158.81 Aligned_cols=164 Identities=24% Similarity=0.340 Sum_probs=118.9
Q ss_pred CeEEE-EEEEcC--CCEEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcC-CC---CCCcceecCCCC
Q 013804 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDA-PK---DKLRPIPIGVSA 222 (436)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~-~~---~~~~~~~l~~~~ 222 (436)
.+.|| ||++.. ++|||||+||+.+...+.+...++..+ +++...+ +.+||||||++. +. ..++++.+....
T Consensus 11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 11 TGRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp SCEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 35677 999964 369999999999988877765554443 4556666 889999999987 32 123566775455
Q ss_pred CCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCC
Q 013804 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSG 302 (436)
Q Consensus 223 ~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 302 (436)
.+..|+.++++||+.+ .+.+.++.+...... .....+...++.+..+|+|+|||||++.+ ++|||++++...+.
T Consensus 90 ~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~~-~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG----THSGSVTALNATVNY-GGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEC-STTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc----eeEeEEEEEEEEEEc-CCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCCC
Confidence 6788999999999753 457777766654321 11111234567778889999999999864 99999999865433
Q ss_pred CCCcceeeeeeeccchhhhh
Q 013804 303 ASSGVGFSIPVDTVNGIVDQ 322 (436)
Q Consensus 303 ~~~~~~~aIP~~~i~~~l~~ 322 (436)
....+++.|+..+++|++.
T Consensus 164 -~~~p~vyt~v~~~~~wI~~ 182 (185)
T 2qa9_E 164 -SGGTTFFQPVTEALSAYGV 182 (185)
T ss_dssp -TEEEEEEEEHHHHHHHHTC
T ss_pred -CCCcEEEEEHHHHHHhhCc
Confidence 4467899999998888764
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.78 E-value=2.4e-18 Score=156.63 Aligned_cols=159 Identities=19% Similarity=0.276 Sum_probs=117.6
Q ss_pred eEEE-EEEEcCC--CEEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcCCCCCCccee--------cC
Q 013804 152 GSGS-GFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPIP--------IG 219 (436)
Q Consensus 152 ~~GS-GfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~~--------l~ 219 (436)
..|| ||+++++ +|||||+||+.+...+. ..++....+++...+ +..|+||||++.+....+.+. +.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~ 89 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDIS 89 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECC
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeec
Confidence 4554 9999875 48999999999887654 456654546666555 788999999986432223333 33
Q ss_pred CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 220 ~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
.+..+++|++|+++|++.+ .+.|+|+++.+..... ......++++++.+++|+|||||++. +++|||+++...
T Consensus 90 ~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~--~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~ 162 (187)
T 1hpg_A 90 SAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYG--DGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSG 162 (187)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET--TEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESC
T ss_pred cccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeC--CCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCC
Confidence 4567899999999999865 6889999888765321 11245688999999999999999986 599999998754
Q ss_pred CCCCCCcceeeeeeeccchhh
Q 013804 300 PSGASSGVGFSIPVDTVNGIV 320 (436)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~l 320 (436)
.+. ..+.+|++|++.+++.+
T Consensus 163 ~~~-~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 163 CSG-TAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CBT-TBCCCEEEEHHHHHHHH
T ss_pred CCC-CCCceEEEEHHHHHHHc
Confidence 343 35688999998776544
No 28
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.77 E-value=4.9e-18 Score=154.59 Aligned_cols=156 Identities=18% Similarity=0.236 Sum_probs=117.8
Q ss_pred eEEEEEEEc-CCC--EEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcCCCCCCcc---------eec
Q 013804 152 GSGSGFVWD-SKG--HVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP---------IPI 218 (436)
Q Consensus 152 ~~GSGfiI~-~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~---------~~l 218 (436)
.-.+||++. ++| +||||+||+.+...+ ...| +.++++..| +..|+||||++.+....+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 345899995 478 999999999766554 3455 889999999 9999999999864311222 346
Q ss_pred CCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeee
Q 013804 219 GVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (436)
Q Consensus 219 ~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (436)
..+..+++|++|+.+|++.+ .+.|+|+++.+..... . .....+++++..+.+|+|||||+ .+|++|||+++..
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~-~-~~~~~~~~~~~~~~~GDSGgpl~-~~~~~vGi~s~~~ 161 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYP-Q-GTVHSLTRTSVCAEPGDSGGSFI-SGTQAQGVTSGGS 161 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEE-ETTEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeC-C-CcEeeeEeeeeecCCCCccceEE-ECCEEEEEEeccC
Confidence 66677899999999999876 5789999888765321 1 12345678888888999999999 4889999999876
Q ss_pred cCCCCCCcceeeeeeeccchhh
Q 013804 299 SPSGASSGVGFSIPVDTVNGIV 320 (436)
Q Consensus 299 ~~~~~~~~~~~aIP~~~i~~~l 320 (436)
..+. ..+++|++|++.+.+.+
T Consensus 162 ~~~~-~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 162 GNCR-TGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp EETT-TEEEEEEEESHHHHHHT
T ss_pred CCCC-CCCceEEEEHHHHHHHc
Confidence 4333 34679999987766543
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.72 E-value=4.3e-17 Score=148.42 Aligned_cols=150 Identities=22% Similarity=0.341 Sum_probs=112.6
Q ss_pred EEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcCCCCCCc--------ceecCCCCCC
Q 013804 154 GSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGVSADL 224 (436)
Q Consensus 154 GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~~~l~~~~~~ 224 (436)
-+||+++. +||||+||+++...+. ..| ++++..| +..|+||||++.+....+ ++.+..+..+
T Consensus 18 T~Gf~~~~--~ilTa~Hc~~~~~~v~--~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~ 88 (189)
T 2ea3_A 18 SIGFAVNG--GFITAGHCGRTGATTA--NPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAA 88 (189)
T ss_dssp ECCEEETT--EEEECGGGCCTTCEEE--TTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCC
T ss_pred ccCEEccC--eEEEchhcCCCCCEEE--eCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcCC
Confidence 36899963 9999999999877643 344 7788888 899999999986431122 3346666778
Q ss_pred CCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCC
Q 013804 225 LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (436)
Q Consensus 225 ~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (436)
++|+.|+.+|++.+ .+.|+|+.+.+..... . .....+++++..+.+|+|||||++ +|++|||+++....+. .
T Consensus 89 ~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~-~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~-~ 160 (189)
T 2ea3_A 89 PVGSAVCRSGSTTG----WHCGTITALNSSVTYP-E-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCR-T 160 (189)
T ss_dssp CTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETT-T
T ss_pred CCCCEEEEEEeCCc----cEEEEEEecceEEEeC-C-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCC-C
Confidence 99999999999865 5789998887765321 1 113457788888889999999995 7999999998765343 3
Q ss_pred Ccceeeeeeeccchhh
Q 013804 305 SGVGFSIPVDTVNGIV 320 (436)
Q Consensus 305 ~~~~~aIP~~~i~~~l 320 (436)
.+.+|++|++.+++.+
T Consensus 161 ~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 161 GGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred CCcEEEEEHHHHHHHC
Confidence 4689999987766544
No 30
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.71 E-value=2.5e-17 Score=149.53 Aligned_cols=154 Identities=19% Similarity=0.276 Sum_probs=114.2
Q ss_pred eEE-EEEEEcC--CCEEEecccccCCCCeEEEEecCCcEEeeEEEEEc-CCCCeEEEEEcCCCCCCc--------ceecC
Q 013804 152 GSG-SGFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIG 219 (436)
Q Consensus 152 ~~G-SGfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~~~l~ 219 (436)
..| +||++.+ +++||||+||+++...+.+ +.++++..+ +..|+||||++.+....+ ++++.
T Consensus 14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~ 86 (186)
T 2pfe_A 14 YRCSIGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVT 86 (186)
T ss_dssp EEEECCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECC
T ss_pred CcEEeeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecC
Confidence 344 6999964 4689999999998877654 557888887 899999999986431122 23455
Q ss_pred CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 220 ~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
.+..+.+|++|+.+|++.+ .+.|+|+++.+..... ...+..+++++..+.+|+|||||++ +|+++||+++...
T Consensus 87 ~~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~--~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~ 159 (186)
T 2pfe_A 87 GSQEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYA--EGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTG 159 (186)
T ss_dssp BCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET--TEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred CCCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeC--CceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCC
Confidence 5677899999999998866 6789998888764321 1123456777877889999999995 7899999999764
Q ss_pred CCCCCCcceeeeeeeccchhh
Q 013804 300 PSGASSGVGFSIPVDTVNGIV 320 (436)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~l 320 (436)
.+. ..+.+|++|++.+.+.+
T Consensus 160 ~c~-~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 160 DCR-SGGITFFQPINPLLSYF 179 (186)
T ss_dssp ETT-TEEEEEEEEHHHHHHHH
T ss_pred CCC-CCCcEEEEEHHHHHHHC
Confidence 333 34678999987665543
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.70 E-value=3e-17 Score=148.42 Aligned_cols=156 Identities=22% Similarity=0.345 Sum_probs=106.2
Q ss_pred CeEEE-EEEEcC--CCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCC---CCcce-----ecC
Q 013804 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKD---KLRPI-----PIG 219 (436)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~---~~~~~-----~l~ 219 (436)
...|| ||+|.+ ++|||||+||+.+...+.+-..+ ....+.+|+||||++.+.. .+.++ .+.
T Consensus 11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 11 GSRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRT--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp TEEEECCEEEEETTEEEEEECHHHHTTCSEETTEEEE--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCceeeccee--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 35677 999974 35899999999876654222221 1233678999999986421 12221 222
Q ss_pred CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 220 ~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
....+.+|+.|+++|++.+ .+.|.++.+....... .+..+...++++..+++|+|||||++.+ ++|||++++..
T Consensus 83 ~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~-~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYG-SSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECG-GGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECC-CCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 3456789999999998754 4677887776654221 1111334567788888999999999865 99999999865
Q ss_pred CCCCCCcceeeeeeeccchhhh
Q 013804 300 PSGASSGVGFSIPVDTVNGIVD 321 (436)
Q Consensus 300 ~~~~~~~~~~aIP~~~i~~~l~ 321 (436)
.+. ..+.++++|+..+++++.
T Consensus 157 ~~~-~~~~~v~~~v~~~~~~l~ 177 (181)
T 2sga_A 157 NCR-TGGTTFYQPVTEALSAYG 177 (181)
T ss_dssp ETT-TEEEEEEEEHHHHHHHHT
T ss_pred CCc-CCCceEEEEHHHHHHhcC
Confidence 443 346789999887766653
No 32
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.67 E-value=2e-16 Score=139.56 Aligned_cols=115 Identities=19% Similarity=0.332 Sum_probs=91.4
Q ss_pred cCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEE---cCCCCCCcceecCCCCCCCC
Q 013804 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRI---DAPKDKLRPIPIGVSADLLV 226 (436)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv---~~~~~~~~~~~l~~~~~~~~ 226 (436)
+.+.||||+|+.+|++||++||+.+.....|++ +|++++ +.+++..|+|++++ +.+ ..+|+++++. +++
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~~~~~~-g~~P~l~las---p~v 84 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTTQSELP-GNWPQLHFAQ---PTT 84 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEECTTTSC-SCCCBCCBCC---CCS
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEeeccCCC-CCCcccccCC---Ccc
Confidence 468999999999999999999999999999999 998888 67779999999999 444 4678888843 688
Q ss_pred CCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEee
Q 013804 227 GQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 227 G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~ 296 (436)
|+.-+. .+.|.+.++... ...++++ .+|+||||++|.+ +||||+++
T Consensus 85 G~a~~~----------~~tG~~~~l~g~----------~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 85 GPASWC----------TATGDEEGLLSG----------EVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp EEEEEE----------ETTEEEEEEECS----------SCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred cceEEe----------eccccEEEEecC----------CceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 884333 344555544310 2455666 7999999999988 99999998
No 33
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.60 E-value=2e-14 Score=133.94 Aligned_cols=171 Identities=18% Similarity=0.236 Sum_probs=112.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecC------CcEEeeEEEEEcCC-----CCeEEEEEcCCC---CCCc
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD------QSAYDAKIVGFDQD-----KDVAVLRIDAPK---DKLR 214 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d------g~~~~a~vv~~d~~-----~DlAlLkv~~~~---~~~~ 214 (436)
...|+|++|+++ +|||+|||+.+. ..+.|+++. ++.+.++-+..|+. +||||||++.+. ..+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~ 101 (224)
T 1pq7_A 23 GPWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIG 101 (224)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBC
T ss_pred CeEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCccc
Confidence 468999999987 999999999853 457787743 44567777777775 499999998764 2466
Q ss_pred ceecCC-CCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCCCCCC
Q 013804 215 PIPIGV-SADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 215 ~~~l~~-~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
|+.|.. ...+..|+.+++.||+.... .......+.-+....+. +.........+.. ....|.|+||
T Consensus 102 picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (224)
T 1pq7_A 102 YARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSG 181 (224)
T ss_dssp CCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTT
T ss_pred ceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCC
Confidence 777763 33457899999999975432 12333333222211110 0001111233333 2467899999
Q ss_pred CeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhc
Q 013804 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
|||+..+|.++||+|++.. |+.....+....+...++|+++.
T Consensus 182 gPL~~~~g~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 223 (224)
T 1pq7_A 182 GPIVDSSNTLIGAVSWGNG-CARPNYSGVYASVGALRSFIDTY 223 (224)
T ss_dssp CEEECTTCCEEEEEEECSS-SSCTTCCEEEEETTTSHHHHHHH
T ss_pred cceECcCCeEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHhh
Confidence 9999878999999998753 44333456667777778887653
No 34
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.60 E-value=3.2e-14 Score=133.61 Aligned_cols=170 Identities=17% Similarity=0.244 Sum_probs=109.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEec---------CCcEEeeEEEEEcC------------------CCCeEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA---------DQSAYDAKIVGFDQ------------------DKDVAV 203 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~---------dg~~~~a~vv~~d~------------------~~DlAl 203 (436)
...|+|.||+++ +|||+|||+.+... |.++ .++.+.++-+..|+ .+||||
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~~~--v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (237)
T 2zch_P 23 RAVCGGVLVHPQ-WVLTAAHCIRNKSV--ILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLML 99 (237)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCSSCE--EEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEE
T ss_pred CeEEEEEEecCC-EEEEcHHhcCCCce--EEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEE
Confidence 568999999987 99999999987544 4432 13455666555554 469999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE---
Q 013804 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT--- 270 (436)
Q Consensus 204 Lkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~--- 270 (436)
||++.+. ..+.|+.|... ....|+.+++.||..... .......+.-+....+.. .........+..
T Consensus 100 l~L~~~~~~~~~v~pi~Lp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 178 (237)
T 2zch_P 100 LRLSEPAELTDAVKVMDLPTQ-EPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRW 178 (237)
T ss_dssp EEESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECT
T ss_pred EEeCCCCccCCcEeeeECCCC-CCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCC
Confidence 9998763 24667777643 467899999999975432 122222232222111110 000011223332
Q ss_pred --ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. ++.++||+|++...|+.....+.+..+...++|+++.++
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 179 TGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp TCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 246789999999995 689999999986445443455667788888888887654
No 35
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.59 E-value=2.6e-14 Score=133.31 Aligned_cols=169 Identities=20% Similarity=0.254 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC----------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD----------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~----------~DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.. .+.|+++. ++.+.++-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~ 99 (225)
T 1npm_A 23 RLICGGVLVGDR-WVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSAN 99 (225)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCC
T ss_pred ceEEEEEEECCC-EEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCccc
Confidence 468999999987 99999999963 45566542 34455665555543 399999998764
Q ss_pred --CCCcceecCCCCCCCCCCEEEEEecCCCC------CCceeEeEEeeeeeeeccC-CCCCCcccEEEE----ccccCCC
Q 013804 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSA-ATGRPIQDVIQT----DAAINPG 277 (436)
Q Consensus 211 --~~~~~~~l~~~~~~~~G~~V~~vG~p~g~------~~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~----~~~i~~G 277 (436)
..+.|+.|... .+..|+.+++.||.... ........+.-+....+.. .........+.. ....|.|
T Consensus 100 ~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~G 178 (225)
T 1npm_A 100 LGDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQG 178 (225)
T ss_dssp CSSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTT
T ss_pred CCCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCC
Confidence 24678888644 46789999999997542 1223333333222111110 000111223333 3467999
Q ss_pred CCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
+|||||+. +|+++||+|++...|+.....+.+..+...++|+++.+
T Consensus 179 DSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (225)
T 1npm_A 179 DSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKTM 224 (225)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHHH
T ss_pred CCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 99999995 68999999997544543334566677777778877643
No 36
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.58 E-value=4.6e-14 Score=131.47 Aligned_cols=170 Identities=19% Similarity=0.264 Sum_probs=109.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.. .+.|+++. ++.+.+.-+..|+. +||||||++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~ 99 (223)
T 1lo6_A 23 HLLCGGVLIHPL-WVLTAAHCKKP--NLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE 99 (223)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCT--TCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CEEEEeEEecCC-EEEECccCCCC--CeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCC
Confidence 468999999987 99999999974 34555532 23455555556653 599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNSGG 281 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~SGG 281 (436)
.+.|+.|... ....|+.++++||..... .......+.-+....+.. .........+.. ....|.|+|||
T Consensus 100 ~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGg 178 (223)
T 1lo6_A 100 LIQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGG 178 (223)
T ss_dssp TBCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTC
T ss_pred ceeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCC
Confidence 4677778644 357899999999975431 122333332222211110 001111233333 24678999999
Q ss_pred eEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||+. +|.++||+|++...|+.....+.+.-+...++|+++.++
T Consensus 179 PL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 179 PLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp EEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred cEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 9995 689999999874445544455667788888888887654
No 37
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.58 E-value=2.6e-14 Score=134.24 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=107.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcC------------------CCCeEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAV 203 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAl 203 (436)
...|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++.+..|+ .+||||
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (237)
T 1gvz_A 23 HFQCGGVLVHPQ-WVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLML 99 (237)
T ss_dssp EEEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEE
T ss_pred ceEEEeEEeeCC-EEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEE
Confidence 458999999987 9999999997 445566532 2345555555554 679999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC-CceeEeEEee-----eeeeeccCCC-CCCcccEEEE---
Q 013804 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-HTLTTGVISG-----LRREISSAAT-GRPIQDVIQT--- 270 (436)
Q Consensus 204 Lkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-~~~~~G~vs~-----~~~~~~~~~~-~~~~~~~i~~--- 270 (436)
|+++.+. ..+.|+.|... ....|+.+++.||..... .......+.. +....+.... .......+..
T Consensus 100 l~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 178 (237)
T 1gvz_A 100 LRLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHR 178 (237)
T ss_dssp EEESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECS
T ss_pred EEeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeC
Confidence 9998764 24667778644 467899999999975421 1111222221 1111111100 0001122322
Q ss_pred --ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. +|.++||+|++...|+.....+....+...++|+++.++
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 179 DDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp STTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred CCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 235789999999995 789999999886344423334566777788888877654
No 38
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.58 E-value=3.8e-14 Score=131.42 Aligned_cols=164 Identities=15% Similarity=0.205 Sum_probs=106.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC---------cEEeeEEEEEc------CCCCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------SAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|+++.. +.+.++.+..| ..+||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 101 (218)
T 2z7f_E 23 GHFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATIN 101 (218)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCS
T ss_pred CcEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCC
Confidence 468999999987 999999999765 3577777532 34555544444 23599999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
..+.|+.|.... .+..|+.+++.||...... ......+.-+ . ...... .+.. ....|.|+|
T Consensus 102 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~-----~~C~~~--~~Ca~~~~~~~~~C~GDS 173 (218)
T 2z7f_E 102 ANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-T-----SLCRRS--NVCTLVRGRQAGVCFGDS 173 (218)
T ss_dssp SSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-C-----TTCCTT--SEEEECTTSCCBCCTTCT
T ss_pred CceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-h-----hHcCcc--eeeeccCCCCCeeCCCcC
Confidence 246677776443 3567999999999754321 2222222221 1 111111 1221 346789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
||||+. +|.++||+|+....++.....+.+..+...++|+++.+
T Consensus 174 GgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 174 GSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp TCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 999995 68999999984333543334566777888888887654
No 39
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.58 E-value=2.2e-14 Score=133.49 Aligned_cols=170 Identities=19% Similarity=0.247 Sum_probs=111.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|+++. ++.+.++-+..|+. +|||||+++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~ 101 (222)
T 1eq9_A 23 SHRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFND 101 (222)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCC
Confidence 468999999987 999999999763 467787753 34566666666654 599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc-CCCCCCcccEEEE----ccccCCCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS-AATGRPIQDVIQT----DAAINPGNSGG 281 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~-~~~~~~~~~~i~~----~~~i~~G~SGG 281 (436)
.+.|+.|........|+.+++.||..... .......+.-+....+. .... .....+.. ....|.|+|||
T Consensus 102 ~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGg 180 (222)
T 1eq9_A 102 LVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGG 180 (222)
T ss_dssp TBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTC
T ss_pred ceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccc
Confidence 46788886554446799999999975432 12233333222211111 0000 11222332 23578999999
Q ss_pred eEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||+. +|.++||+|++.. ++. ...+....+...++|+++.++
T Consensus 181 PL~~-~~~l~GI~S~g~~-C~~-~~p~vyt~V~~~~~WI~~~~~ 221 (222)
T 1eq9_A 181 PLVA-NGAQIGIVSFGSP-CAL-GEPDVYTRVSSFVSWINANLK 221 (222)
T ss_dssp EEEE-TTEEEEEEEECST-TTS-SSCEEEEEGGGGHHHHHHTSC
T ss_pred eEEE-CCEEEEEEEECCC-cCC-CCCCEEEEHHHHHHHHHHHhh
Confidence 9995 6899999999753 432 345666778888888877553
No 40
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.58 E-value=7.1e-14 Score=130.38 Aligned_cols=172 Identities=20% Similarity=0.286 Sum_probs=110.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC--eEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC--
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK-- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-- 210 (436)
...|+|.+|+++ +|||+|||+.+.. .+.|+++. .+.+.+.-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~ 101 (228)
T 2xw9_A 23 AHLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATL 101 (228)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCC
T ss_pred CeEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCccc
Confidence 468999999987 9999999997543 67887753 23456666666654 599999998764
Q ss_pred -CCCcceecCCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCC---CCCcccEEEE---ccccCCC
Q 013804 211 -DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT---GRPIQDVIQT---DAAINPG 277 (436)
Q Consensus 211 -~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~---~~~~~~~i~~---~~~i~~G 277 (436)
..+.|+.|... ..+..|+.+++.||..... .......+.-+....+.... .......+.. ....|.|
T Consensus 102 ~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~G 181 (228)
T 2xw9_A 102 GPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKG 181 (228)
T ss_dssp BTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTT
T ss_pred CCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCC
Confidence 24567777543 3467899999999975432 12222222222211111100 0111222332 2467899
Q ss_pred CCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
+|||||+. +|.++||++++...|+.....+.+..+...++|+++.+
T Consensus 182 DsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 182 DAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp CTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 99999995 67999999987644554344566778888888887754
No 41
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.57 E-value=7.2e-14 Score=130.11 Aligned_cols=166 Identities=15% Similarity=0.215 Sum_probs=107.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC----------cEEeeEEEEEc------CCCCeEEEEEcCCC--
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ----------SAYDAKIVGFD------QDKDVAVLRIDAPK-- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg----------~~~~a~vv~~d------~~~DlAlLkv~~~~-- 210 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|+++.. +.+..+.+..+ ..+||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~ 101 (225)
T 1a7s_A 23 RHFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANL 101 (225)
T ss_dssp EEEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCC
T ss_pred CcEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccC
Confidence 468999999987 999999999763 4577777532 34444444443 34699999998764
Q ss_pred -CCCcceecCCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCC
Q 013804 211 -DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGN 278 (436)
Q Consensus 211 -~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~ 278 (436)
..+.|+.|.... .+..|+.+++.||+..... ......+.-+... .+.. ..+.. ....|.|+
T Consensus 102 ~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~-----~C~~--~~~Ca~~~~~~~~~C~GD 174 (225)
T 1a7s_A 102 TSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPED-----QCRP--NNVCTGVLTRRGGICNGD 174 (225)
T ss_dssp BTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGG-----GSCT--TEEEEECSSSSCBCCTTC
T ss_pred CCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHH-----Hhcc--CceEEeccCCCCCcccCC
Confidence 236677775433 2468999999999854321 2222222211111 1111 22222 34679999
Q ss_pred CCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
|||||+. +|.++||+|++...++.. .+.+..+...++|+++.++..
T Consensus 175 SGgPl~~-~g~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 175 GGTPLVC-EGLAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp TTCEEEE-TTEEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHSC
T ss_pred Ccchhee-CCEEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcCC
Confidence 9999995 479999999985455433 567788888889998876543
No 42
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.57 E-value=4.7e-14 Score=131.81 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=110.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------cEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.....+.|+++.. +.+.++.+..|+. +||||||++.+. .
T Consensus 24 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (228)
T 1fxy_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (228)
T ss_dssp CEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCC
Confidence 468999999987 9999999998767777777432 2355555566653 599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
.+.|+.|... ....|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+|
T Consensus 103 ~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 181 (228)
T 1fxy_A 103 NVAPASLPTA-PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDS 181 (228)
T ss_dssp TBCCCCCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCT
T ss_pred ceeccCCCCC-CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcc
Confidence 4677777543 467899999999975422 122333332222111100 001111233333 246789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. +|+++||+|++.. ++.....+.+.-+...++|+++.++
T Consensus 182 GgPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 182 GGPVVC-NGQLQGVVSWGDG-CAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp TCEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccceEE-CCEEEEEEEECCC-CCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 999995 6899999998753 3323345666777888888877654
No 43
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.57 E-value=1.7e-13 Score=128.90 Aligned_cols=172 Identities=16% Similarity=0.214 Sum_probs=110.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCC---CCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++. .+.+.++.+..++. +||||||++.+.
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~ 103 (240)
T 1mza_A 25 HHVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAK 103 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCcc
Confidence 468999999987 99999999864 4567777643 13455555555543 599999998764
Q ss_pred --CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeecc--C-CCC--CCcccEEEE-----cc
Q 013804 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--A-ATG--RPIQDVIQT-----DA 272 (436)
Q Consensus 211 --~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~--~-~~~--~~~~~~i~~-----~~ 272 (436)
..+.|+.|.....+..|+.+++.||..... .......+.-+....+. . ... ......+.. ..
T Consensus 104 ~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~ 183 (240)
T 1mza_A 104 LNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQK 183 (240)
T ss_dssp CBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCC
T ss_pred cCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCC
Confidence 246777776545567899999999975432 22333333322222111 0 000 111223332 24
Q ss_pred ccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeec-cchhhhhccc
Q 013804 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQLVK 325 (436)
Q Consensus 273 ~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~-i~~~l~~l~~ 325 (436)
..|.|+|||||+. +|.++||+|++.. |+.....+....+.. ..+|+++.++
T Consensus 184 ~~C~GDSGGPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~y~~WI~~~~~ 235 (240)
T 1mza_A 184 DSCKGDAGGPLIC-KGVFHAIVSGGHE-CGVATKPGIYTLLTKKYQTWIKSNLV 235 (240)
T ss_dssp CCCTTCTTCEEEE-TTEEEEEECSSCC-SSCTTCCEEEEECCHHHHHHHHHHTC
T ss_pred ccCCCCCCCeeEE-CCEEEEEEEECCC-CCCCCCCcEEEeChHHHHHHHHHhcc
Confidence 6789999999995 6899999998753 443333455566666 7778877554
No 44
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.56 E-value=5.6e-14 Score=131.94 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=108.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcC------------------CCCeEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAV 203 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAl 203 (436)
...|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++.+..|+ .+||||
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (237)
T 1ao5_A 23 EHICGGVLLDRN-WVLTAAHCYV--DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLML 99 (237)
T ss_dssp EEEEEEEEEETT-EEEECTTCCC--SSCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEE
T ss_pred CeEEEEEEeeCC-EEEECHHHCC--CCCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEE
Confidence 468999999987 9999999996 345666543 2233444444553 579999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE---
Q 013804 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT--- 270 (436)
Q Consensus 204 Lkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~--- 270 (436)
||++.+. ..+.|+.|... .+..|+.+++.||..... .......+.-+....+.. .........+..
T Consensus 100 l~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 178 (237)
T 1ao5_A 100 LRLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEM 178 (237)
T ss_dssp EEESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECT
T ss_pred EEeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccC
Confidence 9998764 24667888643 467899999999975322 122333332222111110 000111223332
Q ss_pred --ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. +|.++||+|++...|+.....+.+..+...++|+++.++
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 179 GGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp TCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 236789999999995 789999999974445543445667778888888877654
No 45
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.56 E-value=5.3e-14 Score=131.32 Aligned_cols=171 Identities=18% Similarity=0.177 Sum_probs=110.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------cEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+...+.|+++.. ..+.++-+..|+. +||||||++.+. .
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~ 101 (226)
T 1azz_A 23 MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA 101 (226)
T ss_dssp TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCS
T ss_pred cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCC
Confidence 568999999987 9999999999888888887532 2344444455543 599999998764 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCCCCCCcccEEEE----ccccCCCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQT----DAAINPGNSGG 281 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~----~~~i~~G~SGG 281 (436)
.+.|+.|.... ...|+.+++.||..... .......+.-+....+...........+.. ....|.|+|||
T Consensus 102 ~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGg 180 (226)
T 1azz_A 102 AIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGG 180 (226)
T ss_dssp SSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTC
T ss_pred CcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCc
Confidence 46777776444 47899999999975432 122222222111111100000011223332 24678999999
Q ss_pred eEECCCCcEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhccc
Q 013804 282 PLLDSSGSLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 282 Plvd~~G~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||+ .+|.++||+|++.. .+. ....+.+..+...++|+++.+.
T Consensus 181 PL~-~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~~ 223 (226)
T 1azz_A 181 PLN-YNGLTYGITSFGAAAGCE-AGYPDAFTRVTYFLDWIQTQTG 223 (226)
T ss_dssp EEE-ETTEEEEEEEEEETTCTT-SCCCEEEEESGGGHHHHHHHHC
T ss_pred ceE-ECCEEEEEEEEECCCCCC-CCCCCEEEEHHHHHHHHHHHhC
Confidence 999 57899999999873 333 2345566777888888877543
No 46
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.56 E-value=2.9e-13 Score=125.56 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=106.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC--eEEEEecC---------CcEEeeEEEEEc------CCCCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~d---------g~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+.. .+.|+++. .+.+....+..+ ..+||||||++.+.
T Consensus 26 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~ 104 (221)
T 1fuj_A 26 SHFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLS 104 (221)
T ss_dssp CCCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccC
Confidence 457999999987 9999999998653 57777753 234445444443 24599999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
..+.|+.|.... .+..|+.+++.||...... ......+.-+ . ..... ..+.. ....|.|+|
T Consensus 105 ~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~-----~~C~~--~~~Ca~~~~~~~~~C~GDS 176 (221)
T 1fuj_A 105 ASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-T-----FFCRP--HNICTFVPRRKAGICFGDS 176 (221)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-C-----TTCCT--TEEEEECSSSSCBCCTTCT
T ss_pred CcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-e-----eecCC--ceeeeccCCCCCCCCCCCC
Confidence 246677776443 2467999999999754321 1222222211 1 11111 12222 346799999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
||||+. +|.++||+++....++.....+.+..+...++|+++.+
T Consensus 177 GgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 177 GGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp TCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 999996 78999999984322443334566677788888887654
No 47
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.56 E-value=7.6e-14 Score=129.99 Aligned_cols=169 Identities=18% Similarity=0.225 Sum_probs=108.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC----------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+ .+.|.++. .+.+.+..+..|+. +||||||++.+.
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~ 99 (223)
T 2bdg_A 23 ELFCSGVLVHPQ-WVLSAAHCFQN--SYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSES 99 (223)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEhHHhCCC--CeEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCC
Confidence 468999999987 99999999975 34555432 23455665566654 599999998763
Q ss_pred CCCcceecCCCCCCCCCCEEEEEecCCCCCC----ceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCCC
Q 013804 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
..+.|+.|.. ..+..|+.+++.||...... ......+.-+....+.. .........+.. ....|.|+||
T Consensus 100 ~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 2bdg_A 100 DTIRSISIAS-QCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 178 (223)
T ss_dssp SSCCCCCBCS-SCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTT
T ss_pred CceecccCCC-CCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCC
Confidence 2467777754 34678999999999754321 22223332222111110 000111233333 2357899999
Q ss_pred CeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
|||+. +|.++||+|++...|+.....+....+...++|+++.+
T Consensus 179 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 179 GPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred chheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 99995 67999999998654554344566677778888887654
No 48
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.56 E-value=1.1e-13 Score=129.95 Aligned_cols=170 Identities=17% Similarity=0.211 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC------------------CCeEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD------------------KDVAV 203 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~------------------~DlAl 203 (436)
...|+|.||+++ +|||+|||+.+ .+.|+++. .+.+.++-+..|++ +||||
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (238)
T 1spj_A 23 TFQCGGILVHRQ-WVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLML 99 (238)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEE
T ss_pred CeeEEEEEecCC-EEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEE
Confidence 468999999987 99999999975 45565532 23445555555543 49999
Q ss_pred EEEcCCCC----CCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE--
Q 013804 204 LRIDAPKD----KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT-- 270 (436)
Q Consensus 204 Lkv~~~~~----~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-- 270 (436)
||++.+.. .+.++.|... ....|+.+++.||..... .......+.-+....+.. .........+..
T Consensus 100 l~L~~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 178 (238)
T 1spj_A 100 LRLTEPADTITDAVKVVELPTE-EPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGH 178 (238)
T ss_dssp EEESSCCCCSSTTCCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEEC
T ss_pred EEECccccccCCceeeccCCCC-CCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeC
Confidence 99987642 3567777543 456799999999975321 123333332222211110 000011223332
Q ss_pred ---ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 ---DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 ---~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. +|.++||+|++...|+.....+.+..+...++|+++.++
T Consensus 179 ~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 179 LEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp TTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 246789999999995 689999999985555543445667778888888887654
No 49
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.55 E-value=1.7e-13 Score=128.37 Aligned_cols=169 Identities=19% Similarity=0.223 Sum_probs=109.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC------------------CCeEEE
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD------------------KDVAVL 204 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~------------------~DlAlL 204 (436)
..|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++-+..|++ +|||||
T Consensus 22 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 98 (235)
T 1ton_A 22 YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLL 98 (235)
T ss_dssp SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEE
T ss_pred CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEE
Confidence 58999999987 9999999996 345566542 23344555555543 499999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCCC-CCCcccEEEE----
Q 013804 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQT---- 270 (436)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~~-~~~~~~~i~~---- 270 (436)
|++.+. ..+.|+.|... .+..|+.+++.||..... .......+.-+....+.... .......+..
T Consensus 99 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 177 (235)
T 1ton_A 99 HLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEME 177 (235)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTT
T ss_pred EcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCC
Confidence 998763 24677888644 467899999999975432 12333333322222111100 1111223332
Q ss_pred -ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 -DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 -~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. +|.++||+|++...|+.....+.+.-+...++|+++.++
T Consensus 178 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 178 GGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 236789999999995 789999999885545543445677788888888887654
No 50
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.55 E-value=1.2e-13 Score=128.53 Aligned_cols=169 Identities=18% Similarity=0.200 Sum_probs=108.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++-+..|+. +||||||++.+. .
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 98 (223)
T 3mfj_A 22 YHFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNS 98 (223)
T ss_dssp SEEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CeEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCC
Confidence 468999999987 9999999995 455666642 23455665666654 599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
.+.|+.|... ....|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+|
T Consensus 99 ~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 177 (223)
T 3mfj_A 99 RVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDS 177 (223)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCT
T ss_pred cEeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCc
Confidence 4677888644 357899999999975431 122333332222111110 001111233333 235789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. +|+++||+|++.. ++.....+.+..+...++|+++.++
T Consensus 178 GgPL~~-~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 178 GGPVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccceEE-CCEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 999995 7899999998743 4333345667778888888877553
No 51
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.55 E-value=2.1e-13 Score=127.71 Aligned_cols=174 Identities=18% Similarity=0.170 Sum_probs=109.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC------Cc--EEeeEEEEEcC-------CCCeEEEEEcCCC---CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QS--AYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~--~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (436)
...|+|.+|+++ ||||+|||+.....+.+-..+ .. .+..+.+..++ .+||||||++.+. ..
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 103 (238)
T 4e7n_A 25 TLFCGGTLINQE-WVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKH 103 (238)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEecCC-EEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCc
Confidence 468999999987 999999999764443332221 11 12233333343 4599999998754 34
Q ss_pred CcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCCC----CCCcccEEEE-----ccccCCC
Q 013804 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT----GRPIQDVIQT-----DAAINPG 277 (436)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~~----~~~~~~~i~~-----~~~i~~G 277 (436)
+.|+.|... ....|+.+++.||+.... .......+.-+......... .......+.. ....|.|
T Consensus 104 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 182 (238)
T 4e7n_A 104 IAPFSLPSS-PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKG 182 (238)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTT
T ss_pred eeeeeCCCC-CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCC
Confidence 667777543 456799999999975321 12233333322222221110 0011122322 3467899
Q ss_pred CCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 278 ~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
+|||||+. +++++||+|++...++.....+.+..+...++|+++.++..
T Consensus 183 DSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 183 DSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred CCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 99999995 68999999998765554445677788888899998877643
No 52
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.55 E-value=7.7e-14 Score=130.61 Aligned_cols=171 Identities=19% Similarity=0.233 Sum_probs=108.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC----------CcEEeeEEEEEcC-------CCCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+. +.|+++. .+.+..+.+..|+ .+||||||++.+.
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~ 98 (231)
T 2aiq_A 22 GSLCGGTLINQE-WVLTARHCDRGN--MRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNS 98 (231)
T ss_dssp TEEEEEEECSSS-EEEECGGGCCSS--CEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCB
T ss_pred CCeEEEEEEeCC-EEEEcHHcCCCC--CEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCC
Confidence 357999999987 999999999874 3444432 1234444454554 3599999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCC
Q 013804 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
..+.|+.|... ....|+.++++||+.... .......+.-+................+.. ....|.|+|
T Consensus 99 ~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 177 (231)
T 2aiq_A 99 AHIAPLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDS 177 (231)
T ss_dssp TTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCT
T ss_pred CcEEeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcC
Confidence 24667778644 346799999999975321 222333332222211110000011222322 246789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
||||+. +|+++||+|++...++.....+.+..+...++|+++.++.
T Consensus 178 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 178 GGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp TCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 999995 6899999999854455434456677888888999887654
No 53
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.55 E-value=1.5e-13 Score=128.44 Aligned_cols=174 Identities=17% Similarity=0.172 Sum_probs=108.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC-------CcE-EeeEEEEEcC-------CCCeEEEEEcCCC---CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSA-YDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d-------g~~-~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (436)
...|+|.+|+++ ||||+|||+.....+.+-..+ ... ...+.+..++ .+||||||++.+. ..
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 101 (234)
T 3s69_A 23 GFFCSGTLINEE-WVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEH 101 (234)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTT
T ss_pred CeEEeEEEeeCC-EEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCc
Confidence 568999999987 999999999754433332221 111 2233333343 3599999998753 34
Q ss_pred CcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCCCCC
Q 013804 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
+.|+.|... ....|+.+++.||..... .......+.-+...... +.........+.. ....|.|+|
T Consensus 102 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 180 (234)
T 3s69_A 102 IVPLSLPSS-PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDS 180 (234)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCT
T ss_pred ceeeecCCC-CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCC
Confidence 567777543 456799999999975322 12222223222221111 0000111122322 346789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
||||+. +++++||+|++...|+.....+.+..+...++|+++.++..
T Consensus 181 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 181 GGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 999995 67899999998665654445667788888999998877643
No 54
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.55 E-value=8e-14 Score=131.18 Aligned_cols=170 Identities=18% Similarity=0.211 Sum_probs=102.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcC------------------CCCeEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAV 203 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAl 203 (436)
...|+|.||+++ +|||+|||+.+. +.|+++. ++.+.++-+..|+ .+||||
T Consensus 26 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 102 (240)
T 1sgf_A 26 KYQCGGVLLDRN-WVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLML 102 (240)
T ss_dssp SCCEEEEECSSS-EEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEE
T ss_pred CeEEEEEEecCC-EEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEE
Confidence 467999999987 999999999743 4444432 2344455444443 359999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCCC------ceeEeEEeeeeeeeccCCCC-CCcccEEEE---
Q 013804 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH------TLTTGVISGLRREISSAATG-RPIQDVIQT--- 270 (436)
Q Consensus 204 Lkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~------~~~~G~vs~~~~~~~~~~~~-~~~~~~i~~--- 270 (436)
|+++.+. ..+.|+.|... ....|+.+++.||...... ......+.-+....+..... ......+..
T Consensus 103 l~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 181 (240)
T 1sgf_A 103 LRLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEM 181 (240)
T ss_dssp EEESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEEC
T ss_pred EEeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccC
Confidence 9998764 24677888644 4578999999998754321 11112222111111110000 011222322
Q ss_pred --ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. +|.++||+|++...|+.....+.+..+...++|+++.++
T Consensus 182 ~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 182 DGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp SSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 235789999999995 789999999875555543445667788888888887665
No 55
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.54 E-value=2.3e-13 Score=128.17 Aligned_cols=176 Identities=16% Similarity=0.197 Sum_probs=111.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC-eEEEEecC------CcEEeeEEEEEcC--------CCCeEEEEEcCCC---CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS-DIRVTFAD------QSAYDAKIVGFDQ--------DKDVAVLRIDAPK---DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~-~i~V~~~d------g~~~~a~vv~~d~--------~~DlAlLkv~~~~---~~ 212 (436)
...|+|.||+++ +|||+|||+.+.. .+.|+++. ++.+.++-+..|+ .+||||||++.+. ..
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~ 101 (240)
T 2zgc_A 23 SHLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRT 101 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSS
T ss_pred CeEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCc
Confidence 468999999987 9999999997653 57777753 2345555555543 3599999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccC---CCCCCcccEEEE-----ccccCCCC
Q 013804 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA---ATGRPIQDVIQT-----DAAINPGN 278 (436)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~---~~~~~~~~~i~~-----~~~i~~G~ 278 (436)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 181 (240)
T 2zgc_A 102 IRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGD 181 (240)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTC
T ss_pred eeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCC
Confidence 6677776443 356799999999975432 122233332222211111 000111233332 24678999
Q ss_pred CCCeEECC-CCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 279 SGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 279 SGGPlvd~-~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
|||||+.. +..++||+|++...|+.....+.+..+...++|+++.++..
T Consensus 182 SGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~~ 231 (240)
T 2zgc_A 182 SGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGRS 231 (240)
T ss_dssp TTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCCC
T ss_pred ccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhhc
Confidence 99999953 23899999987544543334566677888888888866543
No 56
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.54 E-value=2e-13 Score=127.07 Aligned_cols=169 Identities=17% Similarity=0.215 Sum_probs=108.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ .+.|+++. ++.+.++-+..|++ +||||||++.+. .
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 98 (222)
T 1hj8_A 22 YHFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNT 98 (222)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSS
T ss_pred CcEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 468999999987 99999999974 44555532 23456666666654 599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
.+.|+.|... .+..|+.+++.||+.... .......+.-+....+.. .........+.. ....|.|+||
T Consensus 99 ~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 177 (222)
T 1hj8_A 99 YVQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSG 177 (222)
T ss_dssp SCCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTT
T ss_pred ceeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCcc
Confidence 4677888643 467899999999975432 123333332222111110 000111233333 2357899999
Q ss_pred CeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||+. +|+++||+|++.. ++.....+.+..+...++|+++.++
T Consensus 178 gPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 178 GPVVC-NGELQGVVSWGYG-CAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp CEEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cceEE-CCEEEEEEeecCC-CCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 99995 6899999998753 4433345667778888888877553
No 57
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.54 E-value=8.2e-15 Score=131.40 Aligned_cols=118 Identities=24% Similarity=0.298 Sum_probs=81.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKV 230 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V 230 (436)
.+.|+||.|+.+++||||+||+.+.+. +...++.++. +.+++..|+|++++......+|.++++... ..|...
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~--vVt~~g~r~~---~~f~~~~D~All~i~~~~g~~P~lKlA~~~--~~G~a~ 101 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA--RVSGVGFNQM---LDFDVKGDFAIADCPNWQGVAPKAQFCEDG--WTGRAY 101 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE--EEEETTEEEE---EECEEETTEEEEECTTCCSCCCBCCBCCTT--CCEEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE--EEecCCcEEE---EEecCCCcEEEEEccCcCCCCCcceeeeee--ccCceE
Confidence 578999999877899999999999887 5556776664 367899999999996544578888886322 223232
Q ss_pred EEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeee
Q 013804 231 YAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (436)
Q Consensus 231 ~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (436)
+..-+ ....|.+.. ...+.++ ++|||||||+|.+|+|||||+...
T Consensus 102 ~~~~~------gv~~G~i~~--------------~~al~~T---~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 102 WLTSS------GVEPGVIGN--------------GFAFCFT---ACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEETT------EEEEEEEET--------------TEEEESS---CCCSTTCEEEETTSCEEEEEEC--
T ss_pred EEEcc------Ccccccccc--------------CCEEEec---CCCCCCCccCCCCCcEEEEEeccC
Confidence 32211 123333320 0122222 589999999999999999999753
No 58
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.54 E-value=1.5e-13 Score=128.77 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=108.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ ....|+++. .+.+.++-+..|+. +||||||++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 100 (234)
T 1orf_A 23 KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINK 100 (234)
T ss_dssp SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCC
Confidence 468999999987 99999999975 445666643 23455666666653 599999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccC--CCCCC---cccEEEE-----ccccC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--ATGRP---IQDVIQT-----DAAIN 275 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~--~~~~~---~~~~i~~-----~~~i~ 275 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. ..... ....+.. ....|
T Consensus 101 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (234)
T 1orf_A 101 YVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSC 180 (234)
T ss_dssp SSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCC
T ss_pred CeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCC
Confidence 46677776443 346899999999975422 223333333332222210 00000 0133332 24678
Q ss_pred CCCCCCeEECCCCcEEEEEeeee-cCCCCCCcceeeeeee-ccchhhhhccc
Q 013804 276 PGNSGGPLLDSSGSLIGINTAIY-SPSGASSGVGFSIPVD-TVNGIVDQLVK 325 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~~-~~~~~~~~~~~aIP~~-~i~~~l~~l~~ 325 (436)
.|+|||||+. +|.++||+|++. ..|+.....+....+. ...+|+++.++
T Consensus 181 ~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~~ 231 (234)
T 1orf_A 181 NGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIK 231 (234)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHHC
T ss_pred CCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHHH
Confidence 9999999995 689999999986 2454333455566666 67778776543
No 59
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.54 E-value=2.6e-13 Score=126.83 Aligned_cols=173 Identities=17% Similarity=0.186 Sum_probs=109.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC--------cEE--eeEEEEEcCC-------CCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--------SAY--DAKIVGFDQD-------KDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--------~~~--~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ ||||+|||+.. .+.|.++.. ... ....+..++. +||||||++.+.
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~ 101 (234)
T 3s9c_A 25 TIHCAGALINRE-WVLTAAHCDRR--NIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYS 101 (234)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCT--TEEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCB
T ss_pred cEEEeeEEeeCC-EEEEchhhcCC--CceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccC
Confidence 357999999987 99999999975 445555321 111 2223333443 499999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCCCC--CCcccEEEE-----ccccCCCCC
Q 013804 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG--RPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~~~--~~~~~~i~~-----~~~i~~G~S 279 (436)
..+.|+.|... ....|+.+++.||..... .......+.-+.......... ......+.. ....|.|+|
T Consensus 102 ~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 180 (234)
T 3s9c_A 102 THIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDS 180 (234)
T ss_dssp TTBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCT
T ss_pred CcccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCC
Confidence 35677888544 456799999999975322 122333333222222211100 111223332 346789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccce
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGK 328 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~ 328 (436)
||||+. +++++||++++...++.....+.+..+...++|+++.++..+
T Consensus 181 GgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 181 GGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred CCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 999995 678999999987656544456777888889999988776543
No 60
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.53 E-value=9.2e-13 Score=122.52 Aligned_cols=168 Identities=17% Similarity=0.135 Sum_probs=106.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------cEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.. .+.|+++.. +.+.+.-+..|+. +||||||++.+. .
T Consensus 27 ~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~ 103 (226)
T 4ag1_A 27 SKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTL 103 (226)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCS
T ss_pred ccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCC
Confidence 467999999987 99999999954 566766431 3455666666765 499999998753 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
.+.++.|.... .+..|+.+++.||..... .......+.-+....+...........+.. ....|.|+||
T Consensus 104 ~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 104 AVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred ceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcCccceEeeccCCCCCcCccCCCC
Confidence 45566665332 346799999999975422 223333333222222221111111223332 2467899999
Q ss_pred CeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||+. ++.++||+|++... ... .+.+..+...++|+++.++
T Consensus 184 gPl~~-~~~l~Gi~S~g~~c-~~~--p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLC-AGVAQGIVSYGRSD-AKP--PAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEE-TTEEEEEEEECBTT-CCS--CEEEEEHHHHHHHHHHHHH
T ss_pred CceEE-cCEEEEEEEECCCC-CCC--CCEEEEhHHHHHHHHHHHh
Confidence 99995 78999999997653 222 5666777778888877654
No 61
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.53 E-value=1.9e-13 Score=127.51 Aligned_cols=170 Identities=16% Similarity=0.185 Sum_probs=108.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC----------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+. +.|+++. .+.+.+.-+..|+. +||||||++.+.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~ 100 (227)
T 2psx_A 24 QLYCGAVLVHPQ-WLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPT 100 (227)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCC
T ss_pred CceEEEEEEcCC-EEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCC
Confidence 468999999987 999999999753 4555432 23455555555543 599999998763
Q ss_pred CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE----ccccCCCCC
Q 013804 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT----DAAINPGNS 279 (436)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~----~~~i~~G~S 279 (436)
..+.|+.|.. ..+..|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+|
T Consensus 101 ~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 179 (227)
T 2psx_A 101 KDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDS 179 (227)
T ss_dssp SSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCT
T ss_pred CceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCC
Confidence 3467788863 4567899999999975432 122333332222111110 000111223333 236789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. ++.++||+|++...++.....+.+..+...++|+++.++
T Consensus 180 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 180 GGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred Ccceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999995 679999999874445433445677788888888887654
No 62
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.53 E-value=9.3e-14 Score=129.70 Aligned_cols=172 Identities=17% Similarity=0.179 Sum_probs=111.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCC--CCeEEEEecCC------cEEeeEEEEEc------CCCCeEEEEEcCCCC----C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFADQ------SAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~dg------~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++.. +.+.++.+..+ ..+|||||+++.+.. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~ 101 (235)
T 3h7t_A 23 KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKT 101 (235)
T ss_dssp SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcc
Confidence 457999999987 99999999964 35677877532 34555544443 235999999987642 4
Q ss_pred CcceecCCCC-CCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC--CCC----CCcccEEEE-----cccc
Q 013804 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA--ATG----RPIQDVIQT-----DAAI 274 (436)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~--~~~----~~~~~~i~~-----~~~i 274 (436)
+.++.|.... .+..|+.+++.||..... .......+.-+....+.. ... ......+.. ....
T Consensus 102 v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 181 (235)
T 3h7t_A 102 TKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYI 181 (235)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBC
T ss_pred ccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcc
Confidence 6677775433 267899999999975321 223333333222211110 000 011223333 3467
Q ss_pred CCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
|.|+|||||+. +|+++||+|++.. ++. ...+.+..+....+|+++.++.
T Consensus 182 C~GDsGgPl~~-~~~l~Gi~S~g~~-C~~-~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 182 GYGDAGDPAVQ-NGTLVGVASYISS-MPS-EFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp CTTCTTCEEEE-TTEEEEEECCCTT-CCT-TSCEEEEEGGGGHHHHHHHHTT
T ss_pred ccCCCCCceee-CCeEEEEEEecCC-CCC-CCCceEEEHHHHHHHHHHHHhC
Confidence 89999999995 7899999998754 443 4556777888888888886653
No 63
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.53 E-value=1.2e-12 Score=121.96 Aligned_cols=167 Identities=17% Similarity=0.150 Sum_probs=106.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---CC
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (436)
..|+|.+|+++ +|||+|||+.+ .+.|+++. .+.+.++-+..|+. +||||||++.+. ..
