Query 013813
Match_columns 436
No_of_seqs 361 out of 2598
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:35:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013813.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013813hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b0p_A TRNA-dihydrouridine syn 100.0 5E-53 1.7E-57 428.2 28.2 300 102-412 3-314 (350)
2 1vhn_A Putative flavin oxidore 100.0 6.3E-53 2.2E-57 422.0 26.1 301 102-413 4-307 (318)
3 1z41_A YQJM, probable NADH-dep 100.0 5.2E-33 1.8E-37 280.1 22.0 231 102-332 17-323 (338)
4 2r14_A Morphinone reductase; H 100.0 6.8E-33 2.3E-37 283.2 19.0 227 102-332 23-344 (377)
5 1vyr_A Pentaerythritol tetrani 100.0 5.5E-32 1.9E-36 275.3 20.4 226 102-332 17-339 (364)
6 2gou_A Oxidoreductase, FMN-bin 100.0 7.6E-32 2.6E-36 274.4 18.8 226 102-332 17-338 (365)
7 1icp_A OPR1, 12-oxophytodienoa 100.0 4.5E-31 1.5E-35 269.7 17.4 226 102-332 28-346 (376)
8 2hsa_B 12-oxophytodienoate red 100.0 3.2E-31 1.1E-35 272.9 16.4 228 102-332 30-364 (402)
9 3gr7_A NADPH dehydrogenase; fl 100.0 6.2E-30 2.1E-34 258.0 22.9 231 102-332 17-323 (340)
10 1jub_A Dihydroorotate dehydrog 100.0 4.1E-30 1.4E-34 255.3 20.7 224 102-331 12-287 (311)
11 2e6f_A Dihydroorotate dehydrog 100.0 3.1E-29 1.1E-33 249.3 20.8 224 102-331 14-289 (314)
12 3kru_A NADH:flavin oxidoreduct 100.0 3E-29 1E-33 253.2 20.6 228 102-330 16-321 (343)
13 1f76_A Dihydroorotate dehydrog 100.0 3.5E-29 1.2E-33 251.4 20.8 221 102-331 55-334 (336)
14 4ef8_A Dihydroorotate dehydrog 100.0 5.1E-29 1.8E-33 252.2 18.6 169 156-330 125-321 (354)
15 1ps9_A 2,4-dienoyl-COA reducta 100.0 8.6E-29 2.9E-33 269.4 20.6 231 102-332 17-326 (671)
16 3hgj_A Chromate reductase; TIM 100.0 2.3E-28 7.9E-33 247.3 21.7 231 102-332 16-334 (349)
17 3zwt_A Dihydroorotate dehydrog 100.0 2.1E-28 7.2E-33 249.0 20.1 167 157-330 146-342 (367)
18 3oix_A Putative dihydroorotate 100.0 3.3E-28 1.1E-32 245.6 20.0 167 155-330 126-319 (345)
19 1o94_A Tmadh, trimethylamine d 100.0 1.8E-28 6.1E-33 269.5 19.5 230 102-333 21-338 (729)
20 3k30_A Histamine dehydrogenase 100.0 1.9E-28 6.5E-33 267.6 18.4 231 102-333 26-341 (690)
21 3l5a_A NADH/flavin oxidoreduct 100.0 3.6E-28 1.2E-32 251.2 19.1 229 102-332 40-362 (419)
22 1tv5_A Dhodehase, dihydroorota 100.0 1E-27 3.4E-32 249.0 19.2 222 102-331 92-418 (443)
23 1ep3_A Dihydroorotate dehydrog 100.0 7.4E-28 2.5E-32 238.1 16.9 168 156-330 97-284 (311)
24 3l5l_A Xenobiotic reductase A; 100.0 2.1E-27 7.1E-32 241.5 19.4 231 102-332 16-341 (363)
25 4ab4_A Xenobiotic reductase B; 100.0 1.9E-27 6.6E-32 241.5 18.8 220 102-332 16-324 (362)
26 3gka_A N-ethylmaleimide reduct 99.9 3E-27 1E-31 240.0 18.2 221 102-333 24-333 (361)
27 3i65_A Dihydroorotate dehydrog 99.9 2.5E-26 8.7E-31 236.0 17.3 167 157-330 181-389 (415)
28 1gte_A Dihydropyrimidine dehyd 99.9 5.8E-26 2E-30 258.0 21.2 223 102-330 543-831 (1025)
29 3aty_A Tcoye, prostaglandin F2 99.9 1.7E-25 5.9E-30 228.6 18.6 157 169-332 173-352 (379)
30 3tjl_A NADPH dehydrogenase; OL 99.9 1E-25 3.5E-30 231.4 12.9 231 102-333 26-363 (407)
31 2nli_A Lactate oxidase; flavoe 99.9 1.9E-23 6.6E-28 212.7 18.8 201 102-320 80-317 (368)
32 1p0k_A Isopentenyl-diphosphate 99.9 1.9E-22 6.6E-27 203.5 21.3 205 102-323 55-287 (349)
33 2nzl_A Hydroxyacid oxidase 1; 99.9 7.6E-22 2.6E-26 202.4 16.5 201 102-321 94-341 (392)
34 4a3u_A NCR, NADH\:flavin oxido 99.9 1.3E-21 4.4E-26 198.5 17.8 229 102-333 16-332 (358)
35 1gox_A (S)-2-hydroxy-acid oxid 99.9 3.2E-21 1.1E-25 196.4 19.7 198 102-321 71-314 (370)
36 3tjx_A Dihydroorotate dehydrog 99.8 6.2E-20 2.1E-24 185.7 19.8 170 155-330 124-321 (354)
37 2z6i_A Trans-2-enoyl-ACP reduc 99.8 5.2E-20 1.8E-24 184.7 19.1 192 98-326 7-201 (332)
38 1kbi_A Cytochrome B2, L-LCR; f 99.8 6.4E-20 2.2E-24 194.0 20.6 201 102-321 189-437 (511)
39 1vcf_A Isopentenyl-diphosphate 99.8 6E-20 2.1E-24 184.2 18.5 204 102-322 58-291 (332)
40 4gbu_A NADPH dehydrogenase 1; 99.8 8.2E-20 2.8E-24 187.9 15.1 232 102-333 29-365 (400)
41 3bo9_A Putative nitroalkan dio 99.8 1.5E-17 5.1E-22 166.6 20.1 192 97-325 20-214 (326)
42 1p4c_A L(+)-mandelate dehydrog 99.8 8.8E-18 3E-22 171.6 17.0 199 102-321 72-312 (380)
43 2gjl_A Hypothetical protein PA 99.8 3.6E-17 1.2E-21 163.5 20.5 188 102-324 15-209 (328)
44 1mzh_A Deoxyribose-phosphate a 99.8 3.7E-18 1.3E-22 162.5 12.0 190 106-330 12-214 (225)
45 3vkj_A Isopentenyl-diphosphate 99.7 1.8E-17 6E-22 168.7 17.5 206 102-321 59-301 (368)
46 3bw2_A 2-nitropropane dioxygen 99.7 1.6E-16 5.4E-21 161.5 20.7 193 102-327 10-248 (369)
47 1ypf_A GMP reductase; GUAC, pu 99.7 5.2E-17 1.8E-21 163.3 16.8 191 102-322 46-245 (336)
48 2agk_A 1-(5-phosphoribosyl)-5- 99.7 1.2E-16 4.3E-21 155.2 9.7 182 120-330 45-253 (260)
49 3sr7_A Isopentenyl-diphosphate 99.7 9.9E-16 3.4E-20 155.5 15.9 205 102-321 86-312 (365)
50 1jvn_A Glutamine, bifunctional 99.7 5.4E-16 1.8E-20 165.6 14.2 207 121-331 285-541 (555)
51 1eep_A Inosine 5'-monophosphat 99.6 2.2E-15 7.6E-20 154.8 16.6 201 102-327 42-296 (404)
52 2y88_A Phosphoribosyl isomeras 99.6 1E-14 3.4E-19 139.0 14.5 153 157-330 74-239 (244)
53 3sgz_A Hydroxyacid oxidase 2; 99.6 4.6E-15 1.6E-19 149.6 12.2 242 102-376 69-348 (352)
54 3khj_A Inosine-5-monophosphate 99.6 5.1E-14 1.7E-18 142.9 17.6 193 102-327 45-247 (361)
55 1vzw_A Phosphoribosyl isomeras 99.5 1.3E-13 4.6E-18 131.4 14.7 155 156-330 74-236 (244)
56 3r2g_A Inosine 5'-monophosphat 99.5 1.7E-13 5.7E-18 138.8 14.9 191 102-325 42-237 (361)
57 3tdn_A FLR symmetric alpha-bet 99.5 2E-14 6.9E-19 137.7 7.3 153 157-331 79-244 (247)
58 2qr6_A IMP dehydrogenase/GMP r 99.5 8.1E-13 2.8E-17 135.2 19.5 203 102-324 67-314 (393)
59 3o07_A Pyridoxine biosynthesis 99.5 2.4E-13 8.2E-18 131.5 13.8 138 176-325 24-238 (291)
60 1qo2_A Molecule: N-((5-phospho 99.5 6.4E-13 2.2E-17 126.7 14.9 152 157-330 73-237 (241)
61 2yzr_A Pyridoxal biosynthesis 99.5 9.8E-14 3.3E-18 137.6 8.7 144 173-324 27-279 (330)
62 1h5y_A HISF; histidine biosynt 99.4 4.7E-12 1.6E-16 119.9 17.6 189 118-329 38-240 (253)
63 1ka9_F Imidazole glycerol phos 99.4 3.3E-12 1.1E-16 122.0 16.5 153 156-330 74-239 (252)
64 2qjg_A Putative aldolase MJ040 99.4 2.5E-12 8.5E-17 124.7 15.7 191 104-329 35-250 (273)
65 2w6r_A Imidazole glycerol phos 99.4 6.1E-12 2.1E-16 121.2 17.2 187 120-330 37-243 (266)
66 4fo4_A Inosine 5'-monophosphat 99.4 3.4E-12 1.2E-16 129.6 15.2 192 102-325 46-249 (366)
67 1thf_D HISF protein; thermophI 99.4 5.9E-12 2E-16 120.4 15.9 153 156-330 73-238 (253)
68 3ffs_A Inosine-5-monophosphate 99.3 8.9E-12 3E-16 127.8 15.1 128 174-325 148-284 (400)
69 1jcn_A Inosine monophosphate d 99.3 1.7E-11 5.8E-16 129.5 13.9 141 166-328 251-399 (514)
70 2c6q_A GMP reductase 2; TIM ba 99.3 9.2E-11 3.1E-15 118.5 16.3 192 102-324 57-260 (351)
71 2pgw_A Muconate cycloisomerase 99.2 1.6E-10 5.4E-15 117.7 17.3 147 158-330 137-285 (384)
72 1y0e_A Putative N-acetylmannos 99.2 6.6E-11 2.2E-15 111.1 13.0 158 160-326 9-213 (223)
73 4fxs_A Inosine-5'-monophosphat 99.2 3.6E-11 1.2E-15 126.7 11.5 141 160-324 221-371 (496)
74 3tdn_A FLR symmetric alpha-bet 99.2 3.7E-11 1.2E-15 115.0 10.1 100 228-331 22-123 (247)
75 4avf_A Inosine-5'-monophosphat 99.2 7.2E-11 2.5E-15 124.2 12.2 136 165-324 224-369 (490)
76 3q58_A N-acetylmannosamine-6-p 99.2 1.5E-10 5.2E-15 110.3 11.8 126 174-327 93-220 (229)
77 3igs_A N-acetylmannosamine-6-p 99.1 2.2E-10 7.4E-15 109.4 12.0 125 174-326 93-219 (232)
78 2nv1_A Pyridoxal biosynthesis 99.1 4.3E-10 1.5E-14 111.2 14.1 154 158-324 22-246 (305)
79 1yxy_A Putative N-acetylmannos 99.1 2.2E-10 7.6E-15 108.4 10.7 101 212-324 119-222 (234)
80 1mdl_A Mandelate racemase; iso 99.1 1.2E-09 4.2E-14 110.0 14.4 143 157-324 133-278 (359)
81 2ovl_A Putative racemase; stru 99.0 2E-09 7E-14 109.0 14.3 135 168-327 146-283 (371)
82 2rdx_A Mandelate racemase/muco 99.0 2.4E-09 8.3E-14 108.7 14.6 140 158-326 135-277 (379)
83 2nql_A AGR_PAT_674P, isomerase 99.0 3.6E-09 1.2E-13 107.8 14.3 143 158-327 153-299 (388)
84 1geq_A Tryptophan synthase alp 99.0 5.9E-09 2E-13 99.3 14.8 159 157-322 4-226 (248)
85 3eez_A Putative mandelate race 99.0 4.1E-09 1.4E-13 107.3 14.2 145 156-329 133-280 (378)
86 1qo2_A Molecule: N-((5-phospho 99.0 5.8E-10 2E-14 106.1 7.3 97 228-329 13-115 (241)
87 2uva_G Fatty acid synthase bet 99.0 1E-08 3.6E-13 122.8 18.8 203 96-324 576-803 (2060)
88 1xg4_A Probable methylisocitra 99.0 9.1E-09 3.1E-13 101.5 15.4 210 95-320 8-239 (295)
89 1vrd_A Inosine-5'-monophosphat 99.0 3.3E-09 1.1E-13 111.4 13.0 136 169-327 236-380 (494)
90 2qdd_A Mandelate racemase/muco 99.0 6.5E-09 2.2E-13 105.5 14.5 144 157-329 134-280 (378)
91 3usb_A Inosine-5'-monophosphat 98.9 2.9E-09 1E-13 112.6 11.8 140 160-324 247-396 (511)
92 1rvk_A Isomerase/lactonizing e 98.9 2.2E-08 7.5E-13 101.6 17.4 137 167-322 148-288 (382)
93 2p8b_A Mandelate racemase/muco 98.9 1.1E-08 3.6E-13 103.5 14.4 144 157-326 130-277 (369)
94 2hzg_A Mandelate racemase/muco 98.9 1.8E-08 6.2E-13 103.1 16.2 149 157-328 133-289 (401)
95 3vnd_A TSA, tryptophan synthas 98.9 2E-08 6.9E-13 97.7 14.7 162 156-321 16-240 (267)
96 1nu5_A Chloromuconate cycloiso 98.9 3.7E-08 1.3E-12 99.5 16.5 141 159-324 133-277 (370)
97 3ozy_A Putative mandelate race 98.9 3.6E-08 1.2E-12 100.6 16.2 139 158-322 139-283 (389)
98 2zbt_A Pyridoxal biosynthesis 98.9 4.4E-08 1.5E-12 96.1 16.1 148 158-323 22-245 (297)
99 1tkk_A Similar to chloromucona 98.8 4.6E-08 1.6E-12 98.7 15.9 141 158-323 130-275 (366)
100 2ps2_A Putative mandelate race 98.8 5.8E-08 2E-12 98.2 16.5 140 156-324 134-277 (371)
101 2qgy_A Enolase from the enviro 98.8 4.9E-08 1.7E-12 99.6 15.7 134 166-324 147-283 (391)
102 2gl5_A Putative dehydratase pr 98.8 4.4E-08 1.5E-12 100.4 15.4 147 157-316 129-299 (410)
103 1wv2_A Thiazole moeity, thiazo 98.8 9.9E-08 3.4E-12 91.7 16.7 145 157-321 73-221 (265)
104 1wa3_A 2-keto-3-deoxy-6-phosph 98.8 2E-08 6.8E-13 92.9 10.9 138 157-321 9-183 (205)
105 4gj1_A 1-(5-phosphoribosyl)-5- 98.8 4.5E-08 1.5E-12 93.9 13.1 152 158-329 74-237 (243)
106 1thf_D HISF protein; thermophI 98.8 7.9E-09 2.7E-13 98.5 7.8 89 239-331 30-118 (253)
107 1qop_A Tryptophan synthase alp 98.8 1.7E-07 5.7E-12 91.0 17.1 158 157-321 16-239 (268)
108 3nav_A Tryptophan synthase alp 98.8 2.7E-08 9.1E-13 97.0 11.1 164 156-321 18-242 (271)
109 1ka9_F Imidazole glycerol phos 98.8 1E-08 3.5E-13 97.7 7.8 89 239-331 31-119 (252)
110 2poz_A Putative dehydratase; o 98.8 4.3E-08 1.5E-12 99.9 12.4 140 166-315 135-279 (392)
111 2oz8_A MLL7089 protein; struct 98.7 3.5E-07 1.2E-11 93.1 17.8 123 168-316 145-273 (389)
112 1rd5_A Tryptophan synthase alp 98.7 7.6E-08 2.6E-12 92.8 12.1 161 156-321 16-235 (262)
113 2og9_A Mandelate racemase/muco 98.7 1.6E-07 5.3E-12 95.9 15.0 124 168-316 162-288 (393)
114 2ox4_A Putative mandelate race 98.7 1.6E-07 5.4E-12 96.0 14.6 136 168-316 146-290 (403)
115 4adt_A Pyridoxine biosynthetic 98.7 3.1E-07 1.1E-11 90.6 15.9 53 272-325 193-247 (297)
116 1xm3_A Thiazole biosynthesis p 98.7 5.5E-07 1.9E-11 87.2 17.1 199 102-324 12-215 (264)
117 2qde_A Mandelate racemase/muco 98.7 2.5E-07 8.5E-12 94.5 14.9 135 158-318 135-272 (397)
118 3stp_A Galactonate dehydratase 98.7 4E-07 1.4E-11 93.7 16.2 146 156-320 166-315 (412)
119 2pp0_A L-talarate/galactarate 98.6 3.6E-07 1.2E-11 93.4 15.5 124 168-316 175-301 (398)
120 3rcy_A Mandelate racemase/muco 98.6 3.6E-07 1.2E-11 94.7 15.6 144 167-324 145-292 (433)
121 2qq6_A Mandelate racemase/muco 98.6 3.9E-07 1.3E-11 93.4 15.3 134 168-316 149-291 (410)
122 2gdq_A YITF; mandelate racemas 98.6 3.5E-07 1.2E-11 93.0 14.7 134 158-316 124-266 (382)
123 1tzz_A Hypothetical protein L1 98.6 4.8E-07 1.7E-11 92.2 15.2 124 168-316 165-295 (392)
124 2o56_A Putative mandelate race 98.6 4.5E-07 1.5E-11 92.8 14.7 136 168-316 152-296 (407)
125 3oa3_A Aldolase; structural ge 98.6 4.3E-07 1.5E-11 88.8 13.4 133 172-320 129-269 (288)
126 1h5y_A HISF; histidine biosynt 98.6 6.9E-08 2.4E-12 91.0 7.6 89 239-331 33-121 (253)
127 3rr1_A GALD, putative D-galact 98.6 6.5E-07 2.2E-11 91.9 15.2 145 156-317 113-260 (405)
128 3i4k_A Muconate lactonizing en 98.6 1.2E-06 4.2E-11 89.0 16.8 136 158-318 138-277 (383)
129 3sjn_A Mandelate racemase/muco 98.6 4.2E-07 1.4E-11 92.3 13.2 125 169-316 147-275 (374)
130 3ngj_A Deoxyribose-phosphate a 98.6 4.1E-07 1.4E-11 86.9 12.1 131 172-321 98-236 (239)
131 2y88_A Phosphoribosyl isomeras 98.6 7.9E-08 2.7E-12 91.0 7.1 87 240-331 32-118 (244)
132 3sbf_A Mandelate racemase / mu 98.6 6E-07 2.1E-11 91.9 14.0 158 156-323 121-289 (401)
133 3r4e_A Mandelate racemase/muco 98.5 3.6E-07 1.2E-11 94.1 12.0 152 156-317 131-302 (418)
134 2zad_A Muconate cycloisomerase 98.5 2.3E-06 7.7E-11 85.6 17.4 132 158-315 129-264 (345)
135 3r12_A Deoxyribose-phosphate a 98.5 8.5E-07 2.9E-11 85.6 13.6 133 172-321 114-252 (260)
136 1vzw_A Phosphoribosyl isomeras 98.5 9.2E-08 3.1E-12 90.8 6.8 87 240-331 33-119 (244)
137 2uv8_G Fatty acid synthase sub 98.5 5.5E-07 1.9E-11 107.7 14.7 204 96-324 583-810 (2051)
138 3ro6_B Putative chloromuconate 98.5 4.4E-07 1.5E-11 91.4 11.9 136 158-319 130-269 (356)
139 2v82_A 2-dehydro-3-deoxy-6-pho 98.5 7.6E-07 2.6E-11 82.7 12.2 149 156-322 5-182 (212)
140 1ofd_A Ferredoxin-dependent gl 98.5 2.6E-06 9E-11 98.6 18.9 113 208-324 1010-1136(1520)
141 3jva_A Dipeptide epimerase; en 98.5 1.8E-06 6.1E-11 86.9 15.6 137 159-321 130-269 (354)
142 3ndo_A Deoxyribose-phosphate a 98.5 1.3E-06 4.3E-11 83.2 13.5 133 172-321 83-226 (231)
143 4e5t_A Mandelate racemase / mu 98.5 9.2E-07 3.1E-11 90.7 13.3 137 167-317 150-290 (404)
144 3qja_A IGPS, indole-3-glycerol 98.5 3.9E-06 1.3E-10 81.7 17.0 142 156-329 112-255 (272)
145 3bjs_A Mandelate racemase/muco 98.5 8.1E-07 2.8E-11 91.7 12.8 124 167-316 183-311 (428)
146 2w6r_A Imidazole glycerol phos 98.5 2.2E-07 7.4E-12 89.2 7.7 88 239-330 30-120 (266)
147 1ujp_A Tryptophan synthase alp 98.5 7.1E-07 2.4E-11 87.0 11.3 156 158-322 16-235 (271)
148 3f4w_A Putative hexulose 6 pho 98.5 2E-06 7E-11 79.5 13.9 143 156-325 52-196 (211)
149 4af0_A Inosine-5'-monophosphat 98.5 6.4E-06 2.2E-10 86.6 18.7 130 166-319 277-416 (556)
150 4dwd_A Mandelate racemase/muco 98.5 3.5E-06 1.2E-10 86.1 16.5 142 156-317 124-272 (393)
151 2hxt_A L-fuconate dehydratase; 98.4 2.1E-06 7.3E-11 88.8 14.2 125 166-316 196-324 (441)
152 3cwo_X Beta/alpha-barrel prote 98.4 8.7E-07 3E-11 81.7 10.2 187 121-331 20-218 (237)
153 3zen_D Fatty acid synthase; tr 98.4 4.4E-07 1.5E-11 112.0 10.2 199 96-324 421-654 (3089)
154 1ub3_A Aldolase protein; schif 98.4 3.7E-06 1.3E-10 79.4 14.1 131 172-321 74-212 (220)
155 1viz_A PCRB protein homolog; s 98.4 1.4E-06 4.9E-11 83.4 11.3 141 174-331 24-226 (240)
156 4e4u_A Mandalate racemase/muco 98.4 2.8E-06 9.4E-11 87.4 14.2 140 166-319 142-285 (412)
157 3tji_A Mandelate racemase/muco 98.4 1.9E-06 6.5E-11 88.9 12.5 157 157-323 143-310 (422)
158 2ekc_A AQ_1548, tryptophan syn 98.4 4.2E-06 1.4E-10 80.9 14.1 157 158-322 17-240 (262)
159 3tj4_A Mandelate racemase; eno 98.4 5.5E-06 1.9E-10 83.9 15.2 134 158-316 138-278 (372)
160 3q45_A Mandelate racemase/muco 98.4 5.2E-06 1.8E-10 83.9 14.9 132 159-316 131-265 (368)
161 3my9_A Muconate cycloisomerase 98.3 7E-06 2.4E-10 83.2 15.5 137 158-319 136-275 (377)
162 3tha_A Tryptophan synthase alp 98.3 9.8E-07 3.3E-11 85.0 8.7 159 157-321 13-232 (252)
163 1zfj_A Inosine monophosphate d 98.3 2.2E-06 7.5E-11 89.7 12.0 132 172-327 235-376 (491)
164 3ddm_A Putative mandelate race 98.3 3.2E-06 1.1E-10 86.4 12.6 125 166-316 153-281 (392)
165 3ugv_A Enolase; enzyme functio 98.3 8.4E-06 2.9E-10 83.2 15.6 134 158-316 158-300 (390)
166 3toy_A Mandelate racemase/muco 98.3 1.2E-05 4E-10 81.9 16.4 135 157-316 156-294 (383)
167 3tsm_A IGPS, indole-3-glycerol 98.3 1.3E-05 4.4E-10 78.1 15.6 143 156-330 119-263 (272)
168 1chr_A Chloromuconate cycloiso 98.3 7.4E-06 2.5E-10 82.8 14.4 134 158-316 132-269 (370)
169 4gj1_A 1-(5-phosphoribosyl)-5- 98.3 6.8E-07 2.3E-11 85.6 6.3 89 239-331 31-119 (243)
170 3v3w_A Starvation sensing prot 98.3 7.9E-06 2.7E-10 84.3 14.6 149 156-317 137-308 (424)
171 3vcn_A Mannonate dehydratase; 98.3 5.7E-06 1.9E-10 85.4 13.5 149 157-318 139-310 (425)
172 3gd6_A Muconate cycloisomerase 98.3 8.4E-06 2.9E-10 83.1 14.5 143 158-328 128-280 (391)
173 1sjd_A N-acylamino acid racema 98.3 6.4E-06 2.2E-10 83.0 13.2 128 159-315 131-262 (368)
