Query 013810
Match_columns 436
No_of_seqs 352 out of 2275
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 17:31:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013810.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013810hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 8.8E-51 3E-55 406.6 29.0 336 60-404 40-398 (502)
2 4eqs_A Coenzyme A disulfide re 100.0 3.4E-46 1.1E-50 368.3 26.5 324 63-426 1-341 (437)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 3.1E-43 1.1E-47 345.0 28.7 300 63-412 3-321 (410)
4 3klj_A NAD(FAD)-dependent dehy 100.0 1.2E-43 4E-48 344.1 23.8 298 61-422 8-319 (385)
5 3lxd_A FAD-dependent pyridine 100.0 1.2E-42 4.2E-47 341.6 30.4 303 61-412 8-333 (415)
6 3hyw_A Sulfide-quinone reducta 100.0 9.3E-43 3.2E-47 343.5 27.5 307 63-405 3-331 (430)
7 3fg2_P Putative rubredoxin red 100.0 2.5E-42 8.7E-47 338.0 29.8 301 63-412 2-322 (404)
8 1xhc_A NADH oxidase /nitrite r 100.0 1.5E-42 5E-47 334.8 27.7 284 63-405 9-297 (367)
9 3iwa_A FAD-dependent pyridine 100.0 4.7E-42 1.6E-46 342.9 27.3 327 62-424 3-356 (472)
10 2gqw_A Ferredoxin reductase; f 100.0 8E-42 2.8E-46 334.6 27.4 293 61-406 6-309 (408)
11 3ics_A Coenzyme A-disulfide re 100.0 1.6E-41 5.4E-46 348.1 30.8 327 60-424 34-381 (588)
12 3ntd_A FAD-dependent pyridine 100.0 1.8E-41 6.3E-46 346.4 29.6 324 63-424 2-365 (565)
13 3kd9_A Coenzyme A disulfide re 100.0 2.4E-41 8.4E-46 335.6 26.1 319 62-424 3-342 (449)
14 2bc0_A NADH oxidase; flavoprot 100.0 1E-40 3.5E-45 334.4 29.6 301 61-405 34-361 (490)
15 3oc4_A Oxidoreductase, pyridin 100.0 5.9E-41 2E-45 333.1 25.3 316 63-424 3-341 (452)
16 2cdu_A NADPH oxidase; flavoenz 100.0 2.1E-40 7.2E-45 329.2 29.2 317 63-422 1-342 (452)
17 3h8l_A NADH oxidase; membrane 100.0 2.3E-40 7.9E-45 324.9 28.8 304 63-406 2-335 (409)
18 1q1r_A Putidaredoxin reductase 100.0 1.2E-40 4E-45 328.5 26.1 295 62-405 4-319 (431)
19 3cgb_A Pyridine nucleotide-dis 100.0 4.5E-40 1.5E-44 328.9 30.2 322 62-422 36-378 (480)
20 3sx6_A Sulfide-quinone reducta 100.0 3E-40 1E-44 326.6 27.4 308 62-406 4-343 (437)
21 1nhp_A NADH peroxidase; oxidor 100.0 1E-39 3.5E-44 323.8 29.2 317 63-421 1-340 (447)
22 2v3a_A Rubredoxin reductase; a 100.0 5.1E-39 1.7E-43 312.6 28.6 290 62-405 4-306 (384)
23 1m6i_A Programmed cell death p 100.0 1.9E-39 6.5E-44 325.0 23.4 314 61-415 10-367 (493)
24 3vrd_B FCCB subunit, flavocyto 100.0 3E-39 1E-43 316.3 22.0 298 62-405 2-322 (401)
25 3h28_A Sulfide-quinone reducta 100.0 1.5E-38 5E-43 313.9 26.7 306 63-406 3-332 (430)
26 2wpf_A Trypanothione reductase 100.0 7E-39 2.4E-43 321.0 23.9 285 62-404 7-354 (495)
27 1mo9_A ORF3; nucleotide bindin 100.0 1.5E-39 5.2E-44 328.2 18.7 304 61-423 42-403 (523)
28 3fbs_A Oxidoreductase; structu 100.0 3.1E-39 1.1E-43 302.9 18.2 282 62-406 2-291 (297)
29 4fk1_A Putative thioredoxin re 100.0 5E-39 1.7E-43 302.8 19.0 287 60-406 4-299 (304)
30 1zmd_A Dihydrolipoyl dehydroge 100.0 3.9E-39 1.3E-43 321.9 19.3 303 62-421 6-368 (474)
31 3f8d_A Thioredoxin reductase ( 100.0 1.4E-38 4.8E-43 301.9 21.7 287 62-406 15-316 (323)
32 3qfa_A Thioredoxin reductase 1 100.0 7E-39 2.4E-43 322.8 19.6 309 60-423 30-406 (519)
33 2hqm_A GR, grase, glutathione 100.0 3.7E-38 1.3E-42 314.9 24.7 286 61-404 10-346 (479)
34 1fec_A Trypanothione reductase 100.0 3.7E-38 1.3E-42 315.5 24.7 308 62-421 3-375 (490)
35 1xdi_A RV3303C-LPDA; reductase 100.0 7.1E-39 2.4E-43 321.9 19.5 306 62-422 2-367 (499)
36 1ges_A Glutathione reductase; 100.0 2.5E-38 8.5E-43 313.7 22.1 280 62-404 4-327 (450)
37 3dk9_A Grase, GR, glutathione 100.0 1.4E-38 4.6E-43 318.4 19.0 303 60-423 18-383 (478)
38 2qae_A Lipoamide, dihydrolipoy 100.0 3.1E-38 1.1E-42 315.0 21.3 304 62-421 2-363 (468)
39 3l8k_A Dihydrolipoyl dehydroge 100.0 2.2E-38 7.4E-43 315.7 19.5 285 62-405 4-333 (466)
40 2r9z_A Glutathione amide reduc 100.0 6.7E-38 2.3E-42 311.6 22.5 281 61-404 3-326 (463)
41 3cty_A Thioredoxin reductase; 100.0 9.7E-38 3.3E-42 296.0 22.5 286 61-407 15-316 (319)
42 3dgh_A TRXR-1, thioredoxin red 100.0 2.8E-38 9.7E-43 316.4 19.6 307 60-423 7-378 (483)
43 1ojt_A Surface protein; redox- 100.0 1E-37 3.5E-42 312.1 23.1 292 62-404 6-348 (482)
44 4a5l_A Thioredoxin reductase; 100.0 2.1E-38 7.3E-43 299.8 16.9 287 61-406 3-311 (314)
45 1ebd_A E3BD, dihydrolipoamide 100.0 8.3E-38 2.8E-42 310.8 21.7 285 62-405 3-333 (455)
46 4b1b_A TRXR, thioredoxin reduc 100.0 3.2E-38 1.1E-42 316.6 18.7 309 62-424 42-411 (542)
47 1onf_A GR, grase, glutathione 100.0 4.5E-38 1.6E-42 315.8 19.7 291 62-404 2-370 (500)
48 2q7v_A Thioredoxin reductase; 100.0 2.2E-37 7.5E-42 294.4 22.9 284 62-406 8-311 (325)
49 1zk7_A HGII, reductase, mercur 100.0 7.4E-37 2.5E-41 304.9 27.5 303 61-421 3-357 (467)
50 3itj_A Thioredoxin reductase 1 100.0 6.1E-38 2.1E-42 299.6 18.8 293 60-407 20-335 (338)
51 4gcm_A TRXR, thioredoxin reduc 100.0 4.6E-38 1.6E-42 297.3 17.7 283 61-406 5-305 (312)
52 2a8x_A Dihydrolipoyl dehydroge 100.0 6.5E-38 2.2E-42 312.3 19.5 286 62-404 3-333 (464)
53 2eq6_A Pyruvate dehydrogenase 100.0 3.7E-38 1.3E-42 313.7 17.7 282 62-405 6-334 (464)
54 3dgz_A Thioredoxin reductase 2 100.0 1.5E-38 5.1E-43 318.7 14.9 308 61-423 5-378 (488)
55 3urh_A Dihydrolipoyl dehydroge 100.0 4.8E-38 1.6E-42 315.4 18.5 308 61-423 24-388 (491)
56 1dxl_A Dihydrolipoamide dehydr 100.0 6.1E-38 2.1E-42 313.2 19.2 288 61-404 5-341 (470)
57 1v59_A Dihydrolipoamide dehydr 100.0 4.7E-38 1.6E-42 314.6 18.2 305 62-421 5-373 (478)
58 3lad_A Dihydrolipoamide dehydr 100.0 4.9E-38 1.7E-42 314.3 17.6 306 61-422 2-367 (476)
59 2q0l_A TRXR, thioredoxin reduc 100.0 3.8E-37 1.3E-41 290.8 21.6 283 63-406 2-308 (311)
60 1trb_A Thioredoxin reductase; 100.0 1.9E-37 6.4E-42 294.1 19.1 289 62-408 5-315 (320)
61 4dna_A Probable glutathione re 100.0 2.2E-37 7.6E-42 308.2 20.4 282 62-405 5-331 (463)
62 3r9u_A Thioredoxin reductase; 100.0 2.1E-37 7E-42 292.9 19.1 285 61-406 3-311 (315)
63 2zbw_A Thioredoxin reductase; 100.0 4.2E-37 1.4E-41 293.6 21.3 291 61-408 4-318 (335)
64 3o0h_A Glutathione reductase; 100.0 6E-37 2E-41 306.7 22.5 300 61-421 25-375 (484)
65 2yqu_A 2-oxoglutarate dehydrog 100.0 8.9E-37 3E-41 303.3 21.4 283 63-404 2-326 (455)
66 3lzw_A Ferredoxin--NADP reduct 100.0 7.6E-37 2.6E-41 291.2 19.9 287 62-408 7-316 (332)
67 1fl2_A Alkyl hydroperoxide red 100.0 4E-36 1.4E-40 283.7 23.0 284 63-406 2-304 (310)
68 1lvl_A Dihydrolipoamide dehydr 100.0 5E-36 1.7E-40 297.8 23.4 278 62-404 5-329 (458)
69 3ab1_A Ferredoxin--NADP reduct 100.0 3.2E-36 1.1E-40 290.5 20.5 291 61-408 13-329 (360)
70 2x8g_A Thioredoxin glutathione 100.0 1.2E-36 4E-41 312.4 18.2 306 61-421 106-483 (598)
71 3ic9_A Dihydrolipoamide dehydr 100.0 2.2E-36 7.4E-41 302.9 19.2 301 62-424 8-366 (492)
72 2vdc_G Glutamate synthase [NAD 100.0 6.7E-37 2.3E-41 302.3 14.8 345 1-407 63-444 (456)
73 2a87_A TRXR, TR, thioredoxin r 100.0 2.4E-36 8.1E-41 288.5 18.1 287 61-406 13-315 (335)
74 1vdc_A NTR, NADPH dependent th 100.0 2E-36 6.9E-41 288.7 16.3 294 62-407 8-323 (333)
75 4a9w_A Monooxygenase; baeyer-v 100.0 1.1E-35 3.6E-40 286.0 16.6 289 62-408 3-353 (357)
76 1hyu_A AHPF, alkyl hydroperoxi 100.0 8.8E-34 3E-38 285.6 24.0 283 61-406 211-515 (521)
77 3d1c_A Flavin-containing putat 100.0 5.9E-34 2E-38 275.4 19.6 289 62-406 4-338 (369)
78 2xve_A Flavin-containing monoo 100.0 8.2E-33 2.8E-37 274.8 20.1 276 63-405 3-339 (464)
79 1gte_A Dihydropyrimidine dehyd 100.0 1.6E-33 5.5E-38 303.7 15.6 345 1-404 120-505 (1025)
80 1lqt_A FPRA; NADP+ derivative, 100.0 5.1E-33 1.7E-37 275.0 14.7 299 62-406 3-386 (456)
81 1cjc_A Protein (adrenodoxin re 100.0 1.1E-32 3.9E-37 272.8 12.0 298 62-406 6-394 (460)
82 2gv8_A Monooxygenase; FMO, FAD 100.0 2.7E-31 9.1E-36 263.3 17.1 279 61-405 5-360 (447)
83 2gag_A Heterotetrameric sarcos 100.0 3E-31 1E-35 284.2 17.6 284 62-405 128-442 (965)
84 3k30_A Histamine dehydrogenase 100.0 1.5E-31 5.3E-36 278.1 13.8 266 60-406 389-674 (690)
85 1o94_A Tmadh, trimethylamine d 100.0 2.4E-31 8.2E-36 277.7 15.1 271 60-406 387-699 (729)
86 1y56_A Hypothetical protein PH 100.0 5.9E-31 2E-35 263.4 15.0 256 62-405 108-375 (493)
87 3s5w_A L-ornithine 5-monooxyge 100.0 1.5E-30 5.2E-35 259.3 17.5 305 61-406 29-448 (463)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 3.6E-30 1.2E-34 267.2 14.4 269 60-402 371-671 (671)
89 3gwf_A Cyclohexanone monooxyge 100.0 3.8E-29 1.3E-33 252.0 13.6 287 62-403 8-453 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 1.6E-27 5.5E-32 240.5 12.9 296 61-403 8-462 (545)
91 4ap3_A Steroid monooxygenase; 99.9 4.9E-27 1.7E-31 237.1 11.9 290 61-404 20-468 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.4E-25 4.8E-30 227.1 16.9 291 62-405 16-464 (542)
93 4b63_A L-ornithine N5 monooxyg 99.9 1.8E-21 6.2E-26 194.8 24.0 301 60-398 37-479 (501)
94 2ywl_A Thioredoxin reductase r 99.9 2.1E-22 7.3E-27 174.0 14.5 150 232-407 3-171 (180)
95 2e5v_A L-aspartate oxidase; ar 99.7 8E-19 2.7E-23 174.3 0.6 229 129-405 130-371 (472)
96 3fpz_A Thiazole biosynthetic e 99.6 2.9E-19 9.9E-24 169.3 -13.1 255 61-406 64-324 (326)
97 2gqf_A Hypothetical protein HI 99.6 3.8E-16 1.3E-20 151.7 5.8 36 62-97 4-39 (401)
98 2cul_A Glucose-inhibited divis 99.6 4.8E-15 1.6E-19 133.1 11.5 150 232-405 5-230 (232)
99 2zxi_A TRNA uridine 5-carboxym 99.3 7.4E-12 2.5E-16 125.9 11.7 121 62-190 27-188 (637)
100 2cul_A Glucose-inhibited divis 99.2 3.2E-11 1.1E-15 108.0 8.5 119 62-190 3-133 (232)
101 3ces_A MNMG, tRNA uridine 5-ca 99.2 4E-11 1.4E-15 121.1 8.9 121 62-190 28-189 (651)
102 2ywl_A Thioredoxin reductase r 99.1 7.9E-11 2.7E-15 101.0 7.3 111 63-184 2-112 (180)
103 1rp0_A ARA6, thiazole biosynth 99.0 3.4E-10 1.2E-14 104.5 8.6 158 232-406 41-274 (284)
104 3v76_A Flavoprotein; structura 99.0 4.5E-10 1.5E-14 109.3 7.9 38 60-97 25-62 (417)
105 3k7m_X 6-hydroxy-L-nicotine ox 99.0 6.1E-10 2.1E-14 109.2 6.8 87 285-374 205-307 (431)
106 1rp0_A ARA6, thiazole biosynth 99.0 1.7E-09 6E-14 99.7 9.4 121 61-184 38-193 (284)
107 2bry_A NEDD9 interacting prote 98.9 1.3E-09 4.3E-14 108.8 7.1 124 60-189 90-237 (497)
108 3nlc_A Uncharacterized protein 98.9 2.2E-09 7.4E-14 107.5 8.3 46 352-406 497-542 (549)
109 2i0z_A NAD(FAD)-utilizing dehy 98.9 3.1E-09 1.1E-13 104.7 8.8 38 60-97 24-61 (447)
110 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.6E-09 8.8E-14 102.9 7.4 36 62-97 11-46 (379)
111 3oz2_A Digeranylgeranylglycero 98.8 1.4E-09 4.9E-14 104.9 4.5 37 61-97 3-39 (397)
112 3i3l_A Alkylhalidase CMLS; fla 98.8 3.3E-09 1.1E-13 107.6 6.6 37 60-96 21-57 (591)
113 3cp8_A TRNA uridine 5-carboxym 98.8 5.5E-09 1.9E-13 105.5 6.8 120 61-189 20-181 (641)
114 2x3n_A Probable FAD-dependent 98.8 9.4E-09 3.2E-13 99.6 8.2 36 62-97 6-41 (399)
115 2xdo_A TETX2 protein; tetracyc 98.7 2.8E-08 9.7E-13 96.2 9.6 37 60-96 24-60 (398)
116 2bry_A NEDD9 interacting prote 98.7 6.2E-09 2.1E-13 103.8 4.8 146 170-336 37-231 (497)
117 3nix_A Flavoprotein/dehydrogen 98.7 9.4E-09 3.2E-13 100.3 5.6 34 62-95 5-38 (421)
118 3rp8_A Flavoprotein monooxygen 98.7 3.5E-08 1.2E-12 95.9 9.5 38 60-97 21-58 (407)
119 1yvv_A Amine oxidase, flavin-c 98.7 2.5E-08 8.5E-13 94.1 8.2 35 62-96 2-36 (336)
120 2vou_A 2,6-dihydroxypyridine h 98.7 2.9E-08 9.9E-13 96.1 8.8 36 61-96 4-39 (397)
121 3pl8_A Pyranose 2-oxidase; sub 98.7 1.5E-09 5.1E-14 110.9 -0.5 38 61-98 45-82 (623)
122 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 2.5E-08 8.4E-13 94.6 7.0 35 63-97 2-39 (342)
123 3dme_A Conserved exported prot 98.7 5.8E-08 2E-12 92.6 9.5 62 283-344 149-219 (369)
124 3atr_A Conserved archaeal prot 98.7 1.7E-08 5.8E-13 99.6 5.8 35 62-96 6-40 (453)
125 3ihg_A RDME; flavoenzyme, anth 98.6 4.7E-08 1.6E-12 98.5 8.5 36 61-96 4-39 (535)
126 3fmw_A Oxygenase; mithramycin, 98.6 3.2E-08 1.1E-12 100.2 7.1 37 61-97 48-84 (570)
127 3cgv_A Geranylgeranyl reductas 98.6 2.4E-08 8.2E-13 96.5 5.8 36 62-97 4-39 (397)
128 4hb9_A Similarities with proba 98.6 5.4E-08 1.9E-12 94.3 8.3 35 63-97 2-36 (412)
129 3kkj_A Amine oxidase, flavin-c 98.6 1.9E-08 6.5E-13 91.6 4.4 37 62-98 2-38 (336)
130 1k0i_A P-hydroxybenzoate hydro 98.6 9.2E-08 3.1E-12 92.4 8.5 35 62-96 2-36 (394)
131 3e1t_A Halogenase; flavoprotei 98.6 5.5E-08 1.9E-12 97.4 6.4 34 62-95 7-40 (512)
132 1y0p_A Fumarate reductase flav 98.6 9.4E-08 3.2E-12 97.1 8.1 36 62-97 126-161 (571)
133 3jsk_A Cypbp37 protein; octame 98.6 2E-07 6.7E-12 87.2 9.3 36 62-97 79-116 (344)
134 1d4d_A Flavocytochrome C fumar 98.5 6.1E-07 2.1E-11 91.0 13.6 36 62-97 126-161 (572)
135 1ryi_A Glycine oxidase; flavop 98.5 6.1E-08 2.1E-12 93.2 5.5 35 61-95 16-50 (382)
136 1y56_B Sarcosine oxidase; dehy 98.5 1.1E-07 3.7E-12 91.5 7.2 35 61-95 4-38 (382)
137 3dje_A Fructosyl amine: oxygen 98.5 1.7E-07 5.9E-12 91.9 8.6 36 61-96 5-41 (438)
138 2qa1_A PGAE, polyketide oxygen 98.5 1.2E-07 4.2E-12 94.5 7.4 37 61-97 10-46 (500)
139 3hyw_A Sulfide-quinone reducta 98.5 7.3E-08 2.5E-12 94.3 5.7 94 231-336 3-110 (430)
140 2qa2_A CABE, polyketide oxygen 98.5 1.3E-07 4.6E-12 94.2 7.6 37 61-97 11-47 (499)
141 2gmh_A Electron transfer flavo 98.5 2.2E-07 7.7E-12 94.3 9.2 37 61-97 34-76 (584)
142 3ps9_A TRNA 5-methylaminomethy 98.5 2.8E-07 9.6E-12 95.5 10.0 35 61-95 271-305 (676)
143 3nyc_A D-arginine dehydrogenas 98.5 5.6E-08 1.9E-12 93.3 4.3 36 61-97 8-43 (381)
144 3c96_A Flavin-containing monoo 98.5 1.6E-07 5.4E-12 91.4 7.5 37 61-97 3-40 (410)
145 1qo8_A Flavocytochrome C3 fuma 98.5 1.4E-07 4.7E-12 95.7 7.3 37 61-97 120-156 (566)
146 3vrd_B FCCB subunit, flavocyto 98.5 1.8E-07 6.2E-12 90.6 7.4 95 230-336 2-109 (401)
147 2uzz_A N-methyl-L-tryptophan o 98.5 1.6E-07 5.6E-12 89.8 6.7 35 62-96 2-36 (372)
148 3klj_A NAD(FAD)-dependent dehy 98.5 5.5E-07 1.9E-11 86.6 10.3 91 232-336 11-117 (385)
149 2gag_B Heterotetrameric sarcos 98.5 2.9E-07 1E-11 89.1 8.5 35 61-95 20-56 (405)
150 2aqj_A Tryptophan halogenase, 98.5 3.1E-07 1E-11 92.6 8.9 34 62-95 5-41 (538)
151 2yqu_A 2-oxoglutarate dehydrog 98.5 1.8E-07 6.3E-12 92.2 7.0 101 62-186 167-268 (455)
152 1nhp_A NADH peroxidase; oxidor 98.4 3.7E-07 1.3E-11 89.8 8.8 100 62-185 149-249 (447)
153 3fbs_A Oxidoreductase; structu 98.4 6.2E-07 2.1E-11 82.7 9.8 91 232-336 4-113 (297)
154 2r0c_A REBC; flavin adenine di 98.4 2.9E-07 1E-11 92.9 7.7 36 62-97 26-61 (549)
155 2eq6_A Pyruvate dehydrogenase 98.4 3.9E-07 1.3E-11 90.0 8.5 104 62-186 169-275 (464)
156 3sx6_A Sulfide-quinone reducta 98.4 3.4E-07 1.2E-11 89.7 7.5 94 232-336 6-113 (437)
157 3lxd_A FAD-dependent pyridine 98.4 6.8E-07 2.3E-11 87.0 9.4 101 62-184 152-253 (415)
158 1lvl_A Dihydrolipoamide dehydr 98.4 2.2E-07 7.6E-12 91.6 5.9 101 62-186 171-272 (458)
159 3pvc_A TRNA 5-methylaminomethy 98.4 7.8E-07 2.7E-11 92.3 10.0 35 61-95 263-297 (689)
160 2v3a_A Rubredoxin reductase; a 98.4 8.8E-07 3E-11 85.2 9.0 100 62-184 145-245 (384)
161 3c4n_A Uncharacterized protein 98.4 2.7E-07 9.2E-12 89.5 5.2 34 62-95 36-71 (405)
162 3fg2_P Putative rubredoxin red 98.4 7E-07 2.4E-11 86.6 8.1 101 62-184 142-243 (404)
163 3f8d_A Thioredoxin reductase ( 98.3 1.7E-06 5.9E-11 80.7 10.1 91 232-336 17-126 (323)
164 2q7v_A Thioredoxin reductase; 98.3 1.9E-06 6.6E-11 80.7 10.5 91 232-336 10-124 (325)
165 1ebd_A E3BD, dihydrolipoamide 98.3 7.2E-07 2.5E-11 87.9 7.8 103 62-185 170-273 (455)
166 2gjc_A Thiazole biosynthetic e 98.3 1.1E-06 3.7E-11 81.7 8.4 36 62-97 65-102 (326)
167 1v59_A Dihydrolipoamide dehydr 98.3 8.2E-07 2.8E-11 88.1 7.9 103 62-185 183-290 (478)
168 2gqw_A Ferredoxin reductase; f 98.3 8.4E-07 2.9E-11 86.1 7.8 96 62-184 145-241 (408)
169 3h8l_A NADH oxidase; membrane 98.3 6.3E-07 2.2E-11 87.0 6.5 94 232-336 3-114 (409)
170 1ges_A Glutathione reductase; 98.3 7.5E-07 2.5E-11 87.6 7.0 100 62-185 167-268 (450)
171 2dkh_A 3-hydroxybenzoate hydro 98.3 1.2E-06 4E-11 90.1 8.4 35 62-96 32-67 (639)
172 4a9w_A Monooxygenase; baeyer-v 98.3 3.5E-06 1.2E-10 79.7 11.2 89 232-335 5-132 (357)
173 2bc0_A NADH oxidase; flavoprot 98.3 1.6E-06 5.3E-11 86.3 8.9 100 62-185 194-294 (490)
174 1zmd_A Dihydrolipoyl dehydroge 98.3 1.2E-06 4.1E-11 86.8 8.0 102 62-185 178-285 (474)
175 3itj_A Thioredoxin reductase 1 98.3 1.9E-06 6.4E-11 81.0 8.8 92 231-336 23-143 (338)
176 2q0l_A TRXR, thioredoxin reduc 98.3 2.9E-06 1E-10 78.8 10.0 91 232-336 3-115 (311)
177 2a8x_A Dihydrolipoyl dehydroge 98.3 1.2E-06 4.1E-11 86.5 7.6 103 62-185 171-274 (464)
178 1q1r_A Putidaredoxin reductase 98.3 1.2E-06 4.3E-11 85.5 7.6 101 62-184 149-252 (431)
179 2cdu_A NADPH oxidase; flavoenz 98.3 1.6E-06 5.5E-11 85.3 8.3 101 62-185 149-250 (452)
180 3oc4_A Oxidoreductase, pyridin 98.3 3.3E-06 1.1E-10 83.0 10.5 101 62-186 147-248 (452)
181 1onf_A GR, grase, glutathione 98.3 2E-06 6.7E-11 85.8 8.9 100 62-185 176-278 (500)
182 3r9u_A Thioredoxin reductase; 98.3 3.3E-06 1.1E-10 78.5 9.8 91 232-336 6-119 (315)
183 3alj_A 2-methyl-3-hydroxypyrid 98.2 9.4E-06 3.2E-10 77.8 13.2 91 232-336 13-161 (379)
184 4dgk_A Phytoene dehydrogenase; 98.2 4.5E-07 1.5E-11 90.5 3.9 51 284-334 221-277 (501)
185 3ic9_A Dihydrolipoamide dehydr 98.2 2.4E-06 8.1E-11 85.0 8.8 103 62-186 174-278 (492)
186 2r9z_A Glutathione amide reduc 98.2 1.6E-06 5.6E-11 85.5 7.5 101 62-185 166-267 (463)
187 3ef6_A Toluene 1,2-dioxygenase 98.2 4.6E-06 1.6E-10 80.9 10.5 93 232-336 4-112 (410)
188 3h28_A Sulfide-quinone reducta 98.2 7.3E-07 2.5E-11 87.2 4.6 93 232-336 4-110 (430)
189 1ojt_A Surface protein; redox- 98.2 1.5E-06 5E-11 86.4 6.8 99 62-184 185-288 (482)
190 4b1b_A TRXR, thioredoxin reduc 98.2 1.7E-06 6E-11 86.6 7.3 99 62-185 223-322 (542)
191 2wpf_A Trypanothione reductase 98.2 1.8E-06 6.1E-11 86.0 7.4 100 62-185 191-295 (495)
192 3cgb_A Pyridine nucleotide-dis 98.2 1.8E-06 6.3E-11 85.6 7.4 100 61-185 185-285 (480)
193 3lzw_A Ferredoxin--NADP reduct 98.2 3.3E-06 1.1E-10 79.1 8.7 91 231-336 8-127 (332)
194 3nlc_A Uncharacterized protein 98.2 2.8E-06 9.4E-11 85.1 8.4 103 231-347 108-292 (549)
195 2hqm_A GR, grase, glutathione 98.2 1.6E-06 5.5E-11 86.0 6.5 99 62-184 185-287 (479)
196 1fec_A Trypanothione reductase 98.2 2E-06 6.9E-11 85.5 7.2 100 62-185 187-291 (490)
197 1fl2_A Alkyl hydroperoxide red 98.2 5.3E-06 1.8E-10 77.0 9.6 91 232-336 3-116 (310)
198 2qae_A Lipoamide, dihydrolipoy 98.2 2.7E-06 9.2E-11 84.1 7.9 103 62-185 174-279 (468)
199 1dxl_A Dihydrolipoamide dehydr 98.2 1.5E-06 5.2E-11 85.9 6.0 103 62-185 177-282 (470)
200 3urh_A Dihydrolipoyl dehydroge 98.2 3.1E-06 1.1E-10 84.2 8.2 104 62-186 198-304 (491)
201 2zbw_A Thioredoxin reductase; 98.2 6.3E-06 2.1E-10 77.4 9.6 90 232-335 7-121 (335)
202 4gde_A UDP-galactopyranose mut 98.1 6.6E-07 2.3E-11 89.5 2.8 49 285-333 223-274 (513)
203 4eqs_A Coenzyme A disulfide re 98.1 3.2E-06 1.1E-10 82.7 7.6 96 62-185 147-243 (437)
204 3ntd_A FAD-dependent pyridine 98.1 4.1E-06 1.4E-10 84.9 8.7 99 62-184 151-269 (565)
205 3ab1_A Ferredoxin--NADP reduct 98.1 1.4E-05 4.8E-10 75.9 11.9 90 232-335 16-131 (360)
206 1xdi_A RV3303C-LPDA; reductase 98.1 2.6E-06 8.8E-11 85.0 6.9 100 62-185 182-282 (499)
207 3ics_A Coenzyme A-disulfide re 98.1 2.6E-06 8.9E-11 86.7 7.0 97 62-184 187-284 (588)
208 1zk7_A HGII, reductase, mercur 98.1 2.7E-06 9.1E-11 84.1 6.9 98 62-185 176-274 (467)
209 1xhc_A NADH oxidase /nitrite r 98.1 1.9E-06 6.6E-11 82.3 5.6 92 63-184 144-236 (367)
210 3iwa_A FAD-dependent pyridine 98.1 3.7E-06 1.3E-10 83.2 7.7 100 62-184 159-260 (472)
211 1pj5_A N,N-dimethylglycine oxi 98.1 2.8E-06 9.6E-11 90.1 7.2 35 62-96 4-39 (830)
212 3lad_A Dihydrolipoamide dehydr 98.1 6E-06 2E-10 81.8 9.0 103 62-185 180-283 (476)
213 1kf6_A Fumarate reductase flav 98.1 6.8E-06 2.3E-10 83.6 9.5 35 62-96 5-41 (602)
214 1vdc_A NTR, NADPH dependent th 98.1 6.7E-06 2.3E-10 77.2 8.8 90 232-336 10-125 (333)
215 1trb_A Thioredoxin reductase; 98.1 9.3E-06 3.2E-10 75.7 9.5 101 62-185 145-250 (320)
216 3d1c_A Flavin-containing putat 98.1 1.6E-05 5.3E-10 75.8 11.1 90 232-336 6-144 (369)
217 2gv8_A Monooxygenase; FMO, FAD 98.1 1.1E-05 3.9E-10 79.1 10.3 84 62-186 212-296 (447)
218 3kd9_A Coenzyme A disulfide re 98.1 7.2E-06 2.5E-10 80.5 8.9 98 62-184 148-246 (449)
219 2a87_A TRXR, TR, thioredoxin r 98.1 9.9E-06 3.4E-10 76.2 9.4 92 231-336 15-127 (335)
220 3dk9_A Grase, GR, glutathione 98.1 5.6E-06 1.9E-10 82.1 7.7 105 62-185 187-296 (478)
221 3v76_A Flavoprotein; structura 98.1 1.3E-05 4.4E-10 77.8 10.1 89 232-335 29-187 (417)
222 2b9w_A Putative aminooxidase; 98.1 2.4E-06 8E-11 83.3 4.8 39 61-99 5-44 (424)
223 2bcg_G Secretory pathway GDP d 98.1 2.4E-06 8.2E-11 84.1 4.7 40 61-100 10-49 (453)
224 1mo9_A ORF3; nucleotide bindin 98.0 5.1E-06 1.7E-10 83.3 6.9 99 63-184 215-318 (523)
225 3ihm_A Styrene monooxygenase A 98.0 2.2E-06 7.6E-11 83.7 3.9 34 62-95 22-55 (430)
226 3cty_A Thioredoxin reductase; 98.0 1.7E-05 5.9E-10 73.9 9.9 90 232-336 18-127 (319)
227 3nks_A Protoporphyrinogen oxid 98.0 3.2E-06 1.1E-10 83.6 4.9 38 62-99 2-41 (477)
228 4fk1_A Putative thioredoxin re 98.0 2.2E-05 7.4E-10 72.8 10.2 91 232-336 8-118 (304)
229 1m6i_A Programmed cell death p 98.0 9E-06 3.1E-10 80.8 7.9 100 62-184 180-284 (493)
230 2gqf_A Hypothetical protein HI 98.0 2.9E-05 9.9E-10 74.9 11.1 89 232-335 6-168 (401)
231 3nrn_A Uncharacterized protein 98.0 3.2E-06 1.1E-10 82.3 4.4 52 284-335 189-243 (421)
232 2e1m_A L-glutamate oxidase; L- 98.0 4.5E-06 1.5E-10 79.5 5.2 39 61-99 43-82 (376)
233 3ka7_A Oxidoreductase; structu 98.0 3.4E-06 1.2E-10 82.1 4.5 53 284-336 196-253 (425)
234 1s3e_A Amine oxidase [flavin-c 98.0 3.1E-06 1.1E-10 84.8 4.3 39 62-100 4-42 (520)
235 4a5l_A Thioredoxin reductase; 98.0 2E-05 7E-10 73.1 9.6 91 232-336 6-122 (314)
236 1c0p_A D-amino acid oxidase; a 98.0 4.2E-06 1.4E-10 79.7 4.8 35 61-95 5-39 (363)
237 3o0h_A Glutathione reductase; 98.0 2E-05 6.9E-10 78.1 9.9 91 232-336 28-167 (484)
238 1hyu_A AHPF, alkyl hydroperoxi 98.0 2E-05 6.7E-10 78.9 9.8 92 231-336 213-327 (521)
239 3i6d_A Protoporphyrinogen oxid 98.0 2E-06 6.7E-11 84.9 2.5 38 62-99 5-48 (470)
240 1rsg_A FMS1 protein; FAD bindi 98.0 2.5E-06 8.4E-11 85.5 3.1 39 62-100 8-47 (516)
241 4dna_A Probable glutathione re 98.0 1.1E-05 3.9E-10 79.5 7.4 101 62-186 170-272 (463)
242 2oln_A NIKD protein; flavoprot 97.9 3.1E-06 1.1E-10 81.6 3.2 35 62-96 4-38 (397)
243 3dgh_A TRXR-1, thioredoxin red 97.9 1.6E-05 5.4E-10 78.9 8.2 102 62-185 187-292 (483)
244 2jae_A L-amino acid oxidase; o 97.9 6.1E-06 2.1E-10 82.0 5.0 39 61-99 10-48 (489)
245 2xve_A Flavin-containing monoo 97.9 1.8E-05 6.2E-10 78.0 8.2 86 62-188 197-282 (464)
246 1v0j_A UDP-galactopyranose mut 97.9 5.4E-06 1.8E-10 80.1 4.3 39 62-100 7-46 (399)
247 2x3n_A Probable FAD-dependent 97.9 4.1E-05 1.4E-09 73.8 10.6 91 232-336 8-167 (399)
248 4gcm_A TRXR, thioredoxin reduc 97.9 4.6E-05 1.6E-09 70.8 10.5 91 232-336 8-117 (312)
249 2ivd_A PPO, PPOX, protoporphyr 97.9 5.7E-06 1.9E-10 81.9 4.5 40 60-99 14-53 (478)
250 3dgz_A Thioredoxin reductase 2 97.9 1.9E-05 6.7E-10 78.3 8.1 102 62-185 185-290 (488)
251 2gf3_A MSOX, monomeric sarcosi 97.9 5.4E-06 1.9E-10 79.6 4.0 73 268-343 135-213 (389)
252 2yg5_A Putrescine oxidase; oxi 97.9 3.5E-06 1.2E-10 82.8 2.6 38 62-99 5-42 (453)
253 3l8k_A Dihydrolipoyl dehydroge 97.9 1.6E-05 5.3E-10 78.5 7.0 101 62-185 172-275 (466)
254 3hdq_A UDP-galactopyranose mut 97.9 7.4E-06 2.5E-10 78.6 4.4 39 61-99 28-66 (397)
255 4ap3_A Steroid monooxygenase; 97.9 4.5E-05 1.5E-09 76.7 10.2 91 232-336 23-162 (549)
256 3qfa_A Thioredoxin reductase 1 97.9 2.7E-05 9.1E-10 77.9 8.4 103 62-185 210-318 (519)
257 4at0_A 3-ketosteroid-delta4-5a 97.9 6.9E-06 2.3E-10 82.1 4.0 37 61-97 40-76 (510)
258 3c4a_A Probable tryptophan hyd 97.9 7.3E-06 2.5E-10 78.6 4.0 35 63-97 1-37 (381)
259 3gwf_A Cyclohexanone monooxyge 97.9 5E-05 1.7E-09 76.2 10.0 88 232-333 10-145 (540)
260 2i0z_A NAD(FAD)-utilizing dehy 97.8 8.9E-05 3E-09 72.7 11.6 90 232-335 28-191 (447)
261 3s5w_A L-ornithine 5-monooxyge 97.8 4.6E-05 1.6E-09 75.0 9.6 96 232-336 32-193 (463)
262 3lov_A Protoporphyrinogen oxid 97.8 9.4E-06 3.2E-10 80.3 4.5 38 62-99 4-43 (475)
263 2vvm_A Monoamine oxidase N; FA 97.8 1.1E-05 3.7E-10 80.3 4.9 38 62-99 39-76 (495)
264 2vdc_G Glutamate synthase [NAD 97.8 1.5E-05 5E-10 78.3 5.7 89 229-335 121-219 (456)
265 3uox_A Otemo; baeyer-villiger 97.8 5.5E-05 1.9E-09 76.0 10.0 91 232-336 11-150 (545)
266 2pyx_A Tryptophan halogenase; 97.8 8E-06 2.7E-10 81.9 3.9 35 61-95 6-52 (526)
267 1sez_A Protoporphyrinogen oxid 97.8 1.2E-05 4E-10 80.2 4.8 38 62-99 13-50 (504)
268 2bi7_A UDP-galactopyranose mut 97.8 1.3E-05 4.3E-10 77.0 4.9 38 62-99 3-40 (384)
269 4g6h_A Rotenone-insensitive NA 97.8 2.1E-05 7.1E-10 78.3 6.2 91 232-336 44-170 (502)
270 2e4g_A Tryptophan halogenase; 97.8 1.4E-05 4.7E-10 80.7 4.9 36 61-96 24-62 (550)
271 1i8t_A UDP-galactopyranose mut 97.8 1.2E-05 4.1E-10 76.7 4.2 37 63-99 2-38 (367)
272 3g5s_A Methylenetetrahydrofola 97.8 1.4E-05 4.7E-10 75.4 4.3 33 63-95 2-34 (443)
273 4dsg_A UDP-galactopyranose mut 97.8 1.4E-05 4.7E-10 79.3 4.4 39 61-99 8-47 (484)
274 2iid_A L-amino-acid oxidase; f 97.7 1.8E-05 6E-10 78.8 4.8 39 61-99 32-70 (498)
275 3k30_A Histamine dehydrogenase 97.7 2.8E-05 9.6E-10 80.6 6.4 101 62-184 523-626 (690)
276 1ryi_A Glycine oxidase; flavop 97.7 0.0001 3.4E-09 70.5 9.7 59 285-344 165-228 (382)
277 2weu_A Tryptophan 5-halogenase 97.7 1.3E-05 4.5E-10 80.0 3.6 34 62-95 2-38 (511)
278 3ces_A MNMG, tRNA uridine 5-ca 97.7 0.00016 5.5E-09 73.1 11.4 91 232-336 30-182 (651)
279 2qcu_A Aerobic glycerol-3-phos 97.7 1.6E-05 5.3E-10 79.3 4.0 34 62-95 3-36 (501)
280 3g3e_A D-amino-acid oxidase; F 97.7 1.2E-05 4.2E-10 76.1 3.0 34 63-96 1-40 (351)
281 3nix_A Flavoprotein/dehydrogen 97.7 0.00011 3.7E-09 71.3 9.7 90 232-335 7-166 (421)
282 1gte_A Dihydropyrimidine dehyd 97.7 2.4E-05 8.3E-10 84.6 4.8 91 230-336 187-289 (1025)
283 3axb_A Putative oxidoreductase 97.7 1.2E-05 4.1E-10 78.9 2.0 60 284-344 181-263 (448)
284 2x8g_A Thioredoxin glutathione 97.7 7.3E-05 2.5E-09 76.2 7.9 101 62-184 286-397 (598)
285 1k0i_A P-hydroxybenzoate hydro 97.7 0.00027 9.4E-09 67.8 11.6 91 232-336 4-164 (394)
286 3da1_A Glycerol-3-phosphate de 97.6 2.5E-05 8.6E-10 78.8 4.1 36 61-96 17-52 (561)
287 3jsk_A Cypbp37 protein; octame 97.6 0.00072 2.5E-08 63.1 13.7 159 232-405 81-333 (344)
288 1qo8_A Flavocytochrome C3 fuma 97.6 0.00034 1.2E-08 70.7 12.2 50 287-336 253-313 (566)
289 1chu_A Protein (L-aspartate ox 97.6 2.8E-05 9.6E-10 78.0 4.2 35 62-97 8-42 (540)
290 1y56_B Sarcosine oxidase; dehy 97.6 0.00017 5.8E-09 68.9 9.4 56 287-343 152-213 (382)
291 2zxi_A TRNA uridine 5-carboxym 97.6 0.0004 1.4E-08 70.0 12.2 90 232-335 29-180 (637)
292 2gjc_A Thiazole biosynthetic e 97.6 0.00026 8.8E-09 65.7 10.0 160 232-405 67-323 (326)
293 2z3y_A Lysine-specific histone 97.6 5.4E-05 1.9E-09 78.0 6.0 39 60-98 105-143 (662)
294 1d5t_A Guanine nucleotide diss 97.6 4E-05 1.4E-09 74.8 4.4 53 284-336 234-291 (433)
295 2xag_A Lysine-specific histone 97.6 5.9E-05 2E-09 79.3 5.9 39 60-98 276-314 (852)
296 2vou_A 2,6-dihydroxypyridine h 97.6 0.00024 8.1E-09 68.4 9.7 91 232-336 7-154 (397)
297 1yvv_A Amine oxidase, flavin-c 97.6 0.00045 1.5E-08 64.6 11.3 31 232-276 4-34 (336)
298 1cjc_A Protein (adrenodoxin re 97.6 6E-05 2E-09 74.1 5.3 89 231-336 7-107 (460)
299 2bs2_A Quinol-fumarate reducta 97.6 3.2E-05 1.1E-09 79.3 3.5 35 62-96 5-39 (660)
300 3cp8_A TRNA uridine 5-carboxym 97.5 0.00048 1.6E-08 69.7 11.7 91 232-336 23-175 (641)
301 1lqt_A FPRA; NADP+ derivative, 97.5 5.1E-05 1.7E-09 74.5 4.5 92 232-335 5-108 (456)
302 2wdq_A Succinate dehydrogenase 97.5 3.6E-05 1.2E-09 78.1 3.4 35 62-96 7-41 (588)
303 3i3l_A Alkylhalidase CMLS; fla 97.5 0.00054 1.9E-08 69.3 11.9 90 232-335 25-188 (591)
304 2h88_A Succinate dehydrogenase 97.5 3.8E-05 1.3E-09 78.2 3.4 35 62-96 18-52 (621)
305 2rgh_A Alpha-glycerophosphate 97.5 4.9E-05 1.7E-09 76.9 4.1 35 62-96 32-66 (571)
306 3p1w_A Rabgdi protein; GDI RAB 97.5 4.9E-05 1.7E-09 74.4 3.8 51 284-334 256-313 (475)
307 1y0p_A Fumarate reductase flav 97.5 0.00041 1.4E-08 70.2 10.6 50 286-335 257-317 (571)
308 1pn0_A Phenol 2-monooxygenase; 97.5 4.5E-05 1.6E-09 78.5 3.6 35 62-96 8-47 (665)
309 3gyx_A Adenylylsulfate reducta 97.5 5.2E-05 1.8E-09 77.7 3.8 34 62-95 22-61 (662)
310 2gag_B Heterotetrameric sarcos 97.5 0.00033 1.1E-08 67.3 9.3 58 285-343 175-238 (405)
311 2uzz_A N-methyl-L-tryptophan o 97.5 0.00049 1.7E-08 65.4 10.2 54 286-340 151-209 (372)
312 4gut_A Lysine-specific histone 97.5 6.4E-05 2.2E-09 78.4 4.2 38 61-98 335-372 (776)
313 2gf3_A MSOX, monomeric sarcosi 97.4 0.00056 1.9E-08 65.3 10.5 32 232-277 5-36 (389)
314 1jnr_A Adenylylsulfate reducta 97.4 7.7E-05 2.6E-09 76.5 4.3 35 62-96 22-60 (643)
315 2aqj_A Tryptophan halogenase, 97.4 0.0012 4.1E-08 66.2 12.8 48 288-335 169-222 (538)
316 1b37_A Protein (polyamine oxid 97.4 8.3E-05 2.8E-09 73.4 4.2 37 62-98 4-41 (472)
317 1w4x_A Phenylacetone monooxyge 97.4 0.0006 2.1E-08 68.4 10.3 90 232-335 18-154 (542)
318 3cgv_A Geranylgeranyl reductas 97.4 0.00048 1.6E-08 66.0 9.2 90 232-335 6-162 (397)
319 3fmw_A Oxygenase; mithramycin, 97.4 0.00071 2.4E-08 68.3 10.7 90 232-335 51-207 (570)
320 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00039 1.3E-08 71.8 8.9 29 62-90 494-522 (671)
321 3rp8_A Flavoprotein monooxygen 97.4 0.00074 2.5E-08 65.1 10.4 90 231-336 24-182 (407)
322 4hb9_A Similarities with proba 97.4 0.00091 3.1E-08 64.2 11.1 31 232-276 3-33 (412)
323 3atr_A Conserved archaeal prot 97.4 0.00033 1.1E-08 68.7 7.8 90 232-335 8-162 (453)
324 3ps9_A TRNA 5-methylaminomethy 97.3 0.0012 4.2E-08 68.1 12.2 57 290-346 423-484 (676)
325 1o94_A Tmadh, trimethylamine d 97.3 0.00016 5.3E-09 75.4 5.2 106 62-184 528-648 (729)
326 2xdo_A TETX2 protein; tetracyc 97.3 0.00077 2.6E-08 64.8 9.7 31 232-276 28-58 (398)
327 2gag_A Heterotetrameric sarcos 97.3 0.00026 8.8E-09 76.0 6.4 93 62-184 284-385 (965)
328 3qj4_A Renalase; FAD/NAD(P)-bi 97.3 0.00067 2.3E-08 63.7 8.6 36 297-332 122-162 (342)
329 1kdg_A CDH, cellobiose dehydro 97.3 0.00013 4.5E-09 73.4 3.8 36 61-96 6-41 (546)
330 4g65_A TRK system potassium up 97.3 0.0044 1.5E-07 60.6 14.6 34 62-95 3-36 (461)
331 3ihg_A RDME; flavoenzyme, anth 97.3 0.00095 3.3E-08 66.9 10.0 51 285-335 121-183 (535)
332 3c4n_A Uncharacterized protein 97.3 0.00055 1.9E-08 66.0 7.9 58 286-344 174-246 (405)
333 3e1t_A Halogenase; flavoprotei 97.2 0.0014 4.6E-08 65.4 10.1 50 286-335 113-172 (512)
334 2oln_A NIKD protein; flavoprot 97.2 0.0018 6.2E-08 62.1 10.7 55 288-343 157-216 (397)
335 2gmh_A Electron transfer flavo 97.2 0.0021 7.2E-08 65.0 11.5 52 285-336 145-218 (584)
336 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00014 4.9E-09 74.5 2.8 36 62-97 56-100 (721)
337 1d4d_A Flavocytochrome C fumar 97.2 0.0018 6.1E-08 65.5 10.8 51 286-336 257-318 (572)
338 3pvc_A TRNA 5-methylaminomethy 97.2 0.0024 8.2E-08 66.1 12.0 57 290-346 418-480 (689)
339 2qa2_A CABE, polyketide oxygen 97.1 0.0032 1.1E-07 62.4 12.2 91 231-335 13-166 (499)
340 1pj5_A N,N-dimethylglycine oxi 97.1 0.0018 6.3E-08 68.5 10.4 55 288-343 155-215 (830)
341 2qa1_A PGAE, polyketide oxygen 97.1 0.0036 1.2E-07 62.1 11.7 91 231-335 12-165 (500)
342 3t37_A Probable dehydrogenase; 97.0 0.00033 1.1E-08 70.1 4.1 35 62-96 17-52 (526)
343 3c96_A Flavin-containing monoo 97.0 0.0029 9.8E-08 61.0 10.6 91 232-336 6-170 (410)
344 3c4a_A Probable tryptophan hyd 97.0 0.00086 2.9E-08 64.1 6.4 31 232-276 2-34 (381)
345 1ju2_A HydroxynitrIle lyase; f 97.0 0.00037 1.3E-08 69.9 3.5 34 62-96 26-59 (536)
346 3nyc_A D-arginine dehydrogenas 96.9 0.0013 4.5E-08 62.5 7.0 55 288-343 158-217 (381)
347 3q9t_A Choline dehydrogenase a 96.9 0.00052 1.8E-08 69.2 4.1 35 62-96 6-41 (577)
348 2e4g_A Tryptophan halogenase; 96.9 0.0073 2.5E-07 60.6 12.5 50 286-335 196-252 (550)
349 1coy_A Cholesterol oxidase; ox 96.9 0.0006 2E-08 67.8 4.2 36 61-96 10-45 (507)
350 3dje_A Fructosyl amine: oxygen 96.9 0.0047 1.6E-07 60.0 10.5 55 285-339 162-225 (438)
351 2pyx_A Tryptophan halogenase; 96.9 0.0081 2.8E-07 60.0 12.3 48 288-335 179-233 (526)
352 3oz2_A Digeranylgeranylglycero 96.9 0.0054 1.8E-07 58.3 10.7 90 232-335 6-162 (397)
353 1y56_A Hypothetical protein PH 96.8 0.0011 3.7E-08 65.8 5.2 89 232-336 110-220 (493)
354 2weu_A Tryptophan 5-halogenase 96.8 0.0086 3E-07 59.5 11.9 51 285-335 174-230 (511)
355 1n4w_A CHOD, cholesterol oxida 96.7 0.00073 2.5E-08 67.2 3.3 37 62-98 5-41 (504)
356 3qvp_A Glucose oxidase; oxidor 96.7 0.001 3.5E-08 67.1 4.0 34 62-95 19-53 (583)
357 2qcu_A Aerobic glycerol-3-phos 96.7 0.0084 2.9E-07 59.4 10.6 55 286-340 151-215 (501)
358 3fim_B ARYL-alcohol oxidase; A 96.6 0.00081 2.8E-08 67.6 2.9 36 62-97 2-38 (566)
359 4at0_A 3-ketosteroid-delta4-5a 96.5 0.012 3.9E-07 58.6 10.6 51 285-335 203-264 (510)
360 1gpe_A Protein (glucose oxidas 96.5 0.002 6.8E-08 65.3 5.0 37 61-97 23-60 (587)
361 2jbv_A Choline oxidase; alcoho 96.5 0.0017 5.7E-08 65.2 4.3 35 62-96 13-48 (546)
362 2e5v_A L-aspartate oxidase; ar 96.4 0.011 3.9E-07 58.0 9.6 48 288-336 123-177 (472)
363 3fwz_A Inner membrane protein 96.4 0.0035 1.2E-07 50.4 4.8 35 61-95 6-40 (140)
364 3da1_A Glycerol-3-phosphate de 96.3 0.0092 3.1E-07 60.0 8.6 57 288-344 174-241 (561)
365 3llv_A Exopolyphosphatase-rela 96.2 0.0034 1.2E-07 50.5 4.0 34 62-95 6-39 (141)
366 2g1u_A Hypothetical protein TM 96.2 0.0044 1.5E-07 50.8 4.5 34 62-95 19-52 (155)
367 2dkh_A 3-hydroxybenzoate hydro 96.1 0.012 4E-07 60.3 8.4 51 285-335 142-211 (639)
368 1id1_A Putative potassium chan 96.1 0.0048 1.7E-07 50.4 4.3 33 62-94 3-35 (153)
369 1lss_A TRK system potassium up 96.0 0.0049 1.7E-07 49.2 4.1 34 62-95 4-37 (140)
370 3ic5_A Putative saccharopine d 95.9 0.0055 1.9E-07 47.2 3.7 34 62-95 5-39 (118)
371 3dfz_A SIRC, precorrin-2 dehyd 95.8 0.0085 2.9E-07 52.2 4.6 34 61-94 30-63 (223)
372 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0076 2.6E-07 58.9 4.6 35 61-95 8-42 (451)
373 2r0c_A REBC; flavin adenine di 95.7 0.052 1.8E-06 54.3 10.7 22 232-253 28-49 (549)
374 1pzg_A LDH, lactate dehydrogen 95.6 0.011 3.7E-07 55.1 4.8 36 61-96 8-44 (331)
375 3kkj_A Amine oxidase, flavin-c 95.5 0.0086 2.9E-07 53.4 4.0 38 361-408 292-329 (336)
376 2hmt_A YUAA protein; RCK, KTN, 95.5 0.0083 2.8E-07 48.0 3.4 33 62-94 6-38 (144)
377 1kyq_A Met8P, siroheme biosynt 95.3 0.0084 2.9E-07 53.9 3.0 35 61-95 12-46 (274)
378 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.015 5E-07 50.7 4.4 74 230-336 31-104 (223)
379 2x5o_A UDP-N-acetylmuramoylala 95.2 0.011 3.8E-07 57.5 3.7 35 62-96 5-39 (439)
380 1vg0_A RAB proteins geranylger 95.1 0.015 5.2E-07 58.8 4.6 39 61-99 7-45 (650)
381 4b63_A L-ornithine N5 monooxyg 95.0 0.052 1.8E-06 53.7 8.1 22 232-253 41-62 (501)
382 3c85_A Putative glutathione-re 95.0 0.019 6.3E-07 48.4 4.1 34 62-95 39-73 (183)
383 1pn0_A Phenol 2-monooxygenase; 94.8 0.099 3.4E-06 53.6 9.8 20 232-251 10-29 (665)
384 1f0y_A HCDH, L-3-hydroxyacyl-C 94.8 0.027 9.1E-07 51.7 4.8 35 62-96 15-49 (302)
385 3l4b_C TRKA K+ channel protien 94.7 0.02 6.7E-07 49.8 3.6 33 63-95 1-33 (218)
386 4dio_A NAD(P) transhydrogenase 94.7 0.027 9.1E-07 53.5 4.6 35 62-96 190-224 (405)
387 4e12_A Diketoreductase; oxidor 94.5 0.032 1.1E-06 50.7 4.7 35 62-96 4-38 (283)
388 3oj0_A Glutr, glutamyl-tRNA re 94.5 0.032 1.1E-06 44.9 4.2 34 62-95 21-54 (144)
389 3p2y_A Alanine dehydrogenase/p 94.3 0.029 1E-06 52.8 4.0 35 62-96 184-218 (381)
390 1kf6_A Fumarate reductase flav 94.3 0.047 1.6E-06 55.3 5.8 57 349-406 359-415 (602)
391 4ffl_A PYLC; amino acid, biosy 94.2 0.035 1.2E-06 52.3 4.5 35 62-96 1-35 (363)
392 3ado_A Lambda-crystallin; L-gu 94.2 0.027 9.3E-07 51.9 3.5 35 62-96 6-40 (319)
393 3i83_A 2-dehydropantoate 2-red 94.1 0.039 1.3E-06 51.1 4.4 33 63-95 3-35 (320)
394 4dgk_A Phytoene dehydrogenase; 94.1 0.027 9.1E-07 55.6 3.4 33 231-277 2-34 (501)
395 3eag_A UDP-N-acetylmuramate:L- 94.0 0.043 1.5E-06 51.0 4.4 35 62-96 4-39 (326)
396 3eag_A UDP-N-acetylmuramate:L- 93.9 0.15 5.1E-06 47.2 8.0 73 231-336 5-79 (326)
397 2a9f_A Putative malic enzyme ( 93.8 0.04 1.4E-06 51.8 3.9 33 62-94 188-221 (398)
398 2ew2_A 2-dehydropantoate 2-red 93.8 0.045 1.5E-06 50.3 4.2 33 63-95 4-36 (316)
399 2dpo_A L-gulonate 3-dehydrogen 93.8 0.042 1.4E-06 50.8 4.0 35 62-96 6-40 (319)
400 3doj_A AT3G25530, dehydrogenas 93.7 0.057 1.9E-06 49.7 4.6 36 61-96 20-55 (310)
401 1x13_A NAD(P) transhydrogenase 93.7 0.052 1.8E-06 51.9 4.5 35 62-96 172-206 (401)
402 3tl2_A Malate dehydrogenase; c 93.7 0.06 2E-06 49.6 4.7 34 61-94 7-41 (315)
403 3ghy_A Ketopantoate reductase 93.6 0.051 1.8E-06 50.6 4.2 33 62-94 3-35 (335)
404 1bg6_A N-(1-D-carboxylethyl)-L 93.6 0.053 1.8E-06 50.9 4.4 34 62-95 4-37 (359)
405 3k96_A Glycerol-3-phosphate de 93.6 0.061 2.1E-06 50.6 4.6 36 61-96 28-63 (356)
406 1lld_A L-lactate dehydrogenase 93.5 0.055 1.9E-06 50.0 4.3 33 63-95 8-42 (319)
407 3hn2_A 2-dehydropantoate 2-red 93.5 0.045 1.5E-06 50.4 3.6 33 63-95 3-35 (312)
408 1l7d_A Nicotinamide nucleotide 93.4 0.064 2.2E-06 51.0 4.7 36 61-96 171-206 (384)
409 3vtf_A UDP-glucose 6-dehydroge 93.4 0.064 2.2E-06 51.7 4.6 35 61-95 20-54 (444)
410 3gg2_A Sugar dehydrogenase, UD 93.4 0.058 2E-06 52.5 4.4 33 63-95 3-35 (450)
411 3k6j_A Protein F01G10.3, confi 93.4 0.14 4.7E-06 49.7 6.9 36 61-96 53-88 (460)
412 1vl6_A Malate oxidoreductase; 93.4 0.053 1.8E-06 50.9 3.9 34 61-94 191-225 (388)
413 3lk7_A UDP-N-acetylmuramoylala 93.4 0.095 3.2E-06 51.0 5.9 85 230-345 9-98 (451)
414 1jw9_B Molybdopterin biosynthe 93.4 0.055 1.9E-06 48.1 3.8 34 62-95 31-65 (249)
415 2ewd_A Lactate dehydrogenase,; 93.3 0.066 2.3E-06 49.4 4.4 35 62-96 4-39 (317)
416 1t2d_A LDH-P, L-lactate dehydr 93.2 0.078 2.7E-06 49.0 4.8 35 62-96 4-39 (322)
417 1pjq_A CYSG, siroheme synthase 93.2 0.057 1.9E-06 52.6 4.0 34 62-95 12-45 (457)
418 2raf_A Putative dinucleotide-b 93.2 0.078 2.7E-06 45.7 4.5 35 62-96 19-53 (209)
419 2o3j_A UDP-glucose 6-dehydroge 93.2 0.068 2.3E-06 52.5 4.4 34 62-95 9-44 (481)
420 1ks9_A KPA reductase;, 2-dehyd 93.1 0.076 2.6E-06 48.1 4.4 33 64-96 2-34 (291)
421 3gvi_A Malate dehydrogenase; N 93.0 0.085 2.9E-06 48.7 4.6 36 61-96 6-42 (324)
422 2y0c_A BCEC, UDP-glucose dehyd 92.9 0.077 2.6E-06 52.0 4.4 33 63-95 9-41 (478)
423 3g79_A NDP-N-acetyl-D-galactos 92.9 0.085 2.9E-06 51.5 4.6 35 62-96 18-54 (478)
424 4dll_A 2-hydroxy-3-oxopropiona 92.9 0.081 2.8E-06 48.9 4.3 35 61-95 30-64 (320)
425 1pjc_A Protein (L-alanine dehy 92.8 0.075 2.6E-06 50.1 4.1 33 63-95 168-200 (361)
426 2hjr_A Malate dehydrogenase; m 92.8 0.091 3.1E-06 48.7 4.6 34 63-96 15-49 (328)
427 3qha_A Putative oxidoreductase 92.8 0.086 2.9E-06 48.1 4.4 35 62-96 15-49 (296)
428 1chu_A Protein (L-aspartate ox 92.8 0.12 4.1E-06 51.6 5.7 56 349-405 354-409 (540)
429 3pid_A UDP-glucose 6-dehydroge 92.7 0.097 3.3E-06 50.3 4.7 35 61-96 35-69 (432)
430 3e8x_A Putative NAD-dependent 92.7 0.088 3E-06 46.1 4.1 35 61-95 20-55 (236)
431 3ius_A Uncharacterized conserv 92.7 0.097 3.3E-06 47.2 4.5 34 62-95 5-38 (286)
432 3ihm_A Styrene monooxygenase A 92.7 0.075 2.6E-06 51.4 4.0 31 232-276 24-54 (430)
433 1y6j_A L-lactate dehydrogenase 92.6 0.096 3.3E-06 48.3 4.5 34 62-95 7-42 (318)
434 3ggo_A Prephenate dehydrogenas 92.6 0.11 3.9E-06 47.8 4.9 35 61-95 32-68 (314)
435 3qsg_A NAD-binding phosphogluc 92.6 0.077 2.6E-06 48.9 3.7 34 61-94 23-57 (312)
436 2iid_A L-amino-acid oxidase; f 92.5 0.19 6.4E-06 49.4 6.7 32 231-276 34-65 (498)
437 1ur5_A Malate dehydrogenase; o 92.5 0.1 3.5E-06 47.9 4.5 33 63-95 3-36 (309)
438 2v6b_A L-LDH, L-lactate dehydr 92.5 0.094 3.2E-06 48.1 4.2 33 63-95 1-35 (304)
439 3gpi_A NAD-dependent epimerase 92.5 0.099 3.4E-06 47.2 4.3 35 62-96 3-37 (286)
440 4huj_A Uncharacterized protein 92.5 0.062 2.1E-06 46.7 2.8 35 62-96 23-58 (220)
441 3g17_A Similar to 2-dehydropan 92.4 0.06 2E-06 49.1 2.7 33 63-95 3-35 (294)
442 3p7m_A Malate dehydrogenase; p 92.4 0.12 4.2E-06 47.6 4.8 35 62-96 5-40 (321)
443 3d0o_A L-LDH 1, L-lactate dehy 92.4 0.1 3.5E-06 48.1 4.3 34 61-94 5-40 (317)
444 3l9w_A Glutathione-regulated p 92.3 0.093 3.2E-06 50.3 4.1 35 62-96 4-38 (413)
445 2bs2_A Quinol-fumarate reducta 92.3 0.15 5E-06 52.2 5.7 57 349-406 372-428 (660)
446 3ego_A Probable 2-dehydropanto 92.3 0.12 4E-06 47.5 4.6 32 63-95 3-34 (307)
447 3l6d_A Putative oxidoreductase 92.3 0.13 4.6E-06 47.1 5.0 34 62-95 9-42 (306)
448 3orq_A N5-carboxyaminoimidazol 92.2 0.17 5.8E-06 47.9 5.7 36 61-96 11-46 (377)
449 2aef_A Calcium-gated potassium 92.2 0.083 2.8E-06 46.3 3.3 33 62-95 9-41 (234)
450 2eez_A Alanine dehydrogenase; 92.1 0.12 3.9E-06 48.9 4.4 34 62-95 166-199 (369)
451 3pqe_A L-LDH, L-lactate dehydr 92.1 0.12 4E-06 47.9 4.3 34 62-95 5-40 (326)
452 1zcj_A Peroxisomal bifunctiona 92.1 0.14 4.9E-06 49.9 5.1 35 62-96 37-71 (463)
453 3ego_A Probable 2-dehydropanto 92.1 0.31 1.1E-05 44.6 7.2 74 232-333 4-77 (307)
454 3i83_A 2-dehydropantoate 2-red 92.0 0.49 1.7E-05 43.5 8.6 76 232-336 4-84 (320)
455 3fwz_A Inner membrane protein 92.0 0.41 1.4E-05 38.0 7.0 76 231-335 8-83 (140)
456 1zej_A HBD-9, 3-hydroxyacyl-CO 92.0 0.14 4.7E-06 46.6 4.6 35 61-96 11-45 (293)
457 2uyy_A N-PAC protein; long-cha 92.0 0.14 4.7E-06 47.2 4.7 34 62-95 30-63 (316)
458 3nrn_A Uncharacterized protein 91.9 0.13 4.5E-06 49.4 4.7 32 232-277 2-33 (421)
459 4id9_A Short-chain dehydrogena 91.9 0.1 3.5E-06 48.6 3.8 37 60-96 17-54 (347)
460 1nyt_A Shikimate 5-dehydrogena 91.9 0.13 4.6E-06 46.2 4.4 33 62-94 119-151 (271)
461 3phh_A Shikimate dehydrogenase 91.9 0.14 4.8E-06 45.8 4.4 34 62-95 118-151 (269)
462 3dhn_A NAD-dependent epimerase 91.9 0.14 4.7E-06 44.3 4.4 34 62-95 4-38 (227)
463 4aj2_A L-lactate dehydrogenase 91.9 0.14 4.7E-06 47.4 4.5 34 61-94 18-53 (331)
464 1evy_A Glycerol-3-phosphate de 91.9 0.1 3.5E-06 49.2 3.7 32 64-95 17-48 (366)
465 2vhw_A Alanine dehydrogenase; 91.8 0.13 4.5E-06 48.7 4.4 35 61-95 167-201 (377)
466 2qyt_A 2-dehydropantoate 2-red 91.8 0.086 2.9E-06 48.5 3.1 31 63-93 9-45 (317)
467 1mv8_A GMD, GDP-mannose 6-dehy 91.8 0.11 3.8E-06 50.3 3.9 32 64-95 2-33 (436)
468 3dtt_A NADP oxidoreductase; st 91.7 0.14 4.8E-06 45.2 4.2 36 61-96 18-53 (245)
469 3g0o_A 3-hydroxyisobutyrate de 91.7 0.14 4.9E-06 46.8 4.4 34 62-95 7-40 (303)
470 1guz_A Malate dehydrogenase; o 91.6 0.15 5.3E-06 46.8 4.5 34 63-96 1-36 (310)
471 1dlj_A UDP-glucose dehydrogena 91.5 0.15 5.2E-06 48.7 4.5 31 64-95 2-32 (402)
472 2egg_A AROE, shikimate 5-dehyd 91.5 0.17 5.7E-06 46.2 4.7 33 62-94 141-174 (297)
473 1hdo_A Biliverdin IX beta redu 91.5 0.17 5.9E-06 42.8 4.5 33 63-95 4-37 (206)
474 1ldn_A L-lactate dehydrogenase 91.5 0.16 5.4E-06 46.8 4.5 34 62-95 6-41 (316)
475 3c24_A Putative oxidoreductase 91.5 0.2 6.9E-06 45.3 5.2 33 63-95 12-45 (286)
476 3ka7_A Oxidoreductase; structu 91.5 0.14 5E-06 49.0 4.4 32 232-277 2-33 (425)
477 3hwr_A 2-dehydropantoate 2-red 91.5 0.48 1.6E-05 43.6 7.8 77 232-335 21-98 (318)
478 3vku_A L-LDH, L-lactate dehydr 91.5 0.15 5.1E-06 47.1 4.2 35 61-95 8-44 (326)
479 1c0p_A D-amino acid oxidase; a 91.4 0.16 5.5E-06 47.6 4.6 31 232-276 8-38 (363)
480 2vns_A Metalloreductase steap3 91.4 0.14 4.8E-06 44.3 3.8 33 63-95 29-61 (215)
481 3pef_A 6-phosphogluconate dehy 91.4 0.15 5.2E-06 46.2 4.3 34 63-96 2-35 (287)
482 4e21_A 6-phosphogluconate dehy 91.4 0.16 5.4E-06 47.7 4.4 35 61-95 21-55 (358)
483 4a7p_A UDP-glucose dehydrogena 91.3 0.15 5.2E-06 49.3 4.3 34 63-96 9-42 (446)
484 3dme_A Conserved exported prot 91.3 0.13 4.4E-06 48.1 3.7 32 232-277 6-37 (369)
485 1pjq_A CYSG, siroheme synthase 91.2 0.23 7.7E-06 48.4 5.5 73 230-335 12-84 (457)
486 3g5s_A Methylenetetrahydrofola 91.2 0.16 5.5E-06 48.0 4.2 42 356-407 321-362 (443)
487 2i6t_A Ubiquitin-conjugating e 91.2 0.15 5.2E-06 46.6 4.0 33 63-95 15-49 (303)
488 2h78_A Hibadh, 3-hydroxyisobut 91.2 0.15 5.1E-06 46.6 4.0 34 62-95 3-36 (302)
489 2q3e_A UDP-glucose 6-dehydroge 91.2 0.14 4.9E-06 50.0 4.0 33 63-95 6-40 (467)
490 3pdu_A 3-hydroxyisobutyrate de 91.1 0.12 4.2E-06 46.8 3.3 34 63-96 2-35 (287)
491 4ezb_A Uncharacterized conserv 91.1 0.16 5.6E-06 46.7 4.2 34 62-95 24-58 (317)
492 1jay_A Coenzyme F420H2:NADP+ o 91.1 0.18 6.3E-06 43.2 4.3 32 64-95 2-34 (212)
493 3ldh_A Lactate dehydrogenase; 91.0 0.26 8.9E-06 45.5 5.4 34 62-95 21-56 (330)
494 2pv7_A T-protein [includes: ch 91.0 0.26 8.8E-06 45.0 5.4 33 63-95 22-55 (298)
495 1z82_A Glycerol-3-phosphate de 91.0 0.18 6E-06 46.9 4.3 34 62-95 14-47 (335)
496 1x0v_A GPD-C, GPDH-C, glycerol 90.8 0.11 3.7E-06 48.7 2.7 35 62-96 8-49 (354)
497 2g1u_A Hypothetical protein TM 90.8 0.25 8.6E-06 40.0 4.6 33 230-276 19-51 (155)
498 3hwr_A 2-dehydropantoate 2-red 90.7 0.19 6.5E-06 46.3 4.2 32 62-94 19-50 (318)
499 3fi9_A Malate dehydrogenase; s 90.7 0.2 6.8E-06 46.6 4.3 34 62-95 8-44 (343)
500 3gyx_A Adenylylsulfate reducta 90.7 0.18 6.1E-06 51.5 4.3 43 356-406 446-488 (662)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=8.8e-51 Score=406.60 Aligned_cols=336 Identities=34% Similarity=0.608 Sum_probs=277.3
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
+.+++|||||||+||+++|..|++.+++|+|||+++++.|+|+++..+.|..+..+...++.++. .....++.|+.++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~--~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFA--LKKKGNVTYYEAE 117 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHH--TTCSSCEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHH--HhhcCCeEEEEEE
Confidence 45679999999999999999999999999999999999999999999988887777666655432 2345679999999
Q ss_pred eEeEeCCCCEEEEEEecCC---------cccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHH
Q 013810 140 CAGIDTDNHVVHCETVTDE---------LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 210 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g---------~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 210 (436)
|++||++.+.|.+...... ......+..++.||+||||||+.++.+++||.+++.+.++++.++..+++.+
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l 197 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTF 197 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHH
Confidence 9999999999987642110 0000111237999999999999999999999988899999999999999888
Q ss_pred HHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHH
Q 013810 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHY 289 (436)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~ 289 (436)
..++.....+......++...+++|||||++|+|+|.+|++++...+++.++......+|+|+++. .+++.+++++.+.
T Consensus 198 ~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~ 277 (502)
T 4g6h_A 198 AANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSY 277 (502)
T ss_dssp HHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHH
T ss_pred HHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHH
Confidence 666555444333333345556899999999999999999998877666666655566899999995 6889999999999
Q ss_pred HHHHHHhcCCEEEecc-eEEEeCCeEEE----cCC----cEEecceEEEecCCCCchh----cccCCCCCCCCCcEEeCC
Q 013810 290 ATTQLSKSGVRLVRGI-VKDVDSQKLIL----NDG----TEVPYGLLVWSTGVGPSTL----VKSLDLPKSPGGRIGIDE 356 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~-v~~i~~~~v~~----~~g----~~i~~D~vi~a~G~~p~~~----~~~~~l~~~~~G~i~vd~ 356 (436)
+.+.|++.||++++++ |++++++.+.+ .|| +++++|+||||+|.+|+++ ...+++..+.+|+|.||+
T Consensus 278 ~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~ 357 (502)
T 4g6h_A 278 AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVND 357 (502)
T ss_dssp HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCT
T ss_pred HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECC
Confidence 9999999999999995 99999887655 355 3699999999999999853 445567778889999999
Q ss_pred CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 357 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 357 ~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
+||++++|||||+|||+..+ .|++++.|.+||+.+|+||..
T Consensus 358 ~lq~~~~~~IfAiGD~a~~~-------~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFAG-------LPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp TSBBTTCSSEEECGGGEESS-------SCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEcccCCC-------CCCchHHHHHHHHHHHHHHHH
Confidence 99977999999999999864 388999999999999999964
No 2
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.4e-46 Score=368.33 Aligned_cols=324 Identities=18% Similarity=0.245 Sum_probs=261.8
Q ss_pred CcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCcceec-chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS- 138 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (436)
+|||||||||||++||.+|++.| .+|+|||+++++.|. +.++....+....... .+......+.+..++.++..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRY--ALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGG--TBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhh--hhhcCHHHHHHhcCCEEEeCC
Confidence 47999999999999999999977 569999999887765 3444333332221111 11111122344567887664
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccC
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (436)
+|+.+|.+.+.+.+.....+. ..++.||+||||||++|+.|++|| ++.+..++..++..+.+.+..
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~------~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~------ 144 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNE------QFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA------ 144 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTE------EEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH------
T ss_pred eEEEEEccCcEEEEEeccCCc------eEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc------
Confidence 899999999988876543332 236899999999999999999988 567778888888888776521
Q ss_pred CCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhc
Q 013810 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKS 297 (436)
Q Consensus 219 ~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~ 297 (436)
..+++++|||+|++|+|+|..+++++ .+|+++++. .+++.+++++.+.+.+.+++.
T Consensus 145 ---------~~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~ 201 (437)
T 4eqs_A 145 ---------NQVDKVLVVGAGYVSLEVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELDKR 201 (437)
T ss_dssp ---------HTCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHHHT
T ss_pred ---------cCCcEEEEECCccchhhhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhhcc
Confidence 23458999999999999999999987 899999995 678889999999999999999
Q ss_pred CCEEEecc-eEEEeCCeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEecccccc
Q 013810 298 GVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGY 375 (436)
Q Consensus 298 gV~i~~~~-v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~ 375 (436)
||+++.+. |++++++.+.+++|+++++|.|++|+|++|+ .+++..|++++++|+|.||+++| |++|||||+|||+..
T Consensus 202 gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~-Ts~p~IyA~GDva~~ 280 (437)
T 4eqs_A 202 EIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFE-TNVPNIYAIGDIATS 280 (437)
T ss_dssp TCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCB-CSSTTEEECGGGEEE
T ss_pred ceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCcc-CCCCCEEEEEEccCc
Confidence 99999995 9999999999999999999999999999999 68889999999999999999999 999999999999998
Q ss_pred cc-CCCCccCCccHHHHHHHHHHHHhhhhhhc---------CCceeeecchhHHHHHHHhh
Q 013810 376 LE-STGKTVLPALAQVSYEQLHLFQKPSFLLA---------RNWCWFFDVCSLTSILNRLQ 426 (436)
Q Consensus 376 ~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~---------~~~~~~~~~~~~~~~~~~~~ 426 (436)
+. .++.+..+++++.|.+||+.||+||+... .+++.+++..+.++|++..+
T Consensus 281 ~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~ 341 (437)
T 4eqs_A 281 HYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNE 341 (437)
T ss_dssp EBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTTCCCCCBCCCEEEEETTEEEEEEESCGGG
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHcCCCCcccccceeEEeeeeccceEEEeeCCHHH
Confidence 76 46777778899999999999999998532 23455777777777766543
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.1e-43 Score=344.96 Aligned_cols=300 Identities=20% Similarity=0.320 Sum_probs=246.8
Q ss_pred CcEEEECCchHHHHHHHhcccCCCe--EEEEcCCCcceec-chhh-hhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~--v~lie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
++|||||||+||++||..|++.|++ |+|||+++++.|. |.+. ....+......+ .. ...+....++.++.+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~----~~~~~~~~~i~~~~~ 77 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LA----EADWYGEARIDMLTG 77 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SS----CTTHHHHTTCEEEES
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cC----CHHHHHHCCCEEEeC
Confidence 5899999999999999999999987 9999999988775 3333 344443333332 11 122334568999888
Q ss_pred -EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccc
Q 013810 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
+|+.++...+.+.+. ++. ++.||+||||||+.|+.|++||.+ ++++++++..++..+...+
T Consensus 78 ~~v~~id~~~~~v~~~---~g~--------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~------ 140 (410)
T 3ef6_A 78 PEVTALDVQTRTISLD---DGT--------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW------ 140 (410)
T ss_dssp CCEEEEETTTTEEEET---TSC--------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC------
T ss_pred CEEEEEECCCCEEEEC---CCC--------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh------
Confidence 999999998888663 565 899999999999999999999986 6778888999888877653
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-cccHHHHHHHHHHH
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYATTQL 294 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~-~~~~~~~~~~~~~l 294 (436)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+ +++ .+++++.+.+.+.+
T Consensus 141 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l 195 (410)
T 3ef6_A 141 -----------TSATRLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLL 195 (410)
T ss_dssp -----------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHH
T ss_pred -----------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHH
Confidence 33459999999999999999999876 8999999964 444 47889999999999
Q ss_pred HhcCCEEEecc-eEEEeCC----eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 295 SKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
++.||+++.+. |++++.+ .|+++||++++||.||+|+|++|+ ++++.++++.+ +| |.||+++| |+.|+|||
T Consensus 196 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~-t~~~~IyA 272 (410)
T 3ef6_A 196 TELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD-RG-VIVDHCGA-TLAKGVFA 272 (410)
T ss_dssp HHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS-SS-EECCTTSB-CSSTTEEE
T ss_pred HHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC-Ce-EEEccCee-ECCCCEEE
Confidence 99999999984 9888764 688999999999999999999999 68899999887 55 99999999 89999999
Q ss_pred eccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc-----CCceee
Q 013810 369 VGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA-----RNWCWF 412 (436)
Q Consensus 369 ~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~-----~~~~~~ 412 (436)
+|||+..+...|.+..+.++..|..||+.||+||.... .+++|.