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 27 KRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 58999999987 99999999975 46666643 23456666666654 499999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCCCCC
Q 013804 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+. +.........+.. ....|.|+|
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 6677776443 246899999999975432 12233333222211111 0000011113333 246789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. +|.++||+|++ ++.....+....+....+|+++.++
T Consensus 184 GgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYG---RNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TSEEEE-TTEEEEEEEEE---CTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred CchheE-eeEEEEEEeEe---cCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999995 67999999997 3322335566777888888877554
No 64
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.53 E-value=9.3e-13 Score=124.01 Aligned_cols=173 Identities=21% Similarity=0.204 Sum_probs=111.4
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC---------CCeEEEEEcCCC---
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAPK--- 210 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~~--- 210 (436)
..|+|.||+++ +|||+|||+.....+.|+++. ++.+.++-+..|+. +||||||++.+.
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1bru_P 28 HTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLT 106 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCC
T ss_pred eEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 57999999987 999999999865678888753 23456665666643 699999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC--CC-CCcccEEEE----ccccCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQT----DAAINPG 277 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~----~~~i~~G 277 (436)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... .+ ......+.. ....|.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (241)
T 1bru_P 107 DKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNG 186 (241)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTT
T ss_pred CccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCC
Confidence 246677775443 356799999999975322 2233333332222211110 00 011223333 2357899
Q ss_pred CCCCeEECC--CC--cEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhccc
Q 013804 278 NSGGPLLDS--SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 278 ~SGGPlvd~--~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+|||||+.. +| .++||+|++.. .|+.....+.+.-+...++|+++.++
T Consensus 187 DSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 187 DSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999999843 56 79999999753 34433345666777888888877654
No 65
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.53 E-value=1.5e-13 Score=128.06 Aligned_cols=168 Identities=14% Similarity=0.169 Sum_probs=108.2
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecC-------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---CCCcc
Q 013804 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLRP 215 (436)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~~ 215 (436)
.|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++-+..|+. +||||||++.+. ..+.|
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 101 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKK 101 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCC
T ss_pred EEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceee
Confidence 7999999987 9999999995 566777643 23455555556654 599999998764 24677
Q ss_pred eecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC-CCCCcccEEEE-----ccccCCCCCCCeE
Q 013804 216 IPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----DAAINPGNSGGPL 283 (436)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~-~~~~~~~~i~~-----~~~i~~G~SGGPl 283 (436)
+.|... ....|+.++++||..... .......+.-+....+... ........+.. ....|.|+|||||
T Consensus 102 icL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 180 (224)
T 2qxi_A 102 VRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPL 180 (224)
T ss_dssp CCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEE
T ss_pred EECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccE
Confidence 778644 356899999999975421 1222222222221111000 00001123332 2467899999999
Q ss_pred ECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 284 LDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 284 vd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+. +|+++||+|++...|+.....+.+..+...++|+++.++
T Consensus 181 ~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 181 VC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp EE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred EE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 95 789999999874445433445667778888888887654
No 66
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.52 E-value=6.5e-13 Score=123.68 Aligned_cols=168 Identities=20% Similarity=0.163 Sum_probs=107.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ .+.|+++. .+.+.++-+..|+. +||||||++.+. .
T Consensus 26 ~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (224)
T 1cgh_A 26 QSRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNR 102 (224)
T ss_dssp SCEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCC
Confidence 368999999987 99999999976 45666542 24566666666665 499999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+||
T Consensus 103 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 182 (224)
T 1cgh_A 103 NVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSG 182 (224)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTT
T ss_pred ceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCc
Confidence 46677776443 356899999999975431 223333332222111110 000011113333 2467899999
Q ss_pred CeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||+. +|.++||+|++.. + ....+....+....+|+++.++
T Consensus 183 gPL~~-~~~l~Gi~S~g~~-~--~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 183 GPLLC-NNVAHGIVSYGKS-S--GVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp CEEEE-TTEEEEEEEECCT-T--CCSCEEEEEGGGGHHHHHHHHH
T ss_pred cceEE-ccEEEEEEEEECC-C--CCCCeEEEEHHHhHHHHHHHhh
Confidence 99995 6799999998752 2 2234556777778888876543
No 67
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.52 E-value=6e-13 Score=124.79 Aligned_cols=171 Identities=18% Similarity=0.212 Sum_probs=110.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcC---------CCCeEEEEEcCCC---
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (436)
..|+|.+|+++ +|||+|||+.+...+.|+++. .+.+.++-+..|+ .+||||||++.+.
T Consensus 28 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~ 106 (236)
T 1elt_A 28 HTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLN 106 (236)
T ss_dssp EEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCS
T ss_pred eEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccC
Confidence 57999999987 999999999887888888753 2345566566654 5699999998753
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC--CC-CCcccEEEE---ccccCCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQT---DAAINPGN 278 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~---~~~i~~G~ 278 (436)
..+.|+.|.... .+..|+.++++||+.... .......+.-+....+... .+ ......+.. ....|.|+
T Consensus 107 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 186 (236)
T 1elt_A 107 SAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGD 186 (236)
T ss_dssp SSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTC
T ss_pred CcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCC
Confidence 246677776443 356799999999985432 1222222222222111110 00 011223332 24678999
Q ss_pred CCCeEECC-CC--cEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhc
Q 013804 279 SGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 279 SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
|||||+-. +| .++||+|++.. .|+.....+.+..+....+|+++.
T Consensus 187 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (236)
T 1elt_A 187 SGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGI 235 (236)
T ss_dssp TTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHhh
Confidence 99999853 56 79999998742 454334456667777777887653
No 68
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.51 E-value=3.2e-13 Score=127.07 Aligned_cols=173 Identities=16% Similarity=0.198 Sum_probs=111.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcC---------CCCeEEEEEcCCC---
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (436)
..|+|.||+++ +|||+|||+.+...+.|+++. .+.+.++-+..|+ .+||||||++.+.
T Consensus 28 ~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 28 HTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred ceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 57999999987 999999999887788888753 2345566566665 5699999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC--CC-CCcccEEEE----ccccCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQT----DAAINPG 277 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~----~~~i~~G 277 (436)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... .+ ......+.. ....|.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 245667675443 356799999999975432 1222222222221111110 00 011223333 2457899
Q ss_pred CCCCeEECC-CC--cEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhccc
Q 013804 278 NSGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 278 ~SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+|||||+-. +| .++||+|++.. .|+.....+.+..+....+|+++.++
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 999999843 56 89999998753 34433345666777888888877553
No 69
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.51 E-value=3.4e-13 Score=125.19 Aligned_cols=169 Identities=17% Similarity=0.196 Sum_probs=108.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ .+.|+++. .+.+.++-+..|+. +||||||++.+. .
T Consensus 22 ~~~C~GtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~ 98 (223)
T 4i8h_A 22 YHFCGGSLINSQ-WVVSAAHCYKS--GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNS 98 (223)
T ss_dssp SEEEEEEECSSS-EEEECGGGCCS--SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEEcCC-EEEecHHhCCC--CcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCC
Confidence 467999999987 99999999975 34455432 23455666666664 599999998753 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCC
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNS 279 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~S 279 (436)
.+.|+.|... ....|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+|
T Consensus 99 ~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 177 (223)
T 4i8h_A 99 RVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDS 177 (223)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCT
T ss_pred ceeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCC
Confidence 4677778544 467899999999975432 112323332222111110 000111233333 246789999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. +++++||+|++.. ++.....+.+..+...++|+++.++
T Consensus 178 GgPl~~-~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 178 GGPVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCEEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcEEE-CCEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999995 6799999998754 3333345667788888888887654
No 70
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.50 E-value=1.4e-12 Score=122.59 Aligned_cols=175 Identities=13% Similarity=0.146 Sum_probs=111.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecC-----------CcEEeeEEEEEcC-CCCeEEEEEcCCC---CCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKL 213 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~ 213 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|+++. .+.+..+-+.+++ .+|||||+++.+. ..+
T Consensus 22 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v 100 (240)
T 1si5_H 22 KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFV 100 (240)
T ss_dssp SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSC
T ss_pred CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCce
Confidence 468999999987 999999999764 467777743 1234444444554 6899999998763 246
Q ss_pred cceecCCC-CCCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCCC-CC--CcccEEEE-----ccccCCCCCC
Q 013804 214 RPIPIGVS-ADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT-GR--PIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 214 ~~~~l~~~-~~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~~-~~--~~~~~i~~-----~~~i~~G~SG 280 (436)
.|+.|... ..+..|+.+++.||..... .......+.-+....+.... .. .....+.. ....|.|+||
T Consensus 101 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 180 (240)
T 1si5_H 101 STIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYG 180 (240)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTT
T ss_pred eccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCC
Confidence 67777643 3456799999999975432 22333333322222111100 00 11222322 2467899999
Q ss_pred CeEECCCC---cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccccc
Q 013804 281 GPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (436)
Q Consensus 281 GPlvd~~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g 327 (436)
|||+..++ .++||++++.. |+.....+.+..+...++|+++.++..
T Consensus 181 gPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~~~ 229 (240)
T 1si5_H 181 GPLVCEQHKMRMVLGVIVPGRG-CAIPNRPGIFVRVAYYAKWIHKIILTY 229 (240)
T ss_dssp CEEEEECSSSEEEEEEECSCSC-SSCTTCCEEEEEGGGGHHHHHHHHSSC
T ss_pred CcEEEEECCcEEEEEEEEECCC-CCCCCCCcEEEEHHHHHHHHHHHHhcc
Confidence 99995432 79999998753 433334566778888889998876543
No 71
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.50 E-value=1.4e-12 Score=121.09 Aligned_cols=182 Identities=16% Similarity=0.161 Sum_probs=112.8
Q ss_pred CCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEc
Q 013804 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD 196 (436)
Q Consensus 126 ~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d 196 (436)
.|-+|.|......+ ....|+|.+|+++ +|||+|||+.. .+.|+++. .+.+.++.+..|
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~h 78 (224)
T 3rp2_A 12 RPYMAHLDIVTEKG----------LRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIH 78 (224)
T ss_dssp CTTEEEEEEECTTS----------CEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCC----------cEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEEC
Confidence 46677776532111 1457999999987 99999999954 56666642 234566666666
Q ss_pred CC-------CCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCC
Q 013804 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT 260 (436)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~ 260 (436)
+. +||||||++.+. ..+.++.|.... .+..|+.+++.||..... .......+.-+....+....
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (224)
T 3rp2_A 79 ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYR 158 (224)
T ss_dssp TTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTT
T ss_pred CCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcccc
Confidence 65 599999998764 245666665433 356899999999874321 12222223222222121101
Q ss_pred CCCcccEEEE-----ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 261 GRPIQDVIQT-----DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 261 ~~~~~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
.......+.. ....|.|+|||||+. ++.++||+|++... ... .+.+..+...++|+++.+
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c-~~~--p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 159 YYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPD-AKP--PAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTT-CCS--CEEEEEHHHHHHHHHHHH
T ss_pred ccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCC-CCC--CcEEEEHHHhHHHHHHHh
Confidence 1111222332 235788999999995 67999999987643 222 556677777888887654
No 72
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.49 E-value=2.3e-12 Score=119.83 Aligned_cols=168 Identities=18% Similarity=0.193 Sum_probs=107.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+. ..+.|+++. ++.+.++-+..|+. +||||||++.+. .
T Consensus 27 ~~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~ 103 (227)
T 3fzz_A 27 KMFCGGFLVRDK-FVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTR 103 (227)
T ss_dssp EEEEEEEEEETT-EEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred eeEEEEEEEeCC-EEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCC
Confidence 457999999987 9999999995 356666642 23456666666765 499999998754 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGN 278 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~ 278 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+. +.........+.. ....|.|+
T Consensus 104 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gD 183 (227)
T 3fzz_A 104 AVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEED 183 (227)
T ss_dssp TBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTT
T ss_pred cccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccC
Confidence 45677775433 356899999999974322 12233333322211111 0000111223332 24578999
Q ss_pred CCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||||+. ++.++||+|++... +. ..+.+..+...++|+++.++
T Consensus 184 sGgPl~~-~~~l~Gi~S~g~~c-~~--~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 184 SGGPLVC-KRAAAGIVSYGQTD-GS--APQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp TTCEEEE-TTEEEEEEEECCTT-CS--SSEEEEEGGGTHHHHHHHHT
T ss_pred CccceEE-ecCCcEEEEECCCC-CC--CCeEEEEhHHhHHHHHHHHh
Confidence 9999995 67999999987643 22 25666777888888877654
No 73
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.49 E-value=2.1e-12 Score=120.40 Aligned_cols=168 Identities=19% Similarity=0.170 Sum_probs=105.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ .+.|+++. .+.+.++-+..|+. +||||||++.+. .
T Consensus 26 ~~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 102 (227)
T 1euf_A 26 SHICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITD 102 (227)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCS
T ss_pred ceEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCC
Confidence 357999999987 99999999975 46666642 23455665666654 599999998763 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNS 279 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~-~~~~~~~i~~~-----~~i~~G~S 279 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+... ...+.|+|
T Consensus 103 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDs 182 (227)
T 1euf_A 103 KVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDS 182 (227)
T ss_dssp SCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred ceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCC
Confidence 46677776433 356899999999975332 12233333222221111100 01112233332 23458999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||||+. +|.++||+|++ ++.....+...-+...++|+++.++
T Consensus 183 GgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 183 GGPLVC-NGVAQGIVSYG---RNDGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp TCEEEE-TTEEEEEEEEC---CTTCCSCEEEEEGGGTHHHHHHHTC
T ss_pred CCceEE-CCEEEEEEEEe---CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 999995 68999999987 3322335566777788888877654
No 74
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.49 E-value=8.9e-13 Score=123.56 Aligned_cols=174 Identities=13% Similarity=0.116 Sum_probs=109.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecC-----------CcEEeeEEEEEcC-CCCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++. .+.+...-+..++ .+|||||+++.+. .
T Consensus 21 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~ 99 (234)
T 2asu_B 21 QHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQ 99 (234)
T ss_dssp CEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSS
T ss_pred CEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCC
Confidence 568999999987 99999999965 3456777642 1234555555555 5799999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCCCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. .........+.. ....|.|+||
T Consensus 100 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 179 (234)
T 2asu_B 100 RVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYG 179 (234)
T ss_dssp SSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTT
T ss_pred cEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCC
Confidence 46677776443 356799999999975432 223333333222111110 001111223332 2367899999
Q ss_pred CeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 281 GPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 281 GPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
|||+.. +| .++||+|++.. |+.....+.+..+...++|+++.++.
T Consensus 180 gPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 227 (234)
T 2asu_B 180 GPLACFTHNSWVLEGIIIPNRV-CARSRWPAVFTRVSVFVDWIHKVMRL 227 (234)
T ss_dssp CEEEEEETTEEEEEEEECCCSS-SSCTTCCEEEEEGGGSHHHHHHHC--
T ss_pred CceEEEECCeEEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHhhc
Confidence 999853 23 79999998753 43333456677888888888876553
No 75
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.49 E-value=5.4e-14 Score=116.96 Aligned_cols=93 Identities=26% Similarity=0.433 Sum_probs=76.8
Q ss_pred ceecceecceeeecc--hhhhhcCc---------cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC
Q 013804 327 GKVTRPILGIKFAPD--QSVEQLGV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (436)
Q Consensus 327 g~v~~~~lGv~~~~~--~~~~~~g~---------~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s 395 (436)
|++.|+|||+.+.+. ..++++++ .|++|..|.++|||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQN 69 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCC
Confidence 567899999999863 23444443 799999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 013804 396 GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 433 (436)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 433 (436)
+.++..++.. |+.+.++|.|+|+.+++++++...+
T Consensus 70 ~~~~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~~ 104 (113)
T 2pzd_A 70 AEDVYEAVRT---QSQLAVQIRRGRETLTLYVTPEVTE 104 (113)
T ss_dssp HHHHHHHHHH---CSSEEEEEEETTEEEEEEECCEEC-
T ss_pred HHHHHHHHhC---CCeEEEEEEECCEEEEEEEEEeecc
Confidence 9999998876 5789999999999999998887543
No 76
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.48 E-value=8e-14 Score=128.89 Aligned_cols=159 Identities=18% Similarity=0.194 Sum_probs=101.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeE----EEEecC------CcEEeeEEEEEcC--------CCCeEEEEEcCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDI----RVTFAD------QSAYDAKIVGFDQ--------DKDVAVLRIDAPK 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i----~V~~~d------g~~~~a~vv~~d~--------~~DlAlLkv~~~~ 210 (436)
...|+|++|+++ +|||+|||+.+. ..+ .|+++. +..+.++.+..|+ .+||||||++.+.
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI 107 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCC
Confidence 468999999987 999999999653 334 666643 2245566555543 4599999998742
Q ss_pred -CCCcceecCCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEEC
Q 013804 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (436)
Q Consensus 211 -~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd 285 (436)
..+.++.|... ....|+.++++||+.... .......+..+... .+.....+...|.|+|||||+.
T Consensus 108 ~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~---------~c~~~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTRE---------DTNLAYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEE---------CSSEEEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcc---------cchheeeccccCCCCCCCeeEc
Confidence 13567777544 357899999999973211 11111111111111 1122224677899999999998
Q ss_pred CCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhc
Q 013804 286 SSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
.+|.++||+|++.. ++ ...+....+....+|+++.
T Consensus 178 ~~g~lvGi~S~g~~-c~--~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 178 QNQQIVGVHNAGYS-NG--TINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TTSCEEEECCEEEG-GG--TEEEEEBCCHHHHHHHHHH
T ss_pred cCCeEEEEEecccC-CC--ccCceeEechHHHHHHHHH
Confidence 78999999998865 22 2334445566666777654
No 77
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.48 E-value=5.1e-13 Score=125.59 Aligned_cols=171 Identities=15% Similarity=0.190 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCC--CCeEEEEecC--------CcEEeeEEEEEcCCC---------CeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD--------QSAYDAKIVGFDQDK---------DVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~d--------g~~~~a~vv~~d~~~---------DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++. ++.+.++.+..|+.+ ||||||++.+.
T Consensus 26 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~ 104 (241)
T 1m9u_A 26 SHSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSIS 104 (241)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCC
T ss_pred eeeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCccc
Confidence 368999999987 99999999986 4567787742 345667766777655 99999998764
Q ss_pred --CCCcceecCCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCC-CC--CcccEEEE-----cc
Q 013804 211 --DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT-GR--PIQDVIQT-----DA 272 (436)
Q Consensus 211 --~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~-~~--~~~~~i~~-----~~ 272 (436)
..+.|+.|... .....|+.+++.||..... .......+.-+....+. +.. .. .....+.. ..
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~ 184 (241)
T 1m9u_A 105 LGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNT 184 (241)
T ss_dssp CCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCC
T ss_pred cCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCC
Confidence 24677777654 3233799999999975432 22333333222211111 000 00 11233333 23
Q ss_pred ccCCCCCCCeEECCCC--cEEEEEee--ee-cCCCCCCcceeeeeeeccchhhhh
Q 013804 273 AINPGNSGGPLLDSSG--SLIGINTA--IY-SPSGASSGVGFSIPVDTVNGIVDQ 322 (436)
Q Consensus 273 ~i~~G~SGGPlvd~~G--~VVGI~s~--~~-~~~~~~~~~~~aIP~~~i~~~l~~ 322 (436)
..|.|+|||||+..+| .++||+|+ .. ..+......+....+....+|+++
T Consensus 185 ~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 185 GACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp BCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred eeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 6789999999985435 89999998 32 223322345666777777777765
No 78
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.48 E-value=1.2e-12 Score=123.33 Aligned_cols=172 Identities=19% Similarity=0.220 Sum_probs=110.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----------------CCeEEEEecC---------CcEEeeEEEEEcCC-------
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG----------------ASDIRVTFAD---------QSAYDAKIVGFDQD------- 198 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----------------~~~i~V~~~d---------g~~~~a~vv~~d~~------- 198 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++. ++.+.++-+..|+.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 24 QPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp CEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred CeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 468999999987 99999999954 3457777653 23455666677765
Q ss_pred CCeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeecc--CCC--CCCcccE
Q 013804 199 KDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT--GRPIQDV 267 (436)
Q Consensus 199 ~DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~--~~~--~~~~~~~ 267 (436)
+|||||+++.+. ..+.|+.|... ....|+.+++.||..... .......+.-+....+. +.. .......
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 599999998753 34567777544 347899999999975432 22233333222211111 000 0111223
Q ss_pred EEE-----ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 268 IQT-----DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 268 i~~-----~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+.. ....|.|+|||||+.. +| .++||+|++.. |+.....+.+..+...++|+++.++
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 248 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDD-CGKKDRYGVYSYIHHNKDWIQRVTG 248 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCSSCCEEEEETTTTHHHHHHHHC
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCC-CCCCCCCEEEEEHHHhHHHHHHHhc
Confidence 333 2467899999999842 34 59999999843 4433445667788888888887543
No 79
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.48 E-value=2.1e-12 Score=120.69 Aligned_cols=171 Identities=12% Similarity=0.179 Sum_probs=107.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC-----CcEEeeEEEEEcCC-------CCeEEEEEcCCC---CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-----g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|.++. +..+.++.+..|+. +||||||++.+. ..
T Consensus 23 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 101 (232)
T 2oq5_A 23 SHRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNA 101 (232)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSS
T ss_pred CeeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCc
Confidence 468999999987 999999999763 356777642 33455665666653 599999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC---CCCCcccEEEE-----ccccCCCC
Q 013804 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA---TGRPIQDVIQT-----DAAINPGN 278 (436)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~---~~~~~~~~i~~-----~~~i~~G~ 278 (436)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+.. ....|.|+
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 181 (232)
T 2oq5_A 102 VHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGD 181 (232)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTC
T ss_pred eeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCC
Confidence 6677776433 356799999999975332 2233333332222222110 00111233333 24678999
Q ss_pred CCCeEECC--CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhc
Q 013804 279 SGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 279 SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
|||||+.. +| .++||+|++.. ++.....+.+.-+...++|+++.
T Consensus 182 sGgPL~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 182 SGGPLVSSDARDIWYLAGIVSWGDE-CAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp TTCEEEEECTTSCEEEEEEEEECSS-SSBTTBCEEEEETGGGHHHHHHH
T ss_pred CCCcEEEECCCCCEEEEEEEEeCCC-CCCCCCCeEEEEhHHhHHHHHHH
Confidence 99999853 23 59999998753 33223455667777788888764
No 80
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.48 E-value=1.1e-12 Score=124.13 Aligned_cols=174 Identities=18% Similarity=0.239 Sum_probs=110.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.||+++ +|||+|||+.+...+.|+++. +..+.++-+..|+. +||||||++.+. .
T Consensus 24 ~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (250)
T 1aut_C 24 KLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQ 102 (250)
T ss_dssp CEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred ceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 468999999987 999999999887777887753 23455666666654 599999998764 2
Q ss_pred CCcceecCCCC-----CCCCCCEEEEEecCCCCCC----------ceeEeEEeeeeeeeccC-CCCCCcccEEEE-----
Q 013804 212 KLRPIPIGVSA-----DLLVGQKVYAIGNPFGLDH----------TLTTGVISGLRREISSA-ATGRPIQDVIQT----- 270 (436)
Q Consensus 212 ~~~~~~l~~~~-----~~~~G~~V~~vG~p~g~~~----------~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~----- 270 (436)
.+.|+.|.... ....|+.+++.||+..... ......+.-+....+.. .........+..
T Consensus 103 ~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~ 182 (250)
T 1aut_C 103 TIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGD 182 (250)
T ss_dssp TBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTC
T ss_pred ceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCC
Confidence 35666665321 2357999999999753221 12222222221111100 000111233333
Q ss_pred ccccCCCCCCCeEECC-CCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 DAAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 ~~~i~~G~SGGPlvd~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+.. +|+ ++||+|++.. |+.....+.+..+....+|+++.++.
T Consensus 183 ~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 240 (250)
T 1aut_C 183 RQDACEGDSGGPMVASFHGTWFLVGLVSWGEG-CGLLHNYGVYTKVSRYLDWIHGHIRD 240 (250)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred CCCCCCCCCchheEEEECCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence 2467899999999853 564 9999998753 43333456667788888888876654
No 81
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.47 E-value=3.3e-12 Score=120.07 Aligned_cols=173 Identities=17% Similarity=0.202 Sum_probs=108.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC---------CCeEEEEEcCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP 209 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~ 209 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|.++. ++.+.++-+..|+. +|||||+++.+
T Consensus 28 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~ 106 (247)
T 3mhw_U 28 TYVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSK 106 (247)
T ss_dssp EEEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECT
T ss_pred ceEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCc
Confidence 357999999987 999999999653 357777643 23456666666654 49999999865
Q ss_pred -------CCCCcceecCCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC--C-CCCcccEEEE--
Q 013804 210 -------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQT-- 270 (436)
Q Consensus 210 -------~~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~--~-~~~~~~~i~~-- 270 (436)
...+.++.|... ..+..|+.+++.||..... .......+.-+....+... . .......+..
T Consensus 107 ~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~ 186 (247)
T 3mhw_U 107 EGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAAD 186 (247)
T ss_dssp TSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEEC
T ss_pred cccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCC
Confidence 134667777543 4466799999999975432 1233333332222211110 0 0011223332
Q ss_pred ---ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 ---DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 ---~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+.. +| .++||+|++.. ++.....+.+..+...++|+++.++
T Consensus 187 ~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 246 (247)
T 3mhw_U 187 PQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTK 246 (247)
T ss_dssp TTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGCHHHHHHHTT
T ss_pred CCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 2467899999999843 34 49999998753 3333345667778888888877543
No 82
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.47 E-value=2.6e-12 Score=120.42 Aligned_cols=170 Identities=15% Similarity=0.185 Sum_probs=106.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--------CeEEEEecC----------CcEEeeEEEEEcC-------CCCeEEEEE
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGA--------SDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRI 206 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--------~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv 206 (436)
..|+|.+|+++ +|||+|||+.+. ..+.|.++. .+.+.++-+..|+ .+||||||+
T Consensus 25 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L 103 (241)
T 3ncl_A 25 HICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103 (241)
T ss_dssp EEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred eEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 57999999987 999999999653 356676642 2446666666676 459999999
Q ss_pred cCCC---CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC-CCCCcccEEEE-----c
Q 013804 207 DAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----D 271 (436)
Q Consensus 207 ~~~~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~-~~~~~~~~i~~-----~ 271 (436)
+.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+.. .
T Consensus 104 ~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 183 (241)
T 3ncl_A 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGG 183 (241)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCS
T ss_pred CCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCC
Confidence 8764 245677775433 355799999999974322 1223333322221111100 00111223332 3
Q ss_pred cccCCCCCCCeEE--CCCCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhc
Q 013804 272 AAINPGNSGGPLL--DSSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 272 ~~i~~G~SGGPlv--d~~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
...|.|+|||||+ +.+|+ ++||+|++.. ++.....+.+..+...++|+++.
T Consensus 184 ~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 184 VDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG-CAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp SBCCTTCTTCEEEEECTTSCEEEEEEEEECSS-SSCTTCCEEEEESGGGHHHHHHH
T ss_pred CccCCCcCCCCEEEEcCCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHH
Confidence 4678999999997 34565 8999998754 33333456677778888888764
No 83
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.47 E-value=3.4e-12 Score=120.90 Aligned_cols=173 Identities=16% Similarity=0.172 Sum_probs=109.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC----------cEEeeEEEEEcCC-------CCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ----------SAYDAKIVGFDQD-------KDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg----------~~~~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (436)
...|+|.+|+++ +|||+|||+.+...+.|+++.. +.+.++.+..|+. +||||||++.+.
T Consensus 40 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~ 118 (251)
T 1pyt_D 40 RHTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELG 118 (251)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCC
T ss_pred ceEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccC
Confidence 467999999987 9999999999888888887532 2355565666654 599999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeeeeeccCC---CCCCcccEEEEc----cccCCC
Q 013804 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAA---TGRPIQDVIQTD----AAINPG 277 (436)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~vs~~~~~~~~~~---~~~~~~~~i~~~----~~i~~G 277 (436)
..+.|+.|.... .+..|+.+++.||...... ......+.-+....+... ........+... ...|.|
T Consensus 119 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 198 (251)
T 1pyt_D 119 DTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNG 198 (251)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCS
T ss_pred CCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCC
Confidence 246677776443 3467899999999754221 122222222221111110 001112333332 357899
Q ss_pred CCCCeEECC-CC--cEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhcc
Q 013804 278 NSGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 278 ~SGGPlvd~-~G--~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
+|||||+.. +| .++||+|++.. .++.....+.+.-+....+|+++.+
T Consensus 199 DSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 199 DSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp CTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred CCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 999999853 45 69999999752 3443334566677777888887654
No 84
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.47 E-value=1.9e-12 Score=122.16 Aligned_cols=174 Identities=17% Similarity=0.214 Sum_probs=110.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcC--------CCCeEEEEEcCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ--------DKDVAVLRIDAP- 209 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv~~~- 209 (436)
...|+|.||+++ ||||+|||+.+. ..+.|+++. .+.+..+-+..|+ .+||||||++.+
T Consensus 22 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~ 100 (248)
T 2r0l_A 22 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 100 (248)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSS
T ss_pred CceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcc
Confidence 468999999987 999999999765 467888753 2345555554443 359999999875
Q ss_pred ---C---CCCcceecCCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC--CC-CCcccEEEE---
Q 013804 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQT--- 270 (436)
Q Consensus 210 ---~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~--- 270 (436)
. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....+... .. ......+..
T Consensus 101 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 180 (248)
T 2r0l_A 101 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 180 (248)
T ss_dssp SCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCC
Confidence 1 24667777543 3456799999999975432 2233333332222211110 00 011233333
Q ss_pred --ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+.. +| .++||+|++.. |+.....+.+..+...++|+++.++.
T Consensus 181 ~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 240 (248)
T 2r0l_A 181 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIRP 240 (248)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred CCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCC-CCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence 2467899999999854 45 59999998753 44334456677888888888876653
No 85
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.47 E-value=4.3e-12 Score=121.95 Aligned_cols=172 Identities=18% Similarity=0.232 Sum_probs=106.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC------CeEEEEecC--------------------CcEEeeEEEEEcC-------
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA------SDIRVTFAD--------------------QSAYDAKIVGFDQ------- 197 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~------~~i~V~~~d--------------------g~~~~a~vv~~d~------- 197 (436)
...|+|.||+++ ||||||||+.+. ....|+++. ...+.++-+..|+
T Consensus 50 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 128 (278)
T 2olg_A 50 QFACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSK 128 (278)
T ss_dssp EEEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCS
T ss_pred ceeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCC
Confidence 457999999987 999999999762 346676642 1234455455553
Q ss_pred --CCCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCCCC----CC
Q 013804 198 --DKDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----RP 263 (436)
Q Consensus 198 --~~DlAlLkv~~~~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~~~----~~ 263 (436)
.+||||||++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+..... ..
T Consensus 129 ~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~ 208 (278)
T 2olg_A 129 DRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRV 208 (278)
T ss_dssp SCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCC
T ss_pred CCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccC
Confidence 3699999998763 246677776443 357899999999975432 122222332222221111000 01
Q ss_pred cccEEEE----ccccCCCCCCCeEECC--CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 264 IQDVIQT----DAAINPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 264 ~~~~i~~----~~~i~~G~SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
....+.. ....|.|+|||||+-. +| .++||+|++.. |+.....+...-+....+|+++.+
T Consensus 209 ~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i 276 (278)
T 2olg_A 209 RSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGAT-CGTEGWPGIYTKVGKYRDWIEGNI 276 (278)
T ss_dssp CTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCB-CSTTCBCEEEEEGGGGHHHHHTTC
T ss_pred CCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCC-CCCCCCCcEEeEHHHHHHHHHHhh
Confidence 1223333 2357899999999853 34 59999999743 443333556677778888887654
No 86
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.46 E-value=1.1e-12 Score=122.96 Aligned_cols=172 Identities=20% Similarity=0.208 Sum_probs=108.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC--
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK-- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-- 210 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|+++. .+.+.++-+..|+. +||||||++.+.
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 103 (238)
T 1ym0_A 25 SHFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITF 103 (238)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCC
T ss_pred ceEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCccc
Confidence 468999999987 999999999764 567787753 23456666666653 599999998764
Q ss_pred -CCCcceecCCCCCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeecc--CCCCCCcccEEEEc-------ccc
Q 013804 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQTD-------AAI 274 (436)
Q Consensus 211 -~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~~-------~~i 274 (436)
..+.|+.|........++.+++.||..... .......+.-+....+. +.........+... ...
T Consensus 104 ~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~ 183 (238)
T 1ym0_A 104 DINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDS 183 (238)
T ss_dssp SSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBC
T ss_pred cCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCcc
Confidence 246677776543333789999999975432 12233333222211111 00001112233321 568
Q ss_pred CCCCCCCeEECC--CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 275 NPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 275 ~~G~SGGPlvd~--~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|.|+|||||+.. +| .++||+|++.. |+ ....+.+..+...++|+++.++
T Consensus 184 C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~-C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 184 CQGDSGGPLSVKDGSGIFSLVGIVSWGIG-CA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp CTTTTTCEEEEECTTCCEEEEEEEEECSS-SS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCCccCCeeEEECCCCCEEEEEEEeECCC-CC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 999999999853 35 69999998753 43 3345566777778888877554
No 87
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.46 E-value=1.8e-12 Score=121.90 Aligned_cols=173 Identities=18% Similarity=0.230 Sum_probs=109.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
...|+|.||+++ +|||+|||+.+. ..+.|.++. ...+.++-+..|+. +|||||+++.+.
T Consensus 26 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 104 (241)
T 2any_A 26 RHLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLE 104 (241)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCccc
Confidence 467999999987 999999999764 456676532 23455666666654 599999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCC-C-CCcccEEEE-----ccccC
Q 013804 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-G-RPIQDVIQT-----DAAIN 275 (436)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~-~-~~~~~~i~~-----~~~i~ 275 (436)
..+.|+.|.... ....|+.+++.||..... .......+.-+....+.... . ......+.. ....|
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C 184 (241)
T 2any_A 105 YTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDAC 184 (241)
T ss_dssp CBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCC
T ss_pred CCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccC
Confidence 245677775433 356799999999975432 12233333222221111100 0 011233333 24578
Q ss_pred CCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
.|+|||||+.. +| .++||+|++.. +......+.+..+...++|+++.++
T Consensus 185 ~GDsGgPl~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 185 KGDSGGPLVCKHNGMWRLVGITSWGEG-CARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCCCcEEEEECCEEEEEEEEEecCC-CCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 99999999853 45 69999998753 3333345667778888888887654
No 88
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.46 E-value=9.1e-13 Score=123.49 Aligned_cols=174 Identities=16% Similarity=0.174 Sum_probs=110.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecCC-------cEEeeEEEEEcC--------CCCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++.. ..+..+.+..|+ .+||||||++.+.
T Consensus 21 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~ 99 (242)
T 3tvj_B 21 GTTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV 99 (242)
T ss_dssp SEEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCC
T ss_pred CCcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCccc
Confidence 458999999987 99999999954 45677776532 334455555554 3599999998764
Q ss_pred --CCCcceecCCCC---CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccC--C-----CCCCcccEEEE----
Q 013804 211 --DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA--A-----TGRPIQDVIQT---- 270 (436)
Q Consensus 211 --~~~~~~~l~~~~---~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~--~-----~~~~~~~~i~~---- 270 (436)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. . ........+..
T Consensus 100 ~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~ 179 (242)
T 3tvj_B 100 INSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLES 179 (242)
T ss_dssp CBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTT
T ss_pred cCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCC
Confidence 356777776543 257899999999975432 122333332222111100 0 00111233333
Q ss_pred -ccccCCCCCCCeEEC---CCC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 -DAAINPGNSGGPLLD---SSG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 -~~~i~~G~SGGPlvd---~~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+. .+| .++||+|++...|+.....+.+..+...++|+++.++
T Consensus 180 ~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 180 GGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp CCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 246789999999984 233 3999999985555544445667778888888877653
No 89
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.46 E-value=8e-14 Score=115.81 Aligned_cols=93 Identities=28% Similarity=0.499 Sum_probs=79.4
Q ss_pred ceecceecceeeecc--hhhhhcC---------ccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC
Q 013804 327 GKVTRPILGIKFAPD--QSVEQLG---------VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (436)
Q Consensus 327 g~v~~~~lGv~~~~~--~~~~~~g---------~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s 395 (436)
|++.++|||+.+.+. ..++.++ ..|++|..+.+++||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQD-----------GDIIVKVNGRPLVD 69 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCC
Confidence 567889999999863 2344443 2699999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 013804 396 GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 433 (436)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 433 (436)
+.++..++. .|+++.++|.|+|+.+++++++...+
T Consensus 70 ~~~~~~~l~---~g~~v~l~v~R~g~~~~~~v~~~~~~ 104 (112)
T 2p3w_A 70 SSELQEAVL---TESPLLLEVRRGNDDLLFSIAPEVVM 104 (112)
T ss_dssp HHHHHHHHH---HCSSEEEEEEETTEEEEEEECCEEEC
T ss_pred HHHHHHHHh---CCCeEEEEEEECCEEEEEEEEEeeeC
Confidence 999998883 47889999999999999998887554
No 90
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.46 E-value=2.7e-12 Score=119.12 Aligned_cols=169 Identities=15% Similarity=0.163 Sum_probs=106.2
Q ss_pred EEEEEEEcCCCEEEecccccCCC---CeEEEEecC-------CcEEeeEEEEEcCCC-------CeEEEEEcCCCCCCcc
Q 013804 153 SGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-------QSAYDAKIVGFDQDK-------DVAVLRIDAPKDKLRP 215 (436)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-------g~~~~a~vv~~d~~~-------DlAlLkv~~~~~~~~~ 215 (436)
.|+|.+|+++ +|||+|||+.+. ..+.|+++. ...+.+..+..|+.+ ||||||++.+. .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 5999999987 999999999864 346676642 234556666666654 99999999875 5677
Q ss_pred eecCCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCCCCCCCeE
Q 013804 216 IPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNSGGPL 283 (436)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~SGGPl 283 (436)
+.+.... ...+..+++.||..... .......+.-+....+. +.........+.. ....|.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 7776443 34566999999975432 12333333222211111 0001111233332 2467899999999
Q ss_pred ECCC--C--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 284 LDSS--G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 284 vd~~--G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
+..+ | .++||+|++.. |+.....+.+..+....+|+++.++
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGEG-CARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp EEECTTSCEEEEEEEEEESS-SSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred EEecCCCCEEEEEEeccCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 8532 3 68999999854 4433345666777777888876554
No 91
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.45 E-value=3.6e-12 Score=118.98 Aligned_cols=171 Identities=17% Similarity=0.142 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC------cEEeeEEEEEcCC-------CCeEEEEEcCCC---CCCc
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ------SAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLR 214 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~ 214 (436)
...|+|.+|+++ +|||+|||+.+...+.|+++.. ..+..+-+..|+. +||||||++ +. ..+.
T Consensus 27 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~ 104 (230)
T 2hlc_A 27 RVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104 (230)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCC
T ss_pred CEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEe
Confidence 468999999987 9999999999877788887542 3445555555543 599999998 43 3467
Q ss_pred ceecCCCC---CCCCCCEEEEEecCCCCCC--ceeEeEEeeeeeeeccCCCC--CCcccEEEE----ccccCCCCCCCeE
Q 013804 215 PIPIGVSA---DLLVGQKVYAIGNPFGLDH--TLTTGVISGLRREISSAATG--RPIQDVIQT----DAAINPGNSGGPL 283 (436)
Q Consensus 215 ~~~l~~~~---~~~~G~~V~~vG~p~g~~~--~~~~G~vs~~~~~~~~~~~~--~~~~~~i~~----~~~i~~G~SGGPl 283 (436)
|+.|.... ....|+.+++.||...... ......+.-+....+..... ......+.. ....|.|+|||||
T Consensus 105 picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl 184 (230)
T 2hlc_A 105 PIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPF 184 (230)
T ss_dssp CCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEE
T ss_pred eeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCee
Confidence 77776443 2457899999999754322 22333222222211111000 111223332 2367899999999
Q ss_pred ECC-CCcEEEEEeeeec-CCCCCCcceeeeeeeccchhhhhcc
Q 013804 284 LDS-SGSLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 284 vd~-~G~VVGI~s~~~~-~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
+.. ++.++||++++.. .+. ....+....+....+|+++.+
T Consensus 185 ~~~~~~~l~Gi~S~g~~~~C~-~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 185 VLSDKNLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp EEGGGTEEEEEEEECCTTCTT-SCCCEEEEEGGGGHHHHHHHH
T ss_pred EECcCCEEEEEEEEeCCCCCC-CCCCCEEEEhHHhHHHHHHhh
Confidence 843 4589999998752 332 233455667777888887654
No 92
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.45 E-value=7.5e-13 Score=124.51 Aligned_cols=174 Identities=18% Similarity=0.197 Sum_probs=110.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.||+++ +|||+|||+.+...+.|+++. .+.+.++.+..|+. +|||||+++.+. .
T Consensus 24 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (241)
T 2jkh_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (241)
T ss_dssp CEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCC
Confidence 568999999987 999999999887778888753 23455666666654 499999998764 2
Q ss_pred CCcceecCCCC----CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccC-CCCCCcccEEEE-----ccccCC
Q 013804 212 KLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA-ATGRPIQDVIQT-----DAAINP 276 (436)
Q Consensus 212 ~~~~~~l~~~~----~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~-~~~~~~~~~i~~-----~~~i~~ 276 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. .........+.. ....|.
T Consensus 103 ~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (241)
T 2jkh_A 103 NVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQ 182 (241)
T ss_dssp TBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCT
T ss_pred CEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCc
Confidence 45677775322 145789999999974322 122222332222111110 000111223332 246789
Q ss_pred CCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 277 GNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 277 G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
|+|||||+.. +| .++||+|++.. ++.....+.+..+...++|+++.++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 183 GDSGGPHVTRFKDTYFVTGIVSWGEG-CARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp TTTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred CcCCCeeEEEECCEEEEEEEEEECCC-CCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 9999999853 45 59999998754 33333456677888888998886654
No 93
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.45 E-value=6e-12 Score=120.68 Aligned_cols=172 Identities=17% Similarity=0.198 Sum_probs=108.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC---------CCeEEEEEcCC-
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (436)
..|+|.||+++ ||||||||+.+. ..+.|+++. +..+.++-+..|+. +|||||+++.+
T Consensus 52 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 130 (276)
T 2jde_A 52 YVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130 (276)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTT
T ss_pred eeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCcc
Confidence 57999999987 999999999653 356777643 23456666666654 49999999865
Q ss_pred ------CCCCcceecCCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC--C-CCCcccEEEE---
Q 013804 210 ------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQT--- 270 (436)
Q Consensus 210 ------~~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~--~-~~~~~~~i~~--- 270 (436)
...+.|+.|... ..+..|+.+++.||..... .......+.-+....+... . .......+..
T Consensus 131 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 210 (276)
T 2jde_A 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 210 (276)
T ss_dssp SCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECT
T ss_pred ccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCC
Confidence 134667777543 3467799999999975432 1223333332222211110 0 0011223332
Q ss_pred --ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+.. +| .++||+|++.. ++.....+.+..+....+|+++.++
T Consensus 211 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 269 (276)
T 2jde_A 211 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTK 269 (276)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHTC-
T ss_pred CCCCcccccccCcceEEEeCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2467899999999843 34 49999999754 4333345667788888888887654
No 94
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.45 E-value=6e-12 Score=118.04 Aligned_cols=168 Identities=16% Similarity=0.214 Sum_probs=106.4
Q ss_pred EEEEEEEcCCCEEEecccccCCC-----CeEEEEecC-------C--cEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 153 SGSGFVWDSKGHVVTNYHVIRGA-----SDIRVTFAD-------Q--SAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~-----~~i~V~~~d-------g--~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
.|+|.+|+++ +|||+|||+.+. ..+.|.++. + +.+.++-+..|+. +||||||++.+.
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 107 (237)
T 2f91_A 29 FCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLT 107 (237)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCcc
Confidence 4999999987 999999999753 457777742 1 4456666666654 599999998764
Q ss_pred --CCCcceecCCCCCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCC
Q 013804 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINP 276 (436)
Q Consensus 211 --~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~ 276 (436)
..+.|+.|.... ...++.+++.||..... .......+.-+....+. +.........+.. ....|.
T Consensus 108 ~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 186 (237)
T 2f91_A 108 FNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186 (237)
T ss_dssp CBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCT
T ss_pred cCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCC
Confidence 246778886443 46789999999975422 12233333222211110 0000111233333 246789
Q ss_pred CCCCCeEECCCC---cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhc
Q 013804 277 GNSGGPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (436)
Q Consensus 277 G~SGGPlvd~~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l 323 (436)
|+|||||+..++ .++||+|++.. |+.....+.+..+...++|+++.
T Consensus 187 GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 187 GDSGGPLAASDTGSTYLAGIVSWGYG-CARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp TCTTCEEEECTTSSCEEEEEEEEESS-SSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CcCCCCeEEecCCCEEEEEEEEecCC-CCCCCCCcEEEEHHHhHHHHHHh
Confidence 999999995432 79999999754 43333455667777788887764
No 95
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.45 E-value=2.6e-12 Score=123.97 Aligned_cols=174 Identities=17% Similarity=0.214 Sum_probs=110.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcC--------CCCeEEEEEcCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ--------DKDVAVLRIDAP- 209 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv~~~- 209 (436)
...|+|.+|+++ ||||+|||+.+. ..+.|+++. .+.+.++.+..|+ .+|||||+++.+
T Consensus 57 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~ 135 (283)
T 1yc0_A 57 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 135 (283)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBT
T ss_pred CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCc
Confidence 468999999987 999999999764 467887753 2344555554443 359999999875
Q ss_pred ---C---CCCcceecCCC-CCCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC--CC-CCcccEEEE---
Q 013804 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQT--- 270 (436)
Q Consensus 210 ---~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~--- 270 (436)
. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....+... .+ ......+..
T Consensus 136 ~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~ 215 (283)
T 1yc0_A 136 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 215 (283)
T ss_dssp TBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCC
Confidence 1 24667777543 3456799999999975321 2233333332222222110 00 011233333
Q ss_pred --ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+.. +| .++||+|++.. |+.....+.+..+....+|+++.++.
T Consensus 216 ~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~~ 275 (283)
T 1yc0_A 216 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIRP 275 (283)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHCC-
T ss_pred CCCCccCCCCCCCceEEEECCcEEEEEEEEECCC-CCCCCCCeEEEEhhhHHHHHHHHhcC
Confidence 2357899999999854 45 59999999754 44334456677788888888876653
No 96
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.45 E-value=1.5e-12 Score=123.66 Aligned_cols=174 Identities=19% Similarity=0.204 Sum_probs=109.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCC---CCeEEEEecC---------CcEEeeEEEEEcCCC-------CeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQDK-------DVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~d---------g~~~~a~vv~~d~~~-------DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.+ ...+.|+++. .+.+.++-+..|+.+ ||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (261)
T 3gyl_B 23 VHVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPIT 101 (261)
T ss_dssp EEEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCC
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCcc
Confidence 468999999987 99999999963 3457777753 224556666667654 99999998754
Q ss_pred --CCCcceecCCC-CCCCCCCEEEEEecCCCCC-------CceeEeEEeeeeeeeccC--C-------CCCCcccEEEE-
Q 013804 211 --DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISSA--A-------TGRPIQDVIQT- 270 (436)
Q Consensus 211 --~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-------~~~~~G~vs~~~~~~~~~--~-------~~~~~~~~i~~- 270 (436)
..+.|+.|... ..+..|+.+++.||..... .......+.-+....+.. . ........+..
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~ 181 (261)
T 3gyl_B 102 FSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAG 181 (261)
T ss_dssp CBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEES
T ss_pred CCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeC
Confidence 24667777533 3356799999999974321 122222332222111100 0 00111223333
Q ss_pred ----ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 ----DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 ----~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+.. +| .++||+|++.. ++.....+.+..+...++|+++.++.
T Consensus 182 ~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~~ 243 (261)
T 3gyl_B 182 YVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDA-CGARNRPGVYTLASSYASWIQSKVTE 243 (261)
T ss_dssp CSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCC-SSCTTCCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCC-CCCCCCCCEEEEHHHhHHHHHHHHhh
Confidence 2467899999999853 45 59999998743 43334456677888888888876643
No 97
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.44 E-value=1.6e-12 Score=122.04 Aligned_cols=172 Identities=18% Similarity=0.212 Sum_probs=107.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|.++. .+.+.++-+..|+. +||||||++.+.
T Consensus 26 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 104 (238)
T 3bg8_A 26 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 104 (238)
T ss_dssp EEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCC
T ss_pred cEEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCccc
Confidence 468999999987 999999999764 457777632 34566666666654 599999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccC
Q 013804 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAIN 275 (436)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~ 275 (436)
..+.|+.|.... ....++.+++.||..... .......+.-+....+. +.........+.. ....|
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C 184 (238)
T 3bg8_A 105 YTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 184 (238)
T ss_dssp CBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCC
T ss_pred cCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcC
Confidence 246677775432 256789999999975432 12222222211111110 0000011223333 24678
Q ss_pred CCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
.|+|||||+.. +| .++||+|++.. ++.....+.+.-+....+|+++.+
T Consensus 185 ~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 185 KGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCcceEEEECCeEEEEEEEEECCC-CCCCCCCcEEEeHHHHHHHHHHHH
Confidence 99999999853 44 49999998753 433334566677778888887654
No 98
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.44 E-value=1.1e-11 Score=117.18 Aligned_cols=172 Identities=14% Similarity=0.184 Sum_probs=108.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCC--
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAP-- 209 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~-- 209 (436)
...|+|.||+++ +|||+|||+.+. ..+.|+++. .+.+.++-+..|+. +||||||++.+
T Consensus 29 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~ 107 (252)
T 1rtf_B 29 RFLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSS 107 (252)
T ss_dssp EEEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSS
T ss_pred CEEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCccc
Confidence 468999999987 999999999753 457777743 23456666666654 59999999876
Q ss_pred --C---CCCcceecCCCC-CCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCCC---CCCcccEEEEc---
Q 013804 210 --K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT---GRPIQDVIQTD--- 271 (436)
Q Consensus 210 --~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~~---~~~~~~~i~~~--- 271 (436)
. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+...
T Consensus 108 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 187 (252)
T 1rtf_B 108 RCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTR 187 (252)
T ss_dssp CCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC
T ss_pred cccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCC
Confidence 2 245677775433 355789999999975432 12333333322222111100 00112233321
Q ss_pred --------cccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 272 --------AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 272 --------~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
...|.|+|||||+-. +| .++||+|++.. |+.....+.+.-+...++|+++.+
T Consensus 188 ~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 250 (252)
T 1rtf_B 188 SGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG-CGQKDVPGVYTKVTNYLDWIRDNM 250 (252)
T ss_dssp ------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC-CCCCCCCeEEEEHHHHHHHHHHhc
Confidence 467899999999843 45 69999998754 333334566677788888887754
No 99
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.44 E-value=2.5e-12 Score=120.25 Aligned_cols=172 Identities=16% Similarity=0.187 Sum_probs=107.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC----CeEEEEecC----------CcEEeeEEEEEcCC-------CCeEEEEEcCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAP 209 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~ 209 (436)
...|+|.+|+++ +|||+|||+.+. ..+.|.++. ...+.++-+..|+. +|||||+++.+
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~ 101 (235)
T 4dgj_A 23 RLLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFK 101 (235)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSC
T ss_pred CeEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCc
Confidence 468999999987 999999999543 356666642 12344555666665 59999999875
Q ss_pred C---CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCCCCCcccEEEE-----ccc
Q 013804 210 K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAA 273 (436)
Q Consensus 210 ~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~-----~~~ 273 (436)
. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+. +.........+.. ...