174 3dg3_A Muconate cycloisomerase 98.3 1.3E-05 4.3E-10 81.1 15.3 135 157-316 128-266 (367)
175 1tqj_A Ribulose-phosphate 3-ep 98.3 3E-06 1E-10 80.4 10.0 149 160-325 7-210 (230)
176 3i6e_A Muconate cycloisomerase 98.3 1.9E-05 6.6E-10 80.3 16.6 138 157-319 137-276 (385)
177 3fv9_G Mandelate racemase/muco 98.3 2.4E-05 8.2E-10 79.6 17.3 140 156-319 133-276 (386)
178 3vzx_A Heptaprenylglyceryl pho 98.2 3.7E-06 1.3E-10 79.9 10.0 84 237-330 138-222 (228)
179 2qr6_A IMP dehydrogenase/GMP r 98.2 4.2E-06 1.4E-10 85.3 11.1 103 209-319 140-242 (393)
180 3vk5_A MOEO5; TIM barrel, tran 98.2 2.6E-06 9E-11 82.9 9.0 80 242-330 189-272 (286)
181 1h1y_A D-ribulose-5-phosphate 98.2 9.1E-06 3.1E-10 76.6 12.5 144 157-325 64-210 (228)
182 1w8s_A FBP aldolase, fructose- 98.2 2.6E-05 9E-10 75.4 16.0 127 175-327 98-242 (263)
183 1ea0_A Glutamate synthase [NAD 98.2 3.6E-06 1.2E-10 97.3 10.6 111 209-323 976-1100(1479)
184 3r0u_A Enzyme of enolase super 98.2 4.2E-05 1.4E-09 77.7 16.5 135 158-318 132-271 (379)
185 3t6c_A RSPA, putative MAND fam 98.2 3.5E-05 1.2E-09 79.9 16.0 157 156-322 143-327 (440)
186 1yad_A Regulatory protein TENI 98.1 4.1E-06 1.4E-10 78.3 8.1 78 245-324 123-200 (221)
187 1vc4_A Indole-3-glycerol phosp 98.1 2.1E-05 7.1E-10 75.8 13.1 141 156-330 105-250 (254)
188 4e4f_A Mannonate dehydratase; 98.1 1.5E-05 5.2E-10 82.2 13.0 150 157-316 138-309 (426)
189 1me8_A Inosine-5'-monophosphat 98.1 1.5E-05 5.2E-10 83.9 13.1 123 177-322 249-387 (503)
190 2fli_A Ribulose-phosphate 3-ep 98.1 1.4E-05 4.9E-10 74.2 11.5 146 160-325 6-207 (220)
191 1r0m_A N-acylamino acid racema 98.1 1.7E-05 5.7E-10 80.2 12.9 128 159-315 138-268 (375)
192 3ajx_A 3-hexulose-6-phosphate 98.1 5.2E-05 1.8E-09 69.7 14.9 140 157-324 53-194 (207)
193 1rpx_A Protein (ribulose-phosp 98.1 2.7E-05 9.4E-10 73.1 13.2 140 157-326 68-217 (230)
194 1n7k_A Deoxyribose-phosphate a 98.1 2.6E-05 8.9E-10 74.3 12.9 130 172-321 91-228 (234)
195 2zc8_A N-acylamino acid racema 98.1 2.5E-05 8.5E-10 78.7 13.1 129 159-316 131-262 (369)
196 2htm_A Thiazole biosynthesis p 98.1 3.1E-05 1.1E-09 74.6 13.0 145 157-321 63-212 (268)
197 3mqt_A Mandelate racemase/muco 98.1 3.7E-05 1.3E-09 78.4 14.4 125 171-318 155-284 (394)
198 3tcs_A Racemase, putative; PSI 98.1 5.6E-05 1.9E-09 77.1 15.6 134 168-319 146-283 (388)
199 4e8g_A Enolase, mandelate race 98.1 5E-05 1.7E-09 77.5 14.8 134 158-319 154-291 (391)
200 3go2_A Putative L-alanine-DL-g 98.0 6E-05 2.1E-09 77.2 14.9 138 167-316 142-292 (409)
201 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 7E-06 2.4E-10 76.7 7.2 145 157-321 12-184 (207)
202 3fcp_A L-Ala-D/L-Glu epimerase 98.0 0.00011 3.8E-09 74.5 16.3 140 158-322 137-280 (381)
203 3dgb_A Muconate cycloisomerase 98.0 7.7E-05 2.6E-09 75.7 15.1 137 158-319 138-278 (382)
204 1xi3_A Thiamine phosphate pyro 98.0 8.3E-06 2.8E-10 75.2 7.2 76 246-324 122-198 (215)
205 3mwc_A Mandelate racemase/muco 98.0 4.5E-05 1.6E-09 78.0 13.1 135 158-321 150-290 (400)
206 3mkc_A Racemase; metabolic pro 98.0 7.6E-05 2.6E-09 76.1 13.9 123 171-316 160-287 (394)
207 4a29_A Engineered retro-aldol 98.0 0.00013 4.4E-09 70.1 14.6 144 167-329 64-246 (258)
208 3p3b_A Mandelate racemase/muco 98.0 2.9E-05 1E-09 79.0 10.8 125 170-315 150-284 (392)
209 2tps_A Protein (thiamin phosph 97.9 2.3E-05 7.7E-10 73.1 8.9 75 245-324 129-208 (227)
210 3ovp_A Ribulose-phosphate 3-ep 97.9 6.9E-05 2.3E-09 71.0 12.3 146 159-325 6-206 (228)
211 3inp_A D-ribulose-phosphate 3- 97.9 2.3E-05 8E-10 75.2 8.5 146 159-325 29-232 (246)
212 3glc_A Aldolase LSRF; TIM barr 97.9 5.9E-05 2E-09 74.2 11.3 143 157-325 105-266 (295)
213 1vcv_A Probable deoxyribose-ph 97.9 0.00023 7.7E-09 67.5 14.2 125 171-307 69-205 (226)
214 4hnl_A Mandelate racemase/muco 97.8 0.0002 6.8E-09 73.5 14.7 150 156-315 141-301 (421)
215 3o63_A Probable thiamine-phosp 97.8 4E-05 1.4E-09 73.4 8.3 80 245-327 148-230 (243)
216 2p10_A MLL9387 protein; putati 97.8 4E-05 1.4E-09 74.5 8.3 158 156-323 93-266 (286)
217 4a35_A Mitochondrial enolase s 97.8 0.00035 1.2E-08 72.4 16.0 125 166-316 199-329 (441)
218 4eiv_A Deoxyribose-phosphate a 97.8 7.3E-05 2.5E-09 73.0 10.0 120 171-307 102-253 (297)
219 1p1x_A Deoxyribose-phosphate a 97.8 0.00012 4.1E-09 70.8 11.3 120 171-307 87-219 (260)
220 2a4a_A Deoxyribose-phosphate a 97.8 0.00018 6E-09 70.3 12.3 119 171-307 108-246 (281)
221 3w01_A Heptaprenylglyceryl pho 97.8 7.3E-05 2.5E-09 71.1 9.3 83 238-330 144-228 (235)
222 1i4n_A Indole-3-glycerol phosp 97.8 0.00036 1.2E-08 67.1 14.3 142 156-330 100-244 (251)
223 3ctl_A D-allulose-6-phosphate 97.8 7.6E-05 2.6E-09 70.9 9.3 144 160-324 3-204 (231)
224 3ik4_A Mandelate racemase/muco 97.7 0.00057 1.9E-08 68.9 15.9 134 158-316 133-270 (365)
225 3ih1_A Methylisocitrate lyase; 97.7 0.0012 4E-08 65.2 17.7 207 92-320 17-247 (305)
226 1jvn_A Glutamine, bifunctional 97.7 4E-05 1.4E-09 81.7 7.6 92 239-331 280-395 (555)
227 1tqx_A D-ribulose-5-phosphate 97.7 0.00035 1.2E-08 66.1 13.0 139 156-324 63-209 (227)
228 2cu0_A Inosine-5'-monophosphat 97.7 0.00014 4.7E-09 76.2 10.6 123 174-322 232-363 (486)
229 2f6u_A GGGPS, (S)-3-O-geranylg 97.7 7.3E-05 2.5E-09 71.2 7.3 74 243-326 149-228 (234)
230 3dip_A Enolase; structural gen 97.6 0.00059 2E-08 69.9 13.7 127 177-316 166-295 (410)
231 2agk_A 1-(5-phosphoribosyl)-5- 97.6 3.6E-05 1.2E-09 74.3 4.1 81 239-331 38-123 (260)
232 4dxk_A Mandelate racemase / mu 97.6 0.00038 1.3E-08 71.1 11.5 128 177-316 162-291 (400)
233 4dye_A Isomerase; enolase fami 97.5 0.00097 3.3E-08 68.1 14.2 126 169-322 169-297 (398)
234 1pii_A N-(5'phosphoribosyl)ant 97.4 0.0032 1.1E-07 65.3 16.2 142 157-331 108-251 (452)
235 3cu2_A Ribulose-5-phosphate 3- 97.4 0.00079 2.7E-08 64.1 10.4 133 161-322 73-223 (237)
236 3ceu_A Thiamine phosphate pyro 97.3 0.00035 1.2E-08 64.9 7.2 77 245-324 101-180 (210)
237 3eoo_A Methylisocitrate lyase; 97.3 0.0053 1.8E-07 60.3 15.7 204 95-320 13-243 (298)
238 2pge_A MENC; OSBS, NYSGXRC, PS 97.3 0.0022 7.7E-08 64.7 13.2 134 158-316 152-291 (377)
239 1vhc_A Putative KHG/KDPG aldol 97.2 0.0018 6.2E-08 61.0 10.8 148 158-325 17-194 (224)
240 1q6o_A Humps, 3-keto-L-gulonat 97.2 0.0025 8.5E-08 59.2 11.5 135 162-324 63-199 (216)
241 3b8i_A PA4872 oxaloacetate dec 97.2 0.016 5.6E-07 56.6 17.2 206 93-320 10-238 (287)
242 4avf_A Inosine-5'-monophosphat 97.2 0.0016 5.6E-08 68.2 10.8 70 239-316 228-298 (490)
243 1wuf_A Hypothetical protein LI 97.1 0.0036 1.2E-07 63.5 13.1 128 159-315 151-281 (393)
244 3jr2_A Hexulose-6-phosphate sy 97.1 0.0015 5E-08 60.9 9.3 137 157-322 59-200 (218)
245 1to3_A Putative aldolase YIHT; 97.1 0.0032 1.1E-07 62.0 12.0 125 178-322 117-260 (304)
246 1ypf_A GMP reductase; GUAC, pu 97.1 0.0029 9.9E-08 63.0 11.2 97 209-316 79-177 (336)
247 3kts_A Glycerol uptake operon 97.1 0.0014 4.8E-08 60.4 8.1 70 242-323 117-186 (192)
248 3khj_A Inosine-5-monophosphate 97.1 0.0026 8.7E-08 64.2 10.8 95 209-316 79-173 (361)
249 3s5s_A Mandelate racemase/muco 97.0 0.0064 2.2E-07 61.8 12.8 133 159-316 135-271 (389)
250 2hjp_A Phosphonopyruvate hydro 96.9 0.052 1.8E-06 53.1 18.6 207 95-320 6-239 (290)
251 4hpn_A Putative uncharacterize 96.9 0.013 4.5E-07 58.9 14.7 115 175-315 152-268 (378)
252 1s2w_A Phosphoenolpyruvate pho 96.9 0.042 1.4E-06 53.8 17.8 207 94-320 9-242 (295)
253 3u9i_A Mandelate racemase/muco 96.9 0.0096 3.3E-07 60.5 13.6 141 159-316 156-300 (393)
254 2chr_A Chloromuconate cycloiso 96.9 0.018 6.2E-07 57.6 15.2 131 160-315 134-268 (370)
255 2ze3_A DFA0005; organic waste 96.8 0.015 5.1E-07 56.5 13.5 199 93-319 7-235 (275)
256 1wbh_A KHG/KDPG aldolase; lyas 96.8 0.0076 2.6E-07 56.3 11.0 150 157-325 15-193 (214)
257 2czd_A Orotidine 5'-phosphate 96.8 0.025 8.6E-07 52.1 14.2 129 159-324 55-193 (208)
258 1vkf_A Glycerol uptake operon 96.7 0.0033 1.1E-07 57.7 7.5 102 213-323 45-184 (188)
259 2ozt_A TLR1174 protein; struct 96.6 0.035 1.2E-06 55.0 15.1 124 167-315 115-244 (332)
260 3r2g_A Inosine 5'-monophosphat 96.6 0.0027 9.3E-08 64.0 7.0 70 239-316 99-169 (361)
261 3lye_A Oxaloacetate acetyl hyd 96.6 0.042 1.4E-06 54.1 15.2 205 95-320 15-251 (307)
262 1zlp_A PSR132, petal death pro 96.6 0.035 1.2E-06 55.0 14.6 205 96-320 31-261 (318)
263 1mxs_A KDPG aldolase; 2-keto-3 96.6 0.0037 1.3E-07 58.9 7.3 149 158-325 26-203 (225)
264 4h1z_A Enolase Q92ZS5; dehydra 96.6 0.024 8.3E-07 57.8 13.9 124 166-315 186-312 (412)
265 1o66_A 3-methyl-2-oxobutanoate 96.6 0.044 1.5E-06 53.1 14.9 153 110-294 21-204 (275)
266 1oy0_A Ketopantoate hydroxymet 96.6 0.07 2.4E-06 51.9 16.1 152 110-294 38-222 (281)
267 2h6r_A Triosephosphate isomera 96.6 0.004 1.4E-07 58.3 7.2 128 179-328 79-211 (219)
268 1wue_A Mandelate racemase/muco 96.5 0.019 6.4E-07 58.0 12.5 126 162-316 154-282 (386)
269 3qld_A Mandelate racemase/muco 96.5 0.037 1.3E-06 56.0 14.6 130 158-316 138-270 (388)
270 3igs_A N-acetylmannosamine-6-p 96.5 0.014 4.8E-07 55.1 10.4 104 211-329 5-121 (232)
271 1qap_A Quinolinic acid phospho 96.5 0.013 4.4E-07 57.5 10.3 90 214-324 196-288 (296)
272 1vc4_A Indole-3-glycerol phosp 96.4 0.016 5.3E-07 55.6 10.7 82 239-329 65-146 (254)
273 3vdg_A Probable glucarate dehy 96.4 0.026 8.9E-07 58.4 13.1 122 167-316 192-316 (445)
274 3exr_A RMPD (hexulose-6-phosph 96.4 0.012 4.1E-07 55.1 9.6 141 157-324 58-204 (221)
275 3va8_A Probable dehydratase; e 96.4 0.022 7.4E-07 59.0 12.3 122 167-316 190-314 (445)
276 4e38_A Keto-hydroxyglutarate-a 96.4 0.0072 2.5E-07 57.3 7.8 148 158-326 34-211 (232)
277 3e96_A Dihydrodipicolinate syn 96.4 0.018 6.3E-07 56.8 11.1 131 168-313 31-166 (316)
278 4h83_A Mandelate racemase/muco 96.3 0.022 7.7E-07 57.6 11.5 125 167-315 163-290 (388)
279 2vc6_A MOSA, dihydrodipicolina 96.3 0.047 1.6E-06 53.1 13.3 132 168-313 19-160 (292)
280 3q58_A N-acetylmannosamine-6-p 96.3 0.1 3.5E-06 49.1 15.0 115 169-315 35-155 (229)
281 1vs1_A 3-deoxy-7-phosphoheptul 96.2 0.04 1.4E-06 53.5 12.4 110 202-318 127-244 (276)
282 3lab_A Putative KDPG (2-keto-3 96.2 0.018 6E-07 54.1 9.5 91 226-330 13-103 (217)
283 3fa4_A 2,3-dimethylmalate lyas 96.2 0.11 3.7E-06 51.1 15.4 206 94-319 7-242 (302)
284 1nsj_A PRAI, phosphoribosyl an 96.2 0.18 6.2E-06 46.6 16.2 178 111-323 7-187 (205)
285 1vr6_A Phospho-2-dehydro-3-deo 96.2 0.041 1.4E-06 55.2 12.4 110 202-318 195-312 (350)
286 3vc5_A Mandelate racemase/muco 96.2 0.043 1.5E-06 56.6 13.0 122 167-316 187-311 (441)
287 1m3u_A 3-methyl-2-oxobutanoate 96.2 0.04 1.4E-06 53.1 11.7 153 110-294 21-204 (264)
288 1zco_A 2-dehydro-3-deoxyphosph 96.1 0.03 1E-06 53.9 10.9 110 202-318 112-229 (262)
289 1xky_A Dihydrodipicolinate syn 96.1 0.086 2.9E-06 51.6 14.2 133 168-314 31-172 (301)
290 3d0c_A Dihydrodipicolinate syn 96.1 0.034 1.2E-06 54.8 11.4 131 168-313 31-166 (314)
291 3lab_A Putative KDPG (2-keto-3 96.1 0.013 4.6E-07 54.9 7.9 152 156-326 11-196 (217)
292 2yxg_A DHDPS, dihydrodipicolin 96.1 0.1 3.6E-06 50.6 14.6 132 168-313 19-160 (289)
293 1o5k_A DHDPS, dihydrodipicolin 96.1 0.1 3.5E-06 51.2 14.4 133 168-314 31-173 (306)
294 4h2h_A Mandelate racemase/muco 96.1 0.085 2.9E-06 53.0 14.2 131 157-315 139-273 (376)
295 3na8_A Putative dihydrodipicol 96.1 0.085 2.9E-06 52.0 13.9 132 168-314 43-185 (315)
296 2rfg_A Dihydrodipicolinate syn 96.1 0.071 2.4E-06 52.1 13.2 132 168-313 19-159 (297)
297 3l21_A DHDPS, dihydrodipicolin 96.0 0.094 3.2E-06 51.4 14.1 135 168-316 34-177 (304)
298 2b7n_A Probable nicotinate-nuc 96.0 0.013 4.6E-07 56.7 7.9 91 214-325 169-266 (273)
299 1gox_A (S)-2-hydroxy-acid oxid 96.0 0.067 2.3E-06 53.8 13.2 94 221-316 118-253 (370)
300 4fo4_A Inosine 5'-monophosphat 96.0 0.027 9.1E-07 56.9 10.2 97 209-316 80-177 (366)
301 2r8w_A AGR_C_1641P; APC7498, d 96.0 0.084 2.9E-06 52.4 13.7 133 168-314 53-194 (332)
302 3nl6_A Thiamine biosynthetic b 96.0 0.011 3.6E-07 62.8 7.5 81 245-326 121-219 (540)
303 1o60_A 2-dehydro-3-deoxyphosph 96.0 0.053 1.8E-06 53.0 11.9 109 202-318 114-241 (292)
304 2ehh_A DHDPS, dihydrodipicolin 96.0 0.13 4.5E-06 50.0 14.8 132 168-313 19-160 (294)
305 3cyj_A Mandelate racemase/muco 96.0 0.18 6.3E-06 50.4 16.3 120 168-315 144-269 (372)
306 4e38_A Keto-hydroxyglutarate-a 95.9 0.056 1.9E-06 51.1 11.4 99 215-330 26-124 (232)
307 2wkj_A N-acetylneuraminate lya 95.9 0.12 4E-06 50.7 13.9 132 168-314 30-172 (303)
308 3ijl_A Muconate cycloisomerase 95.8 0.063 2.2E-06 53.2 12.0 122 163-314 129-251 (338)
309 2qiw_A PEP phosphonomutase; st 95.8 0.065 2.2E-06 51.4 11.5 183 110-318 24-238 (255)
310 3sr7_A Isopentenyl-diphosphate 95.8 0.022 7.5E-07 57.5 8.6 87 225-316 144-237 (365)
311 2v9d_A YAGE; dihydrodipicolini 95.8 0.14 4.7E-06 51.1 14.3 132 168-313 50-191 (343)
312 3nvt_A 3-deoxy-D-arabino-heptu 95.8 0.055 1.9E-06 55.0 11.5 108 203-317 232-347 (385)
313 3vav_A 3-methyl-2-oxobutanoate 95.8 0.64 2.2E-05 45.0 18.4 177 77-294 9-216 (275)
314 3b4u_A Dihydrodipicolinate syn 95.8 0.21 7.1E-06 48.6 15.3 134 168-314 22-169 (294)
315 3tsm_A IGPS, indole-3-glycerol 95.8 0.03 1E-06 54.2 9.1 76 239-321 79-154 (272)
316 1vqt_A Orotidine 5'-phosphate 95.8 0.083 2.8E-06 49.1 11.8 130 157-325 58-201 (213)
317 3flu_A DHDPS, dihydrodipicolin 95.7 0.14 4.7E-06 49.9 13.8 131 168-313 26-166 (297)
318 3fkr_A L-2-keto-3-deoxyarabona 95.7 0.2 6.8E-06 49.1 15.0 136 168-314 27-171 (309)
319 3sz8_A 2-dehydro-3-deoxyphosph 95.7 0.095 3.3E-06 51.0 12.3 108 202-317 116-242 (285)
320 3cpr_A Dihydrodipicolinate syn 95.7 0.14 4.7E-06 50.2 13.6 132 168-313 35-175 (304)
321 1f6k_A N-acetylneuraminate lya 95.7 0.15 5E-06 49.6 13.7 132 168-313 22-163 (293)
322 2opj_A O-succinylbenzoate-COA 95.7 0.046 1.6E-06 54.1 10.2 129 161-316 73-203 (327)
323 3si9_A DHDPS, dihydrodipicolin 95.7 0.15 5.3E-06 50.1 13.9 132 168-314 41-183 (315)
324 1eix_A Orotidine 5'-monophosph 95.7 0.13 4.4E-06 48.7 12.9 145 158-324 15-229 (245)
325 3m5v_A DHDPS, dihydrodipicolin 95.6 0.19 6.5E-06 49.1 14.3 134 168-316 26-171 (301)
326 2qkf_A 3-deoxy-D-manno-octulos 95.6 0.056 1.9E-06 52.5 10.4 110 202-319 111-239 (280)
327 3qze_A DHDPS, dihydrodipicolin 95.6 0.15 5.2E-06 50.1 13.7 132 168-314 42-183 (314)
328 3p0w_A Mandelate racemase/muco 95.6 0.11 3.6E-06 54.2 12.8 124 166-315 198-328 (470)
329 3daq_A DHDPS, dihydrodipicolin 95.5 0.18 6.3E-06 48.9 13.7 132 168-313 21-161 (292)
330 3fs2_A 2-dehydro-3-deoxyphosph 95.5 0.084 2.9E-06 51.7 11.1 107 202-317 137-261 (298)
331 2ojp_A DHDPS, dihydrodipicolin 95.5 0.12 4.2E-06 50.1 12.4 126 168-307 20-154 (292)
332 3f4w_A Putative hexulose 6 pho 95.5 0.21 7.2E-06 45.4 13.3 129 160-317 3-135 (211)
333 1p0k_A Isopentenyl-diphosphate 95.5 0.08 2.8E-06 52.6 11.2 90 223-316 114-209 (349)
334 3mzn_A Glucarate dehydratase; 95.5 0.17 5.9E-06 52.2 14.0 124 166-315 180-310 (450)
335 4adt_A Pyridoxine biosynthetic 95.5 0.031 1.1E-06 54.8 7.9 88 242-331 31-121 (297)
336 3s5o_A 4-hydroxy-2-oxoglutarat 95.4 0.34 1.2E-05 47.4 15.2 133 168-314 33-176 (307)
337 3a5f_A Dihydrodipicolinate syn 95.4 0.097 3.3E-06 50.9 11.1 126 168-307 20-154 (291)
338 3tak_A DHDPS, dihydrodipicolin 95.4 0.18 6.2E-06 48.9 13.1 132 168-314 20-161 (291)
339 3qja_A IGPS, indole-3-glycerol 95.4 0.037 1.2E-06 53.6 8.0 79 239-324 72-150 (272)
340 1x1o_A Nicotinate-nucleotide p 95.4 0.08 2.7E-06 51.6 10.4 90 215-325 184-277 (286)
341 1v5x_A PRA isomerase, phosphor 95.3 0.66 2.3E-05 42.8 16.1 173 111-323 6-181 (203)
342 3ffs_A Inosine-5-monophosphate 95.3 0.046 1.6E-06 55.8 8.8 67 242-316 146-212 (400)
343 3h5d_A DHDPS, dihydrodipicolin 95.3 0.2 6.7E-06 49.2 13.0 130 168-312 26-166 (311)
344 2gjl_A Hypothetical protein PA 95.2 0.11 3.7E-06 51.1 11.1 95 208-317 50-147 (328)
345 2jbm_A Nicotinate-nucleotide p 95.2 0.023 8E-07 55.7 6.1 90 215-325 185-281 (299)
346 3sgz_A Hydroxyacid oxidase 2; 95.2 0.039 1.3E-06 55.4 7.9 43 272-316 203-245 (352)
347 3dz1_A Dihydrodipicolinate syn 95.2 0.34 1.2E-05 47.6 14.5 131 168-314 27-169 (313)
348 3jr2_A Hexulose-6-phosphate sy 95.2 0.21 7.3E-06 46.1 12.4 130 158-317 7-140 (218)
349 3o1n_A 3-dehydroquinate dehydr 95.2 1.2 3.9E-05 43.1 17.9 138 157-316 38-196 (276)
350 3ajx_A 3-hexulose-6-phosphate 95.1 0.26 8.9E-06 44.6 12.7 128 160-316 3-134 (207)
351 3fok_A Uncharacterized protein 95.1 0.12 4.2E-06 50.7 10.7 116 180-321 139-278 (307)
352 3v5c_A Mandelate racemase/muco 95.1 0.083 2.8E-06 53.6 10.0 128 169-315 149-284 (392)