T Consensus 273 ~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~ 321 (410)
T 3ef6_A 273 VGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWT 321 (410)
T ss_dssp CGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCCCCCCBCCEEEE
T ss_pred EEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCCCCCCCCCeeEE
Confidence 99999976644555567789999999999999998543 456665
No 4
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.2e-43 Score=344.07 Aligned_cols=298 Identities=17% Similarity=0.255 Sum_probs=244.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee-cchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF-TPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS- 138 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (436)
+++||||||||+||++||..|+..+.+|+|||+++++.| .|.++..+.+.....++.... ..+....++.++.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~----~~~~~~~~i~~~~~~ 83 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKK----NDWYEKNNIKVITSE 83 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSC----HHHHHHTTCEEECSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCC----HHHHHHCCCEEEeCC
Confidence 457899999999999999999888999999999998876 566766666554444332222 22344568888876
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccC
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (436)
+|+.+|++.+.+.+. +|. ++.||+||||||++|+.|++||.+ +++++++.+++..+...+
T Consensus 84 ~V~~id~~~~~v~~~---~g~--------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l-------- 143 (385)
T 3klj_A 84 FATSIDPNNKLVTLK---SGE--------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDEC-------- 143 (385)
T ss_dssp CEEEEETTTTEEEET---TSC--------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHH--------
T ss_pred EEEEEECCCCEEEEC---CCC--------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHh--------
Confidence 899999999888763 665 899999999999999999999986 888899999999888765
Q ss_pred CCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCc-ccHHHHHHHHHHHHh
Q 013810 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQLSK 296 (436)
Q Consensus 219 ~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l~~ 296 (436)
..+++|+|||+|++|+|+|..|++.+ .+|+++++. .+++. +++++.+.+.+.+++
T Consensus 144 ---------~~~~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~ 200 (385)
T 3klj_A 144 ---------KNKGKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLDR 200 (385)
T ss_dssp ---------HHHSCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHHT
T ss_pred ---------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHh
Confidence 23459999999999999999999877 899999995 45654 899999999999999
Q ss_pred cCCEEEecc-eEEEeCCeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccc
Q 013810 297 SGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 374 (436)
Q Consensus 297 ~gV~i~~~~-v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~ 374 (436)
.||+++.+. +.++ |+++++|.||+|+|++|+ ++++.++++.+ +| |.||+++| |+.|+|||+|||+.
T Consensus 201 ~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~-~g-i~vd~~~~-t~~~~IyA~GD~a~ 268 (385)
T 3klj_A 201 LGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIASK-RG-ILVNDHME-TSIKDIYACGDVAE 268 (385)
T ss_dssp TTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECCGGGTTSCCCBS-SS-EEECTTCB-CSSTTEEECGGGEE
T ss_pred CCCEEEeCCEEEEc---------CeEEecCeEEECcCcccChhhhhhcCCCcC-CC-EEECCCcc-cCCCCEEEEEeeEe
Confidence 999999984 6665 678999999999999999 68888898876 45 99999999 89999999999998
Q ss_pred cccCCCCccCCccHHHHHHHHHHHHhhhhhhc------CCceee--ecchhHHHHH
Q 013810 375 YLESTGKTVLPALAQVSYEQLHLFQKPSFLLA------RNWCWF--FDVCSLTSIL 422 (436)
Q Consensus 375 ~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~------~~~~~~--~~~~~~~~~~ 422 (436)
.+. ..++++..|..||+.||+||.... .+++|+ ++......|+
T Consensus 269 ~~~-----~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~~G~ 319 (385)
T 3klj_A 269 FYG-----KNPGLINIANKQGEVAGLNACGEDASYSEIIPSPILKVSGISIISCGD 319 (385)
T ss_dssp ETT-----BCCCCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCEEEETTEEEEEESC
T ss_pred cCC-----CcccHHHHHHHHHHHHHHHhcCCCcCCCCCCCcEEEEeCCCcEEEEcC
Confidence 542 126789999999999999998532 356666 5655555553
No 5
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.2e-42 Score=341.60 Aligned_cols=303 Identities=22% Similarity=0.401 Sum_probs=247.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCe--EEEEcCCCcceec-chhh-hhhcCcccccccccchhhcchhhhcCCCcEEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~--v~lie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (436)
++++|||||||+||++||..|++.|++ |+|||+++++.|. |.+. ....+......+.. ....+....++.++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 83 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICI----RPAQFWEDKAVEMK 83 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBS----SCHHHHHHTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhcc----CCHHHHHHCCcEEE
Confidence 357999999999999999999999987 9999999987775 3332 33333333322211 12223445788998
Q ss_pred Ee-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhc
Q 013810 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (436)
Q Consensus 137 ~~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (436)
.+ +|+.++...+.+.+. ++. .+.||+||||||+.|+.|++||.+ .++++..+..++..+...+
T Consensus 84 ~~~~v~~id~~~~~v~~~---~g~--------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~---- 148 (415)
T 3lxd_A 84 LGAEVVSLDPAAHTVKLG---DGS--------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAEL---- 148 (415)
T ss_dssp ETCCEEEEETTTTEEEET---TSC--------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHH----
T ss_pred eCCEEEEEECCCCEEEEC---CCC--------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHh----
Confidence 87 999999998888763 565 899999999999999999999986 6778888999988887765
Q ss_pred cccCCCCCChhhhcc-cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHHHH
Q 013810 215 MLSDVPGISEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYAT 291 (436)
Q Consensus 215 ~~~~~p~~~~~~~~~-~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~ 291 (436)
.. +++++|||+|++|+|+|..+.+.+ .+|+++++. .+++ .+++++.+.+.
T Consensus 149 -------------~~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~ 201 (415)
T 3lxd_A 149 -------------DAGAKNAVVIGGGYIGLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQ 201 (415)
T ss_dssp -------------HTTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHH
T ss_pred -------------hhcCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHH
Confidence 22 459999999999999999999876 899999995 4554 47899999999
Q ss_pred HHHHhcCCEEEecc-eEEEeCC-----eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCC
Q 013810 292 TQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQ 364 (436)
Q Consensus 292 ~~l~~~gV~i~~~~-v~~i~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~ 364 (436)
+.+++.||+++.+. |++++.+ .|++++|++++||.||+|+|++|+ ++++.++++.+ +| |.||+++| |+.|
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~vd~~~~-t~~~ 278 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG-NG-VDVDEFCR-TSLT 278 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS-SS-EECCTTCB-CSST
T ss_pred HHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC-CC-EEECCCCC-cCCC
Confidence 99999999999984 8888653 578899999999999999999999 58888999877 55 99999999 8999
Q ss_pred CEEEeccccccccC-C-CCccCCccHHHHHHHHHHHHhhhhhhc-----CCceee
Q 013810 365 DVFAVGDCSGYLES-T-GKTVLPALAQVSYEQLHLFQKPSFLLA-----RNWCWF 412 (436)
Q Consensus 365 ~Vya~GD~~~~~~~-~-~~~~~~~~~~~A~~~g~~aa~~i~~~~-----~~~~~~ 412 (436)
+|||+|||+..+.. . |.+.+..++..|..||+.||+||.... .++||.
T Consensus 279 ~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~ 333 (415)
T 3lxd_A 279 DVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAPVPYKATPWFWS 333 (415)
T ss_dssp TEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCCCCCCCCCEEEE
T ss_pred CEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCCCCCCCCCeeEe
Confidence 99999999998763 3 666667789999999999999998643 457775
No 6
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=9.3e-43 Score=343.54 Aligned_cols=307 Identities=21% Similarity=0.298 Sum_probs=242.5
Q ss_pred CcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (436)
++|||||||+||++||.+|++.+ ++|||||+++++.|+|.++....|.....++..++..+ ....+++++.++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~----~~~~gv~~i~~~v 78 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL----LPKFNIEFINEKA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT----GGGGTEEEECSCE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHH----HHHCCcEEEEeEE
Confidence 68999999999999999998854 78999999999999999998888888777766665554 3456899999999
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (436)
++||++.+.|.+. +|+ +++||+||||||+++. +++||.+++.+.+++.+++.++++.+...
T Consensus 79 ~~Id~~~~~V~~~---~g~--------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~------- 139 (430)
T 3hyw_A 79 ESIDPDANTVTTQ---SGK--------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQEL------- 139 (430)
T ss_dssp EEEETTTTEEEET---TCC--------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHH-------
T ss_pred EEEECCCCEEEEC---CCC--------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhh-------
Confidence 9999999998764 666 8999999999999864 57999888888999999999988876421
Q ss_pred CCChhhhcccCcEEEECCCh------HHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC----cccHHHHHHH
Q 013810 221 GISEEEKSRLLHCVVVGGGP------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----SFDDRLRHYA 290 (436)
Q Consensus 221 ~~~~~~~~~~~~vvViG~G~------~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~----~~~~~~~~~~ 290 (436)
...+.++|+|++. .+.|+|..+.... ++ ...+...+|++++..+.+. ...+...+.+
T Consensus 140 -------~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l----~~--~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l 206 (430)
T 3hyw_A 140 -------YANPGPVVIGAIPGVSCFGPAYEFALMLHYEL----KK--RGIRYKVPMTFITSEPYLGHFGVGGIGASKRLV 206 (430)
T ss_dssp -------HHSCCCEEEEECTTCCCCHHHHHHHHHHHHHH----HH--TTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHH
T ss_pred -------ccCCceEEEeCCCcEEEhHHHHHHHHHHHHHH----HH--hcccccceeeeecccchhhhccchhhHHHHHHH
Confidence 1122455665543 2344444444322 12 1223457899998865443 3456778889
Q ss_pred HHHHHhcCCEEEecc-eEEEeCCeEEEcC----CcEEecceEEEecCCCCchhcccCCC--CCCCCCcEEeCCCCCCCCC
Q 013810 291 TTQLSKSGVRLVRGI-VKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSLDL--PKSPGGRIGIDEWLRVPSV 363 (436)
Q Consensus 291 ~~~l~~~gV~i~~~~-v~~i~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~~~l--~~~~~G~i~vd~~~~~t~~ 363 (436)
++.++++||+++.+. |++++.+++.+++ ++++++|++++++|++|++++...++ ..+.+|+|.||++||+|++
T Consensus 207 ~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~ 286 (430)
T 3hyw_A 207 EDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTY 286 (430)
T ss_dssp HHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSS
T ss_pred HHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCC
Confidence 999999999999995 9999999888764 34799999999999999987776654 4456788999999999999
Q ss_pred CCEEEeccccccccCCCC---ccCCccHHHHHHHHHHHHhhhhhh
Q 013810 364 QDVFAVGDCSGYLESTGK---TVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 364 ~~Vya~GD~~~~~~~~~~---~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
|||||+|||+..++..+. ...|++++.|.+||+.+|+||...
T Consensus 287 ~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~ 331 (430)
T 3hyw_A 287 KNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVND 331 (430)
T ss_dssp TTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999998765443 225889999999999999999854
No 7
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.5e-42 Score=338.05 Aligned_cols=301 Identities=21% Similarity=0.381 Sum_probs=245.5
Q ss_pred CcEEEECCchHHHHHHHhcccCCC--eEEEEcCCCcceec-chhh-hhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
++|||||||+||++||..|++.|+ +|+|||+++++.|. |.+. ....+......+... ...+....++.++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~----~~~~~~~~~i~~~~~ 77 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFR----PEKFFQDQAIELISD 77 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSS----CHHHHHHTTEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCC----CHHHHHhCCCEEEEE
Confidence 689999999999999999999998 89999999987774 3332 334333333222221 122334567888889
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhcccc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
+|+.++.+.+.+.+. ++. .+.||+||+|||+.|+.|++||.+ .++++..+..++..+...+
T Consensus 78 ~v~~id~~~~~v~~~---~g~--------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------- 139 (404)
T 3fg2_P 78 RMVSIDREGRKLLLA---SGT--------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------- 139 (404)
T ss_dssp CEEEEETTTTEEEES---SSC--------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG-------
T ss_pred EEEEEECCCCEEEEC---CCC--------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh-------
Confidence 999999998887763 565 899999999999999999999976 6778888888888877654
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHHHHHHHH
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQLS 295 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~ 295 (436)
..+++++|||+|++|+|+|..+.+.+ .+|+++++. .+++ .+++++.+.+.+.++
T Consensus 140 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~ 195 (404)
T 3fg2_P 140 ----------PDKKHVVVIGAGFIGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHS 195 (404)
T ss_dssp ----------GGCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHH
Confidence 33469999999999999999998876 899999995 4444 478999999999999
Q ss_pred hcCCEEEec-ceEEEeCC-----eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 296 KSGVRLVRG-IVKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 296 ~~gV~i~~~-~v~~i~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
+.||+++.+ .|++++.+ .|.+++|++++||.||+|+|++|+ ++++.++++.+ +| |.||+++| |+.|+|||
T Consensus 196 ~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~G-i~vd~~~~-t~~~~iya 272 (404)
T 3fg2_P 196 GAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA-AG-IIVDQQLL-TSDPHISA 272 (404)
T ss_dssp HTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EEECTTSB-CSSTTEEE
T ss_pred hCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCC-CC-EEECCCcc-cCCCCEEE
Confidence 999999999 48888653 578899999999999999999999 58889999887 56 99999999 89999999
Q ss_pred ecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhhc-----CCceee
Q 013810 369 VGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLLA-----RNWCWF 412 (436)
Q Consensus 369 ~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~-----~~~~~~ 412 (436)
+|||+..+. ..|.+....++..|..||+.||+||.... .+|||.
T Consensus 273 ~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~p~~~~ 322 (404)
T 3fg2_P 273 IGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWS 322 (404)
T ss_dssp CGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCCCCCCCCCEEEE
T ss_pred eecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCCCCCCCCCceEe
Confidence 999999765 34555556789999999999999998543 467776
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.5e-42 Score=334.76 Aligned_cols=284 Identities=25% Similarity=0.418 Sum_probs=234.0
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec-chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.||+|||||+||++||..|++.| +|+|||+++...|. +.+.....+......+.... ..+....++.++.+ +|
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~----~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYS----LDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSC----HHHHHHHTEEEECSCCE
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCC----HHHHHhCCcEEEECCEE
Confidence 58999999999999999999999 99999999876553 55554444443333322222 22233467888887 69
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (436)
+.+|++.+.+. . ++. ++.||+||||||++|+.|++|| .++++++++.+++.++.+.+
T Consensus 84 ~~id~~~~~V~-~---~g~--------~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~---------- 140 (367)
T 1xhc_A 84 KLIDRGRKVVI-T---EKG--------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESI---------- 140 (367)
T ss_dssp EEEETTTTEEE-E---SSC--------EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHH----------
T ss_pred EEEECCCCEEE-E---CCc--------EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHh----------
Confidence 99999877765 2 555 8999999999999999999999 46778888888888877654
Q ss_pred CCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCC
Q 013810 221 GISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGV 299 (436)
Q Consensus 221 ~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV 299 (436)
..+++++|||+|++|+|+|..|++++ .+|+++++. .+++ +++++.+.+.+.+++.||
T Consensus 141 -------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV 198 (367)
T 1xhc_A 141 -------ENSGEAIIIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETGV 198 (367)
T ss_dssp -------HHHSEEEEEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTE
T ss_pred -------hcCCcEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCC
Confidence 12358999999999999999999876 899999995 5667 999999999999999999
Q ss_pred EEEec-ceEEEeCCeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEecccccccc
Q 013810 300 RLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLE 377 (436)
Q Consensus 300 ~i~~~-~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~ 377 (436)
+++.+ +|++++.+.+++++|+ +++|.|++|+|++|+ ++++.++++.+ +| |.||+++| |+.|+|||+|||+....
T Consensus 199 ~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~g-i~Vd~~~~-t~~~~IyA~GD~a~~~~ 274 (367)
T 1xhc_A 199 KFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFR-TSAKDVYAIGDCAEYSG 274 (367)
T ss_dssp EEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS-SS-EECCTTSB-CSSTTEEECGGGEEBTT
T ss_pred EEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CC-EEECCCcc-cCCCCEEEeEeeeecCC
Confidence 99999 4999988889999998 999999999999999 58888898876 45 99999999 89999999999987421
Q ss_pred CCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 378 STGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 378 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
..++++..|..||+.||+||...
T Consensus 275 -----~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 275 -----IIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp -----BCCCSHHHHHHHHHHHHHHHTTC
T ss_pred -----CCccHHHHHHHHHHHHHHHhcCC
Confidence 11468999999999999999864
No 9
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4.7e-42 Score=342.92 Aligned_cols=327 Identities=22% Similarity=0.297 Sum_probs=240.2
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcccc-ccc---ccchhhcchhhhcCCCcE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEF-RSV---AEPIARIQPAISREPGSY 134 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~ 134 (436)
+++|+|||||+||++||..|++. |++|+|||+++.+.|.+. ++....+.... ..+ ...+......+....++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999987 899999999998776532 33333332211 111 000222223333446777
Q ss_pred EEE-eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHH
Q 013810 135 FFL-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (436)
Q Consensus 135 ~~~-~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~ 212 (436)
++. .+|+.++.+.+.+.+....+|. ...+.||+||||||+.|+.|++||.+ .++++..+..++..+...+.
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~- 155 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGE------RRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS- 155 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCC-
T ss_pred EEECCEEEEEECCCCEEEEeecCCCC------EEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh-
Confidence 754 6899999999998887533343 22689999999999999999999985 66777888888877765431
Q ss_pred hccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHH-HHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHH
Q 013810 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHY 289 (436)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~ 289 (436)
. ..+++++|||+|++|+|+|..+.++ + .+|+++++. .+++ .+++++.+.
T Consensus 156 ----~----------~~~~~vvViGgG~~g~e~A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~ 207 (472)
T 3iwa_A 156 ----A----------GEVSKAVIVGGGFIGLEMAVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQM 207 (472)
T ss_dssp ----T----------TSCSEEEEECCSHHHHHHHHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHH
T ss_pred ----c----------CCCCEEEEECCCHHHHHHHHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHH
Confidence 0 1235999999999999999999987 6 899999995 5677 889999999
Q ss_pred HHHHHHhcCCEEEec-ceEEEeC--Ce--EEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCC
Q 013810 290 ATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSV 363 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~-~v~~i~~--~~--v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~ 363 (436)
+.+.+++.||+++.+ +|.+++. +. +++.+|+++++|.||+|+|++|+ ++++.+|++++++|+|.||+++| |+.
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~-t~~ 286 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMR-TSD 286 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCB-CSS
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcc-cCC
Confidence 999999999999999 4888865 22 67789999999999999999999 67888899999999999999999 899
Q ss_pred CCEEEeccccccccC-CCCccCCccHHHHHHHHHHHHhhhhhhc------CCc--eeeecchhHHHHHHH
Q 013810 364 QDVFAVGDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLLA------RNW--CWFFDVCSLTSILNR 424 (436)
Q Consensus 364 ~~Vya~GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~~------~~~--~~~~~~~~~~~~~~~ 424 (436)
|+|||+|||+..+.. +|.+.+++++..|..||+.||+||.... .++ +.+|+..+..+|++.
T Consensus 287 ~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~~e 356 (472)
T 3iwa_A 287 PDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTV 356 (472)
T ss_dssp TTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCCCCCCCBCCCEEEECSSCEEEEEECCH
T ss_pred CCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCCCcceEEEECCceeEEEECCH
Confidence 999999999987663 4666667899999999999999998532 122 335666666666443
No 10
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8e-42 Score=334.56 Aligned_cols=293 Identities=23% Similarity=0.331 Sum_probs=236.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCe--EEEEcCCCcceec-chhh-hhhcCcccccccccchhhcchhhhcCCCcEEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~--v~lie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (436)
.++||+|||||+||++||..|++.|++ |+|||+++.+.|. +.+. ....+.. .... .+ . .....++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~--~~----~-~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKI--RL----D-CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGS--BC----C-CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhh--hH----H-HHHHCCCEEE
Confidence 357999999999999999999998884 9999999876654 2222 1222211 1111 01 1 2345688888
Q ss_pred Ee-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCC-CCCccccccccChHHHHHHHHHHHHhc
Q 013810 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI-HGVKENATFLREVHHAQEIRRKLLLNL 214 (436)
Q Consensus 137 ~~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (436)
.+ +|+.++.+.+.+.+. ++. .+.||+||||||++|+.|++ ||.+++++++.+.+++..+.+.+
T Consensus 78 ~~~~v~~i~~~~~~v~~~---~g~--------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~---- 142 (408)
T 2gqw_A 78 LGVTAQSFDPQAHTVALS---DGR--------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL---- 142 (408)
T ss_dssp ETCCEEEEETTTTEEEET---TSC--------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC----
T ss_pred cCCEEEEEECCCCEEEEC---CCC--------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh----
Confidence 87 599999988877653 565 79999999999999999999 99866677788888887765432
Q ss_pred cccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHHHHH
Q 013810 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATT 292 (436)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~ 292 (436)
..+++|+|||+|++|+|+|..|.+.+ .+|+++++. .+++ .+++++.+.+.+
T Consensus 143 -------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 195 (408)
T 2gqw_A 143 -------------RPQSRLLIVGGGVIGLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVAR 195 (408)
T ss_dssp -------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHH
T ss_pred -------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHH
Confidence 22459999999999999999999876 899999995 4666 488999999999
Q ss_pred HHHhcCCEEEec-ceEEEeCCeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEec
Q 013810 293 QLSKSGVRLVRG-IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVG 370 (436)
Q Consensus 293 ~l~~~gV~i~~~-~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~G 370 (436)
.+++.||+++.+ +|.+++++.|++.+|+++++|.||+|+|++|+ ++++.++++.+ +| |.||+++| |+.|+|||+|
T Consensus 196 ~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~-t~~~~IyA~G 272 (408)
T 2gqw_A 196 YHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD-DG-IFVDAYGR-TTCPDVYALG 272 (408)
T ss_dssp HHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBS-SS-EECCTTCB-CSSTTEEECG
T ss_pred HHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCC-CC-EEECCCCc-cCCCCEEEEE
Confidence 999999999999 48888855888999999999999999999999 68888898886 56 99999999 8999999999
Q ss_pred cccccccC-CCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 371 DCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 371 D~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
||+..+.. .|.+.++.++..|..||+.||+||....
T Consensus 273 D~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 273 DVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp GGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred EEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 99997542 3444445688999999999999998543
No 11
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.6e-41 Score=348.10 Aligned_cols=327 Identities=21% Similarity=0.295 Sum_probs=260.6
Q ss_pred CCCCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecc-hhhhhhcCcccccccccchhhcchhhhcCCCcEEE
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTP-LLASTCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (436)
+++++|||||||+|||+||..|++. |++|+|||+++.+.|.+ .++....+...... ..+......+....++.++
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~--~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQ--KLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGG--GGBSSCHHHHHHHTTCEEE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChH--HhhccCHHHHHHhcCcEEE
Confidence 4568999999999999999999987 89999999999887764 33333333322111 1122222333445677775
Q ss_pred E-eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCC-c-cccccccChHHHHHHHHHHHHh
Q 013810 137 L-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-K-ENATFLREVHHAQEIRRKLLLN 213 (436)
Q Consensus 137 ~-~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~-~-~~~~~~~~~~~~~~~~~~~~~~ 213 (436)
. .+|+.++.+.+.+.+....++. ...+.||+||||||++|+.|++||. + ..+++..+..++..+...+..
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~- 184 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVTTNE------TYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE- 184 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH-
T ss_pred ECCEEEEEECCCCEEEEeecCCCC------EEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh-
Confidence 4 6999999999998887544443 2268899999999999999999998 4 567888888888877766521
Q ss_pred ccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHH
Q 013810 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATT 292 (436)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~ 292 (436)
..+++++|||+|++|+|+|..|++++ .+|+++++. .+++.+++++.+.+.+
T Consensus 185 --------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~ 236 (588)
T 3ics_A 185 --------------KKPRHATVIGGGFIGVEMVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYVHE 236 (588)
T ss_dssp --------------HCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred --------------cCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHHHH
Confidence 23459999999999999999999876 899999994 5788899999999999
Q ss_pred HHHhcCCEEEecc-eEEEeC--CeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 293 QLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 293 ~l~~~gV~i~~~~-v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
.+++.||+++.+. |.+++. +.|.+.+|+++++|.||+|+|++|+ ++++.+|++++++|+|.||+++| |+.|+|||
T Consensus 237 ~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~-t~~~~IyA 315 (588)
T 3ics_A 237 HMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQ-TSDPHIYA 315 (588)
T ss_dssp HHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSB-CSSTTEEE
T ss_pred HHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccc-cCCCCEEE
Confidence 9999999999984 998876 6799999999999999999999999 58888999999999999999999 89999999
Q ss_pred eccccccccC-CCCccCCccHHHHHHHHHHHHhhhhh-hc------CCc--eeeecchhHHHHHHH
Q 013810 369 VGDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFL-LA------RNW--CWFFDVCSLTSILNR 424 (436)
Q Consensus 369 ~GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~-~~------~~~--~~~~~~~~~~~~~~~ 424 (436)
+|||+..+.. +|.+..++++..|..||+.||+||.. .. .+. +.+++..+..+|++.
T Consensus 316 ~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~a~vGlte 381 (588)
T 3ics_A 316 IGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNE 381 (588)
T ss_dssp CGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCSSCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred eeeeeecccccCCcccccccHHHHHHHHHHHHHHhcCCCccccCCcccceEEEECCeEEEEecCCH
Confidence 9999986653 46655678999999999999999987 22 122 235677776666544
No 12
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.8e-41 Score=346.40 Aligned_cols=324 Identities=22% Similarity=0.322 Sum_probs=254.4
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecc-hhhhhhcCcccccccccchhhcchhhhcCCCcEEE-Ee
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTP-LLASTCVGTLEFRSVAEPIARIQPAISREPGSYFF-LS 138 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 138 (436)
++|+|||||+||++||..|++. +++|+|||+++.+.|.+ .++....+..... ...+.+....+....++.++ ..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 79 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQR--SALVLQTPESFKARFNVEVRVKH 79 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCG--GGGBCCCHHHHHHHHCCEEETTE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCCh--HHhhccCHHHHHHhcCcEEEECC
Confidence 6899999999999999999987 88999999999887764 2333333322111 11112222223334577775 46
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhcccc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
+|+.++.+.+.+.+....++. ..++.||+||||||++|+.|++||.+ .++++..+..++..+.+.+..
T Consensus 80 ~V~~id~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~----- 148 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLLDGS------EYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM----- 148 (565)
T ss_dssp EEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH-----
T ss_pred EEEEEECCCCEEEEEecCCCC------eEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh-----
Confidence 999999999999887543343 12689999999999999999999985 667888888888777765421
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHh
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~ 296 (436)
..+++|+|||+|++|+|+|..|++.+ .+|+++++. .+++.+++++.+.+.+.+++
T Consensus 149 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 204 (565)
T 3ntd_A 149 ----------NNVEHATVVGGGFIGLEMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQAIRD 204 (565)
T ss_dssp ----------TTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHH
T ss_pred ----------CCCCEEEEECCCHHHHHHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHHHHH
Confidence 23459999999999999999999876 899999995 57788899999999999999
Q ss_pred cCCEEEecc-eEEEeC---------------------C--eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCc
Q 013810 297 SGVRLVRGI-VKDVDS---------------------Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGR 351 (436)
Q Consensus 297 ~gV~i~~~~-v~~i~~---------------------~--~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~ 351 (436)
.||+++.+. +.+++. + .+++.+|+++++|.||+|+|++|+ ++++.+|++++++|+
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~ 284 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGG 284 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSS
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCC
Confidence 999999984 887764 2 366788999999999999999999 678888999999999
Q ss_pred EEeCCCCCCCCCCCEEEecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhhcCC--------ceeeecchhHHHHH
Q 013810 352 IGIDEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLLARN--------WCWFFDVCSLTSIL 422 (436)
Q Consensus 352 i~vd~~~~~t~~~~Vya~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~--------~~~~~~~~~~~~~~ 422 (436)
|.||+++| |+.|+|||+|||+..+. .+|.+..+++++.|..||+.||+||...... ++.+|+..+..+|+
T Consensus 285 i~vd~~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~ 363 (565)
T 3ntd_A 285 IKVNAMMQ-TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGATGK 363 (565)
T ss_dssp BCCCTTCB-CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEEC
T ss_pred EEECCCcc-cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecC
Confidence 99999999 89999999999998765 3566656789999999999999999854321 23357776666664
Q ss_pred HH
Q 013810 423 NR 424 (436)
Q Consensus 423 ~~ 424 (436)
+.
T Consensus 364 ~e 365 (565)
T 3ntd_A 364 NE 365 (565)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 13
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.4e-41 Score=335.62 Aligned_cols=319 Identities=22% Similarity=0.268 Sum_probs=242.6
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
+++|+|||||+||++||..|++. +++|+|||+++.+.+.+. ++....+....... .......+.+..++.++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~gi~v~~~ 79 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKL---MYYPPEVFIKKRGIDLHLN 79 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------CTHHHHTTCEEETT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHh---hhcCHHHHHHhcCcEEEec
Confidence 47999999999999999999987 889999999987766542 22222222122111 1111122334567888877
Q ss_pred -EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccc
Q 013810 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
+|+.++.....+.+ .++. .++.||+||||||+.|+.|++||.+ .++++..+..++..+.+.+.
T Consensus 80 ~~v~~i~~~~~~v~~---~~g~-------~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~----- 144 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRE---NGGE-------KSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME----- 144 (449)
T ss_dssp CEEEEECSSEEEEEC---SSSE-------EEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS-----
T ss_pred CEEEEEecCCCEEEE---CCce-------EEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH-----
Confidence 89999877655532 2331 2789999999999999999999986 56777888888877776531
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCc-ccHHHHHHHHHHH
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l 294 (436)
...+++++|||+|++|+|+|..|++.+ .+|+++++. .+++. +++++.+.+.+.+
T Consensus 145 ----------~~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 200 (449)
T 3kd9_A 145 ----------KYKVENVVIIGGGYIGIEMAEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKL 200 (449)
T ss_dssp ----------SSCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHH
Confidence 013459999999999999999999876 899999995 56776 8999999999999
Q ss_pred HhcCCEEEecc-eEEEeCCe---EEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEe
Q 013810 295 SKSGVRLVRGI-VKDVDSQK---LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAV 369 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~~~~---v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~ 369 (436)
++. |+++.+. +.+++.+. ..+.+++++++|.|++|+|++|+ ++++.+|++++++|+|.||+++| |+.|+|||+
T Consensus 201 ~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~ 278 (449)
T 3kd9_A 201 KKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQ-TSVENVYAA 278 (449)
T ss_dssp TTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCB-CSSTTEEEC
T ss_pred HhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCc-cCCCCEEEe
Confidence 999 9999985 88887542 34667889999999999999999 68888999999999999999999 899999999
Q ss_pred ccccccccC-CCCccCCccHHHHHHHHHHHHhhhhhhc--------CCceeeecchhHHHHHHH
Q 013810 370 GDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLLA--------RNWCWFFDVCSLTSILNR 424 (436)
Q Consensus 370 GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~~--------~~~~~~~~~~~~~~~~~~ 424 (436)
|||+..++. +|.+.+++++..|..||+.||+||.... .+++.+++..+..+|++.
T Consensus 279 GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~~e 342 (449)
T 3kd9_A 279 GDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKELHFPGVLGTAVTKFMDVEIGKTGLTE 342 (449)
T ss_dssp STTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEECCH
T ss_pred eeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCCccCCCcccceEEEEcCcEEEEecCCH
Confidence 999987653 5666668899999999999999998532 224456777777666443
No 14
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1e-40 Score=334.37 Aligned_cols=301 Identities=22% Similarity=0.298 Sum_probs=233.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCC---CeEEEEcCCCcceecch-hhhhhcCc-ccccccccchhhcchhhhcCCCcEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSL---YDVVCVSPRNHMVFTPL-LASTCVGT-LEFRSVAEPIARIQPAISREPGSYF 135 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g---~~v~lie~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (436)
+++||+|||||+||++||..|++.| .+|+|||+++.+.|.+. +.....+. .....+.... .......++.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~gv~v 109 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSD----KEELESLGAKV 109 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCC----HHHHHHTTCEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcC----HHHHHhCCCEE
Confidence 3589999999999999999999987 99999999887665432 22122222 1122211111 11233457777
Q ss_pred EE-eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc------------cccccccChHH
Q 013810 136 FL-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK------------ENATFLREVHH 202 (436)
Q Consensus 136 ~~-~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~------------~~~~~~~~~~~ 202 (436)
+. .+|+.++.+.+.+.+....++. ++.||+||||||++|+.|++||.+ +++++..++.+
T Consensus 110 ~~~~~v~~i~~~~~~v~v~~~g~~~--------~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 110 YMESPVQSIDYDAKTVTALVDGKNH--------VETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp ETTCCEEEEETTTTEEEEEETTEEE--------EEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred EeCCEEEEEECCCCEEEEEeCCcEE--------EEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHH
Confidence 54 4689999888888765211122 789999999999999999999975 35777888888
Q ss_pred HHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-
Q 013810 203 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS- 280 (436)
Q Consensus 203 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~- 280 (436)
..++.+.+. . ..+++|+|||+|++|+|+|..|++++ .+|+++++. .+++
T Consensus 182 ~~~~~~~~~-----~----------~~~~~vvVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~ 232 (490)
T 2bc0_A 182 SADVIAKLE-----N----------KDIKRVAVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAG 232 (490)
T ss_dssp HHHHHHHTT-----S----------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTT
T ss_pred HHHHHHHhh-----h----------cCCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhh
Confidence 877765420 0 22359999999999999999999876 899999995 5666
Q ss_pred cccHHHHHHHHHHHHhcCCEEEecc-eEEEeCCe----EEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEe
Q 013810 281 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQK----LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGI 354 (436)
Q Consensus 281 ~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~~----v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~v 354 (436)
.+++++.+.+.+.+++.||+++.+. |++++.++ +.+ +|+++++|.||+|+|++|+ ++++.. ++++++|+|.|
T Consensus 233 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G~I~V 310 (490)
T 2bc0_A 233 YYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNGAFLV 310 (490)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTSCBCC
T ss_pred HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCCCEEE
Confidence 6899999999999999999999994 88887532 444 7788999999999999999 677766 88888999999
Q ss_pred CCCCCCCCCCCEEEecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 355 DEWLRVPSVQDVFAVGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 355 d~~~~~t~~~~Vya~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
|+++| |+.|+|||+|||+..+. ..+++..++++..|..||+.||+||...
T Consensus 311 d~~~~-t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 311 NKRQE-TSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGT 361 (490)
T ss_dssp CTTCB-CSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCcc-cCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 99999 89999999999998654 3455445689999999999999999854
No 15
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=5.9e-41 Score=333.06 Aligned_cols=316 Identities=18% Similarity=0.249 Sum_probs=234.2
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcc-cccccccchhhcchhhhcCCCcEEEE-
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYFFL- 137 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 137 (436)
+||+|||||+||++||.+|++. |++|+|||+++.+.|.+. +.....+.. ...++... ........++.++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYI----TEEELRRQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCC----CHHHHHHTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcC----CHHHHHHCCCEEEEC
Confidence 6999999999999999999987 899999999998776542 222222211 11221111 11122345777754
Q ss_pred eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccc
Q 013810 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
.+|+.++.+.+.+.+....++. .+.||+||||||++|..|++||.+ .++++..++.+...+.+..
T Consensus 79 ~~V~~id~~~~~v~v~~~~~~~--------~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------ 144 (452)
T 3oc4_A 79 REVVAMDVENQLIAWTRKEEQQ--------WYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL------ 144 (452)
T ss_dssp CEEEEEETTTTEEEEEETTEEE--------EEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH------
T ss_pred CEEEEEECCCCEEEEEecCceE--------EEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------
Confidence 5899999999988775222233 799999999999999999999986 5667776666655544432
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCc-ccHHHHHHHHHHH
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l 294 (436)
..+++++|||+|++|+|+|..+++++ .+|+++++. .+++. +++++.+.+.+.+
T Consensus 145 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l 199 (452)
T 3oc4_A 145 -----------ENSQTVAVIGAGPIGMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSL 199 (452)
T ss_dssp -----------HTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHH
T ss_pred -----------hcCCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHH
Confidence 23359999999999999999999876 899999995 56665 8999999999999
Q ss_pred HhcCCEEEecc-eEEEe--CCe--EEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 295 SKSGVRLVRGI-VKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~--~~~--v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
++.||+++.+. |++++ +++ |.++++ ++++|.||+|+|++|+ ++++.. ++++++|+|.||+++| |+.|+|||
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~-t~~~~IyA 276 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQTIAVDAYLQ-TSVPNVFA 276 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTSCBCCCTTCB-CSSTTEEE
T ss_pred HHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCCCEEECcCcc-CCCCCEEE
Confidence 99999999984 88887 333 556666 8999999999999999 465544 7888899999999999 89999999
Q ss_pred ecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhhcCC--------ceeeecchhHHHHHHH
Q 013810 369 VGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLLARN--------WCWFFDVCSLTSILNR 424 (436)
Q Consensus 369 ~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~--------~~~~~~~~~~~~~~~~ 424 (436)
+|||+..+. .++++.+++++..|..||+.||+||...... +...|+..+.++|++.
T Consensus 277 ~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~a~vG~te 341 (452)
T 3oc4_A 277 IGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKTHRFIGSLRTMGTKVGDYYLASTGLTE 341 (452)
T ss_dssp CGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCCCCCCCCCCCEEEEETTEEEEEEECCS
T ss_pred EEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCCccCCCccccEEEEEcCeeEEEecCCH
Confidence 999998654 3455555679999999999999999854321 2233555555555443
No 16
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2.1e-40 Score=329.18 Aligned_cols=317 Identities=19% Similarity=0.277 Sum_probs=244.1
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcc---cccccccchhhcchhhhcCCCcEEE
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL---EFRSVAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (436)
+||+|||||+||++||..|++. |.+|+|||+++.+.|.+. +.....+.. ....+.... .......++.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSS----PEELSNLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCC----HHHHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcC----HHHHHHcCCEEE
Confidence 4899999999999999999997 999999999987666532 222222221 122221111 122334578875
Q ss_pred Ee-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhc
Q 013810 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (436)
Q Consensus 137 ~~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (436)
.+ +|..++.+.+.+.+....+++ ...+.||+||||||++|+.|++||.+ .++++..++.+..++.+..
T Consensus 77 ~~~~v~~i~~~~~~v~v~~~~~g~------~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---- 146 (452)
T 2cdu_A 77 MRHQVTNVDPETKTIKVKDLITNE------EKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA---- 146 (452)
T ss_dssp ESEEEEEEEGGGTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG----
T ss_pred eCCEEEEEEcCCCEEEEEecCCCc------eEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh----
Confidence 54 689999888888876422221 11799999999999999999999986 5678888888887776643
Q ss_pred cccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHHHHH
Q 013810 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATT 292 (436)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~ 292 (436)
..+++++|||+|++|+|+|..|.+++ .+|+++++. .+++ .+++++.+.+.+
T Consensus 147 -------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 199 (452)
T 2cdu_A 147 -------------PKAKTITIIGSGYIGAELAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAK 199 (452)
T ss_dssp -------------GGCSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred -------------ccCCeEEEECcCHHHHHHHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHH
Confidence 33459999999999999999998766 899999995 5666 689999999999
Q ss_pred HHHhcCCEEEecc-eEEEeC--CeE--EEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCE
Q 013810 293 QLSKSGVRLVRGI-VKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366 (436)
Q Consensus 293 ~l~~~gV~i~~~~-v~~i~~--~~v--~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~V 366 (436)
.+++.||+++.+. |++++. +++ ...+|+++++|.||+|+|++|+ ++++.. ++++++|+|.||+++| |+.|+|
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G~i~Vd~~~~-t~~~~I 277 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNGAIITDEYMH-SSNRDI 277 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTT-SCBCTTSCBCCCTTSB-CSSTTE
T ss_pred HHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCCCEEECCCcC-cCCCCE
Confidence 9999999999994 888864 433 2347889999999999999999 577776 8888899999999999 899999
Q ss_pred EEecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhhcC--------CceeeecchhHHHHH
Q 013810 367 FAVGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLLAR--------NWCWFFDVCSLTSIL 422 (436)
Q Consensus 367 ya~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~--------~~~~~~~~~~~~~~~ 422 (436)
||+|||+..+. ..|++.+++++..|..||+.||+||..... ++..+|+..+..+|+
T Consensus 278 yA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~ 342 (452)
T 2cdu_A 278 FAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDKVKDMGTQSSSGLKLYGRTYVSTGI 342 (452)
T ss_dssp EECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEEC
T ss_pred EEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCCCcCCCccceEEEEECCeeeEeecC
Confidence 99999998654 345544578999999999999999985421 134446666655553
No 17
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.3e-40 Score=324.92 Aligned_cols=304 Identities=20% Similarity=0.266 Sum_probs=246.0
Q ss_pred CcEEEECCchHHHHHHHhccc---CCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 63 PRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
++|||||||+||+++|..|++ .|++|+|||+++.+.+.|.+.....+.....++...+.+. ....++.++.++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~gv~~~~~~ 77 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEA----LPEKGIQFQEGT 77 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHH----TGGGTCEEEECE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHH----HhhCCeEEEEee
Confidence 689999999999999999999 8999999999999888877665555555544444444333 344688999999
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCC
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 219 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (436)
|+.++.+.+.+.+. ++.. +.+++.||+||+|||+.|+.|++||.++..++..+.+++..+.+.+..
T Consensus 78 v~~i~~~~~~V~~~---~g~~----~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~------- 143 (409)
T 3h8l_A 78 VEKIDAKSSMVYYT---KPDG----SMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLES------- 143 (409)
T ss_dssp EEEEETTTTEEEEE---CTTS----CEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHH-------
T ss_pred EEEEeCCCCEEEEc---cCCc----ccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHH-------
Confidence 99999998888775 3320 012589999999999999999999987667778888888888877632
Q ss_pred CCCChhhhcccCcEEEECCCh-------------------------HHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEe
Q 013810 220 PGISEEEKSRLLHCVVVGGGP-------------------------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 274 (436)
Q Consensus 220 p~~~~~~~~~~~~vvViG~G~-------------------------~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~ 274 (436)
..++++|||+|. .++|+|..++.... + ...++..+|++++
T Consensus 144 ---------~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~----~--~g~~~~~~v~~~~ 208 (409)
T 3h8l_A 144 ---------FQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFK----K--KGMLDKVHVTVFS 208 (409)
T ss_dssp ---------CCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHH----T--TTCTTTEEEEEEC
T ss_pred ---------hcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHH----H--cCCCCCeEEEEEe
Confidence 112677999992 58899988876541 1 1112346999999
Q ss_pred CCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCCeEEEcCCcEEecceEEEecCCCCchhcccCCCC-CCCCCcE
Q 013810 275 ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP-KSPGGRI 352 (436)
Q Consensus 275 ~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~-~~~~G~i 352 (436)
+.+.++.+++.+.+.+.+.+++.||+++++. |++++.++|++++|+++++|+||+++|+.|++++..+++. .+++|+|
T Consensus 209 ~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i 288 (409)
T 3h8l_A 209 PGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFI 288 (409)
T ss_dssp SSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCB
T ss_pred CCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCE
Confidence 9777788889999999999999999999985 9999999999999999999999999999999888777332 4678999
Q ss_pred EeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 353 GIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 353 ~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
.||+++|++++|||||+|||+..+. ++++..|..||+.||+||....
T Consensus 289 ~vd~~~~~~~~~~vfa~GD~~~~~~-------~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 289 PTDLNMVSIKYDNVYAVGDANSMTV-------PKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CBBTTSBBSSCTTEEECGGGBTTCC-------SCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeCcccccCCCCCEEEeehhccCCC-------CcHHHHHHHHHHHHHHHHHHHh
Confidence 9999999559999999999998532 7899999999999999998654
No 18
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.2e-40 Score=328.48 Aligned_cols=295 Identities=24% Similarity=0.342 Sum_probs=232.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCCcceec-chhh-hhhcCcccccccccchhhcchhhhcCCCcEEEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFFL 137 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (436)
+++|+|||||+||++||..|++.|+ +|+|||+++.+.|. +.+. ....+......+.... .......++.++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~gv~~~~ 79 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRT----PDAYAAQNIQLLG 79 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSC----HHHHHHTTEEEEC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccC----HHHHHhCCCEEEe
Confidence 4799999999999999999999998 79999998876654 2222 1222222222211111 1223446788877
Q ss_pred e-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cc---cccccChHHHHHHHHHHHH
Q 013810 138 S-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-EN---ATFLREVHHAQEIRRKLLL 212 (436)
Q Consensus 138 ~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~---~~~~~~~~~~~~~~~~~~~ 212 (436)
+ +|+.++.+.+.+.+. ++. ++.||+||+|||++|+.|++||.+ .+ ++++.+.+++..+.+.+
T Consensus 80 ~~~v~~i~~~~~~v~~~---~g~--------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l-- 146 (431)
T 1q1r_A 80 GTQVTAINRDRQQVILS---DGR--------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL-- 146 (431)
T ss_dssp SCCEEEEETTTTEEEET---TSC--------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC--
T ss_pred CCEEEEEECCCCEEEEC---CCC--------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh--
Confidence 5 789999888777653 565 799999999999999999999975 34 67778888887776543
Q ss_pred hccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCc-ccHHHHHHH
Q 013810 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYA 290 (436)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~ 290 (436)
..+++|+|||+|++|+|+|..|.+.+ .+|+++++. .+++. +++++.+.+
T Consensus 147 ---------------~~~~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~l 197 (431)
T 1q1r_A 147 ---------------IADNRLVVIGGGYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAFY 197 (431)
T ss_dssp ---------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHH
T ss_pred ---------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHHH
Confidence 23459999999999999999999876 899999995 45554 889999999
Q ss_pred HHHHHhcCCEEEec-ceEEEeC----C---eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCC
Q 013810 291 TTQLSKSGVRLVRG-IVKDVDS----Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVP 361 (436)
Q Consensus 291 ~~~l~~~gV~i~~~-~v~~i~~----~---~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t 361 (436)
.+.+++.||+++.+ .|.+++. + .|.+.+|+++++|.||+|+|++|+ ++++.++++.+ +| |.||+++| |
T Consensus 198 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~-~g-i~Vd~~~~-t 274 (431)
T 1q1r_A 198 EHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD-NG-IVINEHMQ-T 274 (431)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS-SS-EECCTTSB-C
T ss_pred HHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC-CC-EEECCCcc-c
Confidence 99999999999999 4888864 2 477889999999999999999999 68888999886 45 99999999 8
Q ss_pred CCCCEEEeccccccccC-CCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 362 SVQDVFAVGDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 362 ~~~~Vya~GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
+.|+|||+|||+..+.. .|.+.+..++..|..||+.||.||...
T Consensus 275 s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 319 (431)
T 1q1r_A 275 SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGK 319 (431)
T ss_dssp SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCC
Confidence 99999999999987542 344334557899999999999999853
No 19
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=4.5e-40 Score=328.92 Aligned_cols=322 Identities=20% Similarity=0.310 Sum_probs=247.8
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcc-cccccccchhhcchhhhcCCCcEEEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYFFL 137 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (436)
++||+|||||+||++||..|++. |.+|+|||+++...|.+. ++....+.. ....+ .......+.+..++.++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~gv~~~~ 112 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKL---IARNVKTFRDKYGIDAKV 112 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGG---BSSCHHHHHHTTCCEEES
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHh---hhcCHHHHHhhcCCEEEe
Confidence 36999999999999999999985 899999999987765432 332222211 12111 111222233445788876
Q ss_pred -eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhcc
Q 013810 138 -SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLM 215 (436)
Q Consensus 138 -~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (436)
.+|+.++.+.+.+.+....+|+ ..++.||+||||||+.|+.|++||.+ .++++..+.+++.++.+.+..
T Consensus 113 ~~~v~~i~~~~~~v~v~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~--- 183 (480)
T 3cgb_A 113 RHEVTKVDTEKKIVYAEHTKTKD------VFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET--- 183 (480)
T ss_dssp SEEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS---
T ss_pred CCEEEEEECCCCEEEEEEcCCCc------eEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh---
Confidence 5889999988888876422342 12589999999999999999999986 567778888888887765420
Q ss_pred ccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHH
Q 013810 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQL 294 (436)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l 294 (436)
..+++|+|||+|++|+|+|..|.+.+ .+|+++++. .+++.+++++.+.+.+.+
T Consensus 184 ------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l 237 (480)
T 3cgb_A 184 ------------NKVEDVTIIGGGAIGLEMAETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEA 237 (480)
T ss_dssp ------------SCCCEEEEECCHHHHHHHHHHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHH
T ss_pred ------------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHH
Confidence 13459999999999999999999876 899999995 577788999999999999
Q ss_pred HhcCCEEEecc-eEEEeCC-eE--EEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEe
Q 013810 295 SKSGVRLVRGI-VKDVDSQ-KL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAV 369 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~~~-~v--~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~ 369 (436)
++.||+++.+. |.+++.+ ++ ...++.++++|.||+|+|++|+ ++++.++++++++|+|.||+++| |+.|+|||+
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~-ts~p~IyA~ 316 (480)
T 3cgb_A 238 DKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQ-TNVQDVYAA 316 (480)
T ss_dssp HHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSB-CSSTTEEEC
T ss_pred HHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCcc-CCCCCEEEe
Confidence 99999999984 8888653 22 2335568999999999999998 68888999999899999999999 899999999
Q ss_pred ccccccccC-CCCccCCccHHHHHHHHHHHHhhhhhhc--------CCceeeecchhHHHHH
Q 013810 370 GDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLLA--------RNWCWFFDVCSLTSIL 422 (436)
Q Consensus 370 GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~~--------~~~~~~~~~~~~~~~~ 422 (436)
|||+..+.. .|++.++.++..|..||+.||+||.... .+++.+++..+..+++
T Consensus 317 GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG~ 378 (480)
T 3cgb_A 317 GDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKRRAFKGTLGTGIIKFMNLTLARTGL 378 (480)
T ss_dssp GGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCCCCCCCBCCCEEEEETTEEEEEEEC
T ss_pred eeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCCccCCCccceeEEEECCcEEEEeCC
Confidence 999986552 4555556789999999999999997532 2345556666655553
No 20
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=3e-40 Score=326.59 Aligned_cols=308 Identities=19% Similarity=0.214 Sum_probs=239.4
Q ss_pred CCcEEEECCchHHHHHHHhccc---CCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
+++|||||||+||++||..|++ .|++|+|||+++++.|.|.+.....+.....++...+.+ +....++.++.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----~~~~~gv~~~~~ 79 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRH----YVERKGIHFIAQ 79 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHH----HHHTTTCEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHH----HHHHCCCEEEEe
Confidence 4799999999999999999999 899999999999999988877776665555444444333 344578999989
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhcc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLM 215 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 215 (436)
+|+.++.+.+.+.+. ++. ++.||+||+|||++++.+.+||.++ +.+.+++.+++..+.+.+...
T Consensus 80 ~v~~id~~~~~V~~~---~g~--------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~-- 146 (437)
T 3sx6_A 80 SAEQIDAEAQNITLA---DGN--------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQAL-- 146 (437)
T ss_dssp CEEEEETTTTEEEET---TSC--------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHH--
T ss_pred EEEEEEcCCCEEEEC---CCC--------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHH--
Confidence 999999998877653 555 7999999999999999999999863 566788888888887765321
Q ss_pred ccCCCCCChhhhcccCcEEEECCChHH------HHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCC-----Cccc
Q 013810 216 LSDVPGISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEIL-----SSFD 283 (436)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvViG~G~~g------~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~l-----~~~~ 283 (436)
...++++|||+|+++ +|+|..++....+ . ..+...+ |+++++.+.+ +.+
T Consensus 147 ------------~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~----~--g~~~~~~~Vtlv~~~~~~~~~~l~~~- 207 (437)
T 3sx6_A 147 ------------LREPGPIVIGAMAGASCFGPAYEYAMIVASDLKK----R--GMRDKIPSFTFITSEPYIGHLGIQGV- 207 (437)
T ss_dssp ------------HHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH----T--TCGGGCSCEEEEESSSSTTCTTTTCC-
T ss_pred ------------HhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH----c--CCcccCcEEEEEcCCccccccccCcc-
Confidence 011257889986654 9999888765421 1 1112234 9999996532 233
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEeCCeEEEcC---------CcEEecceEEEecCCCCchh-cccCCCCCCCCCcE
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---------GTEVPYGLLVWSTGVGPSTL-VKSLDLPKSPGGRI 352 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~~v~~~~---------g~~i~~D~vi~a~G~~p~~~-~~~~~l~~~~~G~i 352 (436)
++..+.+.+.+++.||+++.+. |++++++.+.+++ ++++++|++++++|+.++.+ ....++ .+++|+|
T Consensus 208 ~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G~i 286 (437)
T 3sx6_A 208 GDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGGFV 286 (437)
T ss_dssp TTHHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTSCB
T ss_pred hHHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCCcE
Confidence 3477888999999999999995 9999998887764 66899999999999998854 434566 6888999
Q ss_pred EeCCCCCCCCCCCEEEeccccccccCCCCc---cCCccHHHHHHHHHHHHhhhhhhc
Q 013810 353 GIDEWLRVPSVQDVFAVGDCSGYLESTGKT---VLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 353 ~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~---~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
.||+++|++++|||||+|||+..+...+.+ ..|+++..|+.||+.||+||....
T Consensus 287 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l 343 (437)
T 3sx6_A 287 LVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADL 343 (437)
T ss_dssp CBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 999999955999999999999976543322 247899999999999999997543
No 21
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=1e-39 Score=323.81 Aligned_cols=317 Identities=23% Similarity=0.285 Sum_probs=240.7
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceecch-hhhhhcCcc-cccccccchhhcchhhhcCCCcEEEE-
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYFFL- 137 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 137 (436)
+||||||||+||++||..|++. |.+|+|||+++.+.|.+. +.....+.. ....+.... .......++.++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMT----GEKMESRGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCC----HHHHHHTTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCC----HHHHHHCCCEEEEC
Confidence 4899999999999999999987 899999999987766542 222222221 122221111 1122335788754
Q ss_pred eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccc
Q 013810 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
.+|+.++.+.+.+.+....+|+ ..++.||+||||||+.|+.|++||.+ +++++.++.+++..+.+.+.
T Consensus 77 ~~v~~i~~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~----- 145 (447)
T 1nhp_A 77 TEITAIQPKEHQVTVKDLVSGE------ERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV----- 145 (447)
T ss_dssp EEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHT-----
T ss_pred CEEEEEeCCCCEEEEEecCCCc------eEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhh-----
Confidence 5888999988888876433343 11489999999999999999999986 56777888888877766541
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-cccHHHHHHHHHHH
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATTQL 294 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l 294 (436)
. ..+++++|||+|++|+|+|..|++.+ .+|+++++. .+++ .+++++.+.+.+.+
T Consensus 146 ~----------~~~~~vvIiG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 201 (447)
T 1nhp_A 146 D----------PEVNNVVVIGSGYIGIEAAEAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEM 201 (447)
T ss_dssp C----------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHH
T ss_pred h----------cCCCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHH
Confidence 0 13359999999999999999999876 899999995 4566 58899999999999
Q ss_pred HhcCCEEEecc-eEEEeCC-e---EEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 295 SKSGVRLVRGI-VKDVDSQ-K---LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~~~-~---v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
++.||+++.+. |.+++.+ . +.+ +++++++|.||+|+|++|+ ++++.. ++++++|+|.||+++| |+.|+|||
T Consensus 202 ~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G~i~Vd~~~~-t~~~~Iya 278 (447)
T 1nhp_A 202 EANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNGLIKTDEYMR-TSEPDVFA 278 (447)
T ss_dssp HTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCB-CSSTTEEE
T ss_pred HhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCCcEEECcccc-CCCCCEEE
Confidence 99999999984 8888753 2 444 6678999999999999999 677776 8888889999999999 89999999
Q ss_pred ecccccccc-CCCCccCCccHHHHHHHHHHHHhhhhhhc--------CCceeeecchhHHHH
Q 013810 369 VGDCSGYLE-STGKTVLPALAQVSYEQLHLFQKPSFLLA--------RNWCWFFDVCSLTSI 421 (436)
Q Consensus 369 ~GD~~~~~~-~~~~~~~~~~~~~A~~~g~~aa~~i~~~~--------~~~~~~~~~~~~~~~ 421 (436)
+|||+..+. ..|++..++++..|..||+.||+||.... .+++.+++..+..++
T Consensus 279 ~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~~~~~~~~~~~~~~~~~~~~~~vG 340 (447)
T 1nhp_A 279 VGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTG 340 (447)
T ss_dssp CGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCCCCCCCBCCCEEEEETTEEEEEEE
T ss_pred eeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCCCCCCCccccEEEEECCeeeEEec
Confidence 999998644 23444456789999999999999998532 123335555555454
No 22
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=5.1e-39 Score=312.59 Aligned_cols=290 Identities=19% Similarity=0.308 Sum_probs=228.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCcceec-chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
++||+|||||+||++||..|++.| .+|+|||+++...|. +.+.....+......+. ......+....++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~ 80 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLA---MAEPGAMAEQLNARILTH 80 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHE---EECHHHHHHHTTCEEECS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhh---ccCHHHHHHhCCcEEEeC
Confidence 479999999999999999999988 469999998765543 44433332221111111 111122334567888754
Q ss_pred -EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccc
Q 013810 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 139 -~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
+|+.++...+.+.+ ++. .+.||+||+|||+.|+.|++||.+ +++++..++.++..+...+
T Consensus 81 ~~v~~i~~~~~~v~~----~~~--------~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------ 142 (384)
T 2v3a_A 81 TRVTGIDPGHQRIWI----GEE--------EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA------ 142 (384)
T ss_dssp CCCCEEEGGGTEEEE----TTE--------EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH------
T ss_pred CEEEEEECCCCEEEE----CCc--------EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh------
Confidence 78899987777765 233 789999999999999999999976 5788889998888777664
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCc-ccHHHHHHHHHHH
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~-~~~~~~~~~~~~l 294 (436)
..+++++|||+|++|+|+|..|.+.+ .+|+++++. .+++. +++++.+.+.+.+
T Consensus 143 -----------~~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l 197 (384)
T 2v3a_A 143 -----------AGKRRVLLLGAGLIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAGL 197 (384)
T ss_dssp -----------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHH
T ss_pred -----------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHHH
Confidence 22459999999999999999999876 899999995 45555 4888999999999
Q ss_pred HhcCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEE
Q 013810 295 SKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFA 368 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya 368 (436)
++.||+++.+. |.+++. + .+++.+|+++++|.||+|+|.+|+ ++++.++++.+ +| |.||+++| |+.|+|||
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~-~g-i~vd~~~~-t~~~~IyA 274 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN-RG-IVVDRSLR-TSHANIYA 274 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBS-SS-EEECTTCB-CSSTTEEE
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCC-CC-EEECCCCC-CCCCCEEE
Confidence 99999999994 888864 2 467789999999999999999999 58888999887 57 99999999 99999999
Q ss_pred eccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 369 VGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 369 ~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
+|||+..+. . ....+..|..||+.+|+||...
T Consensus 275 ~GD~~~~~~---~--~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 275 LGDCAEVDG---L--NLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp CGGGEEETT---B--CCCSHHHHHHHHHHHHHHHTTC
T ss_pred eeeeeeECC---C--CcchHHHHHHHHHHHHHHhcCC
Confidence 999997421 0 1346778999999999999853
No 23
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.9e-39 Score=324.95 Aligned_cols=314 Identities=17% Similarity=0.256 Sum_probs=233.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcceec-chhhhhh-cCccc-------c------c-cc-ccchh
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFT-PLLASTC-VGTLE-------F------R-SV-AEPIA 121 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~~~~-~~~~~~~-~~~~~-------~------~-~~-~~~~~ 121 (436)
.+++|||||||+||++||..|++. +.+|+|||+++++.|. |.+...+ .+... + . .+ ..+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 457999999999999999999876 8899999999877664 2222211 11100 0 0 00 00000
Q ss_pred hcc--hhhh--cCCCcEEEEe-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCC-----c
Q 013810 122 RIQ--PAIS--REPGSYFFLS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-----K 191 (436)
Q Consensus 122 ~~~--~~~~--~~~~~~~~~~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~-----~ 191 (436)
.+. ..+. ...++.++.+ +|+.+|.+.+.+.+. +|. ++.||+||||||++|+.|++++. .
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~---~g~--------~i~yd~lviATGs~p~~~~~~~~~~~~~~ 158 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLN---DGS--------QITYEKCLIATGGTPRSLSAIDRAGAEVK 158 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEET---TSC--------EEEEEEEEECCCEEECCCHHHHTSCHHHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEEC---CCC--------EEECCEEEECCCCCCCCCCCccccccccc
Confidence 000 0011 2357888886 899999888877653 565 79999999999999988776653 1
Q ss_pred cccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEE
Q 013810 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (436)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~ 271 (436)
+.++.+++.+++..+...+ ..+++|+|||+|++|+|+|..|++.+.. .+.+|+
T Consensus 159 ~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~ 211 (493)
T 1m6i_A 159 SRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEVI 211 (493)
T ss_dssp HTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEE
T ss_pred CceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEE
Confidence 3566678888888777654 2345999999999999999999875410 137899
Q ss_pred EEeCCC-CC-CcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecCCCCc-hhcccCC
Q 013810 272 LIEANE-IL-SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLD 343 (436)
Q Consensus 272 lv~~~~-~l-~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~ 343 (436)
++++.+ .+ +.+++++.+.+.+.+++.||+++.+. |++++. + .|++.+|++++||.||+|+|.+|+ .+++.++
T Consensus 212 ~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 212 QLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp EECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHT
T ss_pred EEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcC
Confidence 998853 33 45778899999999999999999994 888853 2 467889999999999999999999 5888889
Q ss_pred CCCCC-CCcEEeCCCCCCCCCCCEEEeccccccccC-CCCccCCccHHHHHHHHHHHHhhhhhh-----cCCceeeecc
Q 013810 344 LPKSP-GGRIGIDEWLRVPSVQDVFAVGDCSGYLES-TGKTVLPALAQVSYEQLHLFQKPSFLL-----ARNWCWFFDV 415 (436)
Q Consensus 344 l~~~~-~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~-~~~~~~~~~~~~A~~~g~~aa~~i~~~-----~~~~~~~~~~ 415 (436)
+++++ +|+|.||+++| | .|+|||+|||+..+.. .|.. ...++..|+.||+.||+||... ..+|||...+
T Consensus 292 l~~~~~~ggi~Vd~~l~-t-~~~IyA~GD~a~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~~~~~~~~~~~s~~~ 367 (493)
T 1m6i_A 292 LEIDSDFGGFRVNAELQ-A-RSNIWVAGDAACFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLG 367 (493)
T ss_dssp CCBCTTTCSEECCTTCE-E-ETTEEECGGGEEEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCCCCCCCCCEEEEESS
T ss_pred CccccCCCcEEECCCcc-c-CCCeeEeeeeEeccCcccCcc-ccchHHHHHHHHHHHHHHhcCCCCCcCCcCceeeeec
Confidence 98886 58899999999 6 6999999999987543 2332 3557889999999999999753 3457776544
No 24
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=3e-39 Score=316.26 Aligned_cols=298 Identities=16% Similarity=0.202 Sum_probs=233.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
.+||||||||+||++||.+|++.+ .+|+|||+++++.+.|.+.....+.....++..++..+. ..+++++.++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-----~~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-----AHGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-----HTTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-----HCCCEEEEeE
Confidence 378999999999999999998755 689999999999999998888887777666655554432 3589999999
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc-----ccccccChHHHHHHHHHHHHhc
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE-----NATFLREVHHAQEIRRKLLLNL 214 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~~~~~~~~ 214 (436)
|+.||++.+.+.+. +|. ++.||+||||||++++.+++||.++ .++..+..+++..+++.+...
T Consensus 77 v~~id~~~~~v~~~---~g~--------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~- 144 (401)
T 3vrd_B 77 ALGIDPDKKLVKTA---GGA--------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM- 144 (401)
T ss_dssp EEEEETTTTEEEET---TSC--------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS-
T ss_pred EEEEEccCcEEEec---ccc--------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc-
Confidence 99999999988764 666 8999999999999999999999753 335567788888888776321
Q ss_pred cccCCCCCChhhhcccCcEEEECC-------ChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---CcccH
Q 013810 215 MLSDVPGISEEEKSRLLHCVVVGG-------GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSFDD 284 (436)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~vvViG~-------G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~~~~ 284 (436)
.. ...+|+++ +..+.|++.+++.+.+ +. ....+|++++..+.+ +.+++
T Consensus 145 -------------~~-~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~----~~----~~~~~v~i~~~~~~~~~~~~~~~ 202 (401)
T 3vrd_B 145 -------------DD-GGVVIIAPPAPPFRCPPGPYERASQIAHYLK----AH----KSKSKVIILDNSQTFSKQAQFTK 202 (401)
T ss_dssp -------------CT-TCEEEEECCSSSCBCTTHHHHHHHHHHHHHH----HH----CTTCEEEEECSSSSCTTHHHHHH
T ss_pred -------------cc-CCcEEEecCCccEEeehHHHHHHHHHHHHHH----hc----CCCCEEEEEcccccccccccccH
Confidence 11 13444443 3456677777665431 11 234799999986533 34556
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC----CeEEEcCCcEEecceEEEecCCCCchhcccCCCCCCCCCcEEeCCC-C
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS----QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEW-L 358 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~----~~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~-~ 358 (436)
.+.+.+.+.+++.||+++.+. +..++. ..+++++|+++++|++++++|++|+++++..++ .+++|+|.||++ +
T Consensus 203 ~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl-~~~~G~i~VD~~tl 281 (401)
T 3vrd_B 203 GWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASL-TNDSGWCPVDIRTF 281 (401)
T ss_dssp HHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTC-CCTTSSBCBCTTTC
T ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhccc-cccCCCEEECCCcc
Confidence 666777777888999999984 555542 468899999999999999999999988889898 478899999987 7
Q ss_pred CCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 359 ~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
|+|++|||||+|||+... +.|++++.|.+||+.+|+||...
T Consensus 282 ~~t~~p~VfAiGDva~~~------~~pk~a~~A~~qa~v~A~ni~~~ 322 (401)
T 3vrd_B 282 ESSLQPGIHVIGDACNAA------PMPKSAYSANSQAKVAAAAVVAL 322 (401)
T ss_dssp BBSSSTTEEECGGGBCCT------TSCBSHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCEEEecccccCC------CCCchHHHHHHHHHHHHHHHHHH
Confidence 889999999999998642 13789999999999999999754
No 25
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=1.5e-38 Score=313.88 Aligned_cols=306 Identities=21% Similarity=0.277 Sum_probs=234.2
Q ss_pred CcEEEECCchHHHHHHHhccc--CCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDT--SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (436)
++|||||||+||++||..|++ .|++|+|||+++.+.|.|.+.....+.....++...+... ....++.++.++|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~gv~~~~~~v 78 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL----LPKFNIEFINEKA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT----GGGGTEEEECSCE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHH----HHhcCCEEEEEEE
Confidence 689999999999999999999 8899999999999999887777666655555444444333 3446899998999
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (436)
+.++.+.+.+.+. ++. ++.||+||+|||+.+..|.+.. ......+++.+++.++.+.+...
T Consensus 79 ~~id~~~~~v~~~---~g~--------~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~------- 139 (430)
T 3h28_A 79 ESIDPDANTVTTQ---SGK--------KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQEL------- 139 (430)
T ss_dssp EEEETTTTEEEET---TCC--------EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHH-------
T ss_pred EEEECCCCEEEEC---CCc--------EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHH-------
Confidence 9999988877653 554 7999999999999977653211 13445677788887777654211
Q ss_pred CCChhhhcccCcEEEECCChHH------HHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-----CcccHHHHHH
Q 013810 221 GISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-----SSFDDRLRHY 289 (436)
Q Consensus 221 ~~~~~~~~~~~~vvViG~G~~g------~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-----~~~~~~~~~~ 289 (436)
...++++|||+|+++ +|+|..+++... +. ..+...+|+++++.+.+ +.+ ++..+.
T Consensus 140 -------~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~----~~--g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~~ 205 (430)
T 3h28_A 140 -------YANPGPVVIGAIPGVSCFGPAYEFALMLHYELK----KR--GIRYKVPMTFITSEPYLGHFGVGGI-GASKRL 205 (430)
T ss_dssp -------HHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHH----HT--TCGGGCCEEEECSSSSTTCTTTTCS-TTHHHH
T ss_pred -------HhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHH----Hc--CCccceEEEEecCCccccccccCcc-hHHHHH
Confidence 111257888987654 999988876441 11 11233689999986532 222 357788
Q ss_pred HHHHHHhcCCEEEecc-eEEEeCCeEEEcC----CcEEecceEEEecCCCCchhccc--CCCCCCCCC-cEEeCCCCCCC
Q 013810 290 ATTQLSKSGVRLVRGI-VKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKS--LDLPKSPGG-RIGIDEWLRVP 361 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~-v~~i~~~~v~~~~----g~~i~~D~vi~a~G~~p~~~~~~--~~l~~~~~G-~i~vd~~~~~t 361 (436)
+.+.+++.||+++.+. |++++.+.+.+++ ++++++|.+++++|++|++++.. .++ .+++| +|.||+++|++
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G~~i~Vd~~l~t~ 284 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPANKMVIVNRCFQNP 284 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTTCCBCCCTTSBCS
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCCCEEecCccccCC
Confidence 8899999999999985 9999999888887 78899999999999999876665 467 67889 99999999955
Q ss_pred CCCCEEEeccccccccCCCCc---cCCccHHHHHHHHHHHHhhhhhhc
Q 013810 362 SVQDVFAVGDCSGYLESTGKT---VLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 362 ~~~~Vya~GD~~~~~~~~~~~---~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
++|||||+|||+..+...+.+ ..|+++..|+.||+.||+||....
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l 332 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999976543332 147899999999999999997643
No 26
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=7e-39 Score=320.99 Aligned_cols=285 Identities=22% Similarity=0.319 Sum_probs=213.9
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcC--------CCcceecchh----hh-----------h-----hcCc--
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPLL----AS-----------T-----CVGT-- 110 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~--------~~~~~~~~~~----~~-----------~-----~~~~-- 110 (436)
++||+|||||+||++||..|++ .|++|+|||+ +..++..... +. . ..+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 9999999992 3332221000 00 0 0000
Q ss_pred ------ccccccccchhhc-------chhhhcCC-CcEEEEeEeEeEeCCCCEEEEEEecC-----CcccCCCCceeeec
Q 013810 111 ------LEFRSVAEPIARI-------QPAISREP-GSYFFLSHCAGIDTDNHVVHCETVTD-----ELRTLEPWKFKISY 171 (436)
Q Consensus 111 ------~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~v~~id~~~~~v~~~~~~~-----g~~~~~~~~~~~~~ 171 (436)
.++..+....... ........ ++.++.+++..++. +.+.+....+ +. .+.|
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~~~~~~--------~~~~ 156 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETADPKSAVKE--------RLQA 156 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSSTTSCEEE--------EEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCCccCCCCe--------EEEc
Confidence 0000000000000 01112334 89999998888764 5666642112 33 7999
Q ss_pred cEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHH
Q 013810 172 DKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSD 251 (436)
Q Consensus 172 d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~ 251 (436)
|+||||||++|+.|++||. +.+++. .++. .+...| ++++|||+|.+|+|+|..|++
T Consensus 157 d~lViATGs~p~~p~i~G~-~~~~~~---~~~~----------~~~~~~----------~~vvViGgG~ig~E~A~~l~~ 212 (495)
T 2wpf_A 157 DHILLATGSWPQMPAIPGI-EHCISS---NEAF----------YLPEPP----------RRVLTVGGGFISVEFAGIFNA 212 (495)
T ss_dssp EEEEECCCEEECCCCCTTG-GGCEEH---HHHT----------TCSSCC----------SEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCcCCCCCCCc-cccccH---HHHH----------hhhhcC----------CeEEEECCCHHHHHHHHHHHh
Confidence 9999999999999999987 333322 2111 122223 499999999999999999998
Q ss_pred H---HHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-----eEEEcCCcE
Q 013810 252 F---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTE 321 (436)
Q Consensus 252 ~---~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-----~v~~~~g~~ 321 (436)
+ + .+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|++.+|++
T Consensus 213 ~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~ 278 (495)
T 2wpf_A 213 YKPPG--------------GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKT 278 (495)
T ss_dssp HCCTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCE
T ss_pred hCCCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcE
Confidence 7 5 899999995 67888999999999999999999999994 8888642 477789989
Q ss_pred EecceEEEecCCCCc-h-h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHH
Q 013810 322 VPYGLLVWSTGVGPS-T-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLF 398 (436)
Q Consensus 322 i~~D~vi~a~G~~p~-~-~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~a 398 (436)
+++|.||+|+|++|+ + + ++.++++++++|+|.||+++| |+.|+|||+|||++. ++++..|..||+.|
T Consensus 279 i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~~~~---------~~l~~~A~~~g~~a 348 (495)
T 2wpf_A 279 LDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSR-TNVPNIYAIGDITDR---------LMLTPVAINEGAAL 348 (495)
T ss_dssp EEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCB-CSSTTEEECGGGGCS---------CCCHHHHHHHHHHH
T ss_pred EEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCc-cCCCCEEEEeccCCC---------ccCHHHHHHHHHHH
Confidence 999999999999999 4 4 678899999899999999999 899999999999975 67899999999999
Q ss_pred Hhhhhh
Q 013810 399 QKPSFL 404 (436)
Q Consensus 399 a~~i~~ 404 (436)
|.||..
T Consensus 349 a~~i~g 354 (495)
T 2wpf_A 349 VDTVFG 354 (495)
T ss_dssp HHHHHS
T ss_pred HHHhcC
Confidence 999985
No 27
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.5e-39 Score=328.19 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=227.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh----h-h-------------------cCccc----
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS----T-C-------------------VGTLE---- 112 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~----~-~-------------------~~~~~---- 112 (436)
.++||+|||||+||++||.+|++.|++|+|||+++.++......+ . . .....
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 458999999999999999999999999999999874432211000 0 0 00000
Q ss_pred ccccccchhhcch---hhh-----cCCCcEEE-EeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCC
Q 013810 113 FRSVAEPIARIQP---AIS-----REPGSYFF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS 183 (436)
Q Consensus 113 ~~~~~~~~~~~~~---~~~-----~~~~~~~~-~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~ 183 (436)
...+...+..... .+. ...++.++ .+++..++. +.+.+ ++. .+.||+||||||+.|.
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~----~g~--------~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEA----AGK--------VFKAKNLILAVGAGPG 187 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEE----TTE--------EEEBSCEEECCCEECC
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEE----CCE--------EEEeCEEEECCCCCCC
Confidence 0001111111111 222 55678887 778888875 45544 243 7999999999999999
Q ss_pred CCCCCCCcc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhc
Q 013810 184 TFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 262 (436)
Q Consensus 184 ~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~ 262 (436)
.|++||.+. ++++. .++. .. +...| +++++|||+|.+|+|+|..+.+++
T Consensus 188 ~p~i~G~~~~~v~~~---~~~~---~~------l~~~~---------g~~vvViGgG~~g~E~A~~l~~~G--------- 237 (523)
T 1mo9_A 188 TLDVPGVNAKGVFDH---ATLV---EE------LDYEP---------GSTVVVVGGSKTAVEYGCFFNATG--------- 237 (523)
T ss_dssp CCCSTTTTSBTEEEH---HHHH---HH------CCSCC---------CSEEEEECCSHHHHHHHHHHHHTT---------
T ss_pred CCCCCCcccCcEeeH---HHHH---HH------HHhcC---------CCeEEEECCCHHHHHHHHHHHHcC---------
Confidence 999999753 24432 2221 11 22223 149999999999999999999876
Q ss_pred CCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce------EEEcCCc-EEecceEEEec
Q 013810 263 HVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK------LILNDGT-EVPYGLLVWST 331 (436)
Q Consensus 263 ~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~------v~~~~g~-~i~~D~vi~a~ 331 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++. ++ |++.+|+ ++++|.||+|+
T Consensus 238 -----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~ 312 (523)
T 1mo9_A 238 -----RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGL 312 (523)
T ss_dssp -----CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECC
T ss_pred -----CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECc
Confidence 899999995 57788899999999999999999999994 888864 33 5667887 89999999999
Q ss_pred CCCCc-h-hcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc---
Q 013810 332 GVGPS-T-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA--- 406 (436)
Q Consensus 332 G~~p~-~-~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~--- 406 (436)
|++|+ . +++.+|++++++|+|.||+++| |+.|+|||+|||++. ++++..|..||+.||.||....
T Consensus 313 G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~ 382 (523)
T 1mo9_A 313 GEQPRSAELAKILGLDLGPKGEVLVNEYLQ-TSVPNVYAVGDLIGG---------PMEMFKARKSGCYAARNVMGEKISY 382 (523)
T ss_dssp CCEECCHHHHHHHTCCBCTTSCBCCCTTSB-CSSTTEEECGGGGCS---------SCSHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCccCCccCHHHcCCccCCCCCEEECCCCc-cCCCCEEEEeecCCC---------cccHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999 4 7888999999899999999999 899999999999986 6789999999999999998532
Q ss_pred ----CCceeeecchhHHHHHH
Q 013810 407 ----RNWCWFFDVCSLTSILN 423 (436)
Q Consensus 407 ----~~~~~~~~~~~~~~~~~ 423 (436)
.+++++++..+..+|++
T Consensus 383 ~~~~~p~~~~~~~~~a~vG~~ 403 (523)
T 1mo9_A 383 TPKNYPDFLHTHYEVSFLGMG 403 (523)
T ss_dssp CCCSCCEEEESSSEEEEEECC
T ss_pred CCCCCCeEEECCCceEEEeCC
Confidence 35667777766666543
No 28
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.1e-39 Score=302.87 Aligned_cols=282 Identities=17% Similarity=0.206 Sum_probs=209.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEeE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCA 141 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 141 (436)
++||+|||||+||++||..|++.|++|+|||+++.....+.......+.. ..........+...+....++.++.++|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~v~ 80 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQD-GKAPGEIIAEARRQIERYPTIHWVEGRVT 80 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCT-TCCHHHHHHHHHHHHTTCTTEEEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCC-CCCHHHHHHHHHHHHHhcCCeEEEEeEEE
Confidence 37999999999999999999999999999998754322111110011100 01111111222222333347888888999
Q ss_pred eEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhccccC
Q 013810 142 GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLMLSD 218 (436)
Q Consensus 142 ~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (436)
.++.+.+.+.+.. .++. ++.||+||+|||+.|+.|++||.+. .........+...