T Consensus 102 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~ 181 (235)
T 4dgj_A 102 VNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGID 181 (235)
T ss_dssp CCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCB
T ss_pred cccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCc
Confidence 4 346677776443 356799999999974321 12223333222211111 0000111233333 235
Q ss_pred cCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 274 INPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 274 i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
.|.|+|||||+.. +| .++||+|++.. ++.....+.+..+...++|+++.+
T Consensus 182 ~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~i 234 (235)
T 4dgj_A 182 SCQGDSGGPLMCQENNRWFLAGVTSFGYE-CALPNRPGVYARVSRFTEWIQSFL 234 (235)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGTHHHHHTTC
T ss_pred cCCCCCCCeEEEEECCcEEEEEEEEEcCC-CCCCCCCEEEeeHHHHHHHHHHHh
Confidence 7899999999953 34 39999999754 333334566777788888888765
No 100
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.43 E-value=2e-12 Score=122.04 Aligned_cols=172 Identities=18% Similarity=0.184 Sum_probs=106.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+. ...|+++. .+.+.++-+..|+. +||||||++.+. .
T Consensus 39 ~~~CgGtLI~~~-~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 116 (245)
T 1t8o_A 39 FHFCGGSLINEN-WVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 116 (245)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCC
Confidence 468999999987 999999999763 34555532 23455665566653 599999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC-CCCCcccEEEE---ccccCCCCCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT---DAAINPGNSG 280 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~-~~~~~~~~i~~---~~~i~~G~SG 280 (436)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+.. ....|.|+||
T Consensus 117 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSG 196 (245)
T 1t8o_A 117 TVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSG 196 (245)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTT
T ss_pred ceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCc
Confidence 46677775433 356899999999975422 1222222222211111000 00001122222 3467899999
Q ss_pred CeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 281 GPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 281 GPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||+.. +| .++||+|++.. +......+....+...++|+++.++
T Consensus 197 gPL~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 197 GPLVCKKNGAWTLVGIVSWGSS-TCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp CEEEEEETTEEEEEEEEEECCT-TCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred CCEEEEECCEEEEEEEEEeCCC-CCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 999853 34 79999998764 3323345666778888888877554
No 101
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.43 E-value=1.3e-12 Score=122.23 Aligned_cols=173 Identities=19% Similarity=0.189 Sum_probs=107.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC---------CCeEEEEEcCCC--
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAPK-- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~~-- 210 (436)
...|+|.+|+++ +|||+|||+.+...+.|+++. .+.+.+.-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~ 101 (235)
T 2wph_S 23 DAFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVL 101 (235)
T ss_dssp TTCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCC
T ss_pred CeeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcC
Confidence 457999999987 999999999887778887753 23345555555543 499999998764
Q ss_pred -CCCcceecCCCCC---CCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCCC-CCCcccEEEE-----ccccC
Q 013804 211 -DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQT-----DAAIN 275 (436)
Q Consensus 211 -~~~~~~~l~~~~~---~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~~-~~~~~~~i~~-----~~~i~ 275 (436)
..+.|+.|..... +..+..+++.||..... .......+.-+....+.... .......+.. ....|
T Consensus 102 ~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C 181 (235)
T 2wph_S 102 NSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSC 181 (235)
T ss_dssp BTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCC
T ss_pred CCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccC
Confidence 2456666643221 23578999999874322 12222223222221111000 0111233333 23578
Q ss_pred CCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
.|+|||||+.. +| .++||+|++.. |+.....+.+..+...++|+++.++
T Consensus 182 ~GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (235)
T 2wph_S 182 QGDSGGPHVTEVEGTSFLTGIISWGEE-CAMKGKYGIYTKVSRYVNWIKEKTK 233 (235)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCCCCCceEEeECCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99999999853 45 59999998754 4433445667778888888887653
No 102
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.43 E-value=9.3e-13 Score=122.49 Aligned_cols=170 Identities=15% Similarity=0.211 Sum_probs=106.2
Q ss_pred EEEEEEEcCCCEEEecccccCCC--CeEEEEecCC--------cEEeeEEEEEc------CCCCeEEEEEcCCCC----C
Q 013804 153 SGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ--------SAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (436)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg--------~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (436)
.|+|++|+++ +|||+|||+.+. ..+.|.+... ..+..+.+..+ ..+||||||++.+.. .
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~ 105 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLK 105 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccccccc
Confidence 8999999987 999999999643 4566666432 22333333333 236999999987642 4
Q ss_pred CcceecCCCC-CCCCCCEEEEEecCCCCCC-----ceeEeEEeeeeeeecc--CCCCCCcccEEEE---ccccCCCCCCC
Q 013804 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISS--AATGRPIQDVIQT---DAAINPGNSGG 281 (436)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~vs~~~~~~~~--~~~~~~~~~~i~~---~~~i~~G~SGG 281 (436)
+.|+.|.... .+..|+.+++.||...... ......+.-+....+. +.........+.. +...|.|+|||
T Consensus 106 v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGg 185 (228)
T 3h7o_A 106 SKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGD 185 (228)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTC
T ss_pred cccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCC
Confidence 5677776443 2678999999999754322 2233333322221111 0000011122222 25678999999
Q ss_pred eEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 282 Plvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
||+. +++++||++++.. ++. ...+....+...++|+++.+++
T Consensus 186 Pl~~-~~~l~Gi~S~g~~-c~~-~~p~vyt~v~~~~~WI~~~i~~ 227 (228)
T 3h7o_A 186 PTVQ-QDTLVGVAAYFPK-RPE-GAPEVFTKVGSYVSWIQDIIKK 227 (228)
T ss_dssp EEEE-TTEEEEEECCCTT-CCT-TCCEEEEEGGGTHHHHHHHHTT
T ss_pred ccee-cCeEEEEEeecCc-CCC-CCCcEEEEHHHHHHHHHHHhhc
Confidence 9995 7889999998754 332 3456677788888888876653
No 103
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.43 E-value=8.6e-13 Score=125.07 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=109.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC---eEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
...|+|.||+++ ||||+|||+.+.. .+.|+++. .+.+.++-+..|+. +||||||++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (254)
T 2bz6_H 23 AQLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVV 101 (254)
T ss_dssp EEEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCC
T ss_pred CcEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCccc
Confidence 468999999987 9999999998754 37787753 23455655555554 599999998764
Q ss_pred --CCCcceecCCCC----CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCC----CCCcccEEEE---
Q 013804 211 --DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT----GRPIQDVIQT--- 270 (436)
Q Consensus 211 --~~~~~~~l~~~~----~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~----~~~~~~~i~~--- 270 (436)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+. +.. .......+..
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 181 (254)
T 2bz6_H 102 LTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYS 181 (254)
T ss_dssp CBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCS
T ss_pred cCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCC
Confidence 245677675322 235689999999874322 12222233222211110 000 0111233333
Q ss_pred --ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 --DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+.. +| .++||+|++.. |+.....+.+..+...++|+++.++.
T Consensus 182 ~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 241 (254)
T 2bz6_H 182 DGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQG-CATVGHFGVYTRVSQYIEWLQKLMRS 241 (254)
T ss_dssp SSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred CCCCccccccCCCceEEeECCEEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 2357899999999853 45 59999998754 43333456667788888888887654
No 104
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.42 E-value=5e-13 Score=125.65 Aligned_cols=173 Identities=17% Similarity=0.176 Sum_probs=107.2
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC-----------cEEeeEEEEEcC-------C--CCeEEEEEcCCC-
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-----------SAYDAKIVGFDQ-------D--KDVAVLRIDAPK- 210 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-----------~~~~a~vv~~d~-------~--~DlAlLkv~~~~- 210 (436)
..|+|.||+++ +|||+|||+.+...+.|+++.. ..+.++-+..|+ . +||||||++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 26 HTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 68999999987 9999999998877777776421 111222233443 2 799999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC--CC-CCcccEEEEc---cccCC
Q 013804 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINP 276 (436)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~--~~-~~~~~~i~~~---~~i~~ 276 (436)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... .+ ......+... ...|.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 346677776443 356799999999975432 1222222222222111110 00 0112233322 45789
Q ss_pred CCCCCeEECC--CC--cEEEEEeeee-cCCCCCCcceeeeeeeccchhhhhccc
Q 013804 277 GNSGGPLLDS--SG--SLIGINTAIY-SPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 277 G~SGGPlvd~--~G--~VVGI~s~~~-~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|+|||||+-. +| .++||++++. ..|+.....+.+..+....+|+++.++
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 9999999842 56 7999999875 234433345666778888888877654
No 105
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.42 E-value=1.2e-11 Score=116.70 Aligned_cols=173 Identities=16% Similarity=0.240 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------cEEeeEEEEEcC-CCCeEEEEEcCCC---CCCc
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (436)
...|+|.||+++ ||||+|||+.+. ..+.|+++.. +.+...-+..++ .+||||||++.+. ..+.
T Consensus 41 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~ 119 (247)
T 1ddj_A 41 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 119 (247)
T ss_dssp CEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEE
Confidence 468999999987 999999999764 3567776432 234444444554 5799999998763 2456
Q ss_pred ceecCCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCC---CCCCcccEEEE-----ccccCCCCCCC
Q 013804 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA---TGRPIQDVIQT-----DAAINPGNSGG 281 (436)
Q Consensus 215 ~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~---~~~~~~~~i~~-----~~~i~~G~SGG 281 (436)
|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+.. ....|.|+|||
T Consensus 120 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 199 (247)
T 1ddj_A 120 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGG 199 (247)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcC
Confidence 77775432 356789999999975432 1233333322222211110 01111233333 23578999999
Q ss_pred eEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 282 PLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 282 Plvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
||+-. +| .++||+|++.. ++.....+....+....+|+++.++
T Consensus 200 PL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 200 PLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEEECSSSEEEEEEECGGGC-CBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred cEEEEECCcEEEEEEEEECCC-CCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 99843 33 59999998753 3322345666777888888887654
No 106
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.42 E-value=2e-13 Score=112.16 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=86.7
Q ss_pred eccchhhhhccccceecceecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEe
Q 013804 314 DTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (436)
Q Consensus 314 ~~i~~~l~~l~~~g~v~~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V 393 (436)
+.++++.++++++++..++++|+...... ..+.|+.|....+.+||+++||++ ||+|++|||++|
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~----~~~~G~~V~~~~pas~A~~aGl~~-----------GDvI~~ing~~v 69 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEIFQYVRLSQVKRD----DKVLGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDL 69 (105)
T ss_dssp HHHHHHHHHHHHSGGGHHHHEEEEEEEET----TEEEEEEEEECSCTHHHHHHTCCT-----------TCEEEEETTEET
T ss_pred HHHHHHHHHHHHCHHHHHhhceeEEEecC----CcEEEEEEecCCCCCHHHHcCCCC-----------CCEEEEECCEEC
Confidence 46778889999999999999998864321 123688888888888999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 394 SNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 394 ~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.++.|+..++....+|++++++|.|+|+.+++++++
T Consensus 70 ~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 70 TDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 999999999887678999999999999998887764
No 107
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.40 E-value=5.2e-12 Score=122.21 Aligned_cols=173 Identities=17% Similarity=0.214 Sum_probs=106.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCC--------CCeEEEEecCC----------cEEeeEEEEEcC--------CCCeEEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG--------ASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVL 204 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--------~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlL 204 (436)
...|.|.||+++ ||||||||+.. ...+.|+++.. +.+.++-+..|+ .+|||||
T Consensus 55 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl 133 (289)
T 2bdy_A 55 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 133 (289)
T ss_dssp EEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEE
T ss_pred CEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEE
Confidence 468999999987 99999999942 34577777532 223455555554 2599999
Q ss_pred EEcCCC---CCCcceecCCCCC----CCCCCEEEEEecCCCCC-----------CceeEeEEeeeeeeeccCCC-CCCcc
Q 013804 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAAT-GRPIQ 265 (436)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~-----------~~~~~G~vs~~~~~~~~~~~-~~~~~ 265 (436)
|++.+. ..+.|+.|..... +..|..+++.||..... .......+.-+....+.... .....
T Consensus 134 ~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~ 213 (289)
T 2bdy_A 134 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 213 (289)
T ss_dssp EESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCC
Confidence 998764 2466777754321 45799999999875321 11222222222211111000 01112
Q ss_pred cEEEE--------ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 266 DVIQT--------DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 266 ~~i~~--------~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
..+.. ....|.|+|||||+-. +| .++||+|++.. |+.....+...-+...++|+++.++
T Consensus 214 ~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 214 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 285 (289)
T ss_dssp TEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 33433 2367999999999842 34 59999999753 4433345666778888888877654
No 108
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.40 E-value=6.4e-12 Score=126.10 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=109.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecC-------CcEEeeEEEEEcCCC-------------CeEEEEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-------QSAYDAKIVGFDQDK-------------DVAVLRI 206 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d-------g~~~~a~vv~~d~~~-------------DlAlLkv 206 (436)
...|.|.||+++ ||||||||+.. ...+.|+++. +..+.++-+..|+.+ ||||||+
T Consensus 140 ~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL 218 (372)
T 1z8g_A 140 AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218 (372)
T ss_dssp EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEE
T ss_pred ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEE
Confidence 568999999987 99999999942 2457777643 234566656655544 9999999
Q ss_pred cCCC---CCCcceecCCC-CCCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeeccCC---CCCCcccEEEE----
Q 013804 207 DAPK---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA---TGRPIQDVIQT---- 270 (436)
Q Consensus 207 ~~~~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~~~---~~~~~~~~i~~---- 270 (436)
+.+. ..+.|+.|... ..+..|+.+++.||..... .......+.-+........ ........+-.
T Consensus 219 ~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~ 298 (372)
T 1z8g_A 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPE 298 (372)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTT
T ss_pred CCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCC
Confidence 8763 34677777643 3356799999999975432 1233333332222222110 01111233433
Q ss_pred -ccccCCCCCCCeEECCC-----C--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 -DAAINPGNSGGPLLDSS-----G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 -~~~i~~G~SGGPlvd~~-----G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+-.+ | .++||+|++.. ++.....+...-+....+|+++.++
T Consensus 299 ~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 360 (372)
T 1z8g_A 299 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG-CALAQKPGVYTKVSDFREWIFQAIK 360 (372)
T ss_dssp CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 23578999999998432 3 59999999854 4333345666778888888887664
No 109
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.39 E-value=2.4e-11 Score=117.69 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=108.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC--------------CcEEeeEEEEEcCC-------CCeEEEEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD--------------QSAYDAKIVGFDQD-------KDVAVLRI 206 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d--------------g~~~~a~vv~~d~~-------~DlAlLkv 206 (436)
...|.|.||+++ ||||+|||+.+. ..+.|+++. .+.+.++-+..|+. +||||||+
T Consensus 29 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L 107 (290)
T 1fiw_A 29 YHVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKI 107 (290)
T ss_dssp EEEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEE
T ss_pred ceEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEE
Confidence 357999999987 999999999754 356776642 12345555566654 59999999
Q ss_pred cCCC---CCCcceecCCCC--CCCCCCEEEEEecCCCCC------CceeEeEEeeeeeeeccCC---CCCCcccEEEE--
Q 013804 207 DAPK---DKLRPIPIGVSA--DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA---TGRPIQDVIQT-- 270 (436)
Q Consensus 207 ~~~~---~~~~~~~l~~~~--~~~~G~~V~~vG~p~g~~------~~~~~G~vs~~~~~~~~~~---~~~~~~~~i~~-- 270 (436)
+.+. ..+.|+.|.... ....|+.+++.||..... .......+.-+....+... ........+..
T Consensus 108 ~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~ 187 (290)
T 1fiw_A 108 TPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGY 187 (290)
T ss_dssp ESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEEC
T ss_pred CCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEec
Confidence 8764 246677775432 235689999999975322 1233333333322222110 01111233333
Q ss_pred ---ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 ---DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 ---~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+-. +| .++||+|++.. |+.....+...-+...++|+++.+..
T Consensus 188 ~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 250 (290)
T 1fiw_A 188 PEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG-CARAKRPGVYTSTWSYLNWIASKIGS 250 (290)
T ss_dssp TTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS-SSBTTBCEEEEESGGGHHHHHHHHCH
T ss_pred CCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHhCc
Confidence 2367999999999843 23 59999999754 43333445667777888888876654
No 110
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.38 E-value=5.8e-12 Score=118.30 Aligned_cols=171 Identities=18% Similarity=0.203 Sum_probs=105.7
Q ss_pred eEEEEEEEcCCCEEEecccccCC-------CCeEEEEecCC--------cEEeeEEEEEcCC----------CCeEEEEE
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQD----------KDVAVLRI 206 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~~----------~DlAlLkv 206 (436)
..|+|.+|+++ +|||+|||+.+ ...+.|+++.. ..+.++-+..|+. +||||||+
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 47999999987 99999999963 23466776542 2345555555543 39999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccC-----C-CCCCcccEEEE---
Q 013804 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-----A-TGRPIQDVIQT--- 270 (436)
Q Consensus 207 ~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~-----~-~~~~~~~~i~~--- 270 (436)
+.+. ..+.|+.|..... +..|..+++.||..... .......+.-+....+.. . ........+..
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 180 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 180 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCC
Confidence 8764 2467777764432 46799999999975432 222333332222111100 0 00011233333
Q ss_pred --ccccCCCCCCCeEECCC---C--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 --DAAINPGNSGGPLLDSS---G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~~---G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+..+ | .++||+|++.. |+. +.+.+..+....+|+++.++.
T Consensus 181 ~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~--~~~vyt~V~~y~~WI~~~~~~ 240 (242)
T 2qy0_B 181 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEMEE 240 (242)
T ss_dssp TCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSS--SCEEEEEGGGGHHHHHHHTTC
T ss_pred CCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHhhc
Confidence 34678999999998532 2 49999999754 332 346677788888888876653
No 111
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.38 E-value=1.5e-12 Score=129.53 Aligned_cols=175 Identities=13% Similarity=0.137 Sum_probs=111.7
Q ss_pred CcCeEEEEEEEcCCCEEEecccccCCCC-----------eEEEEecCCcEEeeEEEEEcCC---CCeEEEEEcCCC---C
Q 013804 149 VPQGSGSGFVWDSKGHVVTNYHVIRGAS-----------DIRVTFADQSAYDAKIVGFDQD---KDVAVLRIDAPK---D 211 (436)
Q Consensus 149 ~~~~~GSGfiI~~~G~ILT~aHvv~~~~-----------~i~V~~~dg~~~~a~vv~~d~~---~DlAlLkv~~~~---~ 211 (436)
.....|.|.||+++ ||||||||+.... ...+.....+.+.++-+..|++ +||||||++.+. .
T Consensus 123 ~~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~ 201 (347)
T 4f4o_C 123 HHNLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNE 201 (347)
T ss_dssp TTCCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSS
T ss_pred CCCEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCC
Confidence 34578999999987 9999999996432 2344555566777777777875 499999998763 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEecCCCCCC----ceeEeEEeeeeeeecc--CC----------------CCCCcccEEE
Q 013804 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISS--AA----------------TGRPIQDVIQ 269 (436)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~vs~~~~~~~~--~~----------------~~~~~~~~i~ 269 (436)
.+.|+.|........|..+++.||...... ......+.-+...... +. ........+-
T Consensus 202 ~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iC 281 (347)
T 4f4o_C 202 RVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFC 281 (347)
T ss_dssp SCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEE
T ss_pred ceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEE
Confidence 567888876666788999999998754321 2223333222211110 00 0000112232
Q ss_pred E-----ccccCCCCCCCeEEC---CCCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 270 T-----DAAINPGNSGGPLLD---SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 270 ~-----~~~i~~G~SGGPlvd---~~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
. ....|.|+|||||+- .+|+ ++||+|++.. ++. ...+.+.-+....+|+++.+++
T Consensus 282 AG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~-C~~-~~pgVYTrVs~y~~WI~~~i~~ 346 (347)
T 4f4o_C 282 AGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKS-CRT-AEYGVYVRVTSILDWIQTTIAD 346 (347)
T ss_dssp ECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCC-TTT-SSCEEEEEHHHHHHHHHHHHTC
T ss_pred ecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCC-CCC-CCCeEEEEHHHHHHHHHHHHHc
Confidence 2 235689999999972 2443 9999999754 432 2345666777888888876653
No 112
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.38 E-value=8.2e-12 Score=117.67 Aligned_cols=173 Identities=15% Similarity=0.186 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecC------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK--- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~--- 210 (436)
...|+|.||+++ +|||+|||+.. ...+.|.+.+ ++.+.++-+..|++ +||||||++.+.
T Consensus 26 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~ 104 (245)
T 2f9n_A 26 MHFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNIS 104 (245)
T ss_dssp EEEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCC
T ss_pred ceEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCC
Confidence 357999999987 99999999953 2457777653 23456666666654 499999998764
Q ss_pred CCCcceecCCC-CCCCCCCEEEEEecCCCCCC-------ceeEeEEeeeeeeecc--CCC--------CCCcccEEEE--
Q 013804 211 DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH-------TLTTGVISGLRREISS--AAT--------GRPIQDVIQT-- 270 (436)
Q Consensus 211 ~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~-------~~~~G~vs~~~~~~~~--~~~--------~~~~~~~i~~-- 270 (436)
..+.|+.|... ..+..|+.+++.||...... ......+.-+....+. +.. .......+..
T Consensus 105 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~ 184 (245)
T 2f9n_A 105 SRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGN 184 (245)
T ss_dssp SSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECC
T ss_pred CCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecC
Confidence 24667777543 34567999999999753221 1222222211111110 000 0011122332
Q ss_pred -ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 -DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 -~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+.. +| .++||+|++.. ++.....+...-+...++|+++.++
T Consensus 185 ~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 242 (245)
T 2f9n_A 185 SQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEG-CAQPNRPGIYTRVTYYLDWIHHYVP 242 (245)
T ss_dssp SSSBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred CCCCcCCCCCCCceEEEECCEEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 3457899999999853 56 59999998753 3323345666778888888887654
No 113
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.37 E-value=7.4e-12 Score=118.45 Aligned_cols=173 Identities=16% Similarity=0.217 Sum_probs=104.8
Q ss_pred CeEEEEEEEcCCCEEEecccccC--------CCCeEEEEecCC----------cEEeeEEEEEcCC--------CCeEEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SAYDAKIVGFDQD--------KDVAVL 204 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg----------~~~~a~vv~~d~~--------~DlAlL 204 (436)
...|+|.||+++ +|||+|||+. ....+.|+++.. +...++-+..|+. +|||||
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl 103 (259)
T 3rm2_H 25 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 103 (259)
T ss_dssp EEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEE
T ss_pred ceEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEE
Confidence 357999999987 9999999994 234567776532 1223455555543 499999
Q ss_pred EEcCCC---CCCcceecCCCCC----CCCCCEEEEEecCCCCC-----------CceeEeEEeeeeeeeccCCCC-CCcc
Q 013804 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAATG-RPIQ 265 (436)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~-----------~~~~~G~vs~~~~~~~~~~~~-~~~~ 265 (436)
|++.+. ..+.|+.|..... +..|..+.+.||..... .......+.-+....+..... ....
T Consensus 104 ~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~ 183 (259)
T 3rm2_H 104 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 183 (259)
T ss_dssp EESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCC
Confidence 998764 2456676753221 35699999999975322 112222222222111111000 1112
Q ss_pred cEEEEc--------cccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 266 DVIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 266 ~~i~~~--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
..+... ...|.|+|||||+-. +| .++||+|++.. |+.....+.+.-+...++|+++.++
T Consensus 184 ~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 184 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp TEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred ceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHH
Confidence 333332 268999999999843 33 69999999744 4433345667777888888877654
No 114
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.37 E-value=2.7e-12 Score=104.36 Aligned_cols=72 Identities=29% Similarity=0.508 Sum_probs=67.8
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|..|.++|||++ ||++ ||+|++|||++|.+++|+..++....+|++++++|.|+|+.+++++++
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 74 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHA-----------GDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKL 74 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCT-----------TCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEEeCCCCchHH-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 7999999999999995 9999 999999999999999999999998778999999999999999999999
Q ss_pred ecCC
Q 013804 430 EPKP 433 (436)
Q Consensus 430 ~~~~ 433 (436)
.+.+
T Consensus 75 ~~~~ 78 (100)
T 3i18_A 75 TAID 78 (100)
T ss_dssp EECS
T ss_pred ecCC
Confidence 8765
No 115
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=126.24 Aligned_cols=173 Identities=14% Similarity=0.065 Sum_probs=108.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---CCCc
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLR 214 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~ 214 (436)
...|+|.||+++ ||||+|||+.+...+.|+++. .+.+.++-+..|+. +||||||++.+. ..+.
T Consensus 76 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~ 154 (283)
T 3f1s_B 76 KDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGL 154 (283)
T ss_dssp CEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCC
T ss_pred CeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEE
Confidence 568999999987 999999999888888888863 34566666666654 499999998764 3466
Q ss_pred ceecCCCC----CCCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccCC-CCCCcccEEEE--ccccCCCCCCCeEE
Q 013804 215 PIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA-TGRPIQDVIQT--DAAINPGNSGGPLL 284 (436)
Q Consensus 215 ~~~l~~~~----~~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~~-~~~~~~~~i~~--~~~i~~G~SGGPlv 284 (436)
|+.|.... .+..|+.+++.||..... .......+.-+........ ........+-. ....+.|+|||||+
T Consensus 155 picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDSGgPlv 234 (283)
T 3f1s_B 155 PVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVT 234 (283)
T ss_dssp CCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEEEECSSCGGGBCTTCEEE
T ss_pred eEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEcccCCCCCCCCCCCCcEE
Confidence 77775432 356799999999875211 1122222222211111000 00001122222 22344689999998
Q ss_pred CC-CCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 285 DS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 285 d~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
-. +|+ ++||+|++. +......+...-+....+|+++.++.
T Consensus 235 ~~~~~~~~l~GIvS~g~--c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 235 REHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp EECSSCEEEEEEECCCS--GGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred EEECCEEEEEEEEEeCC--CCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 53 565 999999753 22233455667788888888876654
No 116
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.35 E-value=1.9e-12 Score=111.81 Aligned_cols=99 Identities=23% Similarity=0.320 Sum_probs=76.5
Q ss_pred hccccceecceecceeeecch----hhhhcC----ccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEe
Q 013804 322 QLVKFGKVTRPILGIKFAPDQ----SVEQLG----VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (436)
Q Consensus 322 ~l~~~g~v~~~~lGv~~~~~~----~~~~~g----~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V 393 (436)
++++.+++.+++||+.+.... ..+.++ ..|++|..|.+++||+++||++ ||+|++|||++|
T Consensus 28 ~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v 96 (139)
T 2vz5_A 28 EIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDM 96 (139)
T ss_dssp EEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC
T ss_pred EEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEEc
Confidence 456678888899999985311 112333 2799999999999999999999 999999999999
Q ss_pred C--CHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 013804 394 S--NGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 432 (436)
Q Consensus 394 ~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 432 (436)
. ++.++..++.. .+|++++|+|.|+|+..++++++...
T Consensus 97 ~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~~ 136 (139)
T 2vz5_A 97 TMVTHDQARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLSE 136 (139)
T ss_dssp TTCCHHHHHHHHCC-TTCSEEEEEEEECC-------CCCCC
T ss_pred CCCCHHHHHHHHHh-CCCCEEEEEEEECCEEEEEEEeecee
Confidence 9 58999999987 78999999999999998888877653
No 117
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.34 E-value=5.7e-13 Score=106.52 Aligned_cols=72 Identities=25% Similarity=0.438 Sum_probs=67.1
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|..|.++|||++ ||++ ||+|++|||++|.++.++..++....+|++++|+|.|+|+.+++++++
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 68 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEV-----------GDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTL 68 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCS-----------SCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEEC
T ss_pred CceEEEEECCCChHHH-cCCC-----------CCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4788999999999999 9999 999999999999999999999998778999999999999999999999
Q ss_pred ecCC
Q 013804 430 EPKP 433 (436)
Q Consensus 430 ~~~~ 433 (436)
.+.+
T Consensus 69 ~~~~ 72 (91)
T 2kjp_A 69 KQFP 72 (91)
T ss_dssp CCCT
T ss_pred eccC
Confidence 8665
No 118
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.32 E-value=3.7e-11 Score=121.63 Aligned_cols=173 Identities=16% Similarity=0.172 Sum_probs=108.2
Q ss_pred eEEEEEEEcCCCEEEecccccCC----CCeEEEEecCC-------cEEeeEEEEEcC--------CCCeEEEEEcCCC--
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK-- 210 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~-- 210 (436)
..|.|.||+++ ||||||||+.+ ...+.|+++.. +.+.++-+..|+ .+||||||++.+.
T Consensus 183 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~ 261 (403)
T 1zjk_A 183 TTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 261 (403)
T ss_dssp CCEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCC
T ss_pred CceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcC
Confidence 46999999987 99999999965 45677877532 345555555554 3599999998764
Q ss_pred -CCCcceecCCCCC---CCCCCEEEEEecCCCCC----CceeEeEEeeeeeeecc--CCC-----CCCcccEEEE-----
Q 013804 211 -DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT-----GRPIQDVIQT----- 270 (436)
Q Consensus 211 -~~~~~~~l~~~~~---~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~--~~~-----~~~~~~~i~~----- 270 (436)
..+.|+.|..... +..|+.+++.||..... .......+.-+...... +.. .......+-.
T Consensus 262 ~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~ 341 (403)
T 1zjk_A 262 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESG 341 (403)
T ss_dssp BTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSC
T ss_pred CCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCC
Confidence 3567777754332 56799999999975432 22333333222221110 000 0111233333
Q ss_pred ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 ~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+-. +| .++||+|++...++.....+...-+....+|+++.++
T Consensus 342 ~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 401 (403)
T 1zjk_A 342 GKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 401 (403)
T ss_dssp CTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred CCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2467899999999842 34 4999999984445433345667778888888877654
No 119
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.32 E-value=9e-11 Score=112.24 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=111.5
Q ss_pred CCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEE
Q 013804 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIV 193 (436)
Q Consensus 126 ~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv 193 (436)
-|-.|.|........ ....|.|.||+++ ||||||||+.+. ..+.|.... +..+..+.+
T Consensus 35 ~Pw~v~l~~~~~~~~---------~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 35 QPWFAAIYRRHRGGS---------VTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp STTEEEEEEECSSSC---------EEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCcEEEEEEecCCCc---------ceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 466777754321111 1357999999987 999999999754 345555532 234666666
Q ss_pred EEcCC---------CCeEEEEEcCCC-------CCCcceecCCC-CCCCCCCEEEEEecCCCCCC------ceeEeEEee
Q 013804 194 GFDQD---------KDVAVLRIDAPK-------DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH------TLTTGVISG 250 (436)
Q Consensus 194 ~~d~~---------~DlAlLkv~~~~-------~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~------~~~~G~vs~ 250 (436)
..|+. .|||||+++.+. ..+.++.|... ..+..|..+.+.||...... ......+.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 66653 499999997532 23556666433 34667899999998765321 112222221
Q ss_pred eeeeeccCCC---CCCcccEEEE-----ccccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchh
Q 013804 251 LRREISSAAT---GRPIQDVIQT-----DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (436)
Q Consensus 251 ~~~~~~~~~~---~~~~~~~i~~-----~~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~ 319 (436)
+......... .......+.. ....|.|+|||||+-. +| .++||+|++.. ++.....+.+.-+...++|
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyt~V~~y~~W 263 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHH
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHH
Confidence 1111111100 0001112221 2357899999999842 33 39999999754 3323334556777788888
Q ss_pred hhhcccc
Q 013804 320 VDQLVKF 326 (436)
Q Consensus 320 l~~l~~~ 326 (436)
+++.++.
T Consensus 264 I~~~~~~ 270 (276)
T 2vnt_A 264 IRSHTKE 270 (276)
T ss_dssp HHHHHSC
T ss_pred HHHHhhh
Confidence 8876653
No 120
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.32 E-value=1.2e-11 Score=124.87 Aligned_cols=174 Identities=19% Similarity=0.211 Sum_probs=110.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC----CeEEEEecCC-----------cEEeeEEEEEcCC-------CCeEEEEEcC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFADQ-----------SAYDAKIVGFDQD-------KDVAVLRIDA 208 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~dg-----------~~~~a~vv~~d~~-------~DlAlLkv~~ 208 (436)
...|.|.||+++ ||||||||+.+. ..+.|+++.. +.+.++-+..|+. +||||||++.
T Consensus 161 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 468999999987 999999999753 4578887531 2355565666654 4999999987
Q ss_pred CC---CCCcceecCCCCCCCCCCEEEEEecCCCCC-------CceeEeEEeeeeeeeccC-----CCC---CCcccEEEE
Q 013804 209 PK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISSA-----ATG---RPIQDVIQT 270 (436)
Q Consensus 209 ~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-------~~~~~G~vs~~~~~~~~~-----~~~---~~~~~~i~~ 270 (436)
+. ..+.|+.|........++.+++.||..... .......+.-+....... ..+ ......+-.
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCA 319 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCA 319 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEE
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEe
Confidence 63 356778786554455678999999975321 122333333222211100 000 011223332
Q ss_pred ----ccccCCCCCCCeEECC----CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 271 ----DAAINPGNSGGPLLDS----SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 271 ----~~~i~~G~SGGPlvd~----~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
....|.|+|||||+-. +| .++||+|++.. ++.....+...-+...++|+++.++.
T Consensus 320 g~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYT~V~~y~~WI~~~i~~ 384 (394)
T 2b9l_A 320 GGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-CGDENVPGVYANVAHFRNWIDQEMQA 384 (394)
T ss_dssp CCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-CCBSSSCEEEEEGGGGHHHHHHHHHH
T ss_pred eCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHHh
Confidence 2467899999999842 23 59999999754 44333456667777888888876654
No 121
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.31 E-value=4e-12 Score=102.19 Aligned_cols=72 Identities=28% Similarity=0.525 Sum_probs=67.5
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|..|.++|||++ ||++ ||+|++|||++|.++.++..++....+|++++++|.|+|+.+++++++
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~-----------GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEA-----------GDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCT-----------TCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 6899999999999999 9999 999999999999999999999998778999999999999999999998
Q ss_pred ecCC
Q 013804 430 EPKP 433 (436)
Q Consensus 430 ~~~~ 433 (436)
.+.+
T Consensus 73 ~~~~ 76 (94)
T 2kl1_A 73 KPFP 76 (94)
T ss_dssp CBCS
T ss_pred eeCC
Confidence 7665
No 122
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.30 E-value=4.1e-12 Score=100.53 Aligned_cols=69 Identities=17% Similarity=0.247 Sum_probs=63.5
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|+.|..+.++|||+++||++ ||+|++|||++|.++.|+.+++....+|++++++|.|+|+.+++++++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCT-----------TCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 688999999999999999999 999999999999999999999987678999999999999988887764
No 123
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.30 E-value=2.5e-11 Score=118.96 Aligned_cols=171 Identities=15% Similarity=0.068 Sum_probs=106.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---CCCc
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DKLR 214 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~~~ 214 (436)
...++|.||+++ ||||+|||+.+...+.|+++. ++.+.++-+..|+. +||||||++.+. ..+.
T Consensus 117 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~ 195 (317)
T 3h5c_B 117 KDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGL 195 (317)
T ss_dssp CEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCC
T ss_pred ceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCcc
Confidence 568999999987 999999999887778888753 34566666666664 499999998764 2466
Q ss_pred ceecCCCC----CCCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccCC-CCCCcccEEEE--ccccCCCCCCCeEE
Q 013804 215 PIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA-TGRPIQDVIQT--DAAINPGNSGGPLL 284 (436)
Q Consensus 215 ~~~l~~~~----~~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~~-~~~~~~~~i~~--~~~i~~G~SGGPlv 284 (436)
|+.|.... .+..|+.+++.||..... .......+.-+........ ........+-. ....+.|+|||||+
T Consensus 196 picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~ 275 (317)
T 3h5c_B 196 PVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVT 275 (317)
T ss_dssp CCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECSCCCCCCCTTCEEE
T ss_pred ceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCCCCCcCCCCCCCEE
Confidence 77775432 356799999999975211 1122222222211110000 00001122222 23355789999998
Q ss_pred CC-CCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 285 DS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 285 d~-~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
-. +|+ |+||+|++. +......+.+..+....+|+++.+
T Consensus 276 ~~~~~~~~l~Gi~S~g~--~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 276 REHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp EEETTEEEEEEEECCCC--SSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred EecCCEEEEEEEEEECC--CCCCCcceEEEEhHHhHHHHHHHh
Confidence 53 455 999998753 222334556677778888887654
No 124
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.25 E-value=8.8e-11 Score=115.80 Aligned_cols=170 Identities=18% Similarity=0.214 Sum_probs=103.2
Q ss_pred eEEEEEEEcCCCEEEecccccCC-------CCeEEEEecCC--------cEEeeEEEEEcCC----------CCeEEEEE
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQD----------KDVAVLRI 206 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~~----------~DlAlLkv 206 (436)
+.|.|.||+++ ||||||||+.. ...+.|+++.. ..+.++-+..|+. +||||||+
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 47999999987 99999999973 23456766532 1234555555543 49999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccC-----C-CCCCcccEEEE---
Q 013804 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-----A-TGRPIQDVIQT--- 270 (436)
Q Consensus 207 ~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~-----~-~~~~~~~~i~~--- 270 (436)
+.+. ..+.|+.|..... ...|..+++.||..... .......+.-+....... . ........+-.
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~ 269 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 269 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecC
Confidence 8764 3466777764432 35789999999875432 122233332222111100 0 00011223333
Q ss_pred --ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 --~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+-. ++ .++||+|++.. ++. +.+...-+....+|+++.++
T Consensus 270 ~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~-C~~--~~gvyT~V~~y~~WI~~~i~ 328 (329)
T 1md8_A 270 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 328 (329)
T ss_dssp TCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS-SSS--SCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHHh
Confidence 3467899999999842 33 49999999754 332 34666777778888877543
No 125
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.24 E-value=2.5e-11 Score=123.89 Aligned_cols=196 Identities=15% Similarity=0.193 Sum_probs=114.6
Q ss_pred ceEEEEEeeeccCcccccccc--CcCeEEEEEEEcCCCEEEecccccC--------CCCeEEEEecCC----------cE
Q 013804 128 SVVNITNLAARQDAFTLDVLE--VPQGSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SA 187 (436)
Q Consensus 128 sVV~I~~~~~~~~~~~~~~~~--~~~~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg----------~~ 187 (436)
.||.-.......-||...... .....|.|.||+++ ||||||||+. ....+.|+++.. +.
T Consensus 165 RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~ 243 (424)
T 3nxp_A 165 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKI 243 (424)
T ss_dssp CCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEE
T ss_pred eeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeE
Confidence 455444433333344433321 12468999999987 9999999984 234677877531 22
Q ss_pred EeeEEEEEcCC--------CCeEEEEEcCCC---CCCcceecCCCCC----CCCCCEEEEEecCCC---------C--CC
Q 013804 188 YDAKIVGFDQD--------KDVAVLRIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFG---------L--DH 241 (436)
Q Consensus 188 ~~a~vv~~d~~--------~DlAlLkv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g---------~--~~ 241 (436)
+.++-+..|+. +||||||++.+. ..+.|+.|..... +..|..+++.||... . ..
T Consensus 244 ~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~ 323 (424)
T 3nxp_A 244 SMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS 323 (424)
T ss_dssp ECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCS
T ss_pred EEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCc
Confidence 34555555543 499999998753 3456777753321 346899999998731 1 12
Q ss_pred ceeEeEEeeeeeeeccCCC-CCCcccEEEEc--------cccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcc
Q 013804 242 TLTTGVISGLRREISSAAT-GRPIQDVIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGV 307 (436)
Q Consensus 242 ~~~~G~vs~~~~~~~~~~~-~~~~~~~i~~~--------~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~ 307 (436)
......+.-+......... .......+-.. ...|.|+|||||+-. +| .++||+|++.. ++.....
T Consensus 324 ~L~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~-C~~~~~p 402 (424)
T 3nxp_A 324 VLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKY 402 (424)
T ss_dssp BCEEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSC-TTTCCSC
T ss_pred cceEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCC-CCCCCCC
Confidence 2333333322221111100 11112333331 267899999999842 44 59999999854 4433345
Q ss_pred eeeeeeeccchhhhhccc
Q 013804 308 GFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 308 ~~aIP~~~i~~~l~~l~~ 325 (436)
+.+.-+....+|+++.++
T Consensus 403 gVyT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 403 GFYTHVFRLKKWIQKVID 420 (424)
T ss_dssp EEEEECTTCHHHHHHHHH
T ss_pred EEEEEHHHHHHHHHHHHH
Confidence 667778888888877654
No 126
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.24 E-value=5.4e-11 Score=110.43 Aligned_cols=138 Identities=18% Similarity=0.199 Sum_probs=82.2
Q ss_pred CeEEEEEEEc---CCCEEEecccccCCC------CeEEEEecC--C----cEEeeEEEEEc--------CCCCeEEEEEc
Q 013804 151 QGSGSGFVWD---SKGHVVTNYHVIRGA------SDIRVTFAD--Q----SAYDAKIVGFD--------QDKDVAVLRID 207 (436)
Q Consensus 151 ~~~GSGfiI~---~~G~ILT~aHvv~~~------~~i~V~~~d--g----~~~~a~vv~~d--------~~~DlAlLkv~ 207 (436)
...|+|.||+ ++ +|||||||+.+. ..+.|+... . ..+.++.+..| ..+||||||++
T Consensus 20 ~~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~ 98 (218)
T 3cp7_A 20 DFVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLE 98 (218)
T ss_dssp EEEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEEC
T ss_pred CeEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEe
Confidence 4689999998 76 999999999653 245555431 1 13455544443 24699999998
Q ss_pred CC--C---CCCc-ceecCCCCCCCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCC
Q 013804 208 AP--K---DKLR-PIPIGVSADLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (436)
Q Consensus 208 ~~--~---~~~~-~~~l~~~~~~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 278 (436)
.+ . ..+. ++.|... ...|+.+.+.||+.... ....... ....... .. .......|..+.|+
T Consensus 99 ~~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C~----~~~~~~~-~~---~~~~~~~Ca~~~GD 168 (218)
T 3cp7_A 99 TKGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSCH----GTATNDP-MG---SSTQGIPCNMTGGS 168 (218)
T ss_dssp CBTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEEE----EECEECT-TS---SSCEEEECCCCTTC
T ss_pred CCCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEee----eeEEcCC-CC---CceEEecCCCCCCC
Confidence 76 1 1123 5555432 24789999999996432 1111110 0000000 00 01112223356899
Q ss_pred CCCeEECC---CCcEEEEEeeeec
Q 013804 279 SGGPLLDS---SGSLIGINTAIYS 299 (436)
Q Consensus 279 SGGPlvd~---~G~VVGI~s~~~~ 299 (436)
|||||+.. .++++||+|++..
T Consensus 169 SGGPlv~~~~g~~~lvGIvS~G~g 192 (218)
T 3cp7_A 169 SGGPWFLGNGTGGAQNSTNSYGYT 192 (218)
T ss_dssp TTCEEEESSSSSSCEEEECCEEET
T ss_pred cCCeeEEccCCCeEEEEEEccccC
Confidence 99999954 3789999999864
No 127
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.24 E-value=2e-11 Score=98.25 Aligned_cols=70 Identities=16% Similarity=0.159 Sum_probs=63.2
Q ss_pred EEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECC--EEEEEEEEee
Q 013804 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGD--QKEKIPVKLE 430 (436)
Q Consensus 353 ~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~ 430 (436)
+|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.....++++.++|.|+| +.+++++++.
T Consensus 5 ~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAP-----------GTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp BEEEECTTSHHHHTTCCT-----------TCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred EEEeeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 688899999999999999 999999999999999999999987666689999999987 5678889887
Q ss_pred cCC
Q 013804 431 PKP 433 (436)
Q Consensus 431 ~~~ 433 (436)
.++
T Consensus 74 ~~~ 76 (95)
T 3id1_A 74 HWA 76 (95)
T ss_dssp TCC
T ss_pred ccc
Confidence 764
No 128
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.24 E-value=1.2e-10 Score=118.26 Aligned_cols=174 Identities=15% Similarity=0.164 Sum_probs=108.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC---------------------cEEeeEEEEEcCC-------CC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------------------SAYDAKIVGFDQD-------KD 200 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------------------~~~~a~vv~~d~~-------~D 200 (436)
...|.|.+|+++ ||||||||+.+. ..+.|+++.. ..+.++-+..|+. +|
T Consensus 145 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nD 223 (408)
T 2xxl_A 145 RFLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHD 223 (408)
T ss_dssp EEEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSC
T ss_pred eEEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccc
Confidence 357999999987 999999999764 4677777531 1234444555654 49
Q ss_pred eEEEEEcCCC---CCCcceecCCCCC----CCCCCEEEEEecCCCCC----CceeEeEEeeeeeeecc--CCCCCCcccE
Q 013804 201 VAVLRIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AATGRPIQDV 267 (436)
Q Consensus 201 lAlLkv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~--~~~~~~~~~~ 267 (436)
|||||++.+. ..+.|+.|..... ...|..+++.||..... .......+.-+...... +.... ....
T Consensus 224 IALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~-~~~~ 302 (408)
T 2xxl_A 224 IALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAV-PLSQ 302 (408)
T ss_dssp CEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSCC-CTTE
T ss_pred eEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcccC-CCce
Confidence 9999998764 3467777754332 46789999999975432 12222223222211110 00000 0122
Q ss_pred EEE----ccccCCCCCCCeE------ECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 268 IQT----DAAINPGNSGGPL------LDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 268 i~~----~~~i~~G~SGGPl------vd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
+-. ....|.|+||||| +.. +| .++||+|++...++.....+...-+....+|+++.++.
T Consensus 303 iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 303 LCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS 374 (408)
T ss_dssp EEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred EeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 322 2467899999999 532 34 68999999854555433456667788888888876654
No 129
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.23 E-value=1.9e-10 Score=113.47 Aligned_cols=170 Identities=16% Similarity=0.152 Sum_probs=102.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC-------cEEee---EEEEEcC--------------CCCeEEEEEc
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-------SAYDA---KIVGFDQ--------------DKDVAVLRID 207 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-------~~~~a---~vv~~d~--------------~~DlAlLkv~ 207 (436)
+.|.|.||+++ ||||||||+.+.....|+++.. ..+.. +-+..|+ .+||||||++
T Consensus 103 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~ 181 (333)
T 1elv_A 103 PWAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLK 181 (333)
T ss_dssp TEEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEES
T ss_pred CceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeC
Confidence 37999999987 9999999998765555655431 22223 4444442 3599999998
Q ss_pred CCC---CCCcceecCCCC---CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccCCC----------CCCcccE
Q 013804 208 APK---DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT----------GRPIQDV 267 (436)
Q Consensus 208 ~~~---~~~~~~~l~~~~---~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~~~----------~~~~~~~ 267 (436)
.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+......... .......
T Consensus 182 ~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~ 261 (333)
T 1elv_A 182 DPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNM 261 (333)
T ss_dssp SCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTE
T ss_pred CCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCe
Confidence 764 346677775432 245699999999975432 12233333222211111000 0011222
Q ss_pred EEE----ccccCCCCCCCeEECC---CC---cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcccc
Q 013804 268 IQT----DAAINPGNSGGPLLDS---SG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (436)
Q Consensus 268 i~~----~~~i~~G~SGGPlvd~---~G---~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~ 326 (436)
+-. ....|.|+|||||+-. +| .++||+|++.. ++. .+....+....+|+++.++.
T Consensus 262 ~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~-C~~---~~vyt~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 262 ICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ-CGT---YGLYTRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS-TTS---EEEEEEGGGGHHHHHHHHHH
T ss_pred ECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC-CCC---CcEEeEHHHHHHHHHHHHhc
Confidence 332 2457899999999842 23 49999999753 432 46667778888888876653
No 130
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.23 E-value=7.9e-11 Score=106.52 Aligned_cols=160 Identities=16% Similarity=0.113 Sum_probs=101.0
Q ss_pred CceEEEEEeeeccCccccccccCcCeEEEEEEEcCCC--EEEecccccCCCCeEEEEecCCcEEe-----eEEEEEcCCC
Q 013804 127 PSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKG--HVVTNYHVIRGASDIRVTFADQSAYD-----AKIVGFDQDK 199 (436)
Q Consensus 127 ~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~-----a~vv~~d~~~ 199 (436)
++||.|...+ ...|.|+.|..+| ++|||+||+.+.........+++.++ ......|+..
T Consensus 16 ~svv~l~~~d--------------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~ 81 (191)
T 1zyo_A 16 ASLVAIKSGP--------------TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKML 81 (191)
T ss_dssp SSEEEEEETT--------------EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTT
T ss_pred CeEEEEEeCC--------------eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCC
Confidence 3588887621 4578899886444 89999999977532222233555444 3344456789
Q ss_pred CeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCC
Q 013804 200 DVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (436)
Q Consensus 200 DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~ 276 (436)
|+||+++.... ....++.+. ....++.|.++|++.........|+.. .. .....+++++...+
T Consensus 82 D~all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~----~~-------~~~~~~~~~~~T~~ 147 (191)
T 1zyo_A 82 DFAIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSS----TS-------EFTWKLTHTCPTAA 147 (191)
T ss_dssp CEEEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEE----EC-------SSTTEEEECCCCCT
T ss_pred cEEEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeeccccee----ec-------cCCcEEEEEcCCCC
Confidence 99999997421 123333342 233589999999876443222233111 10 11256888899999
Q ss_pred CCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchh
Q 013804 277 GNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~ 319 (436)
|.||+|+||.+ .+|||+..... ....+.++-+..++.+
T Consensus 148 G~SGsP~~ng~-~IVGvh~G~~~----~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 148 GWSGTPLYSSR-GVVGMHVGFEE----IGKLNRGVNMFYVANY 185 (191)
T ss_dssp TCTTCEEECSS-CEEEEEEEEEE----TTTEEEEECHHHHHHH
T ss_pred CCCCCcEEcCC-eEEEEEeCccc----CCceeeeeehHHHhhh
Confidence 99999999975 78999987543 2346667766666665
No 131
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.23 E-value=8e-12 Score=99.28 Aligned_cols=72 Identities=18% Similarity=0.284 Sum_probs=63.1
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g 409 (436)
+++|+.+.... .|++|..|.++|||+++||++ ||+|++|||++| .++.++..++....+|
T Consensus 17 ~~lG~~~~~~~-------~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 78 (90)
T 2eaq_A 17 LDFGFTIKWDI-------PGIFVASVEAGSPAEFSQLQV-----------DDEIIAINNTKFSYNDSKEWEEAMAKAQET 78 (90)
T ss_dssp SCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECCTTCHHHHHHHHHHHHHH
T ss_pred CcccEEEEecC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhcCCC
Confidence 57888876432 589999999999999999999 999999999999 8999999999865578
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+++.++|.|+|+
T Consensus 79 ~~v~l~v~R~g~ 90 (90)
T 2eaq_A 79 GHLVMDVRRYGK 90 (90)
T ss_dssp TEEEEEEEEEC-
T ss_pred CEEEEEEEeCCC
Confidence 999999999874
No 132
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=5.7e-12 Score=105.36 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=74.9
Q ss_pred hccccceecceec----ceeeecchhhhhcCc-------cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECC
Q 013804 322 QLVKFGKVTRPIL----GIKFAPDQSVEQLGV-------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNG 390 (436)
Q Consensus 322 ~l~~~g~v~~~~l----Gv~~~~~~~~~~~g~-------~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG 390 (436)
.++++|++.++|+ |+.+.... ..+|+ .|++|..|.+++||+++||++ ||+|++|||
T Consensus 5 ~~~~~g~v~r~~l~~~~~v~l~~~~--~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~vng 71 (117)
T 1uit_A 5 SSGGERRKDRPYVEEPRHVKVQKGS--EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEY-----------GDQLLEFNG 71 (117)
T ss_dssp CCCCCCCSCCCCSCCCEEEEEECSS--CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCT-----------TCEECEETT
T ss_pred cccccCccccccCCCCEEEEEEeCC--CCccEEEEccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECC
Confidence 3567888889999 88877532 22221 589999999999999999999 999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEE
Q 013804 391 KKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKI 425 (436)
Q Consensus 391 ~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (436)
++|.++.++...+....+|+++.|+|.|+++..++
T Consensus 72 ~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 72 INLRSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp EETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred EECCCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 99999988877765556899999999999876544
No 133
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.20 E-value=2.7e-10 Score=115.09 Aligned_cols=171 Identities=18% Similarity=0.207 Sum_probs=102.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC-------CeEEEEecCC--------cEEeeEEEEEcCC----------CCeEEEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA-------SDIRVTFADQ--------SAYDAKIVGFDQD----------KDVAVLR 205 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~-------~~i~V~~~dg--------~~~~a~vv~~d~~----------~DlAlLk 205 (436)
.+.|.|.||+++ ||||||||+.+. ..+.|+++.. ..+.++-+..|+. +||||||
T Consensus 178 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~ 256 (399)
T 1gpz_A 178 HGRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLE 256 (399)
T ss_dssp SSEEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEE
T ss_pred CCCeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEE
Confidence 357999999987 999999999753 2456776532 2244555555543 4999999
Q ss_pred EcCCC---CCCcceecCCCCC-CCCCCEEEEEecCCCCC---CceeEeEEeeeeeeeccCCC------CCCcccEEEE--
Q 013804 206 IDAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAAT------GRPIQDVIQT-- 270 (436)
Q Consensus 206 v~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~vs~~~~~~~~~~~------~~~~~~~i~~-- 270 (436)
++.+. ..+.|+.|..... ...|..+++.||..... .......+.-+......... .......+-.