353 3eb2_A Putative dihydrodipicol 95.0 0.11 3.8E-06 50.7 10.4 125 168-306 23-156 (300)
354 1y0e_A Putative N-acetylmannos 95.0 0.076 2.6E-06 48.8 8.8 84 225-323 6-102 (223)
355 2yci_X 5-methyltetrahydrofolat 95.0 0.21 7.2E-06 48.2 12.1 108 169-305 33-149 (271)
356 3bo9_A Putative nitroalkan dio 95.0 0.12 4.1E-06 51.0 10.6 90 209-315 61-150 (326)
357 1zfj_A Inosine monophosphate d 95.0 0.034 1.2E-06 57.8 6.9 71 240-318 233-304 (491)
358 3iv3_A Tagatose 1,6-diphosphat 95.0 0.25 8.5E-06 49.1 12.7 134 177-322 118-286 (332)
359 3vav_A 3-methyl-2-oxobutanoate 94.9 0.6 2.1E-05 45.2 15.0 117 157-292 28-148 (275)
360 3tml_A 2-dehydro-3-deoxyphosph 94.9 0.15 5.3E-06 49.6 10.9 106 202-317 113-243 (288)
361 3qfe_A Putative dihydrodipicol 94.9 0.51 1.7E-05 46.4 14.7 134 168-314 30-175 (318)
362 1jcn_A Inosine monophosphate d 94.9 0.045 1.5E-06 57.3 7.5 70 240-317 255-325 (514)
363 1h1y_A D-ribulose-5-phosphate 94.8 0.078 2.7E-06 49.4 8.3 136 158-317 7-146 (228)
364 1o66_A 3-methyl-2-oxobutanoate 94.8 0.23 7.7E-06 48.1 11.5 115 158-291 17-136 (275)
365 4fxs_A Inosine-5'-monophosphat 94.7 0.041 1.4E-06 57.7 6.7 70 239-316 230-300 (496)
366 2okt_A OSB synthetase, O-succi 94.7 0.23 7.9E-06 49.1 11.9 123 159-316 121-244 (342)
367 3eoo_A Methylisocitrate lyase; 94.6 0.25 8.6E-06 48.4 11.7 162 158-330 22-203 (298)
368 1rpx_A Protein (ribulose-phosp 94.6 0.087 3E-06 48.9 8.1 128 160-314 13-145 (230)
369 2nli_A Lactate oxidase; flavoe 94.6 0.21 7.1E-06 50.3 11.3 90 225-316 132-257 (368)
370 4dbe_A Orotidine 5'-phosphate 94.6 0.29 9.8E-06 45.8 11.6 140 157-326 52-197 (222)
371 3pfr_A Mandelate racemase/muco 94.6 0.29 1E-05 50.6 12.6 123 167-315 184-313 (455)
372 2v82_A 2-dehydro-3-deoxy-6-pho 94.5 0.11 3.8E-06 47.5 8.5 82 225-317 6-88 (212)
373 2nwr_A 2-dehydro-3-deoxyphosph 94.5 0.18 6.2E-06 48.6 10.2 107 202-318 100-224 (267)
374 1ep3_A Dihydroorotate dehydrog 94.5 0.14 4.7E-06 49.5 9.6 167 102-315 17-195 (311)
375 1kbi_A Cytochrome B2, L-LCR; f 94.5 0.24 8.2E-06 52.0 12.0 90 225-316 246-371 (511)
376 4g8t_A Glucarate dehydratase; 94.5 0.36 1.2E-05 50.0 13.1 125 168-315 202-330 (464)
377 4aaj_A N-(5'-phosphoribosyl)an 94.5 1.6 5.4E-05 40.9 16.4 131 158-320 71-206 (228)
378 1m3u_A 3-methyl-2-oxobutanoate 94.5 0.44 1.5E-05 45.8 12.7 139 158-315 17-180 (264)
379 3ih1_A Methylisocitrate lyase; 94.5 0.25 8.6E-06 48.5 11.3 161 157-330 28-207 (305)
380 2wqp_A Polysialic acid capsule 94.5 0.29 9.9E-06 49.0 11.9 101 202-311 130-231 (349)
381 2nuw_A 2-keto-3-deoxygluconate 94.3 0.44 1.5E-05 46.1 12.7 122 168-304 18-147 (288)
382 3c2e_A Nicotinate-nucleotide p 94.3 0.024 8.2E-07 55.5 3.5 91 214-325 186-286 (294)
383 2r91_A 2-keto-3-deoxy-(6-phosp 94.3 0.44 1.5E-05 46.0 12.5 121 168-303 17-145 (286)
384 3iwp_A Copper homeostasis prot 94.2 0.7 2.4E-05 44.9 13.7 136 159-316 39-186 (287)
385 1yxy_A Putative N-acetylmannos 94.2 0.14 5E-06 47.4 8.7 93 214-323 8-115 (234)
386 4h3d_A 3-dehydroquinate dehydr 94.2 2.6 9E-05 40.0 17.6 94 156-260 17-121 (258)
387 2hmc_A AGR_L_411P, dihydrodipi 94.2 0.7 2.4E-05 46.0 14.0 137 168-318 45-189 (344)
388 1vrd_A Inosine-5'-monophosphat 94.1 0.085 2.9E-06 54.9 7.5 71 239-317 236-307 (494)
389 3vnd_A TSA, tryptophan synthas 94.1 0.3 1E-05 47.1 10.7 111 212-322 4-136 (267)
390 1o4u_A Type II quinolic acid p 94.1 0.057 1.9E-06 52.7 5.7 91 214-325 180-277 (285)
391 1w3i_A EDA, 2-keto-3-deoxy glu 94.0 0.54 1.8E-05 45.6 12.6 121 168-303 18-146 (293)
392 3vkj_A Isopentenyl-diphosphate 94.0 0.14 4.7E-06 51.7 8.5 104 206-315 100-217 (368)
393 2z6i_A Trans-2-enoyl-ACP reduc 94.0 0.26 8.9E-06 48.6 10.3 92 209-317 47-139 (332)
394 2zbt_A Pyridoxal biosynthesis 93.9 0.15 5.1E-06 49.3 8.4 98 224-330 20-120 (297)
395 4af0_A Inosine-5'-monophosphat 93.9 0.098 3.4E-06 55.1 7.3 72 239-318 280-352 (556)
396 3ru6_A Orotidine 5'-phosphate 93.9 1.3 4.5E-05 43.3 15.0 186 102-327 24-241 (303)
397 1f6y_A 5-methyltetrahydrofolat 93.9 0.45 1.5E-05 45.6 11.5 95 168-291 23-121 (262)
398 1eep_A Inosine 5'-monophosphat 93.9 0.091 3.1E-06 53.3 6.9 69 240-316 153-222 (404)
399 3ekg_A Mandelate racemase/muco 93.8 0.35 1.2E-05 49.2 11.3 117 179-315 171-292 (404)
400 3iwp_A Copper homeostasis prot 93.8 0.82 2.8E-05 44.4 13.1 127 167-315 105-237 (287)
401 1wa3_A 2-keto-3-deoxy-6-phosph 93.7 0.21 7.2E-06 45.2 8.6 81 226-318 10-91 (205)
402 1jub_A Dihydroorotate dehydrog 93.7 0.6 2.1E-05 45.2 12.4 90 225-316 93-192 (311)
403 3nav_A Tryptophan synthase alp 93.7 0.41 1.4E-05 46.2 10.9 106 212-317 6-133 (271)
404 1oy0_A Ketopantoate hydroxymet 93.7 0.6 2.1E-05 45.3 12.0 112 161-290 36-153 (281)
405 1vhc_A Putative KHG/KDPG aldol 93.6 0.51 1.7E-05 44.1 11.2 89 227-329 18-106 (224)
406 2hjp_A Phosphonopyruvate hydro 93.6 1.1 3.9E-05 43.5 14.0 161 161-330 17-199 (290)
407 3bw2_A 2-nitropropane dioxygen 93.6 0.56 1.9E-05 46.8 12.2 96 208-317 45-174 (369)
408 1dbt_A Orotidine 5'-phosphate 93.6 1.6 5.3E-05 40.9 14.5 130 162-324 61-222 (239)
409 1p4c_A L(+)-mandelate dehydrog 93.5 0.59 2E-05 47.1 12.2 43 272-316 211-253 (380)
410 1hg3_A Triosephosphate isomera 93.3 0.29 9.9E-06 46.0 8.9 81 247-328 132-217 (225)
411 2ze3_A DFA0005; organic waste 93.3 0.53 1.8E-05 45.5 10.9 157 161-330 18-200 (275)
412 1wbh_A KHG/KDPG aldolase; lyas 93.3 0.69 2.4E-05 42.9 11.3 87 227-327 17-103 (214)
413 1vli_A Spore coat polysacchari 93.2 0.47 1.6E-05 48.1 10.8 101 202-311 140-243 (385)
414 2yyu_A Orotidine 5'-phosphate 93.1 1.4 4.9E-05 41.4 13.6 130 162-324 62-223 (246)
415 1w0m_A TIM, triosephosphate is 93.0 0.32 1.1E-05 45.8 8.6 126 180-327 83-213 (226)
416 1gte_A Dihydropyrimidine dehyd 93.0 0.81 2.8E-05 51.9 13.5 99 217-315 625-734 (1025)
417 1xg4_A Probable methylisocitra 92.8 0.85 2.9E-05 44.5 11.7 163 158-330 17-199 (295)
418 2p3z_A L-rhamnonate dehydratas 92.8 0.61 2.1E-05 47.6 11.2 95 210-315 205-303 (415)
419 3m47_A Orotidine 5'-phosphate 92.8 1.2 4.2E-05 41.5 12.4 137 157-325 64-211 (228)
420 2fym_A Enolase; RNA degradosom 92.7 0.28 9.4E-06 50.3 8.4 72 234-315 265-340 (431)
421 3q94_A Fructose-bisphosphate a 92.7 2.2 7.4E-05 41.5 14.3 109 209-319 119-239 (288)
422 1kko_A 3-methylaspartate ammon 92.6 0.61 2.1E-05 47.4 10.8 99 213-316 218-331 (413)
423 2nzl_A Hydroxyacid oxidase 1; 92.6 0.53 1.8E-05 47.7 10.3 90 225-316 146-280 (392)
424 1mxs_A KDPG aldolase; 2-keto-3 92.5 0.82 2.8E-05 42.7 10.8 98 213-327 16-113 (225)
425 3k13_A 5-methyltetrahydrofolat 92.4 0.51 1.7E-05 46.2 9.5 53 168-232 35-91 (300)
426 2ekc_A AQ_1548, tryptophan syn 92.3 0.72 2.5E-05 43.9 10.3 99 213-316 4-129 (262)
427 2c6q_A GMP reductase 2; TIM ba 92.2 0.24 8.1E-06 49.5 7.1 79 227-316 108-189 (351)
428 2vef_A Dihydropteroate synthas 92.1 0.45 1.5E-05 46.9 8.8 100 168-292 31-135 (314)
429 1ydn_A Hydroxymethylglutaryl-C 92.1 4.8 0.00016 38.6 16.1 143 162-316 75-231 (295)
430 1jpd_X L-Ala-D/L-Glu epimerase 92.1 0.37 1.3E-05 47.2 8.2 121 163-315 127-249 (324)
431 1qop_A Tryptophan synthase alp 92.1 0.6 2.1E-05 44.5 9.5 105 213-320 4-133 (268)
432 3tfx_A Orotidine 5'-phosphate 92.1 3.9 0.00013 39.1 15.1 138 157-326 56-226 (259)
433 3tqp_A Enolase; energy metabol 92.0 0.79 2.7E-05 47.0 10.8 99 208-316 216-337 (428)
434 1tx2_A DHPS, dihydropteroate s 92.0 1.2 4.1E-05 43.5 11.7 74 169-256 62-139 (297)
435 2e6f_A Dihydroorotate dehydrog 91.8 1.1 3.6E-05 43.5 11.1 91 224-316 92-195 (314)
436 2nv1_A Pyridoxal biosynthesis 91.7 0.5 1.7E-05 45.9 8.5 80 240-321 29-111 (305)
437 3fxg_A Rhamnonate dehydratase; 91.6 0.53 1.8E-05 48.7 9.0 118 179-315 177-297 (455)
438 1qpo_A Quinolinate acid phosph 91.5 0.54 1.8E-05 45.7 8.5 94 214-324 182-277 (284)
439 3usb_A Inosine-5'-monophosphat 91.4 0.55 1.9E-05 49.2 9.0 71 239-317 255-326 (511)
440 2pcq_A Putative dihydrodipicol 91.3 1.4 4.7E-05 42.5 11.2 128 168-313 17-151 (283)
441 3ve9_A Orotidine-5'-phosphate 91.1 0.38 1.3E-05 44.8 6.7 137 157-327 50-191 (215)
442 1twd_A Copper homeostasis prot 91.1 1.5 5.1E-05 41.9 10.9 132 162-315 4-147 (256)
443 1eye_A DHPS 1, dihydropteroate 91.0 0.97 3.3E-05 43.8 9.7 81 168-260 27-109 (280)
444 3g8r_A Probable spore coat pol 90.8 1.4 4.9E-05 44.0 10.9 82 203-292 118-200 (350)
445 2q02_A Putative cytoplasmic pr 90.8 3.9 0.00013 37.6 13.5 141 160-313 9-165 (272)
446 2ftp_A Hydroxymethylglutaryl-C 90.7 1.8 6.1E-05 42.0 11.4 140 167-318 84-237 (302)
447 1geq_A Tryptophan synthase alp 90.7 0.43 1.5E-05 44.5 6.8 86 236-323 16-122 (248)
448 3cpr_A Dihydrodipicolinate syn 90.7 0.68 2.3E-05 45.2 8.3 88 236-324 34-126 (304)
449 2bdq_A Copper homeostasis prot 90.6 4.5 0.00015 37.8 13.5 139 157-315 54-206 (224)
450 3tr9_A Dihydropteroate synthas 90.6 0.53 1.8E-05 46.4 7.5 82 168-256 47-129 (314)
451 1lt8_A Betaine-homocysteine me 90.6 2.9 0.0001 42.5 13.2 90 124-234 150-250 (406)
452 1sfl_A 3-dehydroquinate dehydr 90.5 10 0.00036 35.3 16.2 137 159-316 5-162 (238)
453 3l21_A DHDPS, dihydrodipicolin 90.5 0.57 2E-05 45.7 7.7 88 236-324 33-125 (304)
454 2qiw_A PEP phosphonomutase; st 90.5 1 3.5E-05 43.0 9.3 159 157-330 19-200 (255)
455 3daq_A DHDPS, dihydrodipicolin 90.5 0.57 1.9E-05 45.4 7.5 87 237-324 21-112 (292)
456 3paj_A Nicotinate-nucleotide p 90.4 1.1 3.7E-05 44.3 9.5 95 204-319 204-306 (320)
457 3flu_A DHDPS, dihydrodipicolin 90.3 0.63 2.2E-05 45.2 7.8 87 237-324 26-117 (297)
458 1xky_A Dihydrodipicolinate syn 90.2 0.64 2.2E-05 45.3 7.7 86 237-324 31-122 (301)
459 1zlp_A PSR132, petal death pro 90.2 2.7 9.2E-05 41.4 12.2 163 158-330 39-221 (318)
460 3tak_A DHDPS, dihydrodipicolin 90.2 0.62 2.1E-05 45.1 7.6 87 237-324 20-111 (291)
461 1kcz_A Beta-methylaspartase; b 90.2 1.4 4.8E-05 44.6 10.6 97 213-316 218-331 (413)
462 1rd5_A Tryptophan synthase alp 90.2 0.91 3.1E-05 42.9 8.6 102 213-316 5-125 (262)
463 1qwg_A PSL synthase;, (2R)-pho 90.2 6.5 0.00022 37.4 14.3 130 166-315 22-167 (251)
464 3tqv_A Nicotinate-nucleotide p 90.2 0.75 2.6E-05 44.7 8.0 90 214-324 186-278 (287)
465 3qze_A DHDPS, dihydrodipicolin 90.1 0.57 1.9E-05 46.0 7.3 87 237-324 42-133 (314)
466 1r6w_A OSB synthase, O-succiny 90.1 0.35 1.2E-05 47.4 5.7 120 166-315 113-236 (322)
467 1q7z_A 5-methyltetrahydrofolat 90.0 1.8 6E-05 46.0 11.5 63 175-256 346-410 (566)
468 4dpp_A DHDPS 2, dihydrodipicol 90.0 2.6 8.9E-05 42.2 12.1 130 168-313 78-216 (360)
469 2ojp_A DHDPS, dihydrodipicolin 90.0 0.66 2.2E-05 44.9 7.5 87 237-324 20-111 (292)
470 2czd_A Orotidine 5'-phosphate 89.9 2.6 8.9E-05 38.3 11.2 118 168-316 10-139 (208)
471 2wkj_A N-acetylneuraminate lya 89.9 0.69 2.4E-05 45.1 7.6 86 237-324 30-121 (303)
472 2h9a_B CO dehydrogenase/acetyl 89.8 1.6 5.6E-05 42.8 10.3 105 177-305 82-191 (310)
473 1w6t_A Enolase; bacterial infe 89.8 1.4 5E-05 45.1 10.3 71 236-316 279-353 (444)
474 1f6k_A N-acetylneuraminate lya 89.7 0.69 2.3E-05 44.8 7.4 87 237-324 22-114 (293)
475 1s2w_A Phosphoenolpyruvate pho 89.6 2.4 8.4E-05 41.2 11.3 97 157-262 18-117 (295)
476 3a5f_A Dihydrodipicolinate syn 89.6 0.69 2.4E-05 44.7 7.4 88 236-324 19-111 (291)
477 3si9_A DHDPS, dihydrodipicolin 89.6 0.58 2E-05 46.0 6.9 87 237-324 41-132 (315)
478 3b4u_A Dihydrodipicolinate syn 89.6 0.67 2.3E-05 44.9 7.3 86 237-324 22-114 (294)
479 2ehh_A DHDPS, dihydrodipicolin 89.6 0.71 2.4E-05 44.7 7.4 88 236-324 18-110 (294)
480 2yxg_A DHDPS, dihydrodipicolin 89.6 0.76 2.6E-05 44.4 7.6 87 236-324 18-110 (289)
481 3lg3_A Isocitrate lyase; conse 89.6 12 0.0004 38.4 16.6 152 158-321 153-357 (435)
482 3noy_A 4-hydroxy-3-methylbut-2 89.5 1.7 5.9E-05 43.4 10.1 116 237-364 44-176 (366)
483 1o5k_A DHDPS, dihydrodipicolin 89.3 0.75 2.6E-05 44.9 7.4 88 236-324 30-122 (306)
484 2v9d_A YAGE; dihydrodipicolini 89.3 0.74 2.5E-05 45.8 7.4 87 237-324 50-141 (343)
485 4hb7_A Dihydropteroate synthas 89.2 2.3 7.8E-05 41.0 10.5 97 169-291 29-130 (270)
486 4ef8_A Dihydroorotate dehydrog 89.2 3.8 0.00013 40.9 12.6 167 102-315 47-227 (354)
487 2r8w_A AGR_C_1641P; APC7498, d 89.1 0.71 2.4E-05 45.7 7.1 86 237-324 53-144 (332)
488 3p6l_A Sugar phosphate isomera 89.1 5.1 0.00018 36.8 12.8 135 158-307 10-154 (262)
489 2rfg_A Dihydrodipicolinate syn 89.1 0.68 2.3E-05 45.0 6.9 86 237-324 19-110 (297)
490 3m5v_A DHDPS, dihydrodipicolin 89.1 0.81 2.8E-05 44.5 7.4 88 236-324 25-118 (301)
491 3gnn_A Nicotinate-nucleotide p 89.1 0.81 2.8E-05 44.8 7.3 90 214-324 197-289 (298)
492 3noy_A 4-hydroxy-3-methylbut-2 88.9 2.4 8.1E-05 42.4 10.7 82 156-261 28-114 (366)
493 3na8_A Putative dihydrodipicol 88.9 0.62 2.1E-05 45.7 6.5 87 237-324 43-134 (315)
494 2dqw_A Dihydropteroate synthas 88.8 1.3 4.5E-05 43.2 8.7 71 174-256 57-127 (294)
495 2fli_A Ribulose-phosphate 3-ep 88.8 0.85 2.9E-05 41.5 7.0 83 237-322 14-97 (220)
496 2bdq_A Copper homeostasis prot 88.6 3.5 0.00012 38.6 11.1 119 180-314 19-151 (224)
497 3m47_A Orotidine 5'-phosphate 88.6 7.5 0.00026 36.1 13.5 87 157-262 12-101 (228)
498 1twd_A Copper homeostasis prot 88.6 6.6 0.00023 37.4 13.1 137 157-316 51-198 (256)
499 3tr2_A Orotidine 5'-phosphate 88.4 8.6 0.00029 36.1 13.8 124 169-324 72-224 (239)
500 2vc6_A MOSA, dihydrodipicolina 88.3 0.71 2.4E-05 44.7 6.4 86 237-324 19-110 (292)
No 1
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=5e-53 Score=428.25 Aligned_cols=300 Identities=24% Similarity=0.341 Sum_probs=257.3
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHc
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~ 180 (436)
++|+++|||+|+||.+||.+|+++|+ +++||||+++..+..+... .....++.+.|+++||+|++++++++||++++
T Consensus 3 ~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~--~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a~ 80 (350)
T 3b0p_A 3 DPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARIGE 80 (350)
T ss_dssp CCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH--HHHCCCGGGCSEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHH--HHhccCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 57999999999999999999999997 9999999998876443332 22345678899999999999999999998875
Q ss_pred -CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCCh----hhHHHHHHHHHHcCccE
Q 013813 181 -PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL----QDTIKYAKMLEDAGCSL 255 (436)
Q Consensus 181 -~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~----~d~~~~ak~le~aG~d~ 255 (436)
.|+|+||||+|||..++++++||++|+++++++.+|++++++.+++||+||+|+|++. +++.++++.++++|+|+
T Consensus 81 ~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~ 160 (350)
T 3b0p_A 81 AFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKV 160 (350)
T ss_dssp HTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred HcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCE
Confidence 4899999999999999999999999999999999999999999999999999998653 36789999999999999
Q ss_pred EEeccCcccccCCC-----CCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhh
Q 013813 256 LAVHGRTRDEKDGK-----KFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 256 I~VHgRt~~~~~~~-----~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
|+||+|+..+.... ..+.+|++++++++.+ ++|||+||||.|++|+.++++ |||+|||||+++.|||+|.++
T Consensus 161 I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~--GaD~V~iGRa~l~~P~l~~~i 238 (350)
T 3b0p_A 161 FVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEA 238 (350)
T ss_dssp EEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT--TSSEEEECHHHHHCGGGGTTH
T ss_pred EEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh--CCCEEEECHHHHhCcHHHHHH
Confidence 99999987531111 1146899999999998 999999999999999999996 899999999999999999999
Q ss_pred hhhhhccCCcccCCCCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHhhhcCCHHHHHHHHhcchhcHHHHHHHHHH
Q 013813 330 RTAEWIVGSEEISKDGNLDQADLLVEYLKLCEKYPVPWRMIRSHVHKLLGEWFRIQPGVREDLNAQNRLTFEFLYNLVDR 409 (436)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~R~hl~~~l~~~~~~~~~~r~~l~~~~~~~~~~~~~~l~~ 409 (436)
....|. ....++..+.++.+.+|++....++..+..+|||+.||++. +++...+|+.|+++. +.+++.+++++
T Consensus 239 ~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~kh~~~~~~g-~~~~~~~r~~l~~~~--~~~~~~~~l~~ 311 (350)
T 3b0p_A 239 DRRVFG----LPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRG-RPKGRLWRRLLSEGR--SLQALDRALRL 311 (350)
T ss_dssp HHHTTC----CSCCCCHHHHHHHHHHHHHHHHHHTCCHHHHHTTSTTTTTT-STTHHHHHHHHHHHC--SHHHHHHHHHH
T ss_pred HHHhcC----CCCCCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHcc-CCCHHHHHHHHHCCC--CHHHHHHHHHH