T Consensus 81 ~i~~~~~~~~v~~-~~g~--------~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------- 138 (297)
T 3fbs_A 81 DAKGSFGEFIVEI-DGGR--------RETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYE------------- 138 (297)
T ss_dssp EEEEETTEEEEEE-TTSC--------EEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGG-------------
T ss_pred EEEEcCCeEEEEE-CCCC--------EEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchh-------------
Confidence 9998776665543 3554 7999999999999999999999753 1111111111100
Q ss_pred CCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcC
Q 013810 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (436)
Q Consensus 219 ~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~g 298 (436)
..+++|+|||+|++|+|+|..|.+. + +|+++++.+. .+. +.+.+.+++.|
T Consensus 139 ---------~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~--~~~----~~~~~~l~~~g 188 (297)
T 3fbs_A 139 ---------LDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIV--EPD----ADQHALLAARG 188 (297)
T ss_dssp ---------GTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTC--CCC----HHHHHHHHHTT
T ss_pred ---------hcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCC--CCC----HHHHHHHHHCC
Confidence 2235999999999999999998752 3 8999998643 222 34566888899
Q ss_pred CEEEecceEEEeCC-eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCC--CCC-cEEeCCCCCCCCCCCEEEecccc
Q 013810 299 VRLVRGIVKDVDSQ-KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS--PGG-RIGIDEWLRVPSVQDVFAVGDCS 373 (436)
Q Consensus 299 V~i~~~~v~~i~~~-~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~--~~G-~i~vd~~~~~t~~~~Vya~GD~~ 373 (436)
|+++...|.+++.+ .|++.+|+++++|.|++++|++|+ ++++.++++.+ ++| ++.||++++ |+.|+|||+|||+
T Consensus 189 v~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~-t~~~~vya~GD~~ 267 (297)
T 3fbs_A 189 VRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQ-TTARGIFACGDVA 267 (297)
T ss_dssp CEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCB-CSSTTEEECSGGG
T ss_pred cEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCc-cCCCCEEEEeecC
Confidence 99997569999887 899999999999999999999998 68888888876 457 899999999 9999999999999
Q ss_pred ccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 374 GYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 374 ~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
.. ++.+..|+.||+.||.+|....
T Consensus 268 ~~---------~~~~~~A~~~g~~aa~~i~~~l 291 (297)
T 3fbs_A 268 RP---------AGSVALAVGDGAMAGAAAHRSI 291 (297)
T ss_dssp CT---------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred Cc---------hHHHHHHHHhHHHHHHHHHHHH
Confidence 86 7899999999999999998654
No 29
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5e-39 Score=302.78 Aligned_cols=287 Identities=10% Similarity=0.090 Sum_probs=197.8
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec-chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
|+++||+|||||||||+||++|++.|++|+|||++...... ...++... .+.............+..+...+.+...
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFIT--RDGIKPEEFKEIGLNEVMKYPSVHYYEK 81 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTT--CTTBCHHHHHHHHHHHHTTSTTEEEEEC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccC--CCCCCHHHHHHHHHHHHHhcCCEEEEee
Confidence 45689999999999999999999999999999987431110 00001100 0000000111112223344456777777
Q ss_pred EeEeEeCC-CCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhcccc
Q 013810 139 HCAGIDTD-NHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 139 ~v~~id~~-~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
.+..++.. ...+.+. ..++. ++.||+||||||++|+.|++||.+.. ....+.........
T Consensus 82 ~~~~~~~~~~~~~~v~-~~~g~--------~~~a~~liiATGs~p~~p~i~G~~~~--~~~~v~~~~~~~~~-------- 142 (304)
T 4fk1_A 82 TVVMITKQSTGLFEIV-TKDHT--------KYLAERVLLATGMQEEFPSIPNVREY--YGKSLFSCPYCDGW-------- 142 (304)
T ss_dssp CEEEEEECTTSCEEEE-ETTCC--------EEEEEEEEECCCCEEECCSCTTHHHH--BTTTEESCHHHHSG--------
T ss_pred EEEEeeecCCCcEEEE-ECCCC--------EEEeCEEEEccCCccccccccCcccc--ccceeeeccccchh--------
Confidence 77766543 3333333 23565 89999999999999999999997521 11111111111100
Q ss_pred CCCCCChhhhcccCcEEEECCChH-HHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHh
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPT-GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~-g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~ 296 (436)
..+.++++|||+|.. ++|+|..+..++ .+|+++.+++.+. +.+.+.|++
T Consensus 143 ---------~~~~~~~~VIggG~~~~~e~a~~~~~~~--------------~~v~i~~~~~~~~-------~~~~~~l~~ 192 (304)
T 4fk1_A 143 ---------ELKDQPLIIISENEDHTLHMTKLVYNWS--------------TDLVIATNGNELS-------QTIMDELSN 192 (304)
T ss_dssp ---------GGTTSCEEEECCSHHHHHHHHHHHTTTC--------------SCEEEECSSCCCC-------HHHHHHHHT
T ss_pred ---------HhcCCceeeecCCCchhhhHHHHHHhCC--------------ceEEEEeccccch-------hhhhhhhhc
Confidence 022347888888865 567777776554 8899998864332 335567888
Q ss_pred cCCEEEecceEEEeC-----CeEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEec
Q 013810 297 SGVRLVRGIVKDVDS-----QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVG 370 (436)
Q Consensus 297 ~gV~i~~~~v~~i~~-----~~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~G 370 (436)
.|++++.+.+..+.. ..|++++|+++++|.+++++|.+|+ +++.+++++++++|+|.||+++| |+.|||||+|
T Consensus 193 ~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~-Ts~p~IyA~G 271 (304)
T 4fk1_A 193 KNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGR-TSEKNIYLAG 271 (304)
T ss_dssp TTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCB-CSSTTEEECS
T ss_pred cceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCc-cCCCCEEEEe
Confidence 999999888777764 3588899999999988887776555 78899999999999999999999 9999999999
Q ss_pred cccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 371 DCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 371 D~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
||++.+ ++++..|+.||+.||.+|..+.
T Consensus 272 Dv~~~~--------~~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 272 ETTTQG--------PSSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp HHHHTS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCc--------chHHHHHHHHHHHHHHHHHHHH
Confidence 999742 5678999999999999997654
No 30
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.9e-39 Score=321.95 Aligned_cols=303 Identities=18% Similarity=0.193 Sum_probs=222.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh---------------------h-hcCcc------cc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---------------------T-CVGTL------EF 113 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~---------------------~-~~~~~------~~ 113 (436)
++||+|||||+||++||..|++.|++|+|||+++.++......+ . ..|.. +.
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNL 85 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccCH
Confidence 47999999999999999999999999999999875432210000 0 00110 00
Q ss_pred ccccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecC-CcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 114 RSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 114 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~-g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..+.. .+...........++.++.+++..++. +.+.+.. .+ +. .++.||+||+|||++|..|
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~-~~gg~-------~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 86 DKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGK--NQVTATK-ADGGT-------QVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEET--TEEEEEC-TTSCE-------EEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEe-cCCCc-------EEEEeCEEEECCCCCCCCC
Confidence 00000 000001222345688998888777764 4455443 23 21 1799999999999999999
Q ss_pred CCCCCcc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 013810 186 GIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (436)
Q Consensus 186 ~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~ 264 (436)
+++|.+. .+++ ..++.. +...| ++++|||+|++|+|+|..|++++
T Consensus 156 ~i~g~~~~~v~t---~~~~~~----------~~~~~----------~~vvViGgG~~g~E~A~~l~~~g----------- 201 (474)
T 1zmd_A 156 PGITIDEDTIVS---STGALS----------LKKVP----------EKMVVIGAGVIGVELGSVWQRLG----------- 201 (474)
T ss_dssp TTCCCCSSSEEC---HHHHTT----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCcCcEEc---HHHHhh----------ccccC----------ceEEEECCCHHHHHHHHHHHHcC-----------
Confidence 9998753 2332 222211 22223 49999999999999999999876
Q ss_pred CCccEEEEEeCC-CCCC-cccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC--e-EEE-------cCCcEEecceEEEec
Q 013810 265 KDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ--K-LIL-------NDGTEVPYGLLVWST 331 (436)
Q Consensus 265 ~~~~~V~lv~~~-~~l~-~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~--~-v~~-------~~g~~i~~D~vi~a~ 331 (436)
.+|+++++. .+++ .+++++.+.+.+.+++.||+++.+. |.+++.+ + +.+ .+++++++|.||+|+
T Consensus 202 ---~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 202 ---ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp ---CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred ---CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 899999995 5777 8999999999999999999999994 8888642 2 433 356789999999999
Q ss_pred CCCCc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc--
Q 013810 332 GVGPS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA-- 406 (436)
Q Consensus 332 G~~p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~-- 406 (436)
|++|+ ++ ++.++++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||+||....
T Consensus 279 G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~ 348 (474)
T 1zmd_A 279 GRRPFTKNLGLEELGIELDPRGRIPVNTRFQ-TKIPNIYAIGDVVAG---------PMLAHKAEDEGIICVEGMAGGAVH 348 (474)
T ss_dssp CEEECCTTSSHHHHTCCCCTTSCCCCCTTCB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCcCCCcCCchhcCCccCCCCCEEECcCCc-cCCCCEEEeeecCCC---------CccHHHHHHHHHHHHHHhcCCCCc
Confidence 99999 45 677899999899999999999 999999999999986 6789999999999999998532
Q ss_pred -----CCceeeecchhHHHH
Q 013810 407 -----RNWCWFFDVCSLTSI 421 (436)
Q Consensus 407 -----~~~~~~~~~~~~~~~ 421 (436)
.+++++++..+..+|
T Consensus 349 ~~~~~~p~~~~~~~~~a~vG 368 (474)
T 1zmd_A 349 IDYNCVPSVIYTHPEVAWVG 368 (474)
T ss_dssp CCGGGCCEEECSSSEEEEEE
T ss_pred CCCCCCCEEEECCCCeEEEe
Confidence 346666666555444
No 31
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.4e-38 Score=301.93 Aligned_cols=287 Identities=20% Similarity=0.261 Sum_probs=208.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccc-cccchhhcchhhhcCCCcEEEEeEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS-VAEPIARIQPAISREPGSYFFLSHC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v 140 (436)
++||+|||||+||++||..|++.|++|+|||++ ..............+.... ....+.+.........++.++..+|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 92 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDIV 92 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEE
Confidence 479999999999999999999999999999997 2111110000000000000 0112222222334456777777999
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhcccc
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
+.++.+.+.+.+.. .++. .+.||+||+|||+.|+.|++||.+. ..++.....+. .
T Consensus 93 ~~i~~~~~~~~v~~-~~g~--------~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~-----~-------- 150 (323)
T 3f8d_A 93 EKIENRGDEFVVKT-KRKG--------EFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADA-----P-------- 150 (323)
T ss_dssp EEEEEC--CEEEEE-SSSC--------EEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHG-----G--------
T ss_pred EEEEecCCEEEEEE-CCCC--------EEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCH-----h--------
Confidence 99998876666543 3444 8999999999999999999999753 22222211111 0
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhc
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKS 297 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~ 297 (436)
....++++|||+|++|+|+|..|.+.+ .+|+++++.+.+.. ++. .+.+.+++.
T Consensus 151 ---------~~~~~~v~vvG~G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~-~~~---~~~~~~~~~ 203 (323)
T 3f8d_A 151 ---------LFKNRVVAVIGGGDSALEGAEILSSYS--------------TKVYLIHRRDTFKA-QPI---YVETVKKKP 203 (323)
T ss_dssp ---------GGTTCEEEEECCSHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS-CHH---HHHHHHTCT
T ss_pred ---------HcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc-CHH---HHHHHHhCC
Confidence 022358999999999999999999876 89999999653332 222 233344455
Q ss_pred CCEEEecc-eEEEeCC----eEEEcC---Cc--EEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCCCE
Q 013810 298 GVRLVRGI-VKDVDSQ----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQDV 366 (436)
Q Consensus 298 gV~i~~~~-v~~i~~~----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~~V 366 (436)
||+++.+. +.+++.+ .|++.+ |+ ++++|.|++++|++|+ ++++.++++++++|+|.||++++ |+.|+|
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~-t~~~~v 282 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMR-TSVPGV 282 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCB-CSSTTE
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCce-ecCCCE
Confidence 99999995 8888764 477765 76 7999999999999999 78999999999999999999999 899999
Q ss_pred EEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 367 FAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 367 ya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
||+|||+..+ ..++.+..|+.||+.||.+|....
T Consensus 283 ya~GD~~~~~------~~~~~~~~A~~~g~~aa~~i~~~l 316 (323)
T 3f8d_A 283 FAAGDCTSAW------LGFRQVITAVAQGAVAATSAYRYV 316 (323)
T ss_dssp EECSTTBSTT------TTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcceecCCC------CcccceeehhhHHHHHHHHHHHHH
Confidence 9999999852 126899999999999999998754
No 32
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=7e-39 Score=322.84 Aligned_cols=309 Identities=17% Similarity=0.206 Sum_probs=220.4
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC--------cceecchhhh---------------h-----hcCc-
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN--------HMVFTPLLAS---------------T-----CVGT- 110 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~--------~~~~~~~~~~---------------~-----~~~~- 110 (436)
+.++||+||||||||++||..|++.|++|+|||+++ .++......+ . ..|.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 346899999999999999999999999999999854 2211100000 0 0000
Q ss_pred ------ccccccccchhh-------cchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEe
Q 013810 111 ------LEFRSVAEPIAR-------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIA 177 (436)
Q Consensus 111 ------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViA 177 (436)
.++..+...... ......+..++.++.+.+..++.. .+.+.. .+|+ ++++.||+||||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~--~v~v~~-~~g~------~~~i~~d~lViA 180 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPH--RIKATN-NKGK------EKIYSAERFLIA 180 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEEC-TTCC------CCEEEEEEEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEEc-CCCC------EEEEECCEEEEE
Confidence 001000000010 011123346888998888888765 444432 2332 127899999999
Q ss_pred CCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHH
Q 013810 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (436)
Q Consensus 178 tG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~ 257 (436)
||++|+.|++||.+..+++. .++ +.+...|+ +++|||+|++|+|+|..|++++
T Consensus 181 TGs~p~~p~i~G~~~~~~t~---~~~----------~~l~~~~~----------~vvVIGgG~ig~E~A~~l~~~G---- 233 (519)
T 3qfa_A 181 TGERPRYLGIPGDKEYCISS---DDL----------FSLPYCPG----------KTLVVGASYVALECAGFLAGIG---- 233 (519)
T ss_dssp CCEEECCCCCTTHHHHCBCH---HHH----------TTCSSCCC----------SEEEECCSHHHHHHHHHHHHTT----
T ss_pred CCCCcCCCCCCCccCceEcH---HHH----------hhhhhcCC----------eEEEECCcHHHHHHHHHHHHcC----
Confidence 99999999999965433322 111 12233343 8999999999999999999877
Q ss_pred HhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEE---eC---CeEEE----cCCc---EEe
Q 013810 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDV---DS---QKLIL----NDGT---EVP 323 (436)
Q Consensus 258 ~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i---~~---~~v~~----~~g~---~i~ 323 (436)
.+|++++++.+++.+++++.+.+.+.|++.||+++.+. +.++ ++ +.+.+ .+|. +++
T Consensus 234 ----------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~ 303 (519)
T 3qfa_A 234 ----------LDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 303 (519)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEE
T ss_pred ----------CeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEE
Confidence 89999999888899999999999999999999999983 4444 32 23322 3552 578
Q ss_pred cceEEEecCCCCc-hh--cccCCCCCC-CCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHH
Q 013810 324 YGLLVWSTGVGPS-TL--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQ 399 (436)
Q Consensus 324 ~D~vi~a~G~~p~-~~--~~~~~l~~~-~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa 399 (436)
+|.|++|+|++|+ ++ ++..+++++ ++|+|.||+++| |+.|+|||+|||+.. .++++..|..||+.||
T Consensus 304 ~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~-Ts~~~IyA~GD~~~g--------~~~~~~~A~~~g~~aa 374 (519)
T 3qfa_A 304 YNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQ-TNVPYIYAIGDILED--------KVELTPVAIQAGRLLA 374 (519)
T ss_dssp ESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSB-CSSTTEEECGGGBSS--------SCCCHHHHHHHHHHHH
T ss_pred CCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCc-cCCCCEEEEEeccCC--------CCccHHHHHHHHHHHH
Confidence 9999999999999 44 678889988 689999999999 899999999999942 1789999999999999
Q ss_pred hhhhhhc--------CCceeeecchhHHHHHH
Q 013810 400 KPSFLLA--------RNWCWFFDVCSLTSILN 423 (436)
Q Consensus 400 ~~i~~~~--------~~~~~~~~~~~~~~~~~ 423 (436)
+||+... .+++.+++..+..++++
T Consensus 375 ~~i~g~~~~~~~~~~~p~~~~~~p~~a~vGlt 406 (519)
T 3qfa_A 375 QRLYAGSTVKCDYENVPTTVFTPLEYGACGLS 406 (519)
T ss_dssp HHHHSCCCCCCCCTTCCEEECSSSCEEEEECC
T ss_pred HHHcCCCCccCCCCcCcEEEECCCceEEecCC
Confidence 9998432 34566666666555533
No 33
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-38 Score=314.93 Aligned_cols=286 Identities=18% Similarity=0.253 Sum_probs=213.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch----hh-----------hhhc-----Cc----------
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------STCV-----GT---------- 110 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~----~~-----------~~~~-----~~---------- 110 (436)
.++||+|||||+||++||..|++.|++|+|||++. ++.... .+ .... +.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 35799999999999999999999999999999974 211100 00 0000 00
Q ss_pred --cccccccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCC
Q 013810 111 --LEFRSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE 181 (436)
Q Consensus 111 --~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~ 181 (436)
.++..+.. .+...........++.++.+++..++.. .+.+.. .+|. ..++.||+||||||+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~--~~~v~~-~~g~------~~~~~~d~lviAtGs~ 159 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDG--NVEVQK-RDNT------TEVYSANHILVATGGK 159 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTS--CEEEEE-SSSC------CEEEEEEEEEECCCEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC--EEEEEe-CCCc------EEEEEeCEEEEcCCCC
Confidence 00000000 0000011122346889988888777644 344432 2332 1268999999999999
Q ss_pred CCCC-CCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhh
Q 013810 182 ASTF-GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (436)
Q Consensus 182 ~~~~-~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~ 260 (436)
|..| ++||.+ .+++ ..+... +...| ++++|||+|++|+|+|..|++++
T Consensus 160 p~~p~~i~g~~-~~~~---~~~~~~----------l~~~~----------~~vvViGgG~ig~E~A~~l~~~g------- 208 (479)
T 2hqm_A 160 AIFPENIPGFE-LGTD---SDGFFR----------LEEQP----------KKVVVVGAGYIGIELAGVFHGLG------- 208 (479)
T ss_dssp ECCCTTSTTGG-GSBC---HHHHHH----------CSSCC----------SEEEEECSSHHHHHHHHHHHHTT-------
T ss_pred CCCCCCCCCcc-cccc---hHHHhc----------ccccC----------CeEEEECCCHHHHHHHHHHHHcC-------
Confidence 9999 899873 2222 222211 12223 49999999999999999999876
Q ss_pred hcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC------eEEEcCC-cEEecceEEEec
Q 013810 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ------KLILNDG-TEVPYGLLVWST 331 (436)
Q Consensus 261 ~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~------~v~~~~g-~~i~~D~vi~a~ 331 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|.+++| +++++|.||+|+
T Consensus 209 -------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~ 281 (479)
T 2hqm_A 209 -------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTI 281 (479)
T ss_dssp -------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECS
T ss_pred -------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECC
Confidence 899999995 57888999999999999999999999994 8888642 4677888 789999999999
Q ss_pred CCCCch-h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 332 GVGPST-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 332 G~~p~~-~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
|++|+. + ++..|++++++|+|.||+++| |+.|+|||+|||++. +.++..|.+||+.||+||..
T Consensus 282 G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 282 GRKSHLGMGSENVGIKLNSHDQIIADEYQN-TNVPNIYSLGDVVGK---------VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CEEECCCSSGGGGTCCBCTTSCBCCCTTCB-CSSTTEEECGGGTTS---------SCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCccccChhhcCceECCCCCEeECCCCc-cCCCCEEEEEecCCC---------cccHHHHHHHHHHHHHHhcC
Confidence 999994 6 688899999999999999999 999999999999875 67899999999999999985
No 34
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.7e-38 Score=315.52 Aligned_cols=308 Identities=20% Similarity=0.264 Sum_probs=222.3
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcC--------CCcceecchhhhh---------------h-----cCc--
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPLLAST---------------C-----VGT-- 110 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~--------~~~~~~~~~~~~~---------------~-----~~~-- 110 (436)
++||+|||||+||++||.+|++ .|++|+|||+ +..++......+. . .+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 4799999999999999999999 9999999992 3333221100000 0 000
Q ss_pred ------cccccccc-------chhhcchhhhcCC-CcEEEEeEeEeEeCCCCEEEEEEe--cCCcccCCCCceeeeccEE
Q 013810 111 ------LEFRSVAE-------PIARIQPAISREP-GSYFFLSHCAGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKL 174 (436)
Q Consensus 111 ------~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~v~~id~~~~~v~~~~~--~~g~~~~~~~~~~~~~d~l 174 (436)
.++..+.. .+........... ++.++.++++.++. +.+.+... .++.. ...+.||+|
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~g~~-----~~~~~~d~l 155 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN--HTVLVRESADPNSAV-----LETLDTEYI 155 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET--TEEEEESSSSTTSCE-----EEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC--CEEEEEeeccCCCCc-----eEEEEcCEE
Confidence 00000000 0000111122345 89999998888875 45655421 13300 017999999
Q ss_pred EEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHH
Q 013810 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIM 254 (436)
Q Consensus 175 ViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~ 254 (436)
|||||++|..|++||. +.++ +..++. .+...| ++++|||+|++|+|+|..|.++.
T Consensus 156 viAtGs~p~~p~i~g~-~~~~---~~~~~~----------~~~~~~----------~~vvViGgG~ig~E~A~~l~~~~- 210 (490)
T 1fec_A 156 LLATGSWPQHLGIEGD-DLCI---TSNEAF----------YLDEAP----------KRALCVGGGYISIEFAGIFNAYK- 210 (490)
T ss_dssp EECCCEEECCCCSBTG-GGCB---CHHHHT----------TCSSCC----------SEEEEECSSHHHHHHHHHHHHHS-
T ss_pred EEeCCCCCCCCCCCCc-ccee---cHHHHh----------hhhhcC----------CeEEEECCCHHHHHHHHHHHhhc-
Confidence 9999999999999987 3322 222211 122223 49999999999999999999871
Q ss_pred HHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-----eEEEcCCcEEecceE
Q 013810 255 RDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLL 327 (436)
Q Consensus 255 ~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-----~v~~~~g~~i~~D~v 327 (436)
.++.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|++.+|+++++|.|
T Consensus 211 ----------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~v 280 (490)
T 1fec_A 211 ----------ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVV 280 (490)
T ss_dssp ----------CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred ----------cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEE
Confidence 012899999995 57888999999999999999999999994 8888642 467788989999999
Q ss_pred EEecCCCCc-h-h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 328 VWSTGVGPS-T-L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 328 i~a~G~~p~-~-~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
|+|+|++|+ + + ++.+|++++++|+|.||+++| |+.|+|||+|||++. ++++..|.+||+.||.||..
T Consensus 281 v~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~-t~~~~IyA~GD~~~~---------~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 281 MLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSK-TNVDNIYAIGDVTDR---------VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp EECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCB-CSSTTEEECGGGGCS---------CCCHHHHHHHHHHHHHHHHS
T ss_pred EEccCCCcCccccCchhcCccCCCCCCEEECCCCc-cCCCCEEEEeccCCC---------ccCHHHHHHHHHHHHHHhcC
Confidence 999999999 4 4 688899999899999999999 899999999999975 67999999999999999985
Q ss_pred hc--------CCceeeecchhHHHH
Q 013810 405 LA--------RNWCWFFDVCSLTSI 421 (436)
Q Consensus 405 ~~--------~~~~~~~~~~~~~~~ 421 (436)
.. .+++.+++..+..++
T Consensus 351 ~~~~~~~~~~~p~~~~~~~~~a~vG 375 (490)
T 1fec_A 351 NKPRATDHTKVACAVFSIPPMGVCG 375 (490)
T ss_dssp SCCCCCCCSSCCEEECCSSCEEEEE
T ss_pred CCCCcCCCCCccEEEECCCCeEEEe
Confidence 32 234445555555444
No 35
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.1e-39 Score=321.90 Aligned_cols=306 Identities=20% Similarity=0.241 Sum_probs=226.5
Q ss_pred CCcEEEECCchHHHHHHHhcccC---CCeEEEEcCCCcceecchh----hh---------------h-hcCcc-------
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFTPLL----AS---------------T-CVGTL------- 111 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~---g~~v~lie~~~~~~~~~~~----~~---------------~-~~~~~------- 111 (436)
++||+|||||+||++||.+|++. |++|+|||+++ ++..... +. . ..+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999998 99999999986 3221000 00 0 00110
Q ss_pred -ccccccc-------chhhcchhhhcCCCcEEEEeEeEeEeCC----CCEEEEEEecCCcccCCCCceeeeccEEEEeCC
Q 013810 112 -EFRSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTD----NHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179 (436)
Q Consensus 112 -~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~----~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG 179 (436)
+...+.. .+......+....++.++.+++..++.. .+.+.+.. .+++ +..+.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~-~~g~------~~~~~~d~lviATG 153 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATA-ADGS------TSEHEADVVLVATG 153 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEEC-TTSC------EEEEEESEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEe-CCCc------EEEEEeCEEEEcCC
Confidence 0000000 0111112233456899998888878762 24555542 2332 12689999999999
Q ss_pred CCCCCCCCCCCcc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHH
Q 013810 180 AEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR 258 (436)
Q Consensus 180 ~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~ 258 (436)
+.|..|++||.+. .+++..+..+ +...| ++++|||+|++|+|+|..+.+++
T Consensus 154 s~p~~p~i~g~~~~~v~~~~~~~~-------------~~~~~----------~~vvViGgG~ig~E~A~~l~~~g----- 205 (499)
T 1xdi_A 154 ASPRILPSAQPDGERILTWRQLYD-------------LDALP----------DHLIVVGSGVTGAEFVDAYTELG----- 205 (499)
T ss_dssp EEECCCGGGCCCSSSEEEGGGGGG-------------CSSCC----------SSEEEESCSHHHHHHHHHHHHTT-----
T ss_pred CCCCCCCCCCCCcCcEEehhHhhh-------------hhccC----------CeEEEECCCHHHHHHHHHHHHcC-----
Confidence 9999999998753 3444333211 12222 49999999999999999999876
Q ss_pred hhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEcCCcEEecceEEEecC
Q 013810 259 QRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTG 332 (436)
Q Consensus 259 ~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~g~~i~~D~vi~a~G 332 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .+++.+|+++++|.||+|+|
T Consensus 206 ---------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 206 ---------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIG 276 (499)
T ss_dssp ---------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCC
T ss_pred ---------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCC
Confidence 899999995 67788999999999999999999999994 8888643 24557888999999999999
Q ss_pred CCCc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh----
Q 013810 333 VGPS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL---- 405 (436)
Q Consensus 333 ~~p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~---- 405 (436)
++|+ ++ ++.+|++++++|+|.||+++| |+.|+|||+|||+.. ++++..|..||+.||+||...
T Consensus 277 ~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~-t~~~~IyA~GD~~~~---------~~l~~~A~~~g~~aa~~i~g~~~~~ 346 (499)
T 1xdi_A 277 SVPNTSGLGLERVGIQLGRGNYLTVDRVSR-TLATGIYAAGDCTGL---------LPLASVAAMQGRIAMYHALGEGVSP 346 (499)
T ss_dssp EEECCSSSCTTTTTCCCBTTTBCCCCSSSB-CSSTTEEECSGGGTS---------CSCHHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCcCCCcCCchhcCceECCCCCEEECCCcc-cCCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHhcCCCCcc
Confidence 9999 46 678899999889999999999 899999999999986 678999999999999999864
Q ss_pred ----cCCceeeecchhHHHHH
Q 013810 406 ----ARNWCWFFDVCSLTSIL 422 (436)
Q Consensus 406 ----~~~~~~~~~~~~~~~~~ 422 (436)
..+++++++..+..+|+
T Consensus 347 ~~~~~~p~~~~~~~~~a~vG~ 367 (499)
T 1xdi_A 347 IRLRTVAATVFTRPEIAAVGV 367 (499)
T ss_dssp CCGGGCEEEECSSSEEEEEES
T ss_pred CCCCCCcEEEEecCCceEeCC
Confidence 13466666666655553
No 36
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=2.5e-38 Score=313.72 Aligned_cols=280 Identities=20% Similarity=0.285 Sum_probs=212.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh----h-----------hhhc------Cc------cccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A-----------STCV------GT------LEFR 114 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~----~-----------~~~~------~~------~~~~ 114 (436)
++||+|||||+||++||..|++.|++|+|||++.. +..... + .... +. .++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL-GGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCC-CCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 47999999999999999999999999999999742 211000 0 0000 00 0000
Q ss_pred cccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCC
Q 013810 115 SVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (436)
Q Consensus 115 ~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i 187 (436)
.+.. .+...........++.++.+++..++. +.+.+ ++. ++.||+||||||+.|..|++
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~----~g~--------~~~~d~lviAtGs~p~~p~i 148 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV----NGE--------TITADHILIATGGRPSHPDI 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE----TTE--------EEEEEEEEECCCEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE----CCE--------EEEeCEEEECCCCCCCCCCC
Confidence 0000 000000111234678999888877774 45544 444 79999999999999999999
Q ss_pred CCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013810 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (436)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~ 267 (436)
||. +.++ +..+... +...| ++++|||+|++|+|+|..|++++
T Consensus 149 ~g~-~~~~---~~~~~~~----------~~~~~----------~~vvViGgG~~g~e~A~~l~~~g-------------- 190 (450)
T 1ges_A 149 PGV-EYGI---DSDGFFA----------LPALP----------ERVAVVGAGYIGVELGGVINGLG-------------- 190 (450)
T ss_dssp TTG-GGSB---CHHHHHH----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCc-ccee---cHHHhhh----------hhhcC----------CeEEEECCCHHHHHHHHHHHhcC--------------
Confidence 987 3322 2222221 12223 49999999999999999999876
Q ss_pred cEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-----eEEEcCCcEEecceEEEecCCCCc-h-h
Q 013810 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-T-L 338 (436)
Q Consensus 268 ~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-----~v~~~~g~~i~~D~vi~a~G~~p~-~-~ 338 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|++.+|+++++|.||+|+|++|+ + +
T Consensus 191 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l 270 (450)
T 1ges_A 191 AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNI 270 (450)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTS
T ss_pred CEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCC
Confidence 899999995 57788999999999999999999999994 8888642 477789989999999999999999 4 3
Q ss_pred -cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 339 -VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 339 -~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
++.+|++++++|+|.||+++| |+.|+|||+|||++. +.++..|.+||+.||.||..
T Consensus 271 ~~~~~gl~~~~~g~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 271 NLEAAGVKTNEKGYIVVDKYQN-TNIEGIYAVGDNTGA---------VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CHHHHTCCBCTTSCBCCCTTSB-CSSTTEEECSGGGTS---------CCCHHHHHHHHHHHHHHHHT
T ss_pred CchhcCceECCCCCEeECCCCc-cCCCCEEEEeccCCC---------CccHHHHHHHHHHHHHHHcC
Confidence 577899999999999999999 999999999999975 67899999999999999975
No 37
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.4e-38 Score=318.40 Aligned_cols=303 Identities=21% Similarity=0.243 Sum_probs=223.2
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhh---------------hhh-----cCc------ccc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA---------------STC-----VGT------LEF 113 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~---------------~~~-----~~~------~~~ 113 (436)
+.++||+|||||+||++||..|++.|++|+|||++.. +...... ... .+. .++
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~-GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHKL-GGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-CCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 3458999999999999999999999999999997642 1110000 000 000 000
Q ss_pred cccc-------cchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC-
Q 013810 114 RSVA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF- 185 (436)
Q Consensus 114 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~- 185 (436)
..+. ..+...........++.++.+++..++.....+.. ++. ++.||+||||||+.|+.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~----~g~--------~~~~d~lviAtG~~p~~p~ 164 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV----SGK--------KYTAPHILIATGGMPSTPH 164 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEE----TTE--------EEECSCEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEE----CCE--------EEEeeEEEEccCCCCCCCC
Confidence 0000 01111111223346788988888777766555542 454 799999999999999999
Q ss_pred --CCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcC
Q 013810 186 --GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (436)
Q Consensus 186 --~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~ 263 (436)
++||.+ ..+ +..+. +.+...| ++++|||+|++|+|+|..|++++
T Consensus 165 ~~~i~G~~-~~~---~~~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g---------- 210 (478)
T 3dk9_A 165 ESQIPGAS-LGI---TSDGF----------FQLEELP----------GRSVIVGAGYIAVEMAGILSALG---------- 210 (478)
T ss_dssp TTTSTTGG-GSB---CHHHH----------TTCCSCC----------SEEEEECCSHHHHHHHHHHHHTT----------
T ss_pred cCCCCCCc-eeE---chHHh----------hchhhcC----------ccEEEECCCHHHHHHHHHHHHcC----------
Confidence 899874 222 21111 1223333 49999999999999999999877
Q ss_pred CCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce----EEEcC---C----cEEecceEE
Q 013810 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK----LILND---G----TEVPYGLLV 328 (436)
Q Consensus 264 ~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~----v~~~~---g----~~i~~D~vi 328 (436)
.+|+++++. .+++.+++++.+.+.+.|++.||+++.+. +.+++. ++ +.+.+ | +++++|.|+
T Consensus 211 ----~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi 286 (478)
T 3dk9_A 211 ----SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLL 286 (478)
T ss_dssp ----CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEE
T ss_pred ----CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEE
Confidence 899999994 67899999999999999999999999984 888863 22 45554 2 579999999
Q ss_pred EecCCCCch--h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 329 WSTGVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 329 ~a~G~~p~~--~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
+|+|++|+. + ++.+|++++++|+|.||+++| |+.|+|||+|||++. +++++.|..||+.||+||+..
T Consensus 287 ~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 287 WAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN-TNVKGIYAVGDVCGK---------ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp ECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCB-CSSTTEEECGGGGCS---------SCCHHHHHHHHHHHHHHHHSC
T ss_pred EeeccccCCCCCCchhcCCeeCCCCCEeeCCCcc-cCCCCEEEEEecCCC---------CccHhHHHHHHHHHHHHHcCC
Confidence 999999993 4 778899999999999999999 899999999999975 789999999999999999854
Q ss_pred ---------cCCceeeecchhHHHHHH
Q 013810 406 ---------ARNWCWFFDVCSLTSILN 423 (436)
Q Consensus 406 ---------~~~~~~~~~~~~~~~~~~ 423 (436)
..+++.+.+..+..++++
T Consensus 357 ~~~~~~~~~~~p~~~~~~p~~a~vGlt 383 (478)
T 3dk9_A 357 KEDSKLDYNNIPTVVFSHPPIGTVGLT 383 (478)
T ss_dssp CTTCCCCCTTCCEEECCSSCEEEEECC
T ss_pred CCcccCCCCCCCeEEECCCceEEeeCC
Confidence 134555566656555543
No 38
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.1e-38 Score=314.97 Aligned_cols=304 Identities=18% Similarity=0.200 Sum_probs=220.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh---------------------hcCcc-------cc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST---------------------CVGTL-------EF 113 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~---------------------~~~~~-------~~ 113 (436)
++||+|||||+||++||..|++.|++|+|||+++.++......+. ..|.. ++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 479999999999999999999999999999998765332110000 00100 00
Q ss_pred ccccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 114 RSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 114 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..+.. .+...........++.++.+.+..++. +.+.+.. .+|. ...+.||+||+|||+.|+.|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~--~~~~v~~-~~G~------~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETA--HSIRVNG-LDGK------QEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEET--TEEEEEE-TTSC------EEEEEEEEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEEe-cCCc------eEEEEcCEEEECCCCCcCCCC
Confidence 00000 000001122334578888887777765 3454432 2441 117899999999999999999
Q ss_pred CCCCcc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013810 187 IHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (436)
Q Consensus 187 i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~ 265 (436)
++|.+. .++ +..++.. +...| ++++|||+|++|+|+|..|.+++
T Consensus 153 ~~g~~~~~v~---t~~~~~~----------~~~~~----------~~vvViGgG~~g~E~A~~l~~~g------------ 197 (468)
T 2qae_A 153 FLPFDEKVVL---SSTGALA----------LPRVP----------KTMVVIGGGVIGLELGSVWARLG------------ 197 (468)
T ss_dssp TBCCCSSSEE---CHHHHHT----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCCcCcee---chHHHhh----------cccCC----------ceEEEECCCHHHHHHHHHHHHhC------------
Confidence 988753 333 2233221 12223 49999999999999999999876
Q ss_pred CccEEEEEeCC-CCCCcccHHHHHHHHHHH-HhcCCEEEec-ceEEEeCC----eEEEc--CC--cEEecceEEEecCCC
Q 013810 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQL-SKSGVRLVRG-IVKDVDSQ----KLILN--DG--TEVPYGLLVWSTGVG 334 (436)
Q Consensus 266 ~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l-~~~gV~i~~~-~v~~i~~~----~v~~~--~g--~~i~~D~vi~a~G~~ 334 (436)
.+|+++++. .+++.+++++.+.+.+.+ ++.||+++.+ +|.+++.+ .+.+. +| +++++|.||+|+|++
T Consensus 198 --~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 198 --AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred --CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 899999995 678889999999999999 9999999998 48888642 24444 66 679999999999999
Q ss_pred Cc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccc-cccCCCCccCCccHHHHHHHHHHHHhhhhhhc----
Q 013810 335 PS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG-YLESTGKTVLPALAQVSYEQLHLFQKPSFLLA---- 406 (436)
Q Consensus 335 p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~-~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~---- 406 (436)
|+ ++ ++.++++++++|+|.||+++| |+.|+|||+|||+. . +++++.|..||+.||.||....
T Consensus 276 p~~~~l~l~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~ 345 (468)
T 2qae_A 276 PFTGGLGLDKINVAKNERGFVKIGDHFE-TSIPDVYAIGDVVDKG---------PMLAHKAEDEGVACAEILAGKPGHVN 345 (468)
T ss_dssp ECCTTSCHHHHTCCBCTTSCBCCCTTSB-CSSTTEEECGGGBSSS---------CSCHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cCCCCCCchhcCCccCCCCCEeECCCcc-cCCCCEEEeeccCCCC---------CccHhHHHHHHHHHHHHHcCCCccCC
Confidence 99 45 677899998889999999999 89999999999998 5 7889999999999999998532
Q ss_pred ---CCceeeecchhHHHH
Q 013810 407 ---RNWCWFFDVCSLTSI 421 (436)
Q Consensus 407 ---~~~~~~~~~~~~~~~ 421 (436)
.+++.+++..+.+++
T Consensus 346 ~~~~p~~~~~~~~~a~vG 363 (468)
T 2qae_A 346 YGVIPAVIYTMPEVASVG 363 (468)
T ss_dssp TTSCCEEECSSSEEEEEE
T ss_pred CCCCCEEEECCCceEEEe
Confidence 234545555444444
No 39
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.2e-38 Score=315.67 Aligned_cols=285 Identities=20% Similarity=0.282 Sum_probs=214.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhc---------------------Ccccccccccc-
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV---------------------GTLEFRSVAEP- 119 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~- 119 (436)
++||+|||||+||++||..|++.|++|+|||+++.++......+... ...++..+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 47999999999999999999999999999998776543311110000 00001000000
Q ss_pred -----hh--hcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCcee--eeccEEEEeCCCCCCCCCCCCC
Q 013810 120 -----IA--RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFK--ISYDKLVIALGAEASTFGIHGV 190 (436)
Q Consensus 120 -----~~--~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~--~~~d~lViAtG~~~~~~~i~g~ 190 (436)
+. .....+....++.++.+++..++.. .+.+.. .+|. . +.||+||||||+.|+.|++||.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~--~~~V~~-~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~ 152 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPT--HVIVKT-DEGK--------EIEAETRYMIIASGAETAKLRLPGV 152 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETT--EEEEEE-TTSC--------EEEEEEEEEEECCCEEECCCCCTTG
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCC--eEEEEc-CCCc--------EEEEecCEEEECCCCCccCCCCCCc
Confidence 11 2222344567899999999989865 344432 3454 5 9999999999999999999997
Q ss_pred ccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEE
Q 013810 191 KENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHV 270 (436)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V 270 (436)
+ .++ +..++..+.. .+... +++++|||+|++|+|+|..|++++ .+|
T Consensus 153 ~-~~~---t~~~~~~~~~------~l~~~----------~~~vvViGgG~~g~e~A~~l~~~g--------------~~V 198 (466)
T 3l8k_A 153 E-YCL---TSDDIFGYKT------SFRKL----------PQDMVIIGAGYIGLEIASIFRLMG--------------VQT 198 (466)
T ss_dssp G-GSB---CHHHHHSTTC------SCCSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------CEE
T ss_pred c-ceE---eHHHHHHHHH------HHhhC----------CCeEEEECCCHHHHHHHHHHHHcC--------------CEE
Confidence 5 322 3333321111 11222 349999999999999999999876 899
Q ss_pred EEEeCC-CCCCcc-cHHHHHHHHHHHHhcCCEEEecc-eEEEeC---Ce--EEEc--CCc--EEecceEEEecCCCCch-
Q 013810 271 TLIEAN-EILSSF-DDRLRHYATTQLSKSGVRLVRGI-VKDVDS---QK--LILN--DGT--EVPYGLLVWSTGVGPST- 337 (436)
Q Consensus 271 ~lv~~~-~~l~~~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~---~~--v~~~--~g~--~i~~D~vi~a~G~~p~~- 337 (436)
+++++. .+++.+ ++++.+.+.+.++ |+++.+. |.+++. +. +.+. +|+ ++++|.|++|+|++|+.
T Consensus 199 tlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 199 HIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp EEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 999995 577877 9999998888876 9999984 888865 33 5566 666 79999999999999994
Q ss_pred h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 338 L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 338 ~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
+ ++..+++++++| |.||+++| |+.|+|||+|||++. ++++..|..||+.||+||...
T Consensus 276 l~l~~~gl~~~~~G-i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 276 EGAREIGLSISKTG-IVVDETMK-TNIPNVFATGDANGL---------APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp TTTGGGTCCBCSSS-BCCCTTCB-CSSTTEEECGGGTCS---------CCSHHHHHHHHHHHHHHHHTT
T ss_pred cchhhcCceeCCCC-EeECCCcc-CCCCCEEEEEecCCC---------CccHhHHHHHHHHHHHHHhCC
Confidence 3 788899999999 99999999 899999999999986 789999999999999999854
No 40
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=6.7e-38 Score=311.63 Aligned_cols=281 Identities=20% Similarity=0.327 Sum_probs=212.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh----h-----------hhh-----cCc------cccc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A-----------STC-----VGT------LEFR 114 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~----~-----------~~~-----~~~------~~~~ 114 (436)
.++||+|||||+||++||..|++.|++|+|||++. ++..... + ... .+. .++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 35899999999999999999999999999999974 2211000 0 000 000 0000
Q ss_pred cccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCC
Q 013810 115 SVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (436)
Q Consensus 115 ~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i 187 (436)
.+.. .+...........++.++.+++..++. +.+.+ ++. ++.||+||||||+.|..|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~----~g~--------~~~~d~lviAtGs~p~~p~i 147 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV----EGQ--------RLSADHIVIATGGRPIVPRL 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE----TTE--------EEEEEEEEECCCEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE----CCE--------EEEcCEEEECCCCCCCCCCC
Confidence 0000 000001112234688998888777764 45554 444 79999999999999999999
Q ss_pred CCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013810 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (436)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~ 267 (436)
||. +.++ +..+... +...| ++++|||+|.+|+|+|..|++++
T Consensus 148 ~G~-~~~~---~~~~~~~----------~~~~~----------~~vvVvGgG~~g~e~A~~l~~~G-------------- 189 (463)
T 2r9z_A 148 PGA-ELGI---TSDGFFA----------LQQQP----------KRVAIIGAGYIGIELAGLLRSFG-------------- 189 (463)
T ss_dssp TTG-GGSB---CHHHHHH----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCc-ccee---cHHHHhh----------hhccC----------CEEEEECCCHHHHHHHHHHHhcC--------------
Confidence 987 3322 2222221 12223 49999999999999999999876
Q ss_pred cEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCc-EEecceEEEecCCCCc-h-h
Q 013810 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGT-EVPYGLLVWSTGVGPS-T-L 338 (436)
Q Consensus 268 ~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~-~i~~D~vi~a~G~~p~-~-~ 338 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++. + .|++.+|+ ++++|.|++|+|++|+ + +
T Consensus 190 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l 269 (463)
T 2r9z_A 190 SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDL 269 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTS
T ss_pred CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCC
Confidence 899999995 57788999999999999999999999995 888864 2 57778998 8999999999999999 3 3
Q ss_pred -cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 339 -VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 339 -~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
++.++++++++|+|.||+++| |+.|+|||+|||++. +.++..|..||+.+|.||..
T Consensus 270 ~~~~~g~~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 270 GLEAAGIEVQSNGMVPTDAYQN-TNVPGVYALGDITGR---------DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp CHHHHTCCCCTTSCCCCCTTSB-CSSTTEEECGGGGTS---------CCCHHHHHHHHHHHHHHHHS
T ss_pred CchhcCCccCCCCCEeECCCCc-cCCCCEEEEeecCCC---------cccHHHHHHHHHHHHHHHcC
Confidence 567789999899999999999 999999999999975 67899999999999999975
No 41
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.7e-38 Score=296.03 Aligned_cols=286 Identities=17% Similarity=0.161 Sum_probs=206.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCccccccc-ccchhhcchhhhcCCCcEEEEeE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-AEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
.++||+|||||+||++||..|++.|++|+|||+.. ..............+.+... ...+...........++.++.++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 93 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE 93 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEee
Confidence 34799999999999999999999999999999853 21110000000000000000 01122222223445678887788
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccc---cccccChHHHHHHHHHHHHhccc
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
|+.++.+.+.+.+.. ++. .+.||+||+|||+.|+.|++||.+.. .++..... ...
T Consensus 94 v~~i~~~~~~~~v~~--~~~--------~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~-----~~~------- 151 (319)
T 3cty_A 94 VRSIKKTQGGFDIET--NDD--------TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC-----DGY------- 151 (319)
T ss_dssp EEEEEEETTEEEEEE--SSS--------EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH-----HGG-------
T ss_pred EEEEEEeCCEEEEEE--CCC--------EEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec-----chh-------
Confidence 999987777655543 444 78999999999999999999886431 12111110 000
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHh
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~ 296 (436)
....++++|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++ .+.+.+.+
T Consensus 152 ----------~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~i~~~~~~~-~~~----~l~~~l~~ 202 (319)
T 3cty_A 152 ----------LFKGKRVVTIGGGNSGAIAAISMSEYV--------------KNVTIIEYMPKYM-CEN----AYVQEIKK 202 (319)
T ss_dssp ----------GGBTSEEEEECCSHHHHHHHHHHTTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHhhC--------------CcEEEEEcCCccC-CCH----HHHHHHhc
Confidence 022358999999999999999998765 8999999865443 223 34456668
Q ss_pred cCCEEEecc-eEEEeCC-----eEEEc---CCc--EEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCC
Q 013810 297 SGVRLVRGI-VKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQ 364 (436)
Q Consensus 297 ~gV~i~~~~-v~~i~~~-----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~ 364 (436)
.||+++.+. +.+++.+ ++.+. +|+ ++++|.||+|+|+.|+ ++++.++++++++|+|.||+++| |+.|
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~-t~~~ 281 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQR-TSVP 281 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCB-CSST
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCc-cCCC
Confidence 899999984 8888643 46665 665 6999999999999999 68888899999999999999999 9999
Q ss_pred CEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 365 DVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 365 ~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
+|||+|||+..+ ++++..|+.||+.||.||.....
T Consensus 282 ~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 282 GVYAAGDVTSGN--------FAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp TEEECSTTBTTC--------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEeecccCcc--------hhhHHHHHHHHHHHHHHHHHHhh
Confidence 999999999852 47899999999999999987654
No 42
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=2.8e-38 Score=316.36 Aligned_cols=307 Identities=18% Similarity=0.200 Sum_probs=220.6
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc---------ceecchhhhh--------------------hcCc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH---------MVFTPLLAST--------------------CVGT 110 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~---------~~~~~~~~~~--------------------~~~~ 110 (436)
+.++||+||||||||++||..|++.|++|+|||+... ++......+. ..+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 3468999999999999999999999999999994211 1111000000 0000
Q ss_pred -------ccccccccchhhc-------chhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEE
Q 013810 111 -------LEFRSVAEPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176 (436)
Q Consensus 111 -------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lVi 176 (436)
.++..+....... ........++.++.+.+..++.. .+.+.. .++. +.+.||+|||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~--~v~v~~-~~g~-------~~~~~d~lvi 156 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSH--TLLAKL-KSGE-------RTITAQTFVI 156 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEEC-TTCC-------EEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCC--EEEEEe-CCCe-------EEEEcCEEEE
Confidence 0110000001111 01122345788888877777644 444432 2332 2699999999
Q ss_pred eCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHH
Q 013810 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 256 (436)
Q Consensus 177 AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~ 256 (436)
|||+.|+.|++||.+...++. .+. +.+...| ++++|||+|++|+|+|..|++++
T Consensus 157 ATGs~p~~p~i~G~~~~~~~~---~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g--- 210 (483)
T 3dgh_A 157 AVGGRPRYPDIPGAVEYGITS---DDL----------FSLDREP----------GKTLVVGAGYIGLECAGFLKGLG--- 210 (483)
T ss_dssp CCCEEECCCSSTTHHHHCBCH---HHH----------TTCSSCC----------CEEEEECCSHHHHHHHHHHHHTT---
T ss_pred eCCCCcCCCCCCCcccccCcH---HHH----------hhhhhcC----------CcEEEECCCHHHHHHHHHHHHcC---
Confidence 999999999999975433322 111 1122333 38999999999999999999877
Q ss_pred HHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C---eEEEcCCc-----EEecc
Q 013810 257 VRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGT-----EVPYG 325 (436)
Q Consensus 257 ~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~---~v~~~~g~-----~i~~D 325 (436)
.+|++++++.+++.+++++.+.+.+.|++.||+++.+. +.+++. + .|++.++. ++++|
T Consensus 211 -----------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D 279 (483)
T 3dgh_A 211 -----------YEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYD 279 (483)
T ss_dssp -----------CEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEES
T ss_pred -----------CEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcC
Confidence 89999999888899999999999999999999999994 888863 2 26666553 79999
Q ss_pred eEEEecCCCCc-hhc--ccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhh
Q 013810 326 LLVWSTGVGPS-TLV--KSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPS 402 (436)
Q Consensus 326 ~vi~a~G~~p~-~~~--~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 402 (436)
.|++|+|++|+ .++ +..++++++ |+|.||+++| |+.|+|||+|||+.. .+++++.|..||+.||+||
T Consensus 280 ~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~-t~~~~IyA~GD~~~~--------~~~~~~~A~~~g~~aa~~i 349 (483)
T 3dgh_A 280 TVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEA-TNVANIYAVGDIIYG--------KPELTPVAVLAGRLLARRL 349 (483)
T ss_dssp EEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCB-CSSTTEEECSTTBTT--------SCCCHHHHHHHHHHHHHHH
T ss_pred EEEECcccccCcCcCCchhcCccccC-CEEEECcCCc-cCCCCEEEEEcccCC--------CCccHHHHHHHHHHHHHHH
Confidence 99999999999 454 788999988 9999999999 999999999999842 1788999999999999999
Q ss_pred hhhc--------CCceeeecchhHHHHHH
Q 013810 403 FLLA--------RNWCWFFDVCSLTSILN 423 (436)
Q Consensus 403 ~~~~--------~~~~~~~~~~~~~~~~~ 423 (436)
+... .+++.+.+..+..++++
T Consensus 350 ~g~~~~~~~~~~~p~~~~~~p~~a~vGlt 378 (483)
T 3dgh_A 350 YGGSTQRMDYKDVATTVFTPLEYACVGLS 378 (483)
T ss_dssp HSCCCCCCCCTTCCEEECSSSEEEEEECC
T ss_pred cCCCCCcCCCCCCCEEEECCCccEEEeCC
Confidence 8532 34555656555555533
No 43
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1e-37 Score=312.14 Aligned_cols=292 Identities=17% Similarity=0.207 Sum_probs=211.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh--------------------hcCcc------cccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST--------------------CVGTL------EFRS 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~--------------------~~~~~------~~~~ 115 (436)
++||+|||||+||++||..|++.|++|+|||+++.+.......+. ..+.. +...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 479999999999999999999999999999997654321100000 00100 0000
Q ss_pred ccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcc----cCCCCceeeeccEEEEeCCCCCCC
Q 013810 116 VAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELR----TLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 116 ~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~----~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
+.. .+...........++.++.+.+..++. +.+.+... +|.. .......++.||+||+|||+.|..
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~~~-~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDP--HHLEVSLT-AGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET--TEEEEEEE-EEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccC--CEEEEEec-CCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 000 000001122344678888887655553 45554321 2200 000001278999999999999988
Q ss_pred CC-CCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcC
Q 013810 185 FG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (436)
Q Consensus 185 ~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~ 263 (436)
|+ ++ .+..++ +..++.. +...| ++++|||+|++|+|+|..|++++
T Consensus 163 ~~~i~-~~~~v~---~~~~~~~----------~~~~~----------~~vvViGgG~ig~E~A~~l~~~G---------- 208 (482)
T 1ojt_A 163 LPFIP-EDPRII---DSSGALA----------LKEVP----------GKLLIIGGGIIGLEMGTVYSTLG---------- 208 (482)
T ss_dssp CSSCC-CCTTEE---CHHHHTT----------CCCCC----------SEEEEESCSHHHHHHHHHHHHHT----------
T ss_pred CCCCC-ccCcEE---cHHHHhc----------ccccC----------CeEEEECCCHHHHHHHHHHHHcC----------
Confidence 77 66 333222 3332221 22223 49999999999999999999877
Q ss_pred CCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEcC----CcEEecceEEEecCC
Q 013810 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILND----GTEVPYGLLVWSTGV 333 (436)
Q Consensus 264 ~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~----g~~i~~D~vi~a~G~ 333 (436)
.+|+++++. .+++.+++++.+.+.+.|++.||+++.+. |.+++.+ .+++.+ |+++++|.|++|+|+
T Consensus 209 ----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 209 ----SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ----CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred ----CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 899999995 67888999999999999999999999994 8888642 366666 778999999999999
Q ss_pred CCc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 334 GPS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 334 ~p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
+|+ ++ ++.++++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||.||..
T Consensus 285 ~p~~~~l~~~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 285 APNGKLISAEKAGVAVTDRGFIEVDKQMR-TNVPHIYAIGDIVGQ---------PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp EECGGGTTGGGTTCCCCTTSCCCCCTTSB-CSSTTEEECGGGTCS---------SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCChhhcCceeCCCCCEeeCCCcc-cCCCCEEEEEcccCC---------CccHHHHHHHHHHHHHHHcC
Confidence 999 45 688899999889999999999 899999999999985 67899999999999999985
No 44
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=2.1e-38 Score=299.77 Aligned_cols=287 Identities=16% Similarity=0.141 Sum_probs=194.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhh---------cCcccccccccchhhcchhhhcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTC---------VGTLEFRSVAEPIARIQPAISREP 131 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 131 (436)
..+||+||||||||++||.+|++.|++|+|||+.......+. +.+ .+...... ...+...........
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~--G~~~~~~~i~~~~g~~~~i~-~~~l~~~~~~~~~~~ 79 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG--GQLTTTTIIENFPGFPNGID-GNELMMNMRTQSEKY 79 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT--CGGGGSSEECCSTTCTTCEE-HHHHHHHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC--CCcCChHHhhhccCCcccCC-HHHHHHHHHHHHhhc
Confidence 358999999999999999999999999999998754222110 110 01100000 011222222234456
Q ss_pred CcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccc-cccccChHHHHHHHHHH
Q 013810 132 GSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN-ATFLREVHHAQEIRRKL 210 (436)
Q Consensus 132 ~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~~ 210 (436)
+..+....+.............. .++. ++.||+||||||++|+.|++||.+.. ..............
T Consensus 80 ~~~~~~~~v~~~~~~~~~~~~~~-~~~~--------~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~--- 147 (314)
T 4a5l_A 80 GTTIITETIDHVDFSTQPFKLFT-EEGK--------EVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAV--- 147 (314)
T ss_dssp TCEEECCCEEEEECSSSSEEEEE-TTCC--------EEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTS---
T ss_pred CcEEEEeEEEEeecCCCceEEEE-CCCe--------EEEEeEEEEcccccccccCCCccccccccceeeehhhhhhh---
Confidence 67777777777776655544432 3444 89999999999999999999997521 12222221111100
Q ss_pred HHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHH
Q 013810 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA 290 (436)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~ 290 (436)
....+++++|||+|++|+|+|..|++++ .+|+++++...... .+. ..
T Consensus 148 ---------------~~~~~~~vvViGgG~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~~-~~~---~~ 194 (314)
T 4a5l_A 148 ---------------PIFRNKVLMVVGGGDAAMEEALHLTKYG--------------SKVIILHRRDAFRA-SKT---MQ 194 (314)
T ss_dssp ---------------GGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHH---HH
T ss_pred ---------------hhcCCCeEEEECCChHHHHHHHHHHHhC--------------Ceeeeecccccccc-cch---hh
Confidence 0123458999999999999999999877 89999998543221 122 23
Q ss_pred HHHHHhcCCEEEecc-eEEEeC-----CeEEE-----cCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCC
Q 013810 291 TTQLSKSGVRLVRGI-VKDVDS-----QKLIL-----NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWL 358 (436)
Q Consensus 291 ~~~l~~~gV~i~~~~-v~~i~~-----~~v~~-----~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~ 358 (436)
.+.+...+++.+... +.++.. .++.+ .+++++++|.|++++|++|+ +++. ..+..+++|++ ||+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~-~~~~~~~~G~i-v~~~~ 272 (314)
T 4a5l_A 195 ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLG-GQVKTADDGYI-LTEGP 272 (314)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCB-CCBTT
T ss_pred hhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhc-ccceEcCCeeE-eCCCC
Confidence 344555677777663 555532 22333 34567999999999999999 4554 45777888866 88899
Q ss_pred CCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 359 ~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
| |+.|+|||+|||++.+ .+++..|+.||+.||.+|..+.
T Consensus 273 ~-Ts~pgIyA~GDv~~~~--------~~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 273 K-TSVDGVFACGDVCDRV--------YRQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp B-CSSTTEEECSTTTCSS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCCCCEEEEEeccCCc--------chHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999863 4678899999999999997654
No 45
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.3e-38 Score=310.77 Aligned_cols=285 Identities=21% Similarity=0.297 Sum_probs=212.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh----hh-----------hh-----cCcc------cccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS-----------TC-----VGTL------EFRS 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~----~~-----------~~-----~~~~------~~~~ 115 (436)
++||+|||||+||++||..|++.|++|+|||++ .+...... +. .. .+.. +...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 478999999999999999999999999999997 32211000 00 00 0000 0000
Q ss_pred ccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCC-cccCCCCceeeeccEEEEeCCCCCCCCCC
Q 013810 116 VAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDE-LRTLEPWKFKISYDKLVIALGAEASTFGI 187 (436)
Q Consensus 116 ~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g-~~~~~~~~~~~~~d~lViAtG~~~~~~~i 187 (436)
+.. .+...........++.++.+++..++. +.+.+.. .+| . ++.||+||+|||++|..|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~--~~v~V~~-~~G~~--------~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA--NTVRVVN-GDSAQ--------TYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEET--TEEEEEE-TTEEE--------EEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CeEEEEe-CCCcE--------EEEeCEEEEecCCCCCCCCC
Confidence 000 011111223445689998887766664 3455432 234 3 78999999999999999998
Q ss_pred CCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013810 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (436)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~ 267 (436)
+|.+..++ +..++.. +...| ++++|||+|++|+|+|..|++++
T Consensus 151 ~g~~~~v~---~~~~~~~----------~~~~~----------~~vvViGgG~~g~e~A~~l~~~g-------------- 193 (455)
T 1ebd_A 151 FKFSNRIL---DSTGALN----------LGEVP----------KSLVVIGGGYIGIELGTAYANFG-------------- 193 (455)
T ss_dssp BCCCSSEE---CHHHHHT----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCccceEe---cHHHHhc----------cccCC----------CeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 88754322 3333221 12223 49999999999999999999876
Q ss_pred cEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEec-ceEEEeC--CeE--EEc---CCcEEecceEEEecCCCCc-h
Q 013810 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QKL--ILN---DGTEVPYGLLVWSTGVGPS-T 337 (436)
Q Consensus 268 ~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~v--~~~---~g~~i~~D~vi~a~G~~p~-~ 337 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+ +|.+++. +.+ .+. +++++++|.||+|+|++|+ +
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 899999995 5778899999999999999999999998 4888864 333 333 4567999999999999999 4
Q ss_pred h--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 338 L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 338 ~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
+ ++.++++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||+||...
T Consensus 274 ~l~~~~~g~~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 274 ELGLEQIGIKMTNRGLIEVDQQCR-TSVPNIFAIGDIVPG---------PALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp SSSTTTTTCCBCTTSCBCCCTTCB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHTSC
T ss_pred cCChhhcCCccCCCCCEeeCCCcc-cCCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHHcCC
Confidence 5 678889998899999999999 999999999999985 678999999999999999853
No 46
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.2e-38 Score=316.59 Aligned_cols=309 Identities=18% Similarity=0.148 Sum_probs=221.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc--------ceecchhhh---------------h------hcCccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH--------MVFTPLLAS---------------T------CVGTLE 112 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~--------~~~~~~~~~---------------~------~~~~~~ 112 (436)
.|||+||||||||++||.++++.|.+|+|||+... ++...+..+ . ..|. .
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi-~ 120 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW-K 120 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE-E
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc-c
Confidence 48999999999999999999999999999997532 221100000 0 0000 0
Q ss_pred ccccccch--------------hhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeC
Q 013810 113 FRSVAEPI--------------ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIAL 178 (436)
Q Consensus 113 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAt 178 (436)
......++ ........+..++.++.+...-++. +.+.+....+.. ..+.+.+|++||||
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~~v~V~~~~~~~-----~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--NTVSYYLKGDLS-----KEETVTGKYILIAT 193 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--TEEEEEEC--CC-----CEEEEEEEEEEECC
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--CcceEeecccCC-----ceEEEeeeeEEecc
Confidence 00000000 0001112334678888877666654 344443211111 02379999999999
Q ss_pred CCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHH
Q 013810 179 GAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (436)
Q Consensus 179 G~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~ 257 (436)
|++|..|+.++.. +.+++..+ .+.+..+|. +++|||||++|+|+|..++++|
T Consensus 194 Gs~P~~P~~~~~~~~~~~ts~~-------------~l~l~~lP~----------~lvIIGgG~IGlE~A~~~~~lG---- 246 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSITSDD-------------IFSLKKDPG----------KTLVVGASYVALECSGFLNSLG---- 246 (542)
T ss_dssp CEEECCCSSSBTHHHHCBCHHH-------------HTTCSSCCC----------SEEEECCSHHHHHHHHHHHHHT----
T ss_pred CCCCCCCCcccCCCccccCchh-------------hhccccCCc----------eEEEECCCHHHHHHHHHHHhcC----
Confidence 9999988655443 33333222 134667776 9999999999999999999998
Q ss_pred HhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecC
Q 013810 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTG 332 (436)
Q Consensus 258 ~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G 332 (436)
.+||+++++++++.+++++.+.+.+.|++.||+++.+. +.+++. + .|.+.+++++.+|.|++|+|
T Consensus 247 ----------~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 247 ----------YDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred ----------CeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 99999999889999999999999999999999999994 766653 3 35667888999999999999
Q ss_pred CCCc-hh--cccCCCCCCCCCc-EEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh---
Q 013810 333 VGPS-TL--VKSLDLPKSPGGR-IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL--- 405 (436)
Q Consensus 333 ~~p~-~~--~~~~~l~~~~~G~-i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--- 405 (436)
++|| +. ++..++.++.+|. |.+|+++| |+.|+|||+|||+.. +|.+++.|..||+.|++||+..
T Consensus 317 R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~-Ts~p~IyAiGDv~~~--------~p~La~~A~~eg~~aa~~i~g~~~~ 387 (542)
T 4b1b_A 317 RKGDIDGLNLESLNMNVNKSNNKIIADHLSC-TNIPSIFAVGDVAEN--------VPELAPVAIKAGEILARRLFKDSDE 387 (542)
T ss_dssp EEESCGGGCGGGTTCCEETTTTEECCCTTSB-CSSTTEEECTTSBTT--------CCCCHHHHHHHHHHHHHHHHSCCCC
T ss_pred ccCCccccCcccceeeecccCceEecccccc-ccCCCeEEeccccCC--------chhHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999 32 5666787776655 57889999 999999999999964 2689999999999999999853
Q ss_pred -----cCCceeeecchhHHHHHHH
Q 013810 406 -----ARNWCWFFDVCSLTSILNR 424 (436)
Q Consensus 406 -----~~~~~~~~~~~~~~~~~~~ 424 (436)
..|++.+.+..+..++++.
T Consensus 388 ~~d~~~iP~~vft~PeiA~VGlTE 411 (542)
T 4b1b_A 388 IMDYSYIPTSIYTPIEYGACGYSE 411 (542)
T ss_dssp CCCCSSCCEEECSSSCEEEEECCH
T ss_pred ccCCCCCceEEeCCCCeEEEeCCH
Confidence 2456666666666666443
No 47
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.5e-38 Score=315.83 Aligned_cols=291 Identities=19% Similarity=0.257 Sum_probs=205.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec-------ch---h-----hhhh-----cCc-----cccccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-------PL---L-----ASTC-----VGT-----LEFRSV 116 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~-------~~---~-----~~~~-----~~~-----~~~~~~ 116 (436)
++||+|||||+||++||..|++.|++|+|||+++. +.. |. + .... .+. .++..+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~-GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL-GGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSST-THHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCc-CccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 47999999999999999999999999999999852 111 10 0 0000 000 000000
Q ss_pred c-------cchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEe----------cCCcccCCCCceeeeccEEEEeCC
Q 013810 117 A-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETV----------TDELRTLEPWKFKISYDKLVIALG 179 (436)
Q Consensus 117 ~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~----------~~g~~~~~~~~~~~~~d~lViAtG 179 (436)
. ..+...........++.++.+++..++. +.+.+... .++. ++.||+||||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~--------~~~~d~lViAtG 150 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEE--------ILEGRNILIAVG 150 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC------------------------------------CBSSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCce--------EEEeCEEEECCC
Confidence 0 0011111122345688998887766654 44544320 1133 789999999999
Q ss_pred CCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHh
Q 013810 180 AEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ 259 (436)
Q Consensus 180 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~ 259 (436)
+.|..|++||.+ .+++. .++. .+.. +++++|||+|++|+|+|..|++++
T Consensus 151 s~p~~p~i~G~~-~~~~~---~~~~----------~~~~-----------~~~vvViGgG~ig~E~A~~l~~~g------ 199 (500)
T 1onf_A 151 NKPVFPPVKGIE-NTISS---DEFF----------NIKE-----------SKKIGIVGSGYIAVELINVIKRLG------ 199 (500)
T ss_dssp CCBCCCSCTTGG-GCEEH---HHHT----------TCCC-----------CSEEEEECCSHHHHHHHHHHHTTT------
T ss_pred CCCCCCCCCCCC-cccCH---HHHh----------ccCC-----------CCeEEEECChHHHHHHHHHHHHcC------
Confidence 999999999873 33322 1111 1111 349999999999999999999876
Q ss_pred hhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-----eEEEcCCcE-EecceEEEec
Q 013810 260 RYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTE-VPYGLLVWST 331 (436)
Q Consensus 260 ~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-----~v~~~~g~~-i~~D~vi~a~ 331 (436)
.+|+++++. .+++.+++++.+.+.+.|++.||+++++. |++++.+ .|++++|++ +++|.||+|+
T Consensus 200 --------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~ 271 (500)
T 1onf_A 200 --------IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCV 271 (500)
T ss_dssp --------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECC
T ss_pred --------CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECC
Confidence 899999994 67888999999999999999999999995 8888642 467788988 9999999999
Q ss_pred CCCCch--h-cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccC------------------------CC-Ccc
Q 013810 332 GVGPST--L-VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLES------------------------TG-KTV 383 (436)
Q Consensus 332 G~~p~~--~-~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~------------------------~~-~~~ 383 (436)
|++|+. + ++.+++++ ++|+|.||+++| |+.|+|||+|||+..+.. ++ ...
T Consensus 272 G~~p~~~~l~~~~~g~~~-~~G~i~vd~~~~-t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 349 (500)
T 1onf_A 272 GRSPDTENLKLEKLNVET-NNNYIVVDENQR-TSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFY 349 (500)
T ss_dssp CBCCTTTTSSCTTTTCCB-SSSCEEECTTCB-CSSSSEEECSTTEEEC------------------------------CB
T ss_pred CCCcCCCCCCchhcCccc-cCCEEEECCCcc-cCCCCEEEEeccccccccccccccccccccccccccccccccccccCC
Confidence 999994 4 67889988 789999999999 999999999999943210 00 002
Q ss_pred CCccHHHHHHHHHHHHhhhhh
Q 013810 384 LPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 384 ~~~~~~~A~~~g~~aa~~i~~ 404 (436)
.+++++.|.+||+.||+||..
T Consensus 350 ~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 350 NVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CCCCHHHHHHHHHHHHHHHHS
T ss_pred cccchhHHHHHHHHHHHHHhC
Confidence 377899999999999999975
No 48
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2.2e-37 Score=294.39 Aligned_cols=284 Identities=17% Similarity=0.176 Sum_probs=201.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh---hhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---TCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
++||+|||||+||++||..|++.|++|+|||++. ......... ...+.... -....+...........++.++.+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~gv~~~~~ 85 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEP-IAGMELAQRMHQQAEKFGAKVEMD 85 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSC-BCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCC-CCHHHHHHHHHHHHHHcCCEEEee
Confidence 4799999999999999999999999999999973 211111000 00010000 001122222222344567888888
Q ss_pred EeEeEeCC--CCE-EEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHH
Q 013810 139 HCAGIDTD--NHV-VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLL 212 (436)
Q Consensus 139 ~v~~id~~--~~~-v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~ 212 (436)
+|+.++.+ .+. +.+.. .++. .+.||+||+|||+.|+.|++||.+. ..++.....+ ...
T Consensus 86 ~v~~i~~~~~~~~~~~v~~-~~g~--------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~-----~~~-- 149 (325)
T 2q7v_A 86 EVQGVQHDATSHPYPFTVR-GYNG--------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCD-----GFF-- 149 (325)
T ss_dssp CEEEEEECTTSSSCCEEEE-ESSC--------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHH-----GGG--
T ss_pred eEEEEEeccCCCceEEEEE-CCCC--------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCC-----HHH--
Confidence 99999876 432 22221 2555 7999999999999999999998753 1122111111 000
Q ss_pred hccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHH
Q 013810 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATT 292 (436)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~ 292 (436)
..+++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+. .++.+ ..+
T Consensus 150 ---------------~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~---~~~ 196 (325)
T 2q7v_A 150 ---------------YKGKKVVVIGGGDAAVEEGMFLTKFA--------------DEVTVIHRRDTLR-ANKVA---QAR 196 (325)
T ss_dssp ---------------GTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCC-SCHHH---HHH
T ss_pred ---------------cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeCCCcCC-cchHH---HHH
Confidence 22358999999999999999998765 8999999965432 23332 223
Q ss_pred HHHhcCCEEEecc-eEEEeCC----eEEEc---CCc--EEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCC
Q 013810 293 QLSKSGVRLVRGI-VKDVDSQ----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVP 361 (436)
Q Consensus 293 ~l~~~gV~i~~~~-v~~i~~~----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t 361 (436)
.+++.||+++.+. +++++.+ +|++. +|+ ++++|.||+|+|++|+ ++++.+ ++++++|+|.||+++| |
T Consensus 197 l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g~i~vd~~~~-t 274 (325)
T 2q7v_A 197 AFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDGYVDVRDEIY-T 274 (325)
T ss_dssp HHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCBTTTB-C
T ss_pred HHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCccEecCCCCc-c
Confidence 3344699999984 8888654 56775 675 7999999999999999 677776 7788899999999999 8
Q ss_pred CCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 362 SVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 362 ~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
+.|+|||+|||+..+ ++++..|+.||+.||.||....
T Consensus 275 ~~~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l 311 (325)
T 2q7v_A 275 NIPMLFAAGDVSDYI--------YRQLATSVGAGTRAAMMTERQL 311 (325)
T ss_dssp SSTTEEECSTTTCSS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcc--------HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999852 5789999999999999998654
No 49
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=7.4e-37 Score=304.92 Aligned_cols=303 Identities=17% Similarity=0.149 Sum_probs=218.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh---------------hh-----c-Cc------ccc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---------------TC-----V-GT------LEF 113 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~---------------~~-----~-~~------~~~ 113 (436)
.++||+|||||+||++||.+|++.|++|+|||++. ++......+ .. . |. .+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 35899999999999999999999999999999973 211100000 00 0 10 000
Q ss_pred ccccc-------chhh-cchhhhcCC-CcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 114 RSVAE-------PIAR-IQPAISREP-GSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 114 ~~~~~-------~~~~-~~~~~~~~~-~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..+.. .+.. ....+.... ++.++.+++..++.. .+.+.. .+|. +..+.||+||||||++|+.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~~~v~~-~~g~------~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRL-NEGG------ERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETT--EEEEEE-TTSS------EEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCC--EEEEEe-CCCc------eEEEEeCEEEEeCCCCCCC
Confidence 10000 0000 011223344 899999988888754 444432 2441 1178999999999999999
Q ss_pred CCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 013810 185 FGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (436)
Q Consensus 185 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~ 264 (436)
|++||.+... ..+..++.+ +... +++++|||+|++|+|+|..|.+++
T Consensus 153 p~i~G~~~~~--~~~~~~~~~----------~~~~----------~~~vvViGgG~~g~E~A~~l~~~g----------- 199 (467)
T 1zk7_A 153 PPIPGLKESP--YWTSTEALA----------SDTI----------PERLAVIGSSVVALELAQAFARLG----------- 199 (467)
T ss_dssp CCCTTTTTSC--CBCHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCCcCc--eecHHHHhc----------cccc----------CCEEEEECCCHHHHHHHHHHHHcC-----------
Confidence 9999975321 123333222 1222 349999999999999999999876
Q ss_pred CCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce--EEEcCCcEEecceEEEecCCCCc-h
Q 013810 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPS-T 337 (436)
Q Consensus 265 ~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~--v~~~~g~~i~~D~vi~a~G~~p~-~ 337 (436)
.+|+++++. .+++ +++++.+.+.+.+++.||+++.+. |.+++. +. |.++ +.++++|.||+|+|.+|+ .
T Consensus 200 ---~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 200 ---SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp ---CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred ---CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 899999995 5677 899999999999999999999984 888853 22 4444 568999999999999998 3
Q ss_pred h--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc-------CC
Q 013810 338 L--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA-------RN 408 (436)
Q Consensus 338 ~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~-------~~ 408 (436)
+ ++..+++++++|+|.||+++| |+.|+|||+|||+.. +..+..|..||+.||.||.... .+
T Consensus 275 ~l~l~~~gl~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~p 344 (467)
T 1zk7_A 275 SLALDAAGVTVNAQGAIVIDQGMR-TSNPNIYAAGDCTDQ---------PQFVYVAAAAGTRAAINMTGGDAALDLTAMP 344 (467)
T ss_dssp TSCGGGGTCCBCTTSCBCCCTTCB-CSSTTEEECSTTBSS---------CCCHHHHHHHHHHHHHHHTTCCCCCCCTTCE
T ss_pred cCCchhcCCcCCCCCCEEECCCcc-cCCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHHcCCCcccCCCCCC
Confidence 3 577889988899999999999 899999999999986 6789999999999999997532 23
Q ss_pred ceeeecchhHHHH
Q 013810 409 WCWFFDVCSLTSI 421 (436)
Q Consensus 409 ~~~~~~~~~~~~~ 421 (436)
++.+++.....+|
T Consensus 345 ~~~~~~~~~a~vG 357 (467)
T 1zk7_A 345 AVVFTDPQVATVG 357 (467)
T ss_dssp EEECSSSEEEEEE
T ss_pred EEEecCCceEEEe
Confidence 4445555444444
No 50
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=6.1e-38 Score=299.57 Aligned_cols=293 Identities=15% Similarity=0.148 Sum_probs=206.8
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC----cceecchhhhh---hcCcccccccccchhhcchhhhcCCC
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN----HMVFTPLLAST---CVGTLEFRSVAEPIARIQPAISREPG 132 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (436)
.+++||+|||||+|||+||..|++.|++|+|||+.+ ........... ..+..... ....+...........+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGL-TGSELMDRMREQSTKFG 98 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCE-EHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccC-CHHHHHHHHHHHHHHcC
Confidence 345899999999999999999999999999999965 21111000000 00111100 01122222223344568
Q ss_pred cEEEEeEeEeEeCCCCEEEEEEe--cCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHH
Q 013810 133 SYFFLSHCAGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 210 (436)
Q Consensus 133 ~~~~~~~v~~id~~~~~v~~~~~--~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 210 (436)
+.++.+.|+.++.+.+.+.+... .++. .+.||+||+|||+.++.|++||.+.. ....+.....+...+
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~--------~~~~d~vvlAtG~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~ 168 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAE--------PVTTDAIILATGASAKRMHLPGEETY--WQKGISACAVCDGAV 168 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSC--------CEEEEEEEECCCEEECCCCCTTHHHH--BTTTEESCHHHHTTS
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCc--------EEEeCEEEECcCCCcCCCCCCCchhc--cCccEEEchhcccch
Confidence 88888889999998888877543 2333 78999999999999999999986421 111111111111100
Q ss_pred HHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHH
Q 013810 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA 290 (436)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~ 290 (436)
+ ...+++++|||+|++|+|+|..|.+.+ .+|+++++.+.+.. .+.+
T Consensus 169 ---------~------~~~~~~v~vvG~G~~g~e~a~~l~~~g--------------~~v~~v~~~~~~~~-----~~~~ 214 (338)
T 3itj_A 169 ---------P------IFRNKPLAVIGGGDSACEEAQFLTKYG--------------SKVFMLVRKDHLRA-----STIM 214 (338)
T ss_dssp ---------G------GGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-----CHHH
T ss_pred ---------h------hcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccCC-----CHHH
Confidence 0 123458999999999999999998765 89999999654322 2334
Q ss_pred HHHHHhc-CCEEEecc-eEEEeCCe-----EEEcC-----CcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEe-CC
Q 013810 291 TTQLSKS-GVRLVRGI-VKDVDSQK-----LILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGI-DE 356 (436)
Q Consensus 291 ~~~l~~~-gV~i~~~~-v~~i~~~~-----v~~~~-----g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~v-d~ 356 (436)
.+.+.+. ||+++.+. +.+++.+. |++.+ ++++++|.||+|+|+.|+ .++.. +++++++|++.+ |+
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G~i~v~~~ 293 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAGYIKTVPG 293 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTSCBCCCTT
T ss_pred HHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCCcEEEcCc
Confidence 4555554 99999984 88887542 77765 467999999999999999 46655 888899999995 77
Q ss_pred CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 357 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 357 ~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
+++ |+.|+|||+|||+..+ ++.+..|+.||+.||.+|.....