T Consensus 257 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~ 336 (399)
T 1gpz_A 257 LENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGH 336 (399)
T ss_dssp ESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEEC
T ss_pred ECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEeccc
Confidence 98764 3467777764432 35689999999875332 22223333222211111000 0001122322
Q ss_pred ---ccccCCCCCCCeEECC---CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 271 ---DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 271 ---~~~i~~G~SGGPlvd~---~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
....|.|+|||||+-. ++ .++||+|++.. ++. +.+...-+....+|+++.++
T Consensus 337 ~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~-C~~--~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 337 PSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp GGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT-TTT--TEEEEEEGGGGHHHHHHHTC
T ss_pred CCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC-cCC--CCeEEEEhHHhHHHHHHHhc
Confidence 2467899999999832 34 48999999754 332 34666777888888877654
No 134
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.20 E-value=9.7e-11 Score=112.08 Aligned_cols=150 Identities=12% Similarity=0.095 Sum_probs=83.8
Q ss_pred HhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCC-----CEEEecccccCCC----CeEEEEecCC---------
Q 013804 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSK-----GHVVTNYHVIRGA----SDIRVTFADQ--------- 185 (436)
Q Consensus 124 ~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILT~aHvv~~~----~~i~V~~~dg--------- 185 (436)
.++++|++|.. .+...|+|+||+++ .||||||||+.+. ..++|++..+
T Consensus 20 ~~~~aV~rl~~--------------~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~ 85 (268)
T 1arb_A 20 DIIRAVGAYSK--------------SGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNT 85 (268)
T ss_dssp TGGGGEEEEEE--------------TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTS
T ss_pred HhhceEEEEEe--------------CCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccc
Confidence 45778999864 12468999999972 4999999999752 2455655210
Q ss_pred ------------cEE-eeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCcee-E------
Q 013804 186 ------------SAY-DAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLT-T------ 245 (436)
Q Consensus 186 ------------~~~-~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~-~------ 245 (436)
+.+ ...+......+||||||++.+. + .+..+++.||......... .
T Consensus 86 ~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v---~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~~ 151 (268)
T 1arb_A 86 PASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA---N-----------PAFNLFWAGWDRRDQNYPGAIAIHHPN 151 (268)
T ss_dssp GGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC---C-----------GGGCCEEBCEECCSCCCSCEEEEECGG
T ss_pred cccccccCCcceEEeccceEecCCCCCceEEEEecCCC---C-----------CCCceEEeCcCccCCCCCcceeeccCC
Confidence 111 1223334467899999998642 1 1334555565432211000 0
Q ss_pred eEEeeeeeee-----ccCCCCCCcccEEEE--c---cccCCCCCCCeEECCCCcEEEEEeeeecCCC
Q 013804 246 GVISGLRREI-----SSAATGRPIQDVIQT--D---AAINPGNSGGPLLDSSGSLIGINTAIYSPSG 302 (436)
Q Consensus 246 G~vs~~~~~~-----~~~~~~~~~~~~i~~--~---~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~ 302 (436)
+.+..+.... ..+.. ......+.. . ...|.|+|||||+..+++++||++++...|+
T Consensus 152 ~~l~~i~~~~~~~~~~~~~~-~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~~~C~ 217 (268)
T 1arb_A 152 VAEKRISNSTSPTSFVAWGG-GAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPSSCS 217 (268)
T ss_dssp GCSCEEEEECSCCEEECTTS-SSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECSCCTT
T ss_pred cccEEEEeeccccccccccc-cccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecCcccC
Confidence 0000000000 00100 001123332 1 2478999999999878899999999764454
No 135
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.20 E-value=1.4e-10 Score=122.42 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=93.4
Q ss_pred ccccccccCcCeEEEEEEEcCCCEEEecccccCCC--CeEEEEecC----------CcEEeeEEEEEcCC-------CCe
Q 013804 141 AFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD----------QSAYDAKIVGFDQD-------KDV 201 (436)
Q Consensus 141 ~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d----------g~~~~a~vv~~d~~-------~Dl 201 (436)
||...........+.|.||+++ ||||||||+.+. ..+.|+++. ...+.++-+..|+. +||
T Consensus 334 Pw~v~l~~~~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDI 412 (565)
T 2xrc_A 334 PWQVAIKDASGITCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDI 412 (565)
T ss_dssp TTBCEEEESSSCCCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCC
T ss_pred CcEEEEecCCceeeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccc
Confidence 4433333333567999999987 999999999754 346665532 23345555666654 499
Q ss_pred EEEEEcCCCC-------CCcceecCCC-CCCCCCCEEEEEecCCCCCC----ceeEeEEeeeeeeecc-CCCCCCcccEE
Q 013804 202 AVLRIDAPKD-------KLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISS-AATGRPIQDVI 268 (436)
Q Consensus 202 AlLkv~~~~~-------~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~----~~~~G~vs~~~~~~~~-~~~~~~~~~~i 268 (436)
||||++.+.. ...|+-|... ..+..|+.+++.||...... ......+.-+.. ... +.........+
T Consensus 413 ALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~-C~~~~~~~~~~~~~i 491 (565)
T 2xrc_A 413 ALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISN-CSKFYGNRFYEKEME 491 (565)
T ss_dssp EEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSC-THHHHTTSCCTTTEE
T ss_pred eeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHH-hHHhhccCcCCCceE
Confidence 9999987531 2356666433 23567999999998754321 112222211110 000 00000001122
Q ss_pred EE-----ccccCCCCCCCeEEC--CCCc--EEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 269 QT-----DAAINPGNSGGPLLD--SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 269 ~~-----~~~i~~G~SGGPlvd--~~G~--VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
-. ....+.|+|||||+- .+|+ |+||+|++.. ++.....+...-+....+||++.+.
T Consensus 492 CAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 492 CAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGEN-CGKPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp EEEEC----------CCCEEEEECTTCCEEEEEEECC-------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred EeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCC-CCCCCCCEEEEEHHHHHHHHHHHhc
Confidence 22 235789999999984 2454 8999999854 3322345566777888888887654
No 136
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.16 E-value=4.1e-10 Score=122.76 Aligned_cols=174 Identities=16% Similarity=0.234 Sum_probs=107.9
Q ss_pred cCeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcC-CCCeEEEEEcCCC---CCC
Q 013804 150 PQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKL 213 (436)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~ 213 (436)
....++|.||+++ +|||||||+.+. ..+.|+++. .+.+.+.-+..++ ..||||||++.+. ..+
T Consensus 584 ~~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V 662 (791)
T 4dur_A 584 GMHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKV 662 (791)
T ss_dssp SCEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSC
T ss_pred CCeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCce
Confidence 4578999999987 999999999753 456777643 1244455455554 4699999998753 346
Q ss_pred cceecCCCC-CCCCCCEEEEEecCCCCC----CceeEeEEeeeeeeeccC---CCCCCcccEEEE-----ccccCCCCCC
Q 013804 214 RPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQT-----DAAINPGNSG 280 (436)
Q Consensus 214 ~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~vs~~~~~~~~~---~~~~~~~~~i~~-----~~~i~~G~SG 280 (436)
.++.|.... .+..|..+++.||..... .......+.-+....... .........+-. ....|.|+||
T Consensus 663 ~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSG 742 (791)
T 4dur_A 663 IPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSG 742 (791)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTT
T ss_pred eeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcc
Confidence 677775432 356789999999975322 122333332222211111 011111223332 2457899999
Q ss_pred CeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 281 GPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 281 GPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
|||+-. +| .|+||+|++.. ++.....+.+.-+....+||++.++
T Consensus 743 GPLv~~~~~~~~LvGIvS~G~g-C~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 743 GPLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp CEEEEEETTEEEEEEECCTTTC-CBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred cceEEEeCCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 999843 23 49999998753 3323345667778888888887664
No 137
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.15 E-value=3.3e-10 Score=121.06 Aligned_cols=172 Identities=18% Similarity=0.198 Sum_probs=98.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC-
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (436)
...+.|.||+++ ||||||||+.+. ..+.|+++. +..+.++-+..|++ +||||||++.+.
T Consensus 413 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~ 491 (625)
T 2f83_A 413 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 491 (625)
T ss_dssp EEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC
T ss_pred cEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc
Confidence 468999999987 999999999754 346777642 23456666666654 499999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEecCCCCC-----CceeEeEEeeeeeeecc--CCC----CCCc-ccEEEEccccC
Q 013804 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT----GRPI-QDVIQTDAAIN 275 (436)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~vs~~~~~~~~--~~~----~~~~-~~~i~~~~~i~ 275 (436)
..+.|+.|.... ....|+.+++.||..... .......+.-+...... +.. .... .....-....+
T Consensus 492 ~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C 571 (625)
T 2f83_A 492 YTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 571 (625)
T ss_dssp CBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------
T ss_pred CCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCC
Confidence 246677775433 245688999999874321 11222222211111110 000 0000 01111234578
Q ss_pred CCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 276 ~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
.|+|||||+-. +| .++||+|++.. ++.....+...-+....+|+++.+
T Consensus 572 ~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyT~V~~y~~WI~~~~ 622 (625)
T 2f83_A 572 KGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKT 622 (625)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEECCC-----CCCCEEEEGGGGHHHHHHTC
T ss_pred CCCcccceEEEECCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHH
Confidence 99999999843 45 59999999754 332233455677777888887654
No 138
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.14 E-value=6.4e-11 Score=94.17 Aligned_cols=68 Identities=22% Similarity=0.360 Sum_probs=62.2
Q ss_pred eEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeec
Q 013804 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEP 431 (436)
Q Consensus 352 v~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 431 (436)
++|..+.+++||+++||++ ||+|++|||++|.+++|+..++... +|+++.++|.|+|+.+++++++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQA-----------GDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCT-----------TCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCC-----------CCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 5688899999999999999 9999999999999999999999884 789999999999999888887754
No 139
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=92.87 Aligned_cols=66 Identities=18% Similarity=0.364 Sum_probs=52.1
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEKIP 426 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~ 426 (436)
.|++|..+.+++||+++| |++ ||+|++|||++|. ++.++.+++.. .++.+.++|.|+|+..+++
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~~~ 89 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIER--SKGKLKMVVQRDERATLLN 89 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEC--------
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCceeeee
Confidence 689999999999999999 999 9999999999999 99999999886 3459999999999887766
Q ss_pred EE
Q 013804 427 VK 428 (436)
Q Consensus 427 v~ 428 (436)
++
T Consensus 90 v~ 91 (92)
T 3cyy_A 90 VP 91 (92)
T ss_dssp --
T ss_pred CC
Confidence 54
No 140
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.12 E-value=2.1e-10 Score=118.91 Aligned_cols=178 Identities=17% Similarity=0.176 Sum_probs=104.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC-CcEEeeEEEEEcCC----------------CCeEEEEEcCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-QSAYDAKIVGFDQD----------------KDVAVLRIDAPK 210 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-g~~~~a~vv~~d~~----------------~DlAlLkv~~~~ 210 (436)
...|.|.||+++ ||||+|||+.+. ..+.|+++. .+.+.++-+..|+. +||||||++.+.
T Consensus 241 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v 319 (497)
T 1rrk_A 241 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 319 (497)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCC
T ss_pred CceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCC
Confidence 568999999987 999999999753 468888875 35566666655532 499999998764
Q ss_pred ---CCCcceecCCCC------CCCCCCEEEEEecCCCC------------CCceeEeEEeeee---eeecc--------C
Q 013804 211 ---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGL------------DHTLTTGVISGLR---REISS--------A 258 (436)
Q Consensus 211 ---~~~~~~~l~~~~------~~~~G~~V~~vG~p~g~------------~~~~~~G~vs~~~---~~~~~--------~ 258 (436)
..+.|+.|.... .+..|..+++.||.... ........+.-+. ...+. +
T Consensus 320 ~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 399 (497)
T 1rrk_A 320 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 399 (497)
T ss_dssp CCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccc
Confidence 346777775432 23456655555542111 1112222222111 00010 0
Q ss_pred CC-----CCCcccEEEEc-------cccCCCCCCCeEECC-CC--cEEEEEeeeec-CCCC------CCcc--eeeeeee
Q 013804 259 AT-----GRPIQDVIQTD-------AAINPGNSGGPLLDS-SG--SLIGINTAIYS-PSGA------SSGV--GFSIPVD 314 (436)
Q Consensus 259 ~~-----~~~~~~~i~~~-------~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~~~------~~~~--~~aIP~~ 314 (436)
.. .......+... ...|.|+|||||+-. +| .++||+|++.. .|+. ..+. +...-+.
T Consensus 400 ~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~ 479 (497)
T 1rrk_A 400 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 479 (497)
T ss_dssp TTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGG
T ss_pred cccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHH
Confidence 00 00112334332 357999999999843 34 39999999863 3441 1121 2456677
Q ss_pred ccchhhhhcccccee
Q 013804 315 TVNGIVDQLVKFGKV 329 (436)
Q Consensus 315 ~i~~~l~~l~~~g~v 329 (436)
...+|+++.++...+
T Consensus 480 ~~~~WI~~~~~~~~~ 494 (497)
T 1rrk_A 480 QVLPWLKEKLQDEDL 494 (497)
T ss_dssp GGHHHHHHHTTTSSC
T ss_pred HHHHHHHHHhCcccc
Confidence 888898887765443
No 141
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.11 E-value=6.9e-11 Score=94.03 Aligned_cols=75 Identities=20% Similarity=0.349 Sum_probs=63.3
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHH--HHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~--dl~~~l~~~~~g 409 (436)
..+|+.+...... ..|++|..|.++|||+++||++ ||+|++|||++|.++. ++..++.. +|
T Consensus 13 ~~~G~~l~~~~~~----~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g 75 (91)
T 2pkt_A 13 GPWGFRLVGGKDF----EQPLAISRVTPGSKAALANLCI-----------GDVITAIDGENTSNMTHLEAQNRIKG--CT 75 (91)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CS
T ss_pred CCCCEEEEccCCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 3577777643211 1589999999999999999999 9999999999999988 88888876 78
Q ss_pred CEEEEEEEECCEEE
Q 013804 410 DEVIVEVLRGDQKE 423 (436)
Q Consensus 410 ~~v~l~v~R~g~~~ 423 (436)
+++.++|.|+|+.+
T Consensus 76 ~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 76 DNLTLTVARSEHES 89 (91)
T ss_dssp SEEEEEEEEECCCC
T ss_pred CeEEEEEEECCccc
Confidence 99999999998764
No 142
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.11 E-value=2.2e-10 Score=124.54 Aligned_cols=177 Identities=18% Similarity=0.192 Sum_probs=103.8
Q ss_pred cCeEEEEEEEcCCCEEEecccccCC---CCeEEEEec-CCcEEeeEEEEEcCC----------------CCeEEEEEcCC
Q 013804 150 PQGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFA-DQSAYDAKIVGFDQD----------------KDVAVLRIDAP 209 (436)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~-dg~~~~a~vv~~d~~----------------~DlAlLkv~~~ 209 (436)
....|+|.||+++ ||||||||+.+ ...+.|+++ ..+.+.++.+..|+. +||||||++.+
T Consensus 482 ~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~p 560 (741)
T 3hrz_D 482 GHESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNK 560 (741)
T ss_dssp ----EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSC
T ss_pred CCCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCc
Confidence 3568999999987 99999999974 456788887 345667776666643 49999999875
Q ss_pred C---CCCcceecCCC------CCCCCCCEEEEEecCCCCCCc------------eeEeEEeeee---eeecc--------
Q 013804 210 K---DKLRPIPIGVS------ADLLVGQKVYAIGNPFGLDHT------------LTTGVISGLR---REISS-------- 257 (436)
Q Consensus 210 ~---~~~~~~~l~~~------~~~~~G~~V~~vG~p~g~~~~------------~~~G~vs~~~---~~~~~-------- 257 (436)
. ..+.|+.|... ..+..|..+.+.||....... .....+.-.. .....
T Consensus 561 v~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~ 640 (741)
T 3hrz_D 561 LKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPG 640 (741)
T ss_dssp CCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTT
T ss_pred CcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhhhhhhccc
Confidence 4 34567777522 124567777776764322211 1111111111 00000
Q ss_pred CCC-----CCCcccEEEE-------ccccCCCCCCCeEECC-CCc--EEEEEeeee-cCCCC---CCcc-----eeeeee
Q 013804 258 AAT-----GRPIQDVIQT-------DAAINPGNSGGPLLDS-SGS--LIGINTAIY-SPSGA---SSGV-----GFSIPV 313 (436)
Q Consensus 258 ~~~-----~~~~~~~i~~-------~~~i~~G~SGGPlvd~-~G~--VVGI~s~~~-~~~~~---~~~~-----~~aIP~ 313 (436)
+.. .......+.. +...|.|+|||||+-. +|+ ++||+|++. ..++. .... ++..-+
T Consensus 641 ~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V 720 (741)
T 3hrz_D 641 YDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINL 720 (741)
T ss_dssp CTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEG
T ss_pred cccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEh
Confidence 000 0111233333 2457899999999943 333 999999986 23443 1233 667788
Q ss_pred eccchhhhhccccc
Q 013804 314 DTVNGIVDQLVKFG 327 (436)
Q Consensus 314 ~~i~~~l~~l~~~g 327 (436)
...++|+++.++..
T Consensus 721 ~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 721 FQVLPWLKEKLQDE 734 (741)
T ss_dssp GGSHHHHHHHTTTS
T ss_pred HHhHHHHHHHhcCC
Confidence 88999999887654
No 143
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.09 E-value=1.1e-10 Score=93.91 Aligned_cols=81 Identities=23% Similarity=0.344 Sum_probs=64.2
Q ss_pred ceecceeeecchhhhhc--CccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~--g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~ 408 (436)
.++||+.+........+ ...|++|..|.+++||+++||++ ||+|++|||++|.++.++........+
T Consensus 13 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 13 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 46889888742211111 23799999999999999999999 999999999999998887655444347
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|++++++|.|+|+.
T Consensus 82 g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 82 GTAVQMRVWRERET 95 (97)
T ss_dssp CSEEEEEEECCSSC
T ss_pred CCeEEEEEEeCCcc
Confidence 99999999999864
No 144
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.07 E-value=2.7e-10 Score=94.17 Aligned_cols=84 Identities=23% Similarity=0.295 Sum_probs=71.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCc-ccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl-~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+.... +..|++|..|.+++||+++|| ++ ||+|++|||++|.+ ++|+.+++.. .+
T Consensus 13 ~glG~~~~~~~-----~~~~~~V~~v~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 75 (112)
T 1qau_A 13 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 75 (112)
T ss_dssp TBTSEEEEECS-----SSSCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH-SC
T ss_pred CceeEEEEecC-----CCCCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 45888876532 125899999999999999998 99 99999999999999 9999999987 57
Q ss_pred CCEEEEEEEECCEEEEEEEEeecC
Q 013804 409 GDEVIVEVLRGDQKEKIPVKLEPK 432 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~~~~~ 432 (436)
|+.+.++|.|+|+..++++.+...
T Consensus 76 g~~v~l~v~R~g~~~~~~~~~~~~ 99 (112)
T 1qau_A 76 SETHVVLILRGPEGFTTHLETTFT 99 (112)
T ss_dssp SSSEEEEEEECCTTSEEEEEEEEC
T ss_pred CCcEEEEEEeCCcccceEeeeecc
Confidence 899999999999888877776543
No 145
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.05 E-value=2.4e-10 Score=101.32 Aligned_cols=82 Identities=18% Similarity=0.300 Sum_probs=68.4
Q ss_pred cceecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHH-HHHHHhcCCC
Q 013804 330 TRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD-LYRILDQCKV 408 (436)
Q Consensus 330 ~~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~d-l~~~l~~~~~ 408 (436)
.++|||+.+.... .|++|..+.++|||+++||++ ||+|++|||++|.++.+ +...+....+
T Consensus 14 ~~~~lG~~~~~~~-------~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 14 QDGKIGLRLKSID-------NGIFVQLVQANSPASLVGLRF-----------GDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp TTSCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCcEeEEEEeCC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4689999998643 689999999999999999999 99999999999999988 6655555467
Q ss_pred CCEEEEEEEECCEEEEEEEEe
Q 013804 409 GDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~~ 429 (436)
|++++++|.|+++.++++++.
T Consensus 76 ~~~v~l~vr~~~~~~~v~l~~ 96 (166)
T 1w9e_A 76 GEKITMTIRDRPFERTITMHK 96 (166)
T ss_dssp SSEEEEEEECCTTCEEEEEEC
T ss_pred CCEEEEEEEcCCCcEEEEEec
Confidence 889999994444777777663
No 146
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.04 E-value=2.4e-10 Score=90.95 Aligned_cols=73 Identities=25% Similarity=0.390 Sum_probs=58.2
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~ 410 (436)
.+|+.+.... +..|++|..|.++|||+++||++ ||+|++|||++|. +++++..++... |+
T Consensus 15 ~~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~ 76 (91)
T 2vsp_A 15 GYGFHLNAIR-----GLPGSFIKEVQKGGPADLAGLED-----------EDVIIEVNGVNVLDEPYEKVVDRIQSS--GK 76 (91)
T ss_dssp BTSCCCBCCT-----TCSCCBC-CCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--CS
T ss_pred cccEEEEecc-----CCCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 4677765422 12689999999999999999999 9999999999999 999999999874 89
Q ss_pred EEEEEEEECCEEE
Q 013804 411 EVIVEVLRGDQKE 423 (436)
Q Consensus 411 ~v~l~v~R~g~~~ 423 (436)
+++|+|.|+++..
T Consensus 77 ~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 77 NVTLLVCGKKAQD 89 (91)
T ss_dssp EEEEEEEC-----
T ss_pred EEEEEEEeCCccc
Confidence 9999999988754
No 147
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.04 E-value=1.8e-10 Score=92.64 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=64.3
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+.........+..|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++..++.. .
T Consensus 14 ~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~ 80 (97)
T 2jil_A 14 NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--C 80 (97)
T ss_dssp TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--S
T ss_pred CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 357888764321111123689999999999999999 999 99999999999999 9999999987 7
Q ss_pred CCEEEEEEEECCEEE
Q 013804 409 GDEVIVEVLRGDQKE 423 (436)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (436)
|+++.|+|.|+++.+
T Consensus 81 g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 81 GQEAALLIEYDVSET 95 (97)
T ss_dssp CSEEEEEEEEECCCC
T ss_pred CCeEEEEEEeCCCcC
Confidence 899999999988653
No 148
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=9.4e-11 Score=99.00 Aligned_cols=83 Identities=20% Similarity=0.268 Sum_probs=69.6
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGD 410 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~ 410 (436)
.+||+.+...... ....|++|..|.+++||+++| |++ ||+|++|||++|.++.++..+|.. .+|+
T Consensus 32 ~~lG~~~~~~~~~--~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~l~~-~~g~ 97 (124)
T 1wh1_A 32 DKLGLTVCYRTDD--EDDIGIYISEIDPNSIAAKDGRIRE-----------GDRIIQINGIEVQNREEAVALLTS-EENK 97 (124)
T ss_dssp CCCCEEEECCCCC--SSCCCEEEEEECSSSHHHHTCCCCT-----------TCEEEEESSCBCCSHHHHHHHHTC-SSCC
T ss_pred CcccEEEEecCCC--CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CCCC
Confidence 5689998764311 113699999999999999999 999 999999999999999999999987 5789
Q ss_pred EEEEEEEECCEEEEEEEE
Q 013804 411 EVIVEVLRGDQKEKIPVK 428 (436)
Q Consensus 411 ~v~l~v~R~g~~~~~~v~ 428 (436)
++.|+|.|+|+.++....
T Consensus 98 ~v~l~v~R~g~~~~~~~~ 115 (124)
T 1wh1_A 98 NFSLLIARPELQLDEGWM 115 (124)
T ss_dssp SCCEEEEECSSCCCCCCC
T ss_pred EEEEEEEECCEEeecccC
Confidence 999999999987654433
No 149
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=2.1e-10 Score=94.62 Aligned_cols=82 Identities=23% Similarity=0.330 Sum_probs=62.4
Q ss_pred ceecceeeecchhhhhc--CccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~--g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~ 408 (436)
+..||+.+........+ ...|++|..|.+++||+++||++ ||+|++|||++|.+..++........+
T Consensus 25 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 25 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 46788888642211111 23799999999999999999999 999999999999996554443332247
Q ss_pred CCEEEEEEEECCEEE
Q 013804 409 GDEVIVEVLRGDQKE 423 (436)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (436)
|++++|+|.|+|+.+
T Consensus 94 g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 94 GTAVQMRVWRESGPS 108 (110)
T ss_dssp CSEEEEEEEECSSCC
T ss_pred CCeEEEEEEECCccC
Confidence 999999999998753
No 150
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=1.9e-10 Score=93.21 Aligned_cols=74 Identities=24% Similarity=0.298 Sum_probs=60.8
Q ss_pred ceecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~ 408 (436)
.++||+.+..... + -.|++|..|.+++||+++||++ ||+|++|||++|.++ .++...+. .
T Consensus 21 ~~~lG~~~~~~~~---~-~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~---~ 82 (100)
T 2eeh_A 21 AGRLGFSVRGGSE---H-GLGIFVSKVEEGSSAERAGLCV-----------GDKITEVNGLSLESTTMGSAVKVLT---S 82 (100)
T ss_dssp SSSCSEEEECCTT---T-TCCEEEEEECTTSHHHHHTCCS-----------SCEEEEETTEECSSCCHHHHHHHHH---S
T ss_pred CCCccEEEEcccc---C-CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHhhc---C
Confidence 4689999876431 1 1689999999999999999999 999999999999985 55555554 3
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|+++.|+|.|+|+.
T Consensus 83 ~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 83 SSRLHMMVRRMGSG 96 (100)
T ss_dssp CSSEEEEEEECSCC
T ss_pred CCEEEEEEEECCcC
Confidence 78999999999864
No 151
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.03 E-value=5.8e-10 Score=87.84 Aligned_cols=73 Identities=19% Similarity=0.310 Sum_probs=61.8
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
..+|+.+...... ..|++|..|.+++||+++||++ ||+|++|||++|.+ ++++.+++....
T Consensus 12 ~~lG~~l~~~~~~----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~-- 74 (87)
T 2pa1_A 12 APWGFRITGGRDF----HTPIMVTKVAERGKAKDADLRP-----------GDIIVAINGESAEGMLHAEAQSKIRQSP-- 74 (87)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECSSSHHHHTTCCT-----------TCEEEEETTEESTTCCHHHHHHHHHTCC--
T ss_pred CccCEEEecccCC----CCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 4578887643211 1589999999999999999999 99999999999999 899999998743
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+++.++|.|+|+
T Consensus 75 ~~v~l~v~R~~~ 86 (87)
T 2pa1_A 75 SPLRLQLDRITS 86 (87)
T ss_dssp SSEEEEEEECCC
T ss_pred CeEEEEEEecCC
Confidence 889999999875
No 152
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.01 E-value=4.1e-10 Score=117.22 Aligned_cols=176 Identities=17% Similarity=0.177 Sum_probs=96.7
Q ss_pred CcCeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC-----CcEEeeEEEEEcCC----------------CCeEEE
Q 013804 149 VPQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQD----------------KDVAVL 204 (436)
Q Consensus 149 ~~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-----g~~~~a~vv~~d~~----------------~DlAlL 204 (436)
.....|.|.||+++ ||||+|||+.+. ..+.|+++. ++.+.++-+..|+. +|||||
T Consensus 244 ~~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl 322 (509)
T 2odp_A 244 KSQETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALL 322 (509)
T ss_dssp ----CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEE
T ss_pred CCCcEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCCCeEEE
Confidence 34567999999987 999999999753 456777754 34566665655542 599999
Q ss_pred EEcCCC---CCCcceecCCCC------CCCCCCEEEEEecCCCCCCcee------------EeEEeeeeeeecc------
Q 013804 205 RIDAPK---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGLDHTLT------------TGVISGLRREISS------ 257 (436)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~------~~~~G~~V~~vG~p~g~~~~~~------------~G~vs~~~~~~~~------ 257 (436)
|++.+. ..+.|+.|.... ....|..+.+.||......... .-.+..+....+.
T Consensus 323 ~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~ 402 (509)
T 2odp_A 323 KLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQE 402 (509)
T ss_dssp EESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGC
T ss_pred EECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhcc
Confidence 998764 246677775332 1245666665555322111111 1111000000010
Q ss_pred ---CC-----CCCCcccEEEEc----cccCCCCCCCeEECC-CC--cEEEEEeeeec-CCCC-----------CCcc---
Q 013804 258 ---AA-----TGRPIQDVIQTD----AAINPGNSGGPLLDS-SG--SLIGINTAIYS-PSGA-----------SSGV--- 307 (436)
Q Consensus 258 ---~~-----~~~~~~~~i~~~----~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~-~~~~-----------~~~~--- 307 (436)
+. ........+... ...|.|+|||||+-. +| .++||+|++.. .|+. ..+.
T Consensus 403 ~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~ 482 (509)
T 2odp_A 403 KTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPP 482 (509)
T ss_dssp TTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCC
T ss_pred cccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCC
Confidence 00 000112334332 357899999999843 23 49999999863 4541 1111
Q ss_pred -eeeeeeeccchhhhhccc
Q 013804 308 -GFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 308 -~~aIP~~~i~~~l~~l~~ 325 (436)
++..-+....+|+++.++
T Consensus 483 ~~vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 483 RDFHINLFRMQPWLRQHLG 501 (509)
T ss_dssp CEEEEEGGGCHHHHHHHHT
T ss_pred CceeeeHHHHhHHHHHHhC
Confidence 355667788888887654
No 153
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.01 E-value=6.9e-10 Score=117.53 Aligned_cols=72 Identities=25% Similarity=0.384 Sum_probs=67.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|..|.++|||+++||++ ||+|++|||++| +..++.+++...++|++|+|+|.|+|+.+++++++
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~-----------GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 563 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSA-----------GDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELMTLELTW 563 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CeEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEe
Confidence 489999999999999999999 999999999999 58899999988789999999999999999999998
Q ss_pred ecCC
Q 013804 430 EPKP 433 (436)
Q Consensus 430 ~~~~ 433 (436)
.+.+
T Consensus 564 ~~~~ 567 (597)
T 4fgm_A 564 QEPA 567 (597)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 7654
No 154
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=99.01 E-value=1e-09 Score=92.80 Aligned_cols=66 Identities=27% Similarity=0.372 Sum_probs=59.5
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|..|.+++||+++ |++ ||+|++|||++|.+++|+..++....+|++++++| |+|+ +++++
T Consensus 25 ~gv~V~~V~~~spA~~a-L~~-----------GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~---~~v~l 88 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-LTP-----------GLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT---FHLKT 88 (125)
T ss_dssp CCEEEEEECSSSGGGGT-SCT-----------TCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE---EEEEC
T ss_pred CceEEEEECCCChHHHh-cCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE---EEEEE
Confidence 79999999999999999 999 99999999999999999999998767899999999 9887 55555
Q ss_pred ec
Q 013804 430 EP 431 (436)
Q Consensus 430 ~~ 431 (436)
.+
T Consensus 89 ~~ 90 (125)
T 2hga_A 89 GR 90 (125)
T ss_dssp CB
T ss_pred ec
Confidence 43
No 155
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.98 E-value=8.5e-10 Score=89.86 Aligned_cols=78 Identities=27% Similarity=0.362 Sum_probs=63.1
Q ss_pred cceecceeeec---chhhh-hc----CccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHH
Q 013804 330 TRPILGIKFAP---DQSVE-QL----GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDL 399 (436)
Q Consensus 330 ~~~~lGv~~~~---~~~~~-~~----g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl 399 (436)
.+++||+.+.. ....+ .+ ...|++|..|.++|||+++||++ ||+|++|||++|.+ ++++
T Consensus 17 ~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp TEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHH
T ss_pred CCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHH
Confidence 45689999882 11111 12 23799999999999999999999 99999999999976 5699
Q ss_pred HHHHhcCCCCCEEEEEEEEC
Q 013804 400 YRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 400 ~~~l~~~~~g~~v~l~v~R~ 419 (436)
..++.. .+|+.+.++|.|+
T Consensus 86 ~~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTC-TTCSEEEEEEEEC
T ss_pred HHHHHh-CCCCEEEEEEEcC
Confidence 998876 6789999999984
No 156
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.98 E-value=7.1e-10 Score=93.63 Aligned_cols=74 Identities=26% Similarity=0.369 Sum_probs=63.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
..+|+.+..... .|++|..|.+++||+++||++ ||+|++|||++|.++ +++.+++....+|
T Consensus 39 ~~lG~~l~~~~~------~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 101 (124)
T 3tsv_A 39 DSVGLRLAGGND------VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKG 101 (124)
T ss_dssp SCCCEEEEECTT------SCEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECSSCCHHHHHHHHHHSCTT
T ss_pred CceeEEEecCCC------CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCC
Confidence 457777654221 689999999999999999999 999999999999998 8999988876789
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
++++|+|.|+++.
T Consensus 102 ~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 102 EEVTILAQKKKDV 114 (124)
T ss_dssp CEEEEEEEECHHH
T ss_pred CEEEEEEEECCch
Confidence 9999999998764
No 157
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.97 E-value=2.7e-10 Score=91.48 Aligned_cols=77 Identities=22% Similarity=0.388 Sum_probs=63.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... -+..|++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .|+
T Consensus 15 ~~G~~l~~~~~~--~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~ 79 (96)
T 2v90_A 15 GFGFLLREEKGL--DGRPGQFLWEVDPGLPAKKAGMQA-----------GDRLVAVAGESVEGLGHEETVSRIQG--QGS 79 (96)
T ss_dssp BSCEEEEEEECT--TSCEEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTT
T ss_pred cccEEEEeccCC--CCCCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 467776542210 112589999999999999999999 99999999999999 7999999987 389
Q ss_pred EEEEEEEECCEEEE
Q 013804 411 EVIVEVLRGDQKEK 424 (436)
Q Consensus 411 ~v~l~v~R~g~~~~ 424 (436)
++.|+|.|+++..+
T Consensus 80 ~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 80 CVSLTVVDPEADRE 93 (96)
T ss_dssp EEEEEEECCCTTSC
T ss_pred EEEEEEECCCCccc
Confidence 99999999987543
No 158
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=85.92 Aligned_cols=72 Identities=13% Similarity=0.209 Sum_probs=59.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... ..+++|..|.+++||+++||++ ||+|++|||++|.++ .++..++.. .|+
T Consensus 14 ~~G~~l~~g~~~----~~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~ 76 (88)
T 2uzc_A 14 PWGFRLQGGKDF----NMPLTISSLKDGGKAAQANVRI-----------GDVVLSIDGINAQGMTHLEAQNKIKG--CTG 76 (88)
T ss_dssp CCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCS
T ss_pred cccEEEECcCCC----CCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCC
Confidence 467777642211 1589999999999999999999 999999999999998 788877765 389
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
++.++|.|+|+
T Consensus 77 ~v~l~v~R~g~ 87 (88)
T 2uzc_A 77 SLNMTLQRESD 87 (88)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEEeCCC
Confidence 99999999874
No 159
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.96 E-value=1.3e-09 Score=84.24 Aligned_cols=58 Identities=19% Similarity=0.400 Sum_probs=51.6
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.|++|..+.+++||+++| |++ ||+|++|||++|. ++.++.+++... ++++.++|.|+|
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~g 81 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEEeCC
Confidence 589999999999999999 999 9999999999999 999999988863 358999999875
No 160
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.95 E-value=4.2e-10 Score=95.26 Aligned_cols=82 Identities=23% Similarity=0.317 Sum_probs=70.7
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCc-ccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl-~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+.... +..|++|..|.+++||+++|| ++ ||+|++|||++|.+ ++++.+++.. .+
T Consensus 20 ~glG~~~~~~~-----~~~~~~V~~V~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 82 (127)
T 1b8q_A 20 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 82 (127)
T ss_dssp SCCSCCEEECT-----TSSCEEECCCSSSSSHHHHSSCCT-----------TTCCCEETTEECSSSCHHHHHHHHHS-CC
T ss_pred CcEeEEEEecC-----CCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 46788876532 125899999999999999998 99 99999999999999 9999999987 57
Q ss_pred CCEEEEEEEECCEEEEEEEEee
Q 013804 409 GDEVIVEVLRGDQKEKIPVKLE 430 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~~~ 430 (436)
|+.+.++|.|+|+.+++++++.
T Consensus 83 g~~v~l~v~R~g~~~~~~~~~~ 104 (127)
T 1b8q_A 83 SETHVVLILRGPEGFTTHLETT 104 (127)
T ss_dssp SSCEEEEEECCCCSEEECCCCC
T ss_pred CCeEEEEEEeCCceEEEEEEEE
Confidence 8999999999999888877764
No 161
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.95 E-value=5.3e-10 Score=91.12 Aligned_cols=78 Identities=15% Similarity=0.283 Sum_probs=65.1
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.++|+.+...... -.+++|..|.+++||+++||++ ||+|++|||++|.+ +.++.+++... |
T Consensus 15 ~~lG~~l~~g~~~----~~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g 77 (103)
T 1v5l_A 15 APWGFRLSGGIDF----NQPLVITRITPGSKAAAANLCP-----------GDVILAIDGFGTESMTHADAQDRIKAA--S 77 (103)
T ss_dssp SCCSBCCEEETTT----TEEEECSCBCTTSTTGGGTCCT-----------TCBEEEETTEECSSCCHHHHHHHHTTC--C
T ss_pred CCcCEEEeccccC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 4688887642211 1489999999999999999999 99999999999999 99999999874 8
Q ss_pred CEEEEEEEECCEEEEEE
Q 013804 410 DEVIVEVLRGDQKEKIP 426 (436)
Q Consensus 410 ~~v~l~v~R~g~~~~~~ 426 (436)
+++.|+|.|+++.+...
T Consensus 78 ~~v~l~v~R~g~~~~~~ 94 (103)
T 1v5l_A 78 YQLCLKIDRAETRLWSP 94 (103)
T ss_dssp SEEECEECCCTTTTSCS
T ss_pred CeEEEEEEECCeEccCC
Confidence 99999999998765433
No 162
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.95 E-value=1.2e-09 Score=87.34 Aligned_cols=69 Identities=36% Similarity=0.481 Sum_probs=57.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEE
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 412 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v 412 (436)
.+|+.+... .|++|..|.+++||+++||++ ||+|++|||++|.++.+. +++...++|+++
T Consensus 20 ~~G~~l~~~--------~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v 79 (93)
T 2dls_A 20 GFGFTVSGD--------RIVLVQSVRPGGAAMKAGVKE-----------GDRIIKVNGTMVTNSSHL-EVVKLIKSGAYV 79 (93)
T ss_dssp SCCEEEECS--------SSCEEEEECSSSTTTTTTCCS-----------SCEEEEETTEECSSSCHH-HHHHHHTSSSEE
T ss_pred ceeEEEeCC--------CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHH-HHHHhhcCCCEE
Confidence 467776532 589999999999999999999 999999999999997655 344444579999
Q ss_pred EEEEEECCE
Q 013804 413 IVEVLRGDQ 421 (436)
Q Consensus 413 ~l~v~R~g~ 421 (436)
+|+|.|++.
T Consensus 80 ~l~v~R~~~ 88 (93)
T 2dls_A 80 ALTLLGSSS 88 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999999864
No 163
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.4e-10 Score=96.03 Aligned_cols=83 Identities=22% Similarity=0.300 Sum_probs=65.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEE
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 412 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v 412 (436)
.+|+.+.... .++ .|++|..|.+++||+++||++ ||+|++|||++|.++.+ .+++...+.++++
T Consensus 33 ~lG~~~~~~~---~~~-~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~-~~~~~~~~~~~~v 96 (128)
T 1uf1_A 33 SLGLTIRGGA---EYG-LGIYITGVDPGSEAEGSGLKV-----------GDQILEVNGRSFLNILH-DEAVRLLKSSRHL 96 (128)
T ss_dssp CCCEEEECCT---TTT-CCCEEEEECTTCHHHHHTCCT-----------TCEEEEETTEECSSCCH-HHHHHHHTTCSEE
T ss_pred ccCEEEECcc---cCC-CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCH-HHHHHHHhcCCeE
Confidence 4677776522 111 489999999999999999999 99999999999999765 4444444557899
Q ss_pred EEEEEECCEEEEEEEEeec
Q 013804 413 IVEVLRGDQKEKIPVKLEP 431 (436)
Q Consensus 413 ~l~v~R~g~~~~~~v~~~~ 431 (436)
.|+|.|+|+..++++++.+
T Consensus 97 ~l~v~R~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 97 ILTVKDVGRLPHARTTVDE 115 (128)
T ss_dssp EEEEECCSCCSSCSCCCCS
T ss_pred EEEEEECCccccccccccc
Confidence 9999999998887777653
No 164
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.93 E-value=2.2e-09 Score=90.18 Aligned_cols=77 Identities=25% Similarity=0.372 Sum_probs=62.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++.+++....+|
T Consensus 42 ~lG~~l~~~~~~-~~g~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 42 GLGFSITSRDVT-IGGSAPIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp CCCEEEECCCCS-SSSSCCEEEEEECTTSHHHHHTCCCS-----------SSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred cEeEEEEeccCC-cCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 467777643211 1123689999999999999999 999 99999999999998 58999888876678
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
++++|+|.|+|+
T Consensus 110 ~~v~l~v~R~g~ 121 (121)
T 2kom_A 110 GTVSLLVFRQED 121 (121)
T ss_dssp CEEEEEEEECCC
T ss_pred CEEEEEEEeCCC
Confidence 999999999874
No 165
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=6.9e-10 Score=88.82 Aligned_cols=74 Identities=20% Similarity=0.331 Sum_probs=61.7
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
..+|+.+...... ..|++|..|.+++||+++||++ ||+|++|||++|.++ .++.+++... .
T Consensus 16 ~~lG~~l~~g~~~----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~- 78 (94)
T 1vb7_A 16 APWGFRISGGRDF----HTPIIVTKVTERGKAEAADLRP-----------GDIIVAINGQSAENMLHAEAQSKIRQS-A- 78 (94)
T ss_dssp SCCSBCCEEETTT----TEEEECCCBCTTSSHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC-C-
T ss_pred CCccEEEecccCC----CCCeEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-C-
Confidence 3577777642211 2589999999999999999999 999999999999997 8999988874 3
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.|+|.|+|+.
T Consensus 79 ~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 79 SPLRLQLDRSSGP 91 (94)
T ss_dssp SSEEEEEECCCCC
T ss_pred CcEEEEEEECCcC
Confidence 8899999999865
No 166
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=1.5e-09 Score=88.24 Aligned_cols=78 Identities=23% Similarity=0.359 Sum_probs=60.0
Q ss_pred ceecceeeecch--hhhhcCc---cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHH
Q 013804 331 RPILGIKFAPDQ--SVEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRI 402 (436)
Q Consensus 331 ~~~lGv~~~~~~--~~~~~g~---~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~ 402 (436)
++++|+.+.... ..+.++. .|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++.++
T Consensus 15 ~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 15 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp -CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHH
T ss_pred CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHH
Confidence 478999887522 1222222 699999999999999999 999 99999999999998 9999999
Q ss_pred HhcCCCCCEEEEEEEECCE
Q 013804 403 LDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 403 l~~~~~g~~v~l~v~R~g~ 421 (436)
+... ++++.++|.|.++
T Consensus 84 l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 84 IRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHTC--CSSEEEEEECCCC
T ss_pred HHhC--CCcEEEEEEECCC
Confidence 9874 4589999999754
No 167
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=1e-09 Score=92.26 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=64.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+............+++|..|.+++||+++| |++ ||+|++|||++|.+ ++|+.+++....+
T Consensus 27 ~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 95 (122)
T 1v5q_A 27 TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSI 95 (122)
T ss_dssp SSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCT-----------TCCEEEETTEESSSSCHHHHHHHHHHHTT
T ss_pred CccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 356777664211111112568999999999999999 999 99999999999988 9999999988666
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|++++|+|.|+++.
T Consensus 96 g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 96 TSKVTLEIEFDVAE 109 (122)
T ss_dssp TTCEEEEEEEECCC
T ss_pred CCeEEEEEEECCcc
Confidence 89999999998864
No 168
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.92 E-value=2.7e-09 Score=84.35 Aligned_cols=74 Identities=16% Similarity=0.312 Sum_probs=59.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
..+|+.+...... ..|++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .|
T Consensus 13 ~~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g 75 (89)
T 2q3g_A 13 APWGFRLQGGKDF----NVPLSISRLTPGGKAAQAGVAV-----------GDWVLSIDGENAGSLTHIEAQNKIRA--CG 75 (89)
T ss_dssp SCCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHT--CT
T ss_pred CcccEEEECcCCC----CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 3477777542211 1589999999999999999999 99999999999994 5788777765 48
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.++|.|+++.
T Consensus 76 ~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 76 ERLSLGLSRAITS 88 (89)
T ss_dssp TEEEEEEEEECCC
T ss_pred CEEEEEEEeCCCC
Confidence 8999999998753
No 169
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.92 E-value=3.2e-10 Score=94.57 Aligned_cols=78 Identities=24% Similarity=0.335 Sum_probs=63.1
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC---CHHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~---s~~dl~~~l~~~~ 407 (436)
..+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++..
T Consensus 32 ~~lG~~i~~~~~~-~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~-- 97 (117)
T 2o2t_A 32 GGLGFSVVGLRSE-NRGELGIFVQEIQEGSVAHRDGRLKE-----------TDQILAINGQALDQTITHQQAISILQK-- 97 (117)
T ss_dssp SCSSCCEEEEECC-C--CEEEEECCCCTTSHHHHHCCCCT-----------TCEEEEETTEECCTTSCHHHHHHHHHH--
T ss_pred CCCCEEEeecccC-CCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--
Confidence 3577776642211 0112689999999999999999 999 9999999999999 89999998876
Q ss_pred CCCEEEEEEEECCEEE
Q 013804 408 VGDEVIVEVLRGDQKE 423 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~~ 423 (436)
.|+++.|+|.|+++..
T Consensus 98 ~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 98 AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp CCSEEEEEEESSCCGG
T ss_pred CCCEEEEEEEeCCcce
Confidence 5899999999998754
No 170
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.92 E-value=2.7e-09 Score=83.52 Aligned_cols=71 Identities=24% Similarity=0.344 Sum_probs=58.5
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+..... ...|++|..|.+++||+++| |++ ||+|++|||++|. ++.++.+++....+|
T Consensus 12 g~G~~i~~~~~----~~~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 76 (85)
T 2i04_A 12 GFGFTVVGGDE----PDEFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 76 (85)
T ss_dssp BSSEEEEECCS----TTBCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCTT
T ss_pred CCCEEEEcccC----CCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 46776653211 12579999999999999999 999 9999999999999 568999999886678
Q ss_pred CEEEEEEEE
Q 013804 410 DEVIVEVLR 418 (436)
Q Consensus 410 ~~v~l~v~R 418 (436)
++++++|.|
T Consensus 77 ~~v~l~v~R 85 (85)
T 2i04_A 77 ASVDLELCR 85 (85)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999999876
No 171
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.91 E-value=1.6e-09 Score=87.28 Aligned_cols=59 Identities=29% Similarity=0.492 Sum_probs=53.3
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++.. +|++++|+|.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKV-----------GDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEEC--
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 689999999999999999 999 999999999999997 788888876 78999999999874
No 172
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.91 E-value=5.4e-10 Score=91.03 Aligned_cols=81 Identities=12% Similarity=0.159 Sum_probs=64.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... ..+++|..|.+++||+++||++ ||+|++|||++|.++ .++..++.. .|+
T Consensus 16 ~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~ 78 (103)
T 1wf7_A 16 PWGFRLQGGKDF----NMPLTISSLKDGGKASQAHVRI-----------GDVVLSIDGISAQGMTHLEAQNKIKA--CTG 78 (103)
T ss_dssp CCSCCEEEETTT----TEEEEECCCCTTCHHHHTTCCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--CSS
T ss_pred ccCEEEeccccC----CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 367776532211 1468999999999999999999 999999999999987 566666665 478
Q ss_pred EEEEEEEECCEEEEEEEEee
Q 013804 411 EVIVEVLRGDQKEKIPVKLE 430 (436)
Q Consensus 411 ~v~l~v~R~g~~~~~~v~~~ 430 (436)
++.|+|.|+++..++++++.
T Consensus 79 ~v~l~v~R~g~~~~~~v~p~ 98 (103)
T 1wf7_A 79 SLNMTLQRASAAAKSEPVSS 98 (103)
T ss_dssp EEEEEECCCSCCCCCCCCCC
T ss_pred eEEEEEEeCCCcCCCCCCCC
Confidence 99999999999887777654
No 173
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.91 E-value=1.3e-09 Score=89.49 Aligned_cols=78 Identities=23% Similarity=0.318 Sum_probs=62.8
Q ss_pred eecceeeecchhhhhc-CccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVEQL-GVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~-g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
..||+.+......... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 25 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 91 (108)
T 2jre_A 25 SSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEP-----------NDKILRVDDVNVQGMAQSDVVEVLRN-- 91 (108)
T ss_dssp SCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCS-----------SEEEEEETTEECTTSCHHHHHHHHHH--
T ss_pred CCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 4678887642211111 23699999999999999999 999 99999999999998 6788888876
Q ss_pred CCCEEEEEEEECCEE
Q 013804 408 VGDEVIVEVLRGDQK 422 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~ 422 (436)
.|+++.|+|.|+++.
T Consensus 92 ~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 92 AGNPVRLLLIRRLPL 106 (108)
T ss_dssp HCSEEEEEEEECCCC
T ss_pred CCCeEEEEEEeCCcC
Confidence 688999999998864
No 174
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.91 E-value=3e-09 Score=87.67 Aligned_cols=79 Identities=24% Similarity=0.371 Sum_probs=64.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++.+++....+
T Consensus 22 ~glG~~~~~~~~~-~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 22 EGLGFSITSRDVT-IGGSAPIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp TBTCEEEEECSCS-SSSSSCEEEEEECSSSHHHHHCSSCT-----------TCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred CccCEEEEeccCC-CCCCcCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3578887643211 1123689999999999999999 999 99999999999965 5899988887667
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|+.+.|+|.|+++.
T Consensus 90 g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 90 EGTVSLLVFRQEEA 103 (111)
T ss_dssp SSEEEEEEEECCCC
T ss_pred CCeEEEEEEeCCCC
Confidence 99999999998864
No 175
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.91 E-value=2.7e-09 Score=87.08 Aligned_cols=86 Identities=21% Similarity=0.191 Sum_probs=59.7
Q ss_pred ecceeeecchhh-hhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 333 ILGIKFAPDQSV-EQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 333 ~lGv~~~~~~~~-~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
.+|+.+...... ...+-.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .
T Consensus 15 glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (105)
T 2awx_A 15 GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNSVSLEEVTHEEAVTALKN--T 81 (105)
T ss_dssp BSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHS--C
T ss_pred CCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 577877642211 11123699999999999999999 999 99999999999976 5666666654 4
Q ss_pred CCEEEEEEEECCEEEEEEEEeec
Q 013804 409 GDEVIVEVLRGDQKEKIPVKLEP 431 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~~~v~~~~ 431 (436)
|+.+.|+|.|+++.....++...