Confidence 876552 23346777888888898876555666788999999988775 577889999999987 88999999998
Q ss_pred HHH
Q 013813 410 LRE 412 (436)
Q Consensus 410 ~~~ 412 (436)
+..
T Consensus 312 ~~~ 314 (350)
T 3b0p_A 312 MEE 314 (350)
T ss_dssp HHH
T ss_pred Hhh
Confidence 763
No 2
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=6.3e-53 Score=421.97 Aligned_cols=301 Identities=23% Similarity=0.354 Sum_probs=261.0
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcC
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEP 181 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~ 181 (436)
++|+++|||+++||.+||.+|+++|+++++|||+++..+..........+ .++.+.|+++||+|+++++|++||+++++
T Consensus 4 ~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~a~~ 82 (318)
T 1vhn_A 4 EVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILSE 82 (318)
T ss_dssp -CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999876554333323334 67889999999999999999999998865
Q ss_pred CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccC
Q 013813 182 YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGR 261 (436)
Q Consensus 182 g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgR 261 (436)
.||+||||+|||+.++++++||++|+++++++.++++++++.+++||+||+|.|++.++..++++.++++|+|+|+||+|
T Consensus 83 ~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~ 162 (318)
T 1vhn_A 83 KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTR 162 (318)
T ss_dssp TCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESS
T ss_pred hCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCC
Confidence 59999999999999999999999999999999999999999999999999999998777779999999999999999999
Q ss_pred cccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhhhhccCCccc
Q 013813 262 TRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTAEWIVGSEEI 341 (436)
Q Consensus 262 t~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~~~~~~~~~~ 341 (436)
+..+. ++++++|+.++++++ ++|||+||||.|++|+.++++.+|||+|||||+++.|||+|.++.... .+| ..
T Consensus 163 ~~~~~--~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~--~~g-~~ 235 (318)
T 1vhn_A 163 TVVQS--FTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFL--RSG-KY 235 (318)
T ss_dssp CTTTT--TSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHH--HHS-CC
T ss_pred Ccccc--CCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHH--hCC-CC
Confidence 87643 445788999998888 999999999999999999999789999999999999999999987532 223 22
Q ss_pred CCCCHHHHHHHHHHHHHHHHh-CCC--hhHHHHHHHHHHHHhhhcCCHHHHHHHHhcchhcHHHHHHHHHHHHHh
Q 013813 342 SKDGNLDQADLLVEYLKLCEK-YPV--PWRMIRSHVHKLLGEWFRIQPGVREDLNAQNRLTFEFLYNLVDRLREL 413 (436)
Q Consensus 342 ~~~~~~~~~~~~~~yl~~~~~-~~~--~~~~~R~hl~~~l~~~~~~~~~~r~~l~~~~~~~~~~~~~~l~~~~~~ 413 (436)
..++..++++++.+|+++..+ ++. .+..+|+|+.||++. +++...+|+.|++++ +.+++.++++++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~--~~~~~~~~~~~~~~~ 307 (318)
T 1vhn_A 236 SEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTKD-LKGARRFREKVMKIE--EVQILKEMFYNFIKE 307 (318)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHTTT-CTTHHHHHHHHTTCC--CHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhc-CCChHHHHHHHHcCC--CHHHHHHHHHHHHHh
Confidence 336778899999999997654 453 377899999998764 677789999999997 889999999997643
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=5.2e-33 Score=280.13 Aligned_cols=231 Identities=14% Similarity=0.184 Sum_probs=186.9
Q ss_pred CCcEEEccCCCCC---------cHHHHHHHHH--hCCCeEEeCcccch--hhc-------cChhh----hhhhhhccCCC
Q 013813 102 RPKLIVAPMVDNS---------ELPFRMLCRR--YGAEAAYTPMLHSR--IFT-------ESEKY----RNEEFATCKED 157 (436)
Q Consensus 102 ~~~i~lAPM~gvt---------d~~fR~l~~~--~Ga~l~~Temisa~--~l~-------~~~~~----~~~~~~~~~~e 157 (436)
+|++++|||.+++ +..++.+.++ .|+++++||+++.. ... .+... +...-..+..+
T Consensus 17 ~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g 96 (338)
T 1z41_A 17 KNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG 96 (338)
T ss_dssp SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT
T ss_pred cCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 6899999999874 3444444443 48999999998653 211 01111 11111245678
Q ss_pred CCEEEEecCC-----------------------CH------------HHHHHHHHHH-cCCCcEEEEecCC---------
Q 013813 158 RPLFVQFCAN-----------------------DP------------EILLNAARRV-EPYCDYVDINLGC--------- 192 (436)
Q Consensus 158 ~plivQL~g~-----------------------d~------------e~~~~AA~~v-~~g~D~IdLN~GC--------- 192 (436)
.++++||++. .| ++|++||+++ ++|||+||||++|
T Consensus 97 ~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFls 176 (338)
T 1z41_A 97 SKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLS 176 (338)
T ss_dssp CEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHC
T ss_pred CEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccC
Confidence 8999999964 33 7899999766 5699999999987
Q ss_pred CchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc------CCChhhHHHHHHHHHHcCccEEEeccCccccc
Q 013813 193 PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEK 266 (436)
Q Consensus 193 P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~ 266 (436)
|..|.+++.||++++++++++.+|+++|++++++||+||++. |++.+++.++++.++++|+|+|+||+++....
T Consensus 177 p~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~ 256 (338)
T 1z41_A 177 PLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHA 256 (338)
T ss_dssp TTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCC
T ss_pred CCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccC
Confidence 999999999999999999999999999999999999999998 56778899999999999999999999875321
Q ss_pred CCCCC-ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 267 DGKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 267 ~~~~g-~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
....+ ..+++.++++++.+++||+++|||.|+++++++++.++||+|++||+++.||+|+.++..+
T Consensus 257 ~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~ 323 (338)
T 1z41_A 257 DINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQ 323 (338)
T ss_dssp CCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcC
Confidence 11112 2478999999999999999999999999999999986699999999999999999998754
No 4
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=6.8e-33 Score=283.17 Aligned_cols=227 Identities=16% Similarity=0.162 Sum_probs=187.4
Q ss_pred CCcEEEccCCCC-------CcHHHHHHHHHhCCCeEEeCcccch--hhc-------cChhh----hhhhhhccCCCCCEE
Q 013813 102 RPKLIVAPMVDN-------SELPFRMLCRRYGAEAAYTPMLHSR--IFT-------ESEKY----RNEEFATCKEDRPLF 161 (436)
Q Consensus 102 ~~~i~lAPM~gv-------td~~fR~l~~~~Ga~l~~Temisa~--~l~-------~~~~~----~~~~~~~~~~e~pli 161 (436)
+|+|++|||.+. |+..+|.++++.|+++++||+++.. ... .+.+. +...-..+..+.+++
T Consensus 23 ~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~i~ 102 (377)
T 2r14_A 23 PNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIA 102 (377)
T ss_dssp SCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred cCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHHHhhcCCeEE
Confidence 689999999987 9999999999999999999998753 211 01111 111112467788999
Q ss_pred EEecCC-------------------------------------------CH------------HHHHHHHHHH-cCCCcE
Q 013813 162 VQFCAN-------------------------------------------DP------------EILLNAARRV-EPYCDY 185 (436)
Q Consensus 162 vQL~g~-------------------------------------------d~------------e~~~~AA~~v-~~g~D~ 185 (436)
+||++. .| ++|++||+++ +.|||+
T Consensus 103 ~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDg 182 (377)
T 2r14_A 103 LQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAKRAGFDM 182 (377)
T ss_dssp EEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHHHHTCSE
T ss_pred EEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 999851 23 7999999876 469999
Q ss_pred EEEecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccC---------CChhhHHHHHH
Q 013813 186 VDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVF---------PNLQDTIKYAK 246 (436)
Q Consensus 186 IdLN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg---------~~~~d~~~~ak 246 (436)
||||++| |..|.+.+.||++++++++++.+|+++|+++++. ||+||++.. ++.+++.++++
T Consensus 183 VEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~ 262 (377)
T 2r14_A 183 VEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAG 262 (377)
T ss_dssp EEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHH
T ss_pred EEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHH
Confidence 9999997 9999999999999999999999999999999853 999999874 23467889999
Q ss_pred HHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 247 MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 247 ~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
.++++|+|+|+||+++..+.. .+ .+|++++.+++.+++|||+|||| ++++++++++.++||+||+||+++.||||+
T Consensus 263 ~le~~Gvd~i~v~~~~~~~~~--~~-~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~P~l~ 338 (377)
T 2r14_A 263 ELDRRGLAYLHFNEPDWIGGD--IT-YPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIANPDLP 338 (377)
T ss_dssp HHHHTTCSEEEEECCC--------C-CCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred HHHHcCCCEEEEeCCcccCCC--Cc-chHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhCchHH
Confidence 999999999999998754321 11 26888999999999999999999 699999999997799999999999999999
Q ss_pred hhhhhh
Q 013813 327 AGFRTA 332 (436)
Q Consensus 327 ~~i~~~ 332 (436)
.+++.+
T Consensus 339 ~k~~~g 344 (377)
T 2r14_A 339 ERFRLG 344 (377)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 998754
No 5
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.98 E-value=5.5e-32 Score=275.31 Aligned_cols=226 Identities=15% Similarity=0.180 Sum_probs=187.6
Q ss_pred CCcEEEccCCCC---------CcHHHHHHHHHhCCCeEEeCcccch--hhc-------cChhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVDN---------SELPFRMLCRRYGAEAAYTPMLHSR--IFT-------ESEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~gv---------td~~fR~l~~~~Ga~l~~Temisa~--~l~-------~~~~~----~~~~~~~~~~e~p 159 (436)
+|++++|||.++ |+..+|.++++.|+++++||+++.. ... .+.+. +...-..+..+.+
T Consensus 17 ~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~~g~~ 96 (364)
T 1vyr_A 17 PNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHAEDGR 96 (364)
T ss_dssp SSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCe
Confidence 689999999976 7899999999999999999998753 211 11211 1111124667889
Q ss_pred EEEEecC------------------------------------------CCH------------HHHHHHHHHH-cCCCc
Q 013813 160 LFVQFCA------------------------------------------NDP------------EILLNAARRV-EPYCD 184 (436)
Q Consensus 160 livQL~g------------------------------------------~d~------------e~~~~AA~~v-~~g~D 184 (436)
+++||+. ..| ++|++||+++ +.|||
T Consensus 97 i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfD 176 (364)
T 1vyr_A 97 IAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANAREAGFD 176 (364)
T ss_dssp EEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999983 233 7999999766 56999
Q ss_pred EEEEecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccCC----------ChhhHHHH
Q 013813 185 YVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP----------NLQDTIKY 244 (436)
Q Consensus 185 ~IdLN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg~----------~~~d~~~~ 244 (436)
+||||++| |..|.+.+.||++++++++++.+|+++|++.++ .||+||++.+. +.+++.++
T Consensus 177 gVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T 1vyr_A 177 LVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYL 256 (364)
T ss_dssp EEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHH
T ss_pred EEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHH
Confidence 99999986 989999999999999999999999999999984 39999999862 23467889
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++.++++|+|+|++|+++..+. . ...|++++.+++.+++||+++||| ++++++++++.++||+||+||+++.|||
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~--~--~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P~ 331 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGG--K--PYSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANPD 331 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBC--C--CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred HHHHHHhCCCEEEEecCcccCC--C--cccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhChh
Confidence 9999999999999999865432 1 246888999999999999999999 8999999999977999999999999999
Q ss_pred cchhhhhh
Q 013813 325 LFAGFRTA 332 (436)
Q Consensus 325 lf~~i~~~ 332 (436)
|+.+++.+
T Consensus 332 ~~~~~~~g 339 (364)
T 1vyr_A 332 LVARLQKK 339 (364)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99998754
No 6
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.98 E-value=7.6e-32 Score=274.41 Aligned_cols=226 Identities=15% Similarity=0.180 Sum_probs=186.9
Q ss_pred CCcEEEccCCCCC---------cHHHHHHHHHhCCCeEEeCcccch--hhc-------cChhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVDNS---------ELPFRMLCRRYGAEAAYTPMLHSR--IFT-------ESEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~gvt---------d~~fR~l~~~~Ga~l~~Temisa~--~l~-------~~~~~----~~~~~~~~~~e~p 159 (436)
+|+|++|||.+++ +..+|.++++.|+++++||+++.. ... .+.+. +...-..+..+.+
T Consensus 17 ~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~~g~~ 96 (365)
T 2gou_A 17 KNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTEAVHAKGCA 96 (365)
T ss_dssp SSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHHHHHSCE
T ss_pred cCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCe
Confidence 6899999999874 789999999999999999998643 211 11111 1111124567889
Q ss_pred EEEEecC------------------------------------------CCH------------HHHHHHHHHH-cCCCc
Q 013813 160 LFVQFCA------------------------------------------NDP------------EILLNAARRV-EPYCD 184 (436)
Q Consensus 160 livQL~g------------------------------------------~d~------------e~~~~AA~~v-~~g~D 184 (436)
+++||+. ..| ++|++||+++ +.|||
T Consensus 97 i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfD 176 (365)
T 2gou_A 97 IFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNAMEAGFD 176 (365)
T ss_dssp EEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999984 123 7999999766 56999
Q ss_pred EEEEecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccC-C--------ChhhHHHHH
Q 013813 185 YVDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVF-P--------NLQDTIKYA 245 (436)
Q Consensus 185 ~IdLN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg-~--------~~~d~~~~a 245 (436)
+||||++| |..|.+.+.||++|+++++++.+|+++|++.++. ||+||++.. + +.++..+++
T Consensus 177 gVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a 256 (365)
T 2gou_A 177 GIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAA 256 (365)
T ss_dssp EEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHH
T ss_pred EEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHH
Confidence 99999987 9999999999999999999999999999999853 999999983 2 345778999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+.++++|+|+|++|+++..... ...|++++.+++.+++|||++||| ++++++++++.++||+||+||+++.||+|
T Consensus 257 ~~l~~~G~d~i~v~~~~~~~~~----~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~P~l 331 (365)
T 2gou_A 257 ALLNKHRIVYLHIAEVDWDDAP----DTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIANPDL 331 (365)
T ss_dssp HHHHHTTCSEEEEECCBTTBCC----CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHHCTTH
T ss_pred HHHHHcCCCEEEEeCCCcCCCC----CccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHhCchH
Confidence 9999999999999998653211 235788999999999999999999 99999999998679999999999999999
Q ss_pred chhhhhh
Q 013813 326 FAGFRTA 332 (436)
Q Consensus 326 f~~i~~~ 332 (436)
+.+++.+
T Consensus 332 ~~~~~~g 338 (365)
T 2gou_A 332 PERLRHG 338 (365)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9998754
No 7
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.97 E-value=4.5e-31 Score=269.69 Aligned_cols=226 Identities=16% Similarity=0.140 Sum_probs=179.9
Q ss_pred CCcEEEccCCCCC-------cHH---HHHHHHHhCCCeEEeCcccchh--hc-------cChhh----hhhhhhccCCCC
Q 013813 102 RPKLIVAPMVDNS-------ELP---FRMLCRRYGAEAAYTPMLHSRI--FT-------ESEKY----RNEEFATCKEDR 158 (436)
Q Consensus 102 ~~~i~lAPM~gvt-------d~~---fR~l~~~~Ga~l~~Temisa~~--l~-------~~~~~----~~~~~~~~~~e~ 158 (436)
+|+|++|||.+++ +.. ||+.++ |+++++||+++... .. .+.+. +...-..+..+.