T Consensus 294 ~~~-t~~~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 294 SSL-TSVPGFFAAGDVQDSK--------YRQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp SSB-CSSTTEEECGGGGCSS--------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccc-cCCCCEEEeeccCCCC--------ccceeeehhhhHHHHHHHHHHHh
Confidence 788 8999999999999742 68899999999999999987654
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.6e-38 Score=297.34 Aligned_cols=283 Identities=15% Similarity=0.127 Sum_probs=185.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCccccccc-ccchhhcchhhhcCCCcEEEEe-
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-AEPIARIQPAISREPGSYFFLS- 138 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~- 138 (436)
..+||+||||||||++||.+|++.|++|+|||+... .......+...+.+..... ...+..............+...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGD 83 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhcccccccee
Confidence 358999999999999999999999999999998532 1111000000000100000 0011111111122233444443
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccc---cccccChHHHHHHHHHHHHhcc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLM 215 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~ 215 (436)
.+...+........ .++. ++.||+||||||++|+.|++||.+.. ..+.....+...
T Consensus 84 ~~~~~~~~~~~~~~---~~~~--------~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~---------- 142 (312)
T 4gcm_A 84 IKSVEDKGEYKVIN---FGNK--------ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAF---------- 142 (312)
T ss_dssp CCEEEECSSCEEEE---CSSC--------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGG----------
T ss_pred eeeeeeeecceeec---cCCe--------EEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccc----------
Confidence 33334443333322 2454 89999999999999999999997531 122221111100
Q ss_pred ccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCcccHHHHHHHHHHH
Q 013810 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQL 294 (436)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~~~~~~~~~~~~~l 294 (436)
..+++|+|||+|++|+|+|..|++++ .+|+++++.+ +++.. ....+.+
T Consensus 143 ------------~~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~-----~~~~~~~ 191 (312)
T 4gcm_A 143 ------------FKNKRLFVIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQR-----ILQDRAF 191 (312)
T ss_dssp ------------GTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCH-----HHHHHHH
T ss_pred ------------cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcch-----hHHHHHH
Confidence 22359999999999999999998876 8999999964 43321 1223455
Q ss_pred HhcCCEEEecc-eEEEe--CC---e--EE-E--cCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCC
Q 013810 295 SKSGVRLVRGI-VKDVD--SQ---K--LI-L--NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPS 362 (436)
Q Consensus 295 ~~~gV~i~~~~-v~~i~--~~---~--v~-~--~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~ 362 (436)
+..++...... +..+. .. . .. . .++..+++|.|++++|..|+ .++..+++. +++|+|.||+++| |+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~-~~~G~I~vd~~~~-Ts 269 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGIT-NDVGYIVTKDDMT-TS 269 (312)
T ss_dssp HCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCB-CTTSCBCCCTTSB-CS
T ss_pred HhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhccee-cCCCeEeeCCCCc-cC
Confidence 66677776653 22221 11 1 11 1 23357999999999999999 577777775 5689999999999 99
Q ss_pred CCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 363 VQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 363 ~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
+|+|||+|||++.+ +++++.|+.||+.||.||..+.
T Consensus 270 ~pgIyA~GDv~~~~--------~~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 270 VPGIFAAGDVRDKG--------LRQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp STTEEECSTTBSCS--------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCCc--------chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999742 5789999999999999998654
No 52
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.5e-38 Score=312.31 Aligned_cols=286 Identities=19% Similarity=0.239 Sum_probs=211.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh----hh-----------hh------cCcc-----cccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS-----------TC------VGTL-----EFRS 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~----~~-----------~~------~~~~-----~~~~ 115 (436)
++||+|||||+||++||..|++.|++|+|||++. +...... +. .. .+.. ++..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 4799999999999999999999999999999973 2111000 00 00 0000 0000
Q ss_pred ccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCC
Q 013810 116 VAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (436)
Q Consensus 116 ~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~ 188 (436)
+.. .+...........++.++.+.+..+ +.+.+.+.. .+|. ..++.||+||+|||+.|+.|+++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~i--d~~~v~V~~-~~G~------~~~~~~d~lViAtG~~~~~~~~~ 152 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFA--DANTLLVDL-NDGG------TESVTFDNAIIATGSSTRLVPGT 152 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEES--SSSEEEEEE-TTSC------CEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCeEEEEe-CCCc------eEEEEcCEEEECCCCCCCCCCCC
Confidence 000 0001111223346788887765544 345565543 2441 01799999999999999999988
Q ss_pred CCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013810 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (436)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~ 268 (436)
|.+..+ .+..++.. +...| ++++|||+|++|+|+|..|.+++ .
T Consensus 153 g~~~~~---~~~~~~~~----------~~~~~----------~~vvViGgG~~g~E~A~~l~~~g--------------~ 195 (464)
T 2a8x_A 153 SLSANV---VTYEEQIL----------SRELP----------KSIIIAGAGAIGMEFGYVLKNYG--------------V 195 (464)
T ss_dssp CCBTTE---ECHHHHHT----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred CCCceE---EecHHHhh----------ccccC----------CeEEEECCcHHHHHHHHHHHHcC--------------C
Confidence 875432 23333221 12223 49999999999999999999876 8
Q ss_pred EEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC--e--EEEc-CC--cEEecceEEEecCCCCc-hh
Q 013810 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ--K--LILN-DG--TEVPYGLLVWSTGVGPS-TL 338 (436)
Q Consensus 269 ~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~--~--v~~~-~g--~~i~~D~vi~a~G~~p~-~~ 338 (436)
+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ . +.+. +| +++++|.|++|+|++|+ ++
T Consensus 196 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 196 DVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred eEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 99999995 67888999999999999999999999994 8888643 2 3443 66 67999999999999999 45
Q ss_pred --cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 339 --VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 339 --~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
++.++++++++|+|.||+++| |+.|+|||+|||+.. ++++..|..||+.||+||..
T Consensus 276 l~~~~~gl~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 276 YGLDKAGVALTDRKAIGVDDYMR-TNVGHIYAIGDVNGL---------LQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp SCHHHHTCCBCTTSSBCCCTTSB-CSSTTEEECGGGGCS---------SCSHHHHHHHHHHHHHHHHT
T ss_pred CCchhcCCccCCCCCEeECcCCc-cCCCCEEEeECcCCC---------ccCHHHHHHHHHHHHHHhcC
Confidence 677899998889999999999 999999999999985 67899999999999999986
No 53
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.7e-38 Score=313.68 Aligned_cols=282 Identities=19% Similarity=0.226 Sum_probs=209.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch----hhh-----------h-----hcCc-----cccccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------T-----CVGT-----LEFRSV 116 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~----~~~-----------~-----~~~~-----~~~~~~ 116 (436)
++||+|||||+||++||..|++.|++|+|||+++ ++.... .+. . ..|. .+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 4899999999999999999999999999999986 211100 000 0 0010 000000
Q ss_pred ccc-------hhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC-CC
Q 013810 117 AEP-------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG-IH 188 (436)
Q Consensus 117 ~~~-------~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~-i~ 188 (436)
... +......+.+..++.++.+++..++. +.+.+. +. ++.||+||||||++|+.|+ ++
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~v~v~----g~--------~~~~d~lViATGs~p~~p~gi~ 150 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGP--KEVEVG----GE--------RYGAKSLILATGSEPLELKGFP 150 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET----TE--------EEEEEEEEECCCEEECCBTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccC--CEEEEc----cE--------EEEeCEEEEcCCCCCCCCCCCC
Confidence 000 00001122344688998887766663 455542 43 7999999999999998876 77
Q ss_pred CCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013810 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (436)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~ 268 (436)
+. ..++ +..++.++ .. ..+++++|||+|++|+|+|..|++++ .
T Consensus 151 ~~-~~v~---~~~~~~~l----------~~---------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~ 193 (464)
T 2eq6_A 151 FG-EDVW---DSTRALKV----------EE---------GLPKRLLVIGGGAVGLELGQVYRRLG--------------A 193 (464)
T ss_dssp CS-SSEE---CHHHHTCG----------GG---------CCCSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred CC-CcEE---cHHHHHhh----------hh---------hcCCEEEEECCCHHHHHHHHHHHHCC--------------C
Confidence 62 3333 33332221 11 02249999999999999999999876 8
Q ss_pred EEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEec-ceEEEeC--Ce--EEEc-C--Cc--EEecceEEEecCCCCc-
Q 013810 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILN-D--GT--EVPYGLLVWSTGVGPS- 336 (436)
Q Consensus 269 ~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~--v~~~-~--g~--~i~~D~vi~a~G~~p~- 336 (436)
+|+++++. .+++.+++++.+.+.+.+++.||+++.+ +|.+++. +. +.+. + |+ ++++|.|++|+|++|+
T Consensus 194 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 194 EVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred eEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 99999995 5778889999999999999999999999 4888864 22 5555 6 76 8999999999999999
Q ss_pred hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 337 TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 337 ~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
++ ++..+++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||+||...
T Consensus 274 ~~l~l~~~g~~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~l~~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 274 EGLGLEKAGVKVDERGFIRVNARME-TSVPGVYAIGDAARP---------PLLAHKAMREGLIAAENAAGK 334 (464)
T ss_dssp TTSSHHHHTCCBCTTSCBCCCTTCB-CSSTTEEECGGGTCS---------SCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCChhhcCceecCCCCEEECCCcc-cCCCCEEEEeccCCC---------cccHHHHHHHHHHHHHHhcCC
Confidence 44 577889888899999999999 899999999999986 678999999999999999853
No 54
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.5e-38 Score=318.67 Aligned_cols=308 Identities=18% Similarity=0.232 Sum_probs=220.6
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC--------cceecchhhh---------------h-----hcCc--
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN--------HMVFTPLLAS---------------T-----CVGT-- 110 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~--------~~~~~~~~~~---------------~-----~~~~-- 110 (436)
.++||+||||||||++||..|++.|++|+|||+.+ .++......+ . ..|.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 35899999999999999999999999999999732 2221100000 0 0000
Q ss_pred -----ccccccccchhh-------cchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeC
Q 013810 111 -----LEFRSVAEPIAR-------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIAL 178 (436)
Q Consensus 111 -----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAt 178 (436)
.++..+...... .........++.++.+++..++. +.+.+.. .+|. ..++.||+|||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~--~~v~v~~-~~g~------~~~~~~d~lViAT 155 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDE--HTVRGVD-KGGK------ATLLSAEHIVIAT 155 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSS--SEEEEEC-TTSC------EEEEEEEEEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CeEEEEe-CCCc------eEEEECCEEEEcC
Confidence 000000000000 01112234578888888776664 3454432 2332 1278999999999
Q ss_pred CCCCCCCC-CCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHH
Q 013810 179 GAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (436)
Q Consensus 179 G~~~~~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~ 257 (436)
|+.|+.|+ +||.+...++. .+. +.+...| ++++|||+|++|+|+|..|++++
T Consensus 156 Gs~p~~p~~i~G~~~~~~~~---~~~----------~~~~~~~----------~~vvViGgG~ig~E~A~~l~~~g---- 208 (488)
T 3dgz_A 156 GGRPRYPTQVKGALEYGITS---DDI----------FWLKESP----------GKTLVVGASYVALECAGFLTGIG---- 208 (488)
T ss_dssp CEEECCCSSCBTHHHHCBCH---HHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT----
T ss_pred CCCCCCCCCCCCcccccCcH---HHH----------HhhhhcC----------CeEEEECCCHHHHHHHHHHHHcC----
Confidence 99999998 99975433322 111 1123334 38999999999999999999876
Q ss_pred HhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC---C--eEEEcC---Cc--EEecce
Q 013810 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q--KLILND---GT--EVPYGL 326 (436)
Q Consensus 258 ~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~---~--~v~~~~---g~--~i~~D~ 326 (436)
.+|+++++..+++.+++++.+.+.+.|++.||+++.+. +.+++. + .+.+.+ |+ ++++|.
T Consensus 209 ----------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (488)
T 3dgz_A 209 ----------LDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDT 278 (488)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESE
T ss_pred ----------CceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCE
Confidence 89999999888899999999999999999999999994 777753 2 245544 54 479999
Q ss_pred EEEecCCCCc-hh--cccCCCCCC-CCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhh
Q 013810 327 LVWSTGVGPS-TL--VKSLDLPKS-PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPS 402 (436)
Q Consensus 327 vi~a~G~~p~-~~--~~~~~l~~~-~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 402 (436)
|++|+|++|+ .+ ++..+++++ ++|+|.||+++| |+.|+|||+|||+.. .+++++.|..||+.||+||
T Consensus 279 vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~--------~~~~~~~A~~~g~~aa~~i 349 (488)
T 3dgz_A 279 VLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEA-TSVPHIYAIGDVAEG--------RPELTPTAIKAGKLLAQRL 349 (488)
T ss_dssp EEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSB-CSSTTEEECGGGBTT--------CCCCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCcccCcCCccccCcEecCCCCeEeECCCCc-cCCCCEEEeEEecCC--------CCcchhHHHHHHHHHHHHH
Confidence 9999999999 44 677899998 789999999999 899999999999842 1778999999999999999
Q ss_pred hhhc--------CCceeeecchhHHHHHH
Q 013810 403 FLLA--------RNWCWFFDVCSLTSILN 423 (436)
Q Consensus 403 ~~~~--------~~~~~~~~~~~~~~~~~ 423 (436)
+... .+++.+.+..+..++++
T Consensus 350 ~g~~~~~~~~~~~p~~~~~~p~~a~vGlt 378 (488)
T 3dgz_A 350 FGKSSTLMDYSNVPTTVFTPLEYGCVGLS 378 (488)
T ss_dssp HSCCCCCCCCTTCCEEECSSSEEEEEECC
T ss_pred cCCCCccCCCCCCCEEEECCCCeEEEeCC
Confidence 8532 34566556655555533
No 55
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.8e-38 Score=315.37 Aligned_cols=308 Identities=20% Similarity=0.209 Sum_probs=219.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh---------------------hcCcc------cc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST---------------------CVGTL------EF 113 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~---------------------~~~~~------~~ 113 (436)
+++||+||||||||++||..|++.|++|+|||+++.++......+. ..+.. ++
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 4589999999999999999999999999999997765432110000 00000 00
Q ss_pred cccc-------cchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 114 RSVA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 114 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..+. ..+...........++.++.+.+..++. +.+.+.. .+|. ..++.||+||||||+.| +.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~v~~-~~g~------~~~~~~d~lViATGs~p--~~ 172 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQ--GKVSVTN-EKGE------EQVLEAKNVVIATGSDV--AG 172 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSS--SEEEEEC-TTSC------EEEEECSEEEECCCEEC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEe-CCCc------eEEEEeCEEEEccCCCC--CC
Confidence 0000 0001111122344678888887766554 4555542 2342 12789999999999986 46
Q ss_pred CCCCcc--ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 013810 187 IHGVKE--NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (436)
Q Consensus 187 i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~ 264 (436)
+||.+. ....+.+..+.. .+...| ++|+|||+|++|+|+|..|++++
T Consensus 173 ipg~~~~~~~~~~~~~~~~~----------~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g----------- 221 (491)
T 3urh_A 173 IPGVEVAFDEKTIVSSTGAL----------ALEKVP----------ASMIVVGGGVIGLELGSVWARLG----------- 221 (491)
T ss_dssp BTTBCCCCCSSSEECHHHHT----------SCSSCC----------SEEEEECCSHHHHHHHHHHHHHT-----------
T ss_pred CCCcccccCCeeEEehhHhh----------hhhhcC----------CeEEEECCCHHHHHHHHHHHHcC-----------
Confidence 677641 111122222211 122233 49999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce--EEEcC---C--cEEecceEEEecCC
Q 013810 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILND---G--TEVPYGLLVWSTGV 333 (436)
Q Consensus 265 ~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~--v~~~~---g--~~i~~D~vi~a~G~ 333 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. +.+++. +. +.+.+ | +++++|.||+|+|+
T Consensus 222 ---~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 222 ---AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ---CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ---CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 899999985 67888999999999999999999999984 888764 22 45542 5 57999999999999
Q ss_pred CCc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc----
Q 013810 334 GPS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA---- 406 (436)
Q Consensus 334 ~p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~---- 406 (436)
+|+ ++ ++..+++++++|+|.||+++| |+.|+|||+|||++. ++++..|..||+.||+||+...
T Consensus 299 ~p~~~~l~l~~~g~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~~~~~~ 368 (491)
T 3urh_A 299 KPSTDGLGLAKAGVVLDSRGRVEIDRHFQ-TSIAGVYAIGDVVRG---------PMLAHKAEDEGVAVAEIIAGQAGHVN 368 (491)
T ss_dssp EECCTTSCHHHHTCCBCTTSCBCCCTTCB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred ccCCCccCchhcCceECCCCCEeECCCCC-CCCCCEEEEEecCCC---------ccchhHHHHHHHHHHHHHcCCCcccC
Confidence 999 44 677899999999999999999 899999999999976 7899999999999999998532
Q ss_pred ---CCceeeecchhHHHHHH
Q 013810 407 ---RNWCWFFDVCSLTSILN 423 (436)
Q Consensus 407 ---~~~~~~~~~~~~~~~~~ 423 (436)
.+++.+++..+..+|++
T Consensus 369 ~~~~p~~~~~~p~~a~vGlt 388 (491)
T 3urh_A 369 YDVIPGVVYTQPEVASVGKT 388 (491)
T ss_dssp TTCCCEEECSSSCEEEEECC
T ss_pred CCCCCEEEEccCCeEEEeCC
Confidence 34555566655555533
No 56
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.1e-38 Score=313.19 Aligned_cols=288 Identities=20% Similarity=0.266 Sum_probs=213.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh---------------------hcCcc------cc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST---------------------CVGTL------EF 113 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~---------------------~~~~~------~~ 113 (436)
.++||+|||||+||++||..|++.|++|+|||+++.+.......+. ..+.. +.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 3589999999999999999999999999999998755332110000 00100 00
Q ss_pred ccccc-------chhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 114 RSVAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 114 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..+.. .+...........++.++.+.+..++. +.+.+.. .+|. ...+.||+||+|||++|..|+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~-~~G~------~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP--SEISVDT-IEGE------NTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEET--TEEEECC-SSSC------CEEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEEEe-CCCc------eEEEEcCEEEECCCCCCCCCC
Confidence 00000 000111122334578888887666664 3454432 2341 127899999999999999999
Q ss_pred CCCCcc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCC
Q 013810 187 IHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (436)
Q Consensus 187 i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~ 265 (436)
++|.+. .+++ ..++.. +...| ++++|||+|++|+|+|..|.+++
T Consensus 156 ~~g~~~~~v~~---~~~~~~----------~~~~~----------~~vvViGgG~~g~e~A~~l~~~g------------ 200 (470)
T 1dxl_A 156 GVTIDEKKIVS---STGALA----------LSEIP----------KKLVVIGAGYIGLEMGSVWGRIG------------ 200 (470)
T ss_dssp TBCCCSSSEEC---HHHHTT----------CSSCC----------SEEEESCCSHHHHHHHHHHHHHT------------
T ss_pred CCCCCcccEEe---HHHhhh----------hhhcC----------CeEEEECCCHHHHHHHHHHHHcC------------
Confidence 988753 3332 222211 12223 49999999999999999999877
Q ss_pred CccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEc---CC--cEEecceEEEecCCC
Q 013810 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVG 334 (436)
Q Consensus 266 ~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~---~g--~~i~~D~vi~a~G~~ 334 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .+.+. +| +++++|.|++|+|++
T Consensus 201 --~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 201 --SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred --CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 899999995 57788999999999999999999999994 8888753 23443 45 679999999999999
Q ss_pred Cc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 335 PS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 335 p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
|+ ++ ++.++++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||.||..
T Consensus 279 p~~~~l~~~~~gl~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 279 PFTSGLNLDKIGVETDKLGRILVNERFS-TNVSGVYAIGDVIPG---------PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp ECCTTSCCTTTTCCBCSSSCBCCCTTCB-CSSTTEEECSTTSSS---------CCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCchhcCCccCCCCCEeECcCCc-cCCCCEEEEeccCCC---------CccHHHHHHHHHHHHHHHcC
Confidence 99 45 678899998889999999999 999999999999985 67899999999999999985
No 57
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=4.7e-38 Score=314.58 Aligned_cols=305 Identities=18% Similarity=0.197 Sum_probs=218.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh----------------h-----hcCcccccccccch
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS----------------T-----CVGTLEFRSVAEPI 120 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~----------------~-----~~~~~~~~~~~~~~ 120 (436)
++||+|||||+||++||..|++.|++|+|||+++.+.......+ . ..+...........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999765432210000 0 00100000000000
Q ss_pred hh--------------cchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCcee------eeccEEEEeCCC
Q 013810 121 AR--------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFK------ISYDKLVIALGA 180 (436)
Q Consensus 121 ~~--------------~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~------~~~d~lViAtG~ 180 (436)
.. .........++.++.+..... +.+.+.+.. .+|.. .. +.||+||+|||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~V~~-~~G~~------~~~~~~~~i~~d~lViAtGs 155 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE--DETKIRVTP-VDGLE------GTVKEDHILDVKNIIVATGS 155 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES--SSSEEEEEC-CTTCT------TCCSSCEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEe-cCCCc------ccccccceEEeCEEEECcCC
Confidence 00 011123346788888765443 445555543 23310 15 899999999999
Q ss_pred CCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhh
Q 013810 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (436)
Q Consensus 181 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~ 260 (436)
.|+ .+||.+.....+.+..++.. +...| ++++|||+|++|+|+|..|++++
T Consensus 156 ~p~--~~~g~~~~~~~v~~~~~~~~----------~~~~~----------~~vvViGgG~~g~e~A~~l~~~g------- 206 (478)
T 1v59_A 156 EVT--PFPGIEIDEEKIVSSTGALS----------LKEIP----------KRLTIIGGGIIGLEMGSVYSRLG------- 206 (478)
T ss_dssp EEC--CCTTCCCCSSSEECHHHHTT----------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT-------
T ss_pred CCC--CCCCCCCCCceEEcHHHHHh----------hhccC----------ceEEEECCCHHHHHHHHHHHHcC-------
Confidence 874 45555311112223332221 12223 49999999999999999999876
Q ss_pred hcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC---C---eEEEc-----CCcEEecceE
Q 013810 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLILN-----DGTEVPYGLL 327 (436)
Q Consensus 261 ~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~---~---~v~~~-----~g~~i~~D~v 327 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. + .+.+. +++++++|.|
T Consensus 207 -------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~v 279 (478)
T 1v59_A 207 -------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVL 279 (478)
T ss_dssp -------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred -------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEE
Confidence 899999995 57788999999999999999999999994 888864 2 34554 3567999999
Q ss_pred EEecCCCCc-h--hcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 328 VWSTGVGPS-T--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 328 i~a~G~~p~-~--~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
|+|+|++|+ + +++.++++++++|+|.||+++| |+.|+|||+|||+.. +++++.|..||+.||+||..
T Consensus 280 v~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 280 LVAVGRRPYIAGLGAEKIGLEVDKRGRLVIDDQFN-SKFPHIKVVGDVTFG---------PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp EECSCEEECCTTSCTTTTTCCBCTTSCBCCCTTSB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCcCCCCCCchhcCceeCCCCCEeECcCCc-cCCCCEEEeeccCCC---------cccHHHHHHHHHHHHHHHcC
Confidence 999999999 4 6788899999899999999999 999999999999986 67899999999999999985
Q ss_pred hc-------CCceeeecchhHHHH
Q 013810 405 LA-------RNWCWFFDVCSLTSI 421 (436)
Q Consensus 405 ~~-------~~~~~~~~~~~~~~~ 421 (436)
.. .+++|+++..+.++|
T Consensus 350 ~~~~~~~~~~p~~~~~~~~~a~vG 373 (478)
T 1v59_A 350 GHGHVNYNNIPSVMYSHPEVAWVG 373 (478)
T ss_dssp SCCCCCTTSCCEEECSSSEEEEEE
T ss_pred CCCCCCCCCCCEEEEcCCcEEEEE
Confidence 32 357777776655554
No 58
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=4.9e-38 Score=314.29 Aligned_cols=306 Identities=19% Similarity=0.219 Sum_probs=219.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhc---------------------------Ccc--
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV---------------------------GTL-- 111 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~---------------------------~~~-- 111 (436)
.++||+|||||+||++||..|++.|++|+|||+++.......+.+.+. +..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999862211111111100 000
Q ss_pred ----cccccc-------cchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCC
Q 013810 112 ----EFRSVA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180 (436)
Q Consensus 112 ----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~ 180 (436)
++.... ..+......+....++.++.+++..++.. .+.+.. .+|. ...+.||+||||||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~~~v~~-~~g~------~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGK--KVEVTA-ADGS------SQVLDTENVILASGS 152 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTT--CEEEEC-TTSC------EEEECCSCEEECCCE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCC--EEEEEc-CCCc------eEEEEcCEEEEcCCC
Confidence 000000 00111111223345788888887776554 344432 2342 127899999999999
Q ss_pred CCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHh
Q 013810 181 EASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ 259 (436)
Q Consensus 181 ~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~ 259 (436)
.|..|+.++.+ ..+++.. +. +.+...| ++++|||+|++|+|+|..|.+++
T Consensus 153 ~p~~~~~~~~~~~~v~~~~---~~----------~~~~~~~----------~~v~ViGgG~~g~e~A~~l~~~g------ 203 (476)
T 3lad_A 153 KPVEIPPAPVDQDVIVDST---GA----------LDFQNVP----------GKLGVIGAGVIGLELGSVWARLG------ 203 (476)
T ss_dssp EECCCTTSCCCSSSEEEHH---HH----------TSCSSCC----------SEEEEECCSHHHHHHHHHHHHTT------
T ss_pred CCCCCCCCCCCcccEEech---hh----------hccccCC----------CeEEEECCCHHHHHHHHHHHHcC------
Confidence 98877665543 3333321 11 1122233 49999999999999999999876
Q ss_pred hhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEcCC---cEEecceEEEe
Q 013810 260 RYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDG---TEVPYGLLVWS 330 (436)
Q Consensus 260 ~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~g---~~i~~D~vi~a 330 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .+.+.++ +++++|.|++|
T Consensus 204 --------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a 275 (476)
T 3lad_A 204 --------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVA 275 (476)
T ss_dssp --------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEEC
T ss_pred --------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEe
Confidence 899999995 57888999999999999999999999994 8888632 3556654 67999999999
Q ss_pred cCCCCc-h--hcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc-
Q 013810 331 TGVGPS-T--LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA- 406 (436)
Q Consensus 331 ~G~~p~-~--~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~- 406 (436)
+|++|+ + .++..+++++++|+|.||+++| |+.|+|||+|||+.. +.++..|..||+.||+||....
T Consensus 276 ~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~~~ 345 (476)
T 3lad_A 276 VGRRPVTTDLLAADSGVTLDERGFIYVDDYCA-TSVPGVYAIGDVVRG---------AMLAHKASEEGVVVAERIAGHKA 345 (476)
T ss_dssp SCEEECCTTCCSSCCSCCBCTTSCBCCCTTSB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHHHCCC
T ss_pred eCCcccCCCCCccccCccccCCCCEeeCCCcc-cCCCCEEEEEccCCC---------cccHHHHHHHHHHHHHHhcCCCc
Confidence 999998 3 2778899999999999999999 999999999999975 7799999999999999998533
Q ss_pred ------CCceeeecchhHHHHH
Q 013810 407 ------RNWCWFFDVCSLTSIL 422 (436)
Q Consensus 407 ------~~~~~~~~~~~~~~~~ 422 (436)
.+++.+++..+..+++
T Consensus 346 ~~~~~~~p~~~~~~~~~a~vGl 367 (476)
T 3lad_A 346 QMNYDLIPAVIYTHPEIAGVGK 367 (476)
T ss_dssp CCCTTCCCEEECSSSEEEEEEC
T ss_pred ccCCCCCCEEEECcCCEEEeeC
Confidence 2455555555554443
No 59
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=3.8e-37 Score=290.80 Aligned_cols=283 Identities=16% Similarity=0.108 Sum_probs=203.5
Q ss_pred CcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCcceecchhhhh---hcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVFTPLLAST---CVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
+||+|||||+||++||..|++.|+ +|+|||++.. ......... ..+..... ....+...........++.++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP-GGQITGSSEIENYPGVKEVV-SGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST-TCGGGGCSCBCCSTTCCSCB-CHHHHHHHHHHHHHTTSCEEECS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC-CcccccccccccCCCCcccC-CHHHHHHHHHHHHHHcCCEEEEE
Confidence 689999999999999999999999 9999999632 111000000 00100000 01122222223344567888778
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhcc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLM 215 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 215 (436)
+|+.++.+.+.+.+.. .++. .+.||+||+|||+.|+.|++||.+. ..++.... . ....
T Consensus 80 ~v~~i~~~~~~~~v~~-~~g~--------~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~--~---~~~~----- 140 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILA-EDGK--------TFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCAT--C---DGFF----- 140 (311)
T ss_dssp CEEEEEEETTEEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHH--H---HGGG-----
T ss_pred EEEEEEEcCCEEEEEE-cCCC--------EEECCEEEECCCCCCCCCCCCChhhccCCcEEEeec--C---Chhh-----
Confidence 8999987777555532 3554 7999999999999999999998642 11211111 1 0000
Q ss_pred ccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHH
Q 013810 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (436)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~ 295 (436)
...++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++. +.+.+.
T Consensus 141 ------------~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~ 189 (311)
T 2q0l_A 141 ------------YKNKEVAVLGGGDTAVEEAIYLANIC--------------KKVYLIHRRDGFR-CAPI----TLEHAK 189 (311)
T ss_dssp ------------GTTSEEEEECCSHHHHHHHHHHHTTS--------------SEEEEECSSSSCC-SCHH----HHHHHH
T ss_pred ------------cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeeCCccC-CCHH----HHHHHh
Confidence 22359999999999999999998765 8999999965443 3333 333444
Q ss_pred -hcCCEEEecc-eEEEeCC-----eEEEc---CCc--EEecceEEEecCCCCc-hhcccCC----CCCCCCCcEEeCCCC
Q 013810 296 -KSGVRLVRGI-VKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLD----LPKSPGGRIGIDEWL 358 (436)
Q Consensus 296 -~~gV~i~~~~-v~~i~~~-----~v~~~---~g~--~i~~D~vi~a~G~~p~-~~~~~~~----l~~~~~G~i~vd~~~ 358 (436)
+.||+++.+. +.+++.+ .|++. +|+ ++++|.||+|+|++|+ ++++.++ ++++++|+|.||+++
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~ 269 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSM 269 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTC
T ss_pred hCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCcc
Confidence 4799999984 8888643 46665 675 6999999999999999 6887775 888889999999999
Q ss_pred CCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 359 ~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
| |+.|+|||+|||+..+ ++++..|+.||+.||.||....
T Consensus 270 ~-t~~~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 270 K-TNVQGLFAAGDIRIFA--------PKQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp B-CSSTTEEECSTTBTTC--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCCCCeEEcccccCcc--------hHHHHHHHHhHHHHHHHHHHHH
Confidence 9 8999999999999852 6789999999999999998654
No 60
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.9e-37 Score=294.12 Aligned_cols=289 Identities=18% Similarity=0.154 Sum_probs=208.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCccccc-c-cccchhhcchhhhcCCCcEEEEeE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR-S-VAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
++||+|||||+||++||..|++.|++|+|||+.. ..............+... . ....+...........++.++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 4799999999999999999999999999999752 111100000000000000 0 001122222223445678888888
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhccc
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
|+.++.+.+.+.+ ..++. .+.||+||+|||+.|..|++||.+. ..++. ... ....+
T Consensus 84 v~~i~~~~~~~~v--~~~~~--------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~--~~~---~~~~~------ 142 (320)
T 1trb_A 84 INKVDLQNRPFRL--NGDNG--------EYTCDALIIATGASARYLGLPSEEAFKGRGVSA--CAT---SDGFF------ 142 (320)
T ss_dssp EEEEECSSSSEEE--EESSC--------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEES--CHH---HHGGG------
T ss_pred eeEEEecCCEEEE--EeCCC--------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEe--ccc---CCccc------
Confidence 9999987776665 23555 7999999999999999888888642 11111 111 11110
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHh
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~ 296 (436)
..+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++.+.+.+.+.+++
T Consensus 143 -----------~~~~~v~ViG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~~~~l~~~l~~ 196 (320)
T 1trb_A 143 -----------YRNQKVAVIGGGNTAVEEALYLSNIA--------------SEVHLIHRRDGFR-AEKILIKRLMDKVEN 196 (320)
T ss_dssp -----------GTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC-CCHHHHHHHHHHHHT
T ss_pred -----------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCccc-cCHHHHHHHHHhccc
Confidence 22358999999999999999998765 8999999965432 356777888888999
Q ss_pred cCCEEEecc-eEEEeCCe-----EEEcC----C--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCC----C
Q 013810 297 SGVRLVRGI-VKDVDSQK-----LILND----G--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWL----R 359 (436)
Q Consensus 297 ~gV~i~~~~-v~~i~~~~-----v~~~~----g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~----~ 359 (436)
.||+++.+. +.+++.+. |++.+ | +++++|.||+|+|++|+ ++++ .+++++ +|+|.||+++ +
T Consensus 197 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~-~G~i~vd~~~~~~~~ 274 (320)
T 1trb_A 197 GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE-NGYIKVQSGIHGNAT 274 (320)
T ss_dssp SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE-TTEECCCCSSSSCTT
T ss_pred CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-cccccc-CceEEECCCcccccc
Confidence 999999984 88886543 77764 4 57999999999999999 4555 567778 8999999997 2
Q ss_pred CCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcCC
Q 013810 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLARN 408 (436)
Q Consensus 360 ~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 408 (436)
.|+.|+|||+|||+..+ ++.+..|+.||+.||.+|..+..+
T Consensus 275 ~t~~~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 275 QTSIPGVFAAGDVMDHI--------YRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp BCSSTTEEECGGGGCSS--------SCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEcccccCCc--------chhhhhhhccHHHHHHHHHHHHHh
Confidence 38999999999999852 578999999999999999876543
No 61
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.2e-37 Score=308.24 Aligned_cols=282 Identities=19% Similarity=0.269 Sum_probs=212.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh---------------h---h--cCc------ccccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS---------------T---C--VGT------LEFRS 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~---------------~---~--~~~------~~~~~ 115 (436)
++||+|||||+||++||..|++.|++|+|||+. .++......+ . . .+. .++..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 479999999999999999999999999999994 3222100000 0 0 000 00000
Q ss_pred cc-------cchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCC-CCCC
Q 013810 116 VA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFGI 187 (436)
Q Consensus 116 ~~-------~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~-~~~i 187 (436)
+. ..+...........++.++.+++..++. +.+.+. .++. .+.||+||+|||+.|. .|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~~--~~~~--------~~~~d~lviAtG~~p~~~p~i 151 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGP--NTVKLL--ASGK--------TVTAERIVIAVGGHPSPHDAL 151 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSS--SEEEET--TTTE--------EEEEEEEEECCCEEECCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEe--cCCe--------EEEeCEEEEecCCCcccCCCC
Confidence 00 0111111122334578888887776653 455442 2444 7999999999999999 9999
Q ss_pred CCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013810 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (436)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~ 267 (436)
||.+ .++ +..+.. .+...| ++++|||+|++|+|+|..+.+++
T Consensus 152 ~G~~-~~~---~~~~~~----------~~~~~~----------~~v~ViGgG~~g~e~A~~l~~~g-------------- 193 (463)
T 4dna_A 152 PGHE-LCI---TSNEAF----------DLPALP----------ESILIAGGGYIAVEFANIFHGLG-------------- 193 (463)
T ss_dssp TTGG-GCB---CHHHHT----------TCSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-ccc---cHHHHh----------hhhcCC----------CeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 9874 222 222211 122223 49999999999999999999876
Q ss_pred cEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-----eEE-EcCCcEEecceEEEecCCCCch-h
Q 013810 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLI-LNDGTEVPYGLLVWSTGVGPST-L 338 (436)
Q Consensus 268 ~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-----~v~-~~~g~~i~~D~vi~a~G~~p~~-~ 338 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|. +.+|+ +++|.||+|+|++|+. +
T Consensus 194 ~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 194 VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 899999995 57788999999999999999999999984 8888642 467 77887 9999999999999994 4
Q ss_pred --cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 339 --VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 339 --~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
++.+|++++++|+|.||+++| |+.|+|||+|||++. +++++.|..||+.||+||...
T Consensus 273 l~l~~~g~~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 273 LGLEAAGVRTNELGAIIVDAFSR-TSTPGIYALGDVTDR---------VQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp SSTGGGTCCBCTTSCBCCCTTCB-CSSTTEEECSGGGSS---------CCCHHHHHHHHHHHHHHHHSS
T ss_pred CCccccCceECCCCCEeECcCCC-CCCCCEEEEEecCCC---------CCChHHHHHHHHHHHHHHcCC
Confidence 788899999999999999999 999999999999985 789999999999999999853
No 62
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2.1e-37 Score=292.93 Aligned_cols=285 Identities=14% Similarity=0.107 Sum_probs=203.6
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEE-EcCCCcceecchhhhh---hcCcccccccccchhhcchhhhcCCCcEEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRNHMVFTPLLAST---CVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~l-ie~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (436)
.++||+|||||+|||+||..|++.|++|+| ||+. .+......... ..+.... .....+...........++.++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQV-MDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSC-BCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCC-CCHHHHHHHHHHHHHHcCcEEE
Confidence 357999999999999999999999999999 9994 32221110000 0111100 0111223333334556788888
Q ss_pred EeEeEeEeCCC--CEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHH
Q 013810 137 LSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLL 211 (436)
Q Consensus 137 ~~~v~~id~~~--~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~ 211 (436)
.++|+.+ .+. +.+.+. ...+. .+.||+||+|||+.|+.|++||.+. ..++..... ...
T Consensus 81 ~~~v~~i-~~~~~~~~~v~-~~~~~--------~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~-- 143 (315)
T 3r9u_A 81 MVGVEQI-LKNSDGSFTIK-LEGGK--------TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATC-----DGF-- 143 (315)
T ss_dssp CCCEEEE-EECTTSCEEEE-ETTSC--------EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH-----HGG--
T ss_pred EEEEEEE-ecCCCCcEEEE-EecCC--------EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecc-----ccc--
Confidence 8888888 444 455521 11232 6899999999999999999999753 222221111 110
Q ss_pred HhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHH
Q 013810 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (436)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~ 291 (436)
...+++++|||+|++|+|+|..|.+.+ .+|+++++.+.+.. ++. .+.
T Consensus 144 ---------------~~~~~~v~viG~g~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~-~~~---~~~ 190 (315)
T 3r9u_A 144 ---------------FYKNKEVAVLGGGDTALEEALYLANIC--------------SKIYLIHRRDEFRA-APS---TVE 190 (315)
T ss_dssp ---------------GGTTSEEEEECCBHHHHHHHHHHHTTS--------------SEEEEECSSSSCBS-CHH---HHH
T ss_pred ---------------ccCcCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCCCCCC-CHH---HHH
Confidence 022358999999999999999998765 89999999754432 332 344
Q ss_pred HHHHhcCCEEEecc-eEEEeCC-----eEEEc--CCc--EEecceEEEecCCCCc-hhccc---CC-CCCCCCCcEEeCC
Q 013810 292 TQLSKSGVRLVRGI-VKDVDSQ-----KLILN--DGT--EVPYGLLVWSTGVGPS-TLVKS---LD-LPKSPGGRIGIDE 356 (436)
Q Consensus 292 ~~l~~~gV~i~~~~-v~~i~~~-----~v~~~--~g~--~i~~D~vi~a~G~~p~-~~~~~---~~-l~~~~~G~i~vd~ 356 (436)
+.+++.||+++.+. +.+++.+ .|++. +|+ ++++|.|++|+|++|+ .++.. ++ ++++++|+|.||+
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~ 270 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDL 270 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCT
T ss_pred HHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCC
Confidence 55678899999884 8888653 26665 775 7999999999999999 45554 54 8889999999999
Q ss_pred CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 357 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 357 ~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
++| |+.|+|||+|||+..+ ++.+..|+.||+.||.+|....
T Consensus 271 ~~~-t~~~~v~a~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 271 KMQ-TSVAGLFAAGDLRKDA--------PKQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp TCB-CSSTTEEECGGGBTTC--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-cCCCCEEEeecccCCc--------hhhhhhHHhhHHHHHHHHHHHH
Confidence 999 8999999999998642 7899999999999999998654
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-37 Score=293.62 Aligned_cols=291 Identities=14% Similarity=0.168 Sum_probs=210.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh--hhh-hcCcccccc-cccchhhcchhhhcCCCcEEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL--AST-CVGTLEFRS-VAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~--~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 136 (436)
.++||+|||||+||+++|..|++.|++|+|||+++.+.+.... +.. ......... ....+...........++.++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 3579999999999999999999999999999998765432110 000 000000000 001111111222333456665
Q ss_pred E-eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCC---CCCCCCCCCCccc----ccc-ccChHHHHHHH
Q 013810 137 L-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKEN----ATF-LREVHHAQEIR 207 (436)
Q Consensus 137 ~-~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~---~~~~~~i~g~~~~----~~~-~~~~~~~~~~~ 207 (436)
. .+|+.++.+.+.+.+.. .++. .+.||+||+|||+ .|..|+++|.+.. +.. ..+..
T Consensus 84 ~~~~v~~i~~~~~~~~v~~-~~g~--------~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~------ 148 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTT-SQGN--------AYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKA------ 148 (335)
T ss_dssp ESCCEEEEEEETTEEEEEE-TTSC--------EEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGG------
T ss_pred eCCEEEEEEECCCEEEEEE-CCCC--------EEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchh------
Confidence 4 48888887665555543 3454 7899999999999 5777788886421 111 11111
Q ss_pred HHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHH
Q 013810 208 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287 (436)
Q Consensus 208 ~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~ 287 (436)
...+++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. .+...
T Consensus 149 -------------------~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~-~~~~~ 194 (335)
T 2zbw_A 149 -------------------EFQGKRVLIVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRA-HEASV 194 (335)
T ss_dssp -------------------GGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCS-CHHHH
T ss_pred -------------------hcCCCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCc-cHHHH
Confidence 012358999999999999999998655 89999999654332 25667
Q ss_pred HHHHHHHHhcCCEEEec-ceEEEeCC----eEEEc---CC--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCC
Q 013810 288 HYATTQLSKSGVRLVRG-IVKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDE 356 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~-~v~~i~~~----~v~~~---~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~ 356 (436)
+.+.+.+++.||+++.+ .|.+++.+ .|.+. +| +++++|.||+|+|++|+ ++++.++++.+ +|+|.||+
T Consensus 195 ~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~vd~ 273 (335)
T 2zbw_A 195 KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE-KNKIKVDT 273 (335)
T ss_dssp HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE-TTEEECCT
T ss_pred HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc-CCeeeeCC
Confidence 77888889999999999 48888754 57776 77 57999999999999998 68888888877 78999999
Q ss_pred CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcCC
Q 013810 357 WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLARN 408 (436)
Q Consensus 357 ~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 408 (436)
++| |+.|+|||+|||+..+. .++++..|+.||+.||+||.....+
T Consensus 274 ~~~-t~~~~vya~GD~~~~~~------~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 274 TMA-TSIPGVYACGDIVTYPG------KLPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp TCB-CSSTTEEECSTTEECTT------CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCC-CCCCCEEEeccccccCc------chhhhhhhHHHHHHHHHHHHHHhhh
Confidence 999 89999999999997532 1678999999999999999876543
No 64
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=6e-37 Score=306.75 Aligned_cols=300 Identities=22% Similarity=0.285 Sum_probs=221.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh--------------------hcCc------cccc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST--------------------CVGT------LEFR 114 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~--------------------~~~~------~~~~ 114 (436)
.++||+|||||+||++||..|++.|++|+|||+. .++......+. ..+. .++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 103 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWE 103 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 3589999999999999999999999999999994 32221000000 0000 0000
Q ss_pred cc-------ccchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCC-CCC
Q 013810 115 SV-------AEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFG 186 (436)
Q Consensus 115 ~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~-~~~ 186 (436)
.+ ...+...........++.++.+.+..++. +.+.+. .++. .+.||+||||||+.|. .|+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~--~~~~--------~~~~d~lviAtG~~p~~~p~ 171 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELS--VTGE--------RISAEKILIATGAKIVSNSA 171 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET--TTCC--------EEEEEEEEECCCEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEe--cCCe--------EEEeCEEEEccCCCcccCCC
Confidence 00 00111111222344688898888887774 345442 1344 7999999999999999 899
Q ss_pred CCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 013810 187 IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (436)
Q Consensus 187 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~ 266 (436)
+||.+ .+++..++.. +...| ++++|||+|++|+|+|..+.+++
T Consensus 172 i~G~~-~~~~~~~~~~-------------~~~~~----------~~v~ViGgG~~g~e~A~~l~~~g------------- 214 (484)
T 3o0h_A 172 IKGSD-LCLTSNEIFD-------------LEKLP----------KSIVIVGGGYIGVEFANIFHGLG------------- 214 (484)
T ss_dssp CBTGG-GSBCTTTGGG-------------CSSCC----------SEEEEECCSHHHHHHHHHHHHTT-------------
T ss_pred CCCcc-ccccHHHHHh-------------HHhcC----------CcEEEECcCHHHHHHHHHHHHcC-------------
Confidence 99874 3333333221 12223 49999999999999999999876
Q ss_pred ccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEcCCcEEecceEEEecCCCCch-h-
Q 013810 267 YIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPST-L- 338 (436)
Q Consensus 267 ~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~~-~- 338 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .|.+.+|+++++|.||+|+|++|+. +
T Consensus 215 -~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l 293 (484)
T 3o0h_A 215 -VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGL 293 (484)
T ss_dssp -CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTC
T ss_pred -CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCC
Confidence 899999995 57888999999999999999999999984 8888653 4778899899999999999999994 4
Q ss_pred -cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc--------CCc
Q 013810 339 -VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA--------RNW 409 (436)
Q Consensus 339 -~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~--------~~~ 409 (436)
++..+++++++|+|.||+++| |+.|+|||+|||++. ++++..|..||+.||+||+... .++
T Consensus 294 ~l~~~g~~~~~~G~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~ 363 (484)
T 3o0h_A 294 GLERAGVKVNEFGAVVVDEKMT-TNVSHIWAVGDVTGH---------IQLTPVAIHDAMCFVKNAFENTSTTPDYDLITT 363 (484)
T ss_dssp CHHHHTCCBCTTSCBCCCTTSB-CSSTTEEECGGGGTS---------CCCHHHHHHHHHHHHHHHHC---CCCCCTTCCE
T ss_pred ChhhcCceECCCCCEeECCCCC-CCCCCEEEEEecCCC---------CcCHHHHHHHHHHHHHHHcCCCCCcCCCCCCcE
Confidence 677899999999999999999 999999999999985 7899999999999999998532 234
Q ss_pred eeeecchhHHHH
Q 013810 410 CWFFDVCSLTSI 421 (436)
Q Consensus 410 ~~~~~~~~~~~~ 421 (436)
+.+.+..+..++
T Consensus 364 ~~~~~p~~a~vG 375 (484)
T 3o0h_A 364 AVFSQPEIGTVG 375 (484)
T ss_dssp EECCSSCEEEEE
T ss_pred EEECCCCEEEee
Confidence 444445544444
No 65
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=8.9e-37 Score=303.34 Aligned_cols=283 Identities=20% Similarity=0.209 Sum_probs=211.3
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhh-------------------hcCcc------cccccc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAST-------------------CVGTL------EFRSVA 117 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~-------------------~~~~~------~~~~~~ 117 (436)
+||+||||||||++||..|++.|++|+|||+++.++......+. ..+.. +...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 68999999999999999999999999999998654322110000 00100 000000
Q ss_pred cc-------hhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCC
Q 013810 118 EP-------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 190 (436)
Q Consensus 118 ~~-------~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~ 190 (436)
.. +...........++.++.+++..++ .+.+.+.. ++. ++.||+||||||++|..|+++|.
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~--~~~~~v~~--~g~--------~~~~d~lviAtG~~p~~~~~~g~ 149 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIARHQGTARFLS--ERKVLVEE--TGE--------ELEARYILIATGSAPLIPPWAQV 149 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEETT--TCC--------EEEEEEEEECCCEEECCCTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCeEEEee--CCE--------EEEecEEEECCCCCCCCCCCCCC
Confidence 00 0000112233457888887766554 34555532 344 79999999999999999998886
Q ss_pred cc-ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE
Q 013810 191 KE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (436)
Q Consensus 191 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~ 269 (436)
+. .+++. .++. .+...| ++++|||+|++|+|+|..|++.+ .+
T Consensus 150 ~~~~v~~~---~~~~----------~~~~~~----------~~vvIiGgG~~g~e~A~~l~~~g--------------~~ 192 (455)
T 2yqu_A 150 DYERVVTS---TEAL----------SFPEVP----------KRLIVVGGGVIGLELGVVWHRLG--------------AE 192 (455)
T ss_dssp CSSSEECH---HHHT----------CCSSCC----------SEEEEECCSHHHHHHHHHHHHTT--------------CE
T ss_pred CcCcEech---HHhh----------ccccCC----------CeEEEECCCHHHHHHHHHHHHcC--------------CE
Confidence 53 33322 2211 122223 48999999999999999998876 89
Q ss_pred EEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEec-ceEEEeC--Ce--EEEcCCcEEecceEEEecCCCCc-hh--cc
Q 013810 270 VTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPS-TL--VK 340 (436)
Q Consensus 270 V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~--v~~~~g~~i~~D~vi~a~G~~p~-~~--~~ 340 (436)
|+++++. .+++.+++++.+.+.+.+++.||+++.+ +|++++. +. +.+++|+++++|.||+|+|.+|+ ++ ++
T Consensus 193 V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~ 272 (455)
T 2yqu_A 193 VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLE 272 (455)
T ss_dssp EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGG
T ss_pred EEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChh
Confidence 9999995 5678889999999999999999999998 4888864 33 44568889999999999999999 44 67
Q ss_pred cCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 341 SLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 341 ~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
.++++++++|+|.||+++| |+.|+|||+|||+.. ++++..|..||+.||+||..
T Consensus 273 ~~g~~~~~~g~i~vd~~~~-t~~~~iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 273 NAGLSTDERGRIPVDEHLR-TRVPHIYAIGDVVRG---------PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp GGTCCCCTTSCCCCCTTSB-CSSTTEEECGGGSSS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCccCCCCcEeECCCcc-cCCCCEEEEecCCCC---------ccCHHHHHHhHHHHHHHHcC
Confidence 7889888889999999999 899999999999986 77899999999999999975
No 66
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=7.6e-37 Score=291.22 Aligned_cols=287 Identities=13% Similarity=0.145 Sum_probs=209.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch--hhhh-hcCcccccc-cccchhhcchhhhcCCCcEEEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LAST-CVGTLEFRS-VAEPIARIQPAISREPGSYFFL 137 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (436)
++||+|||||+||++||..|++.|++|+|||+++.+..... .+.. ......... ....+...........++.++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 47999999999999999999999999999999886543211 0000 000000000 0112223333334455788775
Q ss_pred -eEeEeEeCCCC-EEEEEEecCCcccCCCCceeeeccEEEEeCCC---CCCCCCCCCCcc---ccccccChHHHHHHHHH
Q 013810 138 -SHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKE---NATFLREVHHAQEIRRK 209 (436)
Q Consensus 138 -~~v~~id~~~~-~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~---~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~ 209 (436)
.+|+.++...+ .+.+.. .++ ++.||+||+|||+ .|+.|++||.+. ..++. .+.+...
T Consensus 87 ~~~v~~i~~~~~~~~~v~~-~~g---------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~---- 151 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVT-NEE---------THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQK---- 151 (332)
T ss_dssp SCCEEEEEECTTSCEEEEE-SSE---------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGG----
T ss_pred cCEEEEEEECCCCcEEEEE-CCC---------EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHH----
Confidence 68999988766 444432 233 6899999999999 888889998753 12222 2221111
Q ss_pred HHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHH
Q 013810 210 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY 289 (436)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~ 289 (436)
..+++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+...++.
T Consensus 152 ------------------~~~~~v~vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~~~~---- 195 (332)
T 3lzw_A 152 ------------------FAGRRVAILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAHEHS---- 195 (332)
T ss_dssp ------------------GBTCEEEEECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSCHHH----
T ss_pred ------------------cCCCEEEEECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCccHHH----
Confidence 22358999999999999999998755 899999997655443332
Q ss_pred HHHHHHhcCCEEEecc-eEEEeCC----eEEEcC-----CcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCC
Q 013810 290 ATTQLSKSGVRLVRGI-VKDVDSQ----KLILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWL 358 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~-----g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~ 358 (436)
.+.+++.||+++.+. +.+++.+ .|++.+ ++++++|.||+|+|++|+ ++++.++++. ++|+|.||+++
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~-~~g~i~vd~~~ 273 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI-EKNSIVVKSTM 273 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE-ETTEEECCTTS
T ss_pred -HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc-cCCeEEeCCCC
Confidence 234788999999984 8888764 377765 457999999999999998 6888889888 68999999999
Q ss_pred CCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcCC
Q 013810 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLARN 408 (436)
Q Consensus 359 ~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 408 (436)
| |+.|+|||+|||+..+. .++++..|+.||+.||.+|.....+
T Consensus 274 ~-t~~~~vya~GD~~~~~~------~~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 274 E-TNIEGFFAAGDICTYEG------KVNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp B-CSSTTEEECGGGEECTT------CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred c-eecCCEEEccceecCCC------CcceEeeehhhHHHHHHHHHHhhCh
Confidence 9 89999999999996421 2789999999999999999876654
No 67
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4e-36 Score=283.68 Aligned_cols=284 Identities=18% Similarity=0.177 Sum_probs=200.0
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec--chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-E
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (436)
+||+||||||||++||..|++.|++|+|||+...-.+. ..+.... +.. .. ....+...........++.++.+ +
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYI-SVP-KT-EGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBT-TBS-SE-EHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceecccccccccc-CcC-CC-CHHHHHHHHHHHHHHcCCeEEccCE
Confidence 68999999999999999999999999999864210000 0000000 000 00 01122222233344568888887 8
Q ss_pred eEeEeCCCC---EEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccc
Q 013810 140 CAGIDTDNH---VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML 216 (436)
Q Consensus 140 v~~id~~~~---~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (436)
|+.++.+.. .+.+.. .++. .+.||+||+|||+.|..|++||.++.. ...+.....+...
T Consensus 79 v~~i~~~~~~~~~~~v~~-~~g~--------~~~~~~lv~AtG~~~~~~~~~g~~~~~--~~~~~~~~~~~~~------- 140 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIET-ASGA--------VLKARSIIVATGAKWRNMNVPGEDQYR--TKGVTYCPHCDGP------- 140 (310)
T ss_dssp EEEEECCSSTTCCEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCTTTTTTB--TTTEESCHHHHGG-------
T ss_pred EEEEEecccCCceEEEEE-CCCC--------EEEeCEEEECcCCCcCCCCCCChhhcc--cceeEEeccCcHh-------
Confidence 999986532 344432 3554 789999999999999888999875311 0111111111111
Q ss_pred cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHh
Q 013810 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (436)
Q Consensus 217 ~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~ 296 (436)
...+++|+|||+|++|+|+|..|++.+ .+|+++++.+.+. +++ .+.+.+++
T Consensus 141 ----------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~----~~~~~l~~ 191 (310)
T 1fl2_A 141 ----------LFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMK-ADQ----VLQDKLRS 191 (310)
T ss_dssp ----------GGBTCEEEEECCSHHHHHHHHHHHTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHT
T ss_pred ----------hcCCCEEEEECCCHHHHHHHHHHHHhC--------------CEEEEEEeCcccC-ccH----HHHHHHhh
Confidence 023459999999999999999998765 8999999965442 333 34456666
Q ss_pred -cCCEEEec-ceEEEeCC-----eEEEcC---Cc--EEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCC
Q 013810 297 -SGVRLVRG-IVKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSV 363 (436)
Q Consensus 297 -~gV~i~~~-~v~~i~~~-----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~ 363 (436)
.||+++.+ ++.+++.+ .|++.+ |+ ++++|.|++|+|++|+ +++... ++++++|+|.||+++| |+.
T Consensus 192 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g~i~vd~~~~-t~~ 269 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMGEIIIDAKCE-TNV 269 (310)
T ss_dssp CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTSCBCCCTTCB-CSS
T ss_pred CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCCcEEcCCCCc-cCC
Confidence 69999998 48888653 466653 53 6899999999999998 577653 7788889999999999 999
Q ss_pred CCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 364 QDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 364 ~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
|+|||+|||+..+ ++.+..|+.||+.||.+|....
T Consensus 270 ~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 270 KGVFAAGDCTTVP--------YKQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp TTEEECSTTBSCS--------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCc--------chhhhhhHhhHHHHHHHHHHHH
Confidence 9999999999862 4688999999999999998754
No 68
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5e-36 Score=297.85 Aligned_cols=278 Identities=23% Similarity=0.300 Sum_probs=206.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch----hh-----------hhh--------cCccccccccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------STC--------VGTLEFRSVAE 118 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~----~~-----------~~~--------~~~~~~~~~~~ 118 (436)
++||+|||||+||++||..|++.|++|+|||++ .++.... .+ ... .|.. ......
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~-~~~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGIS-VASPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCC-CCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcc-cCCCcc
Confidence 479999999999999999999999999999994 3321100 00 000 1110 000000
Q ss_pred chhhc--------------chhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 119 PIARI--------------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 119 ~~~~~--------------~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
+...+ ...+.+..++.++.+++..++ .+.+.+. + . ++.||+||||||++|+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~---~-~--------~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQVEVD---G-Q--------RIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTEEEET---T-E--------EEECSEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCEEEEe---e-E--------EEEeCEEEEeCCCCCCC
Confidence 11100 112334568888888766665 3556542 2 3 79999999999999987
Q ss_pred CC-CCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcC
Q 013810 185 FG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (436)
Q Consensus 185 ~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~ 263 (436)
|+ +| .+..++ +..++. .+... +++++|||+|++|+|+|..|++.+
T Consensus 149 ~~~~~-~~~~v~---~~~~~~----------~~~~~----------~~~vvViGgG~~g~e~A~~l~~~g---------- 194 (458)
T 1lvl_A 149 LPMLP-LGGPVI---SSTEAL----------APKAL----------PQHLVVVGGGYIGLELGIAYRKLG---------- 194 (458)
T ss_dssp BTTBC-CBTTEE---CHHHHT----------CCSSC----------CSEEEEECCSHHHHHHHHHHHHHT----------
T ss_pred CCCCC-ccCcEe---cHHHHh----------hhhcc----------CCeEEEECcCHHHHHHHHHHHHCC----------
Confidence 76 55 222222 222221 11222 349999999999999999999877
Q ss_pred CCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEec-ceEEEeCCeEEEc--CC--cEEecceEEEecCCCCc-
Q 013810 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DG--TEVPYGLLVWSTGVGPS- 336 (436)
Q Consensus 264 ~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~~~v~~~--~g--~~i~~D~vi~a~G~~p~- 336 (436)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+ +|.+++.+.+.+. +| +++++|.|++|+|++|+
T Consensus 195 ----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 195 ----AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ----CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ----CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 899999995 5778889999999999999999999999 4888876445554 56 68999999999999999
Q ss_pred hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 337 TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 337 ~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
++ ++.++++++++ +|.||+++| |+.|+|||+|||+.. ++++..|..||+.||+||..
T Consensus 271 ~~l~~~~~g~~~~~~-~i~vd~~~~-t~~~~Iya~GD~~~~---------~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 271 KGFNLECLDLKMNGA-AIAIDERCQ-TSMHNVWAIGDVAGE---------PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp SSSSGGGSCCCEETT-EECCCTTCB-CSSTTEEECGGGGCS---------SCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCcHhcCCcccCC-EEeECCCCc-CCCCCEEEeeccCCC---------cccHHHHHHHHHHHHHHhcC
Confidence 43 57888888777 899999999 999999999999986 67899999999999999985
No 69
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=3.2e-36 Score=290.49 Aligned_cols=291 Identities=14% Similarity=0.162 Sum_probs=208.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch--hhhh-hcCcccccc-cccchhhcchhhhcCCCcEEE
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LAST-CVGTLEFRS-VAEPIARIQPAISREPGSYFF 136 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 136 (436)
.++||+|||||+||++||..|++.|++|+|||+.+.+..... .+.. ......... ....+.+.........++.++
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 357999999999999999999999999999999876543211 0000 000000000 001122222222334567765
Q ss_pred E-eEeEeEeCCCC-EEEEEEecCCcccCCCCceeeeccEEEEeCCC---CCCCCCCCC-Cccc----ccc-ccChHHHHH
Q 013810 137 L-SHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHG-VKEN----ATF-LREVHHAQE 205 (436)
Q Consensus 137 ~-~~v~~id~~~~-~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~---~~~~~~i~g-~~~~----~~~-~~~~~~~~~ 205 (436)
. .+|+.++...+ .+.+.. .++. .+.||+||+|||+ .|..+++|| .+.. +.+ ..+..+
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~-~~g~--------~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~--- 160 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRT-NTGN--------VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVED--- 160 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEE-TTSC--------EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGG---
T ss_pred cCCEEEEEEECCCceEEEEE-CCCc--------EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHH---
Confidence 5 48888887654 444433 3554 7999999999999 566677777 4321 111 111110
Q ss_pred HHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHH
Q 013810 206 IRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 285 (436)
Q Consensus 206 ~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~ 285 (436)
..+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+... +.
T Consensus 161 ----------------------~~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~-~~ 203 (360)
T 3ab1_A 161 ----------------------FKGKRVVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQGH-GK 203 (360)
T ss_dssp ----------------------GTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSSC-SH
T ss_pred ----------------------cCCCcEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCCC-HH
Confidence 12358999999999999999998655 899999996544333 35
Q ss_pred HHHHHHHHHHhcCCEEEec-ceEEEeCC-----eEEEc--CC--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEe
Q 013810 286 LRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN--DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGI 354 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~-~v~~i~~~-----~v~~~--~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~v 354 (436)
..+.+.+.+++.||+++.+ .+.+++.+ .|.+. +| +++++|.||+|+|+.|+ ++++.++++++ +|+|.|
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~-~g~i~v 282 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY-ENALVV 282 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE-TTEEEC
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc-cCeeee
Confidence 5667778888899999999 58888643 56664 77 57999999999999999 58888888877 789999
Q ss_pred CCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcCC
Q 013810 355 DEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLARN 408 (436)
Q Consensus 355 d~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 408 (436)
|+++| |+.|+|||+|||+..+. .++++..|+.||..||++|.....+
T Consensus 283 d~~~~-t~~~~vya~GD~~~~~~------~~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 283 DSHMK-TSVDGLYAAGDIAYYPG------KLKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp CTTSB-CSSTTEEECSTTEECTT------CCCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCCc-CCCCCEEEecCccCCCC------ccceeehhHHHHHHHHHHHHhhcCC
Confidence 99999 89999999999997532 2678999999999999999876554
No 70
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=1.2e-36 Score=312.40 Aligned_cols=306 Identities=16% Similarity=0.208 Sum_probs=214.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCC-Cc-------ceecch----hhhh-----------h-----cCcc-
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NH-------MVFTPL----LAST-----------C-----VGTL- 111 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~-~~-------~~~~~~----~~~~-----------~-----~~~~- 111 (436)
.++||+||||||||++||.+|++.|++|+|||+. +. +..... ++.. . .|..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 4589999999999999999999999999999973 21 111000 0000 0 0000
Q ss_pred -------cccccccchhhcc-------hhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEe
Q 013810 112 -------EFRSVAEPIARIQ-------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIA 177 (436)
Q Consensus 112 -------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViA 177 (436)
++..+...+.... .......++.++.+.+..++.. .+.+.. .+|. +.++.||+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~--~v~v~~-~~g~------~~~~~~d~lviA 256 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPH--EVQITD-KNQK------VSTITGNKIILA 256 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEEC-TTCC------EEEEEEEEEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCC--EEEEEe-CCCC------eEEEEeCEEEEe
Confidence 0000000010000 0012235788887777667653 444432 2342 126899999999
Q ss_pred CCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHH
Q 013810 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (436)
Q Consensus 178 tG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~ 257 (436)
||++|+.|++||.+...++. .++ +.+...| ++|+|||+|++|+|+|..|++++
T Consensus 257 tGs~p~~p~i~G~~~~~~~~---~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g---- 309 (598)
T 2x8g_A 257 TGERPKYPEIPGAVEYGITS---DDL----------FSLPYFP----------GKTLVIGASYVALECAGFLASLG---- 309 (598)
T ss_dssp CCEEECCCSSTTHHHHCEEH---HHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT----
T ss_pred CCCCCCCCCCCCcccceEcH---HHH----------hhCccCC----------CEEEEECCCHHHHHHHHHHHHcC----
Confidence 99999999999965432221 111 1112223 48999999999999999999877
Q ss_pred HhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEe--------C---CeEE----EcCCcE
Q 013810 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVD--------S---QKLI----LNDGTE 321 (436)
Q Consensus 258 ~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--------~---~~v~----~~~g~~ 321 (436)
.+|+++++..+++.+++++.+.+.+.+++.||+++.+. +.+++ . +.+. +.+|++
T Consensus 310 ----------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~ 379 (598)
T 2x8g_A 310 ----------GDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKK 379 (598)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCE
T ss_pred ----------CEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcE
Confidence 89999999877888999999999999999999999984 55552 2 3332 357776
Q ss_pred Ee--cceEEEecCCCCc-hh--cccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHH
Q 013810 322 VP--YGLLVWSTGVGPS-TL--VKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLH 396 (436)
Q Consensus 322 i~--~D~vi~a~G~~p~-~~--~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~ 396 (436)
++ +|.||+|+|++|+ ++ ++..+++++++|+|.||+++| |+.|+|||+|||+.. .+.++..|+.||+
T Consensus 380 ~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~-ts~~~VyA~GD~~~~--------~~~~~~~A~~~g~ 450 (598)
T 2x8g_A 380 FEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ-TTVSNVYAIGDINAG--------KPQLTPVAIQAGR 450 (598)
T ss_dssp EEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTSB-CSSTTEEECGGGBTT--------SCCCHHHHHHHHH
T ss_pred EeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCCc-CCCCCEEEEeeecCC--------CCccHHHHHHhHH
Confidence 55 9999999999999 45 567889999999999999999 999999999999643 1678999999999
Q ss_pred HHHhhhhhhc--------CCceeeecchhHHHH
Q 013810 397 LFQKPSFLLA--------RNWCWFFDVCSLTSI 421 (436)
Q Consensus 397 ~aa~~i~~~~--------~~~~~~~~~~~~~~~ 421 (436)
.||.||.... .+++++++.....++
T Consensus 451 ~aa~~i~~~~~~~~~~~~~p~~~~~~~~~a~vG 483 (598)
T 2x8g_A 451 YLARRLFAGATELTDYSNVATTVFTPLEYGACG 483 (598)
T ss_dssp HHHHHHHHCCCCCCCCTTCCEEECSSSCEEEEE
T ss_pred HHHHHHhcCCCcccCCCCCcEEEECCCceEEEe
Confidence 9999998532 245666655554444
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.2e-36 Score=302.87 Aligned_cols=301 Identities=16% Similarity=0.175 Sum_probs=213.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchh----h-----------hhh-----cCc------ccccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A-----------STC-----VGT------LEFRS 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~----~-----------~~~-----~~~------~~~~~ 115 (436)
++||+||||||||++||..|++.|++|+|||+++ ++..... + ... .|. .+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999975 2221100 0 000 000 01111
Q ss_pred cccchhhcc--------hhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCC
Q 013810 116 VAEPIARIQ--------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (436)
Q Consensus 116 ~~~~~~~~~--------~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i 187 (436)
+...+.... ..+.....+.++.+...-.+ .+.+.+. ++. ++.||+||||||++|+.|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~~~v~~~---~~~--------~~~~d~lViATGs~p~~p~~ 153 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--EHTLQVD---DHS--------QVIAKRIVIATGSRPNYPEF 153 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--TTEEEET---TTE--------EEEEEEEEECCCEECCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--CCEEEEc---CCc--------EEEeCEEEEccCCCCcCCCC
Confidence 101111000 01111223445555444343 3455442 444 89999999999999998886
Q ss_pred CCCc-cccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 013810 188 HGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (436)
Q Consensus 188 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~ 266 (436)
++.. ..+++. .+. +.+...| ++++|||+|++|+|+|..|++++
T Consensus 154 ~~~~~~~v~t~---~~~----------~~~~~~~----------k~vvViGgG~ig~E~A~~l~~~g------------- 197 (492)
T 3ic9_A 154 LAAAGSRLLTN---DNL----------FELNDLP----------KSVAVFGPGVIGLELGQALSRLG------------- 197 (492)
T ss_dssp HHTTGGGEECH---HHH----------TTCSSCC----------SEEEEESSCHHHHHHHHHHHHTT-------------
T ss_pred CCccCCcEEcH---HHH----------hhhhhcC----------CeEEEECCCHHHHHHHHHHHHcC-------------
Confidence 6543 233322 111 1122223 49999999999999999999877
Q ss_pred ccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce--EEEc--CC--cEEecceEEEecCCCCc
Q 013810 267 YIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILN--DG--TEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 267 ~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~--v~~~--~g--~~i~~D~vi~a~G~~p~ 336 (436)
.+|+++++. .+++.+++++.+.+.+.|++. |+++.+. +++++. +. +.+. +| +++++|.|++|+|++|+
T Consensus 198 -~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 198 -VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp -CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred -CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 899999995 577889999999999999988 9999985 888854 33 4443 67 67999999999999999
Q ss_pred -hh--cccCCCCCCCCCcEEeC-CCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc------
Q 013810 337 -TL--VKSLDLPKSPGGRIGID-EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA------ 406 (436)
Q Consensus 337 -~~--~~~~~l~~~~~G~i~vd-~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~------ 406 (436)
.+ ++.++++++++|+|.|| +++| |+.|+|||+|||+.. +++++.|..||+.||.||....
T Consensus 276 ~~~l~l~~~gl~~~~~G~i~vd~~~~~-t~~~~IyA~GD~~~~---------~~~~~~A~~~g~~aa~~i~~~~~~~~~~ 345 (492)
T 3ic9_A 276 VDKLGLENTSIELDKKNSPLFDELTLQ-TSVDHIFVAGDANNT---------LTLLHEAADDGKVAGTNAGAYPVIAQGQ 345 (492)
T ss_dssp CSSSCGGGSCCCBCTTCCBCCCTTTCB-CSSTTEEECGGGGTS---------SCSHHHHHHHHHHHHHHHHHTTSCCEEC
T ss_pred CCCCChhhcCCEECCCCCEeECccccc-CCCCCEEEEEecCCC---------CccHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 45 78889999999999999 8999 899999999999986 7889999999999999998632
Q ss_pred ---CCceeeecchhHHHHHHH
Q 013810 407 ---RNWCWFFDVCSLTSILNR 424 (436)
Q Consensus 407 ---~~~~~~~~~~~~~~~~~~ 424 (436)
.+++.+++.....++++.
T Consensus 346 ~~~~p~~~~~~p~~a~vGlte 366 (492)
T 3ic9_A 346 RRAPLSVVFTEPQVASVGLSL 366 (492)
T ss_dssp CCCCEEEECSSSEEEEEESCH
T ss_pred CCCCcEEEECCCCeEEecCCH
Confidence 234445566665555443
No 72
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=6.7e-37 Score=302.31 Aligned_cols=345 Identities=14% Similarity=0.106 Sum_probs=221.4
Q ss_pred Ccccccccccccc--ccccCCCCCcc-CCCcccccccccccccCCCCccccccccCCCCCCCCCCCcEEEECCchHHHHH
Q 013810 1 MSLFKHLLRNPTA--KSYSYSSPSII-MPSNLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRL 77 (436)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~a 77 (436)
++|+..+.|+|.. .|+..|.+... ..+. ....+..+..+... ...+.....+.....++|+|||||||||+|
T Consensus 63 n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v-~I~~le~~~~~~~~----~~~~~~~~~~~~~~~~~V~IIGgGpAGl~a 137 (456)
T 2vdc_G 63 NNFPEICGRICPQDRLCEGNCVIEQSTHGAV-TIGSVEKYINDTAW----DQGWVKPRTPSRELGLSVGVIGAGPAGLAA 137 (456)
T ss_dssp CSCHHHHHHHCCGGGSGGGGCGGGGSSSCSC-CHHHHHHHHHHHHH----HHTCCCCCCSCSSCCCCEEEECCSHHHHHH
T ss_pred CCCCccccccCCCCcchHHhcccCCCCCCCc-cHHHHHHHHHHHHH----HcCCCCCCCCcCCCCCEEEEECCCHHHHHH
Confidence 4788899999999 99999976654 3322 22222222211100 001111111112346899999999999999
Q ss_pred HHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEEEecC
Q 013810 78 MKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTD 157 (436)
Q Consensus 78 A~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~~~~~ 157 (436)
|..|++.|++|+|||+.+.+..... + +.+.+. +...+......+....++.++.+..+. ..+.+ .+
T Consensus 138 A~~L~~~G~~V~v~e~~~~~GG~l~-~----gip~~~-~~~~~~~~~~~~l~~~gv~~~~~~~v~-----~~v~~---~~ 203 (456)
T 2vdc_G 138 AEELRAKGYEVHVYDRYDRMGGLLV-Y----GIPGFK-LEKSVVERRVKLLADAGVIYHPNFEVG-----RDASL---PE 203 (456)
T ss_dssp HHHHHHHTCCEEEECSSSSCSTHHH-H----TSCTTT-SCHHHHHHHHHHHHHTTCEEETTCCBT-----TTBCH---HH
T ss_pred HHHHHHCCCeEEEEeccCCCCCeee-e----cCCCcc-CCHHHHHHHHHHHHHCCcEEEeCCEec-----cEEEh---hH
Confidence 9999999999999999876543211 1 111111 111121222223344577777654332 11211 11
Q ss_pred CcccCCCCceeeeccEEEEeCCCC-CCCCCCCCCc-cccccccChHHHHHHHHHHHHhccccCCCCCC-hhhhcccCcEE
Q 013810 158 ELRTLEPWKFKISYDKLVIALGAE-ASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGIS-EEEKSRLLHCV 234 (436)
Q Consensus 158 g~~~~~~~~~~~~~d~lViAtG~~-~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~vv 234 (436)
. .+.||+||||||+. ++.+++||.+ .++++..++....... . .. ...+... ......+++|+
T Consensus 204 ~---------~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~--~---~~-~~~~~~~~g~~~~~gk~Vv 268 (456)
T 2vdc_G 204 L---------RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKV--S---LG-DTVEAYENGSLNAAGKHVV 268 (456)
T ss_dssp H---------HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHH--H---CT-TTCSSCCTTCSCCCCSEEE
T ss_pred h---------HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhh--h---cc-cccccccccccccCCCEEE
Confidence 1 46799999999996 7788999975 3444332222111110 0 00 0000000 00013456999
Q ss_pred EECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-C-CCcccHHHHHHHHHHHHhcCCEEEecc-eEEEeC
Q 013810 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-LSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS 311 (436)
Q Consensus 235 ViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~-l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~ 311 (436)
|||+|++|+|+|..+.+.+ ..+|++++|.. . ++..+.+ .+.+++.||+++.+. ++++.+
T Consensus 269 VIGgG~~a~d~A~~~~r~G-------------a~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~ 330 (456)
T 2vdc_G 269 VLGGGDTAMDCVRTAIRQG-------------ATSVKCLYRRDRKNMPGSQRE-----VAHAEEEGVEFIWQAAPEGFTG 330 (456)
T ss_dssp EECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCSTTCSSCHHH-----HHHHHHTTCEEECCSSSCCEEE
T ss_pred EECCChhHHHHHHHHHHcC-------------CCEEEEEEeCCccCCCCCHHH-----HHHHHHCCCEEEeCCCceEEeC
Confidence 9999999999999988765 14799999964 2 5554433 245677899999884 555543
Q ss_pred Ce----EEEc------------------CC--cEEecceEEEecCCCCch---hcccCCCCCCCCCcEEeCCC-CCCCCC
Q 013810 312 QK----LILN------------------DG--TEVPYGLLVWSTGVGPST---LVKSLDLPKSPGGRIGIDEW-LRVPSV 363 (436)
Q Consensus 312 ~~----v~~~------------------~g--~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~vd~~-~~~t~~ 363 (436)
++ |++. +| .++++|.||+|+|+.|++ ++..++++++++|+|.||++ +| |+.
T Consensus 331 ~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~-Ts~ 409 (456)
T 2vdc_G 331 DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKM-TNM 409 (456)
T ss_dssp EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCB-CSS
T ss_pred CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCc-CCC
Confidence 21 2221 23 369999999999999973 67889999999999999998 89 999
Q ss_pred CCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 364 QDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 364 ~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
|+|||+|||+.. +.++..|+.||+.||++|..+..