T Consensus 82 ~~~v~l~v~R~~~~~~~~~~p~~ 104 (105)
T 2awx_A 82 SDFVYLKVAKPTSMYISRHHHHH 104 (105)
T ss_dssp CSEEEEEEECCCC----------
T ss_pred CCeEEEEEEcCCCCCCccccccC
Confidence 79999999999998887776543
No 176
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.90 E-value=1.7e-09 Score=84.66 Aligned_cols=72 Identities=10% Similarity=0.237 Sum_probs=57.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... ..|++|..|.+++||+++||++ ||+|++|||++|.++ .++...+.. .++
T Consensus 12 ~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~ 74 (85)
T 1rgw_A 12 PWGFRLQGGKDF----NMPLTISRITPGSKAAQSQLSQ-----------GDLVVAIDGVNTDTMTHLEAQNKIKS--ASY 74 (85)
T ss_dssp CCCEEECCCGGG----TSCCBEEEECTTSHHHHSSCCC-----------CSBEEEETTEECTTCCHHHHHHHHTT--CSS
T ss_pred ccCEEEEeccCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHc--CCC
Confidence 467777532211 1589999999999999999999 999999999999987 677766654 456
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
++.++|.|+++
T Consensus 75 ~v~l~v~R~~~ 85 (85)
T 1rgw_A 75 NLSLTLQKSKR 85 (85)
T ss_dssp CEEEEEESCCC
T ss_pred eEEEEEEeCCC
Confidence 79999999874
No 177
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4.5e-09 Score=88.44 Aligned_cols=74 Identities=23% Similarity=0.380 Sum_probs=61.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+..... ...|++|..|.+++||+++| |++ ||+|++|||++|. ++.++.++|.....|
T Consensus 31 glG~~~~~g~~----~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 95 (123)
T 1ueq_A 31 GFGFTIIGGDE----PDEFLQVKSVIPDGPAAQDGKMET-----------GDVIVYINEVCVLGHTHADVVKLFQSVPIG 95 (123)
T ss_dssp SCSEEEECCSS----SSCCCEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred ceeEEEecccC----CCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 46666653211 12579999999999999999 999 9999999999998 678999999886679
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
++++|+|.|++.
T Consensus 96 ~~v~l~v~R~~~ 107 (123)
T 1ueq_A 96 QSVNLVLCRGYP 107 (123)
T ss_dssp CEEEEEEEESCC
T ss_pred CeEEEEEEeCCC
Confidence 999999999874
No 178
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.88 E-value=3.6e-09 Score=83.42 Aligned_cols=71 Identities=28% Similarity=0.369 Sum_probs=57.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+..... ..|++|..+ +++||+ +||++ ||+|++|||++|.++ +++.+++....+|+
T Consensus 15 g~G~~~~~~~~-----~~~~~v~~v-~~spA~-aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 15 GFGFTIADSPG-----GGGQRVKQI-VDSPRS-RGLKE-----------GDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp BSSCEEEECTT-----SSSEEEEEC-CC--CC-TTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred ceeEEEEecCC-----CCcEEEEEe-cCChhH-hCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 57887764321 158888887 999999 99999 999999999999987 89988888666899
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
++.++|.|+|+
T Consensus 77 ~v~l~v~R~g~ 87 (88)
T 3bpu_A 77 EVTLLVQRQTR 87 (88)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEeCCc
Confidence 99999999875
No 179
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.88 E-value=3.1e-09 Score=87.03 Aligned_cols=79 Identities=20% Similarity=0.323 Sum_probs=62.2
Q ss_pred eecceeeecchhhhhc--CccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~--g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g 409 (436)
..+|+.+........+ +..|++|..|.+++||+ +||++ ||+|++|||++|.++.++...+....+|
T Consensus 19 ~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g 86 (107)
T 2h2b_A 19 FGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQE-----------NDRVAMVNGVSMDNVEHAFAVQQLRKSG 86 (107)
T ss_dssp TBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCccHHHHHHHhhCCC
Confidence 3577777642211111 23699999999999999 99999 9999999999999998887766554678
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
++++++|.|+++.
T Consensus 87 ~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 87 KNAKITIRRKKGG 99 (107)
T ss_dssp SEEEEEEEEESCC
T ss_pred CEEEEEEEECCCC
Confidence 9999999998864
No 180
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.88 E-value=4.9e-10 Score=93.82 Aligned_cols=63 Identities=16% Similarity=0.266 Sum_probs=58.2
Q ss_pred cceEEEecCC--CCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEE
Q 013804 350 SGVLVLDAPP--NGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKI 425 (436)
Q Consensus 350 ~gv~V~~v~~--~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~ 425 (436)
.|++|..|.+ ++||+++||++ ||+|++|||++|.++ +|+.+++... |+++.|+|.|+|+..++
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL~~-----------GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAIHP-----------GDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHCCT-----------TCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEEECSSCCCC
T ss_pred CcEEEEEecCCCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEEECCEEEee
Confidence 6999999999 99999999999 999999999999999 9999999874 88999999999987543
No 181
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.87 E-value=2.1e-09 Score=85.16 Aligned_cols=71 Identities=24% Similarity=0.377 Sum_probs=60.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+..... ..|++|..|.+++||+++||++ ||+|++|||++|.++ +++.+++... |+
T Consensus 16 g~G~~~~~~~~-----~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~ 77 (90)
T 2he4_A 16 GYGFNLHSDKS-----RPGQYIRSVDPGSPAARSGLRA-----------QDRLIEVNGQNVEGLRHAEVVASIKAR--ED 77 (90)
T ss_dssp BCCEEEEECSS-----SSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--SS
T ss_pred CccEEEEccCC-----CCCEEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 46777654321 2589999999999999999999 999999999999998 8999998873 89
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
++.|+|.|++.
T Consensus 78 ~v~l~v~r~~~ 88 (90)
T 2he4_A 78 EARLLVVGPST 88 (90)
T ss_dssp EEEEEEECCCC
T ss_pred cEEEEEEccCC
Confidence 99999999764
No 182
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=2.1e-09 Score=90.89 Aligned_cols=59 Identities=22% Similarity=0.397 Sum_probs=55.4
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~ 419 (436)
.+++|..|.+++||+++| |++ ||+|++|||++|. +++|+.++|....+|++|+|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQP-----------GDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCT-----------TCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 478999999999999999 999 9999999999995 8999999999877899999999998
No 183
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.87 E-value=4.5e-09 Score=84.48 Aligned_cols=73 Identities=19% Similarity=0.363 Sum_probs=60.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+..... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++. ..|
T Consensus 17 ~lG~~i~~~~~----~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~--~~g 79 (97)
T 1n7e_A 17 PLGITISGTEE----PFDPIIISSLTKGGLAERTGAIHI-----------GDRILAINSSSLKGKPLSEAIHLLQ--MAG 79 (97)
T ss_dssp CCCEEEECCSS----TTSCCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCC
T ss_pred CcCEEEEcccC----CCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 47887764321 12589999999999999999 999 99999999999974 688888887 378
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.|+|.|+++.
T Consensus 80 ~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 80 ETVTLKIKKQTDA 92 (97)
T ss_dssp SEEEEEEECCCCC
T ss_pred CeEEEEEEeCCCC
Confidence 9999999998864
No 184
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.86 E-value=8.9e-10 Score=88.79 Aligned_cols=73 Identities=22% Similarity=0.343 Sum_probs=62.4
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+.... +..|++|..|.++|||+++||++ ||+|++|||++|.+ ++++.+++... +|+
T Consensus 21 g~G~~~~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 83 (98)
T 2jxo_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDE 83 (98)
T ss_dssp CCCEEEECCC-----SSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-TTE
T ss_pred cccEEEEecC-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCc
Confidence 4777775432 12589999999999999999999 99999999999999 99999999885 788
Q ss_pred EEEEEEEECCEE
Q 013804 411 EVIVEVLRGDQK 422 (436)
Q Consensus 411 ~v~l~v~R~g~~ 422 (436)
.+.++|.|+|+.
T Consensus 84 ~~~l~v~R~g~~ 95 (98)
T 2jxo_A 84 TKLLVVDRETDE 95 (98)
T ss_dssp EEEEECCHHHHH
T ss_pred EEEEEEECCchh
Confidence 888999998753
No 185
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.86 E-value=1.7e-09 Score=99.73 Aligned_cols=69 Identities=26% Similarity=0.349 Sum_probs=60.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCC-cEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILG-DIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 428 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~G-DiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 428 (436)
.|++|.+|.++|||+++||++ | |+|++|||++|.++.++...+....+|++++++|.|+++..+.+++
T Consensus 16 ~G~~V~~V~~~SpA~~AGL~~-----------G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~ 84 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGLEP-----------FFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETS 84 (209)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEE
T ss_pred CEEEEEEECCCCHHHHCCCCc-----------CCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEE
Confidence 799999999999999999999 9 9999999999999999887776667899999999997644444444
Q ss_pred e
Q 013804 429 L 429 (436)
Q Consensus 429 ~ 429 (436)
+
T Consensus 85 l 85 (209)
T 3rle_A 85 V 85 (209)
T ss_dssp E
T ss_pred E
Confidence 4
No 186
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=2e-09 Score=89.74 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=64.3
Q ss_pred ceecceecceeeecchhhh-hcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHH
Q 013804 327 GKVTRPILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRI 402 (436)
Q Consensus 327 g~v~~~~lGv~~~~~~~~~-~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~ 402 (436)
++.....+|+.+....... .-+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..+
T Consensus 25 ~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~ 93 (117)
T 1ujd_A 25 HTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLME-----------GMQVLEWNGIPLTSKTYEEVQSI 93 (117)
T ss_dssp SCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHH
T ss_pred cCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHH
Confidence 3344467888886422110 1112589999999999999999 999 99999999999976 6788888
Q ss_pred HhcCCCCCEEEEEEEECCEE
Q 013804 403 LDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 403 l~~~~~g~~v~l~v~R~g~~ 422 (436)
+.. .++.++|+|.|+++.
T Consensus 94 l~~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 94 ISQ--QSGEAEICVRLDLNM 111 (117)
T ss_dssp HSC--CSSCEEEEEESSCCC
T ss_pred Hhc--CCCEEEEEEEECCcc
Confidence 876 678899999998764
No 187
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.86 E-value=4.7e-09 Score=84.41 Aligned_cols=77 Identities=23% Similarity=0.365 Sum_probs=61.0
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 15 ~~lG~~l~~~~~~---~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 78 (98)
T 2opg_A 15 TGLGLSIVGGSDT---LLGAIIIHEVYEEGAACKDGRLWA-----------GDQILEVNGIDLRKATHDEAINVLRQ--T 78 (98)
T ss_dssp TBTCEEEEECTTS---TTCSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--C
T ss_pred CcccEEEecCCCC---CCCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3578887642211 12589999999999999999 999 99999999999988 4677777765 4
Q ss_pred CCEEEEEEEECCEEEE
Q 013804 409 GDEVIVEVLRGDQKEK 424 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~ 424 (436)
++++.++|.|+++..+
T Consensus 79 ~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 79 PQRVRLTLYRDEAPYK 94 (98)
T ss_dssp CSEEEEEEEECSSCCC
T ss_pred CCeEEEEEEcCCCCCc
Confidence 5899999999887543
No 188
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.9e-09 Score=87.75 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=61.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..+++|..|.+++||+++| |++ ||+|++|||++|.+ +.++.+++....+
T Consensus 20 ~g~G~~i~~g~~~----~~~~~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 84 (103)
T 1uep_A 20 SGFGFRILGGDEP----GQPILIGAVIAMGSADRDGRLHP-----------GDELVYVDGIPVAGKTHRYVIDLMHHAAR 84 (103)
T ss_dssp SSCCEEECCCCST----TSCCBEEEECTTSTTGGGTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred CccCEEEeeecCC----CCCeEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3578887642110 1689999999999999999 999 99999999999965 8899988887544
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|++|+|+|.|+++
T Consensus 85 g~~v~l~v~R~~~ 97 (103)
T 1uep_A 85 NGQVNLTVRRKVL 97 (103)
T ss_dssp HTEEEEEEEEECC
T ss_pred CCcEEEEEEeCCC
Confidence 8999999999865
No 189
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.1e-09 Score=88.81 Aligned_cols=75 Identities=23% Similarity=0.271 Sum_probs=60.7
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCE
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDE 411 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~ 411 (436)
..+|+.+..... ...|++|..|.+++||+++||++ ||+|++|||++|.++.+. +++...+.+++
T Consensus 21 ~~lG~~~~~~~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~-~~~~~~~~~~~ 84 (101)
T 1uez_A 21 EGLGFSIRGGSE----HGVGIYVSLVEPGSLAEKEGLRV-----------GDQILRVNDKSLARVTHA-EAVKALKGSKK 84 (101)
T ss_dssp TCSSEEEEECTT----TTCCEEEEEECTTSHHHHHTCCS-----------SCCEEEETTEECSSCCHH-HHHHHSSSSSS
T ss_pred CcccEEEeCCCC----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHH-HHHHhhcCCCe
Confidence 457887764321 11689999999999999999999 999999999999999884 45555566788
Q ss_pred EEEEEEECCEE
Q 013804 412 VIVEVLRGDQK 422 (436)
Q Consensus 412 v~l~v~R~g~~ 422 (436)
+.|+|.|+|+.
T Consensus 85 v~l~v~R~g~~ 95 (101)
T 1uez_A 85 LVLSVYSAGRI 95 (101)
T ss_dssp CCEEECCCCCC
T ss_pred EEEEEEECCcc
Confidence 99999998864
No 190
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=7.2e-09 Score=82.28 Aligned_cols=70 Identities=27% Similarity=0.318 Sum_probs=56.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+... .|++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .++
T Consensus 15 g~G~~l~~~--------~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~ 73 (91)
T 2f5y_A 15 GFGFTICCD--------SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPS 73 (91)
T ss_dssp BTSEEEECS--------SSCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CSS
T ss_pred CccEEEecC--------CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 356666432 479999999999999999999 99999999999995 5788887765 467
Q ss_pred EEEEEEEECCEEE
Q 013804 411 EVIVEVLRGDQKE 423 (436)
Q Consensus 411 ~v~l~v~R~g~~~ 423 (436)
++.++|.|++...
T Consensus 74 ~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 74 EIILLVWRMVPQV 86 (91)
T ss_dssp EEEEEEEECC---
T ss_pred eEEEEEEeCCCCC
Confidence 8999999987654
No 191
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.85 E-value=3e-09 Score=86.75 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=61.4
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.++|+.+...... ..|++|..|.+++||+++||++ ||+|++|||++|.+ ++++.+++.. |
T Consensus 27 ~~lG~~~~~~~~~----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~---~ 88 (104)
T 1wi2_A 27 AQLGFNIRGGKAS----QLGIFISKVIPDSDAHRAGLQE-----------GDQVLAVNDVDFQDIEHSKAVEILKT---A 88 (104)
T ss_dssp CCCSEEEECCSSS----CCCCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH---S
T ss_pred CCccEEEEcccCC----CCCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC---C
Confidence 5789988753211 1689999999999999999999 99999999999999 9999988876 6
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+++.|+|.|+..
T Consensus 89 ~~v~l~v~r~~~ 100 (104)
T 1wi2_A 89 REISMRVRFFSG 100 (104)
T ss_dssp SSEEEEEECCCC
T ss_pred CEEEEEEEECCC
Confidence 789999998754
No 192
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.85 E-value=3.1e-09 Score=85.70 Aligned_cols=60 Identities=27% Similarity=0.411 Sum_probs=54.8
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.++|||+++||++ ||+|++|||++|. ++.++..++.. +|+++.|+|.|+++.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRA-----------GDLITHINGESVLGLVHMDVVELLLK--SGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCEEEEEEEECCCc
Confidence 488999999999999999999 9999999999999 88999988884 789999999997753
No 193
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=3.1e-09 Score=84.92 Aligned_cols=72 Identities=17% Similarity=0.257 Sum_probs=57.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... ..+++|..|.+++||+++||++ ||+|++|||++|.++ .++...+.. .|+
T Consensus 19 ~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~ 81 (94)
T 2eeg_A 19 PWGFRLVGGRDF----SAPLTISRVHAGSKAALAALCP-----------GDLIQAINGESTELMTHLEAQNRIKG--CHD 81 (94)
T ss_dssp CCSCCEECCTTT----TSCCEECCCCSSSHHHHTTCCT-----------TCEEEEETTEETTTCCHHHHHHHHHT--CCS
T ss_pred ccCEEEECccCC----CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 467777542111 1589999999999999999999 999999999999985 566666654 678
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
++.|+|.|+++
T Consensus 82 ~v~l~v~R~g~ 92 (94)
T 2eeg_A 82 HLTLSVSSGPS 92 (94)
T ss_dssp CEEEEEECCSS
T ss_pred eEEEEEEeCCC
Confidence 89999999875
No 194
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=3.7e-09 Score=84.12 Aligned_cols=70 Identities=30% Similarity=0.501 Sum_probs=60.9
Q ss_pred ceecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe-CCHHHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV-SNGSDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V-~s~~dl~~~l~~~~~ 408 (436)
..+||+.+.... .|++|..|.+++||+++| |++ ||+|++|||++| .+++|+.+++.. .
T Consensus 17 ~~~lG~~i~~~~-------~~v~V~~V~~~spA~~ag~L~~-----------GD~I~~ing~~v~~~~~~~~~~l~~--~ 76 (91)
T 2e7k_A 17 GEHLGVTFRVEG-------GELVIARILHGGMVAQQGLLHV-----------GDIIKEVNGQPVGSDPRALQELLRN--A 76 (91)
T ss_dssp TCCCCEEEEESS-------SSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCHHHHHHHHHT--C
T ss_pred CCcEeEEEEecC-------CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCHHHHHHHHHc--C
Confidence 367899987632 689999999999999987 999 999999999999 999999999987 3
Q ss_pred CCEEEEEEEECC
Q 013804 409 GDEVIVEVLRGD 420 (436)
Q Consensus 409 g~~v~l~v~R~g 420 (436)
++++.|+|.|..
T Consensus 77 ~~~v~l~v~~~~ 88 (91)
T 2e7k_A 77 SGSVILKILSGP 88 (91)
T ss_dssp CSSBCEEEECCS
T ss_pred CCeEEEEEEECC
Confidence 678999998753
No 195
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.84 E-value=4.8e-09 Score=83.97 Aligned_cols=77 Identities=23% Similarity=0.378 Sum_probs=60.1
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~ 408 (436)
..+|+.+........-...|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .
T Consensus 15 ~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (97)
T 2iwn_A 15 QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQI-----------GDQIIAVDGTNLQGFTNQQAVEVLRH--T 81 (97)
T ss_dssp TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--C
T ss_pred CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 458888875321111123699999999999999999 999 999999999999965 566666654 7
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|+++.|+|.|+|+
T Consensus 82 ~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 82 GQTVLLTLMRRGE 94 (97)
T ss_dssp CSEEEEEEEEEEE
T ss_pred CCeEEEEEEeCCC
Confidence 8999999999875
No 196
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=6.2e-09 Score=82.23 Aligned_cols=71 Identities=20% Similarity=0.337 Sum_probs=61.0
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+.... ..+++|..|.+++||++ +||++ ||+|++|||++|. +++|+.+++... +
T Consensus 13 ~~lG~~i~~~~------~~~~~I~~V~~gspA~~~agL~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~-~ 74 (88)
T 1kwa_A 13 EPMGITLKMNE------LNHCIVARIMHGGMIHRQGTLHV-----------GDEIREINGISVANQTVEQLQKMLREM-R 74 (88)
T ss_dssp SCCCEEEECSC------GGGEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEEGGGSCHHHHHHHHHHC-C
T ss_pred CceeEEEEeCC------CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcC-C
Confidence 35788887532 15799999999999999 88999 9999999999999 999999999884 4
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
+ +++|+|.|.++
T Consensus 75 ~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 75 G-SITFKIVPSYR 86 (88)
T ss_dssp E-EEEEEEECCCC
T ss_pred C-cEEEEEECCcC
Confidence 5 89999999765
No 197
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.84 E-value=6.2e-09 Score=85.25 Aligned_cols=68 Identities=24% Similarity=0.323 Sum_probs=56.8
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE-EEEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ-KEKI 425 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~-~~~~ 425 (436)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .++++.|+|.|+++ ...+
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~~~ 98 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLKVAKPGSGEKIM 98 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEEEECCSSSCSEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCCCeEE
Confidence 689999999999999999 999 99999999999965 6777777765 57799999999875 3445
Q ss_pred EEEee
Q 013804 426 PVKLE 430 (436)
Q Consensus 426 ~v~~~ 430 (436)
++++.
T Consensus 99 ~v~l~ 103 (106)
T 4amh_A 99 EIKLI 103 (106)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55554
No 198
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.83 E-value=4.4e-09 Score=88.59 Aligned_cols=78 Identities=23% Similarity=0.380 Sum_probs=62.0
Q ss_pred ceecceeeecch--hhhhcC---ccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHH
Q 013804 331 RPILGIKFAPDQ--SVEQLG---VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRI 402 (436)
Q Consensus 331 ~~~lGv~~~~~~--~~~~~g---~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~ 402 (436)
++++|+.+.... ..+.++ ..|++|..|.++|||+++| |++ ||+|++|||++|.+ ++++.++
T Consensus 35 ~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 35 SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHH
T ss_pred CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHH
Confidence 468999887421 112112 2699999999999999999 999 99999999999998 9999999
Q ss_pred HhcCCCCCEEEEEEEECCE
Q 013804 403 LDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 403 l~~~~~g~~v~l~v~R~g~ 421 (436)
+... +++++|+|.|...
T Consensus 104 l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHC--CSSEEEEEECCCC
T ss_pred HHcC--CCeEEEEEEECCc
Confidence 9873 4589999998654
No 199
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.83 E-value=3.6e-09 Score=83.75 Aligned_cols=73 Identities=22% Similarity=0.282 Sum_probs=59.1
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..+++|..|.+++||+++| |++ ||+|++|||++| .++.++..++.....+
T Consensus 14 g~G~~~~~g~~~----~~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 14 GFGFRILGGNEP----GEPIYIGHIVPLGAADTDGRLRS-----------GDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp BCCEEEEECSST----TSCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred ccCEEEEccccC----CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 477777532111 1579999999999999999 999 999999999999 5688999888875445
Q ss_pred CEEEEEEEECC
Q 013804 410 DEVIVEVLRGD 420 (436)
Q Consensus 410 ~~v~l~v~R~g 420 (436)
++++|+|.|++
T Consensus 79 ~~v~l~v~R~~ 89 (90)
T 2q9v_A 79 GHVNLTVRQTR 89 (90)
T ss_dssp TEEEEEEEECC
T ss_pred CeEEEEEEecc
Confidence 68999999864
No 200
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.83 E-value=6.3e-09 Score=84.37 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=61.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~ 408 (436)
.+||+.+...... ....+++|..|.+++||++ +||++ ||+|++|||++| .+++|+.++|...++
T Consensus 21 ~~lG~~i~~~~~~--~~~~~~~V~~V~~~spA~~~ggl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 21 EGLGVALVESGWG--SLLPTAVIANLLHGGPAERSGALSI-----------GDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCCEEEEECCCS--SSSCCEEEEEECTTSTTGGGSSCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CccCEEEEeCCCC--CCccCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4788888642210 0124799999999999999 66999 999999999999 899999999998668
Q ss_pred CCEEEEEEEEC
Q 013804 409 GDEVIVEVLRG 419 (436)
Q Consensus 409 g~~v~l~v~R~ 419 (436)
|++++|+|.|.
T Consensus 88 g~~v~l~v~R~ 98 (101)
T 2yt7_A 88 QTSVTLSIVHC 98 (101)
T ss_dssp SSEEEEEECCC
T ss_pred CCeEEEEEEeC
Confidence 89999999884
No 201
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=5.4e-09 Score=86.61 Aligned_cols=70 Identities=19% Similarity=0.372 Sum_probs=59.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCc-ccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl-~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+.... .|++|..|.+++||+++|| ++ ||+|++|||++|. +++++..++... +
T Consensus 38 ~lG~~i~~~~-------~gv~V~~V~~~spA~~aGll~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~ 97 (113)
T 1va8_A 38 PLGATVRNEM-------DSVIISRIVKGGAAEKSGLLHE-----------GDEVLEINGIEIRGKDVNEVFDLLSDM--H 97 (113)
T ss_dssp CCCEEEEECS-------SSEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--C
T ss_pred ceeEEEEeCC-------CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--C
Confidence 5677765432 6899999999999999999 99 9999999999999 688999998763 4
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.|+|.|+++.
T Consensus 98 ~~v~l~v~r~~~~ 110 (113)
T 1va8_A 98 GTLTFVLIPSSGP 110 (113)
T ss_dssp EEEEEEEECCCCC
T ss_pred CeEEEEEEECCcc
Confidence 6899999998864
No 202
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.82 E-value=7.3e-09 Score=82.74 Aligned_cols=72 Identities=26% Similarity=0.443 Sum_probs=57.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
.+|+.+..... ..|++|..|.+++||+++||++ ||+|++|||++|.++ +++..++.. .++
T Consensus 17 ~~G~~l~~~~~-----~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~ 78 (95)
T 3r68_A 17 GYGFYLRAGPE-----QKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 78 (95)
T ss_dssp BCSCEEEEC-------CCSEEEECCCTTSHHHHHTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTT
T ss_pred cccEEEEecCC-----CCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCC
Confidence 57777764321 1489999999999999999999 999999999999998 899998887 467
Q ss_pred EEEEEEEECCEE
Q 013804 411 EVIVEVLRGDQK 422 (436)
Q Consensus 411 ~v~l~v~R~g~~ 422 (436)
++.+.+.|.+..
T Consensus 79 ~~~~~~~r~~~~ 90 (95)
T 3r68_A 79 QTTLLVLDKELE 90 (95)
T ss_dssp EEEEEEEECC--
T ss_pred eEEEEEECCccc
Confidence 777877776554
No 203
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=6.6e-09 Score=86.94 Aligned_cols=99 Identities=27% Similarity=0.230 Sum_probs=71.3
Q ss_pred Ccceeeeeeeccchhhhhccccceecceecceeeecchhhh-hcCccceEEEecCCCCcccccC-cccccccccCcccCC
Q 013804 305 SGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILG 382 (436)
Q Consensus 305 ~~~~~aIP~~~i~~~l~~l~~~g~v~~~~lGv~~~~~~~~~-~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~G 382 (436)
...+++.|....+.+. |.+.. ..+|+.+....... ..+..|++|..|.+++||+++| |++ |
T Consensus 7 ~~~g~~~~~~~~~~v~--l~r~~----~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------G 69 (120)
T 2eno_A 7 GMNGRVDYLVTEEEIN--LTRGP----SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQE-----------G 69 (120)
T ss_dssp CCSSCCCEEEEEEEEE--EECCS----SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCT-----------T
T ss_pred CcCCCCCCCCceEEEE--EEECC----CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCC-----------C
Confidence 3445566655555443 22221 57888887532110 1123699999999999999999 999 9
Q ss_pred cEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 383 DIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 383 DiIl~vnG~~V~s~~--dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
|+|++|||++|.++. ++..++.. .|++++|+|.|+++.
T Consensus 70 D~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 70 DKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp CEEEEETTEECCSCCHHHHHHHHHH--HCSEEEEEEEEEEEC
T ss_pred CEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 999999999999854 77777765 478999999998764
No 204
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.81 E-value=3.2e-08 Score=83.90 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=61.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCC-------CCeEEEEEcCCC---C
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (436)
...|+|.+|+++ +|||+|||+.+ ....|+++. ++.+.++-+..|+. +||||||++.+. .
T Consensus 24 ~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (131)
T 1yph_C 24 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 101 (131)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCC
Confidence 468999999987 99999999976 445566532 23455655555543 599999998764 3
Q ss_pred CCcceecCCCC-CCCCCCEEEEEecCC
Q 013804 212 KLRPIPIGVSA-DLLVGQKVYAIGNPF 237 (436)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~ 237 (436)
.+.|+.|.... .+..|+.+++.||..
T Consensus 102 ~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 102 TVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cCcceECCCcccCCCCCCEEEEEcCCc
Confidence 46778786543 356899999999874
No 205
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=5.3e-09 Score=86.72 Aligned_cols=77 Identities=21% Similarity=0.318 Sum_probs=61.6
Q ss_pred ecceeeecchhhhhcCc---cceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcC
Q 013804 333 ILGIKFAPDQSVEQLGV---SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC 406 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~---~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~ 406 (436)
.+|+.+.........+. .+++|..|.+++||++ +||++ ||+|++|||++|.+ ++++.+++..
T Consensus 23 ~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~- 90 (114)
T 1uew_A 23 GFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKV-----------GDRILAVNGQSIINMPHADIVKLIKD- 90 (114)
T ss_dssp CCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCT-----------TCBEEEETTBCTTTSCHHHHHHHHHH-
T ss_pred CCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 46666654221111121 3679999999999999 99999 99999999999999 6999999987
Q ss_pred CCCCEEEEEEEECCEE
Q 013804 407 KVGDEVIVEVLRGDQK 422 (436)
Q Consensus 407 ~~g~~v~l~v~R~g~~ 422 (436)
.|+.+.|+|.|+++.
T Consensus 91 -~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 91 -AGLSVTLRIIPQEEL 105 (114)
T ss_dssp -TTTEEEEEECCCSCC
T ss_pred -CCCeEEEEEEeCCcC
Confidence 789999999998864
No 206
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.80 E-value=3.2e-09 Score=90.04 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=64.8
Q ss_pred eecceeeecchhhhhc-CccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVEQL-GVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~-g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
..||+.+........+ ...|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++.+++..
T Consensus 27 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 93 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQV-----------NDKIVAVDGVNIQGFANHDVVEVLRN-- 93 (129)
T ss_dssp CCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCS-----------SCBEEEETTBCCTTCCHHHHHHHHHH--
T ss_pred CCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 4577777642211111 23799999999999999999 999 99999999999999 9999999987
Q ss_pred CCCEEEEEEEECCEEEE
Q 013804 408 VGDEVIVEVLRGDQKEK 424 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~~~ 424 (436)
.|+.+.|+|.|+++.++
T Consensus 94 ~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 94 AGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp CCSSEEEEEEEESSSSS
T ss_pred CCCeEEEEEEeCCcccc
Confidence 78899999999887543
No 207
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.80 E-value=7.8e-09 Score=94.02 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=65.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+.........+..+++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++....+
T Consensus 18 ~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 18 TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp TBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCS-----------SCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred CccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 457777765322112233689999999999999999 999 9999999999999 68999999998767
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|++++++|.|+++
T Consensus 87 g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 87 TSKVTLEIEFDVA 99 (196)
T ss_dssp SSEEEEEEEECSC
T ss_pred CCeEEEEEEecCC
Confidence 9999999999985
No 208
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.80 E-value=4.4e-10 Score=93.31 Aligned_cols=66 Identities=33% Similarity=0.493 Sum_probs=58.2
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 427 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (436)
.|++|..|.++|||+++||++ ||+|++|||++|.++ .++.+++.. .|+++.|+|.|+++..++++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCT-----------TCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCcceehhh
Confidence 689999999999999999999 999999999999984 888888876 48999999999887655544
Q ss_pred E
Q 013804 428 K 428 (436)
Q Consensus 428 ~ 428 (436)
+
T Consensus 105 ~ 105 (114)
T 2edz_A 105 N 105 (114)
T ss_dssp H
T ss_pred c
Confidence 3
No 209
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=7.7e-10 Score=91.15 Aligned_cols=84 Identities=23% Similarity=0.328 Sum_probs=64.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .|
T Consensus 20 glG~~l~~g~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 85 (110)
T 1um1_A 20 GLGMGLIDGMHT-HLGAPGLYIQTLLPGSPAAADGRLSL-----------GDRILEVNGSSLLGLGYLRAVDLIRH--GG 85 (110)
T ss_dssp CCCEEEEETTTS-TTCCSSEEEEEECTTSHHHHHSCCCT-----------TCEEEEESSCBCSSCCHHHHHHHHHT--CC
T ss_pred ccCEEEeCCcCC-CCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 477777542211 1123689999999999999999 999 99999999999974 6677766665 58
Q ss_pred CEEEEEEEECCEEEEEEEEee
Q 013804 410 DEVIVEVLRGDQKEKIPVKLE 430 (436)
Q Consensus 410 ~~v~l~v~R~g~~~~~~v~~~ 430 (436)
+++.|+|.|+++.+++++++.
T Consensus 86 ~~v~l~v~R~~~~~~~~v~~~ 106 (110)
T 1um1_A 86 KKMRFLVAKSDVETAKKIHSG 106 (110)
T ss_dssp SEEEEEEECCCHHHHHHHSSC
T ss_pred CeEEEEEEeCCcceeEEEEec
Confidence 999999999998766655543
No 210
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.79 E-value=1.3e-08 Score=84.10 Aligned_cols=73 Identities=25% Similarity=0.408 Sum_probs=59.2
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++...+.. .|
T Consensus 36 glG~~l~~~~~~----~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g 98 (112)
T 2r4h_A 36 GFGFSLRGGREY----NMDLYVLRLAEDGPAERSGKMRI-----------GDEILEINGETTKNMKHSRAIELIKN--GG 98 (112)
T ss_dssp BTSEEEEECGGG----TCCEEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TT
T ss_pred ccCEEEeccccC----CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 478887643211 2689999999999999999 999 99999999999976 4677766665 68
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
++++|+|.|+++.
T Consensus 99 ~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 99 RRVRLFLKRGETS 111 (112)
T ss_dssp TEEEEEEECCEEE
T ss_pred CeEEEEEEeCCcc
Confidence 8999999998764
No 211
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.79 E-value=6.9e-09 Score=84.17 Aligned_cols=72 Identities=26% Similarity=0.458 Sum_probs=60.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+.... ...|++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .|+
T Consensus 18 g~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~ 79 (102)
T 2d90_A 18 GYGFYLRAGP-----EQKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 79 (102)
T ss_dssp SSSCEEEECS-----SSSSEEEECCCTTSTTTTTTCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHH--STT
T ss_pred CccEEEEeec-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 4777776421 12689999999999999999999 99999999999998 4788888876 488
Q ss_pred EEEEEEEECCEE
Q 013804 411 EVIVEVLRGDQK 422 (436)
Q Consensus 411 ~v~l~v~R~g~~ 422 (436)
++.|+|.|+++.
T Consensus 80 ~v~l~v~r~~~~ 91 (102)
T 2d90_A 80 QTTLLVLDKEAE 91 (102)
T ss_dssp EEEEEECSTTCC
T ss_pred EEEEEEEECCCc
Confidence 999999987654
No 212
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.79 E-value=5.9e-09 Score=84.03 Aligned_cols=68 Identities=22% Similarity=0.341 Sum_probs=58.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.||+.+..... .|++|..|.+++||+++| |++ ||+|++|||++|.+ ++|+.+++... +
T Consensus 25 ~lG~~l~~~~~------~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~~--~ 85 (97)
T 2ejy_A 25 PMGICLKLNEK------QSCTVARILHGGMIHRQGSLHV-----------GDEILEINGTNVTNHSVDQLQKAMKET--K 85 (97)
T ss_dssp CCSEEEEECTT------CCEEEEEECSSSHHHHHTCCCT-----------TCEEEEETTBCCCSSCSHHHHHHHHHC--C
T ss_pred CeeEEEEeCCC------CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--C
Confidence 57887764221 589999999999999999 999 99999999999995 99999999873 6
Q ss_pred CEEEEEEEEC
Q 013804 410 DEVIVEVLRG 419 (436)
Q Consensus 410 ~~v~l~v~R~ 419 (436)
++++|+|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 7899988865
No 213
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=1.3e-08 Score=81.71 Aligned_cols=70 Identities=29% Similarity=0.470 Sum_probs=57.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~ 410 (436)
-+|+.+.... .|++|..+.+ +|+++||++ ||+|++|||++|.++ +|+.++|....+|+
T Consensus 22 g~G~~i~~~~-------~Gv~V~~v~~--~a~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 81 (96)
T 1ujv_A 22 GFGFTIADSP-------TGQRVKQILD--IQGCPGLCE-----------GDLIVEINQQNVQNLSHTEVVDILKDCPIGS 81 (96)
T ss_dssp SSSEEEEEET-------TEEEEEEESC--GGGSTTCCS-----------SCEEEEETTEECSSCCHHHHHHHHHHSCTTS
T ss_pred ceeEEEEcCC-------CCEEEEEEec--ccccCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 4677765322 4899999987 378999999 999999999999874 89999999866699
Q ss_pred EEEEEEEECCEE
Q 013804 411 EVIVEVLRGDQK 422 (436)
Q Consensus 411 ~v~l~v~R~g~~ 422 (436)
++.|+|.|+++.
T Consensus 82 ~v~l~v~R~g~~ 93 (96)
T 1ujv_A 82 ETSLIIHRGSGP 93 (96)
T ss_dssp EEEEEEECCSSC
T ss_pred EEEEEEEECCCC
Confidence 999999998763
No 214
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.79 E-value=3.8e-09 Score=86.33 Aligned_cols=60 Identities=33% Similarity=0.519 Sum_probs=54.3
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~--dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.++|||+++||++ ||+|++|||++|.++. ++..++.. .|++++++|.|+++.
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSY 87 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH--TTTEEEEEEECHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECCee
Confidence 589999999999999999999 9999999999999886 88888874 688999999998754
No 215
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=8.8e-09 Score=85.94 Aligned_cols=76 Identities=26% Similarity=0.347 Sum_probs=60.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+....... .+..|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .+
T Consensus 37 glGf~l~~g~~~~-~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~ 102 (117)
T 2fne_A 37 GLGFSIVGGYGSP-HGDLPIYVKTVFAKGAASEDGRLKR-----------GDQIIAVNGQSLEGVTHEEAVAILKR--TK 102 (117)
T ss_dssp BTSEEEEEEEEET-TEEEEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred cccEEEecccCCC-CCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 4777776421100 112689999999999999999 999 9999999999999 88899888876 34
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
++++|+|.|+|+.
T Consensus 103 ~~v~l~v~R~g~~ 115 (117)
T 2fne_A 103 GTVTLMVLSSDET 115 (117)
T ss_dssp SSEEEEEEECSCE
T ss_pred CeEEEEEEeCCcc
Confidence 5699999999875
No 216
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.77 E-value=1.2e-08 Score=81.60 Aligned_cols=76 Identities=24% Similarity=0.377 Sum_probs=60.0
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+...... .....|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .
T Consensus 16 ~~lG~~i~~g~~~-~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~ 81 (96)
T 1d5g_A 16 NSLGISVTGGVNT-SVRHGGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--T 81 (96)
T ss_dssp SSCCEEEECCSSS-CSSSSCCEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHS--C
T ss_pred CCCCEEEECCCCC-CCCcCCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 3567776532110 0112699999999999999999 999 9999999999999 66888888875 6
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|+++.++|.|++.
T Consensus 82 g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 82 GQVVHLLLEKGQS 94 (96)
T ss_dssp CSEEEEEEECCSC
T ss_pred CCeEEEEEEcCCC
Confidence 8999999999864
No 217
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.77 E-value=1.3e-08 Score=83.81 Aligned_cols=60 Identities=25% Similarity=0.210 Sum_probs=52.2
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.+++|..|.+++||+++||++ ||+|++|||++|. +++|+.+++.. ..+++++|+|.|...
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~-----------GD~Il~VnG~~v~~~~~~dv~~~i~~-~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGARE-----------GDYIVSIQLVDCKWLTLSEVMKLLKS-FGEDEIEMKVVSLLD 105 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT-TTTSCEEEEEESCC-
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEECCC
Confidence 578999999999999999999 9999999999999 66999988876 355669999988644
No 218
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.77 E-value=1.1e-08 Score=80.85 Aligned_cols=57 Identities=30% Similarity=0.462 Sum_probs=51.2
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g~~v~l~v~R~ 419 (436)
.|++|..|.+++||+++| |++ ||+|++|||+++ .+++++.+++.. .++++.|++.+.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~--~~~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHE-----------GDIILKINGTVTENMSLTDARKLIEK--SRGKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEeCC
Confidence 589999999999999999 999 999999999999 789999999987 346888888765
No 219
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.77 E-value=6.4e-09 Score=88.15 Aligned_cols=76 Identities=24% Similarity=0.360 Sum_probs=60.8
Q ss_pred ecceeeecch--hhhhcCc---cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHh
Q 013804 333 ILGIKFAPDQ--SVEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILD 404 (436)
Q Consensus 333 ~lGv~~~~~~--~~~~~g~---~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~ 404 (436)
.||+.+.... .++.+++ .|++|..|.+++||+++| |++ ||+|++|||++| .++.++..++.
T Consensus 43 ~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~ 111 (128)
T 1nf3_C 43 PLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAV-----------NDEVLEVNGIEVSGKSLDQVTDMMI 111 (128)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCT-----------TCEEEEETTEESTTCCHHHHHHHHH
T ss_pred CccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH
Confidence 4677665321 1223332 589999999999999999 899 999999999999 78999999887
Q ss_pred cCCCCCEEEEEEEECCE
Q 013804 405 QCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 405 ~~~~g~~v~l~v~R~g~ 421 (436)
. .++++.|+|.|+++
T Consensus 112 ~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 112 A--NSRNLIITVRPANQ 126 (128)
T ss_dssp H--TTTSEEEEEECCCC
T ss_pred c--CCCeEEEEEEECCc
Confidence 5 45679999999875
No 220
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.76 E-value=5.5e-09 Score=84.71 Aligned_cols=79 Identities=25% Similarity=0.263 Sum_probs=62.4
Q ss_pred eecceeeecchhhh-hcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~-~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
..+|+.+....... .-+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 15 ~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 81 (102)
T 2i1n_A 15 SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGV-----------NDCVLRVNEVDVSEVVHSRAVEALKE-- 81 (102)
T ss_dssp TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--
T ss_pred CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 35788876422110 0123699999999999999999 999 99999999999987 7778777766
Q ss_pred CCCEEEEEEEECCEEE
Q 013804 408 VGDEVIVEVLRGDQKE 423 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~~ 423 (436)
.|+++.|+|.|+++..
T Consensus 82 ~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 82 AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp SCSEEEEEEEEECCCC
T ss_pred CCCeEEEEEEeCCCCC
Confidence 6899999999988653
No 221
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.76 E-value=1.4e-08 Score=80.90 Aligned_cols=76 Identities=22% Similarity=0.289 Sum_probs=57.9
Q ss_pred ecceeeecchhh-hhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 333 ILGIKFAPDQSV-EQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 333 ~lGv~~~~~~~~-~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
.+|+.+...... ...+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 15 g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (94)
T 2fe5_A 15 GLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQI-----------GDRLLAVNNTNLQDVRHEEAVASLKN--T 81 (94)
T ss_dssp CSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHT--C
T ss_pred CCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 467776531110 01123689999999999999999 999 99999999999988 4677766665 4
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
++++.|+|.|+|+
T Consensus 82 ~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 82 SDMVYLKVAKPGS 94 (94)
T ss_dssp CSEEEEEEECCCC
T ss_pred CCeEEEEEEcCCC
Confidence 5699999999874
No 222
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.76 E-value=1.7e-08 Score=91.16 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=66.1
Q ss_pred ecceeeecchhhhh-cCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQ-LGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~-~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~ 410 (436)
.+|+.+........ .+..|++|..|.++|||+++| |++ ||+|++|||++|.++.+..........|+
T Consensus 17 ~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 85 (196)
T 3gsl_A 17 GLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKEAGS 85 (196)
T ss_dssp BSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 48888765322111 123699999999999999999 999 99999999999998876655444335789
Q ss_pred EEEEEEEECC--EEEEEEEEeec
Q 013804 411 EVIVEVLRGD--QKEKIPVKLEP 431 (436)
Q Consensus 411 ~v~l~v~R~g--~~~~~~v~~~~ 431 (436)
.+.++|.|++ ....+++.+..
T Consensus 86 ~v~l~v~r~~~~~~~~~~v~l~~ 108 (196)
T 3gsl_A 86 IVRLYVMRRKPPAEKVMEIKLIK 108 (196)
T ss_dssp EEEEEEEEECCCCEEEEEEEEEE
T ss_pred cEEEEEEecCCCccccEEEEEec
Confidence 9999999977 45555665543
No 223
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.75 E-value=9.9e-09 Score=81.31 Aligned_cols=69 Identities=22% Similarity=0.309 Sum_probs=54.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHH--HHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~d--l~~~l~~~~~g~ 410 (436)
.+|+.+..... ..|++|..|.+++||+++||++ ||+|++|||++|.++.+ +...+. ..|+
T Consensus 20 ~~G~~~~~~~~-----~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~ 81 (91)
T 1m5z_A 20 DFGFSVADGLL-----EKGVYVKNIRPAGPGDLGGLKP-----------YDRLLQVNHVRTRDFDCCLVVPLIA--ESGN 81 (91)
T ss_dssp SSSEEEEECTT-----SSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TSTT
T ss_pred CccEEEEeccC-----CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCC
Confidence 46777654221 1689999999999999999999 99999999999999753 334444 3588
Q ss_pred EEEEEEEEC
Q 013804 411 EVIVEVLRG 419 (436)
Q Consensus 411 ~v~l~v~R~ 419 (436)
++.++|.|+
T Consensus 82 ~v~l~v~R~ 90 (91)
T 1m5z_A 82 KLDLVISRN 90 (91)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 999999986
No 224
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.74 E-value=6.9e-09 Score=82.99 Aligned_cols=72 Identities=28% Similarity=0.432 Sum_probs=57.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+..... ..|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++...+.. .|
T Consensus 17 ~lG~~~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g 78 (95)
T 2vwr_A 17 QLGIKLVRRTD-----EPGVFILDLLEGGLAAQDGRLSS-----------NDRVLAINGHDLKYGTPELAAQIIQA--SG 78 (95)
T ss_dssp CCCEEEEECSS-----SCSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred cccEEEEeccC-----CCCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 46777654221 1589999999999999999 999 99999999999987 4556656654 58
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.++|.|+++.
T Consensus 79 ~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 79 ERVNLTIARPGKP 91 (95)
T ss_dssp SEEEEEEEEESCS
T ss_pred CEEEEEEEcCCcC
Confidence 9999999998753
No 225
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.74 E-value=1.1e-08 Score=82.12 Aligned_cols=68 Identities=26% Similarity=0.389 Sum_probs=53.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
.+|+.+.... .|++|.+|.+++||+++| |++ ||+|++|||++|.+. .+...++.. .+
T Consensus 21 glG~~~~~~~-------~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~~~~--~~ 80 (96)
T 2qkv_A 21 ELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVSYALFKG--AN 80 (96)
T ss_dssp CCCEEEEECS-------SSEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CS
T ss_pred CccEEEEeCC-------CcEEEEEeCCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CC
Confidence 4677765421 689999999999999999 999 999999999999863 344444443 56
Q ss_pred CEEEEEEEECC
Q 013804 410 DEVIVEVLRGD 420 (436)
Q Consensus 410 ~~v~l~v~R~g 420 (436)
+++.|+|.|..
T Consensus 81 ~~v~l~v~R~~ 91 (96)
T 2qkv_A 81 GKVSMEVTRPK 91 (96)
T ss_dssp SEEEEEEECCC
T ss_pred CcEEEEEEeCC
Confidence 78999999863
No 226
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.73 E-value=1.4e-08 Score=86.50 Aligned_cols=78 Identities=22% Similarity=0.316 Sum_probs=62.7
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..||+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++.+++....+
T Consensus 48 ~~lG~~i~gg~~~-~~~~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 115 (131)
T 1wfg_A 48 AMLGLKVVGGKMT-ESGRLCAFITKVKKGSLADTVGHLRP-----------GDEVLEWNGRLLQGATFEEVYNIILESKP 115 (131)
T ss_dssp TTTTEEEEEEEEC-SSSCEEEEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHTSS
T ss_pred CCCCEEEecCccC-CCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 3577776531110 1122589999999999999999 999 99999999999975 6899999988778
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|++|+|+|.|++.
T Consensus 116 g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 116 EPQVELVVSRSGP 128 (131)
T ss_dssp SSEEEEEEEEECS
T ss_pred CCEEEEEEEcCCC
Confidence 8999999999764
No 227
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.73 E-value=3.1e-09 Score=87.93 Aligned_cols=84 Identities=21% Similarity=0.234 Sum_probs=64.0
Q ss_pred ecceeeecch--hhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 333 ILGIKFAPDQ--SVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 333 ~lGv~~~~~~--~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
.+|+.+.... .....+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 16 glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 82 (113)
T 2g5m_B 16 GLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN-- 82 (113)
T ss_dssp CCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--
T ss_pred CCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--
Confidence 4677665410 0001123699999999999999999 999 99999999999985 6667677766
Q ss_pred CCCEEEEEEEECCEEEEEEEEe
Q 013804 408 VGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|+++.|+|.|+++..++++.+
T Consensus 83 ~g~~v~l~v~R~~~~~~~~v~p 104 (113)
T 2g5m_B 83 TKGRVRFMIGRERPGEQSEVAQ 104 (113)
T ss_dssp SCSSCEEEEEECCCCTTSSCSS
T ss_pred CCCeEEEEEEeCCCCCcchhhh
Confidence 4889999999999876655544
No 228
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.73 E-value=9.5e-09 Score=80.02 Aligned_cols=58 Identities=21% Similarity=0.314 Sum_probs=51.4
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.|++|..|.+++||+++||++ ||+|++|||++|.++ .++..++.. .+++++++|.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRA-----------GDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCT-----------TCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCC
Confidence 478999999999999999999 999999999999998 888887764 4577999999863
No 229
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=83.04 Aligned_cols=76 Identities=20% Similarity=0.327 Sum_probs=60.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... .+..+++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 22 ~g~G~~l~~~~~~--~~~~~v~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 86 (104)
T 2djt_A 22 AGFGLTLGGGRDV--AGDTPLAVRGLLKDGPAQRCGRLEV-----------GDLVLHINGESTQGLTHAQAVERIRA--G 86 (104)
T ss_dssp SSCCEEEECCEET--TEECCCEEEEECTTCHHHHHCSCCT-----------TCBEEEETTEECTTCCHHHHHHHHHH--T
T ss_pred CCccEEEEeccCC--CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 3577777642211 112689999999999999999 999 99999999999988 5677777765 5
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|+++.|+|.|+++.
T Consensus 87 g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 87 GPQLHLVIRRPLSG 100 (104)
T ss_dssp CSEEEEEECCCCCC
T ss_pred CCeEEEEEEECCCC
Confidence 89999999998764
No 230
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.7e-08 Score=84.15 Aligned_cols=77 Identities=23% Similarity=0.265 Sum_probs=61.8
Q ss_pred eecceeeecchhhh-hcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~-~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~ 407 (436)
..+|+.+....... ..+-.|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++..
T Consensus 35 ~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~-- 101 (117)
T 2byg_A 35 KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQV-----------GDRLLMVNNYSLEEVTHEEAVAILKN-- 101 (117)
T ss_dssp TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 35788876422110 1123689999999999999999 999 9999999999999 78888888875
Q ss_pred CCCEEEEEEEECCE
Q 013804 408 VGDEVIVEVLRGDQ 421 (436)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (436)
.|++|+|+|.|+++
T Consensus 102 ~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 102 TSEVVYLKVGKPTT 115 (117)
T ss_dssp CCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 48999999999865
No 231
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.72 E-value=1.9e-08 Score=85.39 Aligned_cols=61 Identities=28% Similarity=0.416 Sum_probs=55.6
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++.+++....+|++++|+|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 479999999999999999 999 99999999999984 78999999887669999999999864
No 232
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.72 E-value=1.7e-08 Score=81.68 Aligned_cols=77 Identities=29% Similarity=0.345 Sum_probs=60.2
Q ss_pred eecceeeecchhhh-hcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~-~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~ 407 (436)
..+|+.+....... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++..
T Consensus 18 ~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 84 (101)
T 2jik_A 18 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN-- 84 (101)
T ss_dssp TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHT--
T ss_pred CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--
Confidence 46788876422110 0122699999999999999999 999 999999999999875 677777765
Q ss_pred CCCEEEEEEEECCE
Q 013804 408 VGDEVIVEVLRGDQ 421 (436)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (436)
.|+++.|+|.|+++
T Consensus 85 ~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 85 AGYAVSLRVQHRLE 98 (101)
T ss_dssp CCSEEEEEEEEESC
T ss_pred CCCeEEEEEEeCCC
Confidence 48899999999875
No 233
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.71 E-value=7.4e-09 Score=87.67 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=62.6
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcC--
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC-- 406 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~-- 406 (436)
..||+.+.........+..|++|..|.+++||+++| |++ ||+|++|||+.|.+ +.++..+|...