T Consensus 28 ~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~ 105 (376)
T 1icp_A 28 CHRVVLAPLTRQRSYGYIPQPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGG 105 (376)
T ss_dssp SCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHHHHHHTTC
T ss_pred CCccEECCcCcCcCCCCCCCHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHHHHHHHHHHhcCC
Confidence 6899999999874 444 444444 79999999987542 11 11211 111113467788
Q ss_pred CEEEEecC--------------------------------------CCH------------HHHHHHHHHH-cCCCcEEE
Q 013813 159 PLFVQFCA--------------------------------------NDP------------EILLNAARRV-EPYCDYVD 187 (436)
Q Consensus 159 plivQL~g--------------------------------------~d~------------e~~~~AA~~v-~~g~D~Id 187 (436)
++++||++ ..| ++|++||+++ ++|||+||
T Consensus 106 ~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVE 185 (376)
T 1icp_A 106 IFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVE 185 (376)
T ss_dssp EEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred eEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 99999987 123 7999999776 56999999
Q ss_pred EecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccCC---------ChhhHHHHHHHH
Q 013813 188 INLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP---------NLQDTIKYAKML 248 (436)
Q Consensus 188 LN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg~---------~~~d~~~~ak~l 248 (436)
||++| |..|.+.+.||++++++++++.+|+++|+++++. ||+||++... +.+++.++++.+
T Consensus 186 ih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~l 265 (376)
T 1icp_A 186 IHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESL 265 (376)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHH
T ss_pred EcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHH
Confidence 99987 9999999999999999999999999999999853 9999998642 234578999999
Q ss_pred HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchh
Q 013813 249 EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAG 328 (436)
Q Consensus 249 e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~ 328 (436)
+++|+++|++|+++..+. .++..+|+.++.+++.+++||+++||| ++++++++|+.++||+||+||+++.||||+.+
T Consensus 266 e~~Gvd~i~v~~~~~~~~--~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k 342 (376)
T 1icp_A 266 NKYDLAYCHVVEPRMKTA--WEKIECTESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISNPDLPKR 342 (376)
T ss_dssp GGGCCSEEEEECCSCCC--------CCCCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHcCCCEEEEcCCcccCC--CCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhCccHHHH
Confidence 999999999999875432 112245677899999999999999999 89999999999779999999999999999999
Q ss_pred hhhh
Q 013813 329 FRTA 332 (436)
Q Consensus 329 i~~~ 332 (436)
++.+
T Consensus 343 ~~~g 346 (376)
T 1icp_A 343 FELN 346 (376)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 8754
No 8
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.97 E-value=3.2e-31 Score=272.91 Aligned_cols=228 Identities=13% Similarity=0.119 Sum_probs=181.6
Q ss_pred CCcEEEccCCCCC---c----HH---HHHHHHHhCCCeEEeCcccch--hhc-------cChhh----hhhhhhccCCCC
Q 013813 102 RPKLIVAPMVDNS---E----LP---FRMLCRRYGAEAAYTPMLHSR--IFT-------ESEKY----RNEEFATCKEDR 158 (436)
Q Consensus 102 ~~~i~lAPM~gvt---d----~~---fR~l~~~~Ga~l~~Temisa~--~l~-------~~~~~----~~~~~~~~~~e~ 158 (436)
+|+|++|||.+++ + .. ||+.++ |+++++||++... ... .+.+. +...-..+..+.
T Consensus 30 ~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~ 107 (402)
T 2hsa_B 30 SHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGA 107 (402)
T ss_dssp SCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHHHHTTC
T ss_pred cCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHHHhcCC
Confidence 6899999999875 3 33 444443 6899999998753 111 11121 111113467788
Q ss_pred CEEEEecC----------------------------------------CCH------------HHHHHHHHHH-cCCCcE
Q 013813 159 PLFVQFCA----------------------------------------NDP------------EILLNAARRV-EPYCDY 185 (436)
Q Consensus 159 plivQL~g----------------------------------------~d~------------e~~~~AA~~v-~~g~D~ 185 (436)
++++||+. ..| ++|++||+++ ++|||+
T Consensus 108 ~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDg 187 (402)
T 2hsa_B 108 VIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDG 187 (402)
T ss_dssp EEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSE
T ss_pred eEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999983 124 7999999876 569999
Q ss_pred EEEecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccCC---------ChhhHHHHHH
Q 013813 186 VDINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP---------NLQDTIKYAK 246 (436)
Q Consensus 186 IdLN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg~---------~~~d~~~~ak 246 (436)
||||++| |..|.+++.||++++++++++.+||++|+++++ .||+||++.+. +.+++.++++
T Consensus 188 VEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~ 267 (402)
T 2hsa_B 188 IEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVE 267 (402)
T ss_dssp EEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHH
T ss_pred EEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHH
Confidence 9999986 999999999999999999999999999999985 59999999752 2356789999
Q ss_pred HHHHcC------ccEEEeccCcccccCCCC------CccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 247 MLEDAG------CSLLAVHGRTRDEKDGKK------FRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 247 ~le~aG------~d~I~VHgRt~~~~~~~~------g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
.++++| +|+|+||+++..+....+ +..+|++++.+++.+++|||+|||| ++++++++|+.++||+||
T Consensus 268 ~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~ 346 (402)
T 2hsa_B 268 RLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIEAVAQGDADLVS 346 (402)
T ss_dssp HHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHCCCCceee
Confidence 999999 999999998765411111 1136888999999999999999999 999999999997799999
Q ss_pred eehHHhhCCccchhhhhh
Q 013813 315 SAESLLENPALFAGFRTA 332 (436)
Q Consensus 315 IGRgal~nP~lf~~i~~~ 332 (436)
+||+++.||||+.+++.+
T Consensus 347 igR~~l~dP~l~~k~~~g 364 (402)
T 2hsa_B 347 YGRLFISNPDLVMRIKLN 364 (402)
T ss_dssp ESHHHHHCTTHHHHHHHT
T ss_pred ecHHHHhCchHHHHHHhC
Confidence 999999999999998764
No 9
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.97 E-value=6.2e-30 Score=258.00 Aligned_cols=231 Identities=15% Similarity=0.142 Sum_probs=183.8
Q ss_pred CCcEEEccCCC---------CCcHHHHHHHHHh--CCCeEEeCcccch--h--hc-----cChhh----hhhhhhccCCC
Q 013813 102 RPKLIVAPMVD---------NSELPFRMLCRRY--GAEAAYTPMLHSR--I--FT-----ESEKY----RNEEFATCKED 157 (436)
Q Consensus 102 ~~~i~lAPM~g---------vtd~~fR~l~~~~--Ga~l~~Temisa~--~--l~-----~~~~~----~~~~~~~~~~e 157 (436)
+|+|++|||.. .|+.....+.++. |+++++||..... . .. .+... ++..-..+..+
T Consensus 17 ~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G 96 (340)
T 3gr7_A 17 KNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHG 96 (340)
T ss_dssp SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTT
T ss_pred cCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCC
Confidence 78999999975 3455666666544 7899999976432 1 00 11111 11111345678
Q ss_pred CCEEEEecCCC-----------------------------------HHHHHHHHHHHc-CCCcEEEEecC---------C
Q 013813 158 RPLFVQFCAND-----------------------------------PEILLNAARRVE-PYCDYVDINLG---------C 192 (436)
Q Consensus 158 ~plivQL~g~d-----------------------------------~e~~~~AA~~v~-~g~D~IdLN~G---------C 192 (436)
..+++||+... .++|++||+++. .|||+||||++ |
T Consensus 97 ~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFls 176 (340)
T 3gr7_A 97 AAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLS 176 (340)
T ss_dssp CEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHC
T ss_pred CeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCC
Confidence 88999996311 579999998765 59999999998 5
Q ss_pred CchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC------CChhhHHHHHHHHHHcCccEEEecc-Ccccc
Q 013813 193 PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF------PNLQDTIKYAKMLEDAGCSLLAVHG-RTRDE 265 (436)
Q Consensus 193 P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg------~~~~d~~~~ak~le~aG~d~I~VHg-Rt~~~ 265 (436)
|..|.+.+.||++++++++++.+|+++|+++++.||+||++.. ++.++..++++.++++|+|+|+||. ++..+
T Consensus 177 p~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~ 256 (340)
T 3gr7_A 177 PLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPA 256 (340)
T ss_dssp TTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCC
T ss_pred CccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCC
Confidence 9999999999999999999999999999999999999999973 5678999999999999999999994 43332
Q ss_pred cCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 266 KDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 266 ~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
........++++++++++.+++||+++|||.|+++++++|+.++||+|++||+++.||+|+.++...
T Consensus 257 ~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~ 323 (340)
T 3gr7_A 257 RMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARE 323 (340)
T ss_dssp CCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHH
Confidence 1111123578999999999999999999999999999999986699999999999999999998753
No 10
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.97 E-value=4.1e-30 Score=255.30 Aligned_cols=224 Identities=15% Similarity=0.169 Sum_probs=181.0
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChh----------------------hhhhhhhcc--CC-
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEK----------------------YRNEEFATC--KE- 156 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~----------------------~~~~~~~~~--~~- 156 (436)
++|+++|+..--.|..|+..+.+.|+++++|+|++.+....+.+ .....+... ..
T Consensus 12 ~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~ 91 (311)
T 1jub_A 12 ANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENA 91 (311)
T ss_dssp SSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTC
T ss_pred CCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcC
Confidence 78999997442238999999999999999999998764322211 000111111 22
Q ss_pred -CCCEEEEecCCCHHHHHHHHHHHc-CCCc-EEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec
Q 013813 157 -DRPLFVQFCANDPEILLNAARRVE-PYCD-YVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 233 (436)
Q Consensus 157 -e~plivQL~g~d~e~~~~AA~~v~-~g~D-~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR 233 (436)
+.|+++||+|++++++.++++.++ .|+| +||||++||+. .+ |..+..+++.+.++++++++.+++||+||++
T Consensus 92 ~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~---~g--~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~ 166 (311)
T 1jub_A 92 QEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV---PG--EPQLAYDFEATEKLLKEVFTFFTKPLGVKLP 166 (311)
T ss_dssp SSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS---SS--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEEC
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC---CC--cccccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 789999999999999999998875 4899 99999999996 22 5667779999999999999999999999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcc-----c------------ccCCCCCc----cCHHHHHHHHhhC--CCcEE
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTR-----D------------EKDGKKFR----ADWNAIKAVKNAL--RIPVL 290 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~-----~------------~~~~~~g~----ad~~~i~~ik~~~--~iPVi 290 (436)
.+.+.++..++++.++++|+|+|++|+++. + ...+.+|+ ..|+.++++++.+ ++|||
T Consensus 167 ~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi 246 (311)
T 1jub_A 167 PYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQII 246 (311)
T ss_dssp CCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEE
Confidence 988877888999999999999999999861 1 00112232 3488999999998 89999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhh-CCccchhhhh
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFRT 331 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~-nP~lf~~i~~ 331 (436)
++|||.|++|+.+++.. |||+||+||+++. +||+|.++..
T Consensus 247 ~~GGI~~~~da~~~l~~-GAd~V~vg~~~l~~~p~~~~~i~~ 287 (311)
T 1jub_A 247 GTGGIETGQDAFEHLLC-GATMLQIGTALHKEGPAIFDRIIK 287 (311)
T ss_dssp EESSCCSHHHHHHHHHH-TCSEEEECHHHHHHCTHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHc-CCCEEEEchHHHhcCcHHHHHHHH
Confidence 99999999999999975 9999999999996 9999987753
No 11
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.96 E-value=3.1e-29 Score=249.27 Aligned_cols=224 Identities=17% Similarity=0.182 Sum_probs=180.6
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhcc--------------------Chhhh--hhhhhc--cCCC
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTE--------------------SEKYR--NEEFAT--CKED 157 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~--------------------~~~~~--~~~~~~--~~~e 157 (436)
++|+++|++.--.+..++..+.++|++++.|++++.+.... +.... ...+.. ...+
T Consensus 14 ~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~ 93 (314)
T 2e6f_A 14 ANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSK 93 (314)
T ss_dssp SSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTT
T ss_pred CCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCC
Confidence 68999998772246788888899999999999998764211 11000 011221 2257
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcC-CCc---EEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec
Q 013813 158 RPLFVQFCANDPEILLNAARRVEP-YCD---YVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~-g~D---~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR 233 (436)
.|+++||+|.+++++.++++.+++ |+| +||||++||+. .+ |..+..+++.+.++++++++.+++||+||++
T Consensus 94 ~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~---~g--~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~ 168 (314)
T 2e6f_A 94 KPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV---PG--KPQVAYDFEAMRTYLQQVSLAYGLPFGVKMP 168 (314)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS---TT--CCCGGGSHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC---CC--chhhcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 899999999999999999988865 789 99999999996 12 5667778999999999999999999999999
Q ss_pred cCCChhhHHHHHHHHHHcC-ccEEEeccCcc-----c---c---------cCCCCC----ccCHHHHHHHHhhC-CCcEE
Q 013813 234 VFPNLQDTIKYAKMLEDAG-CSLLAVHGRTR-----D---E---------KDGKKF----RADWNAIKAVKNAL-RIPVL 290 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG-~d~I~VHgRt~-----~---~---------~~~~~g----~ad~~~i~~ik~~~-~iPVi 290 (436)
.+.+.++..++++.++++| +|+|++|+++. + . ..+.+| +..|++++++++.+ ++|||
T Consensus 169 ~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi 248 (314)
T 2e6f_A 169 PYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVF 248 (314)
T ss_dssp CCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEE
Confidence 9888788889999999999 99999999872 1 0 011222 23489999999998 99999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhh-CCccchhhhh
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFRT 331 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~-nP~lf~~i~~ 331 (436)
++|||.|++|+.+++.. |||+||+||+++. +||+|.++..
T Consensus 249 ~~GGI~~~~da~~~l~~-GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHILA-GASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp EESSCCSHHHHHHHHHH-TCSSEEECHHHHHHCTTHHHHHHH
T ss_pred EECCCCCHHHHHHHHHc-CCCEEEEchhhHhcCcHHHHHHHH
Confidence 99999999999999975 9999999999996 9999987753
No 12
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.96 E-value=3e-29 Score=253.21 Aligned_cols=228 Identities=16% Similarity=0.183 Sum_probs=182.4
Q ss_pred CCcEEEccCCC--------CCcHHHHHHHHHh--CCCeEEeCcccch--h--hc-----cChhh----hhhhhhccCCCC
Q 013813 102 RPKLIVAPMVD--------NSELPFRMLCRRY--GAEAAYTPMLHSR--I--FT-----ESEKY----RNEEFATCKEDR 158 (436)
Q Consensus 102 ~~~i~lAPM~g--------vtd~~fR~l~~~~--Ga~l~~Temisa~--~--l~-----~~~~~----~~~~~~~~~~e~ 158 (436)
+|+|++|||.. .|+.....+.++. |+++++||.+... . .. .+... +...-..+..+.
T Consensus 16 ~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~~G~ 95 (343)
T 3kru_A 16 KNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGA 95 (343)
T ss_dssp SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHTTC
T ss_pred eeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhcCCc
Confidence 78999999976 4556666666544 7899999976432 1 10 11111 111112456788
Q ss_pred CEEEEecCCC------------------------------------HHHHHHHHHHHc-CCCcEEEEe---------cCC
Q 013813 159 PLFVQFCAND------------------------------------PEILLNAARRVE-PYCDYVDIN---------LGC 192 (436)
Q Consensus 159 plivQL~g~d------------------------------------~e~~~~AA~~v~-~g~D~IdLN---------~GC 192 (436)
.+++||+... .++|++||+++. +|||+|||| |+|
T Consensus 96 ~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFls 175 (343)
T 3kru_A 96 VMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLS 175 (343)
T ss_dssp EEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHC
T ss_pred eEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhc
Confidence 8999996310 578999998764 599999999 789
Q ss_pred CchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc------CCChhhHHHHHHHHHHcCccEEEe-ccCcc
Q 013813 193 PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSLLAV-HGRTR 263 (436)
Q Consensus 193 P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~I~V-HgRt~ 263 (436)
|..|.+++.||++++++++++.+|+++|++++ ++||+||++. |++.+++.++++.|+++ +|+|+| ||++.
T Consensus 176 p~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~ 254 (343)
T 3kru_A 176 PLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLL 254 (343)
T ss_dssp TTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSS
T ss_pred ccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceE
Confidence 99999999999999999999999999999999 6899999997 34578899999999999 999999 67765
Q ss_pred cccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 264 DEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 264 ~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
.+........+|++++.+++.+++||+++|||.++++++++++.++||+||+||+++.||+|+.+++
T Consensus 255 ~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 255 NVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp CCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 4321111235799999999999999999999999999999999877999999999999999999886
No 13
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.96 E-value=3.5e-29 Score=251.45 Aligned_cols=221 Identities=17% Similarity=0.162 Sum_probs=176.0
Q ss_pred CCcEEEccCCCCCcHH-HHHHHHHhCCCeEEeCcccchhhccC----------------------h--hhhhhhhhccCC
Q 013813 102 RPKLIVAPMVDNSELP-FRMLCRRYGAEAAYTPMLHSRIFTES----------------------E--KYRNEEFATCKE 156 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~-fR~l~~~~Ga~l~~Temisa~~l~~~----------------------~--~~~~~~~~~~~~ 156 (436)
++|+++|++ +++.. |+..+.+.|++++.|++++.+....+ . ......+.....
T Consensus 55 ~npi~~aag--~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~ 132 (336)
T 1f76_A 55 KNPLGLAAG--LDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY 132 (336)
T ss_dssp SSSEEECTT--SSTTCCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCC
T ss_pred CCCcEeCcc--cCCcHHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhccc
Confidence 689999965 44433 88888899999999999875421111 0 000111222223
Q ss_pred CCCEEEEecCCC-------HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-----
Q 013813 157 DRPLFVQFCAND-------PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL----- 224 (436)
Q Consensus 157 e~plivQL~g~d-------~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~----- 224 (436)
+.|+++||++++ +++|.++++.+.+|+|+||||++||+.+ |...+++++++.+++++|++.+
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~ 206 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIKNKQNDLQA 206 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHHHHHHhhhh
Confidence 579999999998 9999999998877999999999999864 3445678999999999999988
Q ss_pred ----CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccc-----------cCCCCCc----cCHHHHHHHHhhC
Q 013813 225 ----NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE-----------KDGKKFR----ADWNAIKAVKNAL 285 (436)
Q Consensus 225 ----~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~-----------~~~~~g~----ad~~~i~~ik~~~ 285 (436)
++||+||++.+++.++..++++.++++|+|+|+||+++... ..+.+|+ ..++.++++++.+
T Consensus 207 ~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~ 286 (336)
T 1f76_A 207 MHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL 286 (336)
T ss_dssp HHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH
T ss_pred cccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh
Confidence 89999999988888889999999999999999999876421 1112333 2458889999988
Q ss_pred --CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh-CCccchhhhh
Q 013813 286 --RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFRT 331 (436)
Q Consensus 286 --~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~-nP~lf~~i~~ 331 (436)
++|||++|||.|++|+.++++. |||+||+||+++. |||+|.++..