T Consensus 410 ~~VfA~GD~~~g---------~~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 410 DGVFAAGDIVRG---------ASLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp TTEEECGGGGSS---------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeccccCC---------chHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999986 78899999999999999987543
No 73
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-36 Score=288.47 Aligned_cols=287 Identities=17% Similarity=0.174 Sum_probs=198.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCccccc-cc-ccchhhcchhhhcCCCcEEEEe
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR-SV-AEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
.++||+|||||+||++||..|++.|++|+|||+.. ..............+... .. ...+...........++.++.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 45899999999999999999999999999999752 111100000000000000 00 0112222222334467888888
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhcc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLM 215 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 215 (436)
+|+.++. .+.+.+....++. .+.||+||+|||+.|..|++||.+. ..++. ... ....+
T Consensus 92 ~v~~i~~-~~~~~v~~~~~g~--------~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~--~~~---~~~~~----- 152 (335)
T 2a87_A 92 DVESVSL-HGPLKSVVTADGQ--------THRARAVILAMGAAARYLQVPGEQELLGRGVSS--CAT---CDGFF----- 152 (335)
T ss_dssp CEEEEEC-SSSSEEEEETTSC--------EEEEEEEEECCCEEECCCCCTHHHHTBTTTEES--CHH---HHGGG-----
T ss_pred eEEEEEe-CCcEEEEEeCCCC--------EEEeCEEEECCCCCccCCCCCchHhccCCceEE--eec---cchhh-----
Confidence 8888887 3333331223554 7999999999999999999988642 11111 111 11110
Q ss_pred ccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHH
Q 013810 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (436)
Q Consensus 216 ~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~ 295 (436)
..+++|+|||+|.+|+|+|..|++.+ .+|+++++.+.+.. ...+. .+.++
T Consensus 153 ------------~~~~~v~ViG~G~~g~e~a~~l~~~g--------------~~V~l~~~~~~~~~-~~~~~---~~~~~ 202 (335)
T 2a87_A 153 ------------FRDQDIAVIGGGDSAMEEATFLTRFA--------------RSVTLVHRRDEFRA-SKIML---DRARN 202 (335)
T ss_dssp ------------GTTCEEEEECSSHHHHHHHHHHTTTC--------------SEEEEECSSSSCSS-CTTHH---HHHHH
T ss_pred ------------cCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEcCCcCCc-cHHHH---HHHhc
Confidence 22358999999999999999998765 89999999653321 12221 23456
Q ss_pred hcCCEEEecc-eEEEeCCe----EEEc---CC--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCCCCCCC
Q 013810 296 KSGVRLVRGI-VKDVDSQK----LILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLRVPSVQ 364 (436)
Q Consensus 296 ~~gV~i~~~~-v~~i~~~~----v~~~---~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~~t~~~ 364 (436)
+.||+++.+. +.+++.+. |.+. +| +++++|.||+|+|++|+ ++++ .+++++++|+|.||++++.|+.|
T Consensus 203 ~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~~t~~~ 281 (335)
T 2a87_A 203 NDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDGYVLVQGRTTSTSLP 281 (335)
T ss_dssp CTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTSCBCCSTTSSBCSST
T ss_pred cCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCccEEeCCCCCccCCC
Confidence 7899999984 88887643 7765 45 57999999999999999 5655 57888889999999975339999
Q ss_pred CEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 365 DVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 365 ~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
+|||+|||+..+ ++.+..|+.||+.||.+|....
T Consensus 282 ~iya~GD~~~~~--------~~~~~~A~~~g~~aA~~i~~~l 315 (335)
T 2a87_A 282 GVFAAGDLVDRT--------YRQAVTAAGSGCAAAIDAERWL 315 (335)
T ss_dssp TEEECGGGTCCS--------CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEeeecCCcc--------HHHHHHHHHhHHHHHHHHHHHh
Confidence 999999999852 5789999999999999998654
No 74
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=2e-36 Score=288.66 Aligned_cols=294 Identities=16% Similarity=0.146 Sum_probs=202.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcC----CCcceecchhhhhhcCcccccc--cccchhhcchhhhcCCCcEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSP----RNHMVFTPLLASTCVGTLEFRS--VAEPIARIQPAISREPGSYF 135 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 135 (436)
++||+|||||+||+++|..|++.|++|+|||+ .................+.+.. ....+...........++.+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 47999999999999999999999999999998 2221111000000000000000 00112222222334467888
Q ss_pred EEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc--ccccccChHHHHHHHHHHHHh
Q 013810 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE--NATFLREVHHAQEIRRKLLLN 213 (436)
Q Consensus 136 ~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~ 213 (436)
+.++|+.++...+.+.+.. ++. .+.||+||+|||+.|..|++||.+. +.+....+.....+...+
T Consensus 88 ~~~~v~~i~~~~~~~~v~~--~~~--------~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--- 154 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT--DSK--------AILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAA--- 154 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC--SSE--------EEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTS---
T ss_pred EEeEEEEEEEcCCEEEEEE--CCc--------EEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccch---
Confidence 8888999988777665543 454 7999999999999999999998753 112212221111111100
Q ss_pred ccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHH
Q 013810 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293 (436)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~ 293 (436)
....+++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. .+.+ ..+.
T Consensus 155 ------------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~-~~~~---~~~~ 204 (333)
T 1vdc_A 155 ------------PIFRNKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDAFRA-SKIM---QQRA 204 (333)
T ss_dssp ------------GGGTTSEEEEECCSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHHH---HHHH
T ss_pred ------------hhcCCCeEEEECCChHHHHHHHHHHhcC--------------CeEEEEecCCcCCc-cHHH---HHHH
Confidence 0022358999999999999999998765 89999999654321 2222 2244
Q ss_pred HHhcCCEEEecc-eEEEeCCe-------EEEc---CC--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCC
Q 013810 294 LSKSGVRLVRGI-VKDVDSQK-------LILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLR 359 (436)
Q Consensus 294 l~~~gV~i~~~~-v~~i~~~~-------v~~~---~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~ 359 (436)
+++.||+++.+. +.+++.+. |.+. +| +++++|.||+|+|++|+ .+++ .+++++++|+|.||++++
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G~i~vd~~~~ 283 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDGYVVTKPGTT 283 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTSCBCCCTTSC
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCCCEEechhhc
Confidence 567899999984 88886432 7775 45 57999999999999999 4554 578888899999999853
Q ss_pred CCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 360 ~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
.|+.|+|||+|||+..+ ++.+..|+.||+.||.+|.....
T Consensus 284 ~t~~~~vya~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK--------YRQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp BCSSTTEEECGGGGCSS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeeccCCC--------chhHHHHHHhHHHHHHHHHHHHH
Confidence 39999999999999852 47899999999999999987653
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.1e-35 Score=286.02 Aligned_cols=289 Identities=19% Similarity=0.190 Sum_probs=199.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec------------chhhhhhcCcccccc-----cccchhhcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------------PLLASTCVGTLEFRS-----VAEPIARIQ 124 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~------------~~~~~~~~~~~~~~~-----~~~~~~~~~ 124 (436)
++||+|||||+||+++|..|++.|++|+|||+++.+... +.......+...... ....+..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 479999999999999999999999999999998764321 000000001000000 001223333
Q ss_pred hhhhcCCCcEEEEe-EeEeEeCCCCEEE-EEEecCCcccCCCCceeeeccEEEEeCCC--CCCCCCCCCCcc---ccccc
Q 013810 125 PAISREPGSYFFLS-HCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALGA--EASTFGIHGVKE---NATFL 197 (436)
Q Consensus 125 ~~~~~~~~~~~~~~-~v~~id~~~~~v~-~~~~~~g~~~~~~~~~~~~~d~lViAtG~--~~~~~~i~g~~~---~~~~~ 197 (436)
....+..++.++.+ +|+.++.+.+.+. +.. ++. ++.||+||+|||. .|+.|++||... ..++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g--------~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVAR--DGR--------QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEET--TSC--------EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEe--CCC--------EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 33444557777664 8999998877766 542 233 7899999999995 677789998753 12222
Q ss_pred cChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-
Q 013810 198 REVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN- 276 (436)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~- 276 (436)
..+.+... ..+++|+|||+|.+|+|+|..|++.+ +|+++.+.
T Consensus 153 ~~~~~~~~----------------------~~~~~v~VvG~G~~g~e~a~~l~~~~---------------~v~~v~~~~ 195 (357)
T 4a9w_A 153 AHYSTPAP----------------------FAGMRVAIIGGGNSGAQILAEVSTVA---------------ETTWITQHE 195 (357)
T ss_dssp GGCCCSGG----------------------GTTSEEEEECCSHHHHHHHHHHTTTS---------------EEEEECSSC
T ss_pred ccCCChhh----------------------cCCCEEEEECCCcCHHHHHHHHHhhC---------------CEEEEECCC
Confidence 22211111 23359999999999999999998643 59999885
Q ss_pred C-CCCcc--cHHHHHHHHHHHH----------------------------hcCCEEEec-ceEEEeCCeEEEcCCcEEec
Q 013810 277 E-ILSSF--DDRLRHYATTQLS----------------------------KSGVRLVRG-IVKDVDSQKLILNDGTEVPY 324 (436)
Q Consensus 277 ~-~l~~~--~~~~~~~~~~~l~----------------------------~~gV~i~~~-~v~~i~~~~v~~~~g~~i~~ 324 (436)
+ +++.. +..+.+.+.+.+. +.|+ +... .+.+++.+.+.+.+|+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~g~~i~~ 274 (357)
T 4a9w_A 196 PAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWADGTERAF 274 (357)
T ss_dssp CCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTTSCEEEC
T ss_pred CeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECCCCEecC
Confidence 2 33322 2333333222222 3444 3333 47888889999999999999
Q ss_pred ceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCC--CCCCCCCCEEEec--cccccccCCCCccCCccHHHHHHHHHHHH
Q 013810 325 GLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEW--LRVPSVQDVFAVG--DCSGYLESTGKTVLPALAQVSYEQLHLFQ 399 (436)
Q Consensus 325 D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~--~~~t~~~~Vya~G--D~~~~~~~~~~~~~~~~~~~A~~~g~~aa 399 (436)
|+||+|+|++|+ ++++.++++ +++|+|.||++ ++ |+.|||||+| ||+.. .++.+..|+.||+.+|
T Consensus 275 D~vi~a~G~~p~~~~l~~~gl~-~~~G~i~vd~~~l~~-t~~~~vya~Gd~d~~~~--------~~~~~~~A~~~g~~~a 344 (357)
T 4a9w_A 275 DAVIWCTGFRPALSHLKGLDLV-TPQGQVEVDGSGLRA-LAVPSVWLLGYGDWNGM--------ASATLIGVTRYAREAV 344 (357)
T ss_dssp SEEEECCCBCCCCGGGTTTTCB-CTTSCBCBCTTSCBB-SSCTTEEECSSCGGGST--------TCSSTTTHHHHHHHHH
T ss_pred CEEEECCCcCCCCcccCccccc-CCCCCccccCCcccC-CCCCCeEEecccccccc--------chhhhhhhHHHHHHHH
Confidence 999999999999 799999998 88999999999 66 9999999999 56652 1567788999999999
Q ss_pred hhhhhhcCC
Q 013810 400 KPSFLLARN 408 (436)
Q Consensus 400 ~~i~~~~~~ 408 (436)
++|.....+
T Consensus 345 ~~i~~~l~g 353 (357)
T 4a9w_A 345 RQVTAYCAD 353 (357)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHh
Confidence 999887655
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=8.8e-34 Score=285.62 Aligned_cols=283 Identities=19% Similarity=0.189 Sum_probs=201.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec--chhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
..+||+||||||||++||.+|++.|++|+|||+...-.+. ..+.... +... . ....+...........++.++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~-~~~~-~-~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYI-SVPK-T-EGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBT-TBSS-B-CHHHHHHHHHHHHHTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccC-CCCC-C-CHHHHHHHHHHHHHHcCCEEEcC
Confidence 4589999999999999999999999999999874210000 0000000 0000 0 01122222233345568888887
Q ss_pred -EeEeEeCCC---CEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccc---cccccChHHHHHHHHHHH
Q 013810 139 -HCAGIDTDN---HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLL 211 (436)
Q Consensus 139 -~v~~id~~~---~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~---~~~~~~~~~~~~~~~~~~ 211 (436)
+|+.++.+. +.+.+.. .+|. .+.||+||+|||+.++.|++||.++. .+......+ .
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~-~~g~--------~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~-----~--- 350 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIET-ASGA--------VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCD-----G--- 350 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCC-----G---
T ss_pred CEEEEEEeccCCCceEEEEE-CCCC--------EEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCc-----h---
Confidence 899997642 2343332 3555 79999999999999999999987421 111111000 0
Q ss_pred HhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHH
Q 013810 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (436)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~ 291 (436)
....+++|+|||+|++|+|+|..|+..+ .+|+++++.+.+.. + +.+.
T Consensus 351 --------------~~~~~k~V~ViGgG~~g~E~A~~L~~~g--------------~~Vtlv~~~~~l~~-~----~~l~ 397 (521)
T 1hyu_A 351 --------------PLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMKA-D----QVLQ 397 (521)
T ss_dssp --------------GGGBTSEEEEECCSHHHHHHHHHHHHHB--------------SEEEEECSSSSCCS-C----HHHH
T ss_pred --------------hhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCcccCc-C----HHHH
Confidence 0123469999999999999999999876 89999999654321 2 3455
Q ss_pred HHHHh-cCCEEEecc-eEEEeCC-----eEEEcC---Cc--EEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCC
Q 013810 292 TQLSK-SGVRLVRGI-VKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWL 358 (436)
Q Consensus 292 ~~l~~-~gV~i~~~~-v~~i~~~-----~v~~~~---g~--~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~ 358 (436)
+.+++ .||+++.+. +++++.+ ++.+.+ |+ ++++|.|++++|++|+ +++.. .++++++|+|.||+++
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G~I~Vd~~~ 476 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMGEIIIDAKC 476 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTSCBCCCTTC
T ss_pred HHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCCcEEeCCCC
Confidence 66777 699999994 8888753 456653 53 6899999999999998 57765 4778889999999999
Q ss_pred CCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 359 RVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 359 ~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
| |+.|+|||+|||+..+ .+.+..|+.||..||.+|..+.
T Consensus 477 ~-ts~p~VfA~GD~~~~~--------~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 477 E-TSVKGVFAAGDCTTVP--------YKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp B-CSSTTEEECSTTBCCS--------SCCHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCCEEEeecccCCC--------cceeeehHHhHHHHHHHHHHHH
Confidence 9 8999999999999863 4789999999999999998654
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=5.9e-34 Score=275.45 Aligned_cols=289 Identities=13% Similarity=0.153 Sum_probs=199.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCccee------------cchhhhhhcCccccc--------------
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVF------------TPLLASTCVGTLEFR-------------- 114 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~~~~------------~~~~~~~~~~~~~~~-------------- 114 (436)
++||+|||||+||+++|..|++.|+ +|+|||+++ ... .+.......+.....
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999986 211 010000000100000
Q ss_pred c--cccchhhcchhhhcCCCcEEEEe-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc
Q 013810 115 S--VAEPIARIQPAISREPGSYFFLS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK 191 (436)
Q Consensus 115 ~--~~~~~~~~~~~~~~~~~~~~~~~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~ 191 (436)
. ....+......+....++.++.+ +|+.++.+.+.+.+.. .+. .+.||+||+|||+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~--~~g--------~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT--TTE--------TYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE--SSC--------CEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe--CCC--------EEEeCEEEECCCCCCc-cCCCC--
Confidence 0 00112222222334567787765 7888987755555543 222 6899999999999865 56776
Q ss_pred cccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEE
Q 013810 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (436)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~ 271 (436)
+..++...+.+.. . ...++|+|||+|.+|+|+|..|.+.+ .+|+
T Consensus 150 ~~~~~~~~~~~~~-------------~---------~~~~~vvVvG~G~~g~e~a~~l~~~g--------------~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIEDFD-------------N---------FNKGQYVVIGGNESGFDAAYQLAKNG--------------SDIA 193 (369)
T ss_dssp SSCEEGGGCSCGG-------------G---------SCSSEEEEECCSHHHHHHHHHHHHTT--------------CEEE
T ss_pred CceechhhcCChh-------------h---------cCCCEEEEECCCcCHHHHHHHHHhcC--------------CeEE
Confidence 3333333222110 0 12358999999999999999999876 8999
Q ss_pred EEeCCC-CCC-------cccHHHHHHHHHHHHhcC-CEEEecc-eEEE--eCC--eEEEcCCcEEe-cceEEEecCCCCc
Q 013810 272 LIEANE-ILS-------SFDDRLRHYATTQLSKSG-VRLVRGI-VKDV--DSQ--KLILNDGTEVP-YGLLVWSTGVGPS 336 (436)
Q Consensus 272 lv~~~~-~l~-------~~~~~~~~~~~~~l~~~g-V~i~~~~-v~~i--~~~--~v~~~~g~~i~-~D~vi~a~G~~p~ 336 (436)
++++.+ +++ .+++...+.+.+.+++.| |+++.+. |.++ +++ .|++.+|+++. +|.||+|+|++|+
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 999954 332 255677788889999997 9999984 8888 444 46778888765 6999999999999
Q ss_pred h-hcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 337 T-LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 337 ~-~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
. ++.+.+++ +++|++.||++++.|++|+|||+|||+..+... ...+..+.+||+.+|++|....
T Consensus 274 ~~~~~~~~~~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~-----~~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 274 KNPIVQQLFV-TTNQDIKLTTHDESTRYPNIFMIGATVENDNAK-----LCYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp GSHHHHHHSC-CTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCC-----CCSHHHHGGGHHHHHHHHHHHT
T ss_pred cchhhhhhcc-CCCCCEEechhhcccCCCCeEEeccccccCCee-----EEEEehhhHHHHHHHHHHhccc
Confidence 4 66554566 778999999875559999999999999864311 1234568889999999998654
No 78
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=8.2e-33 Score=274.79 Aligned_cols=276 Identities=12% Similarity=0.120 Sum_probs=190.8
Q ss_pred CcEEEECCchHHHHHHHhccc---CCCe---EEEEcCCCcceecchhh------------------hhhcCc----cccc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDT---SLYD---VVCVSPRNHMVFTPLLA------------------STCVGT----LEFR 114 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~---~g~~---v~lie~~~~~~~~~~~~------------------~~~~~~----~~~~ 114 (436)
++|+|||||+||++||..|++ .|++ |+|||+++.++...... ...... ..+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 99999987643221100 000000 0000
Q ss_pred cc---------------ccchhhcchhhhcCCCcE--E-EEeEeEeEeCCCC----EEEEEEecCCcccCCCCceeeecc
Q 013810 115 SV---------------AEPIARIQPAISREPGSY--F-FLSHCAGIDTDNH----VVHCETVTDELRTLEPWKFKISYD 172 (436)
Q Consensus 115 ~~---------------~~~~~~~~~~~~~~~~~~--~-~~~~v~~id~~~~----~v~~~~~~~g~~~~~~~~~~~~~d 172 (436)
+. ...+.++...+.+..++. + ...+|+.++...+ .|.+....+|. ..++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~------~~~~~~d 156 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT------IYSEEFD 156 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE------EEEEEES
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc------eEEEEcC
Confidence 00 011111122222223443 3 3468888876554 34433211231 1278999
Q ss_pred EEEEeCC--CCCCCCCCCCCcc---ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHH
Q 013810 173 KLVIALG--AEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 247 (436)
Q Consensus 173 ~lViAtG--~~~~~~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~ 247 (436)
+||+||| +.|+.|++||.+. .+++..++.+... ..+++|+|||+|++|+|+|.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~----------------------~~~k~VvVVG~G~sg~eiA~ 214 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALE----------------------FKDKTVLLVGSSYSAEDIGS 214 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGG----------------------GTTSEEEEECCSTTHHHHHH
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhH----------------------cCCCEEEEEcCCCCHHHHHH
Confidence 9999999 7899999999753 2344433322111 23459999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHHHHHHHHHHHHhcCCEEEecceEEEeCCeEEEcCCcEEecce
Q 013810 248 ELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGL 326 (436)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~~~v~~~~g~~i~~D~ 326 (436)
+|++.+ .+|+++++. .+++..- ..||+++ ..|+++++++|++.||+++++|.
T Consensus 215 ~l~~~g--------------~~V~li~~~~~~~~~~~------------~~~V~~~-~~V~~i~~~~V~~~dG~~i~~D~ 267 (464)
T 2xve_A 215 QCYKYG--------------AKKLISCYRTAPMGYKW------------PENWDER-PNLVRVDTENAYFADGSSEKVDA 267 (464)
T ss_dssp HHHHTT--------------CSEEEEECSSCCCCCCC------------CTTEEEC-SCEEEECSSEEEETTSCEEECSE
T ss_pred HHHHhC--------------CeEEEEEECCCCCCCCC------------CCceEEc-CCeEEEeCCEEEECCCCEEeCCE
Confidence 999877 899999985 3443210 2478887 56899988999999999999999
Q ss_pred EEEecCCCCc-hhccc-CCCCCCCCCcEEeCCC---CCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhh
Q 013810 327 LVWSTGVGPS-TLVKS-LDLPKSPGGRIGIDEW---LRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKP 401 (436)
Q Consensus 327 vi~a~G~~p~-~~~~~-~~l~~~~~G~i~vd~~---~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~ 401 (436)
||+|+|++|+ +++.. ++++++++|++ ++.+ ++ |+.|+|||+|||+.. ..+..|..||+.+|++
T Consensus 268 Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~-t~~p~i~aiGd~~~~----------~~~~~a~~qa~~~a~~ 335 (464)
T 2xve_A 268 IILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVW-EDNPKFFYIGMQDQW----------YSFNMFDAQAWYARDV 335 (464)
T ss_dssp EEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEE-SSSTTEEECSCSCCS----------SCHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCcCcccccccCCCccc-ccccceEec-CCCCCEEEEeCcccc----------cchHHHHHHHHHHHHH
Confidence 9999999999 67765 67887766666 3433 45 899999999999873 4688999999999999
Q ss_pred hhhh
Q 013810 402 SFLL 405 (436)
Q Consensus 402 i~~~ 405 (436)
|...
T Consensus 336 l~G~ 339 (464)
T 2xve_A 336 IMGR 339 (464)
T ss_dssp HTTS
T ss_pred HcCC
Confidence 9754
No 79
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=1.6e-33 Score=303.69 Aligned_cols=345 Identities=12% Similarity=0.061 Sum_probs=219.0
Q ss_pred Ccccccccccccc--ccccCCCCCccCCCcccccccccccccCC----CCccccccccCCCCCCCCCCCcEEEECCchHH
Q 013810 1 MSLFKHLLRNPTA--KSYSYSSPSIIMPSNLILTCLSHFTTDAS----PSTVQLTQYSGLGPTKANEKPRVVVLGSGWAG 74 (436)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~VvIIGgG~AG 74 (436)
++|...+.|.|.. .|+..|.+............+.++..+.. ......+........+....+||+||||||||
T Consensus 120 n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAG 199 (1025)
T 1gte_A 120 NPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPAS 199 (1025)
T ss_dssp CTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHH
T ss_pred CChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHhCCccccCccccccccCCccCCCEEEEECccHHH
Confidence 4788888999987 88888876543222223333333333210 00000000000000011235799999999999
Q ss_pred HHHHHhcccCCC-eEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEeEeEeCCCCEEEEE
Q 013810 75 CRLMKGIDTSLY-DVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCE 153 (436)
Q Consensus 75 l~aA~~L~~~g~-~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~id~~~~~v~~~ 153 (436)
++||.+|++.|+ +|+|||+++.+.+.. .+ +.+.+. ....+.+....+....++.++.+..... +.+.+
T Consensus 200 l~aA~~L~~~G~~~Vtv~E~~~~~GG~~-~~----~ip~~~-~~~~~~~~~~~~~~~~gv~~~~~~~v~~----~~v~~- 268 (1025)
T 1gte_A 200 ISCASFLARLGYSDITIFEKQEYVGGLS-TS----EIPQFR-LPYDVVNFEIELMKDLGVKIICGKSLSE----NEITL- 268 (1025)
T ss_dssp HHHHHHHHHTTCCCEEEEESSSSCSTHH-HH----TSCTTT-SCHHHHHHHHHHHHTTTCEEEESCCBST----TSBCH-
T ss_pred HHHHHHHHhcCCCcEEEEeCCCCCCccc-cc----cCCccc-CCHHHHHHHHHHHHHCCcEEEcccEecc----ceEEh-
Confidence 999999999999 799999987654321 11 111111 1111112222334557888887755421 22322
Q ss_pred EecCCcccCCCCceeeeccEEEEeCCC-CCCCCCC-CCCc--cccccccChHHHHHHHHHHHH---hccccCCCCCChhh
Q 013810 154 TVTDELRTLEPWKFKISYDKLVIALGA-EASTFGI-HGVK--ENATFLREVHHAQEIRRKLLL---NLMLSDVPGISEEE 226 (436)
Q Consensus 154 ~~~~g~~~~~~~~~~~~~d~lViAtG~-~~~~~~i-~g~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~ 226 (436)
.++. .+.||+||||||+ .|+.+++ +|.+ .++++..++. ...+.... +......+
T Consensus 269 --~~~~--------~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L---~~~~~~~~~~~~~~~~~~~------ 329 (1025)
T 1gte_A 269 --NTLK--------EEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFL---PLVAKSSKAGMCACHSPLP------ 329 (1025)
T ss_dssp --HHHH--------HTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHH---HHHHHHHCBTTBSCCCCCC------
T ss_pred --hhcC--------ccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHH---HHHHhhccccccccccccc------
Confidence 1232 5789999999999 5887664 4653 3444333222 11111000 00000111
Q ss_pred hcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC--CCCcccHHHHHHHHHHHHhcCCEEEec
Q 013810 227 KSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--ILSSFDDRLRHYATTQLSKSGVRLVRG 304 (436)
Q Consensus 227 ~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~l~~~~~~~~~~~~~~l~~~gV~i~~~ 304 (436)
..+++|+|||||++|+|+|..+.+++ ..+|+++++.+ .++.+++++ +.+++.||+++.+
T Consensus 330 -~~~~~VvVIGgG~~g~e~A~~~~~~G-------------~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~Gv~~~~~ 390 (1025)
T 1gte_A 330 -SIRGAVIVLGAGDTAFDCATSALRCG-------------ARRVFLVFRKGFVNIRAVPEEV-----ELAKEEKCEFLPF 390 (1025)
T ss_dssp -CCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCGGGCCSCHHHH-----HHHHHTTCEEECS
T ss_pred -ccCCcEEEECCChHHHHHHHHHHHcC-------------CCEEEEEEecChhhCCCCHHHH-----HHHHHcCCEEEeC
Confidence 12348999999999999999998876 14999999953 566666554 3567789999987
Q ss_pred c-eEEEeC--Ce---EEEc------CC---------cEEecceEEEecCCCCc--hhccc-CCCCCCCCCcEEeCC-CCC
Q 013810 305 I-VKDVDS--QK---LILN------DG---------TEVPYGLLVWSTGVGPS--TLVKS-LDLPKSPGGRIGIDE-WLR 359 (436)
Q Consensus 305 ~-v~~i~~--~~---v~~~------~g---------~~i~~D~vi~a~G~~p~--~~~~~-~~l~~~~~G~i~vd~-~~~ 359 (436)
. +.++.. +. |++. +| .++++|.||+|+|++|+ .++.+ .|++++++|+|.||+ ++|
T Consensus 391 ~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~ 470 (1025)
T 1gte_A 391 LSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQ 470 (1025)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCB
T ss_pred CCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCc
Confidence 4 666642 32 3332 22 36899999999999864 46666 489999999999997 799
Q ss_pred CCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhh
Q 013810 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 360 ~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
|+.|+|||+|||+.. +.++..|+.||+.||++|..
T Consensus 471 -Ts~~~VfA~GD~~~~---------~~~~~~A~~~G~~aA~~i~~ 505 (1025)
T 1gte_A 471 -TSEPWVFAGGDIVGM---------ANTTVESVNDGKQASWYIHK 505 (1025)
T ss_dssp -CSSTTEEECSGGGCS---------CCCHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCEEEeCCCCCC---------chHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 77899999999999999975
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=5.1e-33 Score=274.99 Aligned_cols=299 Identities=13% Similarity=0.086 Sum_probs=195.4
Q ss_pred CCcEEEECCchHHHHHHHhccc-C------CCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-S------LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSY 134 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (436)
.++|+||||||||++||..|++ . |++|+|||+.+.++... .++...+..... .+...........++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-~~gv~p~~~~~~----~~~~~~~~~~~~~~v~ 77 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-RSGVAPDHPKIK----SISKQFEKTAEDPRFR 77 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-HHTSCTTCTGGG----GGHHHHHHHHTSTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-ccccCCCCCCHH----HHHHHHHHHHhcCCCE
Confidence 4799999999999999999999 7 99999999987754322 222222222222 2222222334556788
Q ss_pred EEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCC-CCCCCCCCCc-cccccccChHHHHHHHHHHHH
Q 013810 135 FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE-ASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (436)
Q Consensus 135 ~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~-~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~ 212 (436)
++.+ + .++ +.+.+ .++ .+.||+||||||+. ++.+++||.+ .++++..++ ...+..
T Consensus 78 ~~~~-v-~v~---~~v~~---~~~---------~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~------~~~~~~ 134 (456)
T 1lqt_A 78 FFGN-V-VVG---EHVQP---GEL---------SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDF------VGWYNA 134 (456)
T ss_dssp EEES-C-CBT---TTBCH---HHH---------HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHH------HHHHTT
T ss_pred EEee-E-EEC---CEEEE---CCC---------eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHH------Hhhhhc
Confidence 8765 2 131 22322 122 57899999999997 7888999975 333433222 221111
Q ss_pred hccc-cCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHH--------HHHhhhcCCCCccEEEEEeCC-CCCCcc
Q 013810 213 NLML-SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR--------DVRQRYSHVKDYIHVTLIEAN-EILSSF 282 (436)
Q Consensus 213 ~~~~-~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~--------~~~~~~~~~~~~~~V~lv~~~-~~l~~~ 282 (436)
.... ...+. ..+++|+|||+|++|+|+|..|+..... ...+.... ....+|+++.|. ++...+
T Consensus 135 ~~d~~~~~~~------~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~-~g~~~V~lv~r~~~~~~~f 207 (456)
T 1lqt_A 135 HPHFEQVSPD------LSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP-RGIQEVVIVGRRGPLQAAF 207 (456)
T ss_dssp CGGGTTCCCC------CCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT-CCCCEEEEECSSCGGGCCC
T ss_pred Ccccccchhh------cCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH-CCCcEEEEEecCChhhhcc
Confidence 1001 11111 1346999999999999999999874310 00111111 012599999985 333222
Q ss_pred c-------------------HHH------------------HHHHHHHHHh------cCCEEEecc-eEEEeCC----eE
Q 013810 283 D-------------------DRL------------------RHYATTQLSK------SGVRLVRGI-VKDVDSQ----KL 314 (436)
Q Consensus 283 ~-------------------~~~------------------~~~~~~~l~~------~gV~i~~~~-v~~i~~~----~v 314 (436)
. +++ .+.+.+.+.+ +||+++++. +.++.++ .|
T Consensus 208 ~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v 287 (456)
T 1lqt_A 208 TTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERI 287 (456)
T ss_dssp CHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEE
T ss_pred ChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEE
Confidence 1 111 2344455555 789999984 8888653 36
Q ss_pred EEc----------------CC--cEEecceEEEecCCCCchhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccc
Q 013810 315 ILN----------------DG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYL 376 (436)
Q Consensus 315 ~~~----------------~g--~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~ 376 (436)
++. +| ++++||+||+++|++|+++ .+++++++|+|.+|+++|+|+.|+|||+|||+..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l---~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp 364 (456)
T 1lqt_A 288 VLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT---PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGP 364 (456)
T ss_dssp EEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC---TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCS
T ss_pred EEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCC---CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCC
Confidence 554 34 4699999999999999974 46777888999999999988999999999999752
Q ss_pred cCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 377 ESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 377 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
...+..|+.+|..+|.+|....
T Consensus 365 --------~~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 365 --------TGVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp --------CSCTTHHHHHHHHHHHHHHHHH
T ss_pred --------chhHHHHHHHHHHHHHHHHHHH
Confidence 2346689999999999998653
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.98 E-value=1.1e-32 Score=272.78 Aligned_cols=298 Identities=14% Similarity=0.089 Sum_probs=190.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
.++|+||||||||++||..|++.| ++|+|||+++.++.. ...+........ ..+......+....++.++.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~----~~~~~~~~~~~~~~gv~~~~~~ 80 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEV----KNVINTFTQTARSDRCAFYGNV 80 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGG----GGHHHHHHHHHTSTTEEEEBSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccH----HHHHHHHHHHHHhCCcEEEeee
Confidence 479999999999999999999988 999999998875322 111111111111 1222222334456678877653
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCC-CCCCCCCCc-cccccccChHHHHHHHHHHHHhcccc
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA-STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~-~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
.. .+.+.+. + . .+.||+||||||+.+ +.|++||.+ .++++..++ ..+.+. .....
T Consensus 81 ~v-----~~~V~~~---~-~--------~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~---~~~~~~---~~d~~ 137 (460)
T 1cjc_A 81 EV-----GRDVTVQ---E-L--------QDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAF---VGWYNG---LPENR 137 (460)
T ss_dssp CB-----TTTBCHH---H-H--------HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHH---HHHHTT---CGGGT
T ss_pred EE-----eeEEEec---c-c--------eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHH---HHHhhc---Ccccc
Confidence 22 1222221 1 1 578999999999995 778999975 344443322 111110 00011
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHH--------HHHHhhhcCCCCc-cEEEEEeCCC-C---------
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIM--------RDVRQRYSHVKDY-IHVTLIEANE-I--------- 278 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~--------~~~~~~~~~~~~~-~~V~lv~~~~-~--------- 278 (436)
..+. .-.+++|+|||+|++|+|+|..|+.... ........ +.+ .+|+++.|.. .
T Consensus 138 ~~~~-----~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~--~~g~~~V~lv~r~~~~~~~ft~~el 210 (460)
T 1cjc_A 138 ELAP-----DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALR--QSRVKTVWIVGRRGPLQVAFTIKEL 210 (460)
T ss_dssp TCCC-----CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHH--TCCCCEEEEECSSCGGGCCCCHHHH
T ss_pred cccc-----CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHh--hCCCcEEEEEEcCChHhhccCHHHH
Confidence 1110 0124699999999999999999983110 00000000 112 4899999853 2
Q ss_pred -----CCcc-------------------cHH---HHHHHHHHHHh--------------cCCEEEecc-eEEEeCC----
Q 013810 279 -----LSSF-------------------DDR---LRHYATTQLSK--------------SGVRLVRGI-VKDVDSQ---- 312 (436)
Q Consensus 279 -----l~~~-------------------~~~---~~~~~~~~l~~--------------~gV~i~~~~-v~~i~~~---- 312 (436)
++.. +.. +.+.+.+.+.+ .||++++++ +.++..+
T Consensus 211 ~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~ 290 (460)
T 1cjc_A 211 REMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGR 290 (460)
T ss_dssp HHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSS
T ss_pred HHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCc
Confidence 1211 000 22334444544 889999984 7777542
Q ss_pred ---eEEEc---------------CC--cEEecceEEEecCCCCchhcccCCC-CCCCCCcEEeCCCCCCCC-CCCEEEec
Q 013810 313 ---KLILN---------------DG--TEVPYGLLVWSTGVGPSTLVKSLDL-PKSPGGRIGIDEWLRVPS-VQDVFAVG 370 (436)
Q Consensus 313 ---~v~~~---------------~g--~~i~~D~vi~a~G~~p~~~~~~~~l-~~~~~G~i~vd~~~~~t~-~~~Vya~G 370 (436)
.|++. +| ++++||+||+++|++|+++ .++ +++++|+|.||+++| |+ .|+|||+|
T Consensus 291 ~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~gl~~~d~~g~i~vn~~~r-t~~~p~vya~G 366 (460)
T 1cjc_A 291 RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---DPSVPFDPKLGVVPNMEGR-VVDVPGLYCSG 366 (460)
T ss_dssp SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---CTTSCCBTTTTBCCEETTE-ETTCTTEEECT
T ss_pred eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---CCCcccccCCCeeECCCCc-CcCCCCEEEEE
Confidence 24443 34 5799999999999999974 577 888888999999999 66 79999999
Q ss_pred cccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 371 DCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 371 D~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
||+..+ ...+..|+.+|+.+|.+|....
T Consensus 367 d~~~g~--------~~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 367 WVKRGP--------TGVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp HHHHCT--------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCcCC--------CccHHHHHHHHHHHHHHHHHHH
Confidence 999752 2357789999999999998654
No 82
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=2.7e-31 Score=263.30 Aligned_cols=279 Identities=14% Similarity=0.071 Sum_probs=185.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCCcceecchhhhhh----------------------------cCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFTPLLASTC----------------------------VGT 110 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~~~~~~~~~~~~~----------------------------~~~ 110 (436)
..++|+|||||+||+++|..|++.|. +|+|||+++............ ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45899999999999999999999999 999999986542110000000 000
Q ss_pred c------------ccccc-----------ccchhhcchhhhcCCCcEE-EEeEeEeEeCCCCEEEEEEec--CCcccCCC
Q 013810 111 L------------EFRSV-----------AEPIARIQPAISREPGSYF-FLSHCAGIDTDNHVVHCETVT--DELRTLEP 164 (436)
Q Consensus 111 ~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~v~~id~~~~~v~~~~~~--~g~~~~~~ 164 (436)
. .+.+. ...+.++...+....+..+ ...+|+.++...+.+.+.... +|..
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~---- 160 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSP---- 160 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCC----
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCe----
Confidence 0 00000 0011111122222222233 346888888766655443322 1310
Q ss_pred CceeeeccEEEEeCCC--CCCCCCCCCCcc-------ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEE
Q 013810 165 WKFKISYDKLVIALGA--EASTFGIHGVKE-------NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVV 235 (436)
Q Consensus 165 ~~~~~~~d~lViAtG~--~~~~~~i~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvV 235 (436)
..++.||+||+|||+ .|+.|++||.+. .+++..++.+... ..+++|+|
T Consensus 161 -~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~----------------------~~~k~VvV 217 (447)
T 2gv8_A 161 -ISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPEL----------------------FVGESVLV 217 (447)
T ss_dssp -EEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGG----------------------GTTCCEEE
T ss_pred -eEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhh----------------------cCCCEEEE
Confidence 115899999999998 788899999742 2344333322211 23359999
Q ss_pred ECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEEe--CC
Q 013810 236 VGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD--SQ 312 (436)
Q Consensus 236 iG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~--~~ 312 (436)
||+|++|+|+|..|++.+ .+ |+++++...+ +...||++. ..|++++ +.
T Consensus 218 vG~G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~--------------l~~~~i~~~-~~v~~~~~~~~ 268 (447)
T 2gv8_A 218 VGGASSANDLVRHLTPVA--------------KHPIYQSLLGGGD--------------IQNESLQQV-PEITKFDPTTR 268 (447)
T ss_dssp ECSSHHHHHHHHHHTTTS--------------CSSEEEECTTCCS--------------CBCSSEEEE-CCEEEEETTTT
T ss_pred EccCcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc--------------CCCCCeEEe-cCeEEEecCCC
Confidence 999999999999998766 77 9999996432 445677743 3588884 46
Q ss_pred eEEEcCCcE-EecceEEEecCCCCc-hh-----cccCCCCCCCCCcEEeCCCCCC--CCCCCEEEeccccccccCCCCcc
Q 013810 313 KLILNDGTE-VPYGLLVWSTGVGPS-TL-----VKSLDLPKSPGGRIGIDEWLRV--PSVQDVFAVGDCSGYLESTGKTV 383 (436)
Q Consensus 313 ~v~~~~g~~-i~~D~vi~a~G~~p~-~~-----~~~~~l~~~~~G~i~vd~~~~~--t~~~~Vya~GD~~~~~~~~~~~~ 383 (436)
.|++.||++ +++|.||+|+|++|+ ++ ++.++..+..++.+.++.+.++ +++|+||++||+...
T Consensus 269 ~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~-------- 340 (447)
T 2gv8_A 269 EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV-------- 340 (447)
T ss_dssp EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS--------
T ss_pred EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccc--------
Confidence 899999987 799999999999999 67 6655322333455666655443 789999999999874
Q ss_pred CCccHHHHHHHHHHHHhhhhhh
Q 013810 384 LPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 384 ~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
..+..|..||+.+|++|...
T Consensus 341 --~~~~~a~~qa~~~a~~~~g~ 360 (447)
T 2gv8_A 341 --VPFPTSQAQAAFLARVWSGR 360 (447)
T ss_dssp --CHHHHHHHHHHHHHHHHTTS
T ss_pred --cCchHHHHHHHHHHHHHcCC
Confidence 47889999999999999753
No 83
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.97 E-value=3e-31 Score=284.16 Aligned_cols=284 Identities=16% Similarity=0.164 Sum_probs=195.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhc-CcccccccccchhhcchhhhcCCCcEEEEe-E
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV-GTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (436)
++|||||||||||++||.+|++.|++|+|||+++.+..+.. . +. ..................+....++.++.+ +
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~--~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-D--TAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-G--SSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-c--CCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 47899999999999999999999999999999877653322 1 10 001100011111222222334457777664 7
Q ss_pred eEeEeCCCCEEEEEEecCCcccCC-------CCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHH
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLE-------PWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLL 211 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~-------~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~ 211 (436)
|.+++.......+....+. .... .....+.||+||||||+.|+.|++||.+ +++++..++.+ +.+.
T Consensus 205 V~~i~~~~~~~~v~~~~~~-~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~---~l~~-- 278 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVH-LDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRS---YLNR-- 278 (965)
T ss_dssp EEEEETTTEEEEEEECSTT-CSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHH---HHHT--
T ss_pred EEeeecCCceeeeEeeccc-ccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHH---HHHh--
Confidence 8888865543333211110 0000 0012689999999999999999999986 44554433222 1110
Q ss_pred HhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHH
Q 013810 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (436)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~ 291 (436)
... ..+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. +. .
T Consensus 279 ----~~~---------~~gk~vvViGgG~~g~E~A~~L~~~G--------------~~Vtvv~~~~~~~---~~-----~ 323 (965)
T 2gag_A 279 ----YGV---------RAGARIAVATTNDSAYELVRELAATG--------------GVVAVIDARSSIS---AA-----A 323 (965)
T ss_dssp ----TCE---------ESCSSEEEEESSTTHHHHHHHHGGGT--------------CCSEEEESCSSCC---HH-----H
T ss_pred ----cCC---------CCCCeEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEECCCccc---hh-----H
Confidence 011 22358999999999999999999876 7899999864332 12 4
Q ss_pred HHHHhcCCEEEecc-eEEEeC--C----eEEEcC-------C--cEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEe
Q 013810 292 TQLSKSGVRLVRGI-VKDVDS--Q----KLILND-------G--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGI 354 (436)
Q Consensus 292 ~~l~~~gV~i~~~~-v~~i~~--~----~v~~~~-------g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~v 354 (436)
+.+++.||+++.+. +.+++. + .|++.+ | ++++||.|++++|++|+ .++... +|.|.+
T Consensus 324 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~------~g~i~v 397 (965)
T 2gag_A 324 AQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR------QGKLDW 397 (965)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT------TCCEEE
T ss_pred HHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC------CCcEEE
Confidence 56888999999995 888865 2 566664 5 57999999999999999 465543 467999
Q ss_pred CCCCC----CCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 355 DEWLR----VPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 355 d~~~~----~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
|++++ .|+.|+|||+|||++. +. ...|..||+.||.+|...
T Consensus 398 d~~~~~~v~~ts~p~IyAaGD~a~~---------~~-l~~A~~~G~~aA~~i~~~ 442 (965)
T 2gag_A 398 DTTIHAFVPADAVANQHLAGAMTGR---------LD-TASALSTGAATGAAAATA 442 (965)
T ss_dssp ETTTTEEEECSCCTTEEECGGGGTC---------CS-HHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCEEEEEecCCc---------hh-HHHHHHHHHHHHHHHHHH
Confidence 98876 3799999999999985 33 448999999999999764
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=1.5e-31 Score=278.11 Aligned_cols=266 Identities=15% Similarity=0.103 Sum_probs=187.9
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
..++||+|||||+|||+||..|++.|++|+|||+++.+.+.........+......+. ..+...+....++.++.++
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~gv~~~~~~ 465 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVK---EYREAVLAELPNVEIYRES 465 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHH---HHHHHHHHTCTTEEEESSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHH---HHHHHHHHHcCCCEEEECC
Confidence 4568999999999999999999999999999999887665543332333322222211 1111212222256655432
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCC--------CCCCCCCCCcc-ccccccChHHHHHHHHHH
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE--------ASTFGIHGVKE-NATFLREVHHAQEIRRKL 210 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~--------~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~ 210 (436)
. +. ..++. ++.||+||+|||+. |..|++||.+. .+++. .+... .
T Consensus 466 ~---------v~---~~~~~--------~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~---~~~l~--~-- 518 (690)
T 3k30_A 466 P---------MT---GDDIV--------EFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGP---DDLFA--G-- 518 (690)
T ss_dssp C---------CC---HHHHH--------HTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECH---HHHHT--T--
T ss_pred e---------ec---HHHHh--------hcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcH---HHHhC--C--
Confidence 1 11 11222 68899999999998 44678888752 33322 22111 0
Q ss_pred HHhccccCCCCCChhhhcccCcEEEEC--CChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCccc-HHH
Q 013810 211 LLNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFD-DRL 286 (436)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~vvViG--~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~~~-~~~ 286 (436)
.. ..+++|+||| +|.+|+|+|..|++.+ .+|+++++.+ +++... +..
T Consensus 519 -------~~--------~~g~~VvViG~ggG~~g~e~A~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~ 569 (690)
T 3k30_A 519 -------RL--------PDGKKVVVYDDDHYYLGGVVAELLAQKG--------------YEVSIVTPGAQVSSWTNNTFE 569 (690)
T ss_dssp -------CC--------CSSSEEEEEECSCSSHHHHHHHHHHHTT--------------CEEEEEESSSSTTGGGGGGTC
T ss_pred -------CC--------CCCCEEEEEcCCCCccHHHHHHHHHhCC--------------CeeEEEecccccccccccchh
Confidence 11 2335799999 9999999999999876 8999999964 444332 455
Q ss_pred HHHHHHHHHhcCCEEEecc-eEEEeCCeEEEc-----CCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCCCCC
Q 013810 287 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDEWLR 359 (436)
Q Consensus 287 ~~~~~~~l~~~gV~i~~~~-v~~i~~~~v~~~-----~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~~~~ 359 (436)
...+.+.+++.||++++++ |++++.+++.+. +++++++|.||+|+|++|+ .++..++. .+. +
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~----~~~-------~ 638 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVA----RRD-------A 638 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH----HHH-------H
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh----hhc-------c
Confidence 6778889999999999995 999998876553 4567999999999999999 45554331 111 5
Q ss_pred CCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 360 VPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 360 ~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
|+.|+|||+|||+. ++.+..|+.||+.||.||....
T Consensus 639 -t~~~~VyaiGD~~~----------~~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 639 -GEIASVRGIGDAWA----------PGTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp -TSCSEEEECGGGTS----------CBCHHHHHHHHHHHHHHTTCCC
T ss_pred -cCCCCEEEEeCCCc----------hhhHHHHHHHHHHHHHHHHhhc
Confidence 89999999999998 5677789999999999998764
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=2.4e-31 Score=277.72 Aligned_cols=271 Identities=16% Similarity=0.162 Sum_probs=183.7
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhh--cCCCcEEEE
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAIS--REPGSYFFL 137 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 137 (436)
...++|+|||||||||+||..|++.|++|+|||+++.+...........+...+......+......+. ...++
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v---- 462 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQ---- 462 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCE----
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCce----
Confidence 346899999999999999999999999999999988754432221111122111111111111111110 00122
Q ss_pred eEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCC--------CCCCCCCCCcc---ccccccChHHHHHH
Q 013810 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE--------ASTFGIHGVKE---NATFLREVHHAQEI 206 (436)
Q Consensus 138 ~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~--------~~~~~i~g~~~---~~~~~~~~~~~~~~ 206 (436)
.++. +..+.+ .++. .+.||+||||||+. |..|++||.++ ++++ ..+...
T Consensus 463 ----~i~~-~~~v~~---~~~~--------~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~---~~~~l~- 522 (729)
T 1o94_A 463 ----LALG-QKPMTA---DDVL--------QYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLT---PEQVMD- 522 (729)
T ss_dssp ----EECS-CCCCCH---HHHH--------TSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEEC---HHHHHH-
T ss_pred ----EEEe-CeEEeh---hhcc--------ccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEE---HHHHhc-
Confidence 2222 122221 1232 68899999999998 45678898752 3333 222211
Q ss_pred HHHHHHhccccCCCCCChhhhcccCcEEEEC--CChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--cc
Q 013810 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--SF 282 (436)
Q Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG--~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~--~~ 282 (436)
. .. ..+++|+||| +|++|+|+|..|++++ .+|+++++.++++ .+
T Consensus 523 -~---------~~--------~~gk~VvVIG~GgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~l~~~~~~ 570 (729)
T 1o94_A 523 -G---------KK--------KIGKRVVILNADTYFMAPSLAEKLATAG--------------HEVTIVSGVHLANYMHF 570 (729)
T ss_dssp -C---------CS--------CCCSEEEEEECCCSSHHHHHHHHHHHTT--------------CEEEEEESSCTTHHHHH
T ss_pred -C---------CC--------CCCCeEEEEcCCCCchHHHHHHHHHHcC--------------CEEEEEecccccccccc
Confidence 0 00 2345899999 9999999999999876 8999999966332 12
Q ss_pred cHHHHHHHHHHHHhcCCEEEecc-eEEEeCCeEEEc----CC-cE------------------EecceEEEecCCCCc-h
Q 013810 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN----DG-TE------------------VPYGLLVWSTGVGPS-T 337 (436)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~~v~~~----~g-~~------------------i~~D~vi~a~G~~p~-~ 337 (436)
+.. ...+.+.|++.||+++.+. +.+++.+++.+. ++ ++ +++|.||+|+|++|+ .
T Consensus 571 ~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~ 649 (729)
T 1o94_A 571 TLE-YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT 649 (729)
T ss_dssp TTC-HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH
T ss_pred ccc-HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH
Confidence 222 4567788899999999995 999988776542 33 33 999999999999999 5
Q ss_pred hcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 338 LVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 338 ~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
++..++. .+|+++| |+.|+|||+|||+. ++.+..|+.||+.||.+|....
T Consensus 650 l~~~l~~--------~vd~~~~-t~~~~VyAiGD~~~----------~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 650 LWNELKA--------RESEWAE-NDIKGIYLIGDAEA----------PRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp HHHHHHH--------TGGGTGG-GTCCEEEECGGGTS----------CCCHHHHHHHHHHHHHTTTSSC
T ss_pred HHHHHhh--------hcccccc-cCCCCeEEEeCccc----------hhhHHHHHHHHHHHHHHhhhhc
Confidence 6554421 3688889 89999999999997 5678899999999999998653
No 86
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=5.9e-31 Score=263.36 Aligned_cols=256 Identities=16% Similarity=0.163 Sum_probs=184.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhh-hhcCcccccccccchhhcchhhhcCCCcEEEE-eE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS-TCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SH 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (436)
++||+|||||+||++||.+|++. ++|+|||+++++.+...... ...+... ........+...+ ..++.++. .+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~--~~~~~~~~l~~~l--~~~v~~~~~~~ 182 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNK--DSRKVVEELVGKL--NENTKIYLETS 182 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTE--EHHHHHHHHHHTC--CTTEEEETTEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCC--CHHHHHHHHHHHH--hcCCEEEcCCE
Confidence 46899999999999999999999 99999999987655422110 0111110 1111111112222 45676544 57
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHHHHHHHHhccccC
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSD 218 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (436)
|..++.+.+.+.+....++. ...+.||+||+|||+.|+.|++||.+ +++++.. ++..+.+. ...
T Consensus 183 v~~i~~~~~~~~~~~~~~~~------~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~---~~~~~~~~------~~~ 247 (493)
T 1y56_A 183 ALGVFDKGEYFLVPVVRGDK------LIEILAKRVVLATGAIDSTMLFENNDMPGVFRRD---FALEVMNV------WEV 247 (493)
T ss_dssp ECCCEECSSSEEEEEEETTE------EEEEEESCEEECCCEEECCCCCTTTTSTTEEEHH---HHHHHHHT------SCB
T ss_pred EEEEEcCCcEEEEEEecCCe------EEEEECCEEEECCCCCccCCCCCCCCCCCEEEcH---HHHHHHHh------ccc
Confidence 88888877665554322332 12689999999999999999999986 4454432 22222221 011
Q ss_pred CCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcC
Q 013810 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (436)
Q Consensus 219 ~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~g 298 (436)
..+++++|||+|++|+| +.+++.|
T Consensus 248 ---------~~~~~vvViGgG~~gle-----------------------------------------------~~l~~~G 271 (493)
T 1y56_A 248 ---------APGRKVAVTGSKADEVI-----------------------------------------------QELERWG 271 (493)
T ss_dssp ---------CSCSEEEEESTTHHHHH-----------------------------------------------HHHHHHT
T ss_pred ---------CCCCEEEEECCCHHHHH-----------------------------------------------HHHHhCC
Confidence 22358999999999876 3456679
Q ss_pred CEEEecc-eEEEeCC----eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCC--CCCCcEE-eCCCCCCCCCCCEEEe
Q 013810 299 VRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPK--SPGGRIG-IDEWLRVPSVQDVFAV 369 (436)
Q Consensus 299 V~i~~~~-v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~--~~~G~i~-vd~~~~~t~~~~Vya~ 369 (436)
|+++.+. |.+++.+ .+++.+|+++++|.||+++|++|+ ++++.+++++ +++|+|. ||++++ +.|+|||+
T Consensus 272 V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~ 349 (493)
T 1y56_A 272 IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVA 349 (493)
T ss_dssp CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEEC
T ss_pred cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEE
Confidence 9999985 8888753 367888999999999999999999 5888888765 5688887 899998 89999999
Q ss_pred ccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 370 GDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 370 GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
|||+. ...+..|..||+.||.+|...
T Consensus 350 GD~~~----------~~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 350 GSAVS----------IKPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp STTTC----------CCCHHHHHHHHHHHHHHHHHH
T ss_pred eccCC----------ccCHHHHHHHHHHHHHHHHHH
Confidence 99998 457889999999999999764
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.5e-30 Score=259.28 Aligned_cols=305 Identities=12% Similarity=0.092 Sum_probs=191.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCC-----CeEEEEcCCCcceecchhh--hhhcC---------------cccc-----
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSL-----YDVVCVSPRNHMVFTPLLA--STCVG---------------TLEF----- 113 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g-----~~v~lie~~~~~~~~~~~~--~~~~~---------------~~~~----- 113 (436)
..+||+|||||+||+++|..|++.| .+|+|||+++.+.|.+... +.... ...+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3469999999999999999999999 9999999999877654211 00000 0000
Q ss_pred -----------cc---cccchhhcchhhhcCCCcEEEEe-EeEeEeCC---CCE--EEEEEecCCcccCCCCceeeeccE
Q 013810 114 -----------RS---VAEPIARIQPAISREPGSYFFLS-HCAGIDTD---NHV--VHCETVTDELRTLEPWKFKISYDK 173 (436)
Q Consensus 114 -----------~~---~~~~~~~~~~~~~~~~~~~~~~~-~v~~id~~---~~~--v~~~~~~~g~~~~~~~~~~~~~d~ 173 (436)
.. ....+.++...+....++.++.+ +|+.++.. .+. +.+... ++. .+++++.||+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~-~g~----g~~~~~~~d~ 183 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISR-NAD----GEELVRTTRA 183 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEE-ETT----SCEEEEEESE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEe-cCC----CceEEEEeCE
Confidence 00 01122223333344455556554 78888875 442 233321 221 0122689999
Q ss_pred EEEeCCCCCCCCC-CCCCcc--ccccccChHHHH-HHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHH
Q 013810 174 LVIALGAEASTFG-IHGVKE--NATFLREVHHAQ-EIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGEL 249 (436)
Q Consensus 174 lViAtG~~~~~~~-i~g~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l 249 (436)
||+|||+.|..|+ +++... .+++...+.+.. .+... ...+++|+|||+|.+|+|+|..|
T Consensus 184 lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~vvVvGgG~sg~e~a~~l 246 (463)
T 3s5w_A 184 LVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCS-----------------SGKPMKIAIIGGGQSAAEAFIDL 246 (463)
T ss_dssp EEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHHHH
T ss_pred EEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhc-----------------ccCCCeEEEECCCHhHHHHHHHH
Confidence 9999999887776 333332 345544433311 11100 01345999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCc--------------------ccHHHHHHHHHHHHh------------
Q 013810 250 SDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS--------------------FDDRLRHYATTQLSK------------ 296 (436)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~--------------------~~~~~~~~~~~~l~~------------ 296 (436)
++.. ++.+|++++|.. +++. ++++....+.+.+..
T Consensus 247 ~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (463)
T 3s5w_A 247 NDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIE 314 (463)
T ss_dssp HHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHH
T ss_pred HhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHH
Confidence 9861 238999999964 4331 222333333333222
Q ss_pred --------------cCCEEEecc-eEEEeC--Ce--EEEc---CCc--EEecceEEEecCCCCc---hhcccCCCCCCCC
Q 013810 297 --------------SGVRLVRGI-VKDVDS--QK--LILN---DGT--EVPYGLLVWSTGVGPS---TLVKSLDLPKSPG 349 (436)
Q Consensus 297 --------------~gV~i~~~~-v~~i~~--~~--v~~~---~g~--~i~~D~vi~a~G~~p~---~~~~~~~l~~~~~ 349 (436)
.||+++.++ |++++. +. +.+. +|+ ++++|.||+|+|++|+ +++..+....
T Consensus 315 ~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~--- 391 (463)
T 3s5w_A 315 RIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL--- 391 (463)
T ss_dssp HHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---
Confidence 599999995 888754 33 5555 665 4999999999999998 4565554332
Q ss_pred CcEEeCCCCCCCC----CCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 350 GRIGIDEWLRVPS----VQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 350 G~i~vd~~~~~t~----~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
|++.||+++++.. .++|||+|||....... .+.+...|.+++.+++..+-...
T Consensus 392 g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~g~~----~~~l~~~a~r~~~i~~~~~~~~~ 448 (463)
T 3s5w_A 392 GDHEIGRDYRLQTDERCKVAIYAQGFSQASHGLS----DTLLSVLPVRAEEISGSLYQHLK 448 (463)
T ss_dssp C--CCCTTSBCCBCTTBCSEEEESSCCHHHHCTT----TTSSTTHHHHHHHHHHHHHHHHC
T ss_pred CCcccCcccccccCCCCCCeEEEcCCCcccCCcC----ccchhHHHHHHHHHHHHHHhhcC
Confidence 7899999999543 45699999998753321 25677889999998877665543
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=3.6e-30 Score=267.16 Aligned_cols=269 Identities=17% Similarity=0.191 Sum_probs=186.5
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeE
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (436)
..++||+|||||+||++||..|++.|++|+|||+++.+.+...+.....+...... .+..+ .......++.++.++
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~gv~~~~~~ 446 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYE---TLRYY-RRMIEVTGVTLKLNH 446 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHH---HHHHH-HHHHHHHTCEEEESC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHH---HHHHH-HHHHHHcCCEEEeCc
Confidence 34689999999999999999999999999999999887665433322222211111 11111 112233466666553
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceee-eccEEEEeCCCCCCCCCCCCCcc-ccccccChHHHHHHHHHHHHhcccc
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKI-SYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~-~~d~lViAtG~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
.+. .. .+ .||+||||||+.|+.|++||.+. ++++. .+. +. ..
T Consensus 447 ~v~---------------~~--------~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~---~~~------l~----~~ 490 (671)
T 1ps9_A 447 TVT---------------AD--------QLQAFDETILASGIVPRTPPIDGIDHPKVLSY---LDV------LR----DK 490 (671)
T ss_dssp CCC---------------SS--------SSCCSSEEEECCCEEECCCCCBTTTSTTEEEH---HHH------HT----SC
T ss_pred Eec---------------HH--------HhhcCCEEEEccCCCcCCCCCCCCCCCcEeeH---HHH------hh----CC
Confidence 211 11 35 89999999999999999999753 34432 111 10 00
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHH------HHHhhhc-----------------CCCCccEEEEEe
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR------DVRQRYS-----------------HVKDYIHVTLIE 274 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~------~~~~~~~-----------------~~~~~~~V~lv~ 274 (436)
. ..+++|+|||+|++|+|+|..|++.+.. .+.+.+. ......+|++++
T Consensus 491 ~---------~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 561 (671)
T 1ps9_A 491 A---------PVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQ 561 (671)
T ss_dssp C---------CCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEEC
T ss_pred C---------CCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEE
Confidence 0 2345999999999999999999876521 1111110 011236899998
Q ss_pred CCC-CC-CcccHHHHHHHHHHHHhcCCEEEecc-eEEEeCCeEEE-cCC--cEEecceEEEecCCCCc-hhcccCCCCCC
Q 013810 275 ANE-IL-SSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL-NDG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (436)
Q Consensus 275 ~~~-~l-~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~~v~~-~~g--~~i~~D~vi~a~G~~p~-~~~~~~~l~~~ 347 (436)
+.+ .+ ..+++.....+.+.|++.||+++++. +++++++++.+ .+| +++++|.||+|+|++|+ .+++.+
T Consensus 562 ~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l----- 636 (671)
T 1ps9_A 562 RKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPL----- 636 (671)
T ss_dssp SSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHHH-----
T ss_pred ecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHHH-----
Confidence 843 33 45667777788889999999999995 99999888877 677 57999999999999998 455432
Q ss_pred CCCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhh
Q 013810 348 PGGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPS 402 (436)
Q Consensus 348 ~~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 402 (436)
+ ...++||++|||+... ++.+..|++||..+|.||
T Consensus 637 -----------~-~~g~~v~aiGD~~~~~--------~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 -----------I-DSGKTVHLIGGCDVAM--------ELDARRAIAQGTRLALEI 671 (671)
T ss_dssp -----------H-TTTCCEEECGGGTCCS--------SCCHHHHHHHHHHHHHHC
T ss_pred -----------H-hcCCCEEEECCcCccC--------chhHHHHHHHHHHHHHhC
Confidence 1 2346899999999852 346999999999999986
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=3.8e-29 Score=252.03 Aligned_cols=287 Identities=14% Similarity=0.130 Sum_probs=186.8
Q ss_pred CCcEEEECCchHHHHHHHhcc-cCCCeEEEEcCCCcceecchh---hhhhcCcc----------------cccc---ccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGID-TSLYDVVCVSPRNHMVFTPLL---ASTCVGTL----------------EFRS---VAE 118 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~-~~g~~v~lie~~~~~~~~~~~---~~~~~~~~----------------~~~~---~~~ 118 (436)
++||+|||||+||+++|..|+ +.|++|+|||+++.+...... ++...... .... ...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 999999999998755322110 11100000 0000 011
Q ss_pred chhhcchhhhcCCCc--EE-EEeEeEeEeCCCC--EEEEEEecCCcccCCCCceeeeccEEEEeCC--CCCCCCCCCCCc
Q 013810 119 PIARIQPAISREPGS--YF-FLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (436)
Q Consensus 119 ~~~~~~~~~~~~~~~--~~-~~~~v~~id~~~~--~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG--~~~~~~~i~g~~ 191 (436)
.+..+........++ .+ ...+|++++.+.+ .+.+.. .+|+ ++.||+||+||| +.|+.|++||.+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~G~--------~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT-DHGE--------VYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE-TTSC--------EEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE-cCCC--------EEEeCEEEECCcccccCCCCCCCCcc
Confidence 222222233333444 33 3357888876544 555543 3565 799999999999 689999999975
Q ss_pred c---ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013810 192 E---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (436)
Q Consensus 192 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~ 268 (436)
. ..++.....+.. ...+++|+|||+|.+|+|+|..|++.+ .
T Consensus 159 ~f~g~~~~~~~~~~~~----------------------~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 202 (540)
T 3gwf_A 159 TFEGETIHTAAWPEGK----------------------SLAGRRVGVIGTGSTGQQVITSLAPEV--------------E 202 (540)
T ss_dssp GCCSEEEEGGGCCSSC----------------------CCTTSEEEEECCSHHHHHHHHHHTTTC--------------S
T ss_pred ccCCCEEEeecCCCcc----------------------ccccceEEEECCCchHHHHHHHHHhhC--------------C
Confidence 3 223332221100 023469999999999999999998765 8
Q ss_pred EEEEEeCCC--CCCcc----cHHHHHHHH---------------------------------------------------
Q 013810 269 HVTLIEANE--ILSSF----DDRLRHYAT--------------------------------------------------- 291 (436)
Q Consensus 269 ~V~lv~~~~--~l~~~----~~~~~~~~~--------------------------------------------------- 291 (436)
+|++++|.+ +++.+ .+...+.+.
T Consensus 203 ~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~ 282 (540)
T 3gwf_A 203 HLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFM 282 (540)
T ss_dssp EEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHH
T ss_pred EEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhh
Confidence 999999964 23322 222211111
Q ss_pred ----------------------H---------------------------------HHHhcCCEEE---ecceEEEeCCe
Q 013810 292 ----------------------T---------------------------------QLSKSGVRLV---RGIVKDVDSQK 313 (436)
Q Consensus 292 ----------------------~---------------------------------~l~~~gV~i~---~~~v~~i~~~~ 313 (436)
+ .+.+.+|+++ ...|+++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g 362 (540)
T 3gwf_A 283 FGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG 362 (540)
T ss_dssp HTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE
T ss_pred hhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe
Confidence 0 0114589998 45699999999
Q ss_pred EEEcCCcEEecceEEEecCCCCch-hcccCCCCCCCCC---------cEEeCCCCCCCCCCCEEEe-ccccccccCCCCc
Q 013810 314 LILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGG---------RIGIDEWLRVPSVQDVFAV-GDCSGYLESTGKT 382 (436)
Q Consensus 314 v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G---------~i~vd~~~~~t~~~~Vya~-GD~~~~~~~~~~~ 382 (436)
|+++||+++++|+||+|||++++. ++..+++. ..+| .+.....+.+.+.||+|.+ |..+..
T Consensus 363 v~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~------- 434 (540)
T 3gwf_A 363 VVTEDGVLHELDVLVFATGFDAVDGNYRRIEIR-GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPF------- 434 (540)
T ss_dssp EEETTCCEEECSEEEECCCBSCSSHHHHTSEEE-CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBC-------
T ss_pred EEcCCCCEEECCEEEECCccCccccCcCcceEE-CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCC-------
Confidence 999999999999999999999984 55444321 1122 1223333556799999999 776542
Q ss_pred cCCccHHHHHHHHHHHHhhhh
Q 013810 383 VLPALAQVSYEQLHLFQKPSF 403 (436)
Q Consensus 383 ~~~~~~~~A~~~g~~aa~~i~ 403 (436)
......+..|+..+++.|.
T Consensus 435 --~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 435 --TNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp --SCHHHHHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHHHHH
Confidence 4566788899999988774
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=1.6e-27 Score=240.49 Aligned_cols=296 Identities=12% Similarity=0.107 Sum_probs=177.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch---hhhhhcCc----------------ccccc---ccc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL---LASTCVGT----------------LEFRS---VAE 118 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~---~~~~~~~~----------------~~~~~---~~~ 118 (436)
.++||||||||+||+++|..|++.|++|+|||+++.++.... .++..+.. ..... ...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 457999999999999999999999999999999876532210 01000000 00000 011
Q ss_pred chhhcchhhhcCCCc--E-EEEeEeEeEeCCC--CEEEEEEecCCcccCCCCceeeeccEEEEeCC--CCCCCCCCCCCc
Q 013810 119 PIARIQPAISREPGS--Y-FFLSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (436)
Q Consensus 119 ~~~~~~~~~~~~~~~--~-~~~~~v~~id~~~--~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG--~~~~~~~i~g~~ 191 (436)
.+..+...+.+..++ . .+..+|++++.+. +.+.+.. .+|. ++.||+||+||| +.|+.|++||.+
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~--------~~~ad~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL-DNEE--------VVTCRFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE-TTTE--------EEEEEEEEECCCSCBC---CCCTTGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE-CCCC--------EEEeCEEEECcCCCCCCcCCCCCCcc
Confidence 122222222222232 2 2334777776543 3455543 3565 799999999999 789999999985
Q ss_pred c---ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 013810 192 E---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (436)
Q Consensus 192 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~ 268 (436)
. ..++.....+. ....|. .....+++|+|||+|.+|+|+|..|++.+ .
T Consensus 159 ~f~g~~~h~~~~~~~------------~~~~~~---~~~~~~krV~VIG~G~tgve~a~~la~~~--------------~ 209 (545)
T 3uox_A 159 SFKGESFHSSRWPTD------------AEGAPK---GVDFTGKRVGVIGTGATGVQIIPIAAETA--------------K 209 (545)
T ss_dssp GCCSEEEEGGGCCBC------------TTSCBS---CCCCBTCEEEEECCSHHHHHHHHHHTTTB--------------S
T ss_pred ccCCCeEEccccccc------------cccccc---ccccCCCeEEEECCCccHHHHHHHHHhhC--------------C
Confidence 3 12222211100 000000 00124469999999999999999998765 8
Q ss_pred EEEEEeCCC--CCCcc----cHHHHHHH----------------------------------------------------
Q 013810 269 HVTLIEANE--ILSSF----DDRLRHYA---------------------------------------------------- 290 (436)
Q Consensus 269 ~V~lv~~~~--~l~~~----~~~~~~~~---------------------------------------------------- 290 (436)
+|++++|.+ +++.. ++...+.+
T Consensus 210 ~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~ 289 (545)
T 3uox_A 210 ELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWL 289 (545)
T ss_dssp EEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHH
T ss_pred EEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHH
Confidence 999999964 23321 11111111
Q ss_pred -------------------------------------------------------HHHHHhcCCEEEe---cceEEEeCC
Q 013810 291 -------------------------------------------------------TTQLSKSGVRLVR---GIVKDVDSQ 312 (436)
Q Consensus 291 -------------------------------------------------------~~~l~~~gV~i~~---~~v~~i~~~ 312 (436)
.+.|.+.+|+++. ..|++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~ 369 (545)
T 3uox_A 290 SGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE 369 (545)
T ss_dssp TSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC
Confidence 0112233888984 469999999
Q ss_pred eEEEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeCC----------CCCCCCCCCEEEeccccccccCCCC
Q 013810 313 KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGIDE----------WLRVPSVQDVFAVGDCSGYLESTGK 381 (436)
Q Consensus 313 ~v~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd~----------~~~~t~~~~Vya~GD~~~~~~~~~~ 381 (436)
+|++.|| ++++|+||+|||+.++ .++..+.+. ..+| ..+++ .+.+.+.||+|.+.--... .+
T Consensus 370 gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i~-g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~---~~- 442 (545)
T 3uox_A 370 GIKTADA-AYDLDVIIYATGFDAVTGSLDRIDIR-GKDN-VRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNG---ST- 442 (545)
T ss_dssp EEEESSC-EEECSEEEECCCCBSSSCSCTTSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGT---GG-
T ss_pred eEEeCCC-eeecCEEEECCccccccccCCCceEE-CCCC-ccHHHhhccccceeeccccCCCCcEEEEeCCCCC---Cc-
Confidence 9999999 9999999999999985 333322221 1223 22221 2344789999998443321 00
Q ss_pred ccCCccHHHHHHHHHHHHhhhh
Q 013810 382 TVLPALAQVSYEQLHLFQKPSF 403 (436)
Q Consensus 382 ~~~~~~~~~A~~~g~~aa~~i~ 403 (436)
.......+..|+..+++.|.
T Consensus 443 --~~s~~~~~e~~~~~i~~~i~ 462 (545)
T 3uox_A 443 --FCNVGVCGGLQAEWVLRMIS 462 (545)
T ss_dssp --GSCHHHHHHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHHHHH
Confidence 13456778899999988775
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=4.9e-27 Score=237.11 Aligned_cols=290 Identities=14% Similarity=0.141 Sum_probs=182.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch---hhhhhcCcc----------------ccc---cccc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL---LASTCVGTL----------------EFR---SVAE 118 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~---~~~~~~~~~----------------~~~---~~~~ 118 (436)
.++||||||||+||+++|..|++.|++|+|||+++.+..... .++..+..+ ... ....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 347999999999999999999999999999999876532211 111110000 000 0011
Q ss_pred chhhcchhhhcCCCc--EE-EEeEeEeEeCCCC--EEEEEEecCCcccCCCCceeeeccEEEEeCC--CCCCCCCCCCCc
Q 013810 119 PIARIQPAISREPGS--YF-FLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (436)
Q Consensus 119 ~~~~~~~~~~~~~~~--~~-~~~~v~~id~~~~--~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG--~~~~~~~i~g~~ 191 (436)
.+..+.....+..++ .+ ...+|++++.+.. .+.+.. .+|. ++.||+||+||| +.|+.|++||.+
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~-~~G~--------~i~ad~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT-DRGD--------EVSARFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE-TTCC--------EEEEEEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE-CCCC--------EEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 222222223333443 23 3347888876544 555543 3565 799999999999 789999999986
Q ss_pred c---ccccccChH-HHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 013810 192 E---NATFLREVH-HAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (436)
Q Consensus 192 ~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~ 267 (436)
. ..++..... +... ..+++|+|||+|.+|+|+|..|++.+
T Consensus 171 ~f~g~~~~~~~~~~~~~~----------------------~~~krV~VIG~G~sgve~a~~l~~~~-------------- 214 (549)
T 4ap3_A 171 RFTGDIVHTARWPHDGVD----------------------FTGKRVGVIGTGSSGIQSIPIIAEQA-------------- 214 (549)
T ss_dssp GCCSEEEEGGGCCTTCCC----------------------CBTCEEEEECCSHHHHHHHHHHHHHB--------------
T ss_pred cCCCceEEeccccccccc----------------------cCCCEEEEECCCchHHHHHHHHHhhC--------------
Confidence 3 223332221 1100 23459999999999999999999876
Q ss_pred cEEEEEeCCCC--CCcccHHH----HHH----------------------------------------------------
Q 013810 268 IHVTLIEANEI--LSSFDDRL----RHY---------------------------------------------------- 289 (436)
Q Consensus 268 ~~V~lv~~~~~--l~~~~~~~----~~~---------------------------------------------------- 289 (436)
.+|++++|.+. ++..+.++ .+.
T Consensus 215 ~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~ 294 (549)
T 4ap3_A 215 EQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFS 294 (549)
T ss_dssp SEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHT
T ss_pred CEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHH
Confidence 89999999642 33221111 100
Q ss_pred -------------------HHH-----------------------------------HHHhcCCEEE---ecceEEEeCC
Q 013810 290 -------------------ATT-----------------------------------QLSKSGVRLV---RGIVKDVDSQ 312 (436)
Q Consensus 290 -------------------~~~-----------------------------------~l~~~gV~i~---~~~v~~i~~~ 312 (436)
+.+ .+.+.+|+++ ...|++|+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~ 374 (549)
T 4ap3_A 295 KAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET 374 (549)
T ss_dssp TSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC
Confidence 000 0223388888 6679999999
Q ss_pred eEEEcCCcEEecceEEEecCCCCch-hcccCCCCCCCCCcEEeC----------CCCCCCCCCCEEEeccccccccCCCC
Q 013810 313 KLILNDGTEVPYGLLVWSTGVGPST-LVKSLDLPKSPGGRIGID----------EWLRVPSVQDVFAVGDCSGYLESTGK 381 (436)
Q Consensus 313 ~v~~~~g~~i~~D~vi~a~G~~p~~-~~~~~~l~~~~~G~i~vd----------~~~~~t~~~~Vya~GD~~~~~~~~~~ 381 (436)
+|++.|| ++++|+||+|||+.+++ ++..+.+. ..+| +.++ ..+.+.+.||.|.+.--... .+
T Consensus 375 gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~-g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~---~~- 447 (549)
T 4ap3_A 375 GIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEIV-GRGG-RTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSP---SV- 447 (549)
T ss_dssp EEEESSC-EEECSEEEECCCEEESSTTGGGSEEE-CGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSC---GG-
T ss_pred cEEeCCC-ceecCEEEECCcccccccccCceeEE-CCCC-cCHHHhhccchhhccccccCCCCcEEEEeCCCCC---Cc-
Confidence 9999999 99999999999999884 55444322 1122 3333 22344689999987432211 00
Q ss_pred ccCCccHHHHHHHHHHHHhhhhh
Q 013810 382 TVLPALAQVSYEQLHLFQKPSFL 404 (436)
Q Consensus 382 ~~~~~~~~~A~~~g~~aa~~i~~ 404 (436)
.......+..|+..+++-|..
T Consensus 448 --~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 448 --LANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp --GSCHHHHHHHHHHHHHHHHHH
T ss_pred --CccHHHHHHHHHHHHHHHHHH
Confidence 134566788899988877753
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.4e-25 Score=227.15 Aligned_cols=291 Identities=14% Similarity=0.189 Sum_probs=181.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecch---hhhhhcCc----c--c----------ccc---cccc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL---LASTCVGT----L--E----------FRS---VAEP 119 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~---~~~~~~~~----~--~----------~~~---~~~~ 119 (436)
.+||+|||||+||+++|..|++.|++|+|||+++.+..... .++..... . . ... ....
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 47999999999999999999999999999999876532110 01100000 0 0 000 0011
Q ss_pred hhhcchhhhcCCC--cEE-EEeEeEeEeCCC--CEEEEEEecCCcccCCCCceeeeccEEEEeCC--CCCCCCCCCCCcc
Q 013810 120 IARIQPAISREPG--SYF-FLSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVKE 192 (436)
Q Consensus 120 ~~~~~~~~~~~~~--~~~-~~~~v~~id~~~--~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG--~~~~~~~i~g~~~ 192 (436)
+.++...+....+ ..+ ...+|++++.+. +.+.+.. .+|. ++.||+||+||| +.|+.|++||.+.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~--------~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHGD--------RIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE-TTCC--------EEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE-CCCC--------EEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 1222222222222 222 234777776543 3555543 3565 789999999999 5788899999752
Q ss_pred ---ccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE
Q 013810 193 ---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (436)
Q Consensus 193 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~ 269 (436)
..++...... ... ...+++|+|||+|.+|+|+|..|+..+ .+
T Consensus 167 f~G~~~hs~~~~~--------------~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~--------------~~ 211 (542)
T 1w4x_A 167 FAGNLYHTGNWPH--------------EPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQA--------------AE 211 (542)
T ss_dssp CCSEEEEGGGCCS--------------SCC-------CCBTCEEEEECCSHHHHHHHHHHHHHB--------------SE
T ss_pred CCCceEECCCCCC--------------chh-------ccCCCEEEEECCCccHHHHHHHHhhcC--------------ce
Confidence 1233221110 000 023469999999999999999999876 89
Q ss_pred EEEEeCCC-C-CCc----ccHHHH--------------------------------------------------------
Q 013810 270 VTLIEANE-I-LSS----FDDRLR-------------------------------------------------------- 287 (436)
Q Consensus 270 V~lv~~~~-~-l~~----~~~~~~-------------------------------------------------------- 287 (436)
|+++.|.+ . ++. +.+...