T Consensus 37 ~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 37 AGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRM-----------NDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp TCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCS-----------CCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred CccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 467888764321111112589999999999999999 999 99999999999987 66888888864
Q ss_pred ---CCCCEEEEEEEECCE
Q 013804 407 ---KVGDEVIVEVLRGDQ 421 (436)
Q Consensus 407 ---~~g~~v~l~v~R~g~ 421 (436)
.++++|+|+|.|+++
T Consensus 106 ~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHTCEEEEEEEECSC
T ss_pred cccCCCCEEEEEEEeCCC
Confidence 358999999999875
No 234
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.71 E-value=1.1e-08 Score=94.22 Aligned_cols=85 Identities=19% Similarity=0.301 Sum_probs=68.5
Q ss_pred ceecceeeecch--hhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQ--SVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~--~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~ 408 (436)
++++|+.+.+.. .++. .|++|.+|.++|||+++||++ .||+|++|||+ |.+++|+.+++... +
T Consensus 94 ~~~lGi~~~~~~~~~~~~---~Gv~V~~V~~~spA~~aGl~~----------~GD~I~~ing~-v~~~~~l~~~l~~~-~ 158 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANE---NVWHVLEVESNSPAALAGLRP----------HSDYIIGADTV-MNESEDLFSLIETH-E 158 (209)
T ss_dssp SSSSCEEEEEEECTTGGG---SCEEEEEECTTSHHHHHTCCT----------TTEEEEEESSC-CCSSSCHHHHHHHT-T
T ss_pred cCccceEEeecChhHccc---cceEEEEeCCCChHHHCCCCC----------CCCEEEECCCE-eCCHHHHHHHHHhC-C
Confidence 468999887422 1222 699999999999999999986 16999999998 99999999999986 8
Q ss_pred CCEEEEEEEECCE--EEEEEEEee
Q 013804 409 GDEVIVEVLRGDQ--KEKIPVKLE 430 (436)
Q Consensus 409 g~~v~l~v~R~g~--~~~~~v~~~ 430 (436)
|+++.++|.|++. ..++++++.
T Consensus 159 g~~v~l~v~r~~~~~~~~v~l~p~ 182 (209)
T 3rle_A 159 AKPLKLYVYNTDTDNCREVIITPN 182 (209)
T ss_dssp TSCEEEEEEETTTTEEEEEEECCC
T ss_pred CCeEEEEEEECCceEEEEEEEEec
Confidence 9999999999764 455555553
No 235
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.71 E-value=1.5e-08 Score=83.54 Aligned_cols=71 Identities=30% Similarity=0.470 Sum_probs=60.1
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+..... .|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .|
T Consensus 27 ~lG~~l~~~~~------~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g 87 (111)
T 2dlu_A 27 GLGFGIVGGKT------SGVVVRTIVPGGLADRDGRLQT-----------GDHILKIGGTNVQGMTSEQVAQVLRN--CG 87 (111)
T ss_dssp CCCEEEECCSS------SSBEEEEECTTSSHHHHTCCCS-----------SCEEEEESSCCCTTSCHHHHHHHHHH--HC
T ss_pred ccCEEEeccCC------CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 57888764321 589999999999999999 999 9999999999999 46888888876 47
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.|+|.|+++.
T Consensus 88 ~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 88 NSVRMLVARDPAG 100 (111)
T ss_dssp SEEEEEEEESCTT
T ss_pred CeEEEEEEeCCCC
Confidence 8999999998765
No 236
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.71 E-value=1.1e-08 Score=83.82 Aligned_cols=68 Identities=26% Similarity=0.391 Sum_probs=53.1
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
.+|+.+.... .|++|.+|.+++||+++| |++ ||+|++|||++|.+. .+...++.. .+
T Consensus 15 glG~~i~~~~-------~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~~--~~ 74 (106)
T 2la8_A 15 ELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFKG--AN 74 (106)
T ss_dssp TTCCEEEECS-------SSEEEEECCTTSCHHHHTTCCT-----------TCEEEEESSCBCSSSCHHHHHHHHHS--CB
T ss_pred ccCEEEEeCC-------CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC--CC
Confidence 3566654421 689999999999999999 999 999999999999864 344444443 56
Q ss_pred CEEEEEEEECC
Q 013804 410 DEVIVEVLRGD 420 (436)
Q Consensus 410 ~~v~l~v~R~g 420 (436)
+++.++|.|..
T Consensus 75 ~~v~l~v~R~~ 85 (106)
T 2la8_A 75 GKVSMEVTRPK 85 (106)
T ss_dssp SCEEEEEEECC
T ss_pred CeEEEEEEeCC
Confidence 77999999964
No 237
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.71 E-value=9.3e-07 Score=81.49 Aligned_cols=162 Identities=14% Similarity=0.278 Sum_probs=106.3
Q ss_pred hCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCC-CeEEEEecCCcEEeeE-----EEEEcCC
Q 013804 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQD 198 (436)
Q Consensus 125 ~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d~~ 198 (436)
+...|+.++...... ...--|+..+ .||+|++|.+... ..++|+...|. |... .+..-+.
T Consensus 14 ia~~iC~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~-f~v~nt~~lki~~i~g 79 (241)
T 3mmg_A 14 ISACVCLLENSSDGH-----------SERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGE-FAVANSTQLQMKPVEG 79 (241)
T ss_dssp HHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEE-EEEEEGGGSCEEECTB
T ss_pred hhheEEEEEEEeCCC-----------EEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCce-EEccCCCceeeEEeCC
Confidence 355688887643221 1233566665 4999999999865 46888888774 3222 3455678
Q ss_pred CCeEEEEEcCCCCCCcceecC-CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCC
Q 013804 199 KDVAVLRIDAPKDKLRPIPIG-VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (436)
Q Consensus 199 ~DlAlLkv~~~~~~~~~~~l~-~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G 277 (436)
.||.++|+.. ++||.+-. .-..+..||.|+++|..+.... ....|+........ .+ ..+...-.....|
T Consensus 80 ~DiiiIrmPk---DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~--~~s~vSesS~i~p~--~~---~~fWkHwIsT~~G 149 (241)
T 3mmg_A 80 RDIIVIKMAK---DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKS--VSSLVSESSHIVHK--ED---TSFWQHWITTKDG 149 (241)
T ss_dssp SSCEEEECCT---TSCCCCSCCCBCCCCTTCCEEEEEEEECSSC--EEEEEEEEECCEEC--TT---SSEEEECBCCCTT
T ss_pred ccEEEEeCCC---CCCCcchhcccCCCCCCCeEEEEEeecccCC--ccEEECCcceeEEc--CC---CCEEEEEcCCCCC
Confidence 9999999954 56665432 2356889999999996554332 12223322211111 11 3566777788899
Q ss_pred CCCCeEECC-CCcEEEEEeeeecCCCCCCcceeeeeee
Q 013804 278 NSGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVD 314 (436)
Q Consensus 278 ~SGGPlvd~-~G~VVGI~s~~~~~~~~~~~~~~aIP~~ 314 (436)
+-|+|+|+. +|.+|||++..... ...+|+.|+.
T Consensus 150 ~CGlPlVs~~Dg~IVGiHsl~~~~----~~~N~F~~f~ 183 (241)
T 3mmg_A 150 QAGSPLVSIIDGNILGIHSLTHTT----NGSNYFVEFP 183 (241)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT----TCCEEEEECC
T ss_pred cCCCeEEEcCCCcEEEEEecccCC----CCcEEEEcCC
Confidence 999999985 99999999987643 2357777763
No 238
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.70 E-value=1.3e-08 Score=82.64 Aligned_cols=71 Identities=27% Similarity=0.352 Sum_probs=56.3
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+..... ..|++|..|.++|||+++| |++ ||+|++|||++|.+ +.++...+.. .+
T Consensus 23 glG~~~~~~~~-----~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 84 (104)
T 3i4w_A 23 GLGFNIVGGEX-----GEGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKN--AG 84 (104)
T ss_dssp BTSEEEEECC------CCCEEEEEECTTSHHHHHCCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--SC
T ss_pred ccCEEEECCCC-----CCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 47777764321 1489999999999999999 999 99999999999965 4455555554 67
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+++.++|.|+++
T Consensus 85 ~~v~l~v~r~~~ 96 (104)
T 3i4w_A 85 QTVTIIAQYKPE 96 (104)
T ss_dssp SEEEEEEEECHH
T ss_pred CeEEEEEEECcc
Confidence 899999999854
No 239
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=8.2e-09 Score=83.73 Aligned_cols=73 Identities=22% Similarity=0.364 Sum_probs=58.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++. ..|
T Consensus 23 g~G~~~~~~~~~----~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g 85 (103)
T 1wfv_A 23 GFGFSIRGGREY----KMDLYVLRLAEDGPAIRNGRMRV-----------GDQIIEINGESTRDMTHARAIELIK--SGG 85 (103)
T ss_dssp SSSBCCEEETTT----TEEEECCCBCTTSHHHHHCSSCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HHC
T ss_pred cCCEEEeccccC----CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 477777643211 1489999999999999999 999 99999999999997 467776666 368
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.|+|.|+++.
T Consensus 86 ~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 86 RRVRLLLKRGTGS 98 (103)
T ss_dssp SEECEEEECTTCS
T ss_pred CeEEEEEEECCCC
Confidence 8999999998864
No 240
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.69 E-value=1.4e-08 Score=81.82 Aligned_cols=67 Identities=25% Similarity=0.204 Sum_probs=55.5
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcC-CCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQC-KVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~-~~g 409 (436)
..|+.+.... .+.+|.+|.++|||++|||++ ||+|++|||++|. +|+|+..++... ..|
T Consensus 29 g~G~~l~~~~-------~~~~I~~V~~gSpA~~AGL~~-----------GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g 90 (101)
T 3qik_A 29 DYGFDIEEKN-------KAVVVKSVQRGSLAEVAGLQV-----------GRKIYSINEDLVFLRPFSEVESILNQSFCSR 90 (101)
T ss_dssp SSSEEEEEET-------TEEEEEEECTTSHHHHHTCCT-----------TCBEEEETTEESTTSCHHHHHHHHHHHHHTT
T ss_pred cccEEEEccC-------CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEEcCcCCHHHHHHHHHHhhccC
Confidence 3566655422 578999999999999999999 9999999999984 999999999874 467
Q ss_pred CEEEEEEE
Q 013804 410 DEVIVEVL 417 (436)
Q Consensus 410 ~~v~l~v~ 417 (436)
+.+.|.|.
T Consensus 91 ~~v~LLV~ 98 (101)
T 3qik_A 91 RPLRLLVA 98 (101)
T ss_dssp CCEEEEEE
T ss_pred CeEEEEEe
Confidence 88888775
No 241
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.69 E-value=2.9e-08 Score=79.51 Aligned_cols=57 Identities=33% Similarity=0.482 Sum_probs=52.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~ 419 (436)
.|++|..|.+++||+++||++ ||+|++|||++|.+ ++|+.+++... ++++.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTP-----------GDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEEC
Confidence 589999999999999999999 99999999999999 68999999874 56999999875
No 242
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.69 E-value=3.2e-08 Score=78.73 Aligned_cols=72 Identities=24% Similarity=0.449 Sum_probs=58.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g 409 (436)
-||+.+.... ...+++|..|.+++||+++| |++ ||+|++|||++| .+++++..++... +
T Consensus 16 ~lG~~i~~~~-----~~~~~~V~~v~~gspA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 77 (93)
T 3o46_A 16 PLGATIKKDE-----QTGAIIVARIMRGGAADRSGLIHV-----------GDELREVNGIPVEDKRPEEIIQILAQS--Q 77 (93)
T ss_dssp CCCEEEEECT-----TTCCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEESTTSCHHHHHHHHHHC--C
T ss_pred CccEEEEecC-----CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 5777776431 12689999999999999999 999 999999999999 8899999999873 3
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.++|.|..+.
T Consensus 78 ~~v~l~v~~~~~~ 90 (93)
T 3o46_A 78 GAITFKIIPGSKE 90 (93)
T ss_dssp EEEEEEEECC---
T ss_pred CeEEEEEEeCCCC
Confidence 4899999986543
No 243
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=2.1e-08 Score=79.70 Aligned_cols=72 Identities=26% Similarity=0.342 Sum_probs=57.3
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
-+|+.+...... ..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .+
T Consensus 17 glG~~l~~~~~~----~~~~~V~~V~~~spA~~aGgl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 79 (93)
T 2dkr_A 17 GLGFNIMGGKEQ----NSPIYISRVIPGGVADRHGGLKR-----------GDQLLSVNGVSVEGEQHEKAVELLKA--AQ 79 (93)
T ss_dssp CCCEEEECSSSS----SCCCEEEEECTTSHHHHHCCCCT-----------TCBEEEETTEECTTSCHHHHHHHHHH--CC
T ss_pred CccEEEecccCC----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 467777532110 1689999999999999996 999 99999999999995 6788877776 35
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+++.|+|.|+.+
T Consensus 80 ~~v~l~v~r~~~ 91 (93)
T 2dkr_A 80 GSVKLVVRSGPS 91 (93)
T ss_dssp SEEEEEECCCCS
T ss_pred CcEEEEEEeCCC
Confidence 689999998753
No 244
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=3.4e-08 Score=78.40 Aligned_cols=55 Identities=22% Similarity=0.402 Sum_probs=49.9
Q ss_pred ceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 013804 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 351 gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g~~v~l~v~R~ 419 (436)
| +|..|.++|||+++||++ ||+|++|||++| .++.++.+++.. .|+++.|+|.+.
T Consensus 33 G-~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 33 G-IICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp T-EEEEECTTSHHHHHTCCS-----------SCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEEECC
T ss_pred C-EEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEC
Confidence 5 899999999999999999 999999999999 589999999985 488999998864
No 245
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2e-08 Score=81.94 Aligned_cols=76 Identities=25% Similarity=0.375 Sum_probs=60.9
Q ss_pred ecceeeecchhhh--hcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 333 ILGIKFAPDQSVE--QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 333 ~lGv~~~~~~~~~--~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
.+|+.+....... ..+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 19 glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 85 (105)
T 1wha_A 19 GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQV-----------GDRVLSINGVDVTEARHDHAVSLLTA-- 85 (105)
T ss_dssp CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHTS--
T ss_pred ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 4788876432110 1123699999999999999999 999 99999999999988 8888888876
Q ss_pred CCCEEEEEEEECCE
Q 013804 408 VGDEVIVEVLRGDQ 421 (436)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (436)
.|+.+.|+|.|+++
T Consensus 86 ~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 86 ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEEEEECCC
T ss_pred CCCeEEEEEEECCC
Confidence 37889999999754
No 246
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.8e-08 Score=81.49 Aligned_cols=73 Identities=14% Similarity=0.164 Sum_probs=57.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCCH-HHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG-SDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s~-~dl~~~l~~~~~g~ 410 (436)
.+|+.+...... ..+++|..|.+++||+++ ||++ ||+|++|||++|.++ .++..++.. .++
T Consensus 22 ~~G~~~~gg~~~----~~~v~V~~V~~~spA~~agGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~--~~~ 84 (100)
T 2edp_A 22 PWGFTLKGGLEH----CEPLTVSKIEDGGKAALSQKMRT-----------GDELVNINGTPLYGSRQEALILIKG--SFR 84 (100)
T ss_dssp CCCCCEEEEGGG----TEEEEECCCCTTSHHHHHTSCCT-----------TCEEEEETTEECCSCSHHHHHHHHT--CCS
T ss_pred CcCEEEeccCCC----CCCeEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEccchHHHHHHHHHh--CCC
Confidence 467776532111 147999999999999999 9999 999999999999985 566666665 468
Q ss_pred EEEEEEEECCEE
Q 013804 411 EVIVEVLRGDQK 422 (436)
Q Consensus 411 ~v~l~v~R~g~~ 422 (436)
.++|+|.|+++.
T Consensus 85 ~v~l~v~R~~~~ 96 (100)
T 2edp_A 85 ILKLIVRRRNSG 96 (100)
T ss_dssp SCEEEEEECCCS
T ss_pred eEEEEEEeCCCC
Confidence 899999998763
No 247
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.68 E-value=2.2e-08 Score=79.31 Aligned_cols=72 Identities=24% Similarity=0.352 Sum_probs=56.5
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+..... ..|++|..|.++|||+++||++ ||+|++|||++|.+ ..++..++.. ..++
T Consensus 15 g~G~~~~~~~~-----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~ 77 (91)
T 1g9o_A 15 GYGFHLHGEKG-----KLGQYIRLVEPGSPAEKAGLLA-----------GDRLVEVNGENVEKETHQQVVSRIRA-ALNA 77 (91)
T ss_dssp BCCEEEEECTT-----CSSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT-CSSE
T ss_pred cccEEEEecCC-----CCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc-CCCc
Confidence 47777754321 2589999999999999999999 99999999999998 6788888876 3455
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
.+.+.+.|+++
T Consensus 78 ~~~~~~~r~~~ 88 (91)
T 1g9o_A 78 VRLLVVDPETD 88 (91)
T ss_dssp EEEEEECCCCS
T ss_pred EEEEEEcCCcc
Confidence 55566666654
No 248
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.68 E-value=2.4e-08 Score=84.48 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=62.1
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC---CHHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~---s~~dl~~~l~~~~ 407 (436)
..+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++..
T Consensus 37 ~~lG~~i~g~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~-- 102 (128)
T 2db5_A 37 GGLGFSVVALRSQ-NLGKVDIFVKDVQPGSVADRDQRLKE-----------NDQILAINHTPLDQNISHQQAIALLQQ-- 102 (128)
T ss_dssp SCCCCEEEEEECS-SSSCEEEEEECCCTTSHHHHTCCCCS-----------SCBEEEESSCBCSTTSCHHHHHHHHHH--
T ss_pred CccCEEEecccCC-CCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--
Confidence 3577777532111 1122589999999999999999 999 9999999999998 89999998887
Q ss_pred CCCEEEEEEEECCEE
Q 013804 408 VGDEVIVEVLRGDQK 422 (436)
Q Consensus 408 ~g~~v~l~v~R~g~~ 422 (436)
.|+.+.|+|.|+...
T Consensus 103 ~~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 103 TTGSLRLIVAREPVH 117 (128)
T ss_dssp CCSEEEEEEEECCCS
T ss_pred CCCeEEEEEEcCCCC
Confidence 679999999998643
No 249
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.68 E-value=8.6e-09 Score=86.39 Aligned_cols=62 Identities=18% Similarity=0.344 Sum_probs=54.0
Q ss_pred cceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 013804 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 424 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (436)
.|++|..|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.. .+++++|+|.|+++..+
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRV-----------GDRIVTICGTSTEGMTHTQAVNLLKN--ASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEECCTTSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccce
Confidence 58999999999999999 9999 99999999999987 5777777776 46789999999987543
No 250
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.68 E-value=2.1e-08 Score=82.32 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=60.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC-C
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-V 408 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~-~ 408 (436)
.||+.+..... .-+..|++|..|.+++||+++| |++ ||+|++|||+++.+ ++++..++.... .
T Consensus 18 ~lG~~i~g~~~--~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 18 FLGISIVGQSN--ERGDGGIYIGSIMKGGAVAADGRIEP-----------GDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CCCEEEEEECS--STTCCEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred ccCEEEEcCcC--CCCCCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 46777654211 0123689999999999999999 999 99999999999998 899999998741 2
Q ss_pred CCEEEEEEEECCEEE
Q 013804 409 GDEVIVEVLRGDQKE 423 (436)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (436)
++.|+|+|.|+++..
T Consensus 85 ~~~v~l~v~R~~~~~ 99 (108)
T 3cbz_A 85 PGPIVLTVAKSGGGS 99 (108)
T ss_dssp SSCEEEEEECCCC-C
T ss_pred CCeEEEEEEeCCCCC
Confidence 345999999987643
No 251
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=1.9e-08 Score=82.43 Aligned_cols=60 Identities=25% Similarity=0.420 Sum_probs=54.6
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .|+++.|+|.|+++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCS-----------SCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 699999999999999999 999 9999999999999 77788888876 489999999998764
No 252
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.67 E-value=3.1e-08 Score=82.16 Aligned_cols=72 Identities=21% Similarity=0.400 Sum_probs=58.5
Q ss_pred ceecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCC
Q 013804 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCK 407 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~ 407 (436)
.+.+|+.+...... ..+++|..|.++|||+++| |++ ||+|++|||++| .+++++.+++...
T Consensus 35 ~~~lG~~l~~~~~~----~~~~~V~~V~~gspA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~- 98 (114)
T 2gzv_A 35 QNLIGISIGGGAQY----CPCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQEV- 98 (114)
T ss_dssp TSCCSEEEEECCC------CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CCcEeEEEEeCCCC----CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45789988753211 1479999999999999999 999 999999999999 8999999998863
Q ss_pred CCCEEEEEEEEC
Q 013804 408 VGDEVIVEVLRG 419 (436)
Q Consensus 408 ~g~~v~l~v~R~ 419 (436)
++.++|+|++.
T Consensus 99 -~~~v~l~v~~~ 109 (114)
T 2gzv_A 99 -KGEVTIHYNKL 109 (114)
T ss_dssp -CSEEEEEEECC
T ss_pred -CCeEEEEEEec
Confidence 35688888653
No 253
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=3e-08 Score=81.16 Aligned_cols=76 Identities=21% Similarity=0.230 Sum_probs=58.9
Q ss_pred ecceeeecc--hhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 333 ILGIKFAPD--QSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 333 ~lGv~~~~~--~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
.||+.+... ......+..|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 21 glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 87 (107)
T 1wf8_A 21 GLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQV-----------NDQIVEVDGISLVGVTQNFAATVLRN-- 87 (107)
T ss_dssp BSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCT-----------TCBEEEETTEECBSCCHHHHHHHHHH--
T ss_pred cccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--
Confidence 477777641 00001123699999999999999999 999 99999999999985 6677777765
Q ss_pred CCCEEEEEEEECCE
Q 013804 408 VGDEVIVEVLRGDQ 421 (436)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (436)
.++++.|+|.|++.
T Consensus 88 ~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 88 TKGNVRFVIGREKP 101 (107)
T ss_dssp CCSEEEEEEEEECC
T ss_pred CCCeEEEEEEeCCC
Confidence 58999999999764
No 254
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.67 E-value=5.1e-08 Score=77.84 Aligned_cols=69 Identities=26% Similarity=0.324 Sum_probs=54.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
..+|+.+..... -+..|++|..|.++|||+++||++ ||+|++|||++|. +++++.+++.+
T Consensus 20 ~~~Gf~v~~~~~---~~~~g~~V~~V~~~spA~~aGL~~-----------GD~Il~vng~~v~~~~~~~l~~~l~~---- 81 (94)
T 3kzd_A 20 DTYGFSLSSVEE---DGIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ---- 81 (94)
T ss_dssp -CCSEEEEEECS---SSSCEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHS----
T ss_pred CCcCEEEEecCC---CCcCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC----
Confidence 457888765221 123689999999999999999999 9999999999999 57899988874
Q ss_pred CEEEEEEEE
Q 013804 410 DEVIVEVLR 418 (436)
Q Consensus 410 ~~v~l~v~R 418 (436)
..++++|..
T Consensus 82 ~~l~ltV~~ 90 (94)
T 3kzd_A 82 PSLGLLVRT 90 (94)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 456666653
No 255
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.67 E-value=2.7e-08 Score=78.92 Aligned_cols=72 Identities=32% Similarity=0.381 Sum_probs=58.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+.... +..|++|..|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .
T Consensus 16 ~~lG~~~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 77 (92)
T 2qg1_A 16 KGLGLSIVGKR-----NDTGVFVSDIVKGGIADADGRLMQ-----------GDQILMVNGEDVRNATQEAVAALLKC--S 77 (92)
T ss_dssp SCCSEEEECCS-----SSCSCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--C
T ss_pred CcccEEEEecc-----CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 35777775422 12699999999999999999 999 99999999999986 4666666665 5
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
+++++++|.|++.
T Consensus 78 ~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 78 LGTVTLEVGRIST 90 (92)
T ss_dssp CSEEEEEEECCCC
T ss_pred CCeEEEEEEcccc
Confidence 7889999999864
No 256
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.67 E-value=2.3e-08 Score=83.37 Aligned_cols=73 Identities=26% Similarity=0.332 Sum_probs=57.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCE
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDE 411 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~ 411 (436)
.+|+.+..... ..|++|..|.+++||+++| |++ ||+|++|||++|.++.+..........|++
T Consensus 26 glG~~l~~~~~-----~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 26 GLGFNIVGGED-----GEGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCCEEEEECGG-----GCCEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CccEEEecCCC-----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 37888765321 1689999999999999999 999 999999999999998654433332347899
Q ss_pred EEEEEEECCE
Q 013804 412 VIVEVLRGDQ 421 (436)
Q Consensus 412 v~l~v~R~g~ 421 (436)
+.++|.|+++
T Consensus 90 v~l~v~r~~~ 99 (119)
T 1tp5_A 90 VTIIAQYKPE 99 (119)
T ss_dssp EEEEEEECHH
T ss_pred EEEEEEECCc
Confidence 9999999754
No 257
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=2.4e-08 Score=80.69 Aligned_cols=59 Identities=29% Similarity=0.348 Sum_probs=51.9
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.+++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++.. .++++.|+|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 578999999999999999999 99999999999994 6889888876 35669999999753
No 258
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.66 E-value=2.1e-08 Score=82.78 Aligned_cols=58 Identities=29% Similarity=0.352 Sum_probs=52.6
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRG 419 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~ 419 (436)
.+++|..|.+++||+++||++ ||+|++|||++|. +++|+.+++.. ..++++.|+|.|.
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~-----------GD~Il~InG~~v~~~~~~d~~~~i~~-~~~~~v~l~V~~~ 95 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKE-----------GDYIVSIQGVDCKWLTVSEVMKLLKS-FGGEEVEMKVVSL 95 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH-TTTSEECEEEECE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCCceEEEEEEec
Confidence 478999999999999999999 9999999999999 99999999987 3567899999874
No 259
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.66 E-value=3.1e-08 Score=80.82 Aligned_cols=77 Identities=19% Similarity=0.315 Sum_probs=59.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... .....|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 21 ~glG~~i~~~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~ 86 (106)
T 3axa_A 21 NGMGLSIVAAKGA-GQDKLGIYVKSVVKGGAADVDGRLAA-----------GDQLLSVDGRSLVGLSQERAAELMTR--T 86 (106)
T ss_dssp SSCSEEEEEEECS-SCSSEEEEEEEEBTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--C
T ss_pred CccCEEEEeecCC-CCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 3467766531100 0112689999999999999999 999 99999999999984 6777777755 6
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|+++.|+|.|+++.
T Consensus 87 g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 87 SSVVTLEVAKQGAI 100 (106)
T ss_dssp CSEEEEEEECCCSS
T ss_pred CCeEEEEEEeCCcc
Confidence 89999999998764
No 260
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=1.8e-08 Score=84.01 Aligned_cols=74 Identities=23% Similarity=0.355 Sum_probs=60.8
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g 409 (436)
.||+.+...... +..+++|..|.+++||+++| |++ ||+|++|||++| .+++++.+++.. .|
T Consensus 28 ~lG~~i~~~~~~---~~~~~~V~~V~~~spA~~aG~l~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g 91 (117)
T 1v62_A 28 ALGISLTTTSLR---NKSVITIDRIKPASVVDRSGALHP-----------GDHILSIDGTSMEHCSLLEATKLLAS--IS 91 (117)
T ss_dssp CCCCEEEEECCS---SSCEEEEEECCTTSHHHHHTCCCT-----------TCBEEEETTEETTSCCHHHHHHHHHS--CS
T ss_pred cccEEEEccCCC---CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 467776542210 11359999999999999999 999 999999999999 779999999984 68
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+.++|+|.|+++.
T Consensus 92 ~~v~l~v~r~~~~ 104 (117)
T 1v62_A 92 EKVRLEILPVPQS 104 (117)
T ss_dssp SEEEEEECCBTTB
T ss_pred CeEEEEEEECCCC
Confidence 9999999998764
No 261
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.66 E-value=4e-08 Score=82.06 Aligned_cols=75 Identities=21% Similarity=0.394 Sum_probs=60.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..+..|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .
T Consensus 36 ~~lGf~i~gg~~~-~~~~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~ 101 (118)
T 3b76_A 36 ESLGMTVAGGASH-REWDLPIYVISVEPGGVISRDGRIKT-----------GDILLNVDGVELTEVSRSEAVALLKR--T 101 (118)
T ss_dssp CCCCEEEEECSCS-TTCCCCEEEEEECTTSHHHHHCSSCT-----------TCEEEEETTEEGGGSCHHHHHHHHHS--C
T ss_pred CccCEEEecCCCC-CCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 4577776642210 0122689999999999999999 999 9999999999999 88999998886 4
Q ss_pred CCEEEEEEEECC
Q 013804 409 GDEVIVEVLRGD 420 (436)
Q Consensus 409 g~~v~l~v~R~g 420 (436)
+++++|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 788999999853
No 262
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.65 E-value=4.5e-08 Score=77.33 Aligned_cols=71 Identities=28% Similarity=0.344 Sum_probs=55.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..|++|..|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.. .
T Consensus 16 ~~lG~~i~~~~~~----~~g~~V~~V~~~spA~~aggl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~ 78 (90)
T 1qav_A 16 GGLGISIKGGREN----KMPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--T 78 (90)
T ss_dssp TCCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--C
T ss_pred CCcCEEEEcccCC----CCCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3567776542211 158999999999999999 9999 99999999999986 5666666665 5
Q ss_pred CCEEEEEEEEC
Q 013804 409 GDEVIVEVLRG 419 (436)
Q Consensus 409 g~~v~l~v~R~ 419 (436)
|++++|+|.|-
T Consensus 79 ~~~v~l~v~r~ 89 (90)
T 1qav_A 79 GKEVVLEVKYM 89 (90)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 78899999873
No 263
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.65 E-value=1.2e-08 Score=86.15 Aligned_cols=75 Identities=21% Similarity=0.302 Sum_probs=64.3
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.+|+.+.... +..|++|..|.+++||+++||++ ||+|++|||++|.+ +.++..++... .|+
T Consensus 21 g~G~~l~~~~-----~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 83 (128)
T 2kjd_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDE 83 (128)
T ss_dssp SCCEEEEECS-----SSCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-CSE
T ss_pred cccEEEEecC-----CCCCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCC
Confidence 4777765432 12589999999999999999999 99999999999999 99999999885 788
Q ss_pred EEEEEEEECCEEEE
Q 013804 411 EVIVEVLRGDQKEK 424 (436)
Q Consensus 411 ~v~l~v~R~g~~~~ 424 (436)
.+.++|.|+|+..+
T Consensus 84 ~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 84 TKLLVVDRETDEFF 97 (128)
T ss_dssp EEEEEECHHHHHHH
T ss_pred EEEEEEEeCCcceE
Confidence 99999999887655
No 264
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.65 E-value=1.6e-07 Score=81.79 Aligned_cols=127 Identities=17% Similarity=0.241 Sum_probs=77.8
Q ss_pred CCCCeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEecCCCCC--------CceeEeEEeeeeeeeccC-CCCCCc
Q 013804 197 QDKDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD--------HTLTTGVISGLRREISSA-ATGRPI 264 (436)
Q Consensus 197 ~~~DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~--------~~~~~G~vs~~~~~~~~~-~~~~~~ 264 (436)
..+||||||++.+. ..+.|+.|.... ...|+.+++.||..... .......+.-+....+.. ......
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 36799999998764 246788886543 46799999999975322 122333332222211110 000111
Q ss_pred ccEEEE-----ccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccchhhhhccc
Q 013804 265 QDVIQT-----DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (436)
Q Consensus 265 ~~~i~~-----~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 325 (436)
...+.. ....|.|+|||||+- +|+++||+|++...|+.....+.+..+....+|+++.++
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 223333 246789999999995 589999999974445433345666777788888877553
No 265
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.65 E-value=2.7e-08 Score=82.54 Aligned_cols=76 Identities=24% Similarity=0.384 Sum_probs=60.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 28 ~glG~~l~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~ 91 (116)
T 2dm8_A 28 SGLGLSIVGGKDT---PLNAIVIHEVYEEGAAARDGRLWA-----------GDQILEVNGVDLRNSSHEEAITALRQ--T 91 (116)
T ss_dssp SCCCCCCBCCTTS---SCSSEECCCCCSSSHHHHHTCCCT-----------TCEEEEETTEECSSSCHHHHHHHHHT--C
T ss_pred CcccEEEeCCCCC---CcCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3577777542211 12589999999999999999 999 99999999999988 6788877765 3
Q ss_pred CCEEEEEEEECCEEE
Q 013804 409 GDEVIVEVLRGDQKE 423 (436)
Q Consensus 409 g~~v~l~v~R~g~~~ 423 (436)
++++.|+|.|+++..
T Consensus 92 ~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 92 PQKVRLVVYRDEAHY 106 (116)
T ss_dssp CSEEEEEEECCSSCC
T ss_pred CCeEEEEEEeCCccc
Confidence 489999999988754
No 266
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.64 E-value=3.5e-08 Score=80.62 Aligned_cols=60 Identities=28% Similarity=0.388 Sum_probs=53.5
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.+++|..|.+++||+++||++ ||+|++|||++|. ++.++..++.. .|+++.|+|.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRK-----------GDRILEVNGVNVEGATHKQVVDLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCCC
Confidence 345799999999999999999 9999999999999 88999999885 589999999997653
No 267
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.64 E-value=4.4e-09 Score=87.16 Aligned_cols=79 Identities=19% Similarity=0.306 Sum_probs=61.2
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHH--HHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~d--l~~~l~~~~~g~ 410 (436)
.+|+.+..... ...|++|..|.+++||+++||++ ||+|++|||++|.++.+ +..++.. ++
T Consensus 28 ~lG~~l~~~~~----~~~gv~V~~V~~~s~A~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~---~~ 89 (114)
T 1x5n_A 28 GLGCSISSGPI----QKPGIFISHVKPGSLSAEVGLEI-----------GDQIVEVNGVDFSNLDHKEAVNVLKS---SR 89 (114)
T ss_dssp CCCEEEEECCS----SSCSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEETTSCCTTHHHHHHHH---CS
T ss_pred ceeEEEeecCC----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc---CC
Confidence 47887764321 12589999999999999999999 99999999999999864 6666654 25
Q ss_pred EEEEEEEEC-CEEEEEEEEe
Q 013804 411 EVIVEVLRG-DQKEKIPVKL 429 (436)
Q Consensus 411 ~v~l~v~R~-g~~~~~~v~~ 429 (436)
++.++|.|+ |+.+++.+.+
T Consensus 90 ~v~l~v~r~~g~~~~~~~~~ 109 (114)
T 1x5n_A 90 SLTISIVAAAGRELFMTDRS 109 (114)
T ss_dssp SEEEEECSSTTTHHHHSSCC
T ss_pred eEEEEEEcCCCCceEEEecc
Confidence 799999998 8765554444
No 268
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.64 E-value=4.8e-08 Score=80.18 Aligned_cols=58 Identities=26% Similarity=0.369 Sum_probs=52.6
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.|++|..|.+++||+++||++ ||+|++|||++|.++ .++..++.. .|+++.|+|.|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECC
Confidence 489999999999999999999 999999999999999 899988876 3788999998853
No 269
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.63 E-value=4.1e-08 Score=88.61 Aligned_cols=62 Identities=27% Similarity=0.328 Sum_probs=56.4
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 424 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .++.+.|+|.|+++...
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCBHHHHHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCCcCCCCCHHHHHHHHHc--CCCeEEEEEeCCCCccc
Confidence 689999999999999999 999 99999999999999 9999999975 47899999999887543
No 270
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.63 E-value=7.7e-08 Score=87.23 Aligned_cols=59 Identities=22% Similarity=0.354 Sum_probs=54.6
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.++|||+++||++ ||+|++|||++|.+ +.++..++.. |+.+.|+|.|+|+.
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQV-----------GDEIVRINGYSISSCTHEEVINLIRT---EKTVSIKVRHIGLI 170 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEEEEECCEE
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEEEEECCcc
Confidence 589999999999999999999 99999999999998 8999888765 89999999999873
No 271
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.63 E-value=9e-08 Score=97.82 Aligned_cols=71 Identities=24% Similarity=0.460 Sum_probs=64.6
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
.|++|.+|.+++||+++||++ ||+|++|||++|.+++|+.+++.. .+ +.+.|+|.|+|+.+.+.+..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~l~~-~~-~~v~l~v~R~g~~~~~~~~~ 429 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQK-----------DDVIIGVNRDRVNSIAEMRKVLAA-KP-AIIALQIVRGNESIYLLMRL 429 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CC-CeEEEEEEECCEEEEEEEEe
Confidence 589999999999999999999 999999999999999999999987 33 48999999999999998887
Q ss_pred ecCC
Q 013804 430 EPKP 433 (436)
Q Consensus 430 ~~~~ 433 (436)
..+.
T Consensus 430 ~~~~ 433 (436)
T 4a8c_A 430 EHHH 433 (436)
T ss_pred cccC
Confidence 7654
No 272
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.62 E-value=3.7e-08 Score=80.81 Aligned_cols=75 Identities=25% Similarity=0.263 Sum_probs=58.2
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+........-+..|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++..++... ++
T Consensus 27 glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~ 94 (108)
T 2d92_A 27 GLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLP-----------GDRLVSVNEYCLDNTSLAEAVEILKAV-PP 94 (108)
T ss_dssp CCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHHS-CS
T ss_pred ccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 46776653211000012689999999999999999 999 99999999999965 88999999873 45
Q ss_pred CEEEEEEEEC
Q 013804 410 DEVIVEVLRG 419 (436)
Q Consensus 410 ~~v~l~v~R~ 419 (436)
++++|+|.|.
T Consensus 95 ~~v~l~v~R~ 104 (108)
T 2d92_A 95 GLVHLGICSG 104 (108)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEcC
Confidence 6899999885
No 273
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.1e-08 Score=86.46 Aligned_cols=59 Identities=29% Similarity=0.438 Sum_probs=54.9
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++||++ ||+|++|||++|. +++++.+++.. .|+++.|+|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCT-----------GDRIIKVNGESVIGKTYSQVIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCS-----------SCCCCEETTEECSSCCHHHHHHHHHT--CTTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCC
Confidence 689999999999999999999 9999999999998 89999999986 38999999999875
No 274
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.62 E-value=1.4e-07 Score=95.00 Aligned_cols=84 Identities=26% Similarity=0.387 Sum_probs=68.6
Q ss_pred ceecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 013804 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (436)
Q Consensus 331 ~~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~ 408 (436)
+..+|+.+.... ..-.+++|..|.+++||+++||++ ||+|++|||++|.++ +++..++.. .+
T Consensus 84 ~~giG~~~~~~~----~~~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~-~~ 147 (388)
T 1fc6_A 84 VTGVGLEITYDG----GSGKDVVVLTPAPGGPAEKAGARA-----------GDVIVTVDGTAVKGMSLYDVSDLLQG-EA 147 (388)
T ss_dssp CBBCSEEEEECT----TCSSCEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHCB-ST
T ss_pred eEEEEEEEEEee----cCCCcEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc-CC
Confidence 356888876431 011689999999999999999999 999999999999996 788888875 68
Q ss_pred CCEEEEEEEECCE---EEEEEEEee
Q 013804 409 GDEVIVEVLRGDQ---KEKIPVKLE 430 (436)
Q Consensus 409 g~~v~l~v~R~g~---~~~~~v~~~ 430 (436)
|++++|+|.|+|+ .++++++..
T Consensus 148 g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 148 DSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp TCEEEEEEEETTEEEEEEEEEEECB
T ss_pred CCEEEEEEEeCCCCcceEEEEEEEc
Confidence 9999999999998 666666543
No 275
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.61 E-value=4.8e-08 Score=88.99 Aligned_cols=62 Identities=26% Similarity=0.411 Sum_probs=56.6
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEK 424 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 424 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|. +++++.+++.. .++.+.|+|.|+++.++
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccCC
Confidence 689999999999999999 999 9999999999999 99999999987 78999999999887643
No 276
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.61 E-value=9.1e-08 Score=87.10 Aligned_cols=73 Identities=25% Similarity=0.326 Sum_probs=59.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~ 408 (436)
..||+.+...... ..|++|..|.+++||+++ ||++ ||+|++|||++|.++ .++..++.. .
T Consensus 19 ~~lG~~i~~~~~~----~~~~~V~~v~~~spA~~aggl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (200)
T 2qt5_A 19 TTLGLTVSGGIDK----DGKPRVSNLRQGGIAARSDQLDV-----------GDYIKAVNGINLAKFRHDEIISLLKN--V 81 (200)
T ss_dssp CCCCEEEECCTTS----SSCSEEEEECTTSHHHHTTSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--C
T ss_pred CCCCEEEecccCC----CCCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 4577777542211 157999999999999999 9999 999999999999999 888877764 5
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|+++.++|.|+++
T Consensus 82 g~~v~l~v~R~~~ 94 (200)
T 2qt5_A 82 GERVVLEVEYELP 94 (200)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEeccCC
Confidence 8899999999763
No 277
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.60 E-value=8e-08 Score=87.02 Aligned_cols=68 Identities=31% Similarity=0.476 Sum_probs=58.6
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEE---CCEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLR---GDQKEK 424 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R---~g~~~~ 424 (436)
.|++|..|.+++||++ ||++ ||+|++|||++|.+. .++..++.. .++.+.|+|.| +|+..+
T Consensus 24 ~g~~V~~v~~~spA~~-gl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~G~~~~ 89 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREVGNGAKQE 89 (195)
T ss_dssp CSEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEECSSSCEEE
T ss_pred CCEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEcCCCCCCce
Confidence 6999999999999999 9999 999999999999985 455555554 46799999999 899988
Q ss_pred EEEEeec
Q 013804 425 IPVKLEP 431 (436)
Q Consensus 425 ~~v~~~~ 431 (436)
+++++..
T Consensus 90 ~~v~~~~ 96 (195)
T 2qbw_A 90 IRVRVEK 96 (195)
T ss_dssp EEEEEEC
T ss_pred eEeEeec
Confidence 8888763
No 278
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.60 E-value=9.8e-08 Score=76.17 Aligned_cols=57 Identities=30% Similarity=0.446 Sum_probs=49.8
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.|++|..|.+++||++ ||++ ||+|++|||++|.+ +.++..++.. .|++++|+|.|+.
T Consensus 35 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREV 93 (95)
T ss_dssp CCEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEEEEC
T ss_pred CCEEEEEECCCCchhh-CCCC-----------CCEEEEECCEEcCCCCHHHHHHHhhc--CCCeEEEEEEeCC
Confidence 6999999999999999 9999 99999999999988 5566666653 6899999999964
No 279
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.60 E-value=1.3e-08 Score=85.00 Aligned_cols=78 Identities=28% Similarity=0.316 Sum_probs=61.4
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ...|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. ..
T Consensus 27 ~~lG~~i~g~~~~---~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~-~~ 91 (119)
T 1x6d_A 27 AGLGFSLAGGADL---ENKVITVHRVFPNGLASQEGTIQK-----------GNEVLSINGKSLKGTTHHDALAILRQ-AR 91 (119)
T ss_dssp SCCSEEEECCSSS---SCSSCEEEEECSSSHHHHHTSSCT-----------TCBCCEETTEECSSCCHHHHHHHHHH-TT
T ss_pred CccCEEEeCCCCC---CCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 3567776532110 12589999999999999999 999 9999999999999 68888888876 35
Q ss_pred CCEEEEEEEECCEEEE
Q 013804 409 GDEVIVEVLRGDQKEK 424 (436)
Q Consensus 409 g~~v~l~v~R~g~~~~ 424 (436)
+..+.+++.|+++.++
T Consensus 92 ~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 92 EPRQAVIVTRKLTPEA 107 (119)
T ss_dssp SSSEEEEEEECCCSSS
T ss_pred CCeEEEEEEcCCCccc
Confidence 6667789999987644
No 280
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.59 E-value=5.3e-08 Score=81.89 Aligned_cols=75 Identities=20% Similarity=0.375 Sum_probs=59.3
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..||+.+...... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .
T Consensus 36 ~glG~~l~~~~~~---~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~~--~ 99 (124)
T 2daz_A 36 NGLGLSLAGNKDR---SRMSIFVVGINPEGPAAADGRMRI-----------GDELLEINNQILYGRSHQNASAIIKT--A 99 (124)
T ss_dssp SCCCEEEECBSST---TSCCEEEEEECTTSHHHHHTCCCT-----------TCEECEESSCBCTTSCHHHHHHHHHH--S
T ss_pred CccCEEEeccCCC---CcCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 4678877642211 12589999999999999999 999 99999999999976 6666666665 4
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
++++.|+|.|+++.
T Consensus 100 ~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 100 PSKVKLVFIRNEDA 113 (124)
T ss_dssp CSEEEEEEEECTTH
T ss_pred CCeEEEEEEeCCCc
Confidence 67999999998764
No 281
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=4.6e-08 Score=81.20 Aligned_cols=70 Identities=24% Similarity=0.297 Sum_probs=56.9
Q ss_pred cceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCE
Q 013804 334 LGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDE 411 (436)
Q Consensus 334 lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~ 411 (436)
+|+.+...... +..|++|..|.+++||+++||++ ||+|++|||++|.+ +.++.+++.. +.
T Consensus 31 ~G~~v~~~~~~---~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~----~~ 92 (114)
T 2d8i_A 31 YGFSLSSVEED---GIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ----PS 92 (114)
T ss_dssp CCCEEEEEEET---TEEEEEEEECCTTSSHHHHTCCT-----------TCCEEEESSCBGGGCCHHHHHHHHTS----SE
T ss_pred cCEEEEecCcC---CcCCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhC----Cc
Confidence 58877642211 33689999999999999999999 99999999999998 5688887764 48
Q ss_pred EEEEEEECCE
Q 013804 412 VIVEVLRGDQ 421 (436)
Q Consensus 412 v~l~v~R~g~ 421 (436)
+.|+|.|...
T Consensus 93 v~l~v~R~p~ 102 (114)
T 2d8i_A 93 LGLLVRTYPE 102 (114)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEECCC
Confidence 9999999643
No 282
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.58 E-value=3.8e-08 Score=80.97 Aligned_cols=76 Identities=21% Similarity=0.261 Sum_probs=61.5
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC--
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-- 407 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~-- 407 (436)
-+|+.+....... ...+++|..|.+++||+++| |++ ||+|++|||+++.+ ++++.++|....
T Consensus 26 glG~~i~gg~~~~--~~~~~~V~~v~~~s~A~~aG~l~~-----------GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 26 GLGLKILGGINRN--EGPLVYIHEVIPGGDCYKDGRLKP-----------GDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp CCCEEEEECSSSS--SCSSEEEEEECTTSHHHHHCSCCT-----------TCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred ccCEEEEeccCCC--CCCCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 5788776321100 11479999999999999999 999 99999999999997 889999998743
Q ss_pred CCCEEEEEEEECCE
Q 013804 408 VGDEVIVEVLRGDQ 421 (436)
Q Consensus 408 ~g~~v~l~v~R~g~ 421 (436)
.+++++|+|.|+++
T Consensus 93 ~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 93 SESPWEIAFIRSGP 106 (109)
T ss_dssp SSSCEEEEEECCCC
T ss_pred CCceEEEEEEeCCC
Confidence 48899999999875
No 283
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.57 E-value=1.9e-07 Score=73.14 Aligned_cols=69 Identities=30% Similarity=0.433 Sum_probs=54.1
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g 409 (436)
.+|+.+...... ..+++|..|.+++||++ +||++ ||+|++|||+++. ++.++..++.. .+
T Consensus 15 ~lG~~i~~~~~~----~~~~~V~~V~~gspA~~~agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 77 (87)
T 4e34_A 15 GLGISITGGKEH----GVPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QR 77 (87)
T ss_dssp CCCEEEEEEGGG----TEEEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred cccEEEEccCCC----CCCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 567776532211 15799999999999999 79999 9999999999995 55788888875 56
Q ss_pred CEEEEEEEE
Q 013804 410 DEVIVEVLR 418 (436)
Q Consensus 410 ~~v~l~v~R 418 (436)
+++.|+|.+
T Consensus 78 ~~v~l~v~~ 86 (87)
T 4e34_A 78 GEIEFEVVY 86 (87)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 788888764
No 284
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.56 E-value=9.6e-08 Score=77.97 Aligned_cols=59 Identities=20% Similarity=0.319 Sum_probs=49.6
Q ss_pred cceEEEecCCCCcccccC--cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC--CCEEEEEEEEC
Q 013804 350 SGVLVLDAPPNGPAGKAG--LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV--GDEVIVEVLRG 419 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag--l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~--g~~v~l~v~R~ 419 (436)
.+++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 479999999999999999 999 999999999999965 567777765322 35899999885
No 285
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=2.4e-08 Score=83.37 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=60.8
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCccccc--CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA--GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a--gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~ 407 (436)
+.+|+.+...... ..|++|..|.+++||+++ ||++ ||+|++|||++|.+ +.++..++....
T Consensus 27 ~~~G~~l~gg~~~----~~~v~V~~V~~~spA~~a~gGL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 27 GRFGFNVKGGYDQ----KMPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECSSSTTTSSSSCCCT-----------TCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCcCEEEecccCC----CCCeEEEEECCCCHHHHhhcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4578877643211 148999999999999999 9999 99999999999986 567777776531
Q ss_pred C--CCEEEEEEEECCEEEEEE
Q 013804 408 V--GDEVIVEVLRGDQKEKIP 426 (436)
Q Consensus 408 ~--g~~v~l~v~R~g~~~~~~ 426 (436)
. ++++.|+|.|++.....+
T Consensus 92 ~~~~~~v~l~v~R~~~~~~~~ 112 (119)
T 2cs5_A 92 ERHSGELMLLVRPNAVYDVVE 112 (119)
T ss_dssp HCCSSCEEEEEECCCCCCCCC
T ss_pred ccCCCEEEEEEEcccccCccc
Confidence 1 358999999987654333
No 286
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.56 E-value=2.1e-07 Score=76.87 Aligned_cols=74 Identities=27% Similarity=0.336 Sum_probs=56.5
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
-+|+.+.... .|..|..+.+ +++.+||++ ||+|++|||++|.+ .+|+.++|.....|+
T Consensus 24 G~GFsI~~~~-------~g~~V~~I~~--~~~~aGL~~-----------GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~ 83 (113)
T 3soe_A 24 GFGFAIADSP-------TGQKVKMILD--SQWCQGLQK-----------GDIIKEIYHQNVQNLTHLQVVEVLKQFPVGA 83 (113)
T ss_dssp BSSEEEEEET-------TEEEEEEESC--GGGSTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTC
T ss_pred cccEEEeCCC-------CCcEEEEecC--hHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCC
Confidence 4666664321 3556777776 688899999 99999999999995 579999999877799
Q ss_pred EEEEEEEECCEEEEEE
Q 013804 411 EVIVEVLRGDQKEKIP 426 (436)
Q Consensus 411 ~v~l~v~R~g~~~~~~ 426 (436)
++.|+|.|+|....+.
T Consensus 84 ~v~L~V~R~g~~~p~~ 99 (113)
T 3soe_A 84 DVPLLILRGGPPSPTK 99 (113)
T ss_dssp EEEEEEEESSCC----
T ss_pred EEEEEEEECCccCccc
Confidence 9999999998754433
No 287
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.56 E-value=8.3e-08 Score=98.43 Aligned_cols=65 Identities=37% Similarity=0.483 Sum_probs=60.7
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 427 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (436)
.|++|.+|.++|||+++||++ ||+|++|||++|.+++|+.+++.. .++.+.|+|.|+|+.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~-----------GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRP-----------GDIIISANKKPVTDVKSLQTIAQE--KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHTTS--SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhc--CCCeEEEEEEECCEEEEEEe
Confidence 689999999999999999999 999999999999999999999987 57889999999999887765
No 288
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.54 E-value=2.2e-07 Score=75.40 Aligned_cols=74 Identities=28% Similarity=0.390 Sum_probs=57.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..|++|..|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.. .
T Consensus 21 ~~lG~~l~~g~~~----~~~~~V~~V~~~s~A~~a~gL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~ 83 (103)
T 2dc2_A 21 EGLGISITGGKEH----GVPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--Q 83 (103)
T ss_dssp SCCCEEEEEEGGG----TEEEEEEEECTTSHHHHHTCCCS-----------SEEEEEETTEESTTSCHHHHHHHHHH--C
T ss_pred CccCEEEEeccCC----CCCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 3567776542211 148999999999999995 9999 99999999999965 7888888876 4
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
+++++|+|.|....