T Consensus 287 ~~~ipVi~~GGI~~~~da~~~l~~-GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 287 NGRLPIIGVGGIDSVIAAREKIAA-GASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp TTSSCEEEESSCCSHHHHHHHHHH-TCSEEEESHHHHHHCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHC-CCCEEEeeHHHHhcCcHHHHHHHh
Confidence 8999999999999999999996 8999999999998 9999998763
No 14
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.96 E-value=5.1e-29 Score=252.18 Aligned_cols=169 Identities=15% Similarity=0.211 Sum_probs=146.7
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc----CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEE
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVE----PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK 231 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~----~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVK 231 (436)
.+.|+++||+|++++++.++|+.++ .|+|+||||+|||+.. + |..|+++++.+.++++++++.+++||+||
T Consensus 125 ~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~---g--g~~l~~~~e~~~~il~av~~~~~~PV~vK 199 (354)
T 4ef8_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP---G--KPQVAYDFDAMRQCLTAVSEVYPHSFGVK 199 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST---T--SCCGGGSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC---C--chhhccCHHHHHHHHHHHHHhhCCCeEEE
Confidence 4689999999999999999999887 3799999999999963 2 67899999999999999999999999999
Q ss_pred eccCCChhhHHHHHHHHHHcC-ccEEEecc------------Ccc-----cccCCCCCc----cCHHHHHHHHhhC-CCc
Q 013813 232 IRVFPNLQDTIKYAKMLEDAG-CSLLAVHG------------RTR-----DEKDGKKFR----ADWNAIKAVKNAL-RIP 288 (436)
Q Consensus 232 iRlg~~~~d~~~~ak~le~aG-~d~I~VHg------------Rt~-----~~~~~~~g~----ad~~~i~~ik~~~-~iP 288 (436)
+|.+++..+..++++.++++| +|+|+++. |+. ....+++|+ .+|+.++++++.. ++|
T Consensus 200 i~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 200 MPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 999988888888899999998 99998754 321 112233443 5799999999986 799
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC-Cccchhhh
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN-PALFAGFR 330 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRgal~n-P~lf~~i~ 330 (436)
||++|||.|.+|+.+++.. |||+|||||+++.| ||+|.++.
T Consensus 280 II~~GGI~s~~da~~~l~a-GAd~V~vgra~l~~GP~~~~~i~ 321 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVLA-GASMVQVGTALQEEGPSIFERLT 321 (354)
T ss_dssp EEEESCCCSHHHHHHHHHH-TEEEEEECHHHHHHCTTHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHc-CCCEEEEhHHHHHhCHHHHHHHH
Confidence 9999999999999999985 99999999999999 99998775
No 15
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=8.6e-29 Score=269.35 Aligned_cols=231 Identities=13% Similarity=0.141 Sum_probs=184.8
Q ss_pred CCcEEEccCCC-CCc--HHHHHHHHH------hCCCeEEeCcccch--hhc--c-----Chhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVD-NSE--LPFRMLCRR------YGAEAAYTPMLHSR--IFT--E-----SEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~g-vtd--~~fR~l~~~------~Ga~l~~Temisa~--~l~--~-----~~~~----~~~~~~~~~~e~p 159 (436)
+|++++|||.+ .++ .+++.+++. .|+++++||+++.. ... . +... +...-..+..+.+
T Consensus 17 ~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~ 96 (671)
T 1ps9_A 17 KNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGK 96 (671)
T ss_dssp SSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTTCC
T ss_pred cCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCE
Confidence 68999999997 444 234444433 48999999998753 211 0 1111 1111124567889
Q ss_pred EEEEecCC----------------------CH------------HHHHHHHHHH-cCCCcEEEEecCC---------Cch
Q 013813 160 LFVQFCAN----------------------DP------------EILLNAARRV-EPYCDYVDINLGC---------PQR 195 (436)
Q Consensus 160 livQL~g~----------------------d~------------e~~~~AA~~v-~~g~D~IdLN~GC---------P~~ 195 (436)
+++||++. .| ++|++||+++ ++|||+||||++| |..
T Consensus 97 i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~ 176 (671)
T 1ps9_A 97 IALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRT 176 (671)
T ss_dssp EEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTT
T ss_pred EEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCcc
Confidence 99999974 33 7899999766 5699999999986 999
Q ss_pred hhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc------CCChhhHHHHHHHHHHcCccEEEeccCcccccC
Q 013813 196 IARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD 267 (436)
Q Consensus 196 ~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~ 267 (436)
|.+++.||++++++++++.+|+++|++.+ ++||+||++. |++.+++.++++.++++|+|+|++|+++.++..
T Consensus 177 n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~ 256 (671)
T 1ps9_A 177 NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARI 256 (671)
T ss_dssp CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSS
T ss_pred CCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcccccc
Confidence 99999999999999999999999999998 7899999986 567788999999999999999999987654321
Q ss_pred ----CCCCc-cCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 268 ----GKKFR-ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 268 ----~~~g~-ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
...+. ..++.++++++.+++||+++|||.++++++++++.++||+|++||+++.||+|+.+++.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g 326 (671)
T 1ps9_A 257 PTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSG 326 (671)
T ss_dssp CSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTT
T ss_pred ccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcC
Confidence 11112 346889999999999999999999999999999986799999999999999999988764
No 16
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.96 E-value=2.3e-28 Score=247.30 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=182.6
Q ss_pred CCcEEEccCCC--------CCcHHHHHHHHHh--CCCeEEeCcccchh----hc-----cChhh----hhhhhhccCCCC
Q 013813 102 RPKLIVAPMVD--------NSELPFRMLCRRY--GAEAAYTPMLHSRI----FT-----ESEKY----RNEEFATCKEDR 158 (436)
Q Consensus 102 ~~~i~lAPM~g--------vtd~~fR~l~~~~--Ga~l~~Temisa~~----l~-----~~~~~----~~~~~~~~~~e~ 158 (436)
+|+|++|||.. .|+.....+.++. |+++++||.+.... .. .+... ++..-..+..+.
T Consensus 16 ~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~ 95 (349)
T 3hgj_A 16 KNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGA 95 (349)
T ss_dssp SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHHHHHHTTC
T ss_pred cCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHHHHHhCCC
Confidence 78999999985 3556666666544 78999999764321 10 11111 111112455677
Q ss_pred CEEEEecCC---------------------------------C------------HHHHHHHHHHH-cCCCcEEEEecCC
Q 013813 159 PLFVQFCAN---------------------------------D------------PEILLNAARRV-EPYCDYVDINLGC 192 (436)
Q Consensus 159 plivQL~g~---------------------------------d------------~e~~~~AA~~v-~~g~D~IdLN~GC 192 (436)
.+++||+.. . .++|++||+++ ++|||+||||++|
T Consensus 96 ~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~ 175 (349)
T 3hgj_A 96 VPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAH 175 (349)
T ss_dssp EEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred eEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 888888521 0 47899999766 5699999999999
Q ss_pred ---------CchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc------CCChhhHHHHHHHHHHcCccE
Q 013813 193 ---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSL 255 (436)
Q Consensus 193 ---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~ 255 (436)
|..|.+++.||++++++++++.+|+++|++.+ ++||.||++. |++.+++.++++.++++|+|+
T Consensus 176 GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~ 255 (349)
T 3hgj_A 176 GYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDL 255 (349)
T ss_dssp TSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCE
T ss_pred chHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999999999999999999 6899999997 567889999999999999999
Q ss_pred EEec-cCcccccCC-CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 256 LAVH-GRTRDEKDG-KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 256 I~VH-gRt~~~~~~-~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
|+|| |++...... .....+++.++++++.+++||+++|||.|+++++++++.+.||+|++||+++.||+|+.++...
T Consensus 256 i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~ 334 (349)
T 3hgj_A 256 LDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKA 334 (349)
T ss_dssp EEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHH
T ss_pred EEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHH
Confidence 9999 444322111 1113578999999999999999999999999999999986699999999999999999988753
No 17
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.96 E-value=2.1e-28 Score=249.02 Aligned_cols=167 Identities=21% Similarity=0.269 Sum_probs=145.7
Q ss_pred CCCEEEEecCC-----CHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc-------c
Q 013813 157 DRPLFVQFCAN-----DPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-------L 224 (436)
Q Consensus 157 e~plivQL~g~-----d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~-------~ 224 (436)
+.|+++||+|+ ++++++++++.+.+++|+||||+|||+.. |..++++++.+.++++++++. +
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~~~~~~~~~~~ 219 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVLQERDGLRRVH 219 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC------CccccCCHHHHHHHHHHHHHHHhhccccC
Confidence 57999999997 79999999999988899999999999973 345789999999999998754 6
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccc-----------cCCCCCcc----CHHHHHHHHhhC--CC
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE-----------KDGKKFRA----DWNAIKAVKNAL--RI 287 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~-----------~~~~~g~a----d~~~i~~ik~~~--~i 287 (436)
++||+||+|.+.+.+++.++|+.++++|+|+|++|+++... ..+.+|++ .|+.++++++.+ ++
T Consensus 220 ~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~i 299 (367)
T 3zwt_A 220 RPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRV 299 (367)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCS
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCc
Confidence 89999999999888899999999999999999999987431 12334443 468899999998 89
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHH-hhCCccchhhh
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESL-LENPALFAGFR 330 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRga-l~nP~lf~~i~ 330 (436)
|||++|||.|.+|+.++++. |||+||+||++ +.+||+|.++.
T Consensus 300 pvI~~GGI~s~~da~~~l~~-GAd~V~vgra~l~~gP~~~~~i~ 342 (367)
T 3zwt_A 300 PIIGVGGVSSGQDALEKIRA-GASLVQLYTALTFWGPPVVGKVK 342 (367)
T ss_dssp CEEEESSCCSHHHHHHHHHH-TCSEEEESHHHHHHCTHHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHc-CCCEEEECHHHHhcCcHHHHHHH
Confidence 99999999999999999985 99999999999 56899998775
No 18
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.96 E-value=3.3e-28 Score=245.59 Aligned_cols=167 Identities=17% Similarity=0.235 Sum_probs=139.0
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHcC-CC-cEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEe
Q 013813 155 KEDRPLFVQFCANDPEILLNAARRVEP-YC-DYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI 232 (436)
Q Consensus 155 ~~e~plivQL~g~d~e~~~~AA~~v~~-g~-D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKi 232 (436)
..+.|+++||+|++++++.++|+.+++ ++ |+||||+|||+.. + |..|+++++.+.+|++++++.+++||+||+
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~---G--~~~l~~~~e~l~~il~av~~~~~~PV~vKi 200 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP---G--XPQIAYDFETTDQILSEVFTYFTKPLGIKL 200 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST---T--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC---C--chhhcCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 457899999999999999999998864 65 5999999999964 3 588899999999999999999999999999
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEE-------------eccCccc-----ccCCCCCccC----HHHHHHHHhhC--CCc
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLA-------------VHGRTRD-----EKDGKKFRAD----WNAIKAVKNAL--RIP 288 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~-------------VHgRt~~-----~~~~~~g~ad----~~~i~~ik~~~--~iP 288 (436)
|.+. +..++++.++++|++.|+ +|.|+.. ...+++|++. |+.++++++.+ ++|
T Consensus 201 ~p~~---~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ip 277 (345)
T 3oix_A 201 PPYF---DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQ 277 (345)
T ss_dssp CCCC---CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSE
T ss_pred CCCC---CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCc
Confidence 9875 445666777777766553 4544421 1233455554 78999999998 799
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehH-HhhCCccchhhh
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAES-LLENPALFAGFR 330 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRg-al~nP~lf~~i~ 330 (436)
||++|||.|++|+.++++. |||+|||||+ ++.+||+|.++.
T Consensus 278 IIg~GGI~s~~da~~~l~a-GAd~V~igra~~~~gP~~~~~i~ 319 (345)
T 3oix_A 278 IIGTGGVXTGRDAFEHILC-GASMVQIGTALHQEGPQIFKRIT 319 (345)
T ss_dssp EEEESSCCSHHHHHHHHHH-TCSEEEESHHHHHHCTHHHHHHH
T ss_pred EEEECCCCChHHHHHHHHh-CCCEEEEChHHHhcChHHHHHHH
Confidence 9999999999999999985 9999999999 899999998775
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=1.8e-28 Score=269.51 Aligned_cols=230 Identities=16% Similarity=0.117 Sum_probs=182.8
Q ss_pred CCcEEEccCCCCC--cHH------HHHHHHHhCCCeEEeCcccchh--h--cc------Chhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVDNS--ELP------FRMLCRRYGAEAAYTPMLHSRI--F--TE------SEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~gvt--d~~------fR~l~~~~Ga~l~~Temisa~~--l--~~------~~~~----~~~~~~~~~~e~p 159 (436)
+|++++|||.... +.+ |++.+ +.|+++++||+++... . .. +... +...-..+..+.+
T Consensus 21 ~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~ 99 (729)
T 1o94_A 21 RNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYGAL 99 (729)
T ss_dssp SSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTTCE
T ss_pred CCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCCCe
Confidence 7899999998753 233 23333 4589999999987531 1 11 1111 1111135678899
Q ss_pred EEEEecCC------------------------C---------------HHHHHHHHHHH-cCCCcEEEEecCC-------
Q 013813 160 LFVQFCAN------------------------D---------------PEILLNAARRV-EPYCDYVDINLGC------- 192 (436)
Q Consensus 160 livQL~g~------------------------d---------------~e~~~~AA~~v-~~g~D~IdLN~GC------- 192 (436)
+++||++. + .++|++||+++ ++|||+||||++|
T Consensus 100 i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qF 179 (729)
T 1o94_A 100 AGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQF 179 (729)
T ss_dssp EEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHH
T ss_pred EEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHh
Confidence 99999983 1 48999999876 5699999999999
Q ss_pred --CchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc-------CCC-hhhHHHHHHHHHHcCccEEEecc
Q 013813 193 --PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV-------FPN-LQDTIKYAKMLEDAGCSLLAVHG 260 (436)
Q Consensus 193 --P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl-------g~~-~~d~~~~ak~le~aG~d~I~VHg 260 (436)
|..|.|+|.||++++++++++.+|+++|++++ ++||+||++. |++ .+++.++++.+++ |+|.|.||+
T Consensus 180 lsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~ 258 (729)
T 1o94_A 180 LNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITI 258 (729)
T ss_dssp HCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEE
T ss_pred cCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEee
Confidence 99999999999999999999999999999999 7999999985 455 5688999999988 799999998
Q ss_pred Ccc---cc---cCCCCC-ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhhh
Q 013813 261 RTR---DE---KDGKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTAE 333 (436)
Q Consensus 261 Rt~---~~---~~~~~g-~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~~ 333 (436)
++. .. ...+.+ ..+|++++.+++.+++|||++|||.|+++++++++.++||+||+||+++.||+|+.+++.+.
T Consensus 259 g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~ 338 (729)
T 1o94_A 259 GDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGR 338 (729)
T ss_dssp CCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTC
T ss_pred ecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcCC
Confidence 751 11 011111 23689999999999999999999999999999999977999999999999999999988654
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=1.9e-28 Score=267.55 Aligned_cols=231 Identities=15% Similarity=0.120 Sum_probs=181.6
Q ss_pred CCcEEEccCCCCCcH-------HHHHHHHHhCCCeEEeCcccchhhc----------cChhh----hhhhhhccCCCCCE
Q 013813 102 RPKLIVAPMVDNSEL-------PFRMLCRRYGAEAAYTPMLHSRIFT----------ESEKY----RNEEFATCKEDRPL 160 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~-------~fR~l~~~~Ga~l~~Temisa~~l~----------~~~~~----~~~~~~~~~~e~pl 160 (436)
+|+|++|||...++. .|+....+.|+++++||+++..... .+... +...-..+..+.++
T Consensus 26 ~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i 105 (690)
T 3k30_A 26 KNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLA 105 (690)
T ss_dssp SSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTTCEE
T ss_pred CCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcCCEE
Confidence 789999999976442 3555666779999999998743211 01111 11111245678899
Q ss_pred EEEecCC--------------------------C---------------HHHHHHHHHHHc-CCCcEEEEecC-------
Q 013813 161 FVQFCAN--------------------------D---------------PEILLNAARRVE-PYCDYVDINLG------- 191 (436)
Q Consensus 161 ivQL~g~--------------------------d---------------~e~~~~AA~~v~-~g~D~IdLN~G------- 191 (436)
++||+.. . .++|++||+++. +|||+||||++
T Consensus 106 ~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~ 185 (690)
T 3k30_A 106 GIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVH 185 (690)
T ss_dssp EEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHH
T ss_pred EEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHH
Confidence 9999941 0 389999998775 59999999876
Q ss_pred ---CCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc------CCChhhHHHHHHHHHHcCccEEEecc
Q 013813 192 ---CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSLLAVHG 260 (436)
Q Consensus 192 ---CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~I~VHg 260 (436)
||..|.|+|.||++++++.+++.+|+++|++++ ++||.+|+.. |++.++..++++.+++ |+|+|.||+
T Consensus 186 qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~ 264 (690)
T 3k30_A 186 HFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAM 264 (690)
T ss_dssp HHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEEC
T ss_pred HhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEec
Confidence 555899999999999999999999999999998 4678888743 5567889999999998 899999998
Q ss_pred Cccccc----CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhhh
Q 013813 261 RTRDEK----DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTAE 333 (436)
Q Consensus 261 Rt~~~~----~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~~ 333 (436)
++.... .......++++++.+++.+++|||++|||.++++++++++.++||+||+||+++.||||+.+++.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~ 341 (690)
T 3k30_A 265 GSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGR 341 (690)
T ss_dssp SCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTC
T ss_pred ccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcCC
Confidence 753211 0111235678899999999999999999999999999999978999999999999999999998653
No 21
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.96 E-value=3.6e-28 Score=251.24 Aligned_cols=229 Identities=15% Similarity=0.164 Sum_probs=182.6
Q ss_pred CCcEEEccCCC--------CCcHHHHHHHHHh-CCCeEEeCcccchh----hc-----cChhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVD--------NSELPFRMLCRRY-GAEAAYTPMLHSRI----FT-----ESEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~g--------vtd~~fR~l~~~~-Ga~l~~Temisa~~----l~-----~~~~~----~~~~~~~~~~e~p 159 (436)
+|+|++|||.. +|+.....+.++. |+++++||...... +. .+... ++..-..+..+..
T Consensus 40 kNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~ 119 (419)
T 3l5a_A 40 SNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMASTMKQHGSL 119 (419)
T ss_dssp SSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHHHHHTTSCE
T ss_pred CCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHHHHHhcCCE
Confidence 78999999975 4666666666655 68999999765321 10 11111 1111234677888
Q ss_pred EEEEecCCC----------------------------------------HHHHHHHHHHH-cCCCcEEEEecCC------
Q 013813 160 LFVQFCAND----------------------------------------PEILLNAARRV-EPYCDYVDINLGC------ 192 (436)
Q Consensus 160 livQL~g~d----------------------------------------~e~~~~AA~~v-~~g~D~IdLN~GC------ 192 (436)
+++||+-.. .++|++||+++ ++|||+||||++|
T Consensus 120 i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~Q 199 (419)
T 3l5a_A 120 AIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQT 199 (419)
T ss_dssp EEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHH
T ss_pred EEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHH
Confidence 999997321 37899999766 5699999999998
Q ss_pred ---CchhhhcCcccccc-cCChHHHHHHHHHHhccc------CccEEEEecc--------CCChhhHHHHHHHHHH-cCc
Q 013813 193 ---PQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL------NVPVSCKIRV--------FPNLQDTIKYAKMLED-AGC 253 (436)
Q Consensus 193 ---P~~~~~~~~~Gs~L-l~~p~~v~eIv~av~~~~------~iPVsVKiRl--------g~~~~d~~~~ak~le~-aG~ 253 (436)
|..|.|+|.||+++ +++++++.+|+++|++++ ++||+||++. |++.+++.++++.+++ +|+
T Consensus 200 FlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gv 279 (419)
T 3l5a_A 200 FFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNI 279 (419)
T ss_dssp HHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCC
T ss_pred ccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCC
Confidence 99999999999999 999999999999999987 6799999987 5677899999999999 999
Q ss_pred cEEEeccCccccc---CCCCCc-cCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 254 SLLAVHGRTRDEK---DGKKFR-ADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 254 d~I~VHgRt~~~~---~~~~g~-ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
|+|+||+++.... ....+. .+|+.++.+++.+ ++|||++|||.|+++++++++. ||+|++||+++.||+|+.
T Consensus 280 d~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ 357 (419)
T 3l5a_A 280 QYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVH 357 (419)
T ss_dssp CCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHH
T ss_pred cEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHH
Confidence 9999999875211 111222 4678889999987 6999999999999999999987 999999999999999999
Q ss_pred hhhhh
Q 013813 328 GFRTA 332 (436)
Q Consensus 328 ~i~~~ 332 (436)
+++.+
T Consensus 358 ki~~G 362 (419)
T 3l5a_A 358 KLAEQ 362 (419)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 98865
No 22
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.95 E-value=1e-27 Score=249.02 Aligned_cols=222 Identities=17% Similarity=0.128 Sum_probs=176.6
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccCh------------------------hhhhhhhhc---c
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESE------------------------KYRNEEFAT---C 154 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~------------------------~~~~~~~~~---~ 154 (436)
+||+++|++.+-....|+.+ .+.|.+++.+++++.+.-..|. ......+.. .