T Consensus 212 vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~ 291 (542)
T 1w4x_A 212 LFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAA 291 (542)
T ss_dssp EEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGS
T ss_pred EEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHH
Confidence 99999853 2 121 111110
Q ss_pred ---------------HHHHHH-----------------------------------HHhcCCEEE---ecceEEEeCCeE
Q 013810 288 ---------------HYATTQ-----------------------------------LSKSGVRLV---RGIVKDVDSQKL 314 (436)
Q Consensus 288 ---------------~~~~~~-----------------------------------l~~~gV~i~---~~~v~~i~~~~v 314 (436)
+.+.+. +.+.+|+++ ...|+++++++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv 371 (542)
T 1w4x_A 292 YRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGV 371 (542)
T ss_dssp STTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEE
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeE
Confidence 000111 112357777 345999999999
Q ss_pred EEcCCcEEecceEEEecCCCCc-hhcccCCCCCCCCCcEEeC---------CCCCCCCCCCEEEe-ccccccccCCCCcc
Q 013810 315 ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGRIGID---------EWLRVPSVQDVFAV-GDCSGYLESTGKTV 383 (436)
Q Consensus 315 ~~~~g~~i~~D~vi~a~G~~p~-~~~~~~~l~~~~~G~i~vd---------~~~~~t~~~~Vya~-GD~~~~~~~~~~~~ 383 (436)
+++| +++++|+||+|||+.++ .++..+++. ..+|....+ ..+.+.+.||+|++ |+.+...
T Consensus 372 ~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i~-g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~------- 442 (542)
T 1w4x_A 372 RTSE-REYELDSLVLATGFDALTGALFKIDIR-GVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSA------- 442 (542)
T ss_dssp EESS-CEEECSEEEECCCCCCTTHHHHTSEEE-CGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGG-------
T ss_pred EeCC-eEEecCEEEEcCCccccccCcCceeeE-CCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcc-------
Confidence 9999 99999999999999996 555544332 233433332 12555788999998 8886421
Q ss_pred CCccHHHHHHHHHHHHhhhhhh
Q 013810 384 LPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 384 ~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
.+..+..|..|++.++++|...
T Consensus 443 ~~~~~~~~e~q~~~ia~~i~~~ 464 (542)
T 1w4x_A 443 LSNMLVSIEQHVEWVTDHIAYM 464 (542)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHH
Confidence 1455688999999999999654
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.89 E-value=1.8e-21 Score=194.80 Aligned_cols=301 Identities=12% Similarity=0.091 Sum_probs=172.6
Q ss_pred CCCCcEEEECCchHHHHHHHhcccC--------------CCeEEEEcCCCcceecch--hhhhhcCccccc---------
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTS--------------LYDVVCVSPRNHMVFTPL--LASTCVGTLEFR--------- 114 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~--------------g~~v~lie~~~~~~~~~~--~~~~~~~~~~~~--------- 114 (436)
...+||||||+||+||++|..|.+. +.....+|+.+.+.|++. +++.........
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 3458999999999999999998653 235788999988877643 222111111000
Q ss_pred -------------------------ccccchhhcchhhhcCCCcEE-EEeEeEeEeCCC--------CEEEEEE--ecCC
Q 013810 115 -------------------------SVAEPIARIQPAISREPGSYF-FLSHCAGIDTDN--------HVVHCET--VTDE 158 (436)
Q Consensus 115 -------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~v~~id~~~--------~~v~~~~--~~~g 158 (436)
....++.++...+++..+..+ +..+|+++.... ..+.+.. ...|
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g 196 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETG 196 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTC
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCc
Confidence 011133444444444444333 334777775422 1243332 2223
Q ss_pred cccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHHHHHHHHhccccCCCCCChhhhcccCcEEEECC
Q 013810 159 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 238 (436)
Q Consensus 159 ~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~ 238 (436)
. ..++.+++||+|||..|..|..++....+++...+.+....... ....+|+|+|||+
T Consensus 197 ~------~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~----------------~~~~gKrV~VVG~ 254 (501)
T 4b63_A 197 E------ISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLK----------------DKSKPYNIAVLGS 254 (501)
T ss_dssp C------EEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSC----------------CTTSCCEEEEECC
T ss_pred e------EEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccc----------------cccCCcEEEEECC
Confidence 2 23688999999999988888777666677777666543321110 1134569999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCc---------ccHH-----------HHHHH-------
Q 013810 239 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS---------FDDR-----------LRHYA------- 290 (436)
Q Consensus 239 G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~~---------~~~~-----------~~~~~------- 290 (436)
|.||+|++..|++.. .+.+|+++.|++ +.+. +.++ ....+
T Consensus 255 G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~ 322 (501)
T 4b63_A 255 GQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKAT 322 (501)
T ss_dssp SHHHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGG
T ss_pred cHHHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 999999999998642 237999999963 2211 1111 11111
Q ss_pred -------------HHHHHh----------cCCEEEecc-eEE------------------EeCCeEEEcCCcEEecceEE
Q 013810 291 -------------TTQLSK----------SGVRLVRGI-VKD------------------VDSQKLILNDGTEVPYGLLV 328 (436)
Q Consensus 291 -------------~~~l~~----------~gV~i~~~~-v~~------------------i~~~~v~~~~g~~i~~D~vi 328 (436)
.+.+.+ ....+..+. +.. ++.+++.+.+|+++++|.||
T Consensus 323 ~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI 402 (501)
T 4b63_A 323 NYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALM 402 (501)
T ss_dssp TSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEE
T ss_pred hhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEE
Confidence 111100 011232221 222 22345677889999999999
Q ss_pred EecCCCCc--h-hcccC-CCCCCCCCcEEeCCCCCCC-------CCCCEEEeccccccccCCCCccCCccHHHHHHHHHH
Q 013810 329 WSTGVGPS--T-LVKSL-DLPKSPGGRIGIDEWLRVP-------SVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHL 397 (436)
Q Consensus 329 ~a~G~~p~--~-~~~~~-~l~~~~~G~i~vd~~~~~t-------~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~ 397 (436)
+|||++++ . ++..+ .+..|.+|.+.|+.++++. ..++||+-|-+...+... -+.+...|.+.|.+
T Consensus 403 ~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~~~thG~~----~~~Ls~~a~R~~~I 478 (501)
T 4b63_A 403 VATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCNERTHGLS----DSLLSVLAVRGGEM 478 (501)
T ss_dssp ECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCCHHHHCTT----TTSSTTHHHHHHHH
T ss_pred ECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCCcccCCcc----hhhHHHHHHHHHHH
Confidence 99999987 2 23222 2455777888888776642 246699999654422211 14455567777765
Q ss_pred H
Q 013810 398 F 398 (436)
Q Consensus 398 a 398 (436)
+
T Consensus 479 ~ 479 (501)
T 4b63_A 479 V 479 (501)
T ss_dssp H
T ss_pred H
Confidence 4
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.88 E-value=2.1e-22 Score=174.04 Aligned_cols=150 Identities=24% Similarity=0.309 Sum_probs=127.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CC---------Ccc-----cHHHHHHHHHHHHh
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------SSF-----DDRLRHYATTQLSK 296 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l---------~~~-----~~~~~~~~~~~l~~ 296 (436)
+|+|||+|++|+++|..|++.+ .+|+++++.+ .+ +.+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999876 8999999853 33 223 47888889999999
Q ss_pred cCCEEEecceEEEeC--C--eEEEcCCcEEecceEEEecCCCCchhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccc
Q 013810 297 SGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDC 372 (436)
Q Consensus 297 ~gV~i~~~~v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~ 372 (436)
.||+++.+++++++. + .+.+++| ++++|.||+|+|..|+ +.+.++++++ +|+|.||+++| |+.|+|||+|||
T Consensus 69 ~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~-~g~i~vd~~~~-t~~~~i~a~GD~ 144 (180)
T 2ywl_A 69 YGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR-GAYIDTDEGGR-TSYPRVYAAGVA 144 (180)
T ss_dssp TTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE-TTEECCCTTCB-CSSTTEEECGGG
T ss_pred cCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCCCcc-CceEEeCCCCC-cCCCCEEEeecc
Confidence 999999988777764 2 3666777 8999999999999985 4567788888 89999999999 899999999999
Q ss_pred cccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 373 SGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
+..+ .+++..|..||+.||.||.....
T Consensus 145 ~~~~--------~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 145 RGKV--------PGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp GTCC--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcc--------hhhHHHHHHhHHHHHHHHHHHhh
Confidence 9862 23889999999999999987643
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.71 E-value=8e-19 Score=174.29 Aligned_cols=229 Identities=14% Similarity=0.093 Sum_probs=118.0
Q ss_pred cCCCcEEEEe-EeEeEeCCCCEEE-EEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCccccccccChHHHHHH
Q 013810 129 REPGSYFFLS-HCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 206 (436)
Q Consensus 129 ~~~~~~~~~~-~v~~id~~~~~v~-~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~ 206 (436)
+..++.++.+ .| .+..+++.+. +....++. ++.+|.||+|||..+..++++.. ....+.+.+.-+...
T Consensus 130 ~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g--------~~~a~~VVlAtGg~~~~~~~~~~-~~~~tGdgi~~a~~a 199 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL--------VEDVDKLVLATGGYSYLYEYSST-QSTNIGDGMAIAFKA 199 (472)
T ss_dssp HHTTCCEECCCEE-EEEEETTEEEEEEETTTEE--------ECCCSEEEECCCCCGGGSSSBSS-CTTCSCHHHHHHHHT
T ss_pred HhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCC--------eEEeeeEEECCCCCcccCccccC-CCCCchHHHHHHHHc
Confidence 3457777766 57 8766555542 11111222 57799999999998766554321 111111111111110
Q ss_pred HHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCcccHH
Q 013810 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDR 285 (436)
Q Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~l~~~~~~ 285 (436)
.. .+..+.- - .....++++|+| +++++..+...+ ..+ +..++ ++++.+++.
T Consensus 200 Ga------~~~d~e~---~--q~~p~~~~~ggg--~~~~ae~~~~~G--------------~~~-v~~~g~rf~~~~~~~ 251 (472)
T 2e5v_A 200 GT------ILADMEF---V--QFHPTVTSLDGE--VFLLTETLRGEG--------------AQI-INENGERFLFNYDKR 251 (472)
T ss_dssp TC------CEECTTC---E--EEEEEEECGGGC--CEECCTHHHHTT--------------CEE-EETTCCCGGGGTCTT
T ss_pred CC------CEeCCcc---e--EEEeEEEccCCC--ceeeehhhcCCc--------------eEE-ECCCCCCCCccCCcc
Confidence 00 0000000 0 000134556766 777777666544 555 55554 455544443
Q ss_pred H--------HHHHHHHHHhcCCEEEecceEEEeCCeEEEcCCcEEe-cceEEEecCCCCchhcccCCCCCCCCCcEEeCC
Q 013810 286 L--------RHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVP-YGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDE 356 (436)
Q Consensus 286 ~--------~~~~~~~l~~~gV~i~~~~v~~i~~~~v~~~~g~~i~-~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~ 356 (436)
. .+.+.+.+++.+. ++.+. ..++. + .++++ .|.++++.|..|+.+++..+......|.|.||+
T Consensus 252 ~el~~rd~v~~~i~~~~~~~~~-v~ld~-~~~~~----~--~~~~~~~~~~~~~~G~dp~~~i~v~p~~~~~~GGI~vd~ 323 (472)
T 2e5v_A 252 GELAPRDILSRAIYIEMLKGHK-VFIDL-SKIED----F--ERKFPVVAKYLARHGHNYKVKIPIFPAAHFVDGGIRVNI 323 (472)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCC-EEEEC-TTCTT----H--HHHCHHHHHHHHHTTCCTTSCEECEEEEEEESCEEECCT
T ss_pred cCcCchhHHHHHHHHHHHhCCc-EEEec-cchHH----H--HHHhHHHHHHHHHhCcCcccceEeehhhceeCCCeEECC
Confidence 2 5566666766653 33321 00000 1 01233 477788889998722221111122357899999
Q ss_pred CCCCCCCCCEEEeccccccccCCCC-ccCCccHHHHHHHHHHHHhhhhhh
Q 013810 357 WLRVPSVQDVFAVGDCSGYLESTGK-TVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 357 ~~~~t~~~~Vya~GD~~~~~~~~~~-~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
++| |+.|+|||+|||++... .|. +........+...|+.|+++|...
T Consensus 324 ~~~-t~ipgLyAaGd~a~~~~-hg~~rl~~~sl~~~~v~G~~a~~~~a~~ 371 (472)
T 2e5v_A 324 RGE-SNIVNLYAIGEVSDSGL-HGANRLASNSLLEGLVFGINLPRYVDSS 371 (472)
T ss_dssp TCB-CSSBTEEECGGGEECSS-STTSCCTTHHHHHHHHHHHHGGGTTTSC
T ss_pred CCc-cccCCEEecchhccccc-CCCCCCCcccHHHHHHHHHHHHHHHHhh
Confidence 999 89999999999988211 111 111223344555577777777643
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.63 E-value=2.9e-19 Score=169.31 Aligned_cols=255 Identities=11% Similarity=-0.019 Sum_probs=137.7
Q ss_pred CCCcEEEECCchHHHHHHHhcc--cCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 61 EKPRVVVLGSGWAGCRLMKGID--TSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~--~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
..+||+|||||||||+||++|+ +.|++|+|||+.+.++......+.. ++...+..... .+....++.+...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~---~~~~~l~~~~~----~~~~e~Gv~~~~~ 136 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL---FSAMVMRKPAH----LFLQELEIPYEDE 136 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT---CCCEEEETTTH----HHHHHTTCCCEEC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc---CCHHHHHHHHH----HHHHHcCCEEEEC
Confidence 3579999999999999999996 4699999999987755432221111 11111111111 1122234433211
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCCcc-ccccccChHHHHHHHHHHHHhcccc
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLS 217 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (436)
+.. ....+.++++++..++.+.++|... ......... ..
T Consensus 137 ------------------~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------~~ 176 (326)
T 3fpz_A 137 ------------------GDY--------VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLV--------------TR 176 (326)
T ss_dssp ------------------SSE--------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE--------------EE
T ss_pred ------------------Ccc--------eecceeEEEEcchhhhccccccceeecccccceee--------------cc
Confidence 110 2233444556666666667777541 111110000 00
Q ss_pred CCCCCChhhhcccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhc
Q 013810 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKS 297 (436)
Q Consensus 218 ~~p~~~~~~~~~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~ 297 (436)
..+ ....++++|+|+|.++++.|..+...+ .++++..+......... +...
T Consensus 177 ~~~------~~~~~~v~viggg~~av~~a~~~~~~~--------------~~v~i~~~~~~~~~~~~---------~~~~ 227 (326)
T 3fpz_A 177 PPT------EKGEVTVAGVVTNWTLVTQAHGTQCAM--------------DPNVIELAGYKNDGTRD---------LSQK 227 (326)
T ss_dssp SSC------SSSSCEEEEEEEEEHHHHTCTTSSSCC--------------CCEEEEESCBCTTSSBC---------TTSC
T ss_pred CCc------ccCCCEEEEEccCceeeehhhhhhhcc--------------CcEEEEeeccccccccc---------ceee
Confidence 000 023358999999999999987776544 77888776432211100 0000
Q ss_pred CCEEEecceEEEeCCe-EEEc--CCcEEecceEEEecCCCCchhcccCCCCCCCCCcEEeCCCCCCCCCCCEEEeccccc
Q 013810 298 GVRLVRGIVKDVDSQK-LILN--DGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGRIGIDEWLRVPSVQDVFAVGDCSG 374 (436)
Q Consensus 298 gV~i~~~~v~~i~~~~-v~~~--~g~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~Vya~GD~~~ 374 (436)
. ..+.+..+.. .... ....+.+|.++.+.|.++.... .. .+.|.+|..++ |+.|+|||+||+++
T Consensus 228 -~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~-e~~iv~~~~~~-t~vpGv~aaGDaa~ 294 (326)
T 3fpz_A 228 -H----GVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMN------HA-EHDVVIHSGAY-AGVDNMYFAGMEVA 294 (326)
T ss_dssp -C----CEEEECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHH------HH-HHHHHHHCEEC-TTSBTEEECTHHHH
T ss_pred -c----ceEEEEecceeeEeecceeEEEecCceeeecceeccccc------cc-CCeEEECCCeE-ECCCCEEEEchHhc
Confidence 0 0111111110 0000 1123567777777887775211 01 24577788888 99999999999986
Q ss_pred cccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 375 YLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 375 ~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
..... ...-+....++.+|+.||+.|..+.
T Consensus 295 ~v~g~--~rmGp~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 295 ELDGL--NRMGPTFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp HHHTC--CBCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCC--CcCchHHHHHHHHHHHHHHHHHHHh
Confidence 32210 0011234567789999999998653
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.60 E-value=3.8e-16 Score=151.65 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=33.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
++||+|||||+||++||..|++.|.+|+|||+.+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998754
No 98
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.59 E-value=4.8e-15 Score=133.08 Aligned_cols=150 Identities=15% Similarity=0.108 Sum_probs=107.4
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-C-----------------CCc-------ccHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-----------------LSS-------FDDRL 286 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~-----------------l~~-------~~~~~ 286 (436)
+|+|||+|++|+++|..|++.+ .+|+++++.. . ... ....+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 7999999999999999999876 8999999851 0 000 11366
Q ss_pred HHHHHHHHHhc-CCEEEecceEEEeC--C---eEEEcCCcEEecceEEEecCCCCch---------------------h-
Q 013810 287 RHYATTQLSKS-GVRLVRGIVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPST---------------------L- 338 (436)
Q Consensus 287 ~~~~~~~l~~~-gV~i~~~~v~~i~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~---------------------~- 338 (436)
.+.+.+.+++. |++++..+++++.. + .|.+.+|+++.+|.||+|+|...+. +
T Consensus 71 ~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~ 150 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLL 150 (232)
T ss_dssp HHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHH
T ss_pred HHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhC
Confidence 67788888886 99999666887753 3 4667888889999999999995431 1
Q ss_pred --cccCCCCCCCCC--------c-------EEeCC------CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHH
Q 013810 339 --VKSLDLPKSPGG--------R-------IGIDE------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQL 395 (436)
Q Consensus 339 --~~~~~l~~~~~G--------~-------i~vd~------~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g 395 (436)
+.+.+++++... . ..+.. .+..|++|+|||+|||+ . ......|+.||
T Consensus 151 ~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~---------~g~~~~~~~~g 220 (232)
T 2cul_A 151 EDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-R---------EGDYARMSEEG 220 (232)
T ss_dssp HHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-S---------CCCHHHHHHHH
T ss_pred HHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-c---------CccHHHHHHHH
Confidence 223344332111 0 11110 12237999999999999 5 45788899999
Q ss_pred HHHHhhhhhh
Q 013810 396 HLFQKPSFLL 405 (436)
Q Consensus 396 ~~aa~~i~~~ 405 (436)
+.+|.+|...
T Consensus 221 ~~~a~~i~~~ 230 (232)
T 2cul_A 221 KRLAEHLLHE 230 (232)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999764
No 99
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.31 E-value=7.4e-12 Score=125.93 Aligned_cols=121 Identities=15% Similarity=0.127 Sum_probs=76.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC-cceec---chhhhh-----------hcCc---------ccccc--
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN-HMVFT---PLLAST-----------CVGT---------LEFRS-- 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~-~~~~~---~~~~~~-----------~~~~---------~~~~~-- 115 (436)
.+||+|||||+||++||..|++.|.+|+|||++. .+... |...+. ..+. ..+..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 4899999999999999999999999999999874 21110 000000 0000 00000
Q ss_pred ------cc--------cchhhcchhhhcC-CCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCC
Q 013810 116 ------VA--------EPIARIQPAISRE-PGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180 (436)
Q Consensus 116 ------~~--------~~~~~~~~~~~~~-~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~ 180 (436)
.. ..+.......... .++.++.++|+.+..+++.+.-....+|. .+.+|+||+|||.
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~--------~i~AdaVVLATG~ 178 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGV--------EYKTKAVVVTTGT 178 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSC--------EEECSEEEECCTT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCc--------EEEeCEEEEccCC
Confidence 00 0111111112233 58888888999988766655322234565 8999999999999
Q ss_pred CCCCCCCCCC
Q 013810 181 EASTFGIHGV 190 (436)
Q Consensus 181 ~~~~~~i~g~ 190 (436)
.+..+.++|.
T Consensus 179 ~s~~~~~~G~ 188 (637)
T 2zxi_A 179 FLNGVIYIGD 188 (637)
T ss_dssp CBTCEEEETT
T ss_pred CccCceeccc
Confidence 8887777765
No 100
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.19 E-value=3.2e-11 Score=107.97 Aligned_cols=119 Identities=14% Similarity=0.107 Sum_probs=73.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCccccccc-----------ccchhhcchhhhcC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-----------AEPIARIQPAISRE 130 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 130 (436)
.+||+|||||++|+++|..|++.|.+|+|||+.......+..+. ..+ .....+ ...+........+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~-~~~-~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPP-KPP-FPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCC-CSC-CCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcc-ccc-cchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999999732111000000 000 000000 00122222222333
Q ss_pred -CCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCCCC
Q 013810 131 -PGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 190 (436)
Q Consensus 131 -~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g~ 190 (436)
.++.++..+|+.++.+++.+......+|. ++.+|+||+|+|........+|.
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~--------~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWEGP--------PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETTSC--------CEECSEEEECCTTCSSCEEEETT
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECCCC--------EEECCEEEECCCCChhhceecCC
Confidence 48888878899888765554322234565 79999999999997655444454
No 101
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.17 E-value=4e-11 Score=121.06 Aligned_cols=121 Identities=16% Similarity=0.169 Sum_probs=75.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc-ceec---chhhh-----------hhcCc---------ccccc--
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLAS-----------TCVGT---------LEFRS-- 115 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~-~~~~---~~~~~-----------~~~~~---------~~~~~-- 115 (436)
.+||+|||||+||++||..|++.|.+|+|||++.. +... |...+ ...+. ..+..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 58999999999999999999999999999998742 1110 00000 00000 00000
Q ss_pred ------cc--------cchhhcchhhhcC-CCcEEEEeEeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCC
Q 013810 116 ------VA--------EPIARIQPAISRE-PGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180 (436)
Q Consensus 116 ------~~--------~~~~~~~~~~~~~-~~~~~~~~~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~ 180 (436)
.. ..+.......... .++.++.++|+.+..+++.+......+|. .+.+|+||+|||.
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~--------~I~Ad~VVLATGt 179 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGL--------KFRAKAVVLTVGT 179 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSE--------EEEEEEEEECCST
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCC--------EEECCEEEEcCCC
Confidence 00 0111111122233 68888888999997665554322233554 7999999999999
Q ss_pred CCCCCCCCCC
Q 013810 181 EASTFGIHGV 190 (436)
Q Consensus 181 ~~~~~~i~g~ 190 (436)
.+..+.++|.
T Consensus 180 ~s~~~~i~G~ 189 (651)
T 3ces_A 180 FLDGKIHIGL 189 (651)
T ss_dssp TTCCEEECC-
T ss_pred CccCccccCc
Confidence 9887777775
No 102
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.12 E-value=7.9e-11 Score=100.97 Aligned_cols=111 Identities=17% Similarity=0.152 Sum_probs=70.9
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEeEe
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAG 142 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 142 (436)
++|+|||||++|+++|..|++.|.+|+|||+.+.............+.+. ......+.+......+..++.++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~gv~v~~~~v~~ 80 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLD-EPSGEELLRRLEAHARRYGAEVRPGVVKG 80 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTT-CCCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcC-CCCHHHHHHHHHHHHHHcCCEEEeCEEEE
Confidence 68999999999999999999999999999998643211000000001000 00011222222333445678888888888
Q ss_pred EeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 143 IDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 143 id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
++.+.+.+.+.. .++ ++.+|+||+|+|..|..
T Consensus 81 i~~~~~~~~v~~-~~g---------~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 81 VRDMGGVFEVET-EEG---------VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp EEECSSSEEEEC-SSC---------EEEEEEEEECCTTCCHH
T ss_pred EEEcCCEEEEEE-CCC---------EEEECEEEECCCCCCCc
Confidence 887655555442 233 68999999999998744
No 103
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.05 E-value=3.4e-10 Score=104.53 Aligned_cols=158 Identities=16% Similarity=0.149 Sum_probs=104.0
Q ss_pred cEEEECCChHHHHHHHHHHHH-HHHHHHhhhcCCCCccEEEEEeCCCCCC-c----------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANEILS-S---------------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~~~l~-~---------------------------- 281 (436)
+|+|||+|++|+.+|..|++. + .+|+++++.+... .
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G--------------~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPN--------------VQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTT--------------SCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CEEEECccHHHHHHHHHHHHcCC--------------CeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 799999999999999999874 4 8999999853210 0
Q ss_pred ----------ccHHHHHHHHHHHHh-cCCEEEecc-eEEEe--CC---eEEEc---------CC-----cEEecceEEEe
Q 013810 282 ----------FDDRLRHYATTQLSK-SGVRLVRGI-VKDVD--SQ---KLILN---------DG-----TEVPYGLLVWS 330 (436)
Q Consensus 282 ----------~~~~~~~~~~~~l~~-~gV~i~~~~-v~~i~--~~---~v~~~---------~g-----~~i~~D~vi~a 330 (436)
...++...+.+.+.+ .||+++.+. +.++. ++ +|.+. +| .++++|.||+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123444455566655 699999984 87774 33 34442 32 57999999999
Q ss_pred cCCCCc--h----hcccCC--CCCCCCCcEEeCC-------CCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHH
Q 013810 331 TGVGPS--T----LVKSLD--LPKSPGGRIGIDE-------WLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQL 395 (436)
Q Consensus 331 ~G~~p~--~----~~~~~~--l~~~~~G~i~vd~-------~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g 395 (436)
+|..+. . ++..++ +.+.....+.++. ..+ +..|++|++||++.. ..+.+...+.+..+..+|
T Consensus 187 tG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~-~~~p~i~a~G~~~~~--~~g~~~~gp~~~~~~~sG 263 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTR-EVVPGMIVTGMEVAE--IDGAPRMGPTFGAMMISG 263 (284)
T ss_dssp CCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCE-EEETTEEECTHHHHH--HHTCEECCSCCHHHHHHH
T ss_pred CCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccc-cccCCEEEEeeehhh--hcCCCCcChHHHHHHHhH
Confidence 998765 2 222222 1222222233332 234 577999999998742 122222334677889999
Q ss_pred HHHHhhhhhhc
Q 013810 396 HLFQKPSFLLA 406 (436)
Q Consensus 396 ~~aa~~i~~~~ 406 (436)
+.+|.+|....
T Consensus 264 ~~~a~~i~~~l 274 (284)
T 1rp0_A 264 QKAGQLALKAL 274 (284)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 104
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.01 E-value=4.5e-10 Score=109.27 Aligned_cols=38 Identities=24% Similarity=0.244 Sum_probs=33.2
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
+.++||+|||||+||++||..|++.|.+|+|||+.+..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 34589999999999999999999999999999998764
No 105
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.96 E-value=6.1e-10 Score=109.16 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecC--------CCCc-hh--cccCCCCCCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTG--------VGPS-TL--VKSLDLPKSP 348 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G--------~~p~-~~--~~~~~l~~~~ 348 (436)
.+...+...+++.| +++.++ |++|+. + .|.+.+|+++.+|.||+|+| +.|+ +. .+.++.. ..
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~-~~ 282 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG-HG 282 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC-CC
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC-CC
Confidence 34555666666778 999985 988864 2 35667888899999999999 7776 21 1111111 12
Q ss_pred CCcEEeCCCCCCCCCCCEEEeccccc
Q 013810 349 GGRIGIDEWLRVPSVQDVFAVGDCSG 374 (436)
Q Consensus 349 ~G~i~vd~~~~~t~~~~Vya~GD~~~ 374 (436)
...++|+..++ +..++||+.||+..
T Consensus 283 ~~~~kv~~~~~-~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 283 GQGLKILIHVR-GAEAGIECVGDGIF 307 (431)
T ss_dssp CCEEEEEEEEE-SCCTTEEEEBSSSS
T ss_pred cceEEEEEEEC-CCCcCceEcCCCCE
Confidence 23489999999 88899999999843
No 106
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.96 E-value=1.7e-09 Score=99.73 Aligned_cols=121 Identities=15% Similarity=0.071 Sum_probs=69.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccC-CCeEEEEcCCCcceecchhhh-h-------------h--cCccccc--------c
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFTPLLAS-T-------------C--VGTLEFR--------S 115 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~-g~~v~lie~~~~~~~~~~~~~-~-------------~--~~~~~~~--------~ 115 (436)
.++||+|||||++|++||..|++. |.+|+|||+.+.........+ . + .|..... .
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 347999999999999999999997 999999999875421100000 0 0 0000000 0
Q ss_pred cccchhhcchhhhcCCCcEEEEe-EeEeEeCCCCEE---EEEEe----c--CCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 116 VAEPIARIQPAISREPGSYFFLS-HCAGIDTDNHVV---HCETV----T--DELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~id~~~~~v---~~~~~----~--~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
.......+.....+..++.++.+ +|+.++.+.+.+ .+... . ++. ......+.+|.||+|+|..+..
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~---~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQS---CMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSS---CCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccc---cCceEEEECCEEEECCCCchHH
Confidence 00011112222334468888775 888887665543 22210 0 110 0001278999999999987654
No 107
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.91 E-value=1.3e-09 Score=108.79 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec------chhhhh--hcCcc------cc---ccc-ccchh
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------PLLAST--CVGTL------EF---RSV-AEPIA 121 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~------~~~~~~--~~~~~------~~---~~~-~~~~~ 121 (436)
...++|+|||||++|+++|..|++.|++|+|||+.+..... +..... ..|.. .. ..+ ...+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 34689999999999999999999999999999998754211 100000 00000 00 000 01122
Q ss_pred hcchhhhcCCCcEEEEe-EeEeEeCC---CCEEEEEEe-c-CCcccCCCCceeeeccEEEEeCCCCCCCCCCCC
Q 013810 122 RIQPAISREPGSYFFLS-HCAGIDTD---NHVVHCETV-T-DELRTLEPWKFKISYDKLVIALGAEASTFGIHG 189 (436)
Q Consensus 122 ~~~~~~~~~~~~~~~~~-~v~~id~~---~~~v~~~~~-~-~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~g 189 (436)
..........++.++.+ +|++++.+ .+.+.+... . +|. +.++.+|+||+|+|..+....+.+
T Consensus 170 ~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~------~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQ------LASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHH------HHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCC------EEEEEcCEEEECCCCCcccccccc
Confidence 22222233367887765 88888763 223333221 1 341 116899999999999876654443
No 108
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.90 E-value=2.2e-09 Score=107.53 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=40.2
Q ss_pred EEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 352 IGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 352 i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
|.+|+++|+.+.+|+|+|||++++ ...+..|..+|..+|+.|....
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~---------a~gi~~Aa~~G~~~a~~i~~~~ 542 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGY---------AGGILSAGIDGIKVAEAVARDI 542 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTS---------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCCh---------hhHHHHHHHHHHHHHHHHHHHh
Confidence 678888994489999999999997 7788999999999999998654
No 109
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.88 E-value=3.1e-09 Score=104.68 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=33.8
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.+.+||+|||||+||++||+.|++.|.+|+|||+.+..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 34589999999999999999999999999999987643
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.87 E-value=2.6e-09 Score=102.90 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=33.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.+||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 579999999999999999999999999999987654
No 111
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.84 E-value=1.4e-09 Score=104.89 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=33.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.++||+||||||||++||+.|++.|++|+|||+.+.+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999987654
No 112
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.82 E-value=3.3e-09 Score=107.62 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=33.6
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
|+.+||+|||||+||+++|..|++.|++|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 3468999999999999999999999999999998743
No 113
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.79 E-value=5.5e-09 Score=105.53 Aligned_cols=120 Identities=16% Similarity=0.276 Sum_probs=73.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc-ceec---chhhh-----------hhcCc---------ccccc-
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLAS-----------TCVGT---------LEFRS- 115 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~-~~~~---~~~~~-----------~~~~~---------~~~~~- 115 (436)
..+||+|||||+||++||..|++.|.+|+|||+... +... |...+ ...+. ..+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 358999999999999999999999999999998742 1110 10000 00000 00000
Q ss_pred -------c-----cc---chhh-cchhhhcCCCcEEEEeEeEeEeCCCCEEE-EEEecCCcccCCCCceeeeccEEEEeC
Q 013810 116 -------V-----AE---PIAR-IQPAISREPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIAL 178 (436)
Q Consensus 116 -------~-----~~---~~~~-~~~~~~~~~~~~~~~~~v~~id~~~~~v~-~~~~~~g~~~~~~~~~~~~~d~lViAt 178 (436)
. .. .+.. +...+....++.++.++|+.+..+++.+. +. ..+|. .+.+|+||+||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~-t~~G~--------~i~Ad~VVLAT 170 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVT-VRSGR--------AIQAKAAILAC 170 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE-ETTSC--------EEEEEEEEECC
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEE-ECCCc--------EEEeCEEEECc
Confidence 0 00 1111 11122223588888888988877666654 33 34565 89999999999
Q ss_pred CCCCCCCCCCC
Q 013810 179 GAEASTFGIHG 189 (436)
Q Consensus 179 G~~~~~~~i~g 189 (436)
|..+..+.++|
T Consensus 171 G~~s~~~i~~G 181 (641)
T 3cp8_A 171 GTFLNGLIHIG 181 (641)
T ss_dssp TTCBTCEEEET
T ss_pred CCCCCccceee
Confidence 99876554444
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.78 E-value=9.4e-09 Score=99.62 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
++||+|||||+||+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999987643
No 115
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.73 E-value=2.8e-08 Score=96.23 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=33.8
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+..++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3457999999999999999999999999999998764
No 116
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.72 E-value=6.2e-09 Score=103.80 Aligned_cols=146 Identities=19% Similarity=0.213 Sum_probs=97.4
Q ss_pred eccEEEEeCCCCCCCCCCCCCc-cccccccChHHHHHH-HHHHHHhccccCCCCCChhhhcccCcEEEECCChHHHHHHH
Q 013810 170 SYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEI-RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 247 (436)
Q Consensus 170 ~~d~lViAtG~~~~~~~i~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~vvViG~G~~g~e~A~ 247 (436)
.||.+++++|++++.+++++.+ +.++......+.... ..++... ..... ......+|+|||||++|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQP-VYQQG------QACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSG-GGGGG------TTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccc-cccCc------cccCCCCEEEECccHHHHHHHH
Confidence 4788999999998776666544 344455455554443 1111100 00000 0122348999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------ccc----------------------------HHHHHHHHHH
Q 013810 248 ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------SFD----------------------------DRLRHYATTQ 293 (436)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------~~~----------------------------~~~~~~~~~~ 293 (436)
.|++.| .+|+|+++.+.+. ..+ .++.+.+.+.
T Consensus 110 ~La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 999876 8999999853221 000 4555667777
Q ss_pred HHhcCCEEEecc-eEEEeC-----C--eEEE--c-CC--cEEecceEEEecCCCCc
Q 013810 294 LSKSGVRLVRGI-VKDVDS-----Q--KLIL--N-DG--TEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 294 l~~~gV~i~~~~-v~~i~~-----~--~v~~--~-~g--~~i~~D~vi~a~G~~p~ 336 (436)
+++.||+++.++ |.+++. + .|.+ . +| +++.+|.||.|+|..+.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 888899999994 888863 1 4555 3 56 47999999999998775
No 117
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.71 E-value=9.4e-09 Score=100.30 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+||+|||||+||+++|..|++.|++|+|||+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999975
No 118
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.71 E-value=3.5e-08 Score=95.88 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=33.6
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
..++||+|||||++|+++|+.|++.|++|+|||+.+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34689999999999999999999999999999997653
No 119
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.70 E-value=2.5e-08 Score=94.12 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=32.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 36899999999999999999999999999999864
No 120
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.70 E-value=2.9e-08 Score=96.13 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=33.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999999765
No 121
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.70 E-value=1.5e-09 Score=110.93 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=34.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
..+||+|||||+||++||..|++.|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 35799999999999999999999999999999987643
No 122
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.67 E-value=2.5e-08 Score=94.55 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=32.3
Q ss_pred CcEEEECCchHHHHHHHhccc---CCCeEEEEcCCCcc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHM 97 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~~~ 97 (436)
+||+|||||++|+++|+.|++ .|++|+|||+++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 589999999999999999999 99999999998643
No 123
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.66 E-value=5.8e-08 Score=92.63 Aligned_cols=62 Identities=13% Similarity=0.179 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C---eEEEcCC--cEEecceEEEecCCCCchhcccC-CC
Q 013810 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDG--TEVPYGLLVWSTGVGPSTLVKSL-DL 344 (436)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~---~v~~~~g--~~i~~D~vi~a~G~~p~~~~~~~-~l 344 (436)
+..+.+.+.+.+++.|++++.++ |+++.. + .|.+.+| .++.+|.||+|+|.....+++.+ |+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~ 219 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGI 219 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCC
Confidence 35777888888999999999884 888753 2 3566677 47999999999998876666666 54
No 124
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.66 E-value=1.7e-08 Score=99.57 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=32.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++||+|||||+||+++|..|++.|++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 47999999999999999999999999999999764
No 125
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.64 E-value=4.7e-08 Score=98.50 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+++|+|||||++||++|+.|++.|++|+|||+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 357999999999999999999999999999998764
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.64 E-value=3.2e-08 Score=100.18 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
+++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 4579999999999999999999999999999987543
No 127
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.63 E-value=2.4e-08 Score=96.49 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
++||+|||||+||+++|..|++.|++|+|||+.+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998743
No 128
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.63 E-value=5.4e-08 Score=94.34 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=32.3
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
+||+|||||||||++|..|++.|++|+|||+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999987643
No 129
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.62 E-value=1.9e-08 Score=91.63 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=34.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
..||+|||||||||+||..|++.|++|+|||+.+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 3789999999999999999999999999999987654
No 130
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.58 E-value=9.2e-08 Score=92.42 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 36899999999999999999999999999998764
No 131
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.56 E-value=5.5e-08 Score=97.41 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++||+|||||+||+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 4799999999999999999999999999999986
No 132
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.56 E-value=9.4e-08 Score=97.05 Aligned_cols=36 Identities=28% Similarity=0.268 Sum_probs=33.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.+||||||||+|||+||+.|++.|++|+|||+.+..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999998754
No 133
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.55 E-value=2e-07 Score=87.21 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=33.0
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~ 97 (436)
.+||+|||||+||++||+.|++. |++|+|||+.+..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 57999999999999999999997 9999999998654
No 134
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.54 E-value=6.1e-07 Score=90.96 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=33.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.+||+|||||+|||+||..|++.|++|+|||+.+..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 579999999999999999999999999999998754
No 135
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.53 E-value=6.1e-08 Score=93.19 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 34799999999999999999999999999999875
No 136
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.53 E-value=1.1e-07 Score=91.46 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35799999999999999999999999999999874
No 137
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.52 E-value=1.7e-07 Score=91.88 Aligned_cols=36 Identities=17% Similarity=0.315 Sum_probs=33.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
..+||||||||++|+++|+.|++.|+ +|+|||+.+.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 45799999999999999999999999 9999998754
No 138
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.52 E-value=1.2e-07 Score=94.49 Aligned_cols=37 Identities=24% Similarity=0.280 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
++++|+||||||+||++|..|++.|++|+|||+.+..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4589999999999999999999999999999987643
No 139
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.51 E-value=7.3e-08 Score=94.33 Aligned_cols=94 Identities=22% Similarity=0.419 Sum_probs=71.1
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---Cccc---------HHHHHHHHHHHHhcC
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSFD---------DRLRHYATTQLSKSG 298 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~~~---------~~~~~~~~~~l~~~g 298 (436)
|+|||||+|+.|+.+|..|++.+ ++.+|+|+++.+.. |.+. .++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 38999999999999999998654 34899999986522 1110 111111234566789
Q ss_pred CEEEecceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 299 VRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 299 V~i~~~~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
|+++.+++++|+. +.|++++|+++++|.+|+|+|.++.
T Consensus 71 v~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred cEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 9999999999975 5799999999999999999998653
No 140
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=1.3e-07 Score=94.15 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=33.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
..++|+||||||+||++|..|++.|++|+|||+.+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4589999999999999999999999999999987543
No 141
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.51 E-value=2.2e-07 Score=94.32 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=33.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccC------CCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~------g~~v~lie~~~~~ 97 (436)
+.+||+|||||+||+++|+.|++. |++|+|||+.+..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 348999999999999999999998 9999999998654
No 142
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.50 E-value=2.8e-07 Score=95.48 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..+||+|||||+||+++|+.|++.|.+|+|||+.+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34899999999999999999999999999999864
No 143
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.50 E-value=5.6e-08 Score=93.28 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.++||+|||||++|+++|++|+ +|++|+|||+.+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 4589999999999999999999 59999999998543
No 144
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.50 E-value=1.6e-07 Score=91.35 Aligned_cols=37 Identities=14% Similarity=0.256 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCe-EEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~-v~lie~~~~~ 97 (436)
..++|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 357999999999999999999999999 9999987653
No 145
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.50 E-value=1.4e-07 Score=95.67 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
..+||||||||+|||+||+.|++.|.+|+|||+.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3579999999999999999999999999999998754
No 146
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.48 E-value=1.8e-07 Score=90.60 Aligned_cols=95 Identities=25% Similarity=0.312 Sum_probs=71.1
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC--CcccHHH---------HHHHHHHHHhcC
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL--SSFDDRL---------RHYATTQLSKSG 298 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l--~~~~~~~---------~~~~~~~l~~~g 298 (436)
+|||+|||+|+.|+.+|..|.+.+ ++.+|+|+++.+.. ......+ ...-.+.+.++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 469999999999999999997654 34799999986421 1110110 001123456689
Q ss_pred CEEEecceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 299 VRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 299 V~i~~~~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
|+++.++++.|+. +.+.+.+|+++.+|.+++|+|.+++
T Consensus 70 v~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 70 IQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccc
Confidence 9999999999975 5688899999999999999999876
No 147
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.47 E-value=1.6e-07 Score=89.82 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++||+|||||++|+++|+.|++.|++|+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 37999999999999999999999999999998753
No 148
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.47 E-value=5.5e-07 Score=86.63 Aligned_cols=91 Identities=18% Similarity=0.404 Sum_probs=71.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHH-------------HHHHHHHhcC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKSG 298 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~-------------~~~~~l~~~g 298 (436)
+|+|||+|+.|+.+|..|.. .+.+|+|+++++.++...+.+.. ...+.+++.|
T Consensus 11 ~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~ 76 (385)
T 3klj_A 11 KILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNN 76 (385)
T ss_dssp SEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTT
T ss_pred CEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCC
Confidence 89999999999999999943 34899999997544322222222 2345667789
Q ss_pred CEEEec-ceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 299 VRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 299 V~i~~~-~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
|+++.+ +|++++. ..|++++|+++.+|.+|+|+|.+|.
T Consensus 77 i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 77 IKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp CEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 999998 5998875 5788999999999999999998876
No 149
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.47 E-value=2.9e-07 Score=89.08 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=32.6
Q ss_pred CCCcEEEECCchHHHHHHHhccc-CC-CeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDT-SL-YDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~-~g-~~v~lie~~~ 95 (436)
.++||+|||||++|+++|..|++ .| ++|+|||+.+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 35799999999999999999999 99 9999999876
No 150
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.46 E-value=3.1e-07 Score=92.59 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhccc---CCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~ 95 (436)
.++|+|||||+||+++|..|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999999 999999999865
No 151
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=1.8e-07 Score=92.16 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=71.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+.+. +. . . ..+........+..++.++.+ +|
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-----~~-----~-~----~~~~~~l~~~l~~~Gv~i~~~~~V 231 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-----PT-----M-D----LEVSRAAERVFKKQGLTIRTGVRV 231 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-----TT-----S-C----HHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-----cc-----c-C----HHHHHHHHHHHHHCCCEEEECCEE
Confidence 3789999999999999999999999999999986531 10 0 0 011111112233457888775 88
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
+.++.+.+.+.+.. .++. ++.+|.||+|+|..|+.+.
T Consensus 232 ~~i~~~~~~v~v~~-~~g~--------~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 232 TAVVPEAKGARVEL-EGGE--------VLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEECCTT
T ss_pred EEEEEeCCEEEEEE-CCCe--------EEEcCEEEECcCCCcCCCC
Confidence 88887666665543 3454 7999999999999887643
No 152
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=3.7e-07 Score=89.80 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=70.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+.+... . . ...+........+..++.++.+ +|
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----~----~-----~~~~~~~l~~~l~~~gv~i~~~~~v 214 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-----Y----L-----DKEFTDVLTEEMEANNITIATGETV 214 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----T----C-----CHHHHHHHHHHHHTTTEEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-----c----C-----CHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 479999999999999999999999999999998652110 0 0 0112222222345578998885 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+...+.. ++. ++.+|.||+|+|.+|+.+
T Consensus 215 ~~i~~~~~v~~v~~--~~~--------~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 215 ERYEGDGRVQKVVT--DKN--------AYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp EEEECSSBCCEEEE--SSC--------EEECSEEEECSCEEESCG
T ss_pred EEEEccCcEEEEEE--CCC--------EEECCEEEECcCCCCChH
Confidence 88886633222222 444 799999999999988754
No 153
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.45 E-value=6.2e-07 Score=82.67 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=72.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----------CCc----ccHHHHHHHHHHHHhc
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----------LSS----FDDRLRHYATTQLSKS 297 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----------l~~----~~~~~~~~~~~~l~~~ 297 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++... .+. ...++.+.+.+.+.+.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRAR--------------KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERY 69 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999999866 89999997421 111 1246667777777776
Q ss_pred -CCEEEecceEEEeCC----eEEEcCCcEEecceEEEecCCCCc
Q 013810 298 -GVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 298 -gV~i~~~~v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++++.+++.+++.+ .|.+.+|+++.+|.||+|+|..|.
T Consensus 70 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 70 PTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred CCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 799988888888643 577788989999999999999876
No 154
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.43 E-value=2.9e-07 Score=92.88 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=33.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.++|+||||||+|+++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999987643
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.43 E-value=3.9e-07 Score=90.01 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=71.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|||+.+.+.- . . ...+........+..++.++.+ +|
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~-----~-----~~~~~~~l~~~l~~~gV~i~~~~~v 233 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----Q-----G-----DPETAALLRRALEKEGIRVRTKTKA 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-----CHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----c-----c-----CHHHHHHHHHHHHhcCCEEEcCCEE
Confidence 36899999999999999999999999999999865211 0 0 0111122222234468888876 88
Q ss_pred EeEeCCCCEEEEEEecC--CcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTD--ELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~--g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
+.++.+.+.+.+....+ |+ +.++.+|.||+|+|.+|+...
T Consensus 234 ~~i~~~~~~~~v~~~~~~~g~------~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 234 VGYEKKKDGLHVRLEPAEGGE------GEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEEEETTEEEEEEEETTCCS------CEEEEESEEEECSCEEESCTT
T ss_pred EEEEEeCCEEEEEEeecCCCc------eeEEEcCEEEECCCcccCCCC
Confidence 88876655544432213 42 126899999999999887653
No 156
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.41 E-value=3.4e-07 Score=89.71 Aligned_cols=94 Identities=27% Similarity=0.444 Sum_probs=72.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---Cc---------ccHHHHHHHHHHHHhcCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SS---------FDDRLRHYATTQLSKSGV 299 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~---------~~~~~~~~~~~~l~~~gV 299 (436)
+|+|||||+.|+.+|..|++.. ..+.+|+|+++.+.. +. ...++...+.+.+++.||
T Consensus 6 ~vvIIGgG~aGl~aA~~L~~~~-----------~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv 74 (437)
T 3sx6_A 6 HVVILGAGTGGMPAAYEMKEAL-----------GSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGI 74 (437)
T ss_dssp EEEEECCSTTHHHHHHHHHHHH-----------GGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTC
T ss_pred cEEEECCcHHHHHHHHHHhccC-----------CCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCC
Confidence 8999999999999999998732 124899999996532 11 112222334567778899
Q ss_pred EEEecceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 300 RLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 300 ~i~~~~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++.+++++++. +.|.+++|+++.+|.+|+|+|.+|+
T Consensus 75 ~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 75 HFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp EEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred EEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 999888988876 4788899999999999999999887
No 157
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.40 E-value=6.8e-07 Score=86.96 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=71.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... . . ...+........+..++.++.+ +|
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~-----~----~-----~~~~~~~l~~~l~~~GV~i~~~~~v 217 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR-----V----A-----GEALSEFYQAEHRAHGVDLRTGAAM 217 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----T----S-----CHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----h----c-----CHHHHHHHHHHHHhCCCEEEECCEE
Confidence 578999999999999999999999999999998763210 0 0 0111222222344568888865 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.++..+......+|+ ++.+|.||+|+|..|+.
T Consensus 218 ~~i~~~~~~v~~v~l~dG~--------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 218 DCIEGDGTKVTGVRMQDGS--------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EEEEESSSBEEEEEESSSC--------EEECSEEEECSCCEESC
T ss_pred EEEEecCCcEEEEEeCCCC--------EEEcCEEEECCCCccCh
Confidence 8888765544322334676 89999999999998765
No 158
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=2.2e-07 Score=91.64 Aligned_cols=101 Identities=17% Similarity=0.244 Sum_probs=69.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||++|+.+|..|++.|.+|+|+++.+.+.- .. . ..+........+..++.++.+ +|
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~~---------~----~~~~~~l~~~l~~~gv~i~~~~~v 235 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--TY---------D----SELTAPVAESLKKLGIALHLGHSV 235 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--TS---------C----HHHHHHHHHHHHHHTCEEETTCEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--cc---------C----HHHHHHHHHHHHHCCCEEEECCEE
Confidence 46899999999999999999999999999999876310 00 0 011111112233457888765 88
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
+.++. ++ +.+. ..+|+ +.++.+|.||+|+|.+|+.+.
T Consensus 236 ~~i~~-~~-v~v~-~~~G~------~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 236 EGYEN-GC-LLAN-DGKGG------QLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEET-TE-EEEE-CSSSC------CCEECCSCEEECCCEEECCSS
T ss_pred EEEEe-CC-EEEE-ECCCc------eEEEECCEEEECcCCCcCCCC
Confidence 88887 44 5554 22342 117899999999999887653
No 159
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.39 E-value=7.8e-07 Score=92.31 Aligned_cols=35 Identities=9% Similarity=0.070 Sum_probs=32.6
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..+||+|||||++|+++|+.|++.|++|+|||+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999864
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=8.8e-07 Score=85.24 Aligned_cols=100 Identities=25% Similarity=0.360 Sum_probs=70.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... . . . ..+........+..++.++.+ +|
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----~----~-~----~~~~~~l~~~l~~~gv~i~~~~~v 210 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG-----L----L-H----PAAAKAVQAGLEGLGVRFHLGPVL 210 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----T----S-C----HHHHHHHHHHHHTTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----c----c-C----HHHHHHHHHHHHHcCCEEEeCCEE
Confidence 478999999999999999999999999999987652110 0 0 0 111122222234568888876 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+.+.+.+.. .+|. ++.+|.||+|+|..|+.
T Consensus 211 ~~i~~~~~~~~v~~-~~g~--------~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 211 ASLKKAGEGLEAHL-SDGE--------VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEECC
T ss_pred EEEEecCCEEEEEE-CCCC--------EEECCEEEECcCCCcCH
Confidence 88876555554432 3565 79999999999988765
No 161
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.36 E-value=2.7e-07 Score=89.52 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~ 95 (436)
.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 47999999999999999999999 99999999864
No 162
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.35 E-value=7e-07 Score=86.55 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=71.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... . . ...+........+..++.++.+ +|
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~-----~----~-----~~~~~~~l~~~l~~~GV~i~~~~~v 207 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR-----V----V-----TPEISSYFHDRHSGAGIRMHYGVRA 207 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----T----S-----CHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh-----c----c-----CHHHHHHHHHHHHhCCcEEEECCEE
Confidence 468999999999999999999999999999988653210 0 0 0111222222334568888876 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+++.+......+|+ ++.+|.||+|+|..|+.
T Consensus 208 ~~i~~~~~~v~~V~~~dG~--------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 208 TEIAAEGDRVTGVVLSDGN--------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEEEEETTEEEEEEETTSC--------EEECSEEEECCCEEECC
T ss_pred EEEEecCCcEEEEEeCCCC--------EEEcCEEEECcCCccCH
Confidence 8887655544333345676 89999999999998765
No 163
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.34 E-value=1.7e-06 Score=80.66 Aligned_cols=91 Identities=13% Similarity=0.243 Sum_probs=73.2
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC---CC--------CCcc----cHHHHHHHHHHHHh
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EI--------LSSF----DDRLRHYATTQLSK 296 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~~--------l~~~----~~~~~~~~~~~l~~ 296 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++. .. .+.+ ..++.+.+.+.+++
T Consensus 17 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (323)
T 3f8d_A 17 DVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEK 82 (323)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHT
T ss_pred CEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999765 889999985 10 1221 24677777888888
Q ss_pred cCCEEEecceEEEeCC----eEEEcCCcEEecceEEEecCCCCc
Q 013810 297 SGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 297 ~gV~i~~~~v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
.|++++..++.+++.+ .+.+.+|+++.+|.+|+|+|..|.
T Consensus 83 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 83 YEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp TTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred cCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 9999998768888653 467778889999999999999876
No 164
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.34 E-value=1.9e-06 Score=80.67 Aligned_cols=91 Identities=20% Similarity=0.283 Sum_probs=72.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCcc-----cHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQL 294 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~-----~~~~~~~~~~~l 294 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++... .+.+ ..++.+.+.+.+
T Consensus 10 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (325)
T 2q7v_A 10 DVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQA 75 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHH
Confidence 7999999999999999998765 89999998621 1122 245667777888
Q ss_pred HhcCCEEEecceEEEeCC-------eEEEcCCcEEecceEEEecCCCCc
Q 013810 295 SKSGVRLVRGIVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 295 ~~~gV~i~~~~v~~i~~~-------~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
++.|++++.+++.+++.. .|.+.+|+++.+|.+|+|+|..|.
T Consensus 76 ~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 76 EKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 889999998777777532 466778889999999999998775
No 165
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.34 E-value=7.2e-07 Score=87.90 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=69.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. +. . ...+........+..++.++.+ +|
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-----~~~~~~~l~~~l~~~gv~i~~~~~v 234 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-----SG-----F-----EKQMAAIIKKRLKKKGVEVVTNALA 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-----TT-----S-----CHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-----cc-----c-----CHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4789999999999999999999999999999986531 10 0 0111111122234468888875 88
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+.+.+....++. ..++.+|.||+|+|.+|+..
T Consensus 235 ~~i~~~~~~~~v~~~~~g~------~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 235 KGAEEREDGVTVTYEANGE------TKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEEEEETTEEEEEEEETTE------EEEEEESEEEECSCEEESCS
T ss_pred EEEEEeCCeEEEEEEeCCc------eeEEEcCEEEECcCCCcccC
Confidence 8887655444433211221 11789999999999988764
No 166
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.33 E-value=1.1e-06 Score=81.69 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=32.8
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~ 97 (436)
.+||+|||||+||++||..|++. |++|+|+|+.+..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 46999999999999999999998 9999999997654
No 167
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.32 E-value=8.2e-07 Score=88.09 Aligned_cols=103 Identities=17% Similarity=0.218 Sum_probs=69.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. .+ ..+........+..++.++.+ +|
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~-----~~~~~~l~~~l~~~gv~i~~~~~v 247 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------MD-----GEVAKATQKFLKKQGLDFKLSTKV 247 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS----------SC-----HHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc----------cC-----HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 478999999999999999999999999999998652110 00 111122222234468888875 78
Q ss_pred EeEeC--CCCEEEEEEec--CCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDT--DNHVVHCETVT--DELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~--~~~~v~~~~~~--~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+.++. +.+.+.+.... ++. ..++.+|.||+|+|.+|+..
T Consensus 248 ~~i~~~~~~~~~~v~~~~~~~g~------~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDTKTNK------QENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTTTE------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEecCCCeEEEEEEEcCCCC------ceEEECCEEEECCCCCcCCC
Confidence 88876 44444333211 121 11789999999999988764
No 168
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.32 E-value=8.4e-07 Score=86.11 Aligned_cols=96 Identities=21% Similarity=0.294 Sum_probs=68.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. . . ...+........+..++.++.+ +|
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~----~-----~~~~~~~l~~~l~~~GV~i~~~~~v 210 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-----A----A-----PATLADFVARYHAAQGVDLRFERSV 210 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----T----S-----CHHHHHHHHHHHHHTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----c----c-----CHHHHHHHHHHHHHcCcEEEeCCEE
Confidence 478999999999999999999999999999998653110 0 0 0011111122234568888886 88
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++ ++ .+.+ .+|. ++.+|.||+|+|..|+.
T Consensus 211 ~~i~-~~-~v~~---~~g~--------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 211 TGSV-DG-VVLL---DDGT--------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp EEEE-TT-EEEE---TTSC--------EEECSEEEECSCEEECC
T ss_pred EEEE-CC-EEEE---CCCC--------EEEcCEEEECcCCCccH
Confidence 8888 43 5544 3665 89999999999988764
No 169
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.31 E-value=6.3e-07 Score=87.01 Aligned_cols=94 Identities=16% Similarity=0.278 Sum_probs=71.4
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---Cc---------ccHHHHHHHHHHHHhcCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SS---------FDDRLRHYATTQLSKSGV 299 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---~~---------~~~~~~~~~~~~l~~~gV 299 (436)
+|+|||||++|+.+|..|++.. ..+.+|+++++.+.. +. ...++...+.+.+++.||
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~-----------~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 71 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLV-----------GSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGI 71 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH-----------GGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTC
T ss_pred eEEEECCCHHHHHHHHHHHhhC-----------CCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCe
Confidence 7999999999999999998721 123899999986411 11 112333446667788899
Q ss_pred EEEecceEEEeCC--eEEEcCCcE----EecceEEEecCCCCc
Q 013810 300 RLVRGIVKDVDSQ--KLILNDGTE----VPYGLLVWSTGVGPS 336 (436)
Q Consensus 300 ~i~~~~v~~i~~~--~v~~~~g~~----i~~D~vi~a~G~~p~ 336 (436)
+++.+++.+++.+ .|.+.+++. +.+|.||+|+|.+|+
T Consensus 72 ~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 72 QFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp EEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred EEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 9999888888754 788877754 999999999999886
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.30 E-value=7.5e-07 Score=87.64 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=68.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+.+. .. .+ ..+.+......+..++.++.+ +|
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~~-----~~~~~~l~~~l~~~Gv~i~~~~~v 231 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-----PS-----FD-----PMISETLVEVMNAEGPQLHTNAIP 231 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----SC-----HHHHHHHHHHHHHHSCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-----hh-----hh-----HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4689999999999999999999999999999876521 00 00 011111122233457888776 78
Q ss_pred EeEeCCC-CEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDN-HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~-~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+. +.+.+. ..+|+ ++.+|.||+|+|.+|+..
T Consensus 232 ~~i~~~~~~~~~v~-~~~g~--------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 232 KAVVKNTDGSLTLE-LEDGR--------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EEEEECTTSCEEEE-ETTSC--------EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCcEEEEE-ECCCc--------EEEcCEEEECCCCCcCCC
Confidence 8887653 223332 23565 789999999999988764
No 171
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.29 E-value=1.2e-06 Score=90.07 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=32.6
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~~~~ 96 (436)
.++|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 4799999999999999999999 9999999998754
No 172
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.29 E-value=3.5e-06 Score=79.71 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=69.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------------Ccc-------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------------SSF------- 282 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l----------------------~~~------- 282 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++.+.+ +.+
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 7999999999999999998765 899999985321 111
Q ss_pred ----cHHHHHHHHHHHHhcCCEEEec-ceEEEeC--Ce---EEEcCCcEEecceEEEecCCCC
Q 013810 283 ----DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 283 ----~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~---v~~~~g~~i~~D~vi~a~G~~p 335 (436)
..++.+.+.+.+++.|++++.+ +|++++. +. |.+.+| ++.+|.||+|+|...
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 0567788888888999999988 4887753 44 555666 899999999999643
No 173
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.28 E-value=1.6e-06 Score=86.32 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=69.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. ... . ...+........+..++.++.+ +|
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-----~~~----~-----~~~~~~~l~~~l~~~GV~i~~~~~v 259 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-----AGY----Y-----DRDLTDLMAKNMEEHGIQLAFGETV 259 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-----TTT----S-----CHHHHHHHHHHHHTTTCEEEETCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-----hhH----H-----HHHHHHHHHHHHHhCCeEEEeCCEE
Confidence 4789999999999999999999999999999986521 100 0 0112222222345578998876 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+.++.+.+...+.. ++. ++.+|.||+|+|.+|+..
T Consensus 260 ~~i~~~~~v~~v~~--~g~--------~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 260 KEVAGNGKVEKIIT--DKN--------EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEEECSSSCCEEEE--SSC--------EEECSEEEECCCEEECCG
T ss_pred EEEEcCCcEEEEEE--CCc--------EEECCEEEECCCCCcChH
Confidence 88876433212222 455 899999999999987654
No 174
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.28 E-value=1.2e-06 Score=86.77 Aligned_cols=102 Identities=21% Similarity=0.207 Sum_probs=69.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. .. ...+........+..++.++.+ +|
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 243 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------GI-----DMEISKNFQRILQKQGFKFKLNTKV 243 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------SC-----CHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------cc-----CHHHHHHHHHHHHHCCCEEEeCceE
Confidence 378999999999999999999999999999998653110 00 0111111222234468888775 78
Q ss_pred EeEeCCCCE-EEEEE----ecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHV-VHCET----VTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~-v~~~~----~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+. +.+.. ..++. ++.+|.||+|+|.+|+..
T Consensus 244 ~~i~~~~~~~~~v~~~~~~~~~~~--------~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAASGGKAE--------VITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEECTTSCEEEEEEETTSCCCE--------EEEESEEEECSCEEECCT
T ss_pred EEEEEcCCceEEEEEEecCCCCce--------EEEcCEEEECcCCCcCCC
Confidence 888765543 44331 12333 789999999999988754
No 175
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.28 E-value=1.9e-06 Score=81.04 Aligned_cols=92 Identities=22% Similarity=0.297 Sum_probs=73.0
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC----C-------------CCcc-----cHHHHH
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE----I-------------LSSF-----DDRLRH 288 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~----~-------------l~~~-----~~~~~~ 288 (436)
.+|+|||+|+.|+.+|..|++.+ .+|+++++.+ . .+.+ ..++.+
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMD 88 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHH
Confidence 48999999999999999999866 8999999832 0 1122 247778
Q ss_pred HHHHHHHhcCCEEEecceEEEeC--CeEEE-----cCCcEEecceEEEecCCCCc
Q 013810 289 YATTQLSKSGVRLVRGIVKDVDS--QKLIL-----NDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 289 ~~~~~l~~~gV~i~~~~v~~i~~--~~v~~-----~~g~~i~~D~vi~a~G~~p~ 336 (436)
.+.+.+++.|++++.+++.+++. +.+.+ .++.++.+|.+|+|+|..|.
T Consensus 89 ~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 89 RMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 88888999999999988888764 34444 46778999999999998765
No 176
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.27 E-value=2.9e-06 Score=78.84 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=71.7
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCC------------CCcc-----cHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (436)
+|+|||+|+.|+.+|..|++.+ . +|+++++... .+.+ ..++.+.+.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 6999999999999999998765 7 9999998521 1222 24566777788
Q ss_pred HHhcCCEEEecceEEEe--CC--eEEEcCCcEEecceEEEecCCCCc
Q 013810 294 LSKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 294 l~~~gV~i~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.+.|++++..++.+++ .+ .+.+.+|+++.+|.||+|+|..|.
T Consensus 69 ~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 69 CFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 88889999987677775 34 466778889999999999998765
No 177
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.27 E-value=1.2e-06 Score=86.53 Aligned_cols=103 Identities=13% Similarity=0.159 Sum_probs=69.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. .+ ..+........+..++.++.+ +|
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~~-----~~~~~~l~~~l~~~gv~i~~~~~v 235 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-----PN-----ED-----ADVSKEIEKQFKKLGVTILTATKV 235 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----SC-----HHHHHHHHHHHHHHTCEEECSCEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-----cc-----cC-----HHHHHHHHHHHHHcCCEEEeCcEE
Confidence 4789999999999999999999999999999986521 10 00 111111122233457888775 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+.+.+....+|+ ..++.+|.||+|+|..|+..
T Consensus 236 ~~i~~~~~~~~v~~~~~g~------~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 236 ESIADGGSQVTVTVTKDGV------AQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp EEEEECSSCEEEEEESSSC------EEEEEESEEEECSCEEECCS
T ss_pred EEEEEcCCeEEEEEEcCCc------eEEEEcCEEEECCCCCccCC
Confidence 8887655444433212342 12789999999999988764
No 178
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.26 E-value=1.2e-06 Score=85.53 Aligned_cols=101 Identities=17% Similarity=0.297 Sum_probs=67.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .. .+ ..+........+..++.++.+ +|
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~~----~~-----~~~~~~l~~~l~~~GV~i~~~~~v 214 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-----RV----TA-----PPVSAFYEHLHREAGVDIRTGTQV 214 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----TT----SC-----HHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----ch----hh-----HHHHHHHHHHHHhCCeEEEeCCEE
Confidence 47899999999999999999999999999998765211 00 00 011111111233457888776 78
Q ss_pred EeEeC--CCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDT--DNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~--~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++. +++.+......+|. .+.+|.||+|+|..|+.
T Consensus 215 ~~i~~~~~~~~v~~v~~~~G~--------~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 215 CGFEMSTDQQKVTAVLCEDGT--------RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EEEEECTTTCCEEEEEETTSC--------EEECSEEEECCCEEECC
T ss_pred EEEEeccCCCcEEEEEeCCCC--------EEEcCEEEECCCCCcCc
Confidence 88875 43333222234665 79999999999988764
No 179
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.26 E-value=1.6e-06 Score=85.30 Aligned_cols=101 Identities=17% Similarity=0.326 Sum_probs=69.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .. . ...+........+..++.++.+ +|
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~----~-----~~~~~~~l~~~l~~~Gv~i~~~~~v 214 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-----KY----F-----DKEFTDILAKDYEAHGVNLVLGSKV 214 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-----TT----S-----CHHHHHHHHHHHHHTTCEEEESSCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-----hh----h-----hhhHHHHHHHHHHHCCCEEEcCCee
Confidence 46899999999999999999999999999998765211 00 0 0111222222344568888876 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+.++.+++.+..... +|+ ++.+|.||+|+|.+|+..
T Consensus 215 ~~i~~~~~~v~~v~~-~g~--------~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 215 AAFEEVDDEIITKTL-DGK--------EIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEEEEETTEEEEEET-TSC--------EEEESEEEECCCEEECCG
T ss_pred EEEEcCCCeEEEEEe-CCC--------EEECCEEEECcCCCCCHH
Confidence 888764444432222 555 799999999999987653
No 180
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.26 E-value=3.3e-06 Score=83.02 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=71.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+.-. .. ...+.+......+..++.++.+ +|
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~~-----d~~~~~~l~~~l~~~GV~i~~~~~v 212 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK---------YF-----DKEMVAEVQKSLEKQAVIFHFEETV 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT---------TC-----CHHHHHHHHHHHHTTTEEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc---------cC-----CHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 478999999999999999999999999999998653110 00 0112222222345678998875 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..++..++.+.+.. +++ ++.+|.||+|+|.+|+...
T Consensus 213 ~~i~~~~~~v~v~~--~~g--------~i~aD~Vv~A~G~~p~~~~ 248 (452)
T 3oc4_A 213 LGIEETANGIVLET--SEQ--------EISCDSGIFALNLHPQLAY 248 (452)
T ss_dssp EEEEECSSCEEEEE--SSC--------EEEESEEEECSCCBCCCSS
T ss_pred EEEEccCCeEEEEE--CCC--------EEEeCEEEECcCCCCChHH
Confidence 88875555554432 333 7899999999999887653
No 181
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=2e-06 Score=85.83 Aligned_cols=100 Identities=13% Similarity=0.209 Sum_probs=69.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +.+ + ..+........+..++.++.+ +|
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~~--------d-----~~~~~~l~~~l~~~gv~i~~~~~v 240 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--RKF--------D-----ESVINVLENDMKKNNINIVTFADV 240 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--TTS--------C-----HHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--ccc--------c-----hhhHHHHHHHHHhCCCEEEECCEE
Confidence 4789999999999999999999999999999976532 000 0 111111222234468888776 78
Q ss_pred EeEeCCC-CEEEEEEecCCcccCCCCcee-eeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDN-HVVHCETVTDELRTLEPWKFK-ISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~-~~v~~~~~~~g~~~~~~~~~~-~~~d~lViAtG~~~~~~ 185 (436)
..++.+. +.+.+. ..+|+ + +.+|.||+|+|.+|+..
T Consensus 241 ~~i~~~~~~~~~v~-~~~g~--------~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 241 VEIKKVSDKNLSIH-LSDGR--------IYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EEEEESSTTCEEEE-ETTSC--------EEEEESEEEECCCBCCTTT
T ss_pred EEEEEcCCceEEEE-ECCCc--------EEEECCEEEECCCCCcCCC
Confidence 8887543 323333 23564 5 89999999999988763
No 182
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.25 E-value=3.3e-06 Score=78.49 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=71.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEE-EeCCCC------------CCccc-----HHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEANEI------------LSSFD-----DRLRHYATTQ 293 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~l-v~~~~~------------l~~~~-----~~~~~~~~~~ 293 (436)
+|+|||+|+.|+.+|..|++.+ .+|++ ++++.+ .+.++ .++...+.+.
T Consensus 6 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (315)
T 3r9u_A 6 DVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQ 71 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHH
Confidence 8999999999999999999866 88999 887421 12222 5677788888
Q ss_pred HHhcCCEEEecceEEE-eC--CeEE--EcCCcEEecceEEEecCCCCc
Q 013810 294 LSKSGVRLVRGIVKDV-DS--QKLI--LNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 294 l~~~gV~i~~~~v~~i-~~--~~v~--~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++.+++++.+++.++ +. +.+. +..+.++.+|.+|+|+|..|.
T Consensus 72 ~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 72 CMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 119 (315)
T ss_dssp HTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC
Confidence 8999999999887777 44 4454 543338999999999998775
No 183
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.25 E-value=9.4e-06 Score=77.80 Aligned_cols=91 Identities=24% Similarity=0.276 Sum_probs=71.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCc------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------------------------------ 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~------------------------------ 281 (436)
+|+|||+|++|+.+|..|++.+ .+|+++++.+....
T Consensus 13 dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 78 (379)
T 3alj_A 13 RAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHT 78 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBC
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCC
Confidence 7999999999999999999866 89999998532210
Q ss_pred ---------------c-----------cHHHHHHHHHHHHhcCCEEEecc-eEEEeCC-eEEEcCCcEEecceEEEecCC
Q 013810 282 ---------------F-----------DDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-KLILNDGTEVPYGLLVWSTGV 333 (436)
Q Consensus 282 ---------------~-----------~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~-~v~~~~g~~i~~D~vi~a~G~ 333 (436)
+ ...+.+.+.+.+.+.||+++.++ |++++.+ .|++.+|+++.+|.||.|.|.
T Consensus 79 ~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 79 PPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGV 158 (379)
T ss_dssp CSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCT
T ss_pred ccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCc
Confidence 0 03445667777888899999984 8877633 677888989999999999998
Q ss_pred CCc
Q 013810 334 GPS 336 (436)
Q Consensus 334 ~p~ 336 (436)
.+.
T Consensus 159 ~s~ 161 (379)
T 3alj_A 159 GSK 161 (379)
T ss_dssp TCH
T ss_pred cHH
Confidence 764
No 184
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.24 E-value=4.5e-07 Score=90.51 Aligned_cols=51 Identities=16% Similarity=0.144 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEe--CC---eEEEcCCcEEecceEEEecCCC
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD--SQ---KLILNDGTEVPYGLLVWSTGVG 334 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~ 334 (436)
..+.+.+.+.+++.|++|++++ |++|. ++ +|+++||+++.+|.||++++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 4567778888999999999995 88885 33 4788999999999999987654
No 185
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.23 E-value=2.4e-06 Score=85.01 Aligned_cols=103 Identities=18% Similarity=0.149 Sum_probs=68.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .. + ..+.+......+.. +.++.+ +|
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~~--------d-----~~~~~~l~~~l~~~-V~i~~~~~v 237 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--LQ--------D-----EEMKRYAEKTFNEE-FYFDAKARV 237 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--CC--------C-----HHHHHHHHHHHHTT-SEEETTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--cC--------C-----HHHHHHHHHHHhhC-cEEEECCEE
Confidence 47899999999999999999999999999999876310 00 0 01111111112233 776654 77
Q ss_pred EeEeCCCCEEEEEEe-cCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~-~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..++.+++.+.+... .+|+ +.++.+|.||+|+|..|+...
T Consensus 238 ~~i~~~~~~v~v~~~~~~G~------~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 238 ISTIEKEDAVEVIYFDKSGQ------KTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEEEECSSSEEEEEECTTCC------EEEEEESEEEECSCCEESCSS
T ss_pred EEEEEcCCEEEEEEEeCCCc------eEEEECCEEEEeeCCccCCCC
Confidence 788766555554432 2442 127899999999999887654
No 186
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.23 E-value=1.6e-06 Score=85.50 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=68.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . .+ ..+........+..++.++.+ +|
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----~-----~~-----~~~~~~l~~~l~~~gv~i~~~~~v 230 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----Q-----FD-----PLLSATLAENMHAQGIETHLEFAV 230 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----SC-----HHHHHHHHHHHHHTTCEEESSCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----c-----cC-----HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 36899999999999999999999999999998865220 0 00 011111122234467888776 68
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+.+.+.. .+|+ + ++.+|.||+|+|..|+..
T Consensus 231 ~~i~~~~~~~~v~~-~~G~------~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 231 AALERDAQGTTLVA-QDGT------R-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEEEEETTEEEEEE-TTCC------E-EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCeEEEEE-eCCc------E-EEEcCEEEECCCCCcCCC
Confidence 88876544344432 3442 1 489999999999988764
No 187
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.22 E-value=4.6e-06 Score=80.92 Aligned_cols=93 Identities=20% Similarity=0.266 Sum_probs=70.6
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHH-------------HHHHHHHhcC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRH-------------YATTQLSKSG 298 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~-------------~~~~~l~~~g 298 (436)
+|+|||+|+.|+.+|..|.+.+ ...+|+++++.+..+...+.+.. ...+.+++.+
T Consensus 4 ~vvIIGaG~AGl~aA~~L~~~g------------~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 71 (410)
T 3ef6_A 4 HVAIIGNGVGGFTTAQALRAEG------------FEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEAR 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT------------CCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTT
T ss_pred CEEEEcccHHHHHHHHHHHccC------------cCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCC
Confidence 7999999999999999998765 22469999996543221111111 1123566789
Q ss_pred CEEEec-ceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 299 VRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 299 V~i~~~-~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
|+++.+ ++..++. ..|.+.+|+++.+|.+|+|+|..|.
T Consensus 72 i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 72 IDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp CEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc
Confidence 999999 6988875 4788899999999999999998876
No 188
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.21 E-value=7.3e-07 Score=87.18 Aligned_cols=93 Identities=22% Similarity=0.371 Sum_probs=70.7
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcc------------cHHHHHHHHHHHHhcCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF------------DDRLRHYATTQLSKSGV 299 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~------------~~~~~~~~~~~l~~~gV 299 (436)
+|+|||+|+.|+.+|..|++++ .+.+|+|+++.+..... ..++...+.+.+++.||
T Consensus 4 ~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv 71 (430)
T 3h28_A 4 HVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNI 71 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTE
T ss_pred CEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCC
Confidence 8999999999999999998732 34899999996432110 11111223345667899
Q ss_pred EEEecceEEEeC--CeEEEcCCcEEecceEEEecCCCCc
Q 013810 300 RLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 300 ~i~~~~v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++.++++.++. ..|.+++++++.+|.+|+|+|.+|+
T Consensus 72 ~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 72 EFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred EEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc
Confidence 999888888876 4688889989999999999999876
No 189
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.21 E-value=1.5e-06 Score=86.36 Aligned_cols=99 Identities=10% Similarity=0.152 Sum_probs=68.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+. +. . ...+........+..++.++.+ +|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-----~~-----~-----~~~~~~~l~~~l~~~gV~i~~~~~v 249 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-----QG-----A-----DRDLVKVWQKQNEYRFDNIMVNTKT 249 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-----TT-----S-----CHHHHHHHHHHHGGGEEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-----cc-----c-----CHHHHHHHHHHHHhcCCEEEECCEE
Confidence 4789999999999999999999999999999986522 10 0 0111222222234567888776 78
Q ss_pred EeEeCCCCEEEEEEecC----CcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTD----ELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~----g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+.+.+.+.. .+ ++ ++.+|.||+|+|.+|+.
T Consensus 250 ~~i~~~~~~~~v~~-~~~~~~g~--------~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 250 VAVEPKEDGVYVTF-EGANAPKE--------PQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEEETTEEEEEE-ESSSCCSS--------CEEESCEEECCCEEECG
T ss_pred EEEEEcCCeEEEEE-eccCCCce--------EEEcCEEEECcCCCcCC
Confidence 88876554443332 13 43 68899999999998865
No 190
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.21 E-value=1.7e-06 Score=86.56 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=70.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++++|||||+.|+..|..+++.|.+|||+++...+ + +. + .++........+..++.++.+ .+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L------~----~~-D-----~ei~~~l~~~l~~~gi~~~~~~~v 286 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL------R----GF-D-----QQCAVKVKLYMEEQGVMFKNGILP 286 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS------T----TS-C-----HHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc------c----cc-c-----hhHHHHHHHHHHhhcceeecceEE
Confidence 368999999999999999999999999999875331 1 10 1 112222223345568888776 67
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..+......+.+.. .++. .+.+|.|++|+|-+|+..
T Consensus 287 ~~~~~~~~~~~v~~-~~~~--------~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 287 KKLTKMDDKILVEF-SDKT--------SELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEESCG
T ss_pred EEEEecCCeEEEEE-cCCC--------eEEEEEEEEcccccCCcc
Confidence 77777667666643 3444 788999999999888764
No 191
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.21 E-value=1.8e-06 Score=85.97 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=69.7
Q ss_pred CCcEEEECCchHHHHHHHhcccC---CCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
.++++|||||+.|+.+|..|++. |.+|+||++.+.+. .. .+ ..+........+..++.++.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~-----~d-----~~~~~~l~~~l~~~GV~i~~~ 255 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-----RG-----FD-----ETIREEVTKQLTANGIEIMTN 255 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-----TT-----SC-----HHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-----cc-----cC-----HHHHHHHHHHHHhCCCEEEeC
Confidence 36899999999999999999998 99999999986532 10 00 111112222234568898876
Q ss_pred -EeEeEeCCC-CEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 139 -HCAGIDTDN-HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 139 -~v~~id~~~-~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+|..++.+. +.+.+. ..+|+ ++.+|.||+|+|..|+..