T Consensus 84 ~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 84 RGEIEFEVVYVALE 97 (103)
T ss_dssp CSEEEEEEEECC--
T ss_pred CCcEEEEEEecCCc
Confidence 56899999997543
No 289
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=1.4e-07 Score=77.04 Aligned_cols=59 Identities=31% Similarity=0.499 Sum_probs=51.5
Q ss_pred cceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++ ||++ ||+|++|||++|.+ +.++..++.. .++++.|+|.|++.
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQI-----------HDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECCS
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCC
Confidence 69999999999999999 9999 99999999999976 5666677765 57889999999753
No 290
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.53 E-value=1.7e-07 Score=78.82 Aligned_cols=70 Identities=23% Similarity=0.428 Sum_probs=57.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~ 408 (436)
..+|+.+..... ...+++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .
T Consensus 31 ~~lG~~i~gg~~----~~~~~~V~~v~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~--~ 93 (125)
T 3hpk_A 31 NLIGISIGGGAQ----YCPCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQE--V 93 (125)
T ss_dssp SCCCEEEEECSS----CCSSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--S
T ss_pred CCcCEEEeccCC----CCCCEEEEEeCCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 457777654221 01579999999999999999 999 9999999999998 68899988887 3
Q ss_pred CCEEEEEEEE
Q 013804 409 GDEVIVEVLR 418 (436)
Q Consensus 409 g~~v~l~v~R 418 (436)
+++++++|.|
T Consensus 94 ~~~v~l~v~r 103 (125)
T 3hpk_A 94 KGEVTIHYNK 103 (125)
T ss_dssp CSEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 5569999998
No 291
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=6.5e-08 Score=77.57 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=50.1
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.+++|..|.+++||+ +||++ ||+|++|||++|.+ +.++...+.. .|++++|+|.|++
T Consensus 31 ~~~~V~~V~~~spA~-agL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFP-----------GDQILQMNNEPAEDLSWERAVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCT-----------TCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 589999999999996 99999 99999999999987 6666666665 6899999999986
No 292
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.51 E-value=1.5e-07 Score=76.25 Aligned_cols=57 Identities=30% Similarity=0.446 Sum_probs=50.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.|++|..|.+++||++ ||++ ||+|++|||++|.+ +.++..++.. .|++++|+|.|+.
T Consensus 43 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREV 101 (103)
T ss_dssp CSEECCCBSSSSTTSS-SCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--CCSEEEEEEECCC
T ss_pred CCEEEEEECCCCchHH-CCCC-----------CCEEEEECCEECCCCCHHHHHHHhhc--CCCeEEEEEEecC
Confidence 6999999999999999 9999 99999999999987 5666666653 6899999999973
No 293
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=9e-08 Score=78.00 Aligned_cols=73 Identities=26% Similarity=0.465 Sum_probs=58.2
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
..+|+.+.... +..|++|..|.+++||+++||++ ||+|++|||++|.+ +.++...+.. .+
T Consensus 19 ~~~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 80 (106)
T 2eei_A 19 GSYGFSLKTVQ-----GKKGVYMTDITPQGVAMRAGVLA-----------DDHLIEVNGENVEDASHEEVVEKVKK--SG 80 (106)
T ss_dssp SSCSCCEECCS-----SCCSCEECCCCTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHH--HC
T ss_pred CCCCEEEEecc-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 34677765321 12689999999999999999999 99999999999985 5677777765 47
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
+++.++|.|++..
T Consensus 81 ~~v~l~v~r~~~~ 93 (106)
T 2eei_A 81 SRVMFLLVDKETD 93 (106)
T ss_dssp SEEEEEECCTTTS
T ss_pred CeEEEEEEcCchh
Confidence 8999999997654
No 294
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.50 E-value=1.3e-07 Score=85.76 Aligned_cols=73 Identities=23% Similarity=0.378 Sum_probs=61.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+....... ...|++|..|.+++||+++| |++ ||+|++|||++|.+ ++++.+++... |
T Consensus 120 ~lG~~~~~~~~~~--~~~gv~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~ 184 (196)
T 1p1d_A 120 ELGITISSPSSRK--PGDPLVISDIKKGSVAHRTGTLEL-----------GDKLLAIDNIRLDSCSMEDAVQILQQC--E 184 (196)
T ss_dssp CCCCEEECSCSSS--TTCCCEEEECCSSSHHHHTSCCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHHC--T
T ss_pred CcCEEEECCCCCC--CCCCEEEEEECCCCcHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 4687776532111 12689999999999999999 999 99999999999999 99999999884 8
Q ss_pred CEEEEEEEECC
Q 013804 410 DEVIVEVLRGD 420 (436)
Q Consensus 410 ~~v~l~v~R~g 420 (436)
+.+.|+|.|++
T Consensus 185 ~~v~l~v~R~~ 195 (196)
T 1p1d_A 185 DLVKLKIRKDE 195 (196)
T ss_dssp TCEEEEEECCC
T ss_pred CEEEEEEEeCC
Confidence 99999999986
No 295
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.50 E-value=1.4e-07 Score=94.80 Aligned_cols=72 Identities=26% Similarity=0.391 Sum_probs=63.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.||+.+.... ..|++|..|.++|||+++||++ ||+|++|||++|.+ ++++..++....+|+
T Consensus 20 ~lG~~i~gg~------~~gi~V~~V~~gspA~~aGL~~-----------GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 20 SVGLRLAGGN------DVGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGE 82 (391)
T ss_dssp SCCEEEEEET------TTEEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceeEEEEecC------CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhhcCCC
Confidence 4888876422 1699999999999999999999 99999999999986 899999998767899
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
+++|+|.|+++
T Consensus 83 ~v~l~v~r~~~ 93 (391)
T 3tsz_A 83 EVTILAQKKKD 93 (391)
T ss_dssp EEEEEEEECHH
T ss_pred eEEEEEeeCCc
Confidence 99999999864
No 296
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.49 E-value=1e-07 Score=79.20 Aligned_cols=76 Identities=24% Similarity=0.329 Sum_probs=57.6
Q ss_pred ecceeeecchhhhhc--CccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 013804 333 ILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~--g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~ 408 (436)
.+|+.+........+ +..|++|..|.+++||+ +||++ ||+|++|||++|.++ .++..++.. .
T Consensus 27 glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~-----------GD~I~~Vng~~v~~~~~~~~~~~l~~--~ 92 (117)
T 2csj_A 27 GFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQE-----------NDRVVMVNGTPMEDVLHSFAVQQLRK--S 92 (117)
T ss_dssp TTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCT-----------TCEEEEESSCBCBTCCHHHHHHHHHH--S
T ss_pred ccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--C
Confidence 466666532111111 23689999999999997 99999 999999999999874 566666765 5
Q ss_pred CCEEEEEEEECCEE
Q 013804 409 GDEVIVEVLRGDQK 422 (436)
Q Consensus 409 g~~v~l~v~R~g~~ 422 (436)
|+++.|+|.|+++.
T Consensus 93 ~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 93 GKIAAIVVKRPRKV 106 (117)
T ss_dssp CSEEEEEEEEEEEC
T ss_pred CCeEEEEEEECCcc
Confidence 89999999997654
No 297
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.48 E-value=1.8e-07 Score=79.60 Aligned_cols=60 Identities=25% Similarity=0.379 Sum_probs=52.7
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.+++||+++||++ ||+|++|||++|.+ +.++...+.. .|+++.|+|.|.++.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCT-----------TCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCC
Confidence 489999999999999999999 99999999999984 6788888876 678999999987654
No 298
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.48 E-value=1.3e-07 Score=80.28 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=60.7
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g 409 (436)
.+|+.+....... .+-.+++|..|.+++||+++ ||++ ||+|++|||+.+.+ ++++.+++.. ..+
T Consensus 41 glG~~i~gg~~~~-~~~~~i~I~~V~~gs~A~~aggL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~ 107 (130)
T 1i16_A 41 GLGFSLEGGKGSL-HGDKPLTINRIFKGAASEQSETVQP-----------GDEILQLGGTAMQGLTRFEAWNIIKA-LPD 107 (130)
T ss_dssp STTEEEECCCCCS-SSCCCCEEEEECSSCCCSSSCCCCT-----------TCCEEECSSCBGGGSCHHHHHHHHHT-SCS
T ss_pred ccCEEEecCcCCC-CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CCC
Confidence 4777776422100 02258999999999999999 9999 99999999999987 6888888887 457
Q ss_pred CEEEEEEEECCEE
Q 013804 410 DEVIVEVLRGDQK 422 (436)
Q Consensus 410 ~~v~l~v~R~g~~ 422 (436)
..+.++|.|++..
T Consensus 108 ~~v~l~v~r~~~~ 120 (130)
T 1i16_A 108 GPVTIVIRRKSLQ 120 (130)
T ss_dssp SEEEEEEEEESSC
T ss_pred ceEEEEEEeCCCC
Confidence 7899999997543
No 299
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.48 E-value=2.1e-07 Score=84.86 Aligned_cols=85 Identities=20% Similarity=0.317 Sum_probs=62.5
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC----HHHHHHHHhcC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN----GSDLYRILDQC 406 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s----~~dl~~~l~~~ 406 (436)
.-||+.+...... ..+ .|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++..
T Consensus 29 ~~lG~~i~~g~~~-~~~-~g~~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~~~- 94 (206)
T 3r0h_A 29 KPMGVIVCGGKNN-HVT-TGCVITHVYPEGQVAADKRLKI-----------FDHICDINGTPIHVGSMTTLKVHQLFHT- 94 (206)
T ss_dssp SCCCEEEECCSSS-SCC-SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECCGGGSCHHHHHHHHHS-
T ss_pred CCcCEEEecccCC-CCC-CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEEcCCCccCHHHHHHHHHh-
Confidence 4577776542211 111 689999999999999998 999 99999999999998 6677766665
Q ss_pred CCCCEEEEEEEECCEEE--EEEEEee
Q 013804 407 KVGDEVIVEVLRGDQKE--KIPVKLE 430 (436)
Q Consensus 407 ~~g~~v~l~v~R~g~~~--~~~v~~~ 430 (436)
..+.++.++|.|+++.. .+++.+.
T Consensus 95 ~~~~~v~l~v~R~~~~~~~~~~v~l~ 120 (206)
T 3r0h_A 95 TYEKAVTLTVFRADPPELEKFNVDLM 120 (206)
T ss_dssp CCSSEEEEEEECCSSCCEEEEEEEEE
T ss_pred cCCCceEEEEEecccCCCcEEEEEEe
Confidence 33445999999987643 4555544
No 300
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=3.6e-08 Score=81.23 Aligned_cols=59 Identities=29% Similarity=0.492 Sum_probs=53.4
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|. ++.++..++.. .++++.|+|.|+..
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRV-----------GLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCT-----------TCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEECCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 689999999999999999 999 9999999999999 68888888865 68999999999754
No 301
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.47 E-value=2.8e-07 Score=81.97 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=58.8
Q ss_pred ecceeeecchhhhh--cCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCC
Q 013804 333 ILGIKFAPDQSVEQ--LGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCK 407 (436)
Q Consensus 333 ~lGv~~~~~~~~~~--~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~ 407 (436)
.||+.+........ .+..|++|..|.+++||+++| |++ ||+|++|||+.| .++.++..+|..
T Consensus 92 glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~VNG~~v~~~~~~~~~~~l~~-- 158 (170)
T 3egg_C 92 GLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN-- 158 (170)
T ss_dssp BSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTBCHHHHHHHHHH--
T ss_pred eEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 57877765110111 123689999999999999999 999 999999999999 567788888876
Q ss_pred CCCEEEEEEEEC
Q 013804 408 VGDEVIVEVLRG 419 (436)
Q Consensus 408 ~g~~v~l~v~R~ 419 (436)
.|++|.|+|.|+
T Consensus 159 ~g~~v~L~V~R~ 170 (170)
T 3egg_C 159 TKGRVRFMIGRE 170 (170)
T ss_dssp CCSEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 678999999995
No 302
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.46 E-value=3.9e-08 Score=82.08 Aligned_cols=73 Identities=25% Similarity=0.283 Sum_probs=57.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCccccc-CcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCC--
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-- 407 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~a-gl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~-- 407 (436)
.+|+.+...... ....++|..|.+++||+++ ||++ ||+|++|||+++.+ ++++.++|....
T Consensus 29 glG~~i~gg~~~---~~~~i~I~~V~~gspA~~aggL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 29 SLDLALEGGVDS---PVGKVVVSAVYEGGAAERHGGVVK-----------GDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CCCCEEEEBTTS---SSCSEEEEECCTTSHHHHHCSSCT-----------TCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred ccCEEEEcccCC---CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 577776532111 1135899999999999999 9999 99999999999997 778888887542
Q ss_pred CCCEEEEEEEEC
Q 013804 408 VGDEVIVEVLRG 419 (436)
Q Consensus 408 ~g~~v~l~v~R~ 419 (436)
.|++++|+|.|.
T Consensus 95 ~g~~v~l~v~r~ 106 (118)
T 1v6b_A 95 GGDWIDLVVAVC 106 (118)
T ss_dssp TCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 389999999994
No 303
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.44 E-value=1.6e-07 Score=78.02 Aligned_cols=59 Identities=27% Similarity=0.455 Sum_probs=51.6
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 421 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R~g~ 421 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|.+ +.++..++.. .|+++.|+|.|.++
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKT-----------GDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 699999999999999999 999 99999999999976 6677777765 57899999998654
No 304
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.41 E-value=1.9e-05 Score=72.35 Aligned_cols=172 Identities=15% Similarity=0.247 Sum_probs=108.0
Q ss_pred HhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCC-CeEEEEecCCcEEeeE-----EEEEcC
Q 013804 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQ 197 (436)
Q Consensus 124 ~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d~ 197 (436)
-+...|+.++...... ...--|+... .||+|++|.++.. ..++|+...|. |... -+..-+
T Consensus 21 ~Ia~~ic~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~~nnG~L~I~s~hG~-f~v~nt~~lki~~i~ 86 (229)
T 1lvm_A 21 PISSTICHLTNESDGH-----------TTSLYGIGFG--PFIITNKHLFRRNNGTLLVQSLHGV-FKVKNTTTLQQHLID 86 (229)
T ss_dssp HHHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGGCCSSEEEEEETTEE-EEESCGGGSEEEECT
T ss_pred hhheEEEEEEeccCCc-----------eEEEEEEeEC--CEEEeChhhhccCCCcEEEEeCCCe-EEeCCCCceeeEEeC
Confidence 3456688887643221 1233466675 3999999999865 67888887663 3221 344557
Q ss_pred CCCeEEEEEcCCCCCCcceecC-CCCCCCCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCC
Q 013804 198 DKDVAVLRIDAPKDKLRPIPIG-VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (436)
Q Consensus 198 ~~DlAlLkv~~~~~~~~~~~l~-~~~~~~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~ 276 (436)
..||.++|+.. ++||.+-. .-..+..||.|+++|.-+..... .-.|+......... + ..+-..-.....
T Consensus 87 g~DiiiIrmPk---DfpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~--~s~vSesS~i~p~~--~---~~fWkHwIsT~~ 156 (229)
T 1lvm_A 87 GRDMIIIRMPK---DFPPFPQKLKFREPQREERICLVTTNFQTKSM--SSMVSDTSCTFPSS--D---GIFWKHWIQTKD 156 (229)
T ss_dssp TSSCEEEECCT---TSCCCCSCCCBCCCCTTCEEEEEEEECSSSSC--EEEECCCEECEEET--T---TTEEEECBCCCT
T ss_pred CccEEEEeCCC---cCCCcccccccCCCCCCCeEEEEEeEeecCCc--cEEECCcceeEecC--C---CCEeEEEeeCCC
Confidence 88999999965 56665432 23668899999999965543322 22333222111111 1 234445556678
Q ss_pred CCCCCeEECC-CCcEEEEEeeeecCCCCCCcceeeeeeec-cchhhhhc
Q 013804 277 GNSGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQL 323 (436)
Q Consensus 277 G~SGGPlvd~-~G~VVGI~s~~~~~~~~~~~~~~aIP~~~-i~~~l~~l 323 (436)
|+=|.|+|+. +|.+|||++..... ...+|+.|+.. +.++++..
T Consensus 157 G~CGlPlVs~~Dg~IVGiHsl~~~~----~~~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 157 GQCGSPLVSTRDGFIVGIHSASNFT----NTNNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp TCTTCEEEETTTCCEEEEEEEEETT----SCSEEEEECCTTHHHHHHCG
T ss_pred CcCCCcEEECCCCcEEEEEcccccC----CCeEEEeCCCHHHHHHHhcc
Confidence 9999999984 99999999987653 23578877743 33556554
No 305
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=1.2e-07 Score=78.15 Aligned_cols=71 Identities=28% Similarity=0.377 Sum_probs=57.3
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
.+|+.+..... ..|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .+
T Consensus 27 glG~~l~~~~~-----~~gv~V~~V~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~~~~--~~ 88 (113)
T 1um7_A 27 GLGFNIVGGED-----GEGIFVSFILAGGPADLSGELRR-----------GDRILSVNGVNLRNATHEQAAAALKR--AG 88 (113)
T ss_dssp CSSBCCBCCST-----TCCCBCCCBCSSSHHHHTTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHS--CC
T ss_pred cccEEEEeccC-----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 36777654221 2689999999999999999 999 999999999999987 566666654 68
Q ss_pred CEEEEEEEECCE
Q 013804 410 DEVIVEVLRGDQ 421 (436)
Q Consensus 410 ~~v~l~v~R~g~ 421 (436)
+.+.|+|.|+++
T Consensus 89 ~~v~l~v~r~~~ 100 (113)
T 1um7_A 89 QSVTIVAQYRPE 100 (113)
T ss_dssp SEEEEEEECCHH
T ss_pred CcEEEEEEECcc
Confidence 899999999764
No 306
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.39 E-value=3.8e-07 Score=93.35 Aligned_cols=72 Identities=26% Similarity=0.391 Sum_probs=62.2
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~ 410 (436)
.||+.+.... ..|++|..|.+++||+++||++ ||+|++|||++|.+ .+++..+|....+|+
T Consensus 12 ~lG~~i~gg~------~~Gi~V~~V~~gspA~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 12 SVGLRLAGGN------DVGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp SCCEEEEEET------TTEEEEEEECSSSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ccceEEEccC------cCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 4666664321 1689999999999999999999 99999999999987 899999999877899
Q ss_pred EEEEEEEECCE
Q 013804 411 EVIVEVLRGDQ 421 (436)
Q Consensus 411 ~v~l~v~R~g~ 421 (436)
+++|+|.|+++
T Consensus 75 ~v~L~V~r~g~ 85 (468)
T 3shw_A 75 EVTILAQKKKD 85 (468)
T ss_dssp EEEEEEEECHH
T ss_pred EEEEEEEECCc
Confidence 99999999764
No 307
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.38 E-value=2.3e-07 Score=75.37 Aligned_cols=54 Identities=20% Similarity=0.354 Sum_probs=48.9
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEV 416 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v 416 (436)
.|++|..|.+++||+++||++ ||+|++|||++|. +++|+.+++... . ++++|+|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~-~-~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQA-----------GDVLANINGVSTEGFTYKQVVDLIRSS-G-NLLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCHHHHHHHHHHT-T-TEEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhC-C-CcEEEEE
Confidence 689999999999999999999 9999999999999 889999999884 3 4787765
No 308
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=2.6e-07 Score=75.11 Aligned_cols=75 Identities=23% Similarity=0.258 Sum_probs=58.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcC---
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC--- 406 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~--- 406 (436)
.+|+.+..... .+..+++|..|.+++||+++| |++ ||.|++|||+++.+ ++|+.++|...
T Consensus 18 glG~~i~gg~~---~~~~~~~I~~v~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 18 TLGIAIEGGAN---TRQPLPRIVTIQRGGSAHNCGQLKV-----------GHVILEVNGLTLRGKEHREAARIIAEAFKT 83 (103)
T ss_dssp SCCEEEECBTT---SSCSSCEEEEECTTSHHHHHCSSCT-----------TCBCCEETTEECTTCBHHHHHHHHHHHHHC
T ss_pred cCCeEEECCCC---CCCCcEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhccc
Confidence 47777654221 111345899999999999999 999 99999999999976 88988888752
Q ss_pred CCCCEEEEEEEECCE
Q 013804 407 KVGDEVIVEVLRGDQ 421 (436)
Q Consensus 407 ~~g~~v~l~v~R~g~ 421 (436)
..++.++++|.|.++
T Consensus 84 ~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 84 KDRDYIDFLVTEFNS 98 (103)
T ss_dssp SSCSEEEEEECCCCC
T ss_pred CCCCeEEEEEEEccc
Confidence 357899999999764
No 309
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.37 E-value=4.6e-07 Score=82.63 Aligned_cols=68 Identities=26% Similarity=0.391 Sum_probs=56.6
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
.+|+.+.... .|++|.+|.++++|+++| |++ ||+|++|||++|.++ .++..++.. .+
T Consensus 126 ~lG~~~~~~~-------~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~ 185 (206)
T 3r0h_A 126 ELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFKG--AN 185 (206)
T ss_dssp CCCEEEEECS-------SCEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CC
T ss_pred ccCeEEEcCC-------ceEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 4677765322 589999999999999999 999 999999999999965 777777765 56
Q ss_pred CEEEEEEEECC
Q 013804 410 DEVIVEVLRGD 420 (436)
Q Consensus 410 ~~v~l~v~R~g 420 (436)
+.+.|+|.|..
T Consensus 186 ~~v~L~V~R~~ 196 (206)
T 3r0h_A 186 GKVSMEVTRPK 196 (206)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 78999999953
No 310
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.31 E-value=1.1e-07 Score=87.97 Aligned_cols=73 Identities=26% Similarity=0.405 Sum_probs=62.0
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGD 410 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~ 410 (436)
.+|+.+.... +..|++|..|.+++||+++||++ ||+|++|||++|. ++.++..++... |+
T Consensus 21 glG~~l~~~~-----~~~gv~V~~V~~gSpA~~aGL~~-----------GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~ 82 (216)
T 2krg_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG--GD 82 (216)
T ss_dssp SSCEEECCCS-----SSCSCBEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCTHHHHHHHHHH--CS
T ss_pred CceEEEEecC-----CCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhc--CC
Confidence 4777765432 12489999999999999999999 9999999999999 999999998874 78
Q ss_pred EE-EEEEEECCEEE
Q 013804 411 EV-IVEVLRGDQKE 423 (436)
Q Consensus 411 ~v-~l~v~R~g~~~ 423 (436)
++ .++|.|+|+..
T Consensus 83 ~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 83 ETKLLVVDRETDEF 96 (216)
T ss_dssp EEEEEECCHHHHHH
T ss_pred eEEEEEEEECCEEE
Confidence 89 99999988765
No 311
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.25 E-value=1.7e-06 Score=67.24 Aligned_cols=53 Identities=25% Similarity=0.418 Sum_probs=45.9
Q ss_pred EEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEE
Q 013804 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLR 418 (436)
Q Consensus 353 ~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~g~~v~l~v~R 418 (436)
.|..+.+++||+++||++ ||+|++|||+.|.. .+++.++|.. .|++|+|+|..
T Consensus 26 ~I~~v~~gspA~~aGl~~-----------GD~Il~VNG~~v~~~~~~evv~llr~--~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKDSQIADILST--SGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhc--CCCEEEEEEEe
Confidence 378899999999999999 99999999999964 5688888874 78899999864
No 312
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.22 E-value=5e-07 Score=90.87 Aligned_cols=83 Identities=23% Similarity=0.307 Sum_probs=62.9
Q ss_pred ecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 013804 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (436)
Q Consensus 333 ~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g 409 (436)
.||+.+...... ....|++|..|.+++||+++| |++ ||+|++|||++|.+| .++..++.....+
T Consensus 217 ~lG~~i~~~~~g--~~~~g~~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 283 (388)
T 3suz_A 217 ILGVVVVESGWG--SILPTVILANMMNGGPAARSGKLSI-----------GDQIMSINGTSLVGLPLATCQGIIKGLKNQ 283 (388)
T ss_dssp CCCCCCBCC-----CCSCCCBCCCCCCSSHHHHTCCCCT-----------TCEEEEETTEECSSCCSTTHHHHTTTCTTC
T ss_pred ceeEEEEecCCC--CcCCCEEEEeeCCCCHHHHcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhccCC
Confidence 577766542100 011468999999999999999 999 999999999999998 7888888876677
Q ss_pred CEEEEEEEECCEEEEEEEE
Q 013804 410 DEVIVEVLRGDQKEKIPVK 428 (436)
Q Consensus 410 ~~v~l~v~R~g~~~~~~v~ 428 (436)
++++|+|.|+++..++.+.
T Consensus 284 ~~v~l~v~r~~~~~~v~l~ 302 (388)
T 3suz_A 284 TQVKLNIVSCPPVTTVLIK 302 (388)
T ss_dssp SCEEEEEEECCSCC-----
T ss_pred CccccccccccccceeeEe
Confidence 8899999999877666653
No 313
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.53 E-value=1.6e-07 Score=77.66 Aligned_cols=55 Identities=33% Similarity=0.523 Sum_probs=45.9
Q ss_pred cceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVL 417 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V--~s~~dl~~~l~~~~~g~~v~l~v~ 417 (436)
.|++|..|.++|||++ +||++ ||+|++|||++| .++.++..++.. .+++++|+|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 110 (112)
Confidence 4799999999999999 99999 999999999999 457777777764 4455777664
No 314
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.16 E-value=1.4e-06 Score=82.75 Aligned_cols=73 Identities=27% Similarity=0.342 Sum_probs=58.9
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccc-cCcccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~-agl~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
..+|+.+...... ..|++|..|.+++||++ +||++ ||+|++|||++|.+ ..++..++.. .
T Consensus 89 ~glGf~I~gg~d~----~~gi~V~~V~~gspA~~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~v~~l~~--~ 151 (263)
T 1z87_A 89 GGLGISIKGGREN----KMPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--T 151 (263)
T ss_dssp CCCCCEEEEETTT----TEEEEEEECCTTSHHHHCTTCCS-----------SCEEEEESSCBCTTSCHHHHHHHHHH--C
T ss_pred CCEeEEEeeccCC----CCCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--C
Confidence 3577777542211 15899999999999999 79999 99999999999998 4778878876 4
Q ss_pred CCEEEEEEEECCE
Q 013804 409 GDEVIVEVLRGDQ 421 (436)
Q Consensus 409 g~~v~l~v~R~g~ 421 (436)
|++|+|+|.|.++
T Consensus 152 g~~V~L~V~R~~~ 164 (263)
T 1z87_A 152 GKEVVLEVKYMKE 164 (263)
T ss_dssp CSCCCEEEECCSS
T ss_pred CCeEEEEEEeCcc
Confidence 7889999999765
No 315
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.14 E-value=2.9e-07 Score=94.34 Aligned_cols=65 Identities=29% Similarity=0.471 Sum_probs=0.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 427 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 427 (436)
.|++|..|.+++||+++||++ ||+|++|||++|.+++|+.+++... ++ .+.|+|.|+|+.+++.+
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~-----------GDiI~~vng~~v~~~~~l~~~l~~~-~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKK-----------GDVIIGANQQAVKNIAELRKVLDSK-PS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHcC-CC-eEEEEEEECCEEEEEEe
Confidence 589999999999999999999 9999999999999999999998863 44 89999999998877654
No 316
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.11 E-value=1.1e-06 Score=88.62 Aligned_cols=58 Identities=22% Similarity=0.321 Sum_probs=50.6
Q ss_pred ceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 351 gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.++|..|.++|||++|||++ ||+|++|||++|.+++ +..++.. +|++++|+|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~-----------GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQR-----------GHWIMMMNGDYITKKV-ESELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCT-----------TCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEEccchh-HHHHhhC--CCCEEEEEEEeCCcc
Confidence 47899999999999999999 9999999999999985 6655654 889999999998754
No 317
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.00 E-value=2.2e-05 Score=62.45 Aligned_cols=71 Identities=20% Similarity=0.334 Sum_probs=58.0
Q ss_pred eecceeeecchhhhhcCccceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 013804 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (436)
Q Consensus 332 ~~lGv~~~~~~~~~~~g~~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s--~~dl~~~l~~~~~ 408 (436)
.-||+.+... +...++|..+.++++|++.| |++ ||.|++|||+.|.. -.|+.++|++.+.
T Consensus 16 ~~LG~tI~~~------g~g~~~I~rI~~gg~a~r~g~L~v-----------GD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 16 DSLGLTITDN------GVGYAFIKRIKDGGVIDSVKTICV-----------GDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp SCCCEEEECS------SSSCCEEEEECTTSHHHHCTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCceEEEEcC------CCCcEEEEEEcCCChHHhcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 3578887642 12457899999999999876 555 99999999999975 4699999999888
Q ss_pred CCEEEEEEEEC
Q 013804 409 GDEVIVEVLRG 419 (436)
Q Consensus 409 g~~v~l~v~R~ 419 (436)
|.+++|++.+-
T Consensus 79 g~~~~L~lv~p 89 (95)
T 3gge_A 79 EELFTMKLIEP 89 (95)
T ss_dssp TCEEEEEEEEE
T ss_pred CCEEEEEEECc
Confidence 99999998774
No 318
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.90 E-value=1.5e-05 Score=86.46 Aligned_cols=60 Identities=27% Similarity=0.335 Sum_probs=52.4
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.|++|..|.+++||+++| |++ ||+|++|||+.|.++ .++..++.. .|++|+|+|.|++..
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 151 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKE--AGSIVRLYVMRRKPP 151 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHhhc--cccccceEEEecccc
Confidence 689999999999999999 999 999999999999988 456655554 688999999998753
No 319
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.87 E-value=2.4e-05 Score=87.92 Aligned_cols=69 Identities=23% Similarity=0.436 Sum_probs=58.5
Q ss_pred cceEEEecCCC--------CcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECC-
Q 013804 350 SGVLVLDAPPN--------GPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGD- 420 (436)
Q Consensus 350 ~gv~V~~v~~~--------spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g- 420 (436)
++++|..+.++ +||+++|++ |+ ||+|++|||++|.++.++..++.. .+|++|+|+|.|+|
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~---------l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~v~r~~~ 816 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGID---------PT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIRLSGKGG 816 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCC---------CT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEEEECSSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCC---------cC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEEEECCCC
Confidence 58899999987 999998832 34 999999999999999999988887 68999999999987
Q ss_pred EEEEEEEEe
Q 013804 421 QKEKIPVKL 429 (436)
Q Consensus 421 ~~~~~~v~~ 429 (436)
+.++++++.
T Consensus 817 ~~~~~~~~~ 825 (1045)
T 1k32_A 817 DKRDLMIDI 825 (1045)
T ss_dssp CEEEEEEEC
T ss_pred ceEEEEEEE
Confidence 556677664
No 320
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.74 E-value=2.6e-05 Score=84.51 Aligned_cols=61 Identities=26% Similarity=0.288 Sum_probs=53.8
Q ss_pred cceEEEecCCCCcccccC-cccccccccCcccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEE
Q 013804 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKE 423 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~ag-l~~~~~~~~~~l~~GDiIl~vnG~~V~s~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 423 (436)
.|++|..|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .|+.+.|+|.|+|+..
T Consensus 184 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~V~R~g~~~ 247 (721)
T 2xkx_A 184 NSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAY 247 (721)
T ss_pred CceEEEEeCCCCchhhcCCCCC-----------CCEEEEECCeeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCccc
Confidence 699999999999999999 999 999999999999986 567766654 5789999999998764
No 321
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.74 E-value=2.6e-06 Score=75.13 Aligned_cols=55 Identities=18% Similarity=0.238 Sum_probs=41.9
Q ss_pred EEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 013804 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 429 (436)
Q Consensus 353 ~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 429 (436)
+|..+.+++||+++||++ ||+|++|||++|.++.. +++.+++.|+|+..++.+++
T Consensus 110 ~v~~v~~~s~a~~aGl~~-----------GD~I~~ing~~v~~~~~-----------~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKD-----------SQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECTTSHHHHTTCCS-----------SEEEEEETTEECTTCCH-----------HHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCC-----------CCEEEEECCEECCCCCh-----------HHHHHHHhhCCCEEEEEEEE
Confidence 789999999999999999 99999999999998732 22334444555555555544
No 322
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.60 E-value=0.0051 Score=55.06 Aligned_cols=147 Identities=16% Similarity=0.219 Sum_probs=82.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEE--EEcC---CCCeEEEEEcCCCCCCcce-ecCCCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV--GFDQ---DKDVAVLRIDAPKDKLRPI-PIGVSADL 224 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv--~~d~---~~DlAlLkv~~~~~~~~~~-~l~~~~~~ 224 (436)
.+.-||..|-.+ ++|...|...+ +.+.| +|+.+...-. -.+. ..||++++++... ++.-+ ++-.+...
T Consensus 22 ~G~ft~LgI~dr-~~lvP~Ha~~~-~ti~i---~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~-kFRDIr~~~~~~~~ 95 (190)
T 3zve_A 22 KGEFTMLGVHDR-VAVIPTHASVG-ETIYI---NDVETKVLDACALRDLTDTNLEITIVKLDRNQ-KFRDIRHFLPRYED 95 (190)
T ss_dssp TEEEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEECCSS-CBCCCGGGSCSSCC
T ss_pred CEEEEEEEEeCC-EEEEecCCCCC-cEEEE---CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCc-ccCchHHhccccCC
Confidence 345678888765 99999996643 33222 4444433211 1232 3599999998643 33332 11122222
Q ss_pred CCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCC
Q 013804 225 LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (436)
Q Consensus 225 ~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (436)
...+.+.++-.+.........+.+...... . ..+......+.++++..+|+=||||+ .+|+++||++++.
T Consensus 96 ~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i-~--l~g~~~~~~~~Y~~pT~~G~CG~~li-~~gkI~GiHvaG~------ 165 (190)
T 3zve_A 96 DYNDAVLSVHTSKFPNMYIPVGQVTNYGFL-N--LGGTPTHRILMYNFPTRAGQCGGVVT-TTGKVIGIHVGGN------ 165 (190)
T ss_dssp CEEEEEEEECSSSCSSEEEEEEEEEEEEEE-E--ETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC------
T ss_pred CCCCeEEEEECCCCcceEEecccceEecee-e--cCCCeeeeeEEEecCCCCCccCCeEE-ECCCEEEEEECcC------
Confidence 333444444332222222333444332221 1 12334467788999999999999999 5799999999872
Q ss_pred Ccceeeeee
Q 013804 305 SGVGFSIPV 313 (436)
Q Consensus 305 ~~~~~aIP~ 313 (436)
...+|+.++
T Consensus 166 G~~g~~~~l 174 (190)
T 3zve_A 166 GAQGFAAML 174 (190)
T ss_dssp SSCEEEEEC
T ss_pred CCceEehhh
Confidence 234666443
No 323
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.55 E-value=0.0039 Score=56.99 Aligned_cols=176 Identities=14% Similarity=0.132 Sum_probs=95.6
Q ss_pred HHHHHHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCC---eE--EEEecCCcEEeeE--
Q 013804 119 VRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DI--RVTFADQSAYDAK-- 191 (436)
Q Consensus 119 ~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i--~V~~~dg~~~~a~-- 191 (436)
.++...+.+-.|+|.....++. ....++|..|-.+ ..|...|...... .+ .+. -+|+.|+..
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~~---------~~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~-i~g~~~~~~~~ 71 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNGS---------VRWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFN-RGGTYYSISAG 71 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTSC---------CEEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEE-ETTEEEEEEGG
T ss_pred eeehhhhhccEEEEEEeCCCCC---------cceEEEEEEEcCC-EEEEecccCcccccccccceEEE-ECCEEEeeccc
Confidence 3455666677888887543322 1246899999866 9999999975322 22 233 366666543
Q ss_pred ---EEEEc-CCCCeEEEEEcCCCCCCccee--cCCCCC-CCCCC-EEEEEecCCCCCCceeEeE--E-eeeeeeeccCCC
Q 013804 192 ---IVGFD-QDKDVAVLRIDAPKDKLRPIP--IGVSAD-LLVGQ-KVYAIGNPFGLDHTLTTGV--I-SGLRREISSAAT 260 (436)
Q Consensus 192 ---vv~~d-~~~DlAlLkv~~~~~~~~~~~--l~~~~~-~~~G~-~V~~vG~p~g~~~~~~~G~--v-s~~~~~~~~~~~ 260 (436)
+...| ...||++++++... +++.+. +.+..+ ...++ .+.+++...+.+.....+. . ...... .....
T Consensus 72 ~v~~~~~d~~~~Dl~lv~Lp~~~-~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~ 149 (212)
T 2hal_A 72 NVVIQSLDVGFQDVVLMKVPTIP-KFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYV-HKKND 149 (212)
T ss_dssp GSEEECSSSSCCSEEEEECTTSC-CBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEE-EECTT
T ss_pred cceeEeccCCCceEEEEECCCCC-ccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEE-EecCC
Confidence 33333 46899999997522 333221 111111 22233 3333321111111111110 0 000000 00111
Q ss_pred CCCcc----cEEEEccccCCCCCCCeEECC----CCcEEEEEeeeecCCCCCCcceeeeee
Q 013804 261 GRPIQ----DVIQTDAAINPGNSGGPLLDS----SGSLIGINTAIYSPSGASSGVGFSIPV 313 (436)
Q Consensus 261 ~~~~~----~~i~~~~~i~~G~SGGPlvd~----~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (436)
+.... ..+.++++..+|+=||||+.. .|+++|||.++. .+.+||.++
T Consensus 150 G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~l 204 (212)
T 2hal_A 150 GTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLV 204 (212)
T ss_dssp SCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEEC
T ss_pred CcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEee
Confidence 22222 568889999999999999864 799999999973 246777664
No 324
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.53 E-value=0.023 Score=50.46 Aligned_cols=156 Identities=15% Similarity=0.225 Sum_probs=92.6
Q ss_pred CCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEE--EEc---CCCC
Q 013804 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV--GFD---QDKD 200 (436)
Q Consensus 126 ~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv--~~d---~~~D 200 (436)
++-++.|++. .+.-||+-|-.+ ..|-..|.-. .+.+ .-||+.++..-. -.+ ...|
T Consensus 16 ~~N~~~vtt~---------------~g~ft~LgI~dr-~~vvP~Ha~~-~~~i---~i~g~~~~v~d~~~L~~~~g~~~E 75 (187)
T 3qzr_A 16 RRNVRQVQTD---------------QGHFTMLGVRDR-LAVLPRHSQP-GKTI---WIEHKLVNVLDAVELVDEQGVNLA 75 (187)
T ss_dssp HHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEE---EETTEEEEEEEEEECCCTTCCCCS
T ss_pred HcCeEEEEEC---------------CCeEEEEEEeee-EEEEeCCCCC-CCEE---EECCEEEEeeeeEEEECCCCCEEE
Confidence 3458888772 344588889655 8999999843 3443 236766665321 112 2469
Q ss_pred eEEEEEcCCCCCCccee-cCCCCCCCCCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCC
Q 013804 201 VAVLRIDAPKDKLRPIP-IGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (436)
Q Consensus 201 lAlLkv~~~~~~~~~~~-l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 278 (436)
|++++++... ++.-++ +- .++...-..+..+-+...... .+..|.+..... +.. .+......+.++++...|+
T Consensus 76 lt~v~l~~~~-kfRDIrkfi-~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~-inl--sg~~t~r~l~Y~~pTk~G~ 150 (187)
T 3qzr_A 76 LTLITLDTNE-KFRDITKFI-PENISTASDATLVINTEHMPSMFVPVGDVVQYGF-LNL--SGKPTHRTMMYNFPTKAGQ 150 (187)
T ss_dssp EEEEEECSSC-CBCCCGGGS-CSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEE-EEE--TTEEEEEEEEESSCCCTTC
T ss_pred EEEEEcCCCc-cccchHHhC-ccCcCCCCceEEEEEcCCCcceEEEeccEEEece-EeC--CCCccccEEEECCCCCCCc
Confidence 9999998643 333332 21 112222223444444433322 334455544322 111 2233467889999999999
Q ss_pred CCCeEECCCCcEEEEEeeeecCCCCCCcceeeeee
Q 013804 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (436)
Q Consensus 279 SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (436)
=||+|+. .|+++|||+++ +...+|+.++
T Consensus 151 CGgvl~~-~gkIiGIHvaG------nG~~G~~a~L 178 (187)
T 3qzr_A 151 CGGVVTS-VGKIIGIHIGG------NGRQGFCAGL 178 (187)
T ss_dssp TTCEEEE-TTEEEEEEEEE------CSSCEEEEEC
T ss_pred cCCeEEe-cCcEEEEEECC------CCCcEEEEEe
Confidence 9999995 89999999987 2345676654
No 325
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.52 E-value=0.013 Score=52.16 Aligned_cols=146 Identities=15% Similarity=0.200 Sum_probs=83.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEE--EEEcC---CCCeEEEEEcCCCCCCccee-cCCCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKI--VGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADL 224 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~v--v~~d~---~~DlAlLkv~~~~~~~~~~~-l~~~~~~ 224 (436)
.+.-||.-|-++ +.|-..|... .+.+.| +|+.++..- .-.+. ..||++++++... ++.-++ +-.+. .
T Consensus 29 ~G~ft~LgI~d~-~~viP~Ha~p-~~~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~-kFRDIr~fi~~~-~ 101 (190)
T 4dcd_A 29 KGEFTMLGVHDN-VAILPTHASP-GESIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRNE-KFRDIRPHIPTQ-I 101 (190)
T ss_dssp TEEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSSC-CBCCCGGGSCSS-C
T ss_pred CeEEEEEEEECc-EEEEeCCCCC-CcEEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCc-cccchhHhcccc-C
Confidence 345688888755 9999999533 343332 466554431 12232 3599999998653 443332 21122 2
Q ss_pred CCCCEEEEEecCCCCCCc-eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCC
Q 013804 225 LVGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (436)
Q Consensus 225 ~~G~~V~~vG~p~g~~~~-~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~ 303 (436)
.....+..+=+-...+.. ...|.+...... . ..+......+.++++..+|+=||||+ .+|+++||+.++.
T Consensus 102 ~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i-~--lsg~~t~r~l~Y~~pT~~G~CGg~l~-~~gkIlGIHvaG~----- 172 (190)
T 4dcd_A 102 TETNDGVLIVNTSKYPNMYVPVGAVTEQGYL-N--LGGRQTARTLMYNFPTRAGQCGGVIT-CTGKVIGMHVGGN----- 172 (190)
T ss_dssp CCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-E--ETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC-----
T ss_pred CCCCceEEEEecCCCccEEEEeeeeEEeccc-c--CCCCcccceEEEccCCCCCccCCEEE-eCCCEEEEEECCC-----
Confidence 233344433232222322 333444333221 1 12344467889999999999999999 5789999999972
Q ss_pred CCcceeeeee
Q 013804 304 SSGVGFSIPV 313 (436)
Q Consensus 304 ~~~~~~aIP~ 313 (436)
...+|+.++
T Consensus 173 -G~~G~aa~L 181 (190)
T 4dcd_A 173 -GSHGFAAAL 181 (190)
T ss_dssp -SSCEEEEEC
T ss_pred -CCceEeeeh
Confidence 245666543
No 326
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.43 E-value=0.02 Score=50.84 Aligned_cols=157 Identities=15% Similarity=0.219 Sum_probs=91.0
Q ss_pred CCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEE--EEEcC---CCC
Q 013804 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKI--VGFDQ---DKD 200 (436)
Q Consensus 126 ~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~v--v~~d~---~~D 200 (436)
++-++.|++. .+.-||.-|-++ ..|-..|.-. .+.+ .-||+.++..- .-.|. ..|
T Consensus 14 k~N~~~vtT~---------------~G~ft~LgI~dr-~~vvPtHa~~-~~~i---~i~G~~~~v~d~~~L~~~~g~~lE 73 (191)
T 3q3y_A 14 KRNASTVKTE---------------YGEFTMLGIYDR-WAVLPRHAKP-GPTI---LMNDQEVGVLDAKELVDKDGTNLE 73 (191)
T ss_dssp HHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEE---EETTEEEEEEEEEEEECTTCCEEE
T ss_pred HcCeEEEEEC---------------CCcEEEEEEece-EEEEECCCCC-CCEE---EECCEEEEeeeEEEEEcCCCCEEE
Confidence 4458888772 344588888654 8888999833 3332 33677776521 11232 359
Q ss_pred eEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCC
Q 013804 201 VAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (436)
Q Consensus 201 lAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 279 (436)
|++|+++... ++.-++=--.+.........++-+...... .+..|.+..... +.. .+......+.++++...|+=
T Consensus 74 lt~v~l~~~~-kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~-inl--sg~~t~r~l~Y~~pTk~G~C 149 (191)
T 3q3y_A 74 LTLLKLNRNE-KFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGF-LNL--GGTPTKRMLVYNFPTRAGQC 149 (191)
T ss_dssp EEEEEEECSS-CBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEE-EEE--TTEEEEEEEEEESCCCTTCT
T ss_pred EEEEECCCCc-cccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcce-EeC--CCCcccCEEEecCCCCCCcc
Confidence 9999998643 443332111122222223344433333322 233455543322 111 12234678899999999999
Q ss_pred CCeEECCCCcEEEEEeeeecCCCCCCcceeeeee
Q 013804 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~ 313 (436)
||+|+. .|+++||++++ +...+|+.++
T Consensus 150 GgvL~~-~gkIiGIHvgG------nG~~Gfaa~L 176 (191)
T 3q3y_A 150 GGVLMS-TGKVLGIHVGG------NGHQGFSAAL 176 (191)
T ss_dssp TCEEEE-TTEEEEEEEEE------ETTEEEEEEC
T ss_pred CCEEEe-CCCEEEEEECC------CCcceEEeeh
Confidence 999995 79999999987 2345666543
No 327
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.41 E-value=0.00022 Score=54.46 Aligned_cols=47 Identities=13% Similarity=0.030 Sum_probs=32.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CcEEeeEEEEEcCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQDKD 200 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~~D 200 (436)
...|.|.+|+++ +|||+|||+.+.. .|+++. ++.+.++-+..+|++|
T Consensus 23 ~~~CgGslIs~~-~VLTAAHC~~~~~--~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~ 78 (80)
T 2pka_A 23 SFQCGGVLVNPK-WVLTAAHCKNDNY--EVWLGRHNLFENENTAQFFGVTADFPHPGFN 78 (80)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCSCC--EEEESCSBTTSCCTTCEEEEEEEEEECTTTT
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCc--EEEEeeeEcCCCCCCcEEEEEEEEEECcCCC
Confidence 467999999987 9999999997643 444432 2345555556666654
No 328
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.32 E-value=0.00035 Score=72.63 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=51.8
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQK 422 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~s~~dl~~~l~~~~~g~~v~l~v~R~g~~ 422 (436)
.||+|++|.+++++..+|+++ ||+|++|||++|+|..||.+++.+. .++.+.+++. +++.
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~-----------gdiI~~vNg~~V~s~~~l~~~l~~~-k~~~l~~~~~-~~~~ 474 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMN-----------NQQVLKFNGIPIRNIHHLAHLIDMC-KDKYLVFEFE-DNYV 474 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCC-----------SEEEEEETTEECCSHHHHHHHHHTC-CSSEEEEEET-TSCE
T ss_pred eEEEEEEecCCchhhhcCCCC-----------CCEEEeECCEEcCCHHHHHHHHHHc-CCCeEEEEEC-CCEE
Confidence 689999999999999999999 9999999999999999999999984 5666666643 3443
No 329
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.17 E-value=0.012 Score=52.29 Aligned_cols=144 Identities=22% Similarity=0.314 Sum_probs=82.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEee--EEEEEcC---CCCeEEEEEcCCCCCCccee-cCCCCCCC
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDA--KIVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLL 225 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a--~vv~~d~---~~DlAlLkv~~~~~~~~~~~-l~~~~~~~ 225 (436)
+.-||.-|-++ +.|...|...+. .+ .+ +|+.+.. ...-.|. ..||++++++... ++.-++ +-......
T Consensus 23 g~~t~LgI~d~-~~vvP~Ha~~~~-~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~-kfRDIrkfi~~~~~~ 96 (182)
T 2b0f_A 23 GEFTGLGIHDR-VCVIPTHAQPGD-DV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRNE-KFRDIRGFISEDLEG 96 (182)
T ss_dssp EEEEEEEEEBT-EEEEESTTCCCS-EE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCSS-CBCCGGGTBCSSCCC
T ss_pred ccEEEEEEeee-EEEEecCCCCcc-EE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcc-cccchHHhcCCCCCC
Confidence 34488888765 999999987653 33 22 5654332 1122232 4799999997643 332221 21111111
Q ss_pred CCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCC
Q 013804 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (436)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (436)
. +.+.++ +-.+.+. .+..|.+..... +. ..+......+.++++...|+=||||+. +|+++|||+++ +
T Consensus 97 ~-~~~lv~-n~~~~p~~~~~vg~~~~~g~-i~--l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG------~ 164 (182)
T 2b0f_A 97 V-DATLVV-HSNNFTNTILEVGPVTMAGL-IN--LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGG------N 164 (182)
T ss_dssp S-EEEEEE-ESSSCEEEEEEEEEEEEEEE-EE--ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE------E
T ss_pred C-ceEEEE-EcCCCceEEEEecceEEece-Ec--CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCC------C
Confidence 2 444444 2222222 224555443222 11 123334677889999999999999995 88999999997 2
Q ss_pred Ccceeeeee
Q 013804 305 SGVGFSIPV 313 (436)
Q Consensus 305 ~~~~~aIP~ 313 (436)
...+|+.++
T Consensus 165 G~~Gfaa~l 173 (182)
T 2b0f_A 165 GRQGFSAQL 173 (182)
T ss_dssp TTEEEEEEC
T ss_pred CCceEehhh
Confidence 346676554
No 330
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.00 E-value=0.066 Score=47.42 Aligned_cols=145 Identities=18% Similarity=0.212 Sum_probs=82.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeE--EEEEcC---CCCeEEEEEcCCCCCCccee-cCCCCCCC
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLL 225 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~~-l~~~~~~~ 225 (436)
+.-++.-|..+ ..|-..|...+. . +.. +|+.++.. ..-+|+ ..||++++++... +++-++ +-... ..
T Consensus 23 g~~t~Lgi~~~-~~lvP~Ha~~~~-~--i~i-~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~-kfrDi~kfip~~-~~ 95 (180)
T 1cqq_A 23 GKFTGLGVYDR-FVVVPTHADPGK-E--IQV-DGITTKVIDSYDLYNKNGIKLEITVLKLDRNE-KFRDIRRYIPNN-ED 95 (180)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCCS-E--EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEECSSC-CBCCGGGGSCSS-CC
T ss_pred CcEEEEEEeeE-EEEEccCcCccc-E--EEE-CCEEEEeccceEEEcCCCCeEEEEEEEcCCcc-ccCccHhhcCCC-cC
Confidence 34678888765 899999999874 2 222 55555433 223343 3599999997543 443332 21111 11
Q ss_pred CCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCC
Q 013804 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (436)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~ 304 (436)
.....+.+-+-..... .+..|.+..... +.. .+......+.++++..+|+=||+|+ .+|+++|||.++ +
T Consensus 96 ~~~~~~l~~n~~~~~~~~v~~g~~~~~g~-i~~--~g~~~~r~l~Y~~pT~~G~CGsvl~-~~gkIiGIHvAG------~ 165 (180)
T 1cqq_A 96 DYPNCNLALLANQPEPTIINVGDVVSYGN-ILL--SGNQTARMLKYSYPTKSGYCGGVLY-KIGQVLGIHVGG------N 165 (180)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEEECCC-EEE--TTEEECSEEEECCCCCTTCTTCEEE-ETTEEEEEEEEE------C
T ss_pred CCCceEEEEEcCCCceEEEEccceeeeee-Eec--CCcEeccEEEecCCCCCCcCCCeEE-ECCCEEEEEECC------C
Confidence 1112333333222222 244444432221 111 1233457889999999999999999 457999999997 2
Q ss_pred Ccceeeeee
Q 013804 305 SGVGFSIPV 313 (436)
Q Consensus 305 ~~~~~aIP~ 313 (436)
...+|+.++
T Consensus 166 G~~G~aa~l 174 (180)
T 1cqq_A 166 GRDGFSAML 174 (180)
T ss_dssp SSCEEEEEC
T ss_pred CCcEEEeee
Confidence 346677653
No 331
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.76 E-value=0.00022 Score=71.52 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=0.0
Q ss_pred cceEEEecCCCCcccccCcccccccccCcccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 013804 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGD 420 (436)
Q Consensus 350 ~gv~V~~v~~~spa~~agl~~~~~~~~~~l~~GDiIl~vnG~~V~--s~~dl~~~l~~~~~g~~v~l~v~R~g 420 (436)
.+.+|..|.+++||+++||++ ||+|++|||++|. +++++..++.. .++.+.|+|.+..