T Consensus 92 ~NPvglAAG~dk~~~~~~~l-~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~ 170 (443)
T 1tv5_A 92 INPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILFRKR 170 (443)
T ss_dssp SSSEEECTTTTTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHHHHHHHHHHHHH
T ss_pred CCCcEECCcccCccHHHHHH-HhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHHHHHHHHHHhhh
Confidence 78999998887666677775 5688899998888754211110 000000110 0
Q ss_pred ------CCCCCEEEEecCCC-----HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc
Q 013813 155 ------KEDRPLFVQFCAND-----PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN 223 (436)
Q Consensus 155 ------~~e~plivQL~g~d-----~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~ 223 (436)
....|+++||++++ +++++++++.+.+++|+||||++||+.+ |..++++++.+.+|+++|++.
T Consensus 171 ~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~~~ 244 (443)
T 1tv5_A 171 QEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEE 244 (443)
T ss_dssp HHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHH
T ss_pred cccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHHHH
Confidence 02468999999998 9999999999988999999999999973 678889999999999999753
Q ss_pred --------------------------------------------------cCcc-EEEEeccCCChhhHHHHHHHHHHcC
Q 013813 224 --------------------------------------------------LNVP-VSCKIRVFPNLQDTIKYAKMLEDAG 252 (436)
Q Consensus 224 --------------------------------------------------~~iP-VsVKiRlg~~~~d~~~~ak~le~aG 252 (436)
.++| |+||++.+++.++..++|+.++++|
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aG 324 (443)
T 1tv5_A 245 IDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETN 324 (443)
T ss_dssp HHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred HhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 3679 9999999888788999999999999
Q ss_pred ccEEEeccCcccc---------cCCCCCcc----CHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 253 CSLLAVHGRTRDE---------KDGKKFRA----DWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 253 ~d~I~VHgRt~~~---------~~~~~g~a----d~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
+|+|++|+++... ..+++|++ .++.++++++.+ ++|||++|||.|++|+.++++. |||+||+||
T Consensus 325 aDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~a-GAd~Vqigr 403 (443)
T 1tv5_A 325 IDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEA-GASVCQLYS 403 (443)
T ss_dssp CSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHT-TEEEEEESH
T ss_pred CCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHc-CCCEEEEcH
Confidence 9999999998632 12233332 468899999998 8999999999999999999986 999999999
Q ss_pred HHhh-CCccchhhhh
Q 013813 318 SLLE-NPALFAGFRT 331 (436)
Q Consensus 318 gal~-nP~lf~~i~~ 331 (436)
+++. +||++.++..
T Consensus 404 all~~gP~l~~~i~~ 418 (443)
T 1tv5_A 404 CLVFNGMKSAVQIKR 418 (443)
T ss_dssp HHHHHGGGHHHHHHH
T ss_pred HHHhcChHHHHHHHH
Confidence 9875 9999988763
No 23
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.95 E-value=7.4e-28 Score=238.12 Aligned_cols=168 Identities=19% Similarity=0.295 Sum_probs=142.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc--CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVE--PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 233 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~--~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR 233 (436)
.+.|+++||+|++++++.++++.++ .|+|+||||++||+.+.+ |..+..+++++.++++++++.+++||+||++
T Consensus 97 ~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g----~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~ 172 (311)
T 1ep3_A 97 PELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG----GQAFGTDPEVAAALVKACKAVSKVPLYVKLS 172 (311)
T ss_dssp TTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT----TEEGGGCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc----hhhhcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 3789999999999999999999887 789999999999996432 5556679999999999999998999999998
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEe---------ccCccccc-----CCCCCccC----HHHHHHHHhhCCCcEEEccCC
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAV---------HGRTRDEK-----DGKKFRAD----WNAIKAVKNALRIPVLANGNV 295 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~V---------HgRt~~~~-----~~~~g~ad----~~~i~~ik~~~~iPVianGGI 295 (436)
.+. .+..++++.++++|+|+|++ |.++.... .+++++.. +++++++++.+++|||++|||
T Consensus 173 ~~~--~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI 250 (311)
T 1ep3_A 173 PNV--TDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGV 250 (311)
T ss_dssp SCS--SCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSC
T ss_pred CCh--HHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCc
Confidence 654 45678899999999999999 44443211 12234444 588899999999999999999
Q ss_pred CCHHHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 296 RHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 296 ~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
.|++|+.++++. |||+|++||+++.+|+++.++.
T Consensus 251 ~~~~d~~~~l~~-GAd~V~vg~~~l~~p~~~~~i~ 284 (311)
T 1ep3_A 251 ANAQDVLEMYMA-GASAVAVGTANFADPFVCPKII 284 (311)
T ss_dssp CSHHHHHHHHHH-TCSEEEECTHHHHCTTHHHHHH
T ss_pred CCHHHHHHHHHc-CCCEEEECHHHHcCcHHHHHHH
Confidence 999999999985 8999999999999999998765
No 24
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.95 E-value=2.1e-27 Score=241.53 Aligned_cols=231 Identities=14% Similarity=0.134 Sum_probs=180.8
Q ss_pred CCcEEEccCCC-------CCcHHHHHHHHHh--CCCeEEeCcccchh----h-----ccChhh----hhhhhhccCCCCC
Q 013813 102 RPKLIVAPMVD-------NSELPFRMLCRRY--GAEAAYTPMLHSRI----F-----TESEKY----RNEEFATCKEDRP 159 (436)
Q Consensus 102 ~~~i~lAPM~g-------vtd~~fR~l~~~~--Ga~l~~Temisa~~----l-----~~~~~~----~~~~~~~~~~e~p 159 (436)
+|+|++|||.. .|+.....+.++. |+++++||.+.... . ..+... ++..-..+..+..
T Consensus 16 ~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~~ 95 (363)
T 3l5l_A 16 RNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKAAGSV 95 (363)
T ss_dssp SSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHHHHHHTTCE
T ss_pred eCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHHHHHhcCCE
Confidence 78999999986 4666676666554 78999999765321 1 011111 1111123456677
Q ss_pred EEEEecCC------------------------------------C----------------HHHHHHHHHHHc-CCCcEE
Q 013813 160 LFVQFCAN------------------------------------D----------------PEILLNAARRVE-PYCDYV 186 (436)
Q Consensus 160 livQL~g~------------------------------------d----------------~e~~~~AA~~v~-~g~D~I 186 (436)
+++||+.. . .++|++||+++. +|||+|
T Consensus 96 i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgV 175 (363)
T 3l5l_A 96 PGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARDAGFEWI 175 (363)
T ss_dssp EEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred EEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 88888621 0 478999997764 599999
Q ss_pred EEecC---------CCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-------CChhhHHHHHHHH
Q 013813 187 DINLG---------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-------PNLQDTIKYAKML 248 (436)
Q Consensus 187 dLN~G---------CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-------~~~~d~~~~ak~l 248 (436)
|||++ ||..|.|++.||+++.++.+++.+|+++|++.+ ++||.||++.. ++.+++.++++.+
T Consensus 176 Eih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L 255 (363)
T 3l5l_A 176 ELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRF 255 (363)
T ss_dssp EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred EEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHH
Confidence 99987 799999999999999999999999999999998 58999999873 4456888999999
Q ss_pred HHcCccEEEeccCcccccCC--CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 249 EDAGCSLLAVHGRTRDEKDG--KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 249 e~aG~d~I~VHgRt~~~~~~--~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
+++|+|+|+||+++...... .....++++++.+++.+++||+++|||.|+++++++++.++||+|++||+++.||+|+
T Consensus 256 ~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~ 335 (363)
T 3l5l_A 256 KAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWA 335 (363)
T ss_dssp HHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHH
T ss_pred HHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHH
Confidence 99999999999764322111 1113578999999999999999999999999999999986699999999999999999
Q ss_pred hhhhhh
Q 013813 327 AGFRTA 332 (436)
Q Consensus 327 ~~i~~~ 332 (436)
.++...
T Consensus 336 ~k~~~~ 341 (363)
T 3l5l_A 336 YFAAKE 341 (363)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 25
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.95 E-value=1.9e-27 Score=241.50 Aligned_cols=220 Identities=16% Similarity=0.166 Sum_probs=174.9
Q ss_pred CCcEEEccCCCC--------CcHHHHHHHHHhCCCeEEeCcccchh----hc-----cChhh----hhhhhhccCCCCCE
Q 013813 102 RPKLIVAPMVDN--------SELPFRMLCRRYGAEAAYTPMLHSRI----FT-----ESEKY----RNEEFATCKEDRPL 160 (436)
Q Consensus 102 ~~~i~lAPM~gv--------td~~fR~l~~~~Ga~l~~Temisa~~----l~-----~~~~~----~~~~~~~~~~e~pl 160 (436)
+|+|++|||... |+.....+.++..+++++||.+.... .. .+... ++..-..+..+..+
T Consensus 16 kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avH~~G~~i 95 (362)
T 4ab4_A 16 PNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNVTKAVHAAGGRI 95 (362)
T ss_dssp SCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred eCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHHHHHHHhcCCEE
Confidence 789999999763 45666667766668899999764321 10 11111 11111245567788
Q ss_pred EEEecCC-----------------------------------C-------------HHHHHHHHHHH-cCCCcEEEEecC
Q 013813 161 FVQFCAN-----------------------------------D-------------PEILLNAARRV-EPYCDYVDINLG 191 (436)
Q Consensus 161 ivQL~g~-----------------------------------d-------------~e~~~~AA~~v-~~g~D~IdLN~G 191 (436)
++||+.. . .++|++||+++ ++|||+||||++
T Consensus 96 ~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a 175 (362)
T 4ab4_A 96 FLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGA 175 (362)
T ss_dssp EEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 8888521 0 46899999766 569999999999
Q ss_pred C---------CchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccCC---------ChhhHHHHHHHHHHcC
Q 013813 192 C---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP---------NLQDTIKYAKMLEDAG 252 (436)
Q Consensus 192 C---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg~---------~~~d~~~~ak~le~aG 252 (436)
| |..|.|.+.||++++++++++.+|+++|+++++. ||+||++... ..++..++++.++++|
T Consensus 176 ~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~G 255 (362)
T 4ab4_A 176 NGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRG 255 (362)
T ss_dssp TTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTT
T ss_pred CccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhC
Confidence 8 9999999999999999999999999999999853 9999998742 1346789999999999
Q ss_pred ccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 253 CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 253 ~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
+|+|+||+++. + . ++++.+++.+++|||++||| |+++++++++.++||+|++||+++.||+|+.+++.+
T Consensus 256 vd~i~v~~~~~----~---~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g 324 (362)
T 4ab4_A 256 IAFICSREREA----D---D---SIGPLIKEAFGGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPDLPARLAAD 324 (362)
T ss_dssp CSEEEEECCCC----T---T---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTT
T ss_pred CCEEEECCCCC----C---H---HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHcC
Confidence 99999999861 1 1 34788999999999999999 999999999987799999999999999999998865
No 26
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.95 E-value=3e-27 Score=240.00 Aligned_cols=221 Identities=17% Similarity=0.164 Sum_probs=175.2
Q ss_pred CCcEEEccCCCC--------CcHHHHHHHHHhCCCeEEeCcccchh----hc-----cChhh----hhhhhhccCCCCCE
Q 013813 102 RPKLIVAPMVDN--------SELPFRMLCRRYGAEAAYTPMLHSRI----FT-----ESEKY----RNEEFATCKEDRPL 160 (436)
Q Consensus 102 ~~~i~lAPM~gv--------td~~fR~l~~~~Ga~l~~Temisa~~----l~-----~~~~~----~~~~~~~~~~e~pl 160 (436)
+|+|++|||... |+...+.+.++..+++++||.+.... .. .+... ++..-..+..+..+
T Consensus 24 kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avH~~G~~i 103 (361)
T 3gka_A 24 ANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLVTDAVHAAGGRI 103 (361)
T ss_dssp SCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred cCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeecccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCeE
Confidence 789999999763 45666666666668899999765321 10 11111 11111245567788
Q ss_pred EEEecCC------------------------------------C------------HHHHHHHHHHH-cCCCcEEEEecC
Q 013813 161 FVQFCAN------------------------------------D------------PEILLNAARRV-EPYCDYVDINLG 191 (436)
Q Consensus 161 ivQL~g~------------------------------------d------------~e~~~~AA~~v-~~g~D~IdLN~G 191 (436)
++||+.. . .++|++||+++ +.|||+||||++
T Consensus 104 ~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a 183 (361)
T 3gka_A 104 FLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGA 183 (361)
T ss_dssp EEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 8888520 0 47899999766 569999999999
Q ss_pred C---------CchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccCC---------ChhhHHHHHHHHHHcC
Q 013813 192 C---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVFP---------NLQDTIKYAKMLEDAG 252 (436)
Q Consensus 192 C---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg~---------~~~d~~~~ak~le~aG 252 (436)
| |..|.|++.||++++++++++.+|+++|+++++. ||+||++... ..++..++++.++++|
T Consensus 184 ~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~G 263 (361)
T 3gka_A 184 NGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRR 263 (361)
T ss_dssp TTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTT
T ss_pred CccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcC
Confidence 8 9999999999999999999999999999999853 9999998732 1356789999999999
Q ss_pred ccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhh
Q 013813 253 CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 253 ~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
+|+|+||+++. + + ++++.+++.+++|||++||| |+++++++++.++||+|++||+++.||+|+.+++.+
T Consensus 264 vd~i~v~~~~~----~---~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g 332 (361)
T 3gka_A 264 IAFLFARESFG----G---D---AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKLN 332 (361)
T ss_dssp CSEEEEECCCS----T---T---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred CCEEEECCCCC----C---H---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHhC
Confidence 99999998861 1 1 34788999999999999999 999999999987799999999999999999998865
Q ss_pred h
Q 013813 333 E 333 (436)
Q Consensus 333 ~ 333 (436)
.
T Consensus 333 ~ 333 (361)
T 3gka_A 333 A 333 (361)
T ss_dssp C
T ss_pred C
Confidence 3
No 27
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.94 E-value=2.5e-26 Score=235.98 Aligned_cols=167 Identities=19% Similarity=0.169 Sum_probs=141.5
Q ss_pred CCCEEEEecCCC-----HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--------
Q 013813 157 DRPLFVQFCAND-----PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-------- 223 (436)
Q Consensus 157 e~plivQL~g~d-----~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~-------- 223 (436)
..++++||++++ ++++.++++.+++.+|+||||++||++. |..++++++.+.+|+++|++.
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~ 254 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNN 254 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccCHHHHHHHHHHHHHHHHhhcccc
Confidence 467999999998 8999999999988899999999999973 678999999999999999875
Q ss_pred ------------cCcc-EEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccc---------cCCCCCccCH----HH
Q 013813 224 ------------LNVP-VSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE---------KDGKKFRADW----NA 277 (436)
Q Consensus 224 ------------~~iP-VsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~---------~~~~~g~ad~----~~ 277 (436)
..+| |+||++.+++.++..++|+.++++|+|+|++|+++... ..+.+|++.| +.
T Consensus 255 ~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~ 334 (415)
T 3i65_A 255 IMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 334 (415)
T ss_dssp CSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred cccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHH
Confidence 2689 99999999888889999999999999999999988632 2334555554 78
Q ss_pred HHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC-Cccchhhh
Q 013813 278 IKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN-PALFAGFR 330 (436)
Q Consensus 278 i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n-P~lf~~i~ 330 (436)
|+++++.+ ++|||++|||.|.+|+.+++.. |||+|||||+++.+ ||+|.++.
T Consensus 335 I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~a-GAd~VqIgra~l~~GP~~~~~i~ 389 (415)
T 3i65_A 335 ICEMYNYTNKQIPIIASGGIFSGLDALEKIEA-GASVCQLYSCLVFNGMKSAVQIK 389 (415)
T ss_dssp HHHHHHHTTTCSCEEECSSCCSHHHHHHHHHH-TEEEEEESHHHHHHGGGHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCCCCHHHHHHHHHc-CCCEEEEcHHHHhcCHHHHHHHH
Confidence 99999998 7999999999999999999985 99999999999877 99998775
No 28
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.94 E-value=5.8e-26 Score=258.03 Aligned_cols=223 Identities=16% Similarity=0.223 Sum_probs=173.7
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchh-hccCh--------------------------------hhh-
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRI-FTESE--------------------------------KYR- 147 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~-l~~~~--------------------------------~~~- 147 (436)
++|+++|||...++.+|+..+...|.+++.++.++... ...+. ...
T Consensus 543 ~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~ 622 (1025)
T 1gte_A 543 INPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWC 622 (1025)
T ss_dssp SSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHHHH
T ss_pred cCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhHHHHH
Confidence 37999999999999999999999999988877665321 00000 000
Q ss_pred --hhhhhccCCCCCEEEEe-cCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc
Q 013813 148 --NEEFATCKEDRPLFVQF-CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN 223 (436)
Q Consensus 148 --~~~~~~~~~e~plivQL-~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~ 223 (436)
...++...++.|+++|+ +|++++++.++++++ +.|+|+|+||+|||+. ...+++|++++++++++.++++++++.
T Consensus 623 ~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 623 QSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQA 701 (1025)
T ss_dssp HHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHh
Confidence 01112223467899988 688999999999887 4699999999999998 455679999999999999999999999
Q ss_pred cCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe----------------------ccCcccccCCCCCccCH----HH
Q 013813 224 LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV----------------------HGRTRDEKDGKKFRADW----NA 277 (436)
Q Consensus 224 ~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V----------------------HgRt~~~~~~~~g~ad~----~~ 277 (436)
+++||+||++.+ ..++.++++.++++|+|+|++ |+|+.. .++++++.| ++
T Consensus 702 ~~~Pv~vK~~~~--~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~--gg~sg~~~~~~~~~~ 777 (1025)
T 1gte_A 702 VQIPFFAKLTPN--VTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTY--GGVSGTAIRPIALRA 777 (1025)
T ss_dssp CSSCEEEEECSC--SSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCC--EEEESGGGHHHHHHH
T ss_pred hCCceEEEeCCC--hHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccC--CCCCcccchhHHHHH
Confidence 999999999874 357888999999999999999 555432 234456664 78
Q ss_pred HHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh-CCccchhhh
Q 013813 278 IKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE-NPALFAGFR 330 (436)
Q Consensus 278 i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~-nP~lf~~i~ 330 (436)
+.++++.+ ++|||++|||.|++|+.++|.. |||+|||||+++. +|.++.++.
T Consensus 778 v~~v~~~~~~ipvi~~GGI~s~~da~~~l~~-Ga~~v~vg~~~l~~~~~~~~~~~ 831 (1025)
T 1gte_A 778 VTTIARALPGFPILATGGIDSAESGLQFLHS-GASVLQVCSAVQNQDFTVIQDYC 831 (1025)
T ss_dssp HHHHHHHSTTCCEEEESSCCSHHHHHHHHHT-TCSEEEESHHHHTSCTTHHHHHH
T ss_pred HHHHHHHcCCCCEEEecCcCCHHHHHHHHHc-CCCEEEEeeccccCCccHHHHHH
Confidence 99999988 8999999999999999999985 9999999999998 554555443
No 29
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.93 E-value=1.7e-25 Score=228.59 Aligned_cols=157 Identities=14% Similarity=0.128 Sum_probs=135.5
Q ss_pred HHHHHHHHHHH--cCCCcEEEEecCC---------Cchhhh-cCcccc-cccCChHHHHHHHHHHhcccC-ccEEEEecc
Q 013813 169 PEILLNAARRV--EPYCDYVDINLGC---------PQRIAR-RGNYGA-FLMDNLPLVKSLVEKLALNLN-VPVSCKIRV 234 (436)
Q Consensus 169 ~e~~~~AA~~v--~~g~D~IdLN~GC---------P~~~~~-~~~~Gs-~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRl 234 (436)
+++|++||+++ ++|||+||||++| |..|.+ ++.||+ +++++++++.+|+++|+++++ .||.||++.