T Consensus 256 ~~v~~i~~~~~~~~~v~-~~~G~--------~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHVT-FESGK--------TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CCEEEEEECTTSCEEEE-ETTSC--------EEEESEEEECSCEEECCG
T ss_pred CEEEEEEEcCCceEEEE-ECCCc--------EEEcCEEEECCCCccccc
Confidence 788887653 223333 23565 799999999999987653
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.20 E-value=1.8e-06 Score=85.57 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=68.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-E
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (436)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- .. ...+........+..++.++.+ +
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~~-----~~~~~~~l~~~l~~~Gv~i~~~~~ 249 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT----------IY-----DGDMAEYIYKEADKHHIEILTNEN 249 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS----------SS-----CHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh----------cC-----CHHHHHHHHHHHHHcCcEEEcCCE
Confidence 347899999999999999999999999999998764211 00 0111112222234467888765 7
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
|..++.+.+...+.. ++. ++.+|.||+|+|..|+..
T Consensus 250 v~~i~~~~~v~~v~~--~~~--------~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 250 VKAFKGNERVEAVET--DKG--------TYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEEEEESSBEEEEEE--TTE--------EEECSEEEECSCEEESCG
T ss_pred EEEEEcCCcEEEEEE--CCC--------EEEcCEEEECcCCCcChH
Confidence 788876543322322 333 789999999999987653
No 193
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.20 E-value=3.3e-06 Score=79.07 Aligned_cols=91 Identities=23% Similarity=0.291 Sum_probs=71.4
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------Ccc----cHHHHHHH
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l----------------~~~----~~~~~~~~ 290 (436)
.+|+|||+|+.|+.+|..|++.+ .+|+++++.+.+ +.+ ..++...+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 37999999999999999998765 899999985421 111 35677778
Q ss_pred HHHHHhcCCEEEec-ceEEEeC--C---eEEEcCCcEEecceEEEecCC---CCc
Q 013810 291 TTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGV---GPS 336 (436)
Q Consensus 291 ~~~l~~~gV~i~~~-~v~~i~~--~---~v~~~~g~~i~~D~vi~a~G~---~p~ 336 (436)
.+.+++.+++++.+ +|.+++. + .|.+.+|+ +.+|.||+|+|. .|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 88888889999987 5888754 3 46667775 999999999999 554
No 194
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.20 E-value=2.8e-06 Score=85.07 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=77.7
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-------------------------------
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------------------------- 279 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l------------------------------- 279 (436)
.+|+|||+|+.|+.+|..|++.+ .+|+|+++.+..
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 37999999999999999999866 889999875210
Q ss_pred ------------Ccc------------------------------cHHHHHHHHHHHHhcCCEEEecc-eEEEeC--C--
Q 013810 280 ------------SSF------------------------------DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q-- 312 (436)
Q Consensus 280 ------------~~~------------------------------~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~-- 312 (436)
+.+ ...+.+.+.+.+++.|++++.++ |+++.. +
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 000 03445566777888899999994 888753 2
Q ss_pred -eEEEcCCcEEecceEEEecCCCCc---hhcccCCCCCC
Q 013810 313 -KLILNDGTEVPYGLLVWSTGVGPS---TLVKSLDLPKS 347 (436)
Q Consensus 313 -~v~~~~g~~i~~D~vi~a~G~~p~---~~~~~~~l~~~ 347 (436)
.|++.+|+++.+|.||+|+|..+. .++...|+...
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 377889999999999999999986 24566666554
No 195
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=1.6e-06 Score=85.96 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=67.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .+ + ..+........+..++.++.+ +|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~~--------d-----~~~~~~l~~~l~~~Gv~i~~~~~v 249 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR--KF--------D-----ECIQNTITDHYVKEGINVHKLSKI 249 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT--TS--------C-----HHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc--cc--------C-----HHHHHHHHHHHHhCCeEEEeCCEE
Confidence 47899999999999999999999999999999865221 00 0 011111122233457888776 78
Q ss_pred EeEeCCCCE--EEEEEecCC-cccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHV--VHCETVTDE-LRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~--v~~~~~~~g-~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+.+. +.+. ..+| . ++.+|.||+|+|.+|+.
T Consensus 250 ~~i~~~~~~~~~~v~-~~~G~~--------~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 250 VKVEKNVETDKLKIH-MNDSKS--------IDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEEEECC-CCCEEEE-ETTSCE--------EEEESEEEECSCEEECC
T ss_pred EEEEEcCCCcEEEEE-ECCCcE--------EEEcCEEEECCCCCCcc
Confidence 888754322 3332 2355 4 79999999999998876
No 196
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.18 E-value=2e-06 Score=85.47 Aligned_cols=100 Identities=12% Similarity=0.170 Sum_probs=70.1
Q ss_pred CCcEEEECCchHHHHHHHhcccC---CCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (436)
.++++|||||+.|+.+|..|++. |.+|+||++.+.+. +. .+ ..+........+..++.++.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~-----~d-----~~~~~~l~~~l~~~GV~i~~~ 251 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-----RG-----FD-----SELRKQLTEQLRANGINVRTH 251 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----TT-----SC-----HHHHHHHHHHHHHTTEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----cc-----cC-----HHHHHHHHHHHHhCCCEEEeC
Confidence 46899999999999999999998 99999999987521 10 00 111122222234568888876
Q ss_pred -EeEeEeCCCC-EEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 139 -HCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 139 -~v~~id~~~~-~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+|..++.+.+ .+.+. ..+|+ ++.+|.||+|+|..|+..
T Consensus 252 ~~v~~i~~~~~~~~~v~-~~~G~--------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 252 ENPAKVTKNADGTRHVV-FESGA--------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CCEEEEEECTTSCEEEE-ETTSC--------EEEESEEEECSCEEESCT
T ss_pred CEEEEEEEcCCCEEEEE-ECCCc--------EEEcCEEEEccCCCcCcc
Confidence 7888876542 34333 23565 799999999999988764
No 197
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.18 E-value=5.3e-06 Score=77.03 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=71.4
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC---CC--------Cc----ccHHHHHHHHHHHHh
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE---IL--------SS----FDDRLRHYATTQLSK 296 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~---~l--------~~----~~~~~~~~~~~~l~~ 296 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++.. .. .. ..+++.+.+.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKG--------------IRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 6999999999999999998765 8899997521 10 01 124677778888888
Q ss_pred cCCEEEec-ceEEEeCC-------eEEEcCCcEEecceEEEecCCCCc
Q 013810 297 SGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 297 ~gV~i~~~-~v~~i~~~-------~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
.|++++.+ ++..++.+ .|.+.+|+++.+|.+|+|+|..|.
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 99999999 68888532 466778888999999999998765
No 198
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.18 E-value=2.7e-06 Score=84.11 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=68.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhh-cCCCcEEEEe-E
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAIS-REPGSYFFLS-H 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 139 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. . ...+........ +..++.++.+ +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~-----~-----d~~~~~~l~~~l~~~~gv~i~~~~~ 238 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-----PT-----L-----DEDVTNALVGALAKNEKMKFMTSTK 238 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT-----S-----CHHHHHHHHHHHHHHTCCEEECSCE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-----cc-----C-----CHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 4789999999999999999999999999999986521 10 0 011111122223 4568888875 8
Q ss_pred eEeEeCCCCEEEEEEe-cCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 140 CAGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 140 v~~id~~~~~v~~~~~-~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
|..++.+.+.+.+... .+|+ ..++.+|.||+|+|..|+..
T Consensus 239 v~~i~~~~~~~~v~~~~~~g~------~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 239 VVGGTNNGDSVSLEVEGKNGK------RETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEEcCCeEEEEEEcCCCc------eEEEECCEEEECCCcccCCC
Confidence 8888765543433221 1331 11789999999999988764
No 199
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1.5e-06 Score=85.94 Aligned_cols=103 Identities=19% Similarity=0.237 Sum_probs=69.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. . ...+........+..++.++.+ +|
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-----~~-----~-----~~~~~~~l~~~l~~~gv~i~~~~~v 241 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-----PT-----M-----DAEIRKQFQRSLEKQGMKFKLKTKV 241 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-----TT-----S-----CHHHHHHHHHHHHHSSCCEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-----cc-----c-----cHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 4789999999999999999999999999999986531 10 0 0111111222234467888775 88
Q ss_pred EeEeCCCCEEEEEEe--cCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~--~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+.+.+... .+|+ ..++.+|.||+|+|..|+..
T Consensus 242 ~~i~~~~~~~~v~~~~~~~g~------~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 242 VGVDTSGDGVKLTVEPSAGGE------QTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp EEEECSSSSEEEEEEESSSCC------CEEEEESEEECCCCEEECCT
T ss_pred EEEEEcCCeEEEEEEecCCCc------ceEEECCEEEECCCCCcCCC
Confidence 888876543433221 1331 11789999999999988754
No 200
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.17 E-value=3.1e-06 Score=84.21 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=70.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . . ...+.+......+..++.++.+ +|
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------~-~-----d~~~~~~l~~~l~~~gV~v~~~~~v 262 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------G-M-----DGEVAKQLQRMLTKQGIDFKLGAKV 262 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------S-S-----CHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------c-C-----CHHHHHHHHHHHHhCCCEEEECCeE
Confidence 47899999999999999999999999999998875321 0 0 0111222222234468888775 78
Q ss_pred EeEeCCCCEEEEEEe--cCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~--~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..++.+.+.+.+... .+|+ +.++.+|.||+|+|..|+...
T Consensus 263 ~~i~~~~~~~~v~~~~~~~g~------~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 263 TGAVKSGDGAKVTFEPVKGGE------ATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEETTEEEEEEEETTSCC------CEEEEESEEEECCCCEECCTT
T ss_pred EEEEEeCCEEEEEEEecCCCc------eEEEEcCEEEEeeCCccCCCc
Confidence 888765555443322 1232 127899999999999877643
No 201
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.15 E-value=6.3e-06 Score=77.45 Aligned_cols=90 Identities=16% Similarity=0.211 Sum_probs=69.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------Ccc----cHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYAT 291 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l----------------~~~----~~~~~~~~~ 291 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++.+.+ +.+ ..++.+.+.
T Consensus 7 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 72 (335)
T 2zbw_A 7 DVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLV 72 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHH
Confidence 7999999999999999998755 899999985321 111 245666777
Q ss_pred HHHHhcCCEEEec-ceEEEeCC--e--EEEcCCcEEecceEEEecCCCC
Q 013810 292 TQLSKSGVRLVRG-IVKDVDSQ--K--LILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 292 ~~l~~~gV~i~~~-~v~~i~~~--~--v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+.+++.+++++.+ +|.+++.. . |.+.+|+++.+|.||+|+|..+
T Consensus 73 ~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 73 EQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp HHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 7888889999887 48877542 2 5667788899999999999853
No 202
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.15 E-value=6.6e-07 Score=89.48 Aligned_cols=49 Identities=27% Similarity=0.333 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC--CeEEEcCCcEEecceEEEecCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGV 333 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~v~~~~g~~i~~D~vi~a~G~ 333 (436)
.+.+.+.+.+.+.|++++.++ |++|+. ..+++.+|+++.+|.||+++..
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 456667777888899999985 888864 5788999999999999998763
No 203
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.15 E-value=3.2e-06 Score=82.72 Aligned_cols=96 Identities=9% Similarity=0.140 Sum_probs=67.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
..+|+|||||+.|+.+|..+++.|.+|+|+++.+.+. . . . .. .+........+..++.++.+ +|
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-----~----~-~-d~----~~~~~~~~~l~~~gV~i~~~~~v 211 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-----K----L-M-DA----DMNQPILDELDKREIPYRLNEEI 211 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-----T----T-S-CG----GGGHHHHHHHHHTTCCEEESCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-----c----c-c-cc----hhHHHHHHHhhccceEEEeccEE
Confidence 4689999999999999999999999999999886521 1 0 0 01 11122222344567888776 67
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++. ..+.+ .+++ .+++|.+++|+|..|+..
T Consensus 212 ~~~~~--~~v~~---~~g~--------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 212 NAING--NEITF---KSGK--------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp EEEET--TEEEE---TTSC--------EEECSEEEECCCEEESCG
T ss_pred EEecC--Ceeee---cCCe--------EEeeeeEEEEeceecCcH
Confidence 77764 34544 3666 899999999999887653
No 204
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.15 E-value=4.1e-06 Score=84.86 Aligned_cols=99 Identities=14% Similarity=0.218 Sum_probs=68.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- .. ...+........+..++.++.+ +|
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~~-------------~~~~~~~l~~~l~~~GV~i~~~~~v 215 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT--PV-------------DREMAGFAHQAIRDQGVDLRLGTAL 215 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT--TS-------------CHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch--hc-------------CHHHHHHHHHHHHHCCCEEEeCCeE
Confidence 36899999999999999999999999999998765211 00 0111111222234568888775 77
Q ss_pred EeEeC-------------------CCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDT-------------------DNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~-------------------~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++. ..+.+.+.. .+|+ ++.+|.||+|+|..|+.
T Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~--------~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGE--------LLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSC--------EEEESEEEECSCEEECC
T ss_pred EEEeccccccccccccccccccccCCCcEEEEE-cCCC--------EEEcCEEEECcCCccch
Confidence 77765 344444432 4565 79999999999988764
No 205
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.14 E-value=1.4e-05 Score=75.93 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=70.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC--------C--------cc----cHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL--------S--------SF----DDRLRHYAT 291 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l--------~--------~~----~~~~~~~~~ 291 (436)
+|+|||+|+.|+.+|..|++.+ .+|+|+++.+.+ + .+ ..++.+.+.
T Consensus 16 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (360)
T 3ab1_A 16 DLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLW 81 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHH
Confidence 7999999999999999998755 899999985321 1 11 256667777
Q ss_pred HHHHhcCCEEEec-ceEEEeC--C---eEEEcCCcEEecceEEEecCCCC
Q 013810 292 TQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 292 ~~l~~~gV~i~~~-~v~~i~~--~---~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+.+++.+++++.+ +|..++. + .|.+.+|+++.+|.||+|+|..+
T Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 82 AQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 8888889999887 4888763 2 46777888899999999999843
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.14 E-value=2.6e-06 Score=84.95 Aligned_cols=100 Identities=18% Similarity=0.242 Sum_probs=71.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+.- . .+ ..+........+..++.++.+ +|
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------~-~d-----~~~~~~l~~~l~~~GV~i~~~~~V 246 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP---------Y-ED-----ADAALVLEESFAERGVRLFKNARA 246 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC---------C-SS-----HHHHHHHHHHHHHTTCEEETTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc---------c-cC-----HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 47899999999999999999999999999999865321 0 00 111122222234568888775 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
+.++.+.+.+.+. ..++. ++.+|.||+|+|..|+..
T Consensus 247 ~~i~~~~~~v~v~-~~~g~--------~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 247 ASVTRTGAGVLVT-MTDGR--------TVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EEEEECSSSEEEE-ETTSC--------EEEESEEEECCCEEECCS
T ss_pred EEEEEeCCEEEEE-ECCCc--------EEEcCEEEECCCCCcCCC
Confidence 8887665545554 23554 799999999999988763
No 207
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.14 E-value=2.6e-06 Score=86.75 Aligned_cols=97 Identities=15% Similarity=0.278 Sum_probs=69.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. + ...+........+..++.++.+ +|
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--~-------------~~~~~~~l~~~l~~~GV~i~~~~~v 251 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP--I-------------DYEMAAYVHEHMKNHDVELVFEDGV 251 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--S-------------CHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc--C-------------CHHHHHHHHHHHHHcCCEEEECCeE
Confidence 478999999999999999999999999999987652110 0 0111112222234568888774 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+.+.+.+ .+|+ ++.+|.||+|+|..|+.
T Consensus 252 ~~i~~~~~~v~~---~~g~--------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 252 DALEENGAVVRL---KSGS--------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEEEGGGTEEEE---TTSC--------EEECSEEEECSCEEECC
T ss_pred EEEecCCCEEEE---CCCC--------EEEcCEEEEccCCCCCh
Confidence 888776555554 3565 89999999999988765
No 208
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.14 E-value=2.7e-06 Score=84.11 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=68.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + .+ . .+........+..++.++.+ +|
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~------~~-~----~~~~~l~~~l~~~Gv~i~~~~~v 239 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-----R------ED-P----AIGEAVTAAFRAEGIEVLEHTQA 239 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-----T------SC-H----HHHHHHHHHHHHTTCEEETTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-----C------CC-H----HHHHHHHHHHHhCCCEEEcCCEE
Confidence 4789999999999999999999999999999876521 1 00 0 11111122234467888765 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.++..+.+.. ++. ++.+|.||+|+|..|+..
T Consensus 240 ~~i~~~~~~~~v~~--~~~--------~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 240 SQVAHMDGEFVLTT--THG--------ELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEEEEETTEEEEEE--TTE--------EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCEEEEEE--CCc--------EEEcCEEEECCCCCcCCC
Confidence 88876555544432 333 789999999999987753
No 209
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.13 E-value=1.9e-06 Score=82.28 Aligned_cols=92 Identities=18% Similarity=0.303 Sum_probs=65.2
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-EeE
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HCA 141 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~ 141 (436)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + . ...+.+......+..++.++.+ +|.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~------~-----~~~~~~~l~~~l~~~gV~i~~~~~v~ 207 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-----G------L-----DEELSNMIKDMLEETGVKFFLNSELL 207 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-----T------C-----CHHHHHHHHHHHHHTTEEEECSCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-----c------C-----CHHHHHHHHHHHHHCCCEEEcCCEEE
Confidence 689999999999999999999999999999886521 1 0 0111222222234568888776 777
Q ss_pred eEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 142 GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 142 ~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
.++. ..+.+ .+| ++.+|.||+|+|..|+.
T Consensus 208 ~i~~--~~v~~---~~g---------~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 208 EANE--EGVLT---NSG---------FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp EECS--SEEEE---TTE---------EEECSCEEEECCEEECC
T ss_pred EEEe--eEEEE---CCC---------EEEcCEEEECcCCCcCH
Confidence 7762 34544 233 48899999999988765
No 210
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.13 E-value=3.7e-06 Score=83.17 Aligned_cols=100 Identities=14% Similarity=0.222 Sum_probs=70.7
Q ss_pred CCcEEEECCchHHHHHHHhcccC-CCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-E
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (436)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+.-. . .+ ..+........+..++.++.+ +
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-----~----~~-----~~~~~~l~~~l~~~GV~i~~~~~ 224 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-----F----TS-----KSLSQMLRHDLEKNDVVVHTGEK 224 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----T----SC-----HHHHHHHHHHHHHTTCEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----c----cC-----HHHHHHHHHHHHhcCCEEEeCCE
Confidence 47899999999999999999999 9999999987652110 0 00 111222222344568888876 7
Q ss_pred eEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 140 v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
|..++.+++.+.+.. .+|+ ++.+|.||+|+|..|+.
T Consensus 225 v~~i~~~~~~v~v~~-~~g~--------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 225 VVRLEGENGKVARVI-TDKR--------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEEEEESSSBEEEEE-ESSC--------EEECSEEEECSCEEECC
T ss_pred EEEEEccCCeEEEEE-eCCC--------EEEcCEEEECCCCCcCH
Confidence 888887555554332 3665 89999999999998764
No 211
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.12 E-value=2.8e-06 Score=90.08 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
++||+|||||++|+++|+.|++.|. +|+|||+...
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 4799999999999999999999998 9999998764
No 212
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.12 E-value=6e-06 Score=81.79 Aligned_cols=103 Identities=21% Similarity=0.294 Sum_probs=70.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . . ...+........+..++.++.+ +|
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~-----~-----~~~~~~~l~~~l~~~Gv~v~~~~~v 244 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----A-----V-----DEQVAKEAQKILTKQGLKILLGARV 244 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T-----S-----CHHHHHHHHHHHHHTTEEEEETCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----c-----c-----CHHHHHHHHHHHHhCCCEEEECCEE
Confidence 47899999999999999999999999999999865311 0 0 0111222222234568888876 78
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+.+.+... ++.. +.++.+|.||+|+|..|+..
T Consensus 245 ~~i~~~~~~~~v~~~-~~~g-----~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 245 TGTEVKNKQVTVKFV-DAEG-----EKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEEEECSSCEEEEEE-SSSE-----EEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCEEEEEEE-eCCC-----cEEEECCEEEEeeCCcccCC
Confidence 888766555444322 2210 11789999999999987764
No 213
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.11 E-value=6.8e-06 Score=83.62 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~ 96 (436)
.+||||||||+||++||+.|++.| .+|+|||+...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 379999999999999999999999 99999999753
No 214
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.11 E-value=6.7e-06 Score=77.18 Aligned_cols=90 Identities=19% Similarity=0.244 Sum_probs=70.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeC----C-CC------------CCcc-----cHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA----N-EI------------LSSF-----DDRLRHY 289 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~----~-~~------------l~~~-----~~~~~~~ 289 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++ . .. .+.+ ..++.+.
T Consensus 10 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (333)
T 1vdc_A 10 RLCIVGSGPAAHTAAIYAARAE--------------LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDK 75 (333)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHH
Confidence 7999999999999999998765 88999987 2 11 1111 2466677
Q ss_pred HHHHHHhcCCEEEecceEEEeC--C--eEEEcCCcEEecceEEEecCCCCc
Q 013810 290 ATTQLSKSGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.+.+++.|++++.+++.+++. + .|.+ +|+++.+|.||+|+|..|.
T Consensus 76 l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 76 FRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 7788888999999888777764 2 3555 7788999999999998875
No 215
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.10 E-value=9.3e-06 Score=75.68 Aligned_cols=101 Identities=12% Similarity=0.106 Sum_probs=68.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...+ .+.+......+..++.++.+ +|
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~-----------------~~~~~l~~~l~~~gv~i~~~~~v 207 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEK-----------------ILIKRLMDKVENGNIILHTNRTL 207 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCH-----------------HHHHHHHHHHHTSSEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccCH-----------------HHHHHHHHhcccCCeEEEcCcee
Confidence 4789999999999999999999999999999876532110 11111111233468888765 88
Q ss_pred EeEeCCCCE---EEEEEecC-CcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHV---VHCETVTD-ELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~---v~~~~~~~-g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++.+.+. +.+....+ |+ +.++.+|.||+|+|..|...
T Consensus 208 ~~i~~~~~~v~~v~~~~~~~~g~------~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 208 EEVTGDQMGVTGVRLRDTQNSDN------IESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEEEECSSSEEEEEEECCTTCCC------CEEEECSEEEECSCEEESCG
T ss_pred EEEEcCCCceEEEEEEeccCCCc------eEEEEcCEEEEEeCCCCChH
Confidence 888766532 44432111 32 12789999999999887653
No 216
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.10 E-value=1.6e-05 Score=75.77 Aligned_cols=90 Identities=16% Similarity=0.281 Sum_probs=67.6
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCC--------------CCc---------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI--------------LSS--------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~--------------l~~--------------- 281 (436)
+|+|||+|+.|+.+|..|++.+ . +|+++++.++ .+.
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 7999999999999999998765 6 8999998530 000
Q ss_pred --------------ccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC----eEEEcCCcEEecceEEEecCCCCc
Q 013810 282 --------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 282 --------------~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~----~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
....+.+.+.+.+++.|++++.++ |.+++.+ .|.+.++ ++.+|.||+|+|..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 012345566777788899999884 8877643 3555565 5899999999998765
No 217
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.09 E-value=1.1e-05 Score=79.10 Aligned_cols=84 Identities=10% Similarity=0.023 Sum_probs=62.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCe-EEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEe
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~-v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (436)
.++|+|||||+.|+.+|..|++.+.+ |+|+++.+.+ ....++. ....|
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~------------------------------l~~~~i~-~~~~v 260 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD------------------------------IQNESLQ-QVPEI 260 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS------------------------------CBCSSEE-EECCE
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc------------------------------CCCCCeE-EecCe
Confidence 47899999999999999999999999 9999987653 0012333 23466
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..++.+...+.+. +|+ ..+.+|.||+|||..|..+-
T Consensus 261 ~~~~~~~~~v~~~---dG~-------~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 261 TKFDPTTREIYLK---GGK-------VLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEEETTTTEEEET---TTE-------EECCCSEEEECCCBCCCCCC
T ss_pred EEEecCCCEEEEC---CCC-------EeccCCEEEECCCCCcCCCC
Confidence 6776555566553 564 13789999999999987655
No 218
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.09 E-value=7.2e-06 Score=80.54 Aligned_cols=98 Identities=14% Similarity=0.253 Sum_probs=65.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ..+ ..+........+.. +.++.+ .|
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~----~~~-----~~~~~~l~~~l~~~-v~i~~~~~v 212 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-----R----SFD-----KEVTDILEEKLKKH-VNLRLQEIT 212 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----T----TSC-----HHHHHHHHHHHTTT-SEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-----h----hcC-----HHHHHHHHHHHHhC-cEEEeCCeE
Confidence 36899999999999999999999999999999865211 0 000 11111112223334 777665 67
Q ss_pred EeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..++.+.+...+. .++. ++.+|.||+|+|..|+.
T Consensus 213 ~~i~~~~~v~~v~--~~g~--------~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 213 MKIEGEERVEKVV--TDAG--------EYKAELVILATGIKPNI 246 (449)
T ss_dssp EEEECSSSCCEEE--ETTE--------EEECSEEEECSCEEECC
T ss_pred EEEeccCcEEEEE--eCCC--------EEECCEEEEeeCCccCH
Confidence 7777654321222 2454 89999999999988764
No 219
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.09 E-value=9.9e-06 Score=76.18 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=72.2
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCcc-----cHHHHHHHHHH
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~-----~~~~~~~~~~~ 293 (436)
.+|+|||+|+.|+.+|..|++.+ .+|+++++... .+.+ .+++.+.+.+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQ--------------LAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTT--------------CCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 37999999999999999998765 88999986321 1112 24666777778
Q ss_pred HHhcCCEEEecceEEEeC-C--eE-EEcCCcEEecceEEEecCCCCc
Q 013810 294 LSKSGVRLVRGIVKDVDS-Q--KL-ILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 294 l~~~gV~i~~~~v~~i~~-~--~v-~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++.|++++.+++.+++. + .| .+.+|+++.+|.+|+|+|..|.
T Consensus 81 ~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 81 ALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 888899999988777764 2 36 6778889999999999998765
No 220
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.07 E-value=5.6e-06 Score=82.05 Aligned_cols=105 Identities=12% Similarity=0.068 Sum_probs=68.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +.. ...+.+......+..++.++.+ .|
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~~-------------d~~~~~~~~~~l~~~gv~i~~~~~v 251 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--RSF-------------DSMISTNCTEELENAGVEVLKFSQV 251 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TTS-------------CHHHHHHHHHHHHHTTCEEETTEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--ccc-------------CHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4789999999999999999999999999999876522 000 0111111222234467888775 77
Q ss_pred EeEeCCCCE--EEEEEecC--CcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDNHV--VHCETVTD--ELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~~~--v~~~~~~~--g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++...+. +.+...+. +.. ....+.+|.||+|+|..|+..
T Consensus 252 ~~i~~~~~~~~~~v~~~~~~~g~~----~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 252 KEVKKTLSGLEVSMVTAVPGRLPV----MTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEECSSSEEEEEEECCTTSCCE----EEEEEEESEEEECSCEEESCT
T ss_pred EEEEEcCCCcEEEEEEccCCCCcc----cceEEEcCEEEEeeccccCCC
Confidence 788754332 33332211 110 002789999999999987764
No 221
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.07 E-value=1.3e-05 Score=77.77 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=68.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC----------------------------c--
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------S-- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~----------------------------~-- 281 (436)
+|+|||||++|+.+|..|++.+ .+|+|+++.+... .
T Consensus 29 dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 7999999999999999999866 8899999853210 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhcCCEEEecc-eEEEe--CCe--EEEcCCcE
Q 013810 282 -----------------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQK--LILNDGTE 321 (436)
Q Consensus 282 -----------------------------------~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~--v~~~~g~~ 321 (436)
....+.+.+.+.+++.||+++.++ |+++. ++. |.+.+| +
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 012455667777888899999984 88774 333 555666 8
Q ss_pred EecceEEEecCCCC
Q 013810 322 VPYGLLVWSTGVGP 335 (436)
Q Consensus 322 i~~D~vi~a~G~~p 335 (436)
+.+|.||+|+|..+
T Consensus 174 i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 VDAASLVVASGGKS 187 (417)
T ss_dssp EEESEEEECCCCSS
T ss_pred EEeeEEEECCCCcc
Confidence 99999999999876
No 222
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.06 E-value=2.4e-06 Score=83.30 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=35.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~~~~~ 99 (436)
.++||+|||||++||+||..|++.| ++|+|+|+++..+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 4579999999999999999999999 89999999887643
No 223
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.06 E-value=2.4e-06 Score=84.08 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=36.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT 100 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~ 100 (436)
..+||+|||||++||+||..|++.|++|+|+|++++.+..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 4589999999999999999999999999999999886554
No 224
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.05 E-value=5.1e-06 Score=83.29 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=67.7
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-EeE
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HCA 141 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~ 141 (436)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. . ...+........+..++.++.+ +|+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-----~~-----~-----~~~~~~~l~~~l~~~GV~i~~~~~V~ 279 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-----LI-----K-----DNETRAYVLDRMKEQGMEIISGSNVT 279 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-----TC-----C-----SHHHHHHHHHHHHHTTCEEESSCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-----cc-----c-----cHHHHHHHHHHHHhCCcEEEECCEEE
Confidence 789999999999999999999999999999986521 10 0 0111111222234568888865 888
Q ss_pred eEeCCCCE----EEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 142 GIDTDNHV----VHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 142 ~id~~~~~----v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
.++.+.+. +.+.. .+|+ .++.+|.||+|+|..|+.
T Consensus 280 ~i~~~~~~~v~~~~v~~-~~G~-------~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 280 RIEEDANGRVQAVVAMT-PNGE-------MRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp EEEECTTSBEEEEEEEE-TTEE-------EEEECSCEEECCCCEECC
T ss_pred EEEEcCCCceEEEEEEE-CCCc-------EEEEcCEEEECcCCccCC
Confidence 88763322 33332 2342 168999999999998865
No 225
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.03 E-value=2.2e-06 Score=83.71 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|+||||||+|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999876
No 226
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.03 E-value=1.7e-05 Score=73.88 Aligned_cols=90 Identities=12% Similarity=0.141 Sum_probs=69.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCcc----cHHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF----DDRLRHYATTQLS 295 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------------l~~~----~~~~~~~~~~~l~ 295 (436)
+|+|||+|+.|+.+|..|++.+ .+|+++++... .+.+ ..++.+.+.+.++
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSG--------------FSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAA 83 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHH
Confidence 7999999999999999998765 89999998421 1111 2456667777888
Q ss_pred hcCCEEEecceEEEe--CC--eEEEcCCcEEecceEEEecCCCCc
Q 013810 296 KSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 296 ~~gV~i~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.|++++.+++.+++ .+ .|.+ ++.++.+|.+|+|+|..|.
T Consensus 84 ~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 84 NYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp TTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred HcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 889999887677775 34 3444 6678999999999998765
No 227
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.02 E-value=3.2e-06 Score=83.64 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=34.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~~~~~ 99 (436)
++||+|||||++||+||++|++.|. +|+|+|+++..+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 3699999999999999999999999 9999999877544
No 228
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.02 E-value=2.2e-05 Score=72.77 Aligned_cols=91 Identities=19% Similarity=0.288 Sum_probs=65.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-------Cc-------ccHHHHHHHHHHHHhc
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-------SS-------FDDRLRHYATTQLSKS 297 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-------~~-------~~~~~~~~~~~~l~~~ 297 (436)
.|+|||+|+.|+.+|..+++.+ .+|+++++.... +. .++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 5999999999999999998766 899999985311 11 1245555555555554
Q ss_pred -CCEEEecceEEEeC-----CeEEEcCCcEEecceEEEecCCCCc
Q 013810 298 -GVRLVRGIVKDVDS-----QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 298 -gV~i~~~~v~~i~~-----~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
++.++...+..+.. ..+.+.+|+++.+|.||+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 46666665554432 2477889999999999999998875
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.01 E-value=9e-06 Score=80.82 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=68.4
Q ss_pred CCcEEEECCchHHHHHHHhccc----CCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT----SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL 137 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~----~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (436)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.... ..+ . ..+........+..++.++.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-----~~l----~-----~~~~~~~~~~l~~~GV~v~~ 245 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-----KIL----P-----EYLSNWTMEKVRREGVKVMP 245 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-----TTS----C-----HHHHHHHHHHHHTTTCEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-----ccC----C-----HHHHHHHHHHHHhcCCEEEe
Confidence 4789999999999999999976 5789999998754211 000 0 01111122234557888887
Q ss_pred e-EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 138 S-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 138 ~-~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
+ +|+.++.+++.+.+. ..+|+ ++.+|.||+|+|..|+.
T Consensus 246 ~~~V~~i~~~~~~~~v~-l~dG~--------~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 246 NAIVQSVGVSSGKLLIK-LKDGR--------KVETDHIVAAVGLEPNV 284 (493)
T ss_dssp SCCEEEEEEETTEEEEE-ETTSC--------EEEESEEEECCCEEECC
T ss_pred CCEEEEEEecCCeEEEE-ECCCC--------EEECCEEEECCCCCccH
Confidence 6 788887555544433 34665 89999999999998765
No 230
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.00 E-value=2.9e-05 Score=74.93 Aligned_cols=89 Identities=17% Similarity=0.282 Sum_probs=67.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-C-----------------c------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-S-----------------S------------ 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-~-----------------~------------ 281 (436)
+|+|||+|++|+.+|..+++.+ .+|+++++.+.. . .
T Consensus 6 dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 7999999999999999999866 789999885321 0 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhcCCEEEecc-eEEEe-C-----Ce--EEEc
Q 013810 282 -----------------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVD-S-----QK--LILN 317 (436)
Q Consensus 282 -----------------------------------~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~-~-----~~--v~~~ 317 (436)
...++.+.+.+.+++.||+++.++ ++++. . +. |.+.
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~ 151 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN 151 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC
Confidence 123344566777888899999984 87775 2 33 4445
Q ss_pred CCcEEecceEEEecCCCC
Q 013810 318 DGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 318 ~g~~i~~D~vi~a~G~~p 335 (436)
+| ++.+|.||+|+|..+
T Consensus 152 ~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 152 ST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp TE-EEEESEEEECCCCSS
T ss_pred CC-EEECCEEEECCCCcc
Confidence 55 799999999999988
No 231
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.00 E-value=3.2e-06 Score=82.31 Aligned_cols=52 Identities=12% Similarity=0.209 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEeC--CeEEEcCCcEEecceEEEecCCCC
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
..+.+.+.+.+++.|+++++++ |++|+. ++++..+|+++.+|.||+|+|...
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHH
Confidence 5777888888999999999995 988864 455567788899999999998643
No 232
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.00 E-value=4.5e-06 Score=79.46 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=35.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCC-Cccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~-~~~~~ 99 (436)
..++|+|||||+|||+||..|++.|++|+|+|++ +..+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4579999999999999999999999999999998 66543
No 233
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.00 E-value=3.4e-06 Score=82.15 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEe--CCeE--EEcCCcEEecceEEEecCCCCc
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~v--~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
..+.+.+.+.+++.|+++++++ |++|. ++++ +..+|+++.+|.||+|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIADDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEECCEEEECCEEEECCCHHHH
Confidence 4677888889999999999995 88875 3433 2335788999999999986543
No 234
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.00 E-value=3.1e-06 Score=84.83 Aligned_cols=39 Identities=31% Similarity=0.338 Sum_probs=35.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceec
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT 100 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~ 100 (436)
++||+|||||+|||+||..|++.|++|+|+|+++..+..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 478999999999999999999999999999999876543
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.99 E-value=2e-05 Score=73.10 Aligned_cols=91 Identities=23% Similarity=0.304 Sum_probs=70.7
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----C-------------Ccc-----cHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L-------------SSF-----DDRLRHY 289 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----l-------------~~~-----~~~~~~~ 289 (436)
.|+|||+|+.|+.+|..+++.+ .+|+++++... + +.+ ++++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 6999999999999999999876 88999987431 1 111 2456677
Q ss_pred HHHHHHhcCCEEEecceEEEeC----CeEEEcCCcEEecceEEEecCCCCc
Q 013810 290 ATTQLSKSGVRLVRGIVKDVDS----QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~v~~i~~----~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.+.+++.++++....+..... ..+.+.++.++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 7788888999998887655543 2356678889999999999998775
No 236
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.99 E-value=4.2e-06 Score=79.69 Aligned_cols=35 Identities=31% Similarity=0.314 Sum_probs=32.6
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 45899999999999999999999999999999875
No 237
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.99 E-value=2e-05 Score=78.13 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=71.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCc------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------------------------------ 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~------------------------------ 281 (436)
.|+|||+|+.|+.+|..|++.+ .+|+|++++.+...
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~ 93 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALG--------------KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGW 93 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTB
T ss_pred CEEEECcCHHHHHHHHHHHhCc--------------CEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCc
Confidence 7999999999999999999876 89999998532100
Q ss_pred ------cc------------HHHHHHHHHHHHhcCCEEEecceEEEeCCeEEEc-CCcEEecceEEEecCCCCc
Q 013810 282 ------FD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 282 ------~~------------~~~~~~~~~~l~~~gV~i~~~~v~~i~~~~v~~~-~g~~i~~D~vi~a~G~~p~ 336 (436)
++ ..+...+.+.+++.+|+++.+.+..++...+.+. +++++.+|.+++|+|..|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 94 KYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcc
Confidence 00 0222334556777899999998888888888887 7889999999999998765
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.98 E-value=2e-05 Score=78.92 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=72.7
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC---CCC--------C----cccHHHHHHHHHHHH
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------S----SFDDRLRHYATTQLS 295 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~---~~l--------~----~~~~~~~~~~~~~l~ 295 (436)
.+|+|||||+.|+.+|..|++.+ .+|+++++. ... . ...+++.+.+.+.++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 37999999999999999998765 889999752 111 0 123567777888888
Q ss_pred hcCCEEEec-ceEEEeC-------CeEEEcCCcEEecceEEEecCCCCc
Q 013810 296 KSGVRLVRG-IVKDVDS-------QKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 296 ~~gV~i~~~-~v~~i~~-------~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.||+++.+ ++..++. ..|.+.+|+++.+|.||+|+|..|.
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 999999999 5888853 2467788889999999999998765
No 239
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.98 E-value=2e-06 Score=84.95 Aligned_cols=38 Identities=18% Similarity=0.277 Sum_probs=34.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCC------CeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g------~~v~lie~~~~~~~ 99 (436)
++||+|||||++||+||++|++.| ++|+|+|+.+..+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999876543
No 240
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.97 E-value=2.5e-06 Score=85.49 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=35.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCCcceec
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVFT 100 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~~~~~~ 100 (436)
.+||+|||||+|||+||..|++.| ++|+|+|+++..+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999 999999999876543
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.96 E-value=1.1e-05 Score=79.48 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=68.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+. +.+ + ..+........+..++.++.+ +|
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--~~~--------~-----~~~~~~l~~~l~~~Gv~i~~~~~v 234 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--SRF--------D-----QDMRRGLHAAMEEKGIRILCEDII 234 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TTS--------C-----HHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--ccc--------C-----HHHHHHHHHHHHHCCCEEECCCEE
Confidence 4789999999999999999999999999999886522 000 0 111122222234568888874 78
Q ss_pred EeEeCCCCE-EEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCC
Q 013810 141 AGIDTDNHV-VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (436)
Q Consensus 141 ~~id~~~~~-v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~ 186 (436)
..++.+.+. +.+....+| ++.+|.||+|+|..|+...
T Consensus 235 ~~i~~~~~~~~~v~~~~~g---------~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 235 QSVSADADGRRVATTMKHG---------EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEEEECTTSCEEEEESSSC---------EEEESEEEECSCEEESCTT
T ss_pred EEEEEcCCCEEEEEEcCCC---------eEEeCEEEEeeCcccCCCC
Confidence 888765332 333212234 4889999999999876653
No 242
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.95 E-value=3.1e-06 Score=81.64 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=32.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 37999999999999999999999999999999764
No 243
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=1.6e-05 Score=78.90 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=66.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++++|||||+.|+.+|..|++.|.+|+++++...+ ... ...+........+..++.++.+ +|
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l------~~~----------d~~~~~~l~~~l~~~Gv~i~~~~~v 250 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL------RGF----------DQQMAELVAASMEERGIPFLRKTVP 250 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS------TTS----------CHHHHHHHHHHHHHTTCCEEETEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC------ccc----------CHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 368999999999999999999999999999874321 100 0111122222234567888775 77
Q ss_pred EeEeCCC-CE--EEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDN-HV--VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~-~~--v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++... +. +.+....++. +.++.+|.||+|+|..|+..
T Consensus 251 ~~i~~~~~~~~~v~~~~~~~~~------~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 251 LSVEKQDDGKLLVKYKNVETGE------ESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEECTTSCEEEEEEETTTCC------EEEEEESEEEECSCEEECCG
T ss_pred EEEEEcCCCcEEEEEecCCCCc------eeEEEcCEEEECcccccCcC
Confidence 7887533 22 3333211122 22689999999999887653
No 244
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.93 E-value=6.1e-06 Score=81.96 Aligned_cols=39 Identities=28% Similarity=0.246 Sum_probs=35.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
..+||+|||||+|||+||..|++.|++|+|+|+.+..+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 357999999999999999999999999999999887543
No 245
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.92 E-value=1.8e-05 Score=77.98 Aligned_cols=86 Identities=10% Similarity=-0.034 Sum_probs=61.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEeEeE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCA 141 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 141 (436)
.++|+|||||++|+.+|..|++.|.+|+|+++.+...... + ..++.++ ..|.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~~--------------~-------------~~~V~~~-~~V~ 248 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGYK--------------W-------------PENWDER-PNLV 248 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCCC--------------C-------------CTTEEEC-SCEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCCC--------------C-------------CCceEEc-CCeE
Confidence 4789999999999999999999999999999876521000 0 0234443 4566
Q ss_pred eEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCCCCC
Q 013810 142 GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (436)
Q Consensus 142 ~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~~i~ 188 (436)
.++. +.+.+ .+|+ ++.+|.||+|||..|..+-++
T Consensus 249 ~i~~--~~V~~---~dG~--------~i~~D~Vi~atG~~p~~~~l~ 282 (464)
T 2xve_A 249 RVDT--ENAYF---ADGS--------SEKVDAIILCTGYIHHFPFLN 282 (464)
T ss_dssp EECS--SEEEE---TTSC--------EEECSEEEECCCBCCCCTTBC
T ss_pred EEeC--CEEEE---CCCC--------EEeCCEEEECCCCCCCCCCcC
Confidence 6642 34554 3676 789999999999988765443
No 246
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.92 E-value=5.4e-06 Score=80.11 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=35.3
Q ss_pred CCcEEEECCchHHHHHHHhcccC-CCeEEEEcCCCcceec
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFT 100 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~-g~~v~lie~~~~~~~~ 100 (436)
++||+|||||++||+||..|++. |++|+|+|+++..+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 58999999999999999999998 9999999999876443
No 247
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.92 E-value=4.1e-05 Score=73.76 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=67.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 280 (436)
+|+|||+|++|+.+|..|++.+ .+|+++++.+...
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 73 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGR 73 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCE
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCC
Confidence 7999999999999999999865 6677776632110
Q ss_pred ------------------------------cccHHHHHHHHHHHHhc-CCEEEecc-eEEEeC--C----eEEEcCCcEE
Q 013810 281 ------------------------------SFDDRLRHYATTQLSKS-GVRLVRGI-VKDVDS--Q----KLILNDGTEV 322 (436)
Q Consensus 281 ------------------------------~~~~~~~~~~~~~l~~~-gV~i~~~~-v~~i~~--~----~v~~~~g~~i 322 (436)
.....+.+.+.+.+++. |++++.++ |++++. + .|++.+|+++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 74 VRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp EECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 00124455666777777 89999884 888753 2 5677888899
Q ss_pred ecceEEEecCCCCc
Q 013810 323 PYGLLVWSTGVGPS 336 (436)
Q Consensus 323 ~~D~vi~a~G~~p~ 336 (436)
.+|.||.|.|....
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999998764
No 248
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.92 E-value=4.6e-05 Score=70.78 Aligned_cols=91 Identities=19% Similarity=0.176 Sum_probs=68.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----C--------Ccc----cHHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L--------SSF----DDRLRHYATTQLS 295 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~----l--------~~~----~~~~~~~~~~~l~ 295 (436)
.|+|||+|+.|+.+|..+++.+ .+|+|++++.+ + +.+ .+++.....+...
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 6999999999999999999876 89999998532 1 111 2456666667777
Q ss_pred hcCCEEEecc-eEEE--eCCeEEEcCCcEEecceEEEecCCCCc
Q 013810 296 KSGVRLVRGI-VKDV--DSQKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 296 ~~gV~i~~~~-v~~i--~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+.++.+..+. +... ....+...+++++.+|.+|+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred hccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC
Confidence 7788887774 3222 234566678889999999999998876
No 249
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.92 E-value=5.7e-06 Score=81.91 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=34.5
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
...+||+|||||++||+||..|++.|++|+|+|+++..+.
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 3458999999999999999999999999999999987643
No 250
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=1.9e-05 Score=78.33 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=66.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
..+|+|||||+.|+.+|..|++.|.+|+++++...+ ... ...+.+......+..++.++.+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l------~~~----------d~~~~~~l~~~l~~~gv~~~~~~~v 248 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL------RGF----------DQQMSSLVTEHMESHGTQFLKGCVP 248 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS------TTS----------CHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc------ccC----------CHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 367999999999999999999999999999985321 100 0111222222334568888776 67
Q ss_pred EeEeC-CCCE--EEEEEecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDT-DNHV--VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~-~~~~--v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..+.. +.+. +.+....+|+ +.++.+|.||+|+|..|+..
T Consensus 249 ~~i~~~~~~~~~v~~~~~~~g~------~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 249 SHIKKLPTNQLQVTWEDHASGK------EDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEECTTSCEEEEEEETTTTE------EEEEEESEEEECSCEEESCG
T ss_pred EEEEEcCCCcEEEEEEeCCCCe------eEEEECCEEEEcccCCcccC
Confidence 77764 2333 3333211232 12578999999999887654
No 251
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.90 E-value=5.4e-06 Score=79.59 Aligned_cols=73 Identities=19% Similarity=0.224 Sum_probs=51.1
Q ss_pred cEEEEEeCCC-CCCcccHHHHHHHHHHHHhcCCEEEec-ceEEEeC--Ce--EEEcCCcEEecceEEEecCCCCchhccc
Q 013810 268 IHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVKS 341 (436)
Q Consensus 268 ~~V~lv~~~~-~l~~~~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~--v~~~~g~~i~~D~vi~a~G~~p~~~~~~ 341 (436)
....++.+.. .+. +..+.+.+.+.+++.|++++.+ +|++++. ++ |.+.+| ++.+|.||+|+|.....++..
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~ 211 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSK 211 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGG
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhh
Confidence 5566666532 221 3567778888889999999998 4888753 33 444444 799999999999876656555
Q ss_pred CC
Q 013810 342 LD 343 (436)
Q Consensus 342 ~~ 343 (436)
++
T Consensus 212 ~g 213 (389)
T 2gf3_A 212 LN 213 (389)
T ss_dssp GT
T ss_pred hc
Confidence 44
No 252
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.90 E-value=3.5e-06 Score=82.83 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=34.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
++||+|||||++||+||..|++.|++|+|+|+++..+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 47999999999999999999999999999999877543
No 253
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.89 E-value=1.6e-05 Score=78.55 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=64.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. ..+ ..+...+.+ .. .+.++.+ +|
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------~~d-~~~~~~l~~----~l---~v~i~~~~~v 234 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT---------LED-QDIVNTLLS----IL---KLNIKFNSPV 234 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------SCC-HHHHHHHHH----HH---CCCEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC---------CCC-HHHHHHHHh----cC---EEEEEECCEE
Confidence 478999999999999999999999999999987653110 000 011111111 11 1555554 66
Q ss_pred EeEeCCC-CEEEEEEec-CCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTDN-HVVHCETVT-DELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~~-~~v~~~~~~-~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..++... +.+.+.... +|+ +.++.+|.||+|+|.+|+..
T Consensus 235 ~~i~~~~~~~v~v~~~~~~G~------~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 235 TEVKKIKDDEYEVIYSTKDGS------KKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp EEEEEEETTEEEEEECCTTSC------CEEEEESCEEECCCEEECCC
T ss_pred EEEEEcCCCcEEEEEEecCCc------eEEEEcCEEEECcCCCcccc
Confidence 7776544 445443321 332 12689999999999988765
No 254
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.88 E-value=7.4e-06 Score=78.61 Aligned_cols=39 Identities=26% Similarity=0.350 Sum_probs=35.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
..+||+|||||++|++||..|++.|.+|+|+|+.+..+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 458999999999999999999999999999999877543
No 255
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.88 E-value=4.5e-05 Score=76.68 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=70.2
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------C-------------c--------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S-------------S-------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~-------------~-------- 281 (436)
+|+|||+|.+|+.+|..|.+.+ .+|+++++.+.+ + .
T Consensus 23 dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~ 88 (549)
T 4ap3_A 23 DVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQE 88 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHH
T ss_pred CEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccC
Confidence 7999999999999999998765 799999984211 0 0
Q ss_pred --------ccHHHHHHHHHHHHhcCC--EEEec-ceEEEe--CC----eEEEcCCcEEecceEEEecC--CCCc
Q 013810 282 --------FDDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTG--VGPS 336 (436)
Q Consensus 282 --------~~~~~~~~~~~~l~~~gV--~i~~~-~v~~i~--~~----~v~~~~g~~i~~D~vi~a~G--~~p~ 336 (436)
..+++.+++.+.+++.++ +++.+ +|++++ ++ .|.+.+|+++.+|.||+|+| ..|.
T Consensus 89 ~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 89 WNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp CCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred CCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 124666777788888888 77777 477774 33 67888999999999999999 4444
No 256
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.87 E-value=2.7e-05 Score=77.95 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=63.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
..+|+|||||+.|+.+|..|++.|.+|+|+++... +... + ..+........+..++.++.+ .+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~------l~~~-----d-----~~~~~~~~~~l~~~GV~v~~~~~v 273 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL------LRGF-----D-----QDMANKIGEHMEEHGIKFIRQFVP 273 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS-----C-----HHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc------cccC-----C-----HHHHHHHHHHHHHCCCEEEeCCeE
Confidence 35799999999999999999999999999997421 1100 0 111222222234568888765 44
Q ss_pred EeEeCC----CCEEEEEE-ecCCcccCCCCceeeeccEEEEeCCCCCCCC
Q 013810 141 AGIDTD----NHVVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (436)
Q Consensus 141 ~~id~~----~~~v~~~~-~~~g~~~~~~~~~~~~~d~lViAtG~~~~~~ 185 (436)
..+... ...+.+.. ..++.. +.++.+|.||+|+|..|+..
T Consensus 274 ~~v~~~~~~~~~~~~v~~~~~~g~~-----~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 274 IKVEQIEAGTPGRLRVVAQSTNSEE-----IIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp EEEEEEECCTTCEEEEEEEESSSSC-----EEEEEESEEEECSCEEESCS
T ss_pred EEEEEccCCCCceEEEEEEECCCcE-----EEEEECCEEEEecCCcccCC
Confidence 444321 13333321 123321 12578999999999988664
No 257
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.86 E-value=6.9e-06 Score=82.08 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=34.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
..+||||||||+|||+||+.|++.|.+|+||||.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3479999999999999999999999999999998765
No 258
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.86 E-value=7.3e-06 Score=78.64 Aligned_cols=35 Identities=20% Similarity=0.409 Sum_probs=32.2
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCcc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~~ 97 (436)
+||+|||||+||+++|..|++. |++|+|||+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999998 9999999998654
No 259
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.85 E-value=5e-05 Score=76.21 Aligned_cols=88 Identities=15% Similarity=0.235 Sum_probs=68.3
Q ss_pred cEEEECCChHHHHHHHHHH-HHHHHHHHhhhcCCCCccEEEEEeCCC-CC--------Cc-------------c------
Q 013810 232 HCVVVGGGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------SS-------------F------ 282 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~-~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l--------~~-------------~------ 282 (436)
+|+|||+|++|+.+|..|+ +.+ .+|+++++.+ +. +. +
T Consensus 10 dVvIIGaG~aGl~aA~~L~~~~G--------------~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~ 75 (540)
T 3gwf_A 10 DAVVIGAGFGGIYAVHKLHHELG--------------LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQ 75 (540)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--------------CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHcCC--------------CCEEEEECCCCCCCcccccCCCCceecCCcceeeecccccccc
Confidence 7999999999999999998 654 7999999843 11 10 0
Q ss_pred ----------cHHHHHHHHHHHHhcCC--EEEecc-eEEEe--CC----eEEEcCCcEEecceEEEecCC
Q 013810 283 ----------DDRLRHYATTQLSKSGV--RLVRGI-VKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 333 (436)
Q Consensus 283 ----------~~~~~~~~~~~l~~~gV--~i~~~~-v~~i~--~~----~v~~~~g~~i~~D~vi~a~G~ 333 (436)
.+++.+.+.+.+++.|+ +++.++ |.+++ ++ .|.+.+|+++.+|.||+|+|.
T Consensus 76 ~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 76 ESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred CCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 23566777788888888 788774 77764 33 577889999999999999995
No 260
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.85 E-value=8.9e-05 Score=72.67 Aligned_cols=90 Identities=22% Similarity=0.375 Sum_probs=67.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--------------------c----------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------------------S---------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~--------------------~---------- 281 (436)
.|+|||+|.+|+-+|..|++.+ .+|+|+++.+... .
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~ 93 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR 93 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG
T ss_pred CEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH
Confidence 7999999999999999999765 7899998743110 0
Q ss_pred --------c------------------------------cHHHHHHHHHHHHhcCCEEEecc-eEEEe--CC---eEEEc
Q 013810 282 --------F------------------------------DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQ---KLILN 317 (436)
Q Consensus 282 --------~------------------------------~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~---~v~~~ 317 (436)
+ ...+.+.+.+.+++.||+++.++ |+++. ++ .|.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 94 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp GGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred HHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0 02333455666778899999884 77774 33 36777
Q ss_pred CCcEEecceEEEecCCCC
Q 013810 318 DGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 318 ~g~~i~~D~vi~a~G~~p 335 (436)
+|+++.+|.||+|+|..+
T Consensus 174 ~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 174 TGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TCCEEECSCEEECCCCSS
T ss_pred CCCEEECCEEEECCCCCc
Confidence 887899999999999877
No 261
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.84 E-value=4.6e-05 Score=75.00 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=66.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--------c----------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------S---------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~--------~---------------------- 281 (436)
+|+|||+|+.|+.+|..|++.+... .+ .+|+++++.+.+. .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999865100 00 5899998854110 0
Q ss_pred ----------------------ccHHHHHHHHHHHHhcCCEEEecc-eEEEeCC---------eEEEcCCc----EEecc
Q 013810 282 ----------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ---------KLILNDGT----EVPYG 325 (436)
Q Consensus 282 ----------------------~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~~---------~v~~~~g~----~i~~D 325 (436)
...++.+++....++.+++++.++ |.+++.. .|.+.+|+ ++.+|
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d 182 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR 182 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC
Confidence 012344455555666788998885 7777532 45556665 89999
Q ss_pred eEEEecCCCCc
Q 013810 326 LLVWSTGVGPS 336 (436)
Q Consensus 326 ~vi~a~G~~p~ 336 (436)
.||+|+|..|.
T Consensus 183 ~lVlAtG~~p~ 193 (463)
T 3s5w_A 183 ALVVSPGGTPR 193 (463)
T ss_dssp EEEECCCCEEC
T ss_pred EEEECCCCCCC
Confidence 99999998775
No 262
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.84 E-value=9.4e-06 Score=80.28 Aligned_cols=38 Identities=13% Similarity=0.255 Sum_probs=34.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--CeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--~~v~lie~~~~~~~ 99 (436)
++||+|||||++||+||.+|++.| ++|+|+|+++..+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 579999999999999999999999 99999999876543
No 263
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.84 E-value=1.1e-05 Score=80.33 Aligned_cols=38 Identities=16% Similarity=0.353 Sum_probs=34.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
.+||+|||||+|||+||..|++.|++|+|+|+++..+.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 37999999999999999999999999999999987654
No 264
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.83 E-value=1.5e-05 Score=78.32 Aligned_cols=89 Identities=18% Similarity=0.184 Sum_probs=66.5
Q ss_pred ccCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC--------Cc--ccHHHHHHHHHHHHhcC
Q 013810 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL--------SS--FDDRLRHYATTQLSKSG 298 (436)
Q Consensus 229 ~~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l--------~~--~~~~~~~~~~~~l~~~g 298 (436)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+ +. ++.++.+...+.+++.|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~g 186 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAG 186 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence 3458999999999999999999876 899999986422 22 35566677778889999
Q ss_pred CEEEecceEEEeCCeEEEcCCcEEecceEEEecCCCC
Q 013810 299 VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 299 V~i~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
|+++.++... ..+.++++ .+.+|.||+|+|..+
T Consensus 187 v~~~~~~~v~---~~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 187 VIYHPNFEVG---RDASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp CEEETTCCBT---TTBCHHHH-HSSCSEEEECCCCCE
T ss_pred cEEEeCCEec---cEEEhhHh-HhhCCEEEEecCCCC
Confidence 9999885221 22333333 367999999999864
No 265
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.83 E-value=5.5e-05 Score=75.99 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=68.7
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------C----------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S---------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~---------------------- 280 (436)
+|+|||+|++|+.+|..|.+.+ .+|+++++.+.+ +
T Consensus 11 dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~ 76 (545)
T 3uox_A 11 DAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPE 76 (545)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTT
T ss_pred CEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccC
Confidence 7999999999999999998755 789999985311 0
Q ss_pred -------cccHHHHHHHHHHHHhcCC--EEEec-ceEEEe--CC----eEEEcCCcEEecceEEEecC--CCCc
Q 013810 281 -------SFDDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTG--VGPS 336 (436)
Q Consensus 281 -------~~~~~~~~~~~~~l~~~gV--~i~~~-~v~~i~--~~----~v~~~~g~~i~~D~vi~a~G--~~p~ 336 (436)
...+++.+.+.+..++.++ .++.+ +|.+++ ++ .|.+.+|+++.+|.||+|+| ..|.
T Consensus 77 ~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 77 WEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp CCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred CCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 0125667777777788787 67776 477764 23 67888999999999999999 4554
No 266
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.83 E-value=8e-06 Score=81.92 Aligned_cols=35 Identities=11% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCCcEEEECCchHHHHHHHhccc------------CCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDT------------SLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~------------~g~~v~lie~~~ 95 (436)
..++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35799999999999999999999 899999999865
No 267
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.82 E-value=1.2e-05 Score=80.23 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=34.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
++||+|||||++||+||..|++.|++|+|+|+++..+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 57999999999999999999999999999999987643
No 268
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.82 E-value=1.3e-05 Score=77.03 Aligned_cols=38 Identities=16% Similarity=0.392 Sum_probs=34.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
+++|+|||||++|+++|..|++.|++|+|+|+++..+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 37999999999999999999999999999999877543
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.80 E-value=2.1e-05 Score=78.26 Aligned_cols=91 Identities=15% Similarity=0.348 Sum_probs=62.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------CC-----cccH-HHHHHHHHHH--Hhc
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS-----SFDD-RLRHYATTQL--SKS 297 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------l~-----~~~~-~~~~~~~~~l--~~~ 297 (436)
+|||||+|+.|+.+|..|.. .+.+|+||++.+. ++ .+++ ++...+.+.+ ++.
T Consensus 44 rVVIIGgG~AGl~~A~~L~~--------------~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~ 109 (502)
T 4g6h_A 44 NVLILGSGWGAISFLKHIDT--------------KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKG 109 (502)
T ss_dssp EEEEECSSHHHHHHHHHSCT--------------TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSS
T ss_pred CEEEECCcHHHHHHHHHhhh--------------CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcC
Confidence 89999999999999988754 3489999998642 11 1111 1111122222 245
Q ss_pred CCEEEecceEEEeC--CeEEE--------------------cCCcEEecceEEEecCCCCc
Q 013810 298 GVRLVRGIVKDVDS--QKLIL--------------------NDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 298 gV~i~~~~v~~i~~--~~v~~--------------------~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++++.+++++|+. ..|.+ .++.++++|.+|+|+|..|+
T Consensus 110 ~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~ 170 (502)
T 4g6h_A 110 NVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPN 170 (502)
T ss_dssp CEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEEC
T ss_pred CeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccc
Confidence 79999888888864 34543 24668999999999999887
No 270
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.80 E-value=1.4e-05 Score=80.67 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=32.9
Q ss_pred CCCcEEEECCchHHHHHHHhccc---CCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~~ 96 (436)
..++|||||||+||+++|..|++ .|++|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 35799999999999999999999 9999999998754
No 271
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.79 E-value=1.2e-05 Score=76.73 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=33.7
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
+||+|||||++|++||..|++.|++|+|+|+++..+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 6899999999999999999999999999999876543
No 272
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.78 E-value=1.4e-05 Score=75.41 Aligned_cols=33 Identities=27% Similarity=0.195 Sum_probs=31.6
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+||+|||||+||+.||+.|++.|++|+|||+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 689999999999999999999999999999876
No 273
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.77 E-value=1.4e-05 Score=79.29 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=34.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~~~~~ 99 (436)
.+++|+|||||++||+||..|++.| .+|+|+|+++..+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 4589999999999999999999998 79999999887543
No 274
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.75 E-value=1.8e-05 Score=78.83 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=35.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
..++|+|||||++||+||..|++.|++|+|+|+.+..+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357999999999999999999999999999999877544
No 275
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.75 E-value=2.8e-05 Score=80.58 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=66.6
Q ss_pred CCcEEEEC--CchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-
Q 013810 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS- 138 (436)
Q Consensus 62 ~~~VvIIG--gG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (436)
.++|+||| ||+.|+.+|..|++.|.+|+++++.+.+.-. . ........+ ....+..++.++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~-----~-----~~~~~~~~l----~~~l~~~GV~i~~~~ 588 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW-----T-----NNTFEVNRI----QRRLIENGVARVTDH 588 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG-----G-----GGGTCHHHH----HHHHHHTTCEEEESE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc-----c-----ccchhHHHH----HHHHHHCCCEEEcCc
Confidence 46799999 9999999999999999999999987652110 0 000001111 11233468888876
Q ss_pred EeEeEeCCCCEEEEEEecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
+|+.++.+. +.+.....+. ..++.+|.||+|+|..|+.
T Consensus 589 ~V~~i~~~~--~~v~~~~~~~------~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 589 AVVAVGAGG--VTVRDTYASI------ERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEEEETTE--EEEEETTTCC------EEEEECSEEEEESCEEECC
T ss_pred EEEEEECCe--EEEEEccCCe------EEEEECCEEEECCCCCCCh
Confidence 888887654 3333222221 1278999999999988753
No 276
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.73 E-value=0.0001 Score=70.47 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecCCCCchhcccCCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 344 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l 344 (436)
.+.+.+.+.+++.|++++.++ |.+++. + .|.+.+| ++.+|.||+|+|.....+...+++
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~ 228 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGL 228 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCC
Confidence 345566777778899999884 888753 2 2555566 799999999999876655555443
No 277
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.73 E-value=1.3e-05 Score=80.03 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.6
Q ss_pred CCcEEEECCchHHHHHHHhccc---CCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~---~g~~v~lie~~~ 95 (436)
.++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3799999999999999999999 999999999865
No 278
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.73 E-value=0.00016 Score=73.13 Aligned_cols=91 Identities=19% Similarity=0.241 Sum_probs=68.1
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC------------------------c-----
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------------------------S----- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~------------------------~----- 281 (436)
.|+|||||..|+++|..+++.| .+|.|+++.. .+. .
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 7999999999999999999876 8899998752 110 0
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-cCCEEEecceEEEe--CC---eEEEcCCcEEecceEEE
Q 013810 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (436)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~ 329 (436)
.+ ..+.+.+.+.+++ .||+++...|.++. ++ +|.+.+|.++.+|.||+
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEE
Confidence 00 1244556667777 69999766788874 33 46778888899999999
Q ss_pred ecCCCCc
Q 013810 330 STGVGPS 336 (436)
Q Consensus 330 a~G~~p~ 336 (436)
|+|..+.
T Consensus 176 ATGt~s~ 182 (651)
T 3ces_A 176 TVGTFLD 182 (651)
T ss_dssp CCSTTTC
T ss_pred cCCCCcc
Confidence 9998653
No 279
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.72 E-value=1.6e-05 Score=79.30 Aligned_cols=34 Identities=15% Similarity=0.332 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+||+|||||++|+++|+.|+++|++|+|||+.+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999999999999999999999999999975
No 280
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.72 E-value=1.2e-05 Score=76.09 Aligned_cols=34 Identities=29% Similarity=0.352 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHhcccCC------CeEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g------~~v~lie~~~~ 96 (436)
+||+|||||++|+++|+.|++.| .+|+|||+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999987 89999999753
No 281
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.72 E-value=0.00011 Score=71.31 Aligned_cols=90 Identities=17% Similarity=0.300 Sum_probs=65.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC---------c---------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------S--------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~---------~--------------------- 281 (436)
+|+|||||++|+-+|..|++.+ .+|+|+++.+... .
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 7999999999999999998765 7888888743100 0
Q ss_pred ------------------------------c-cHHHHHHHHHHHHhcCCEEEec-ceEEEeC--Ce----EEEcCCc--E
Q 013810 282 ------------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK----LILNDGT--E 321 (436)
Q Consensus 282 ------------------------------~-~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~--~~----v~~~~g~--~ 321 (436)
+ ...+.+.+.+.+++.|++++.+ +|++++. ++ +.+.+|+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKRE 152 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEE
Confidence 0 1234455666777789999998 4877753 32 3446787 6
Q ss_pred EecceEEEecCCCC
Q 013810 322 VPYGLLVWSTGVGP 335 (436)
Q Consensus 322 i~~D~vi~a~G~~p 335 (436)
+.+|.||.|+|...
T Consensus 153 ~~a~~vV~A~G~~s 166 (421)
T 3nix_A 153 IEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEECCGGGC
T ss_pred EEcCEEEECCCCch
Confidence 99999999999764
No 282
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.67 E-value=2.4e-05 Score=84.56 Aligned_cols=91 Identities=18% Similarity=0.330 Sum_probs=68.5
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCCC--------C--cccHHHHHHHHHHHHhcC
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEIL--------S--SFDDRLRHYATTQLSKSG 298 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~l--------~--~~~~~~~~~~~~~l~~~g 298 (436)
.++|+|||+|+.|+.+|..|++.+ . +|+|+++.+.+ + .++.+..++..+.+++.|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~g 252 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLG 252 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTT
T ss_pred CCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCC
Confidence 468999999999999999999866 6 79999986422 1 234455566667888999
Q ss_pred CEEEecceEEEeCCeEEEcCCcEEecceEEEecCC-CCc
Q 013810 299 VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPS 336 (436)
Q Consensus 299 V~i~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~-~p~ 336 (436)
|+++.++... ...+.+++++++.+|.||+|+|. +|.
T Consensus 253 v~~~~~~~v~--~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 253 VKIICGKSLS--ENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp CEEEESCCBS--TTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred cEEEcccEec--cceEEhhhcCccCCCEEEEecCCCCCC
Confidence 9999986321 13455556666889999999998 465
No 283
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.66 E-value=1.2e-05 Score=78.92 Aligned_cols=60 Identities=27% Similarity=0.380 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCCEEEec-ceEEEeC-----------------C---eEEEcCCcEE--ecceEEEecCCCCchhcc
Q 013810 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS-----------------Q---KLILNDGTEV--PYGLLVWSTGVGPSTLVK 340 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~-~v~~i~~-----------------~---~v~~~~g~~i--~~D~vi~a~G~~p~~~~~ 340 (436)
..+.+.+.+.+++.|++++.+ +|+++.. + .|.+.+| ++ .+|.||+|+|.....++.
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~~ 259 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLLN 259 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHHG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHHH
Confidence 477778888889999999998 4887753 2 3556677 68 999999999987655555
Q ss_pred cCCC
Q 013810 341 SLDL 344 (436)
Q Consensus 341 ~~~l 344 (436)
.+++
T Consensus 260 ~~g~ 263 (448)
T 3axb_A 260 PLGI 263 (448)
T ss_dssp GGTC
T ss_pred HcCC
Confidence 5443
No 284
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.66 E-value=7.3e-05 Score=76.16 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=61.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
..+|+|||||+.|+.+|..|++.|.+|+|+++... +... + . .+........+..++.++.+ .+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~------l~~~-----d-~----~~~~~~~~~l~~~gv~i~~~~~v 349 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSIL------LRGF-----D-Q----QMAEKVGDYMENHGVKFAKLCVP 349 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STTS-----C-H----HHHHHHHHHHHHTTCEEEETEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcC------cCcC-----C-H----HHHHHHHHHHHhCCCEEEECCeE
Confidence 35899999999999999999999999999998621 1100 0 0 11111111233457888765 44
Q ss_pred EeEeC------C---CCEEEEEE-ecCCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDT------D---NHVVHCET-VTDELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~------~---~~~v~~~~-~~~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..+.. . .+.+.+.. ..+|+ +..+.+|.||+|+|.+|+.
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~v~~~~~~g~------~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 350 DEIKQLKVVDTENNKPGLLLVKGHYTDGK------KFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp EEEEEEECCBTTTTBCCEEEEEEEETTSC------EEEEEESEEEECSCEEECG
T ss_pred EEEEeccccccccCCCceEEEEEEeCCCc------EEeccCCEEEEEeCCcccc
Confidence 44421 1 13343321 23454 1134599999999998765
No 285
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.66 E-value=0.00027 Score=67.78 Aligned_cols=91 Identities=13% Similarity=0.191 Sum_probs=67.1
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------CC--c----------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS--S---------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~------l~--~---------------------- 281 (436)
+|+|||+|++|+.+|..|++.+ .+|+++++.+. .. .
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 7999999999999999999876 77888876431 00 0
Q ss_pred -------------------------------ccHHHHHHHHHHHHhcCCEEEecc-eEEEeC-----CeEEE-cCCc--E
Q 013810 282 -------------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDS-----QKLIL-NDGT--E 321 (436)
Q Consensus 282 -------------------------------~~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~-----~~v~~-~~g~--~ 321 (436)
....+.+.+.+.+.+.|++++.+. |++++. -.|++ .+|+ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 012344456666677799999984 888753 14666 6887 7
Q ss_pred EecceEEEecCCCCc
Q 013810 322 VPYGLLVWSTGVGPS 336 (436)
Q Consensus 322 i~~D~vi~a~G~~p~ 336 (436)
+.+|+||.|.|....
T Consensus 150 ~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 150 LDCDYIAGCDGFHGI 164 (394)
T ss_dssp EECSEEEECCCTTCS
T ss_pred EEeCEEEECCCCCcH
Confidence 999999999997654
No 286
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.64 E-value=2.5e-05 Score=78.81 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+||+|||||++|+++|..|+++|++|+|+|+.+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~ 52 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDF 52 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 358999999999999999999999999999999853
No 287
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.64 E-value=0.00072 Score=63.09 Aligned_cols=159 Identities=16% Similarity=0.179 Sum_probs=96.6
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 280 (436)
.|+|||+|+.|+.+|..|++.. ++.+|+|+++.....
T Consensus 81 DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~ 148 (344)
T 3jsk_A 81 DIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE 148 (344)
T ss_dssp SEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE
T ss_pred CEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc
Confidence 7999999999999999998750 128899999853211
Q ss_pred ---c-----ccHHHHHHHHHHHHh-cCCEEEecc-eEEEe--C-----------------C-----eEEEc---------
Q 013810 281 ---S-----FDDRLRHYATTQLSK-SGVRLVRGI-VKDVD--S-----------------Q-----KLILN--------- 317 (436)
Q Consensus 281 ---~-----~~~~~~~~~~~~l~~-~gV~i~~~~-v~~i~--~-----------------~-----~v~~~--------- 317 (436)
. ...++.+.+.+.+.+ .||+++.+. +.++. + + +|++.
T Consensus 149 ~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~ 228 (344)
T 3jsk_A 149 DEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHD 228 (344)
T ss_dssp ECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSS
T ss_pred ccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCC
Confidence 0 012333455556666 599999884 55552 1 1 23321
Q ss_pred -----CCcEEecceEEEecCCCCc--h-h---cccCCCCCCCCCcEEeC---------CCCCCCCCCCEEEecccccccc
Q 013810 318 -----DGTEVPYGLLVWSTGVGPS--T-L---VKSLDLPKSPGGRIGID---------EWLRVPSVQDVFAVGDCSGYLE 377 (436)
Q Consensus 318 -----~g~~i~~D~vi~a~G~~p~--~-~---~~~~~l~~~~~G~i~vd---------~~~~~t~~~~Vya~GD~~~~~~ 377 (436)
+..++.++.||.|+|.... . + +..+++...-.|.-..+ ++.+ .-+|++|++|-.+...
T Consensus 229 ~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~-~v~~gl~~~gm~~~~~- 306 (344)
T 3jsk_A 229 DQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTR-EIVPGLIVGGMELSEI- 306 (344)
T ss_dssp SSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCE-EEETTEEECGGGHHHH-
T ss_pred cccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCc-eEcCCEEEechhhHhh-
Confidence 2247999999999998764 1 2 33344431112211111 1112 2379999999887632
Q ss_pred CCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 378 STGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 378 ~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
.|.+.+-+....=+..|+.||+-|+..
T Consensus 307 -~g~~rmgp~fg~m~~sg~~~a~~~~~~ 333 (344)
T 3jsk_A 307 -DGANRMGPTFGAMALSGVKAAHEAIRV 333 (344)
T ss_dssp -HTCEECCSCCHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCCCcccceeeecCHHHHHHHHHH
Confidence 233333445555667899999888754
No 288
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.63 E-value=0.00034 Score=70.68 Aligned_cols=50 Identities=10% Similarity=0.007 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCEEEecc-eEEEe--C-C---eEEEc--CCc--EEecceEEEecCCCCc
Q 013810 287 RHYATTQLSKSGVRLVRGI-VKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (436)
Q Consensus 287 ~~~~~~~l~~~gV~i~~~~-v~~i~--~-~---~v~~~--~g~--~i~~D~vi~a~G~~p~ 336 (436)
.+.+.+.+++.||+++.++ ++++. + + +|++. +|+ ++.+|.||+|+|-...
T Consensus 253 ~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 253 IDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3455566777899999984 77774 2 3 25554 675 6899999999997553
No 289
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.63 E-value=2.8e-05 Score=78.05 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~ 97 (436)
.+||||||||+|||+||+.|++ |.+|+|||+.+..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998643
No 290
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.62 E-value=0.00017 Score=68.91 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=39.3
Q ss_pred HHHHHHHHHhcCCEEEecc-eEEEeC--Ce---EEEcCCcEEecceEEEecCCCCchhcccCC
Q 013810 287 RHYATTQLSKSGVRLVRGI-VKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (436)
Q Consensus 287 ~~~~~~~l~~~gV~i~~~~-v~~i~~--~~---v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (436)
.+.+.+.+++.|++++.++ |++++. +. |.+.+| ++.+|.||+|+|.....+...++
T Consensus 152 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 152 TTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 3445566677899999984 888753 33 556666 79999999999987654444333
No 291
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.61 E-value=0.0004 Score=70.03 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=66.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC------c---------------c-------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------S---------------F------- 282 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~------~---------------~------- 282 (436)
.|+|||||..|+++|..+++.| .+|.|+++.. .+. . +
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 7999999999999999999876 8899998752 100 0 0
Q ss_pred --------------------------c-HHHHHHHHHHHHh-cCCEEEecceEEEe--CC---eEEEcCCcEEecceEEE
Q 013810 283 --------------------------D-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (436)
Q Consensus 283 --------------------------~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~ 329 (436)
+ ..+.+.+.+.+++ .||+++...|+++. ++ +|.+.+|.++.+|.||+
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 0 1234455666776 59999766788764 33 47788898999999999
Q ss_pred ecCCCC
Q 013810 330 STGVGP 335 (436)
Q Consensus 330 a~G~~p 335 (436)
|+|..+
T Consensus 175 ATG~~s 180 (637)
T 2zxi_A 175 TTGTFL 180 (637)
T ss_dssp CCTTCB
T ss_pred ccCCCc
Confidence 999764
No 292
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.61 E-value=0.00026 Score=65.68 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=93.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-c-----------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-S----------------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~-~----------------------------- 281 (436)
+|+|||+|+.|+.+|..|++.+ ++.+|+++++..... .
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~ 134 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE 134 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE
T ss_pred CEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc
Confidence 7999999999999999999761 128899999843211 0
Q ss_pred ---------ccHHHHHHHHHHHHh-cCCEEEecc-eEEEeC------C-----eEEEc--------------CCcEEec-
Q 013810 282 ---------FDDRLRHYATTQLSK-SGVRLVRGI-VKDVDS------Q-----KLILN--------------DGTEVPY- 324 (436)
Q Consensus 282 ---------~~~~~~~~~~~~l~~-~gV~i~~~~-v~~i~~------~-----~v~~~--------------~g~~i~~- 324 (436)
...++...+.+.+.+ .||+++.+. +.++.. + +|.+. ++.++.+
T Consensus 135 ~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~ 214 (326)
T 2gjc_A 135 DEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELA 214 (326)
T ss_dssp ECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEES
T ss_pred cCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEe
Confidence 012334445555666 499999874 666531 1 23321 3357899
Q ss_pred --------------ceEEEecCCCCc--hhccc----CCCCCCCCCc----------EEeCCCCCCCCCCCEEEeccccc
Q 013810 325 --------------GLLVWSTGVGPS--TLVKS----LDLPKSPGGR----------IGIDEWLRVPSVQDVFAVGDCSG 374 (436)
Q Consensus 325 --------------D~vi~a~G~~p~--~~~~~----~~l~~~~~G~----------i~vd~~~~~t~~~~Vya~GD~~~ 374 (436)
|.||.|+|.... .++.. ++..-.-.|- ..|+..-..+-+|++|++|-.+.
T Consensus 215 G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~ 294 (326)
T 2gjc_A 215 GYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVA 294 (326)
T ss_dssp CCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHH
T ss_pred eccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHH
Confidence 999999998764 22211 1111000010 11211111126899999999875
Q ss_pred cccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 375 YLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 375 ~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
... |.+..-+....-...|+.||+.|+..