T Consensus 315 ~~g~I~~V~~gs~A~~aGL~~-----------GD~Il~VNg~~v~~~s~~~~~~~l~~--~~~~v~L~V~p~~ 374 (388)
T 3suz_A 315 QNGIICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATAHEKIVQALSN--SVGEIHMKTMPAA 374 (388)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ecCEEEEeecCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEecc
Confidence 344888999999999999999 9999999999997 46788877765 4677888887653
No 332
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=96.76 E-value=0.005 Score=56.11 Aligned_cols=139 Identities=17% Similarity=0.208 Sum_probs=78.5
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEe---eEEE----EEcCC---CCeEEEEEcCCCCCCcce-ecCCC
Q 013804 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYD---AKIV----GFDQD---KDVAVLRIDAPKDKLRPI-PIGVS 221 (436)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~---a~vv----~~d~~---~DlAlLkv~~~~~~~~~~-~l~~~ 221 (436)
.-+|..|-.+ ..|...|...+... .+.. +++.+. ..+. ..+.+ .||++++++... ++.-+ +.- .
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~-kfrdi~k~f-~ 105 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGN-KVRDITKHF-R 105 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSC-CBCCCGGGB-C
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCc-ccCchhhhc-c
Confidence 4566777655 89999999876322 2333 344442 1222 23333 799999997542 23222 111 1
Q ss_pred CCC--CCCCEEEEEecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEEC---CCCcEEEEEee
Q 013804 222 ADL--LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD---SSGSLIGINTA 296 (436)
Q Consensus 222 ~~~--~~G~~V~~vG~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd---~~G~VVGI~s~ 296 (436)
+++ ..++++..+-++...+.....|.+......+.. ..+......+.++++..+|+=||+|+- ..|+++|||++
T Consensus 106 ~~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~~-~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHva 184 (209)
T 2bhg_A 106 DTARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVS-MDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSA 184 (209)
T ss_dssp SSCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEE
T ss_pred cccccCCCCeEEEEeccCccCceeeeeeEEEccceeee-cCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEc
Confidence 222 345557666555433233334444322221111 122334678899999999999999963 37899999999
Q ss_pred e
Q 013804 297 I 297 (436)
Q Consensus 297 ~ 297 (436)
+
T Consensus 185 G 185 (209)
T 2bhg_A 185 G 185 (209)
T ss_dssp E
T ss_pred c
Confidence 7
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=95.84 E-value=0.49 Score=50.20 Aligned_cols=135 Identities=16% Similarity=0.199 Sum_probs=74.4
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeE--EEEEcC---CCCeEEEEEcCCCCCCccee-cCCCCCCC
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLL 225 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~~-l~~~~~~~ 225 (436)
+.-+|..|..+ .+|...|...+. .+.+ +|..+... ...++. ..||+++++.... .++.++ +-... ..
T Consensus 23 ~~~~~l~i~~~-~~l~p~H~~~~~-~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~-~frdi~~~~~~~-~~ 95 (644)
T 2ijd_1 23 GEFTMLGVHDN-VAILPTHASPGE-SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRNE-KFRDIRPHIPTQ-IT 95 (644)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSSC-CBCCCGGGSCSS-CC
T ss_pred cEEEEEEEece-EEEEccccCCCc-eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCCC-CcCChHHhccCC-cc
Confidence 34567777655 899999988653 3222 34333211 112333 3599999997432 333322 21111 11
Q ss_pred CCCEEEEEecCCCCCC-ceeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEeee
Q 013804 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (436)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (436)
......++-...+... .+..|.+..... +. ..+......+.++.+..+|+=|+||+. +|++||||+++
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~~~~g~-~~--~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG 164 (644)
T 2ijd_1 96 ETNDGVLIVNTSKYPNMYVPVGAVTEQGY-LN--LGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGG 164 (644)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEE-EC--CTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred CCCceEEEEcCCCCceEEEEeeeeeeccc-ee--cCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcC
Confidence 1222323212222222 223455443222 11 123344577889999999999999985 79999999987
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=95.74 E-value=0.0059 Score=48.32 Aligned_cols=52 Identities=31% Similarity=0.399 Sum_probs=35.4
Q ss_pred cccCCCCCCCeEECC-CC--cEEEEEeeeecCCCCCCcceeeeeeeccchhhhhcc
Q 013804 272 AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (436)
Q Consensus 272 ~~i~~G~SGGPlvd~-~G--~VVGI~s~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 324 (436)
...|.|+|||||+-. +| .++||+|++...+. ....+...-+....+|+++.+
T Consensus 40 ~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~-~~~p~vyt~V~~y~~WI~~~~ 94 (97)
T 1yph_E 40 VSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCS-TSTPGVYARVTALVNWVQQTL 94 (97)
T ss_dssp CBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCC-TTSEEEEEEHHHHHHHHHHHH
T ss_pred CCCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCC-CCCCeEEEEHHHhHHHHHHHH
Confidence 357899999999843 22 79999999764332 233455566667777777654
No 335
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=95.14 E-value=0.061 Score=59.23 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=52.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC-cEEeeEEEEE-cCCCCeEEEEEcCCCCCCcceecCCCC-------
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-SAYDAKIVGF-DQDKDVAVLRIDAPKDKLRPIPIGVSA------- 222 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-~~~~a~vv~~-d~~~DlAlLkv~~~~~~~~~~~l~~~~------- 222 (436)
..|.+.+|+++ ||+|.+|.... . .|.|.++ ..|.. +... .+..|+++.|++.......|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~--~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y~ 130 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T--NVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAYL 130 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C--EECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGGG
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c--eEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccccCcccccc
Confidence 55888999987 99999996443 3 3556554 35654 2222 234599999999766566666654321
Q ss_pred CCCCCCEEEEEecC
Q 013804 223 DLLVGQKVYAIGNP 236 (436)
Q Consensus 223 ~~~~G~~V~~vG~p 236 (436)
+.+.....+-+|..
T Consensus 131 d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 131 DKERYPVFYRLGSG 144 (1048)
T ss_dssp CTTTCCCEEEEECS
T ss_pred ccccCceEEEECCc
Confidence 23556667777755
No 336
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=92.36 E-value=0.76 Score=38.78 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=74.4
Q ss_pred CeEEEEEEEcCCCEEEecccccC-CCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCC-CCCcceecCCCCCCCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQ 228 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~~l~~~~~~~~G~ 228 (436)
-+.|-||-|+.. ..+|+-||+. +.+++. | .+...+..+..-+++.+++..+. .++.-..|... ...|+
T Consensus 14 fgsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G--~p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGt 83 (185)
T 4ash_A 14 FGTGWGFWVSGH-VFITAKHVAPPKGTEIF-----G--RKPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGV 83 (185)
T ss_dssp ETTEEEEESSSS-EEEEEGGGSCCTTCCBT-----T--BCTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTC
T ss_pred ccCceEEEEccc-EEEEEEeecCCCchhhc-----C--CccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCc
Confidence 467899999987 9999999994 433321 1 11223344556688888887643 34555556322 23477
Q ss_pred EEEEE-ecCCCCC--CceeEeEEeeeeeeeccCCCCCCcccEEE-------EccccCCCCCCCeEECCCC---cEEEEEe
Q 013804 229 KVYAI-GNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQ-------TDAAINPGNSGGPLLDSSG---SLIGINT 295 (436)
Q Consensus 229 ~V~~v-G~p~g~~--~~~~~G~vs~~~~~~~~~~~~~~~~~~i~-------~~~~i~~G~SGGPlvd~~G---~VVGI~s 295 (436)
-+.++ -.+.+.. ..+..|.+....-.-.. . ......+. .|-...||+-|+|-+-..| -|+||++
T Consensus 84 V~svlikR~sgeliPlavRmgt~as~kIqGk~--v-~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHt 160 (185)
T 4ash_A 84 VASVLVKRASGEMLALAVRMGSQAAIKIGSAV--V-HGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHV 160 (185)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEEEEEEETTEE--E-EEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCcceeEEEecceeeeEEeeeE--e-cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEE
Confidence 66553 3443331 13333443322111000 0 00011222 2334569999999985444 5999999
Q ss_pred eeec
Q 013804 296 AIYS 299 (436)
Q Consensus 296 ~~~~ 299 (436)
+...
T Consensus 161 Aatr 164 (185)
T 4ash_A 161 AATR 164 (185)
T ss_dssp EECS
T ss_pred eecc
Confidence 8643
No 337
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=90.71 E-value=0.63 Score=40.69 Aligned_cols=132 Identities=20% Similarity=0.250 Sum_probs=73.0
Q ss_pred HhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEE
Q 013804 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (436)
Q Consensus 124 ~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (436)
...+.|-+|.....-+ ....|-|+.- +|-.=|-+||-.++.- ..+++.+. ...-|-..|++
T Consensus 21 ~l~dGVYRI~~~gl~G----------~~Q~GVGv~k--~GVFHTMWHVTrGa~l----~~~g~~l~--P~WasV~~Dli- 81 (198)
T 3e90_B 21 DTTTGVYRIMTRGLLG----------SYQAGAGVMV--EGVFHTLWHTTKGAAL----MSGEGRLD--PYWGSVKEDRL- 81 (198)
T ss_dssp CCCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEEC--EEEEETTTTEE-
T ss_pred cCCCceEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEec--ceeehheecee-
Confidence 3467888887643221 1345777665 5899999999988652 12333332 22334455653
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCC
Q 013804 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (436)
Q Consensus 204 Lkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 280 (436)
..-.+ + +|. ..-.-.+.|.++-.+.+.... ...|+..-. . ...-.+.-...+|.||
T Consensus 82 -sYGG~---W---kL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~----------~--g~iGaV~lD~p~GTSG 140 (198)
T 3e90_B 82 -CYGGP---W---KLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTP----------E--GEIGAVTLDFPTGTSG 140 (198)
T ss_dssp -EESSS---C---CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCTTCTT
T ss_pred -ecCCc---c---cCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCCC
Confidence 23221 1 221 111123667777666554432 233333210 0 1223344455689999
Q ss_pred CeEECCCCcEEEEEe
Q 013804 281 GPLLDSSGSLIGINT 295 (436)
Q Consensus 281 GPlvd~~G~VVGI~s 295 (436)
+|++|.+|+|||+.-
T Consensus 141 SPIin~~G~VVGLYG 155 (198)
T 3e90_B 141 SPIVDKNGDVIGLYG 155 (198)
T ss_dssp CEEECTTCCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 999999999999954
No 338
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=90.51 E-value=0.17 Score=43.50 Aligned_cols=116 Identities=20% Similarity=0.264 Sum_probs=61.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEE
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKV 230 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V 230 (436)
...|-|+.- +|-.=|-+||-.++.- ..+++.+.. ..-|-..|++ ..-.+ + +|. ..-.-++.|
T Consensus 19 ~Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~~~P--~wa~V~~Dli--sYGG~---W---kL~--~kW~g~~eV 80 (172)
T 2fp7_B 19 YQAGAGVMV--EGVFHTLWHTTKGAAL----MSGEGRLDP--YWGSVKEDRL--CYGGP---W---KLQ--HKWNGHDEV 80 (172)
T ss_dssp CEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEECE--EEEETTTTEE--EESSS---C---CCC--CCCCSSSCE
T ss_pred ceeeeEEee--CCEEEeeeeecCCceE----EECCcEecc--eeehheecee--ecCCc---c---ccC--cccCCCceE
Confidence 346777766 5889999999988652 123333322 2334455653 22221 1 121 112234555
Q ss_pred EEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEee
Q 013804 231 YAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 231 ~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.++-.+.+.... ...|+..-. . .++-.+.-...+|.||+|++|.+|+|||+.--
T Consensus 81 ql~a~~Pgk~~~n~qt~Pg~f~~~--------~----GeigaI~lD~p~GtSGSPIin~~G~vVGLYGN 137 (172)
T 2fp7_B 81 QMIVVEPGKNVKNVQTKPGVFKTP--------E----GEIGAVTLDYPTGTSGSPIVDKNGDVIGLYGN 137 (172)
T ss_dssp EEEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCGGGTTCEEECTTSCEEEESCC
T ss_pred EEEEECCCCceEEEEccCceEecC--------C----CeEEEEECCCCCCCCCCceEccCCcEEEEecc
Confidence 555555443321 122222100 0 12233344566899999999999999999543
No 339
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=89.98 E-value=0.19 Score=43.67 Aligned_cols=133 Identities=21% Similarity=0.308 Sum_probs=70.7
Q ss_pred HHhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeE
Q 013804 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVA 202 (436)
Q Consensus 123 ~~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 202 (436)
....+.|-+|.....-+ ....|-|+.- +|-.=|-.||-.++.- ..+++.+.. ..-|-..|++
T Consensus 16 ~~l~dGvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~l~P--~wa~V~~Dli 77 (185)
T 2fom_B 16 AELEDGAYRIKQKGILG----------YSQIGAGVYK--EGTFHTMWHVTRGAVL----MHKGKRIEP--SWADVKKDLI 77 (185)
T ss_dssp --CCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEECE--EEEETTTTEE
T ss_pred ccCCCcEEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEecc--eeehheecee
Confidence 34678888887643221 1345777765 5889999999988652 123333322 2334455653
Q ss_pred EEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCC
Q 013804 203 VLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (436)
Q Consensus 203 lLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 279 (436)
..-.+ + +|. ..-.-++.|.++-.+-+.... ...|+..- ..+ ++-.+.-...+|.|
T Consensus 78 --sYGG~---W---kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~--------~~G----eigaI~lD~p~GTS 135 (185)
T 2fom_B 78 --SYGGG---W---KLE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKT--------NTG----TIGAVSLDFSPGTS 135 (185)
T ss_dssp --EESSS---C---CCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEC--------SSC----EEEEECCCSCGGGT
T ss_pred --ecCCc---c---cCc--cccCCCceEEEEEECCCCceEEEEcCCceeec--------CCC----eEEEEECCCCCCCC
Confidence 23221 1 121 011223555555555443321 12222210 011 23334445668999
Q ss_pred CCeEECCCCcEEEEEe
Q 013804 280 GGPLLDSSGSLIGINT 295 (436)
Q Consensus 280 GGPlvd~~G~VVGI~s 295 (436)
|+|++|.+|+|||+.-
T Consensus 136 GSPIin~~G~vvGLYG 151 (185)
T 2fom_B 136 GSPIVDKKGKVVGLYG 151 (185)
T ss_dssp TCEEECTTSCEEEETT
T ss_pred CCceEccCCcEEEEec
Confidence 9999999999999944
No 340
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=89.57 E-value=0.84 Score=41.05 Aligned_cols=114 Identities=20% Similarity=0.301 Sum_probs=62.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEE
Q 013804 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVY 231 (436)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~ 231 (436)
..|-|+.- +|-+=|-.||-.++.- ..+++.+. ...-|-..|++ ..-.+ + +|. . .=.-.+.|.
T Consensus 85 Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~~~--P~wa~V~~Dli--sYGG~---W---kL~-~-~W~g~~eVq 146 (236)
T 3lkw_A 85 QVGVGVFQ--EGVFHTMWHVTRGAVL----MYQGKRLE--PSWASVKKDLI--SYGGG---W---RFQ-G-SWNAGEEVQ 146 (236)
T ss_dssp EEEEEEEE--TTEEEECHHHHTTCCE----EETTEEEC--EEEEETTTTEE--EESSS---C---CCC-C-CCCTTCCEE
T ss_pred eeeeEEee--CCEEEEeeeecCcceE----EECCcEec--ceeehheecee--ecCCC---c---cCC-c-ccCCCceEE
Confidence 45777665 5899999999988652 12333332 22334455653 23221 1 221 1 111235666
Q ss_pred EEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCCeEECCCCcEEEEEe
Q 013804 232 AIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINT 295 (436)
Q Consensus 232 ~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s 295 (436)
++-++.+.... ...|...-. . ...-.+.-...+|.||+|++|.+|+|||+.-
T Consensus 147 v~A~~Pg~~~~~~qt~PG~~~~~--------~----g~igav~lD~p~GTSGSPIin~~G~VvGLYG 201 (236)
T 3lkw_A 147 VIAVEPGKNPKNVQTAPGTFKTP--------E----GEVGAIALDFKPGTAGSPIVNREGKIVGLYG 201 (236)
T ss_dssp EEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCTTCTTCEEECTTSCEEEESC
T ss_pred EEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCCCceecCCCcEEEEec
Confidence 66666554432 233333210 0 1223344455689999999999999999954
No 341
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=89.46 E-value=0.32 Score=42.13 Aligned_cols=133 Identities=19% Similarity=0.219 Sum_probs=71.8
Q ss_pred hCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEE
Q 013804 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVL 204 (436)
Q Consensus 125 ~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlL 204 (436)
..+.|-+|.....-+ ....|-|+.- +|-.=|-+||-.++.- ..+++.+.. ..-|-..|++
T Consensus 17 l~dGvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~L----~~~g~~l~P--~wasV~~Dli-- 76 (185)
T 2ggv_B 17 TTTGVYRIMTRGLLG----------SYQAGAGVMV--EGVFHTLWATTKGAAL----MSGEGRLDP--YWGSVKEDRL-- 76 (185)
T ss_dssp CCSEEEEEEEECSSS----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEECE--EEEETTTTEE--
T ss_pred CCCcEEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEecc--eeehhhccee--
Confidence 467788886643211 1345777766 5889999999988652 123333322 2334455653
Q ss_pred EEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCC
Q 013804 205 RIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGG 281 (436)
Q Consensus 205 kv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGG 281 (436)
..-.+ + +|. ..-.-++.|.++-.+.+.... ...|+..-. . .++-.+.-.+.+|.||+
T Consensus 77 sYGG~---W---kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~--------~----GeigAI~lD~p~GTSGS 136 (185)
T 2ggv_B 77 CYGGP---W---QLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP--------E----GEIGAVTLDFPTGTSGS 136 (185)
T ss_dssp EESSS---C---CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCGGGTTC
T ss_pred ecCCc---c---cCc--cccCCCceEEEEEECCCCceEEEEccCceEecC--------C----CeEEEEECCCCCCCCCC
Confidence 23221 1 121 112234555555555443321 122222100 0 12233344566899999
Q ss_pred eEECCCCcEEEEEeee
Q 013804 282 PLLDSSGSLIGINTAI 297 (436)
Q Consensus 282 Plvd~~G~VVGI~s~~ 297 (436)
|++|.+|+|||+.--+
T Consensus 137 PIin~~G~vvGLYGNG 152 (185)
T 2ggv_B 137 PIVDKNGDVIGLYGNG 152 (185)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred ceEcCCCcEEEEecce
Confidence 9999999999997654
No 342
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=89.33 E-value=0.25 Score=43.01 Aligned_cols=133 Identities=20% Similarity=0.267 Sum_probs=72.8
Q ss_pred HhCCceEEEEEeeeccCccccccccCcCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEE
Q 013804 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (436)
Q Consensus 124 ~~~~sVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (436)
...+.|-+|.....-. ....|-|+.- +|-+=|-+||-.++.- ..+++.+. ...-|-..|++
T Consensus 26 ~~~dGVYRI~~~gl~G----------~~Q~GVGv~k--~GVFHTMWHVTrGa~l----~~~g~~l~--P~wasV~~Dli- 86 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIFG----------KTQVGVGVQK--EGVFHTMWHVTRGAVL----THNGKRLE--PNWASVKKDLI- 86 (191)
T ss_dssp CCCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEEC--EEEEETTTTEE-
T ss_pred cCCCceEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEec--ceeecceecee-
Confidence 4467888987643221 1345677665 5889999999988652 12333332 22334455653
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCCCCCc---eeEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCC
Q 013804 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (436)
Q Consensus 204 Lkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 280 (436)
..-.+ + +|. . .=.-.+.|.++-++.+.... ...|+..-. . ...-.+.-...+|.||
T Consensus 87 -sYGG~---W---kL~-~-~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~--------~----g~iGaV~lD~p~GTSG 145 (191)
T 3u1j_B 87 -SYGGG---W---RLS-A-QWQKGEEVQVIAVEPGKNPKNFQTMPGTFQTT--------T----GEIGAIALDFKPGTSG 145 (191)
T ss_dssp -EESSS---C---CCC-C-CCCTTCCEEEEECCTTSCCEEEEECCEEEECS--------S----CEEEEECCCCCTTCTT
T ss_pred -ecCCc---c---cCC-c-ccCCCceEEEEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCC
Confidence 22221 1 221 1 11123556666666554432 223333210 1 1233344456689999
Q ss_pred CeEECCCCcEEEEEee
Q 013804 281 GPLLDSSGSLIGINTA 296 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (436)
+|++|.+|+|||+.--
T Consensus 146 SPIin~~G~VVGLYGN 161 (191)
T 3u1j_B 146 SPIINREGKVVGLYGN 161 (191)
T ss_dssp CEEECTTSCEEEECCB
T ss_pred CceecCCCcEEEEecC
Confidence 9999999999999543
No 343
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=88.51 E-value=0.67 Score=38.01 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=24.5
Q ss_pred EEccccCCCCCCCeEECCCCcEEEEEeeee
Q 013804 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (436)
Q Consensus 269 ~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (436)
.-...-.+|+||-|++|..|+||+|+-.+.
T Consensus 98 ip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa 127 (157)
T 1ep5_B 98 VPKGVGAKGDSGRPILDNQGRVVAIVLGGV 127 (157)
T ss_dssp EETTCCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred eccCCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 334455689999999999999999987654
No 344
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=88.31 E-value=0.4 Score=42.96 Aligned_cols=29 Identities=28% Similarity=0.563 Sum_probs=24.0
Q ss_pred ccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 271 DAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 271 ~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
...-.+|+||-|++|..|+||+|+-.+..
T Consensus 197 ~G~G~~GDSGRpI~DN~GrVVaIVLGGan 225 (253)
T 2yew_A 197 TGSGKPGDSGRPIFDNTGKVVAIVLGGAN 225 (253)
T ss_dssp TTSCCSSCTTCEEECSSCBEEEEEEEEEE
T ss_pred cCCCCCCCCCCccccCCCcEEEEEecCCC
Confidence 34456899999999999999999877643
No 345
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=88.29 E-value=0.78 Score=37.63 Aligned_cols=30 Identities=37% Similarity=0.585 Sum_probs=24.7
Q ss_pred EccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 270 TDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 270 ~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
-...-.+|+||-|++|..|+||+|+-.+..
T Consensus 100 p~g~g~~GdSGrPi~Dn~GrVVaIVlGG~n 129 (158)
T 4agk_A 100 PTGAGGPGDSGRPILDNSGKVVAIVLGGAN 129 (158)
T ss_dssp ETTSSCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred ecccCCCCCCCCccccCCCCEEEEEecCCC
Confidence 344567899999999999999999877643
No 346
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=88.22 E-value=0.47 Score=39.06 Aligned_cols=29 Identities=24% Similarity=0.442 Sum_probs=24.0
Q ss_pred ccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 271 DAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 271 ~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
...-.+|+||-|++|..|+||+|+-.+..
T Consensus 102 ~GvG~~GDSGRpI~DN~GrVVaivlgg~~ 130 (161)
T 1svp_A 102 RGVGGRGDAGRPIMDNSGRVVAIVLGGAD 130 (161)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 34456899999999999999999877643
No 347
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=88.21 E-value=2.8 Score=35.47 Aligned_cols=136 Identities=20% Similarity=0.279 Sum_probs=73.2
Q ss_pred CeEEEEEEEcCCCEEEecccccC-CCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCC-CCCcceecCCCCCCCCCC
Q 013804 151 QGSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQ 228 (436)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~~l~~~~~~~~G~ 228 (436)
-+.|-||-|++. ..+|+-||+. +.+++. | .+...+..+..-+++.+++..+. .++.-..|.. . ...|.
T Consensus 25 fgsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEe-g-~peGt 94 (194)
T 2fyq_A 25 FGSGWGFWVSPT-VFITTTHVVPTGVKEFF-----G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEE-G-CPEGT 94 (194)
T ss_dssp ETTEEEEESSSS-EEEEEGGGSCSSCSEET-----T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECS-S-CCTTC
T ss_pred ccCceeEEEccc-EEEEEeeecCCCChhhc-----C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEec-C-CCCCc
Confidence 467899999987 9999999995 444321 1 12223445556688888887643 3455555532 2 23476
Q ss_pred EEEE-EecCCCCC--CceeEeEEeeeeeeeccCCCCCCcccEEEE-------ccccCCCCCCCeEECCCC---cEEEEEe
Q 013804 229 KVYA-IGNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQT-------DAAINPGNSGGPLLDSSG---SLIGINT 295 (436)
Q Consensus 229 ~V~~-vG~p~g~~--~~~~~G~vs~~~~~~~~~~~~~~~~~~i~~-------~~~i~~G~SGGPlvd~~G---~VVGI~s 295 (436)
-+.+ +-.+.+.. ..+..|.+....-.-... ......+.+ |-...||+-|.|-+-..| -|+||+.
T Consensus 95 V~silikR~sgellPlaVRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~ 171 (194)
T 2fyq_A 95 VCSVLIKRDSGELLPLAVRMGAIASMRIQGRLV---HGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHA 171 (194)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCcceEEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEE
Confidence 6554 34444432 234444443222110000 000112222 334558999999985544 4999999
Q ss_pred eeec
Q 013804 296 AIYS 299 (436)
Q Consensus 296 ~~~~ 299 (436)
+...
T Consensus 172 Aatr 175 (194)
T 2fyq_A 172 AATK 175 (194)
T ss_dssp EECS
T ss_pred eecc
Confidence 8644
No 348
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=88.08 E-value=0.84 Score=36.97 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=24.5
Q ss_pred EccccCCCCCCCeEECCCCcEEEEEeeeec
Q 013804 270 TDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 270 ~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~ 299 (436)
-...-.+|+||-|++|..|+||+|+-.+..
T Consensus 92 p~G~g~~GdSGrpI~Dn~GrVVaIVlGG~~ 121 (149)
T 1vcp_A 92 PTGAGKPGDSGRPIFDNKGRVVAIVLGGAN 121 (149)
T ss_dssp ETTSCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cccCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 344556899999999999999999876643
No 349
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=87.01 E-value=0.48 Score=42.78 Aligned_cols=28 Identities=29% Similarity=0.465 Sum_probs=23.5
Q ss_pred ccccCCCCCCCeEECCCCcEEEEEeeee
Q 013804 271 DAAINPGNSGGPLLDSSGSLIGINTAIY 298 (436)
Q Consensus 271 ~~~i~~G~SGGPlvd~~G~VVGI~s~~~ 298 (436)
...-.+|+||-|++|..|+||+|+-.+.
T Consensus 207 ~G~G~~GDSGRpI~DN~GrVVaIVLGGa 234 (264)
T 1kxf_A 207 RGVGGRGDSGRPIMDNSGRVVAIVLGGA 234 (264)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred ccCCCCCCCCCccccCCCcEEEEEecCC
Confidence 3445689999999999999999987764
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=79.63 E-value=0.98 Score=39.26 Aligned_cols=132 Identities=22% Similarity=0.277 Sum_probs=64.8
Q ss_pred EEEEEEcCCCEEEecccccCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEE
Q 013804 154 GSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAI 233 (436)
Q Consensus 154 GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~v 233 (436)
--|+.|+ |-.-|.+|--....- .+..-+....+.+...|+..-....-...+.|-.-+. +.+|++
T Consensus 64 fmgT~vn--GVlwTvyHGag~rTl------AgpkGpv~qm~~s~~~Dlv~wP~P~Ga~sL~PCtCg~-------sdlylV 128 (203)
T 3su6_A 64 FLATSIN--GVLWTVYHGAGTRTI------ASPKGPVTQMYTNVDKDLVGWQAPQGSRSLTPCTCGS-------SDLYLV 128 (203)
T ss_dssp EEEEEET--TEEEEEHHHHTTCCB------CBTTSCBCCSEEETTTTEEEEECCTTBCCBCBCCSCC-------CEEEEE
T ss_pred eeheEEc--cEEEEEeecCCcccc------cCCCCccceeeeccccCeecccCCCCCcccCcccccC-------ccEEEE
Confidence 3466774 778888885433210 0111122233556677888877654333444433321 346666
Q ss_pred ecCCCCCCceeEeEEeeeeeeeccCCCCCCcccEE-EEccccCCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeee
Q 013804 234 GNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI-QTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIP 312 (436)
Q Consensus 234 G~p~g~~~~~~~G~vs~~~~~~~~~~~~~~~~~~i-~~~~~i~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP 312 (436)
-.-. .+..+ ++. ++....++ -.......|.||||++...|.+|||..+.....+....+ .+||
T Consensus 129 tr~a----dvip~-----rrr------gd~~~~LlsprpiS~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai-~fvP 192 (203)
T 3su6_A 129 TRHA----DVIPV-----RRR------GDSRGSLLSPRPISYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAV-DFIP 192 (203)
T ss_dssp CTTC----CEEEE-----EEC------SSSEEEEEEEEEGGGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEE-EEEE
T ss_pred eccC----cEeee-----eec------CCcceeeecCccceeccCCCCCceecCCCCEEEEEEEEEEcCceeeeE-EEEE
Confidence 3211 11111 110 11111111 112234579999999999999999976554432222222 3356
Q ss_pred eecc
Q 013804 313 VDTV 316 (436)
Q Consensus 313 ~~~i 316 (436)
++.+
T Consensus 193 ve~l 196 (203)
T 3su6_A 193 VESL 196 (203)
T ss_dssp HHHH
T ss_pred cccc
Confidence 5443
No 351
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=63.87 E-value=12 Score=38.74 Aligned_cols=48 Identities=19% Similarity=0.213 Sum_probs=31.8
Q ss_pred CcEEEEECCEEeCCHHHHH-------------HHHh---------cC-CCCCEEEEEEEE-CCEEEEEEEEe
Q 013804 382 GDIITSVNGKKVSNGSDLY-------------RILD---------QC-KVGDEVIVEVLR-GDQKEKIPVKL 429 (436)
Q Consensus 382 GDiIl~vnG~~V~s~~dl~-------------~~l~---------~~-~~g~~v~l~v~R-~g~~~~~~v~~ 429 (436)
||.|++|||+++..+-+-. .++. .. -+-+.++|++.| +|+..+++++-
T Consensus 113 GdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~pW 184 (583)
T 3dor_A 113 GDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKW 184 (583)
T ss_dssp TCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEeee
Confidence 9999999999987653321 1111 11 234588899866 57888877654
No 352
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=52.39 E-value=51 Score=22.97 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=33.5
Q ss_pred cCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCC
Q 013804 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (436)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (436)
+...+++-++..||+-|.++++.++...+-++++++..
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 44567888999999999999999999999999999864
No 353
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=44.81 E-value=12 Score=31.58 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=19.3
Q ss_pred CCCCCCeEECCCCcEEEEEeee
Q 013804 276 PGNSGGPLLDSSGSLIGINTAI 297 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~ 297 (436)
.+.++-|++|.+|+++||++..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 6788999999999999998753
No 354
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=43.67 E-value=72 Score=23.21 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=29.6
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+++.++|...++.+=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 468899999999999999999999999888754
No 355
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=43.57 E-value=39 Score=28.14 Aligned_cols=30 Identities=37% Similarity=0.620 Sum_probs=23.8
Q ss_pred EEEEccccCCCCCCCeEECCCCcEEEEEeee
Q 013804 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (436)
Q Consensus 267 ~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (436)
++.-..+..||+=||.|. ...-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~-C~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLL-CKHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEE-ETTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceee-eCCCceEEEecC
Confidence 444456778999999999 456699999986
No 356
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=43.36 E-value=14 Score=32.52 Aligned_cols=42 Identities=36% Similarity=0.689 Sum_probs=27.2
Q ss_pred CCCCCCCeEECCCCcEEEEEeeeecCCCCCCcceeeeeeeccc
Q 013804 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVN 317 (436)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~~~~~~~~~~~~~~aIP~~~i~ 317 (436)
..|.||+||+-+.|++|||.....-..+-...+-| +|.+.+.
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~ 187 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLE 187 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eeccccc
Confidence 57889999999999999987654332222223334 5655443
No 357
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=43.21 E-value=76 Score=22.78 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=32.7
Q ss_pred cCCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCC
Q 013804 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (436)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (436)
+.-.+.+..+..||.-|++++..++....-+++++...
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 44456788888999999999999999999999999763
No 358
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=40.18 E-value=57 Score=27.78 Aligned_cols=31 Identities=29% Similarity=0.457 Sum_probs=24.4
Q ss_pred cEEEEccccCCCCCCCeEECCCCcEEEEEeee
Q 013804 266 DVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (436)
Q Consensus 266 ~~i~~~~~i~~G~SGGPlvd~~G~VVGI~s~~ 297 (436)
.++.-..+..||+=||.|. ...-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~-C~HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILR-CEHGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEE-CSSSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceee-eCCCceEEEecC
Confidence 3444556778999999999 456699999986
No 359
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=39.00 E-value=53 Score=23.88 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.6
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+++.++|...++.+=....
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 578999999999999999999999998887754
No 360
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=38.53 E-value=51 Score=23.90 Aligned_cols=33 Identities=15% Similarity=0.412 Sum_probs=29.5
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 578999999999999999999999998887754
No 361
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=37.52 E-value=49 Score=25.02 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=29.3
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+.+.+.+.++|...++.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 468999999999999999999999998877653
No 362
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=37.09 E-value=54 Score=24.19 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=29.7
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+.+.+++.++|...++.|=....
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 478999999999999999999999999888764
No 363
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=35.89 E-value=46 Score=24.16 Aligned_cols=21 Identities=14% Similarity=0.422 Sum_probs=17.6
Q ss_pred CEEEEEEEECCEEEEEEEEee
Q 013804 410 DEVIVEVLRGDQKEKIPVKLE 430 (436)
Q Consensus 410 ~~v~l~v~R~g~~~~~~v~~~ 430 (436)
-.+++++.|||++.++.+.+.
T Consensus 6 vditikiqrdgqeieidirvs 26 (96)
T 2jvf_A 6 VDITIKIQRDGQEIEIDIRVS 26 (96)
T ss_dssp CEEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEEeeCCeEEEEEEEEc
Confidence 358899999999999888764
No 364
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=35.39 E-value=86 Score=23.74 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=27.9
Q ss_pred CeEEEEecCCcEEeeEEEEEcC-CCCeEEEEEc
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQ-DKDVAVLRID 207 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~-~~DlAlLkv~ 207 (436)
..+.|.+.||+.|.+.+..+|| ...+.|+...
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 4789999999999999999994 5699998873
No 365
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=35.39 E-value=20 Score=29.88 Aligned_cols=22 Identities=9% Similarity=0.154 Sum_probs=18.7
Q ss_pred CCCCCCCeEECCCCcEEEEEee
Q 013804 275 NPGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 275 ~~G~SGGPlvd~~G~VVGI~s~ 296 (436)
..|.|+-|++|.+|+++||++.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 4789999999999999999875
No 366
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=34.48 E-value=63 Score=24.00 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=29.5
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+.+.+++.++|...++.|=....
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 478999999999999999999999998887754
No 367
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=34.04 E-value=22 Score=29.66 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.4
Q ss_pred CeEECCCCcEEEEEee
Q 013804 281 GPLLDSSGSLIGINTA 296 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (436)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6899999999999875
No 368
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=33.20 E-value=23 Score=27.89 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=16.8
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+..--|++|.+|+++||++.
T Consensus 97 ~~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 97 QRYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TTCCEEEEECTTSCEEEEEEH
T ss_pred cCCeEEEEEeCCCCEEEEEEH
Confidence 344567899999999999875
No 369
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=33.10 E-value=73 Score=23.89 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=28.9
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEc
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (436)
..+.|.+.+|+.+.+++.++|...++.|=.+.
T Consensus 17 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 48 (86)
T 3s6n_F 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTE 48 (86)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEcCCeEEEEEEEEEcCceEEEEeeEE
Confidence 57899999999999999999999999887775
No 370
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=33.03 E-value=78 Score=23.02 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.5
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.|.+++..+|...++.+=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 468899999999999999999999999887754
No 371
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=32.30 E-value=58 Score=23.64 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=28.3
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEc
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (436)
..+.|.+.+|+.+.+++.++|...++.+=...
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEE
Confidence 57889999999999999999999988877664
No 372
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=31.90 E-value=25 Score=28.19 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=16.5
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44567899999999999875
No 373
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=31.69 E-value=85 Score=22.80 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.3
Q ss_pred CeEEEEecCC-cEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+| +.+.+++.++|...++.+=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 5688999999 99999999999999998887754
No 374
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=31.62 E-value=26 Score=27.58 Aligned_cols=20 Identities=30% Similarity=0.345 Sum_probs=16.0
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+...-|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 98 KCSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCCEEEEEEH
Confidence 34457899999999999875
No 375
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=31.40 E-value=73 Score=24.31 Aligned_cols=33 Identities=6% Similarity=0.232 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+++.++|...++.|=....
T Consensus 20 ~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 578999999999999999999999998877753
No 376
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=31.32 E-value=26 Score=27.87 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.3
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..-.|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 44567889999999999875
No 377
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=30.99 E-value=76 Score=25.24 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=29.5
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+.+.+.+.++|...+|.|=....
T Consensus 34 k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 578999999999999999999999999877754
No 378
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=30.93 E-value=26 Score=27.66 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=16.4
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 44567899999999999875
No 379
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=30.90 E-value=1.1e+02 Score=24.55 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=41.2
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEecCCC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g 238 (436)
..+.|.+.++..|.+++..+|...++.|=.+......-....++ .-+-.|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 47889999999999999999999999988775422111222332 11334667776665544
No 380
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=30.80 E-value=60 Score=23.96 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=29.4
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+++.++|...++.|=....
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 478999999999999999999999998877754
No 381
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=30.35 E-value=26 Score=27.68 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=15.4
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44567899989999999875
No 382
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=30.04 E-value=79 Score=24.27 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=29.0
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 478999999999999999999999998877653
No 383
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=30.02 E-value=66 Score=24.71 Aligned_cols=33 Identities=6% Similarity=0.166 Sum_probs=29.3
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.+|+.+.+.+.++|+..++.|=....
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 578999999999999999999999998877653
No 384
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=28.92 E-value=84 Score=25.10 Aligned_cols=34 Identities=6% Similarity=0.261 Sum_probs=30.4
Q ss_pred CCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 3679999999999999999999999999987764
No 385
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=27.97 E-value=33 Score=26.45 Aligned_cols=20 Identities=35% Similarity=0.556 Sum_probs=16.4
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+.+--|++|.+|+++|+++.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 45567899988999999875
No 386
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=27.62 E-value=32 Score=27.82 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=16.4
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44567999999999999875
No 387
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=27.54 E-value=38 Score=27.17 Aligned_cols=19 Identities=37% Similarity=0.768 Sum_probs=15.3
Q ss_pred CeEECCCCcEEEEEeeeec
Q 013804 281 GPLLDSSGSLIGINTAIYS 299 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~~~ 299 (436)
.|++|.+|++||+++.+..
T Consensus 106 ~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEECTTCCEEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEEE
Confidence 4888878999999887643
No 388
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=27.43 E-value=32 Score=28.29 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.2
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 44457899999999999875
No 389
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=27.35 E-value=30 Score=28.27 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=16.5
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 115 ~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 115 RVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TCSCEEEECTTSCEEEEECH
T ss_pred CCcEEEEEeCCCCEEEEeeH
Confidence 44567999999999999875
No 390
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=26.82 E-value=1e+02 Score=24.17 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=29.0
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEc
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (436)
..+.|.+.+|+.|.+++.++|...++.|=.+.
T Consensus 27 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~ 58 (105)
T 4emh_A 27 RPILVELKNGETFNGHLENCDNYMNLTLREVI 58 (105)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEcCCceEEEEEEE
Confidence 46889999999999999999999999888775
No 391
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=26.38 E-value=35 Score=27.51 Aligned_cols=16 Identities=25% Similarity=0.198 Sum_probs=14.2
Q ss_pred CeEECCCCcEEEEEee
Q 013804 281 GPLLDSSGSLIGINTA 296 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (436)
-|++|.+|+++||++.
T Consensus 119 l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTR 134 (150)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEECCCCcEEEEEEH
Confidence 7899989999999875
No 392
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=26.33 E-value=80 Score=23.31 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=29.8
Q ss_pred CCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCC
Q 013804 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (436)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (436)
.+++-++..||.-|.++++.++...+-+++++++.
T Consensus 30 GeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 30 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 45566677899999999999999999999999864
No 393
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=25.81 E-value=37 Score=26.92 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.2
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+...-|++|.+|+++||++.
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCCEEEEEEH
Confidence 44567899989999999875
No 394
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=25.70 E-value=35 Score=29.86 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=16.6
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--||+|.+|+++||++.
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEEcCCCeEEEEEEH
Confidence 44567999999999999875
No 395
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=25.66 E-value=1.1e+02 Score=23.92 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=29.4
Q ss_pred EeeEEEEEcCCCCeEEEEEcCCCCCCcceecCCCC-CCCCCCEEEE-Eec
Q 013804 188 YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSA-DLLVGQKVYA-IGN 235 (436)
Q Consensus 188 ~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~-~~~~G~~V~~-vG~ 235 (436)
++++++..+...++|++.+... ...+.+.--. ++.+|++|++ +||
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv---~reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGV---RRDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTE---EEEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCE---EEEEEEEeecCCCCCCCEEEEeech
Confidence 5788888875558999988642 2233332222 4778999987 564
No 396
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=25.35 E-value=75 Score=28.74 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=28.4
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
..+.|.+.||+++.+++..+|...+|.|=.+++
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 468899999999999999999999888766543
No 397
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=24.87 E-value=39 Score=27.01 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=16.9
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+--||+|.+|+++||++.
T Consensus 114 ~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 114 TKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp SSCCEEEEECTTSBEEEEEEH
T ss_pred CCCCEEEEECCCCcEEEEEEH
Confidence 345567899999999999875
No 398
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=24.81 E-value=39 Score=26.49 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=16.1
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+...-|++|.+|+++|+++.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 44456899989999999875
No 399
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=24.81 E-value=1.8e+02 Score=20.24 Aligned_cols=36 Identities=17% Similarity=0.362 Sum_probs=27.6
Q ss_pred CCCCeEEEEe-cCCcEEeeEEEEEcCCCCeEEEEEcC
Q 013804 173 RGASDIRVTF-ADQSAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 173 ~~~~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
.-.+.+...+ .||+.|+|++...+...+.+.+.+..
T Consensus 10 ~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 10 KVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp CTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 3345566777 58999999999999877777777764
No 400
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=24.69 E-value=40 Score=27.45 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.1
Q ss_pred CeEECCCCcEEEEEee
Q 013804 281 GPLLDSSGSLIGINTA 296 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (436)
-|++|.+|+++||++.
T Consensus 118 lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEET
T ss_pred EEEEcCCCeEEEEEEH
Confidence 7889989999999875
No 401
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=24.30 E-value=1e+02 Score=23.54 Aligned_cols=34 Identities=12% Similarity=0.206 Sum_probs=29.8
Q ss_pred CCeEEEEecCC-cEEeeEEEEEcCCCCeEEEEEcC
Q 013804 175 ASDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (436)
Q Consensus 175 ~~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (436)
...+.|.+.+| +.+.+++.++|...++.|=.+..
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 35789999999 99999999999999998877754
No 402
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=23.89 E-value=41 Score=26.77 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=16.2
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 100 ~~~~l~Vvd~~g~~~Giit~ 119 (141)
T 2rih_A 100 NIRHVVVVNKNGELVGVLSI 119 (141)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCcEEEEEEH
Confidence 44457899989999999875
No 403
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=23.88 E-value=39 Score=24.10 Aligned_cols=20 Identities=10% Similarity=0.348 Sum_probs=15.1
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.++-|++| +|+++||.+-
T Consensus 21 ~~i~~~~V~d-~~~lvGIvT~ 40 (70)
T 3ghd_A 21 NKAGSAVVME-GDEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEE-TTEEEEEEEH
T ss_pred cCCCEEEEEE-CCEEEEEEEH
Confidence 4556667775 7999999885
No 404
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=23.63 E-value=41 Score=28.16 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=16.6
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..--|++|.+|+++||++.
T Consensus 136 ~~~~~pVvd~~g~lvGiit~ 155 (172)
T 3lhh_A 136 GSQMVFVVDEYGDLKGLVTL 155 (172)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEeeH
Confidence 45567899999999999875
No 405
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=23.51 E-value=42 Score=27.87 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=17.3
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+..--||+|.+|+++||++.
T Consensus 127 ~~~~~lpVvd~~g~~vGiit~ 147 (180)
T 3sl7_A 127 TKFRRLPVVDADGKLIGILTR 147 (180)
T ss_dssp STTCEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEECCCCeEEEEEEH
Confidence 455667999999999999875
No 406
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=23.42 E-value=43 Score=27.15 Aligned_cols=20 Identities=15% Similarity=0.111 Sum_probs=16.0
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+...-|++|.+|+++||++.
T Consensus 123 ~~~~lpVvd~~g~~vGiit~ 142 (152)
T 2uv4_A 123 EVHRLVVVDENDVVKGIVSL 142 (152)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCeEEEEECCCCeEEEEEEH
Confidence 34457899989999999875
No 407
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=23.38 E-value=50 Score=26.91 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=13.9
Q ss_pred CeEECCCCcEEEEEeee
Q 013804 281 GPLLDSSGSLIGINTAI 297 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~~ 297 (436)
.|+.|.+|++||+++.+
T Consensus 111 ~PV~~~~g~viGvv~vg 127 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG 127 (142)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEe
Confidence 47887789999998765
No 408
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=22.45 E-value=47 Score=26.94 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=18.1
Q ss_pred CCCCCCeEECCCCcEEEEEeee
Q 013804 276 PGNSGGPLLDSSGSLIGINTAI 297 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~~ 297 (436)
.+.+.-|++|.+|+++|+++..
T Consensus 50 ~~~~~~pVvd~~~~~vGivt~~ 71 (152)
T 2uv4_A 50 HRVSALPVVDEKGRVVDIYSKF 71 (152)
T ss_dssp HCCSEEEEECTTSBEEEEEEHH
T ss_pred cCCceEeEECCCCcEEEEEeHH
Confidence 3567889999999999998753
No 409
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=22.31 E-value=41 Score=28.39 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=16.4
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+..-.||+|.+|+++||++.
T Consensus 129 ~~~~~~Vvde~g~lvGiIT~ 148 (173)
T 3ocm_A 129 RGQLVLVADEFGAIEGLVTP 148 (173)
T ss_dssp TTCCEEEECTTCCEEEEECH
T ss_pred CCeEEEEEeCCCCEEEEEeH
Confidence 44567899999999999875
No 410
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.22 E-value=2.2e+02 Score=20.37 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=32.0
Q ss_pred CCCCeEEEEecCCcEEeeEEEEEcCCCCeEEEEEcCC
Q 013804 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (436)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (436)
...+++-.+..||.-|.+++..++....-+++++++.
T Consensus 11 ~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 11 WEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp CTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccC
Confidence 3456777888999999999999999999999999864
No 411
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=22.12 E-value=47 Score=26.69 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=18.0
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+.-|++|.+|+++|+++.
T Consensus 46 ~~~~~~pVvd~~~~~~Givt~ 66 (150)
T 3lqn_A 46 SGYSAIPVLDPMYKLHGLIST 66 (150)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCcEEEEECCCCCEEEEEEH
Confidence 466788999999999999875
No 412
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=22.10 E-value=49 Score=26.06 Aligned_cols=14 Identities=36% Similarity=0.805 Sum_probs=0.0
Q ss_pred eEECCCCcEEEEEe
Q 013804 282 PLLDSSGSLIGINT 295 (436)
Q Consensus 282 Plvd~~G~VVGI~s 295 (436)
|++|.+|+++||++
T Consensus 113 ~Vvd~~g~~~Giit 126 (138)
T 2p9m_A 113 PVVDKNNKLVGIIS 126 (138)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEECCCCeEEEEEE
No 413
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=21.74 E-value=54 Score=25.12 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=17.8
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+.-|++|.+|+++|+++.
T Consensus 30 ~~~~~~~Vvd~~~~~~G~vt~ 50 (122)
T 3kpb_A 30 HNINHLPIVDEHGKLVGIITS 50 (122)
T ss_dssp HTCSCEEEECTTSBEEEEECH
T ss_pred cCCCeEEEECCCCCEEEEEEH
Confidence 356788999999999999874
No 414
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=21.44 E-value=49 Score=26.86 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=17.2
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+.-|++|.+|+++|+++.
T Consensus 46 ~~~~~~~Vvd~~~~~~Giit~ 66 (156)
T 3ctu_A 46 MTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp CSSSEEEEECC-CBEEEEEEH
T ss_pred CCCceEeEECCCCEEEEEEcH
Confidence 567889999999999999874
No 415
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=21.16 E-value=50 Score=26.93 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=16.1
Q ss_pred CCCCCeEECCCCcEEEEEee
Q 013804 277 GNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 277 G~SGGPlvd~~G~VVGI~s~ 296 (436)
+...-|++|.+|+++||++.
T Consensus 125 ~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 125 NIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCcEEEEEcCCCEEEEEEEH
Confidence 44557899989999999875
No 416
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=21.11 E-value=49 Score=26.79 Aligned_cols=14 Identities=29% Similarity=0.358 Sum_probs=0.0
Q ss_pred eEECCCCcEEEEEe
Q 013804 282 PLLDSSGSLIGINT 295 (436)
Q Consensus 282 Plvd~~G~VVGI~s 295 (436)
|++|.+|+++||++
T Consensus 116 ~Vvd~~g~~~Giit 129 (157)
T 2emq_A 116 CVENDDGYFAGIFT 129 (157)
T ss_dssp EEECSSSSEEEEEE
T ss_pred EEEcCCCeEEEEEE
No 417
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=21.04 E-value=48 Score=22.69 Aligned_cols=20 Identities=10% Similarity=0.348 Sum_probs=16.3
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+.-|++|. |+++||++.
T Consensus 21 ~~~~~~pV~d~-~~l~Givt~ 40 (70)
T 3fio_A 21 NKAGSAVVMEG-DEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEET-TEEEEEEEH
T ss_pred cCCCEEEEEEC-CEEEEEEEH
Confidence 45677889986 999999875
No 418
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=20.64 E-value=52 Score=26.99 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=17.8
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.++-|++|.+|+++|+++.
T Consensus 34 ~~~~~~pVvd~~~~lvGivt~ 54 (160)
T 2o16_A 34 LDIRHVPIVDANKKLLGIVSQ 54 (160)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEEcCCCcEEEEEeH
Confidence 356788999989999999875
No 419
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=20.63 E-value=53 Score=26.80 Aligned_cols=16 Identities=19% Similarity=0.048 Sum_probs=14.0
Q ss_pred CeEECCCCcEEEEEee
Q 013804 281 GPLLDSSGSLIGINTA 296 (436)
Q Consensus 281 GPlvd~~G~VVGI~s~ 296 (436)
-|++|.+|+++||++.
T Consensus 118 lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 118 VCVENDEQVFEGIFTR 133 (159)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEEeCCCeEEEEEEH
Confidence 7889989999999875
No 420
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=20.32 E-value=54 Score=26.72 Aligned_cols=21 Identities=33% Similarity=0.433 Sum_probs=18.0
Q ss_pred CCCCCCeEECCCCcEEEEEee
Q 013804 276 PGNSGGPLLDSSGSLIGINTA 296 (436)
Q Consensus 276 ~G~SGGPlvd~~G~VVGI~s~ 296 (436)
.+.+.-|++|.+|+++|+++.
T Consensus 45 ~~~~~~pVvd~~~~lvGivt~ 65 (159)
T 1yav_A 45 TGYTAIPVLDPSYRLHGLIGT 65 (159)
T ss_dssp HCCSEEEEECTTCBEEEEEEH
T ss_pred CCCcEEEEECCCCCEEEEeEH
Confidence 467789999999999999875
No 421
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=20.05 E-value=94 Score=24.93 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=27.9
Q ss_pred CeEEEEecCCcEEeeEEEEEcCCCCeEEEEEc
Q 013804 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (436)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (436)
..+.|.+.+|+.+.+++.++|...++.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 46899999999999999999999998876553
Done!