T Consensus 295 ~~~--~~~r~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 295 ELD--GLNRMGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp HHH--TCCBCCSCCHHHHHHHHHHHHHHHHH
T ss_pred Hhc--CCCCCChhhhhhhhhhHHHHHHHHHH
Confidence 321 22222334455667899999888754
No 293
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.60 E-value=5.4e-05 Score=77.99 Aligned_cols=39 Identities=21% Similarity=0.397 Sum_probs=35.2
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
...++|+|||||++||+||..|++.|++|+|+|+.+..+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 456899999999999999999999999999999987644
No 294
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.58 E-value=4e-05 Score=74.82 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEe--CCeE--EEcCCcEEecceEEEecCCCCc
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~v--~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
..+.+.+.+.+++.|++++.++ |++|. ++++ +..+|+++.||.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 3677778888888999999984 77774 3443 2357888999999999998865
No 295
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.58 E-value=5.9e-05 Score=79.29 Aligned_cols=39 Identities=21% Similarity=0.397 Sum_probs=35.2
Q ss_pred CCCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 60 ~~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
...++|+|||||++||+||..|++.|++|+|+|+.+..+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 346899999999999999999999999999999987644
No 296
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.57 E-value=0.00024 Score=68.38 Aligned_cols=91 Identities=21% Similarity=0.258 Sum_probs=63.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-Cc------ccHHHHHHH--------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-SS------FDDRLRHYA-------------- 290 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l-~~------~~~~~~~~~-------------- 290 (436)
+|+|||||++|+.+|..|++.+ .+|+++++.+.. .. +.+...+.+
T Consensus 7 ~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (397)
T 2vou_A 7 RIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPS 72 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCC
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccc
Confidence 7999999999999999999866 899999985321 11 222222211
Q ss_pred -----------------------------HHHHHh--cCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecCCC
Q 013810 291 -----------------------------TTQLSK--SGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVG 334 (436)
Q Consensus 291 -----------------------------~~~l~~--~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~ 334 (436)
.+.|.+ .+++++.++ |++++. + .|++.+|+++.+|+||.|.|..
T Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 73 SSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp CEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred cceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 122222 267787774 777743 3 3667889899999999999987
Q ss_pred Cc
Q 013810 335 PS 336 (436)
Q Consensus 335 p~ 336 (436)
..
T Consensus 153 S~ 154 (397)
T 2vou_A 153 SV 154 (397)
T ss_dssp CH
T ss_pred hh
Confidence 54
No 297
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.56 E-value=0.00045 Score=64.58 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||+|.+|+.+|..|++.+ .+|+|+++.
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~ 34 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECC
Confidence 7999999999999999999866 899999985
No 298
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.56 E-value=6e-05 Score=74.10 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=65.3
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CC--------Ccc--cHHHHHHHHHHHHhcCC
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL--------SSF--DDRLRHYATTQLSKSGV 299 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l--------~~~--~~~~~~~~~~~l~~~gV 299 (436)
.+|+|||+|+.|+.+|..|.+.+ ++.+|+++++.+ .. +.+ ..++...+.+.+++.||
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv 74 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRC 74 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTE
T ss_pred ceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCc
Confidence 48999999999999999998753 347999999864 22 222 23556667778888999
Q ss_pred EEEecc-eEEEeCCeEEEcCCcEEecceEEEecCCCCc
Q 013810 300 RLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 300 ~i~~~~-v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+++.+. + ...|.+.+ .++.+|.||+|+|..|.
T Consensus 75 ~~~~~~~v----~~~V~~~~-~~~~~d~lVlAtGs~~~ 107 (460)
T 1cjc_A 75 AFYGNVEV----GRDVTVQE-LQDAYHAVVLSYGAEDH 107 (460)
T ss_dssp EEEBSCCB----TTTBCHHH-HHHHSSEEEECCCCCEE
T ss_pred EEEeeeEE----eeEEEecc-ceEEcCEEEEecCcCCC
Confidence 999884 3 12344433 34789999999999863
No 299
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.56 E-value=3.2e-05 Score=79.33 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+||||||||.|||+||+.|++.|.+|+|||+...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999999754
No 300
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.54 E-value=0.00048 Score=69.68 Aligned_cols=91 Identities=20% Similarity=0.295 Sum_probs=67.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC--CC-----Cc-----------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--IL-----SS----------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~l-----~~----------------------- 281 (436)
.|+|||||..|+++|..+++.| .+|.|+++.. +. +.
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 7999999999999999999876 8899998752 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-cCCEEEecceEEEe--CCe---EEEcCCcEEecceEEE
Q 013810 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQK---LILNDGTEVPYGLLVW 329 (436)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~i~~~~v~~i~--~~~---v~~~~g~~i~~D~vi~ 329 (436)
.+ ..+.+.+.+.+++ .||+++.+.+.++. ++. |.+.+|+++.+|.||+
T Consensus 89 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVL 168 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAIL 168 (641)
T ss_dssp HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEE
T ss_pred HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 00 1334455666766 49999877777754 443 6678888999999999
Q ss_pred ecCCCCc
Q 013810 330 STGVGPS 336 (436)
Q Consensus 330 a~G~~p~ 336 (436)
|+|..++
T Consensus 169 ATG~~s~ 175 (641)
T 3cp8_A 169 ACGTFLN 175 (641)
T ss_dssp CCTTCBT
T ss_pred CcCCCCC
Confidence 9997654
No 301
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.53 E-value=5.1e-05 Score=74.51 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=65.1
Q ss_pred cEEEECCChHHHHHHHHHHH-HHHHHHHhhhcCCCCccEEEEEeCCCCC---------Cc--ccHHHHHHHHHHHHhcCC
Q 013810 232 HCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS--FDDRLRHYATTQLSKSGV 299 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~~--~~~~~~~~~~~~l~~~gV 299 (436)
+|+|||+|+.|+.+|..|.+ ... ....+.+|+|+++.+.. +. ...++...+.+.+++.+|
T Consensus 5 ~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v 76 (456)
T 1lqt_A 5 YIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRF 76 (456)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTE
T ss_pred EEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 89999999999999999987 520 00013899999986322 11 223566677778888899
Q ss_pred EEEecceEEEeCCeEEEcCCcEEecceEEEecCCCC
Q 013810 300 RLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 300 ~i~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+++.+. .+ +..|.++++ ++.+|.||+|+|..+
T Consensus 77 ~~~~~v--~v-~~~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 77 RFFGNV--VV-GEHVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp EEEESC--CB-TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred EEEeeE--EE-CCEEEECCC-eEeCCEEEEeeCCCC
Confidence 999873 12 234555555 478999999999973
No 302
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.53 E-value=3.6e-05 Score=78.11 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=32.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+||||||||+|||+||+.|++.|.+|+||||.+.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 46999999999999999999999999999999754
No 303
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.52 E-value=0.00054 Score=69.34 Aligned_cols=90 Identities=21% Similarity=0.336 Sum_probs=67.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 280 (436)
+|+|||||++|+-+|..|++.+ .+|+|+++.+...
T Consensus 25 DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~ 90 (591)
T 3i3l_A 25 KVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVK 90 (591)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEE
T ss_pred CEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcc
Confidence 7999999999999999999865 7788887642100
Q ss_pred ---------------------------------cc-cHHHHHHHHHHHHhcCCEEEec-ceEEEeCC-----eEEEc-CC
Q 013810 281 ---------------------------------SF-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN-DG 319 (436)
Q Consensus 281 ---------------------------------~~-~~~~~~~~~~~l~~~gV~i~~~-~v~~i~~~-----~v~~~-~g 319 (436)
.+ ...+.+.+.+.+++.||+++.+ +|+++..+ .|.+. +|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G 170 (591)
T 3i3l_A 91 KPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGG 170 (591)
T ss_dssp ECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETT
T ss_pred cCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCC
Confidence 00 1234556677777889999998 58888632 36666 66
Q ss_pred --cEEecceEEEecCCCC
Q 013810 320 --TEVPYGLLVWSTGVGP 335 (436)
Q Consensus 320 --~~i~~D~vi~a~G~~p 335 (436)
.++.+|+||.|+|...
T Consensus 171 ~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 171 ESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEEEESEEEECCGGGC
T ss_pred ceEEEEcCEEEECCCCcc
Confidence 5799999999999865
No 304
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.52 E-value=3.8e-05 Score=78.16 Aligned_cols=35 Identities=29% Similarity=0.443 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+||||||||+|||+||+.|++.|.+|+|||+...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999998753
No 305
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.51 E-value=4.9e-05 Score=76.89 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=32.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 47999999999999999999999999999999753
No 306
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.50 E-value=4.9e-05 Score=74.44 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhcCCEEEecc-eEEEeC---C---eEEEcCCcEEecceEEEecCCC
Q 013810 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLILNDGTEVPYGLLVWSTGVG 334 (436)
Q Consensus 284 ~~~~~~~~~~l~~~gV~i~~~~-v~~i~~---~---~v~~~~g~~i~~D~vi~a~G~~ 334 (436)
.++.+.+.+.+++.|++++.++ |++|.. + +|++.+|+++.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4677888889999999999995 888753 2 4778889899999999999988
No 307
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.49 E-value=0.00041 Score=70.19 Aligned_cols=50 Identities=12% Similarity=0.019 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhcCCEEEecc-eEEEe--C-Ce---EEEc--CCc--EEecceEEEecCCCC
Q 013810 286 LRHYATTQLSKSGVRLVRGI-VKDVD--S-QK---LILN--DGT--EVPYGLLVWSTGVGP 335 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~~-v~~i~--~-~~---v~~~--~g~--~i~~D~vi~a~G~~p 335 (436)
+.+.+.+.+++.||+++.++ ++++. + +. |++. +|+ ++.+|.||+|+|...
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 34455666777899999985 77774 2 32 5554 675 689999999999754
No 308
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.49 E-value=4.5e-05 Score=78.51 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhccc-----CCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-----SLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-----~g~~v~lie~~~~ 96 (436)
+++|+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4789999999999999999999 9999999998754
No 309
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.48 E-value=5.2e-05 Score=77.70 Aligned_cols=34 Identities=12% Similarity=0.181 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhcccC------CCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~------g~~v~lie~~~ 95 (436)
.+||||||||+|||+||+.|++. |.+|+||||..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 47999999999999999999997 99999999864
No 310
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.48 E-value=0.00033 Score=67.35 Aligned_cols=58 Identities=12% Similarity=0.156 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC--C---eEEEcCCcEEecceEEEecCCCCchhcccCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~---~v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (436)
.+.+.+.+.+++.|++++.++ |+++.. + .|.+.+| ++.+|.||+|+|.....+.+.++
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcC
Confidence 344456666777899999974 888752 2 3566677 79999999999987654444443
No 311
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.46 E-value=0.00049 Score=65.36 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhcCCEEEec-ceEEEeC--C--eEEEcCCcEEecceEEEecCCCCchhcc
Q 013810 286 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVK 340 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~-~v~~i~~--~--~v~~~~g~~i~~D~vi~a~G~~p~~~~~ 340 (436)
+.+.+.+.+++.|++++.+ +|++++. + .|.+.+| ++.+|.||+|+|.....++.
T Consensus 151 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 151 AIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhcc
Confidence 3344556667789999988 4888753 3 2455566 49999999999976554443
No 312
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.46 E-value=6.4e-05 Score=78.40 Aligned_cols=38 Identities=16% Similarity=0.313 Sum_probs=34.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
..++|+|||||++|++||..|++.|++|+|+|+.+..+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~g 372 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG 372 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccccee
Confidence 45899999999999999999999999999999976643
No 313
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.45 E-value=0.00056 Score=65.33 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 277 (436)
+|+|||+|.+|+-+|..|++.+ .+|+|+++..
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G--------------~~V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQG--------------VKTLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCC
Confidence 7999999999999999999866 8999999854
No 314
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.42 E-value=7.7e-05 Score=76.52 Aligned_cols=35 Identities=17% Similarity=0.381 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhcc---c-CCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGID---T-SLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~---~-~g~~v~lie~~~~ 96 (436)
.+||||||||+|||+||+.|+ + .|.+|+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999763
No 315
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.41 E-value=0.0012 Score=66.22 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=36.6
Q ss_pred HHHHHHHHhcCCEEEecceEEEeC--C----eEEEcCCcEEecceEEEecCCCC
Q 013810 288 HYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~v~~i~~--~----~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+.+.+.+++.||+++.++|++++. + .|.+.+|+++.+|.||.|.|...
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 344555666799999888887753 2 46778888899999999999754
No 316
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.41 E-value=8.3e-05 Score=73.42 Aligned_cols=37 Identities=27% Similarity=0.531 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCcce
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMV 98 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~~~ 98 (436)
.++|+|||||++|+++|..|++.|+ +|+|+|+.+..+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 4789999999999999999999999 899999987643
No 317
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.39 E-value=0.0006 Score=68.45 Aligned_cols=90 Identities=20% Similarity=0.222 Sum_probs=64.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------C-------------ccc------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S-------------SFD------ 283 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l---------~-------------~~~------ 283 (436)
+|+|||+|++|+.+|..|++.+ .+|+++++.+.+ + .+.
T Consensus 18 dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~ 83 (542)
T 1w4x_A 18 DVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQE 83 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHH
T ss_pred CEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhc
Confidence 7999999999999999999765 899999984311 1 011
Q ss_pred ----------HHHHHHHHHHHHhcC--CEEEecc-eEEEe--CC----eEEEcCCcEEecceEEEecCCCC
Q 013810 284 ----------DRLRHYATTQLSKSG--VRLVRGI-VKDVD--SQ----KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 284 ----------~~~~~~~~~~l~~~g--V~i~~~~-v~~i~--~~----~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+++.+++....++.+ ++++.++ |.+++ ++ .|.+.+|+++.+|.||+|+|...
T Consensus 84 ~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 84 WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp CCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred cCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 234455555555554 5677774 77764 22 46778888999999999999643
No 318
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.39 E-value=0.00048 Score=65.99 Aligned_cols=90 Identities=19% Similarity=0.282 Sum_probs=63.9
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 280 (436)
.|+|||||++|+-+|..|++.+ .+|+|+++.+...
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G--------------~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 7999999999999999999865 6666666632100
Q ss_pred -------------cc--------------cHHHHHHHHHHHHhcCCEEEecc-eEEEe--CCe---EEE---cCCcEEec
Q 013810 281 -------------SF--------------DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQK---LIL---NDGTEVPY 324 (436)
Q Consensus 281 -------------~~--------------~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~---v~~---~~g~~i~~ 324 (436)
.+ ...+.+.+.+.+++.|++++.++ |++++ ++. |.+ .++.++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 00 01244566677777899999884 77764 333 455 34568999
Q ss_pred ceEEEecCCCC
Q 013810 325 GLLVWSTGVGP 335 (436)
Q Consensus 325 D~vi~a~G~~p 335 (436)
|.||.|.|...
T Consensus 152 ~~vV~A~G~~s 162 (397)
T 3cgv_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCcch
Confidence 99999999765
No 319
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.38 E-value=0.00071 Score=68.29 Aligned_cols=90 Identities=23% Similarity=0.307 Sum_probs=67.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------- 280 (436)
.|+|||+|++|+-+|..|++.+ .+|+|+++.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 7999999999999999999866 7888888632100
Q ss_pred ------------c---------------c-cHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce--EEE--cCC-cEEec
Q 013810 281 ------------S---------------F-DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LIL--NDG-TEVPY 324 (436)
Q Consensus 281 ------------~---------------~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~--v~~--~~g-~~i~~ 324 (436)
. + ...+.+.+.+.+++.|++++.+. |++++. ++ |++ .+| +++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a 196 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRA 196 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEe
Confidence 0 0 12345666777777899999884 888754 33 445 577 68999
Q ss_pred ceEEEecCCCC
Q 013810 325 GLLVWSTGVGP 335 (436)
Q Consensus 325 D~vi~a~G~~p 335 (436)
|+||.|.|...
T Consensus 197 ~~vV~ADG~~S 207 (570)
T 3fmw_A 197 RYGVGCDGGRS 207 (570)
T ss_dssp SEEEECSCSSC
T ss_pred CEEEEcCCCCc
Confidence 99999999764
No 320
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.38 E-value=0.00039 Score=71.76 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=25.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEE
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVC 90 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~l 90 (436)
.++|+|||||+.|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 47899999999999999999998866543
No 321
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.38 E-value=0.00074 Score=65.11 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=62.4
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------ccc---------------------
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------SFD--------------------- 283 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------~~~--------------------- 283 (436)
.+|+|||||++|+-+|..|++.+ .+|+|+++.+... .+.
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~ 89 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGG 89 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcC
Confidence 37999999999999999999866 7888888743210 000
Q ss_pred -------------------------------------HHHHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCcE
Q 013810 284 -------------------------------------DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTE 321 (436)
Q Consensus 284 -------------------------------------~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~~ 321 (436)
..+.+.+.+.+.+ ++++.++ |++++. + .|++.+|++
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~ 167 (407)
T 3rp8_A 90 PLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSS 167 (407)
T ss_dssp CCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCE
T ss_pred CCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCE
Confidence 1222333444433 6777774 777653 3 356788999
Q ss_pred EecceEEEecCCCCc
Q 013810 322 VPYGLLVWSTGVGPS 336 (436)
Q Consensus 322 i~~D~vi~a~G~~p~ 336 (436)
+.+|+||.|.|....
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 999999999997643
No 322
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.37 E-value=0.00091 Score=64.23 Aligned_cols=31 Identities=32% Similarity=0.458 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||+|++|+-+|..|++.| .+|+|+++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~ 33 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERN 33 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecC
Confidence 8999999999999999999876 899999984
No 323
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.36 E-value=0.00033 Score=68.69 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=64.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC------Cc------------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------SS------------------------ 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l------~~------------------------ 281 (436)
+|+|||||++|+.+|..|++.+ .+|+|+++.+.. ..
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 7999999999999999998654 677777764210 00
Q ss_pred -----------------------c-cHHHHHHHHHHHHhcCCEEEecc-eEEEe--CCe---EEEc---CCc--EEecce
Q 013810 282 -----------------------F-DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQK---LILN---DGT--EVPYGL 326 (436)
Q Consensus 282 -----------------------~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~---v~~~---~g~--~i~~D~ 326 (436)
+ ...+.+.+.+.+.+.|++++.++ |+++. ++. |++. +|+ ++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 0 02355666777777899999984 77764 334 4454 676 799999
Q ss_pred EEEecCCCC
Q 013810 327 LVWSTGVGP 335 (436)
Q Consensus 327 vi~a~G~~p 335 (436)
||.|.|...
T Consensus 154 VV~AdG~~s 162 (453)
T 3atr_A 154 VVEATGYSR 162 (453)
T ss_dssp EEECCGGGC
T ss_pred EEECcCCch
Confidence 999999654
No 324
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.35 E-value=0.0012 Score=68.14 Aligned_cols=57 Identities=12% Similarity=0.215 Sum_probs=39.4
Q ss_pred HHHHHHhcCCEEEecc-eEEEe--CCe--EEEcCCcEEecceEEEecCCCCchhcccCCCCC
Q 013810 290 ATTQLSKSGVRLVRGI-VKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 346 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~-v~~i~--~~~--v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~l~~ 346 (436)
+.+.+++.|++++.++ |+++. +++ |.+.+|.++.+|.||+|+|.....+....++++
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lpl 484 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPV 484 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTCSC
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCCcc
Confidence 3444556799999984 88775 343 455677889999999999987654444444433
No 325
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.32 E-value=0.00016 Score=75.41 Aligned_cols=106 Identities=18% Similarity=0.178 Sum_probs=65.1
Q ss_pred CCcEEEEC--CchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-
Q 013810 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS- 138 (436)
Q Consensus 62 ~~~VvIIG--gG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (436)
.++|+||| ||+.|+.+|..|++.|.+|+||++.+ +.-..... .. ...+.+ ..+..++.++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~--------~~--~~~~~~----~l~~~GV~i~~~~ 592 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFT--------LE--YPNMMR----RLHELHVEELGDH 592 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHT--------TC--HHHHHH----HHHHTTCEEECSE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccc--------cc--HHHHHH----HHHhCCCEEEcCc
Confidence 46899999 99999999999999999999999876 21100000 00 001111 123468888776
Q ss_pred EeEeEeCCCCEEEEEEe-cCCccc-----------CCCCceeeeccEEEEeCCCCCCC
Q 013810 139 HCAGIDTDNHVVHCETV-TDELRT-----------LEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 139 ~v~~id~~~~~v~~~~~-~~g~~~-----------~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
++..++.+ .+.+... .++... ....++.+.+|.||+|+|..|..
T Consensus 593 ~v~~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 593 FCSRIEPG--RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEEEEETT--EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEEEEECC--eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 77888754 3433321 122110 01112248999999999988754
No 326
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.32 E-value=0.00077 Score=64.79 Aligned_cols=31 Identities=29% Similarity=0.593 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||+|++|+.+|..|++.+ .+|+|+++.
T Consensus 28 dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~ 58 (398)
T 2xdo_A 28 NVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERD 58 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCC
Confidence 7999999999999999999765 899999985
No 327
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.28 E-value=0.00026 Score=76.04 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=64.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcceecchhhhhhcCcccccccccchhhcchhhhcCCCcEEEEe-Ee
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (436)
.++|+|||+|+.|+.+|..|++.|.+|+||++.+.+. .. .. ..+..++.++.+ .|
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-----~~--------------~~-----~l~~~GV~v~~~~~v 339 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-----AA--------------AA-----QAVADGVQVISGSVV 339 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-----HH--------------HH-----HHHHTTCCEEETEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-----hh--------------HH-----HHHhCCeEEEeCCEe
Confidence 3689999999999999999999999999999886531 00 11 123457888776 67
Q ss_pred EeEeC--CCC--EEEEEEe-c---CCcccCCCCceeeeccEEEEeCCCCCCC
Q 013810 141 AGIDT--DNH--VVHCETV-T---DELRTLEPWKFKISYDKLVIALGAEAST 184 (436)
Q Consensus 141 ~~id~--~~~--~v~~~~~-~---~g~~~~~~~~~~~~~d~lViAtG~~~~~ 184 (436)
..+.. +++ .+.+... . +|+ +.++.+|.||+|+|..|+.
T Consensus 340 ~~i~~~~~~~v~~v~~~~~~~~~~~G~------~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 340 VDTEADENGELSAIVVAELDEARELGG------TQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EEEEECTTSCEEEEEEEEECTTCCEEE------EEEEECSEEEEECCEEECC
T ss_pred EEEeccCCCCEEEEEEEeccccCCCCc------eEEEEcCEEEECCCcCcCh
Confidence 78875 333 3444321 0 131 1279999999999987654
No 328
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.28 E-value=0.00067 Score=63.72 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=28.3
Q ss_pred cCCEEEecc-eEEEeC--C--eEEEcCCcEEecceEEEecC
Q 013810 297 SGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTG 332 (436)
Q Consensus 297 ~gV~i~~~~-v~~i~~--~--~v~~~~g~~i~~D~vi~a~G 332 (436)
.|++++.++ |.+++. + .|.+.+|+++.+|.||+|++
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSC
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCC
Confidence 489999985 888853 3 35567787789999999987
No 329
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.27 E-value=0.00013 Score=73.38 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|++|||+|+||+.+|.+|++.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999864
No 330
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.27 E-value=0.0044 Score=60.58 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|+|+|+|-.|.+.|..|.+.|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999874
No 331
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.26 E-value=0.00095 Score=66.89 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEe--CC----e--EEEcCC---cEEecceEEEecCCCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVD--SQ----K--LILNDG---TEVPYGLLVWSTGVGP 335 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~----~--v~~~~g---~~i~~D~vi~a~G~~p 335 (436)
.+.+.+.+.+++.|++++.++ +++++ ++ + +++.++ .++.+|+||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 445566777778899999984 77774 33 4 444555 6799999999999875
No 332
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.25 E-value=0.00055 Score=66.04 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhcCCEEEecc-eE---------EEeC--Ce--EEEcCCcEEecceEEEecCCCCchhcc-cCCC
Q 013810 286 LRHYATTQLSKSGVRLVRGI-VK---------DVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVK-SLDL 344 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~~-v~---------~i~~--~~--v~~~~g~~i~~D~vi~a~G~~p~~~~~-~~~l 344 (436)
+.+.+.+.+++.|++++.++ |. ++.. +. |.+.+| ++.+|.||+|+|.....+.+ .+++
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 44555666777899999884 77 6643 22 344455 79999999999987655555 4443
No 333
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.18 E-value=0.0014 Score=65.39 Aligned_cols=50 Identities=16% Similarity=0.154 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhcCCEEEecc-eEEEeC--C---eEEE--cCCc--EEecceEEEecCCCC
Q 013810 286 LRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLIL--NDGT--EVPYGLLVWSTGVGP 335 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~~-v~~i~~--~---~v~~--~~g~--~i~~D~vi~a~G~~p 335 (436)
+.+.+.+.+++.||+++.++ |+++.. + +|.+ .+|+ ++.+|+||.|+|...
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 44556667777899999984 777643 3 2444 4574 799999999999864
No 334
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.18 E-value=0.0018 Score=62.06 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCEEEecc-eEEEe--CCeE--EEcCCcEEecceEEEecCCCCchhcccCC
Q 013810 288 HYATTQLSKSGVRLVRGI-VKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~-v~~i~--~~~v--~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (436)
+.+.+.+++.|++++.++ |++++ ++++ .+.+| ++.+|.||+|+|.....+++.++
T Consensus 157 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 157 AALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcC
Confidence 344555667799999884 87774 3344 33344 79999999999987555555444
No 335
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.18 E-value=0.0021 Score=65.04 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEe--C-C---eEEEc------CC---------cEEecceEEEecCCCCc
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVD--S-Q---KLILN------DG---------TEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~--~-~---~v~~~------~g---------~~i~~D~vi~a~G~~p~ 336 (436)
.+.+.+.+.+++.||+++.+. +.++. + + +|.+. +| .++.+|.||.|.|....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 455667777888899999994 87774 2 2 25554 33 67999999999998653
No 336
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.16 E-value=0.00014 Score=74.46 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=33.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCC--------CeEEEEcCCC-cc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL--------YDVVCVSPRN-HM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g--------~~v~lie~~~-~~ 97 (436)
.++|+|||||+|||+||..|++.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 9999999988 65
No 337
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.16 E-value=0.0018 Score=65.46 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhcCCEEEecc-eEEEe--C-C---eEEEc--CCc--EEecceEEEecCCCCc
Q 013810 286 LRHYATTQLSKSGVRLVRGI-VKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~~-v~~i~--~-~---~v~~~--~g~--~i~~D~vi~a~G~~p~ 336 (436)
+.+.+.+.+++.||+++.++ +.++. + + +|++. +|+ ++.+|.||+|+|-.+.
T Consensus 257 l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 257 VAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 34455666778899999985 77773 2 2 35554 664 5899999999997653
No 338
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.16 E-value=0.0024 Score=66.05 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=38.5
Q ss_pred HHHHHHhcCCEEEecc-eEEEeC--C--eEEEcCCc-EEecceEEEecCCCCchhcccCCCCC
Q 013810 290 ATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGT-EVPYGLLVWSTGVGPSTLVKSLDLPK 346 (436)
Q Consensus 290 ~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~~g~-~i~~D~vi~a~G~~p~~~~~~~~l~~ 346 (436)
+.+.+++.|++++.++ |+++.. + .|.+.+|+ ++.+|.||+|+|.....+....++++
T Consensus 418 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl 480 (689)
T 3pvc_A 418 LMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPL 480 (689)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSCC
T ss_pred HHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCCcc
Confidence 3344556789999884 888753 3 35566776 89999999999987655544444443
No 339
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.14 E-value=0.0032 Score=62.44 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=64.6
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-------------------------------
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------------------------- 279 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l------------------------------- 279 (436)
.+|+|||+|++|+-+|..|++.| .+|+++++.+..
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 78 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGG--------------VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVET 78 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccc
Confidence 37999999999999999999865 556666552100
Q ss_pred --------------------C---cc-cHHHHHHHHHHHHhcCCEEEecc-eEEEeC--Ce--EEEcCCc---EEecceE
Q 013810 280 --------------------S---SF-DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILNDGT---EVPYGLL 327 (436)
Q Consensus 280 --------------------~---~~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~~--~~--v~~~~g~---~i~~D~v 327 (436)
+ .+ ...+.+.+.+.+.+.|++++.++ +.+++. ++ |++.+++ ++.+|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 158 (499)
T 2qa2_A 79 STQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYV 158 (499)
T ss_dssp ESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEE
T ss_pred cccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEE
Confidence 0 00 13455566677777899999984 887753 33 4556664 7999999
Q ss_pred EEecCCCC
Q 013810 328 VWSTGVGP 335 (436)
Q Consensus 328 i~a~G~~p 335 (436)
|.|.|...
T Consensus 159 VgADG~~S 166 (499)
T 2qa2_A 159 VGCDGGRS 166 (499)
T ss_dssp EECCCTTC
T ss_pred EEccCccc
Confidence 99999764
No 340
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.08 E-value=0.0018 Score=68.45 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=38.8
Q ss_pred HHHHHHHHhcCCEEEecc-eEEEeC--Ce---EEEcCCcEEecceEEEecCCCCchhcccCC
Q 013810 288 HYATTQLSKSGVRLVRGI-VKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~-v~~i~~--~~---v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (436)
..+.+.+++.|++++.++ |++++. ++ |.+.+| ++.+|.||+|+|.....+.+.++
T Consensus 155 ~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g 215 (830)
T 1pj5_A 155 QLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIG 215 (830)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhC
Confidence 445556667899999884 887753 33 455666 79999999999987655544444
No 341
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.06 E-value=0.0036 Score=62.10 Aligned_cols=91 Identities=20% Similarity=0.231 Sum_probs=64.2
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------------------------------
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 280 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~------------------------------ 280 (436)
.+|+|||+|++|+-+|..|++.+ .+|+++++.+...
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~ 77 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAG--------------VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVET 77 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCB
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccc
Confidence 37999999999999999999865 5666666521000
Q ss_pred ------------------c------c-cHHHHHHHHHHHHhcCCEEEecc-eEEEe--CCe--EEEcCCc---EEecceE
Q 013810 281 ------------------S------F-DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQK--LILNDGT---EVPYGLL 327 (436)
Q Consensus 281 ------------------~------~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~--v~~~~g~---~i~~D~v 327 (436)
. + ...+.+.+.+.+++.|++++.++ +++++ +++ +++.+++ ++.+|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~v 157 (500)
T 2qa1_A 78 STQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYL 157 (500)
T ss_dssp CCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEE
T ss_pred cccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEE
Confidence 0 0 12345566677777899999984 87775 344 4455654 7999999
Q ss_pred EEecCCCC
Q 013810 328 VWSTGVGP 335 (436)
Q Consensus 328 i~a~G~~p 335 (436)
|.|.|...
T Consensus 158 VgADG~~S 165 (500)
T 2qa1_A 158 VGCDGGRS 165 (500)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999764
No 342
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.04 E-value=0.00033 Score=70.05 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~~~~ 96 (436)
.+|+||||||+||+.+|.+|++ .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999998 7899999998754
No 343
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.04 E-value=0.0029 Score=61.00 Aligned_cols=91 Identities=21% Similarity=0.330 Sum_probs=62.3
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCCCc------cc---------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSS------FD--------------------- 283 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~l~~------~~--------------------- 283 (436)
+|+|||+|++|+-+|..|++.+ .+ |+|+++.+.... +.
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 7999999999999999999866 67 888887432100 00
Q ss_pred -----------------------------------HHHHHHHHHHHHh-cC-CEEEecc-eEEEe-CCe--EEEcC---C
Q 013810 284 -----------------------------------DRLRHYATTQLSK-SG-VRLVRGI-VKDVD-SQK--LILND---G 319 (436)
Q Consensus 284 -----------------------------------~~~~~~~~~~l~~-~g-V~i~~~~-v~~i~-~~~--v~~~~---g 319 (436)
..+.+.+.+.+.+ .| ++++.++ |++++ +++ |.+.+ |
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 1334455555655 35 5888884 66664 232 45554 7
Q ss_pred --cEEecceEEEecCCCCc
Q 013810 320 --TEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 320 --~~i~~D~vi~a~G~~p~ 336 (436)
+++.+|+||.|.|....
T Consensus 152 ~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 152 KPQALGADVLVGADGIHSA 170 (410)
T ss_dssp CEEEEEESEEEECCCTTCH
T ss_pred CceEEecCEEEECCCccch
Confidence 57999999999998653
No 344
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.00 E-value=0.00086 Score=64.06 Aligned_cols=31 Identities=29% Similarity=0.702 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHHHH--HHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~--~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||||+.|+.+|..|++. + .+|+++++.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G--------------~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPL--------------WAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT--------------SEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCC--------------CCEEEEECC
Confidence 699999999999999999986 5 788888874
No 345
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.96 E-value=0.00037 Score=69.86 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+|+||||||+||+.+|.+|++ |.+|+|+|+.+.
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 4899999999999999999999 999999999865
No 346
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.92 E-value=0.0013 Score=62.46 Aligned_cols=55 Identities=7% Similarity=0.048 Sum_probs=37.8
Q ss_pred HHHHHHHHhcCCEEEecc-eEEEe--CCe--EEEcCCcEEecceEEEecCCCCchhcccCC
Q 013810 288 HYATTQLSKSGVRLVRGI-VKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~-v~~i~--~~~--v~~~~g~~i~~D~vi~a~G~~p~~~~~~~~ 343 (436)
..+.+.+++.|++++.++ |+++. +++ |++.+| ++.+|.||+|+|.....+...++
T Consensus 158 ~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 217 (381)
T 3nyc_A 158 QGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAG 217 (381)
T ss_dssp HHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhC
Confidence 345556667799999874 77764 333 445555 79999999999986655544444
No 347
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.91 E-value=0.00052 Score=69.16 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~~ 96 (436)
.+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 489999999999999999999987 79999999865
No 348
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.90 E-value=0.0073 Score=60.63 Aligned_cols=50 Identities=20% Similarity=0.254 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhc-CCEEEecceEEEeC--C----eEEEcCCcEEecceEEEecCCCC
Q 013810 286 LRHYATTQLSKS-GVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 286 ~~~~~~~~l~~~-gV~i~~~~v~~i~~--~----~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+.+.+.+.+++. ||+++.++|++++. + .|.+.+|+++.+|.||.|+|...
T Consensus 196 l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 196 VADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 445566667777 99999888887752 2 36678888899999999999754
No 349
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.87 E-value=0.0006 Score=67.85 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=33.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|++|||+|++|+.+|..|++.|.+|+|||+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999999864
No 350
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.86 E-value=0.0047 Score=59.98 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhcCCEEEec----ceEEEe--CCe---EEEcCCcEEecceEEEecCCCCchhc
Q 013810 285 RLRHYATTQLSKSGVRLVRG----IVKDVD--SQK---LILNDGTEVPYGLLVWSTGVGPSTLV 339 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~----~v~~i~--~~~---v~~~~g~~i~~D~vi~a~G~~p~~~~ 339 (436)
.+.+.+.+.+++.|++++.+ +|+++. +++ |++.+|+++.+|.||+|+|.....++
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhc
Confidence 34455666677789999987 487774 333 67788888999999999998665443
No 351
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.85 E-value=0.0081 Score=59.96 Aligned_cols=48 Identities=25% Similarity=0.334 Sum_probs=36.2
Q ss_pred HHHHHHHHh-cCCEEEecceEEEeC--C----eEEEcCCcEEecceEEEecCCCC
Q 013810 288 HYATTQLSK-SGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 288 ~~~~~~l~~-~gV~i~~~~v~~i~~--~----~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+.+.+.+++ .||+++.++|++++. + .|.+.+|+++.+|.||.|.|...
T Consensus 179 ~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 444555666 799999888888752 2 45667877899999999999854
No 352
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.85 E-value=0.0054 Score=58.34 Aligned_cols=90 Identities=20% Similarity=0.317 Sum_probs=60.8
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC------c-----------------------
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------S----------------------- 281 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~l~------~----------------------- 281 (436)
.|+|||||++|+-+|..|++.| .+|+|+++.+ +.. .
T Consensus 6 DViIVGaGpaGl~~A~~La~~G--------------~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 5999999999999999999876 7777777632 100 0
Q ss_pred ---------------------------c-cHHHHHHHHHHHHhcCCEEEecc-eEEEe--CCeEE---E-cCC--cEEec
Q 013810 282 ---------------------------F-DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQKLI---L-NDG--TEVPY 324 (436)
Q Consensus 282 ---------------------------~-~~~~~~~~~~~l~~~gV~i~~~~-v~~i~--~~~v~---~-~~g--~~i~~ 324 (436)
+ ...+.+.+.+...+.|++++.+. +.++. ++.+. . .++ .++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 0 12344556666777899999884 65543 33322 1 233 35899
Q ss_pred ceEEEecCCCC
Q 013810 325 GLLVWSTGVGP 335 (436)
Q Consensus 325 D~vi~a~G~~p 335 (436)
|+||-|.|...
T Consensus 152 ~~vIgAdG~~S 162 (397)
T 3oz2_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred eEEEeCCcccc
Confidence 99999999754
No 353
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.78 E-value=0.0011 Score=65.76 Aligned_cols=89 Identities=22% Similarity=0.347 Sum_probs=60.2
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-----------cc---cHHHHHHHHHHHHhc
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-----------SF---DDRLRHYATTQLSKS 297 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~-----------~~---~~~~~~~~~~~l~~~ 297 (436)
+|+|||+|+.|+.+|..|++ . .+|+|+++.+.+. .+ ..++...+.+.+ +.
T Consensus 110 dVvIIGgG~aGl~aA~~L~~--------------~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~ 173 (493)
T 1y56_A 110 DVAIIGGGPAGIGAALELQQ--------------Y-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NE 173 (493)
T ss_dssp SCCEECCSHHHHHHHHHHTT--------------T-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CT
T ss_pred CEEEECccHHHHHHHHHHHh--------------c-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hc
Confidence 79999999999999999974 2 6899999864221 11 122223333334 56
Q ss_pred CCEEEecc-eEEEeC--CeEEE---cCCc--EEecceEEEecCCCCc
Q 013810 298 GVRLVRGI-VKDVDS--QKLIL---NDGT--EVPYGLLVWSTGVGPS 336 (436)
Q Consensus 298 gV~i~~~~-v~~i~~--~~v~~---~~g~--~i~~D~vi~a~G~~p~ 336 (436)
+|+++.+. +.+++. ..+.+ .+++ ++.+|.+|+|+|..|.
T Consensus 174 ~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 174 NTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp TEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred CCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 89988774 665543 22322 4454 6899999999998775
No 354
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.78 E-value=0.0086 Score=59.46 Aligned_cols=51 Identities=24% Similarity=0.240 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCEEEecceEEEeC--C----eEEEcCCcEEecceEEEecCCCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~v~~i~~--~----~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
.+.+.+.+.+++.||+++.++|++++. + .|++.+|+++.+|.||.|.|...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 344455666667899999888777753 2 36677888899999999999754
No 355
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.70 E-value=0.00073 Score=67.17 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=33.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCcce
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~ 98 (436)
.+|++|||+|++|+.+|..|++.|.+|+|||+.....
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987543
No 356
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.65 E-value=0.001 Score=67.07 Aligned_cols=34 Identities=12% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~~~ 95 (436)
.+|+||||||.||+.+|.+|++ .+.+|+|||+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4899999999999999999997 589999999986
No 357
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.65 E-value=0.0084 Score=59.43 Aligned_cols=55 Identities=13% Similarity=0.050 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCEEEecc-eEEEeC--C--eEEEc---CCc--EEecceEEEecCCCCchhcc
Q 013810 286 LRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILN---DGT--EVPYGLLVWSTGVGPSTLVK 340 (436)
Q Consensus 286 ~~~~~~~~l~~~gV~i~~~~-v~~i~~--~--~v~~~---~g~--~i~~D~vi~a~G~~p~~~~~ 340 (436)
+...+.+.+.+.|++++.++ |+++.. + +|.+. +|+ ++.+|.||.|+|.....+..
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 34455666677899999874 777743 2 35553 565 79999999999987665544
No 358
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.61 E-value=0.00081 Score=67.59 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=32.7
Q ss_pred CCcEEEECCchHHHHHHHhccc-CCCeEEEEcCCCcc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~~~~~ 97 (436)
.+|+||||||.||+.+|.+|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999998 78999999998653
No 359
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.52 E-value=0.012 Score=58.57 Aligned_cols=51 Identities=22% Similarity=0.169 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCEEEecc-eEEEeC---C---eEEEc-CCc--EEecc-eEEEecCCCC
Q 013810 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLILN-DGT--EVPYG-LLVWSTGVGP 335 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV~i~~~~-v~~i~~---~---~v~~~-~g~--~i~~D-~vi~a~G~~p 335 (436)
.+.+.+.+.+++.||+++.++ ++++.. + +|++. +++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 344556666777899999984 777642 2 35554 343 58996 9999999655
No 360
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.51 E-value=0.002 Score=65.25 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=33.5
Q ss_pred CCCcEEEECCchHHHHHHHhccc-CCCeEEEEcCCCcc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~-~g~~v~lie~~~~~ 97 (436)
..+|++|||+|+||+.+|..|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 35899999999999999999999 89999999998653
No 361
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.49 E-value=0.0017 Score=65.24 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=32.4
Q ss_pred CCcEEEECCchHHHHHHHhcccC-CCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~-g~~v~lie~~~~ 96 (436)
.+|++|||+|++|+.+|.+|++. +.+|+|||+...
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPD 48 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCc
Confidence 48999999999999999999997 899999999854
No 362
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.39 E-value=0.011 Score=57.98 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCCEEEecc-eEEEe--CCeE---EEc-CCcEEecceEEEecCCCCc
Q 013810 288 HYATTQLSKSGVRLVRGI-VKDVD--SQKL---ILN-DGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~-v~~i~--~~~v---~~~-~g~~i~~D~vi~a~G~~p~ 336 (436)
+.+.+.+++.||+++.++ + ++. ++.+ .+. ++.++.+|.||+|+|..+.
T Consensus 123 ~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 123 NFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 444555566799999886 8 773 3433 443 3335789999999998775
No 363
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.36 E-value=0.0035 Score=50.43 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+.+|+|+|+|.-|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34689999999999999999999999999999874
No 364
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.32 E-value=0.0092 Score=60.01 Aligned_cols=57 Identities=12% Similarity=0.016 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCEEEecc-eEEEe--CC---eEEEcC---C--cEEecceEEEecCCCCchhcccCCC
Q 013810 288 HYATTQLSKSGVRLVRGI-VKDVD--SQ---KLILND---G--TEVPYGLLVWSTGVGPSTLVKSLDL 344 (436)
Q Consensus 288 ~~~~~~l~~~gV~i~~~~-v~~i~--~~---~v~~~~---g--~~i~~D~vi~a~G~~p~~~~~~~~l 344 (436)
..+.+.+.+.|++++.+. |+++. ++ +|++.+ | .++.+|.||.|+|.....+.+..+.
T Consensus 174 ~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~ 241 (561)
T 3da1_A 174 LEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRS 241 (561)
T ss_dssp HHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCC
Confidence 344455667899999884 77764 33 355543 3 4689999999999876555555544
No 365
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.23 E-value=0.0034 Score=50.51 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|+|+|+|.-|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999863
No 366
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.18 E-value=0.0044 Score=50.84 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 367
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.14 E-value=0.012 Score=60.28 Aligned_cols=51 Identities=20% Similarity=0.181 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhcCC--EEEecc-eEEEeCC------e--EEEc------CC--cEEecceEEEecCCCC
Q 013810 285 RLRHYATTQLSKSGV--RLVRGI-VKDVDSQ------K--LILN------DG--TEVPYGLLVWSTGVGP 335 (436)
Q Consensus 285 ~~~~~~~~~l~~~gV--~i~~~~-v~~i~~~------~--v~~~------~g--~~i~~D~vi~a~G~~p 335 (436)
.+.+.+.+.+++.|+ +++.++ +++++.+ . |++. +| +++.+|+||.|.|...
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 455667777888876 888884 7777521 2 3343 46 4699999999999765
No 368
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.09 E-value=0.0048 Score=50.41 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
+.+|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999986
No 369
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.05 E-value=0.0049 Score=49.21 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999863
No 370
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.91 E-value=0.0055 Score=47.23 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~ 95 (436)
+++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 368999999999999999999999 8999999863
No 371
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.76 E-value=0.0085 Score=52.15 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=31.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
..++|+|||||..|...|..|.+.|.+|+||+++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999985
No 372
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.73 E-value=0.0076 Score=58.86 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=32.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..++|+|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45799999999999999999999999999999864
No 373
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=95.69 E-value=0.052 Score=54.33 Aligned_cols=22 Identities=27% Similarity=0.674 Sum_probs=20.3
Q ss_pred cEEEECCChHHHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFI 253 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~ 253 (436)
+|+|||+|++|+-+|..|++.+
T Consensus 28 dVlIVGaGpaGl~~A~~La~~G 49 (549)
T 2r0c_A 28 DVLILGGGPVGMALALDLAHRQ 49 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEECcCHHHHHHHHHHHHCC
Confidence 7999999999999999999854
No 374
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.55 E-value=0.011 Score=55.09 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
++++|+|||+|..|.+.|..|++.|+ +|+|+|.++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999999999999999999888 9999998753
No 375
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.54 E-value=0.0086 Score=53.36 Aligned_cols=38 Identities=5% Similarity=-0.053 Sum_probs=31.8
Q ss_pred CCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcCC
Q 013810 361 PSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLARN 408 (436)
Q Consensus 361 t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 408 (436)
++.++||++||++.. ..+..|+.+|+.||+.|....+.
T Consensus 292 ~~~~~v~l~GDa~~g----------~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 292 DADLGIYVCGDWCLS----------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp ETTTTEEECCGGGTT----------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCEEEEecccCC----------cCHHHHHHHHHHHHHHHHHHhhc
Confidence 567899999999864 35888999999999999876654
No 376
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.52 E-value=0.0083 Score=48.04 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
+++|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999986
No 377
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.31 E-value=0.0084 Score=53.95 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..++|+|||||..|...|..|.+.|.+|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34789999999999999999999999999999753
No 378
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.31 E-value=0.015 Score=50.68 Aligned_cols=74 Identities=16% Similarity=0.130 Sum_probs=50.4
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEE
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 309 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i 309 (436)
+++|+|||||.+|...+..|.+.+ .+|+++.+. ..+++ .+...+.+|+++.....
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~-----~~~~l----~~l~~~~~i~~i~~~~~-- 85 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT-----VSAEI----NEWEAKGQLRVKRKKVG-- 85 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS-----CCHHH----HHHHHTTSCEEECSCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC-----CCHHH----HHHHHcCCcEEEECCCC--
Confidence 358999999999999999998766 899999763 23343 33344556776643211
Q ss_pred eCCeEEEcCCcEEecceEEEecCCCCc
Q 013810 310 DSQKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 310 ~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
++.--.+|+||.|||....
T Consensus 86 --------~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 86 --------EEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp --------GGGSSSCSEEEECCCCTHH
T ss_pred --------HhHhCCCCEEEECCCCHHH
Confidence 1111248999999997654
No 379
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.19 E-value=0.011 Score=57.49 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|+|||.|.+|+++|..|.++|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 36899999999999999999999999999997654
No 380
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.15 E-value=0.015 Score=58.84 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=35.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCccee
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~~~~ 99 (436)
+++||+|||+|..|...|..|++.|.+|++||++++.+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 369999999999999999999999999999999988644
No 381
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.05 E-value=0.052 Score=53.70 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=19.8
Q ss_pred cEEEECCChHHHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSDFI 253 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~ 253 (436)
.|+|||+|++|+-+|..|.+.+
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 5999999999999999998765
No 382
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.00 E-value=0.019 Score=48.40 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccC-CCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~-g~~v~lie~~~ 95 (436)
..+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46899999999999999999998 99999999874
No 383
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=94.83 E-value=0.099 Score=53.60 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=19.2
Q ss_pred cEEEECCChHHHHHHHHHHH
Q 013810 232 HCVVVGGGPTGVEFSGELSD 251 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~ 251 (436)
.|+|||+|++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 69999999999999999998
No 384
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.75 E-value=0.027 Score=51.73 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999998743
No 385
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.70 E-value=0.02 Score=49.82 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=30.6
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999864
No 386
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.66 E-value=0.027 Score=53.52 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=32.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 387
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.53 E-value=0.032 Score=50.71 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 388
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.52 E-value=0.032 Score=44.87 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|+|||+|..|...|..|.+.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 389
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.31 E-value=0.029 Score=52.79 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47899999999999999999999999999998753
No 390
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.29 E-value=0.047 Score=55.31 Aligned_cols=57 Identities=19% Similarity=0.114 Sum_probs=39.5
Q ss_pred CCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 349 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 349 ~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
-|.|.||.+.| +++|++||+|+|++...+.....-......++-.|++|++++....
T Consensus 359 ~GGi~vd~~~~-~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 359 MGGIETDQNCE-TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp CCEEECCTTSB-CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCc-cccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 46799999999 7999999999998421111111112234567777999999887653
No 391
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.23 E-value=0.035 Score=52.33 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=32.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+++|+|||||..|..+|+.+++.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 47899999999999999999999999999997654
No 392
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.22 E-value=0.027 Score=51.85 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|.|||+|.-|...|..++..|++|+|+|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36899999999999999999999999999998754
No 393
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.08 E-value=0.039 Score=51.07 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=31.0
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|||+|.-|.+.|..|++.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 394
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.06 E-value=0.027 Score=55.63 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 277 (436)
|+|+|||+|..|+-+|..|++.| .+|+++++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G--------------~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAG--------------IPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--------------CCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CcEEEEccCC
Confidence 38999999999999999999876 8999999854
No 395
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.97 E-value=0.043 Score=50.98 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=31.1
Q ss_pred CCcEEEECCchHHHH-HHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCR-LMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~-aA~~L~~~g~~v~lie~~~~ 96 (436)
+++|.|||.|.+|++ +|..|.++|++|++.|.+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 478999999999997 78899999999999998643
No 396
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.93 E-value=0.15 Score=47.22 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=52.4
Q ss_pred CcEEEECCChHHHH-HHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecc-eEE
Q 013810 231 LHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKD 308 (436)
Q Consensus 231 ~~vvViG~G~~g~e-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~-v~~ 308 (436)
++|.|||.|-+|+. +|..|.+.| .+|++.+..... . ..+.|++.||+++.+. ...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~~-----~----~~~~L~~~gi~v~~g~~~~~ 61 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMYP-----P----MSTQLEALGIDVYEGFDAAQ 61 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCCT-----T----HHHHHHHTTCEEEESCCGGG
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCCc-----H----HHHHHHhCCCEEECCCCHHH
Confidence 48999999999997 888888776 999999985321 1 2345777899987652 110
Q ss_pred EeCCeEEEcCCcEEecceEEEecCCCCc
Q 013810 309 VDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (436)
Q Consensus 309 i~~~~v~~~~g~~i~~D~vi~a~G~~p~ 336 (436)
+ .+ ..+|+||+++|..++
T Consensus 62 l-------~~---~~~d~vV~Spgi~~~ 79 (326)
T 3eag_A 62 L-------DE---FKADVYVIGNVAKRG 79 (326)
T ss_dssp G-------GS---CCCSEEEECTTCCTT
T ss_pred c-------CC---CCCCEEEECCCcCCC
Confidence 0 00 148999999999886
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.83 E-value=0.04 Score=51.77 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=30.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~ 94 (436)
..+|||+|||.||+.+|..|...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4789999999999999999999999 89999987
No 398
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.83 E-value=0.045 Score=50.32 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=30.8
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999864
No 399
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.81 E-value=0.042 Score=50.76 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|.|||+|.-|.+.|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 400
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.68 E-value=0.057 Score=49.72 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+++|.|||.|.-|...|..|++.|++|+++|+++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 347899999999999999999999999999998753
No 401
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.66 E-value=0.052 Score=51.88 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+|+|||+|.+|+.+|..++..|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998743
No 402
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.65 E-value=0.06 Score=49.59 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~ 94 (436)
..++|.|||+|..|.+.|..|+..|+ +|+|+|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35789999999999999999999999 99999986
No 403
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.60 E-value=0.051 Score=50.62 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
.++|.|||+|.-|.+.|..|++.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 404
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.58 E-value=0.053 Score=50.88 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=31.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 405
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.55 E-value=0.061 Score=50.56 Aligned_cols=36 Identities=22% Similarity=0.125 Sum_probs=32.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+++|.|||+|.-|.+.|..|++.|++|+++++++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999998643
No 406
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.54 E-value=0.055 Score=49.96 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=30.7
Q ss_pred CcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
++|+|||+|..|...|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999999998 999999864
No 407
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.48 E-value=0.045 Score=50.44 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=30.2
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|||+|.-|.+.|..|++.|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999863
No 408
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.44 E-value=0.064 Score=51.01 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=32.3
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
...+|+|||+|.+|+.+|..++..|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998743
No 409
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.43 E-value=0.064 Score=51.65 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+.+|.|||.|+.||..|..+++.|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45789999999999999999999999999999653
No 410
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.43 E-value=0.058 Score=52.45 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 411
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.41 E-value=0.14 Score=49.67 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=32.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 347899999999999999999999999999998754
No 412
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.41 E-value=0.053 Score=50.88 Aligned_cols=34 Identities=35% Similarity=0.377 Sum_probs=31.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~ 94 (436)
...+|||+|+|.||..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34799999999999999999999998 79999987
No 413
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.40 E-value=0.095 Score=51.02 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=58.5
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEE
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 309 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i 309 (436)
+++|+|||.|.+|+-+|..|.+.| .+|+..+..... .+ ...+.|++.||+++.+.-.+
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~--~~-----~~~~~L~~~gi~~~~g~~~~- 66 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFD--EN-----PTAQSLLEEGIKVVCGSHPL- 66 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGG--GC-----HHHHHHHHTTCEEEESCCCG-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCccc--CC-----hHHHHHHhCCCEEEECCChH-
Confidence 358999999999999999998876 999999985321 01 12346777899998763100
Q ss_pred eCCeEEEcCCcEEe-cceEEEecCCCCc-hh---cccCCCC
Q 013810 310 DSQKLILNDGTEVP-YGLLVWSTGVGPS-TL---VKSLDLP 345 (436)
Q Consensus 310 ~~~~v~~~~g~~i~-~D~vi~a~G~~p~-~~---~~~~~l~ 345 (436)
. ..-. +|+||+++|..++ +. +++.|++
T Consensus 67 ---~------~~~~~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 67 ---E------LLDEDFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp ---G------GGGSCEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred ---H------hhcCCCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 0 0012 7999999999886 43 3445554
No 414
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.38 E-value=0.055 Score=48.08 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~ 95 (436)
..+|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999999997 799999874
No 415
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.32 E-value=0.066 Score=49.44 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
.++|+|||+|..|.+.|..|++.|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3689999999999999999999998 9999998753
No 416
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.23 E-value=0.078 Score=49.03 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
.++|+|||+|..|...|..|+..|+ +|+|+|.+..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3689999999999999999999888 9999997643
No 417
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.22 E-value=0.057 Score=52.64 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=31.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|+|||||..|...|..|.+.|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4789999999999999999999999999999863
No 418
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.20 E-value=0.078 Score=45.65 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 419
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.16 E-value=0.068 Score=52.49 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=30.6
Q ss_pred CCcEEEECCchHHHHHHHhcccC--CCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~ 95 (436)
+++|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999997 79999999764
No 420
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.05 E-value=0.076 Score=48.08 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.5
Q ss_pred cEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 64 ~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 421
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.01 E-value=0.085 Score=48.74 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
..++|+|||+|..|.+.|..|+..++ +++|+|..+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 34689999999999999999999888 9999998754
No 422
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.89 E-value=0.077 Score=51.99 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 689999999999999999999999999999764
No 423
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.87 E-value=0.085 Score=51.50 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccC-CC-eEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTS-LY-DVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~-g~-~v~lie~~~~ 96 (436)
.++|.|||+|.-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999998754
No 424
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.86 E-value=0.081 Score=48.92 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=32.0
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
..++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34689999999999999999999999999999874
No 425
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.85 E-value=0.075 Score=50.07 Aligned_cols=33 Identities=24% Similarity=0.151 Sum_probs=31.0
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+|+|+|+|.+|+.++..|+..|.+|+++|+++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 789999999999999999999999999999864
No 426
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.83 E-value=0.091 Score=48.72 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=31.1
Q ss_pred CcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
++|+|||+|..|.+.|..|+..|+ +|+|+|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999998 9999998753
No 427
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.83 E-value=0.086 Score=48.12 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=32.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+++|.|||.|.-|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 428
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.81 E-value=0.12 Score=51.57 Aligned_cols=56 Identities=13% Similarity=0.015 Sum_probs=38.4
Q ss_pred CCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhh
Q 013810 349 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLL 405 (436)
Q Consensus 349 ~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 405 (436)
-|.|.||.+.| |++|++||+|+|+....+...+.-......|+--|+.|++++...
T Consensus 354 ~GGi~vd~~~~-t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 354 CGGVMVDDHGR-TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp SCEEECCTTCB-CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEECCCCC-CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 46799999999 899999999999842111111111234456777788888888654
No 429
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.71 E-value=0.097 Score=50.32 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.2
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..++|.|||.|..|+..|..|++ |++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 34689999999999999999998 999999998753
No 430
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.70 E-value=0.088 Score=46.07 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCCcEEEECC-chHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGg-G~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+.++|+|.|| |.-|...+..|.+.|++|++++++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3578999998 9999999999999999999998864
No 431
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.69 E-value=0.097 Score=47.21 Aligned_cols=34 Identities=12% Similarity=0.294 Sum_probs=31.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|+|.|+|+-|-..+..|.+.|++|+++.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999998864
No 432
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.67 E-value=0.075 Score=51.36 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||||++|+-+|..|++.| .+|+|+++.
T Consensus 24 ~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~ 54 (430)
T 3ihm_A 24 RIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDR 54 (430)
T ss_dssp EEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCC
Confidence 7999999999999999999876 999999985
No 433
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.65 E-value=0.096 Score=48.34 Aligned_cols=34 Identities=15% Similarity=0.362 Sum_probs=30.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
+++|+|||+|..|.+.|..|+..++ +++|+|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999998887 899999764
No 434
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.59 E-value=0.11 Score=47.77 Aligned_cols=35 Identities=17% Similarity=0.338 Sum_probs=31.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
..++|.|||.|.-|-+.|..|++.|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34789999999999999999999999 999999874
No 435
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.57 E-value=0.077 Score=48.88 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=30.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC-eEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~ 94 (436)
.+++|.|||.|.-|...|..|.+.|+ +|+++|++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35789999999999999999999999 99999986
No 436
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.53 E-value=0.19 Score=49.45 Aligned_cols=32 Identities=34% Similarity=0.439 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
.+|+|||+|.+|+.+|..|++.+ .+|+++++.
T Consensus 34 ~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~ 65 (498)
T 2iid_A 34 KHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEAS 65 (498)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 48999999999999999999876 899999874
No 437
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.50 E-value=0.1 Score=47.91 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=30.0
Q ss_pred CcEEEECCchHHHHHHHhcccCCC-eEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~ 95 (436)
++|+|||+|..|...|..|+..|+ +|+|+|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999886 899999764
No 438
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.50 E-value=0.094 Score=48.07 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.2
Q ss_pred CcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
++|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999864
No 439
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.49 E-value=0.099 Score=47.21 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=31.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+++|+|.|+|+-|...+..|.+.|++|+++++...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 36899999999999999999999999999988643
No 440
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.45 E-value=0.062 Score=46.71 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.1
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEE-EcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~l-ie~~~~ 96 (436)
+++|.|||+|.-|.+.|..|.+.|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 46899999999999999999999999998 887643
No 441
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.41 E-value=0.06 Score=49.15 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=30.7
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|||+|.-|.+.|..|++.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 442
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.37 E-value=0.12 Score=47.64 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~~~ 96 (436)
.++|.|||+|..|.+.|..|+..++ +++|+|..+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4689999999999999999998887 9999998753
No 443
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.36 E-value=0.1 Score=48.11 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=29.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC--eEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~ 94 (436)
++++|+|||+|..|.+.|..|...++ ++.|+|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999988774 79999975
No 444
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.34 E-value=0.093 Score=50.34 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=32.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
+.+|+|||.|..|...|..|.+.|++|++||.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46799999999999999999999999999998754
No 445
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.34 E-value=0.15 Score=52.21 Aligned_cols=57 Identities=9% Similarity=-0.053 Sum_probs=38.8
Q ss_pred CCcEEeCCCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 349 GGRIGIDEWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 349 ~G~i~vd~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
-|.|.||.+.| +++|++||+|+|+....+...+.-..+...++--|++|++++....
T Consensus 372 ~GGi~vd~~~~-v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 372 MGGIRTDYRGE-AKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp CCEEECCTTSB-CSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEECCCCc-eecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999 7999999999986421111111112334567777899888887654
No 446
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.32 E-value=0.12 Score=47.53 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.8
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|||+|.-|.+.|..|+ .|.+|+++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999874
No 447
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.31 E-value=0.13 Score=47.07 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 448
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.24 E-value=0.17 Score=47.93 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.5
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..++|+|||+|.-|...+..+++.|++|+++|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 357899999999999999999999999999998654
No 449
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.23 E-value=0.083 Score=46.29 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=29.8
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+.+|+|+|+|..|...|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999864
No 450
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.12 E-value=0.12 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999863
No 451
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.12 E-value=0.12 Score=47.86 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=30.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
.++|+|||+|..|.+.|..|+..|+ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999998887 899999853
No 452
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.07 E-value=0.14 Score=49.87 Aligned_cols=35 Identities=26% Similarity=0.214 Sum_probs=31.9
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998753
No 453
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.06 E-value=0.31 Score=44.60 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=46.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEEeC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDS 311 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~ 311 (436)
+|+|||+|.+|.-+|..|+ .+ .+|+++.|++ +-. +.+++.|+.+..........
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g--------------~~V~~~~r~~-------~~~----~~l~~~G~~~~~~~~~~~~~ 57 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LY--------------HDVTVVTRRQ-------EQA----AAIQSEGIRLYKGGEEFRAD 57 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSCH-------HHH----HHHHHHCEEEEETTEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHh-cC--------------CceEEEECCH-------HHH----HHHHhCCceEecCCCeeccc
Confidence 7999999999999999998 55 8999998852 211 23455677765332111111
Q ss_pred CeEEEcCCcEEecceEEEecCC
Q 013810 312 QKLILNDGTEVPYGLLVWSTGV 333 (436)
Q Consensus 312 ~~v~~~~g~~i~~D~vi~a~G~ 333 (436)
+.......-++|+||+|+-.
T Consensus 58 --~~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 58 --CSADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp --CEEESSCCSCCSEEEECCCG
T ss_pred --ccccccccCCCCEEEEEeCH
Confidence 11111112357888888754
No 454
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.05 E-value=0.49 Score=43.52 Aligned_cols=76 Identities=13% Similarity=0.202 Sum_probs=50.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEec---ceEE
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRG---IVKD 308 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~---~v~~ 308 (436)
+|+|||+|.+|.-+|..|++.+ .+|+++.|++ . +.+++.|+.+... ...
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~--------~-----~~i~~~Gl~~~~~~~g~~~- 55 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTG--------------HCVSVVSRSD--------Y-----ETVKAKGIRIRSATLGDYT- 55 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTT--------------CEEEEECSTT--------H-----HHHHHHCEEEEETTTCCEE-
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCCh--------H-----HHHHhCCcEEeecCCCcEE-
Confidence 8999999999999999998765 8999998852 1 3455567766541 111
Q ss_pred EeCCeEEEcCCcE-E-ecceEEEecCCCCc
Q 013810 309 VDSQKLILNDGTE-V-PYGLLVWSTGVGPS 336 (436)
Q Consensus 309 i~~~~v~~~~g~~-i-~~D~vi~a~G~~p~ 336 (436)
+..-.+ +.+-.+ . .+|+||+|+-....
T Consensus 56 ~~~~~~-~~~~~~~~~~~DlVilavK~~~~ 84 (320)
T 3i83_A 56 FRPAAV-VRSAAELETKPDCTLLCIKVVEG 84 (320)
T ss_dssp ECCSCE-ESCGGGCSSCCSEEEECCCCCTT
T ss_pred Eeeeee-ECCHHHcCCCCCEEEEecCCCCh
Confidence 111111 122222 2 68999999876654
No 455
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.02 E-value=0.41 Score=37.97 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=49.7
Q ss_pred CcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEEe
Q 013810 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 310 (436)
Q Consensus 231 ~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~ 310 (436)
.+++|+|.|..|..+|..|.+.+ .+|+++++++ +..+ .+++.|+.++.+...+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~~-------~~~~----~~~~~g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETSR-------TRVD----ELRERGVRAVLGNAANEE 62 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCH-------HHHH----HHHHTTCEEEESCTTSHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCH-------HHHH----HHHHcCCCEEECCCCCHH
Confidence 38999999999999999998766 8999999852 2222 344568877654211100
Q ss_pred CCeEEEcCCcEEecceEEEecCCCC
Q 013810 311 SQKLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 311 ~~~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
+ +..-..-.+|.+|++++...
T Consensus 63 ---~-l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 63 ---I-MQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp ---H-HHHTTGGGCSEEEECCSCHH
T ss_pred ---H-HHhcCcccCCEEEEECCChH
Confidence 0 00001135899999988654
No 456
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.01 E-value=0.14 Score=46.60 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.+++|.|||+|.-|-..|..|+ .|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 3589999999999999999999 9999999998753
No 457
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.96 E-value=0.14 Score=47.16 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=31.0
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 458
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=91.95 E-value=0.13 Score=49.37 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 277 (436)
+|+|||+|.+|+-+|..|++.+ .+|+++++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G--------------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNG--------------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT--------------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCC
Confidence 7999999999999999999866 8999999853
No 459
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.95 E-value=0.1 Score=48.58 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=30.5
Q ss_pred CCCCcEEEECC-chHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 60 NEKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 60 ~~~~~VvIIGg-G~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..+++|+|.|| |+-|...+..|.+.|++|+++++...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34578999999 99999999999999999999988653
No 460
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.93 E-value=0.13 Score=46.15 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=30.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
.++++|+|+|-+|.++|..|.+.|.+|++++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 468999999999999999999999999999886
No 461
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.93 E-value=0.14 Score=45.85 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++++|||+|-+|-++|..|.+.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999998999998864
No 462
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.92 E-value=0.14 Score=44.34 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=30.9
Q ss_pred CCcEEEECC-chHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGg-G~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|+|.|| |..|...+..|.+.|++|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999999864
No 463
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.87 E-value=0.14 Score=47.42 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=30.4
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC--eEEEEcCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPR 94 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~ 94 (436)
..++|+|||+|..|.++|..|...|+ +++|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 45789999999999999999988887 89999975
No 464
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.86 E-value=0.1 Score=49.20 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 64 ~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 465
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.82 E-value=0.13 Score=48.69 Aligned_cols=35 Identities=26% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
...+|+|||+|..|..+|..++..|.+|+++|+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35789999999999999999999999999999864
No 466
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.81 E-value=0.086 Score=48.46 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=29.2
Q ss_pred CcEEEECCchHHHHHHHhcccC-----C-CeEEEEcC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS-----L-YDVVCVSP 93 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~-----g-~~v~lie~ 93 (436)
++|.|||+|.-|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999998 9 99999987
No 467
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.75 E-value=0.11 Score=50.27 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=30.2
Q ss_pred cEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 64 ~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 468
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.71 E-value=0.14 Score=45.23 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.1
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
..++|.|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 357899999999999999999999999999998743
No 469
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.69 E-value=0.14 Score=46.81 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=31.5
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999874
No 470
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.57 E-value=0.15 Score=46.77 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~~ 96 (436)
++|+|||+|..|.+.|..|++. +++|+++|.++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 3799999999999999999874 789999998753
No 471
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.54 E-value=0.15 Score=48.74 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 64 ~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 472
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.54 E-value=0.17 Score=46.20 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=30.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC-eEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~-~v~lie~~ 94 (436)
.++|+|||+|.+|.++|..|.+.|. +|+|+++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999998 89999886
No 473
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.53 E-value=0.17 Score=42.82 Aligned_cols=33 Identities=15% Similarity=0.355 Sum_probs=30.5
Q ss_pred CcEEEECC-chHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGg-G~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|+|+|| |.-|...+..|.+.|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999998864
No 474
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.51 E-value=0.16 Score=46.85 Aligned_cols=34 Identities=24% Similarity=0.479 Sum_probs=29.7
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
.++|+|||+|..|.+.|..|+..+. +++++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999988665 799999863
No 475
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.50 E-value=0.2 Score=45.32 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=30.7
Q ss_pred CcEEEECC-chHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGg-G~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.|||+ |.-|...|..|.+.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 68999999 9999999999999999999999864
No 476
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.49 E-value=0.14 Score=49.00 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 277 (436)
+|+|||+|.+|+-+|..|++.+ .+|+++++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G--------------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAG--------------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CceEEEeCCC
Confidence 6999999999999999999866 8999999854
No 477
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.49 E-value=0.48 Score=43.59 Aligned_cols=77 Identities=18% Similarity=0.253 Sum_probs=46.6
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEEeC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDS 311 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i~~ 311 (436)
+|+|||+|..|.-+|..|++.+ .+|+++ +. ++.. +.+++.|+.+..........
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G--------------~~V~l~-~~-------~~~~----~~i~~~g~~~~~~~~~~~~~ 74 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAG--------------HEVILI-AR-------PQHV----QAIEATGLRLETQSFDEQVK 74 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT--------------CEEEEE-CC-------HHHH----HHHHHHCEEEECSSCEEEEC
T ss_pred cEEEECcCHHHHHHHHHHHHCC--------------CeEEEE-Ec-------HhHH----HHHHhCCeEEEcCCCcEEEe
Confidence 8999999999999999998765 799999 53 1222 23444566654221111010
Q ss_pred CeEEEcCCcE-EecceEEEecCCCC
Q 013810 312 QKLILNDGTE-VPYGLLVWSTGVGP 335 (436)
Q Consensus 312 ~~v~~~~g~~-i~~D~vi~a~G~~p 335 (436)
-.+ ..+-+. -.+|+||+|+....
T Consensus 75 ~~~-~~~~~~~~~~D~vilavk~~~ 98 (318)
T 3hwr_A 75 VSA-SSDPSAVQGADLVLFCVKSTD 98 (318)
T ss_dssp CEE-ESCGGGGTTCSEEEECCCGGG
T ss_pred eee-eCCHHHcCCCCEEEEEccccc
Confidence 011 122111 25899999987653
No 478
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.46 E-value=0.15 Score=47.09 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.7
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
..++|+|||+|..|.++|..|+..++ +++|+|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34789999999999999999998777 899999853
No 479
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=91.45 E-value=0.16 Score=47.62 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
+|+|||+|.+|+-+|..|++.+ .+|+|+++.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~G--------------~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARKG--------------YSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CEEEEEecc
Confidence 7999999999999999998765 899999974
No 480
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.43 E-value=0.14 Score=44.26 Aligned_cols=33 Identities=33% Similarity=0.328 Sum_probs=30.2
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998863
No 481
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.43 E-value=0.15 Score=46.16 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++|.|||.|.-|...|..|.+.|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998743
No 482
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.39 E-value=0.16 Score=47.72 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=31.8
Q ss_pred CCCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 61 ~~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999999874
No 483
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.35 E-value=0.15 Score=49.32 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.9
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
.++.|||.|.-|+..|..|++.|++|+++|+++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999999999999999999998754
No 484
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.25 E-value=0.13 Score=48.08 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 013810 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (436)
Q Consensus 232 ~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 277 (436)
+|+|||+|.+|+-+|..|++.+ .+|+|+++.+
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G--------------~~V~vlE~~~ 37 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGG--------------HEVLVAEAAE 37 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCC
Confidence 7999999999999999999866 8999999863
No 485
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.24 E-value=0.23 Score=48.37 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=50.1
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCcccHHHHHHHHHHHHhcCCEEEecceEEE
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDV 309 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~l~~~~~~~~~~~~~~l~~~gV~i~~~~v~~i 309 (436)
+++|+|||+|.+|...+..|.+.+ .+|+++... +.+++ .+...+.+|+++.+...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--------------a~V~vi~~~-----~~~~~----~~l~~~~~i~~~~~~~~-- 66 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--------------ARLTVNALT-----FIPQF----TVWANEGMLTLVEGPFD-- 66 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--------------BEEEEEESS-----CCHHH----HHHHTTTSCEEEESSCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--------------CEEEEEcCC-----CCHHH----HHHHhcCCEEEEECCCC--
Confidence 358999999999999999999876 899999863 22333 23333456777654211
Q ss_pred eCCeEEEcCCcEEecceEEEecCCCC
Q 013810 310 DSQKLILNDGTEVPYGLLVWSTGVGP 335 (436)
Q Consensus 310 ~~~~v~~~~g~~i~~D~vi~a~G~~p 335 (436)
++.--.+|+||.++|...
T Consensus 67 --------~~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 67 --------ETLLDSCWLAIAATDDDT 84 (457)
T ss_dssp --------GGGGTTCSEEEECCSCHH
T ss_pred --------ccccCCccEEEEcCCCHH
Confidence 111114899999999874
No 486
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=91.21 E-value=0.16 Score=48.04 Aligned_cols=42 Identities=19% Similarity=0.017 Sum_probs=32.2
Q ss_pred CCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhcC
Q 013810 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLAR 407 (436)
Q Consensus 356 ~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 407 (436)
+.|++...+|+|++|+.++. .-...|..||.+|+.|+.....
T Consensus 321 ~tle~k~~~~Lf~AGqi~G~----------~Gy~eAaa~Gl~AG~naa~~~~ 362 (443)
T 3g5s_A 321 ETLEFREAEGLYAAGVLAGV----------EGYLESAATGFLAGLNAARKAL 362 (443)
T ss_dssp TTSEETTEEEEEECGGGGTB----------CSHHHHHHHHHHHHHHHHHHHT
T ss_pred hhceecCCCCEEECcccccc----------HHHHHHHHhHHHHHHHHHHHhc
Confidence 56776678899999999885 3456788899999988876543
No 487
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.21 E-value=0.15 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=29.5
Q ss_pred CcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
++|+|||+|..|...|..|...|+ +++|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 689999999999999999998888 899999864
No 488
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.20 E-value=0.15 Score=46.56 Aligned_cols=34 Identities=12% Similarity=0.198 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999999864
No 489
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.19 E-value=0.14 Score=49.97 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=30.5
Q ss_pred CcEEEECCchHHHHHHHhcccC--CCeEEEEcCCC
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~--g~~v~lie~~~ 95 (436)
++|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 89999999864
No 490
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.11 E-value=0.12 Score=46.82 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.3
Q ss_pred CcEEEECCchHHHHHHHhcccCCCeEEEEcCCCc
Q 013810 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (436)
Q Consensus 63 ~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~~ 96 (436)
++|.|||.|.-|...|..|++.|++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 491
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.11 E-value=0.16 Score=46.75 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCC-CeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g-~~v~lie~~~ 95 (436)
.++|.|||.|.-|...|..|++.| ++|+++|+++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999864
No 492
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.10 E-value=0.18 Score=43.18 Aligned_cols=32 Identities=34% Similarity=0.376 Sum_probs=29.7
Q ss_pred cEEEEC-CchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 64 RVVVLG-SGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 64 ~VvIIG-gG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
+|+||| +|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999863
No 493
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.04 E-value=0.26 Score=45.48 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=30.6
Q ss_pred CCcEEEECCchHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
.++|.|||+|..|.++|..|+..|+ +++|+|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4789999999999999999998887 899999853
No 494
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.03 E-value=0.26 Score=44.96 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=30.6
Q ss_pred CcEEEEC-CchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 63 PRVVVLG-SGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 63 ~~VvIIG-gG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
++|.||| +|.-|.+.|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5799999 99999999999999999999999764
No 495
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.01 E-value=0.18 Score=46.91 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=31.3
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~~ 95 (436)
.++|.|||+|.-|...|..|.+.|++|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999863
No 496
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=90.83 E-value=0.11 Score=48.68 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=31.4
Q ss_pred CCcEEEECCchHHHHHHHhcccCC-------CeEEEEcCCCc
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSL-------YDVVCVSPRNH 96 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g-------~~v~lie~~~~ 96 (436)
+++|.|||+|.-|.+.|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999988 89999998754
No 497
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.82 E-value=0.25 Score=40.01 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=29.1
Q ss_pred cCcEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 013810 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (436)
Q Consensus 230 ~~~vvViG~G~~g~e~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 276 (436)
..+|+|+|+|.+|..+|..|...+ .+|+++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 358999999999999999998765 799999885
No 498
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.71 E-value=0.19 Score=46.31 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=29.2
Q ss_pred CCcEEEECCchHHHHHHHhcccCCCeEEEEcCC
Q 013810 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (436)
Q Consensus 62 ~~~VvIIGgG~AGl~aA~~L~~~g~~v~lie~~ 94 (436)
.++|+|||+|.-|.+.|..|++.|++|+++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 478999999999999999999999999999 65
No 499
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=90.69 E-value=0.2 Score=46.63 Aligned_cols=34 Identities=12% Similarity=0.323 Sum_probs=29.5
Q ss_pred CCcEEEECC-chHHHHHHHhcccCCC--eEEEEcCCC
Q 013810 62 KPRVVVLGS-GWAGCRLMKGIDTSLY--DVVCVSPRN 95 (436)
Q Consensus 62 ~~~VvIIGg-G~AGl~aA~~L~~~g~--~v~lie~~~ 95 (436)
.++|+|||+ |..|.++|..+...|. +++|+|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 478999998 9999999999988774 799999753
No 500
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.66 E-value=0.18 Score=51.54 Aligned_cols=43 Identities=12% Similarity=0.012 Sum_probs=32.0
Q ss_pred CCCCCCCCCCEEEeccccccccCCCCccCCccHHHHHHHHHHHHhhhhhhc
Q 013810 356 EWLRVPSVQDVFAVGDCSGYLESTGKTVLPALAQVSYEQLHLFQKPSFLLA 406 (436)
Q Consensus 356 ~~~~~t~~~~Vya~GD~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 406 (436)
..++ |++|++||+|||+.... ...+..+..+|+.++.++..+.
T Consensus 446 ~~~~-t~v~gl~a~Ge~~~~~~-------hg~~~~sl~~g~~ag~~a~~~~ 488 (662)
T 3gyx_A 446 YNRM-TTVEGLWTCADGVGASG-------HKFSSGSHAEGRIVGKQMVRWY 488 (662)
T ss_dssp CTTB-CSSBTEECCSSSBCSCC-------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-CccCCeEeCcccccccc-------CccHhHHHHHHHHHHHHHHHHH
Confidence 5677 99999999999986311 3337778888888888776543
Done!