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~ 252 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISP 252 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECc
Confidence 45677888765 4699999999986 998999 999999 999999999999999999985 489999987
Q ss_pred CC---------ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 235 FP---------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 235 g~---------~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
.. +.+++.++++.++++|+++|++|+++... .. ...+ ++.+++.+++|||++||| +++++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-~~----~~~~-~~~ir~~~~iPvi~~G~i-t~~~a~~~l 325 (379)
T 3aty_A 253 LNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN-QQ----IGDV-VAWVRGSYSGVKISNLRY-DFEEADQQI 325 (379)
T ss_dssp TCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS-CC----CCCH-HHHHHTTCCSCEEEESSC-CHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-CC----ccHH-HHHHHHHCCCcEEEECCC-CHHHHHHHH
Confidence 32 34678899999999999999999876432 11 1236 899999999999999999 999999999
Q ss_pred HhcCcceeeeehHHhhCCccchhhhhh
Q 013813 306 EETGCEGVLSAESLLENPALFAGFRTA 332 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~lf~~i~~~ 332 (436)
+.++||+||+||+++.||+|+.+++.+
T Consensus 326 ~~g~aD~V~igR~~l~~P~l~~k~~~g 352 (379)
T 3aty_A 326 REGKVDAVAFGAKFIANPDLVERAQQN 352 (379)
T ss_dssp HTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred HcCCCeEEEecHHHHhCcHHHHHHHcC
Confidence 987799999999999999999998754
No 30
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.93 E-value=1e-25 Score=231.38 Aligned_cols=231 Identities=17% Similarity=0.170 Sum_probs=175.7
Q ss_pred CCcEEEccCCCC--------CcHHHHHHHHHh--CCCeEEeCcccch--h--hcc------Chhh----hhhhhhccCCC
Q 013813 102 RPKLIVAPMVDN--------SELPFRMLCRRY--GAEAAYTPMLHSR--I--FTE------SEKY----RNEEFATCKED 157 (436)
Q Consensus 102 ~~~i~lAPM~gv--------td~~fR~l~~~~--Ga~l~~Temisa~--~--l~~------~~~~----~~~~~~~~~~e 157 (436)
+|+|++|||... |+.....+.++. |+++++||.+... . +.. +... +...-..+..+
T Consensus 26 kNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k~l~~avH~~G 105 (407)
T 3tjl_A 26 QTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVITDKVHANG 105 (407)
T ss_dssp SCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHHHHHHHHHHTT
T ss_pred cCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHHHHHHHHHhcC
Confidence 789999999852 566677777665 5799999976432 1 111 1111 11111345677
Q ss_pred CCEEEEecCCC-------------------------------------------------HHH-HHHHHHHH-cCCCcEE
Q 013813 158 RPLFVQFCAND-------------------------------------------------PEI-LLNAARRV-EPYCDYV 186 (436)
Q Consensus 158 ~plivQL~g~d-------------------------------------------------~e~-~~~AA~~v-~~g~D~I 186 (436)
..+++||+... .++ |++||+++ +.|||+|
T Consensus 106 ~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~aa~~a~~aGfdgv 185 (407)
T 3tjl_A 106 SFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQKAMDAGFDYI 185 (407)
T ss_dssp CEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHHHHHHHHHTTCSEE
T ss_pred CEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 88999997311 245 89999766 5699999
Q ss_pred EEecCC---------CchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccCC---------C----hhhHHH
Q 013813 187 DINLGC---------PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP---------N----LQDTIK 243 (436)
Q Consensus 187 dLN~GC---------P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg~---------~----~~d~~~ 243 (436)
|||++| |..|.+.|.||++++++.+++.+|+++|+++++ .||+||++... + .++..+
T Consensus 186 eih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~ 265 (407)
T 3tjl_A 186 ELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSY 265 (407)
T ss_dssp EEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHH
T ss_pred EECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHH
Confidence 999999 999999999999999999999999999999985 48999998632 2 234678
Q ss_pred HHHHH---HHcC--ccEEEec-cCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHh---cCcceee
Q 013813 244 YAKML---EDAG--CSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEE---TGCEGVL 314 (436)
Q Consensus 244 ~ak~l---e~aG--~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~---tGaDgVm 314 (436)
+++.| ++.| +++|+|| +|+..+.... ...+|..+..+++..++|||+||||.+.+|+.++++. ++||+||
T Consensus 266 l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~-~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa 344 (407)
T 3tjl_A 266 LVHELQQRADKGQGIAYISVVEPRVSGNVDVS-EEDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVG 344 (407)
T ss_dssp HHHHHHHHHHTTCCCSEEEEECTTEETTEECC-GGGCCCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEE
T ss_pred HHHHHHhHhhcCCceeEEEEEccccCCCCcCC-ccchhHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEE
Confidence 89999 8889 9999998 6655432111 1123455778888889999999999999988888877 7899999
Q ss_pred eehHHhhCCccchhhhhhh
Q 013813 315 SAESLLENPALFAGFRTAE 333 (436)
Q Consensus 315 IGRgal~nP~lf~~i~~~~ 333 (436)
+||+++.||||+.+++.+.
T Consensus 345 ~GR~~iaNPdL~~ri~~g~ 363 (407)
T 3tjl_A 345 FSRYFTSNPNLVWKLRDGI 363 (407)
T ss_dssp CSHHHHHCTTHHHHHHHTC
T ss_pred eChhhhhCchHHHHHHcCC
Confidence 9999999999999987643
No 31
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.91 E-value=1.9e-23 Score=212.68 Aligned_cols=201 Identities=17% Similarity=0.214 Sum_probs=156.8
Q ss_pred CCcEEEccCC--CCC----cHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecC-CCHHHHHH
Q 013813 102 RPKLIVAPMV--DNS----ELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCA-NDPEILLN 174 (436)
Q Consensus 102 ~~~i~lAPM~--gvt----d~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g-~d~e~~~~ 174 (436)
+.|+++|||+ +++ +.+|++.|+++|+..++|+|.+. .+. . +....++.|+.+||++ +|++...+
T Consensus 80 ~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~-~le----~----v~~~~~~~~~~~QLy~~~d~~~~~~ 150 (368)
T 2nli_A 80 KAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGA-TFE----E----ISEGLNGGPRWFQIYMAKDDQQNRD 150 (368)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSS-CHH----H----HHHHHTTCCEEEEECCBSSHHHHHH
T ss_pred CCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhH-HHH----H----HHHhCCCCCEEEEEeccCCHHHHHH
Confidence 5699999999 877 58999999999999999999862 221 1 1111246899999998 88888899
Q ss_pred HHHHHcC-CCcEEEEecCCCch------------------hhhc----Ccccccc---c--CChHHHHHHHHHHhcccCc
Q 013813 175 AARRVEP-YCDYVDINLGCPQR------------------IARR----GNYGAFL---M--DNLPLVKSLVEKLALNLNV 226 (436)
Q Consensus 175 AA~~v~~-g~D~IdLN~GCP~~------------------~~~~----~~~Gs~L---l--~~p~~v~eIv~av~~~~~i 226 (436)
++++++. |+++|+||++||.. +... ...|+.+ + .++.+..++++++++.+++
T Consensus 151 ~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~ 230 (368)
T 2nli_A 151 ILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGL 230 (368)
T ss_dssp HHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSS
T ss_pred HHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCC
Confidence 9987764 89999999999982 2210 2346655 3 3777888889999999999
Q ss_pred cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH
Q 013813 227 PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 227 PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~ 304 (436)
||+||.- ...+.++.++++|+|+|+|+++...+ ...+++.|+.+.++++.+ ++|||++|||++.+|+.++
T Consensus 231 PvivK~v------~~~e~a~~a~~~Gad~I~vs~~ggr~--~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~ka 302 (368)
T 2nli_A 231 PVFVKGI------QHPEDADMAIKRGASGIWVSNHGARQ--LYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKA 302 (368)
T ss_dssp CEEEEEE------CSHHHHHHHHHTTCSEEEECCGGGTS--CSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHH
T ss_pred CEEEEcC------CCHHHHHHHHHcCCCEEEEcCCCcCC--CCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHH
Confidence 9999942 22456889999999999995543222 234578899999999887 6999999999999999999
Q ss_pred HHhcCcceeeeehHHh
Q 013813 305 LEETGCEGVLSAESLL 320 (436)
Q Consensus 305 l~~tGaDgVmIGRgal 320 (436)
|.. |||+|||||+++
T Consensus 303 lal-GAd~V~iGr~~l 317 (368)
T 2nli_A 303 LAS-GADVVALGRPVL 317 (368)
T ss_dssp HHT-TCSEEEECHHHH
T ss_pred HHc-CCCEEEECHHHH
Confidence 995 999999999665
No 32
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.90 E-value=1.9e-22 Score=203.51 Aligned_cols=205 Identities=15% Similarity=0.161 Sum_probs=150.7
Q ss_pred CCcEEEccCCCCC-------cHHHHHHHHHhCCCeEEeCcccchhhccChh--hhhhhhhccCCCCCEEEEec-CCCHHH
Q 013813 102 RPKLIVAPMVDNS-------ELPFRMLCRRYGAEAAYTPMLHSRIFTESEK--YRNEEFATCKEDRPLFVQFC-ANDPEI 171 (436)
Q Consensus 102 ~~~i~lAPM~gvt-------d~~fR~l~~~~Ga~l~~Temisa~~l~~~~~--~~~~~~~~~~~e~plivQL~-g~d~e~ 171 (436)
++|+++|||+|++ +.+|++.|+++|+.+++++|.+. + .+.. ...+.+.....+.|+++|+. |.+++.
T Consensus 55 ~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l-~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~ 131 (349)
T 1p0k_A 55 SSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--L-KDPSERLSYEIVRKENPNGLIFANLGSEATAAQ 131 (349)
T ss_dssp SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--T-TCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH
T ss_pred CCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--c-cCcccccceehhhhhCCCceeEEeecCCCCHHH
Confidence 6799999999999 89999999999999989888764 2 1211 11111232356899999999 889988
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHH--HHHHHHHHhcccCccEEEEec-cCCChhhHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPL--VKSLVEKLALNLNVPVSCKIR-VFPNLQDTIKYAKML 248 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~--v~eIv~av~~~~~iPVsVKiR-lg~~~~d~~~~ak~l 248 (436)
+.++++. .|+|+|+||++||+...... | ++++ +.++++++++.+++||.+|+. .+.+ .+.++.+
T Consensus 132 ~~~~~~~--~gad~i~i~~~~~~~~~~~~--~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~----~~~a~~a 198 (349)
T 1p0k_A 132 AKEAVEM--IGANALQIHLNVIQEIVMPE--G-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS----KASAGKL 198 (349)
T ss_dssp HHHHHHH--TTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC----HHHHHHH
T ss_pred HHHHHHh--cCCCeEEecccchhhhcCCC--C-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC----HHHHHHH
Confidence 7765433 47999999999998533221 1 3333 778899999888999999973 4344 3568889
Q ss_pred HHcCccEEEe--ccCcccc-----cC-------CCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 249 EDAGCSLLAV--HGRTRDE-----KD-------GKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 249 e~aG~d~I~V--HgRt~~~-----~~-------~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.++|+|+|+| ||+|... +. ...+...++.+.++++.+ ++|||++|||.+++|+.+++.. |||+|
T Consensus 199 ~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l~~-GAd~V 277 (349)
T 1p0k_A 199 YEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIAL-GASCT 277 (349)
T ss_dssp HHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEE
T ss_pred HHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHc-CCCEE
Confidence 9999999999 7775210 10 123456788999999887 8999999999999999999986 99999
Q ss_pred eeehHHhhCC
Q 013813 314 LSAESLLENP 323 (436)
Q Consensus 314 mIGRgal~nP 323 (436)
+|||+++...
T Consensus 278 ~iG~~~l~~~ 287 (349)
T 1p0k_A 278 GMAGHFLKAL 287 (349)
T ss_dssp EECHHHHHHH
T ss_pred EEcHHHHHHH
Confidence 9999887653
No 33
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.87 E-value=7.6e-22 Score=202.42 Aligned_cols=201 Identities=14% Similarity=0.146 Sum_probs=153.5
Q ss_pred CCcEEEccCCCCCcHH-------HHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecC-CCHHHHH
Q 013813 102 RPKLIVAPMVDNSELP-------FRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCA-NDPEILL 173 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~-------fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g-~d~e~~~ 173 (436)
+.|+++||| ++++.. |++.|+++|+..++|+|.+. .+. . +.....+.|+.+||++ .|++...
T Consensus 94 ~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~le----~----v~~~~~~~~~~~QLy~~~d~~~~~ 163 (392)
T 2nzl_A 94 SMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SIE----E----VAEAGPEALRWLQLYIYKDREVTK 163 (392)
T ss_dssp SSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CHH----H----HHHHCTTSEEEEEECCBSSHHHHH
T ss_pred CCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HHH----H----HHHhcCCCcEEEEEEecCCHHHHH
Confidence 469999999 888876 99999999999999998862 221 1 1112246899999987 7888888
Q ss_pred HHHHHHcC-CCcEEEEecCCCch---------------hh-----h------cC----cccc---cccC---ChHHHHHH
Q 013813 174 NAARRVEP-YCDYVDINLGCPQR---------------IA-----R------RG----NYGA---FLMD---NLPLVKSL 216 (436)
Q Consensus 174 ~AA~~v~~-g~D~IdLN~GCP~~---------------~~-----~------~~----~~Gs---~Ll~---~p~~v~eI 216 (436)
+.++++++ |+++|+||++||.. .. . .. +.|+ .++. ++++..++
T Consensus 164 ~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~ 243 (392)
T 2nzl_A 164 KLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWED 243 (392)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHH
Confidence 98887754 89999999999984 11 0 00 1122 2333 77777888
Q ss_pred HHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccC
Q 013813 217 VEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGN 294 (436)
Q Consensus 217 v~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGG 294 (436)
++++++.+++||+||.- .+ .+.|+.+.++|+|+|+|+++...+ ...+++.|+.+.++++.+ ++|||++||
T Consensus 244 i~~lr~~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs~~ggr~--~~~g~~~~~~l~~v~~av~~~ipVia~GG 315 (392)
T 2nzl_A 244 IKWLRRLTSLPIVAKGI--LR----GDDAREAVKHGLNGILVSNHGARQ--LDGVPATIDVLPEIVEAVEGKVEVFLDGG 315 (392)
T ss_dssp HHHHC--CCSCEEEEEE--CC----HHHHHHHHHTTCCEEEECCGGGTS--STTCCCHHHHHHHHHHHHTTSSEEEECSS
T ss_pred HHHHHHhhCCCEEEEec--CC----HHHHHHHHHcCCCEEEeCCCCCCc--CCCCcChHHHHHHHHHHcCCCCEEEEECC
Confidence 99999999999999942 12 455889999999999996554332 234578899999999887 599999999
Q ss_pred CCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 295 VRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 295 I~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
|.+.+|+.++|.. |||+|||||+++.
T Consensus 316 I~~g~Dv~kalal-GAd~V~iGr~~l~ 341 (392)
T 2nzl_A 316 VRKGTDVLKALAL-GAKAVFVGRPIVW 341 (392)
T ss_dssp CCSHHHHHHHHHT-TCSEEEECHHHHH
T ss_pred CCCHHHHHHHHHh-CCCeeEECHHHHH
Confidence 9999999999995 9999999997664
No 34
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.87 E-value=1.3e-21 Score=198.52 Aligned_cols=229 Identities=17% Similarity=0.193 Sum_probs=171.9
Q ss_pred CCcEEEccCCC--------CCcHHHHHHHHHhCCCeEEeCcccch--h--hc-----cChhh----hhhhhhccCCCCCE
Q 013813 102 RPKLIVAPMVD--------NSELPFRMLCRRYGAEAAYTPMLHSR--I--FT-----ESEKY----RNEEFATCKEDRPL 160 (436)
Q Consensus 102 ~~~i~lAPM~g--------vtd~~fR~l~~~~Ga~l~~Temisa~--~--l~-----~~~~~----~~~~~~~~~~e~pl 160 (436)
+|+|++|||.. +|+.....+.++.++++++||.+... . .. .+... +...-..+..+..+
T Consensus 16 kNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G~~i 95 (358)
T 4a3u_A 16 KNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQAVHDAGGLI 95 (358)
T ss_dssp SCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECccccCCCCCcccCchHhHHHHHHHHHHHHhcCCce
Confidence 78999999974 46777777887778899999975432 1 10 01111 11111345678889
Q ss_pred EEEecCCC-----------------------------------------------HHHHHHHHHHH-cCCCcEEEEecC-
Q 013813 161 FVQFCAND-----------------------------------------------PEILLNAARRV-EPYCDYVDINLG- 191 (436)
Q Consensus 161 ivQL~g~d-----------------------------------------------~e~~~~AA~~v-~~g~D~IdLN~G- 191 (436)
++||+... .++|++||+++ ++|||+||||++
T Consensus 96 ~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ah 175 (358)
T 4a3u_A 96 FAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAAN 175 (358)
T ss_dssp EEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred eeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHHcCCCeEeecccC
Confidence 99985211 36799999776 569999999975
Q ss_pred --------CCchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccC------C---ChhhHHHHHHHHHHcCc
Q 013813 192 --------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF------P---NLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 192 --------CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg------~---~~~d~~~~ak~le~aG~ 253 (436)
+|..|.|+|.||+++.++.+++.||+++|++.++ -+|.||+... . +.+....+++.+++.|+
T Consensus 176 GYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 255 (358)
T 4a3u_A 176 GYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDI 255 (358)
T ss_dssp TSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTC
T ss_pred CCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCc
Confidence 8999999999999999999999999999999884 4577777542 1 22344667888999999
Q ss_pred cEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhhhh
Q 013813 254 SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRTAE 333 (436)
Q Consensus 254 d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~~~ 333 (436)
+.+.++.......... .....+.+.+|+.+..||++ ||+.+++.++++|+.+.||.|.+||+++.||+|.++++.+.
T Consensus 256 ~~i~~~~~~~~~~~~~--~~~~~~a~~ik~~~~~~v~~-~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~~g~ 332 (358)
T 4a3u_A 256 AFLGMREGAVDGTFGK--TDQPKLSPEIRKVFKPPLVL-NQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKA 332 (358)
T ss_dssp SEEEEECCBTTCSSSB--CSSCCCHHHHHHHCCSCEEE-ESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred cccccccccccCcccc--cccHHHHHHHHHhcCCcEEE-eCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHHhCC
Confidence 9999986654432221 12234467788888877775 66789999999999977999999999999999999998653
No 35
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.87 E-value=3.2e-21 Score=196.39 Aligned_cols=198 Identities=21% Similarity=0.234 Sum_probs=152.3
Q ss_pred CCcEEEccCCCCCcHH-------HHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEec-CCCHHHHH
Q 013813 102 RPKLIVAPMVDNSELP-------FRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFC-ANDPEILL 173 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~-------fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~-g~d~e~~~ 173 (436)
+.|+++||| |+++.+ |++.|+++|+..++++|.+... + ++....+ .|..+||+ ++|++...
T Consensus 71 ~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~i-----e----ev~~~~~-~~~~~QLy~~~d~~~~~ 139 (370)
T 1gox_A 71 SMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSSV-----E----EVASTGP-GIRFFQLYVYKDRNVVA 139 (370)
T ss_dssp SSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCH-----H----HHHTTCC-CCEEEEECCBSSHHHHH
T ss_pred CCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCCH-----H----HHHhhcC-CCceEEEecCCCchHHH
Confidence 469999999 899887 9999999999999999885421 1 1111112 78999996 88999888
Q ss_pred HHHHHHc-CCCcEEEEecCCCch--------------------hhhc-------Ccccccc------cCChHHHHHHHHH
Q 013813 174 NAARRVE-PYCDYVDINLGCPQR--------------------IARR-------GNYGAFL------MDNLPLVKSLVEK 219 (436)
Q Consensus 174 ~AA~~v~-~g~D~IdLN~GCP~~--------------------~~~~-------~~~Gs~L------l~~p~~v~eIv~a 219 (436)
+.++.++ .|++.|+||++||.. +... ...|+.+ +.++.+..+.+++
T Consensus 140 ~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~ 219 (370)
T 1gox_A 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAW 219 (370)
T ss_dssp HHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHH
Confidence 8887775 489999999999974 1111 1224443 4466666677999
Q ss_pred HhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--ccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCC
Q 013813 220 LALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNV 295 (436)
Q Consensus 220 v~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V--HgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI 295 (436)
+++.+++||.+|.... .+.++.+.++|+|+|+| |+.. + ...+.++|+.+.++++.+ ++|||++|||
T Consensus 220 l~~~~~~pv~vK~~~~------~e~a~~a~~~Gad~I~vs~~ggr--~--~~~~~~~~~~l~~v~~~~~~~ipvia~GGI 289 (370)
T 1gox_A 220 LQTITSLPILVKGVIT------AEDARLAVQHGAAGIIVSNHGAR--Q--LDYVPATIMALEEVVKAAQGRIPVFLDGGV 289 (370)
T ss_dssp HHHHCCSCEEEECCCS------HHHHHHHHHTTCSEEEECCGGGT--S--STTCCCHHHHHHHHHHHTTTSSCEEEESSC
T ss_pred HHHHhCCCEEEEecCC------HHHHHHHHHcCCCEEEECCCCCc--c--CCCcccHHHHHHHHHHHhCCCCEEEEECCC
Confidence 9998999999997642 34578899999999999 5421 1 223367899999999988 7999999999
Q ss_pred CCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 296 RHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 296 ~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
.+.+|+.+++.. |||+|||||+++.
T Consensus 290 ~~~~D~~k~l~~-GAdaV~iGr~~l~ 314 (370)
T 1gox_A 290 RRGTDVFKALAL-GAAGVFIGRPVVF 314 (370)
T ss_dssp CSHHHHHHHHHH-TCSEEEECHHHHH
T ss_pred CCHHHHHHHHHc-CCCEEeecHHHHH
Confidence 999999999985 9999999998764
No 36
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.84 E-value=6.2e-20 Score=185.69 Aligned_cols=170 Identities=15% Similarity=0.182 Sum_probs=125.1
Q ss_pred CCCCCEEEEecCCCHHHHHHHHHHHc----CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEE
Q 013813 155 KEDRPLFVQFCANDPEILLNAARRVE----PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC 230 (436)
Q Consensus 155 ~~e~plivQL~g~d~e~~~~AA~~v~----~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsV 230 (436)
..+.|+++||.|++++++.+.++.++ .++|+|+||++||+.. .|..+..+++.+.++++++++.+..|+.+
T Consensus 124 ~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~pv~v 198 (354)
T 3tjx_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHhhccccc
Confidence 45789999999999999988876543 3789999999999863 26678889999999999999999999999
Q ss_pred EeccCCChhhHHHHHHHHHHcC-ccEEEe----------ccCcc-------cccCCCCCccCHHH----HHHHHhhC-CC
Q 013813 231 KIRVFPNLQDTIKYAKMLEDAG-CSLLAV----------HGRTR-------DEKDGKKFRADWNA----IKAVKNAL-RI 287 (436)
Q Consensus 231 KiRlg~~~~d~~~~ak~le~aG-~d~I~V----------HgRt~-------~~~~~~~g~ad~~~----i~~ik~~~-~i 287 (436)
|++.+.+.......+..+.+.+ ++.++. ..++. .+..+.+|++.|+. +.++++.+ ++
T Consensus 199 K~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~ 278 (354)
T 3tjx_A 199 KMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGK 278 (354)
T ss_dssp EECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTS
T ss_pred ccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCC
Confidence 9999887655555666665543 444332 11221 11234566666654 45555554 79
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHH-hhCCccchhhh
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESL-LENPALFAGFR 330 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRga-l~nP~lf~~i~ 330 (436)
|||++|||.|.+||.+++.. |||+||||+|+ +.+|++|.++.
T Consensus 279 pIIg~GGI~s~~Da~e~i~a-GAs~Vqv~Ta~~y~GP~~~~~I~ 321 (354)
T 3tjx_A 279 LIFGCGGVYTGEDAFLHVLA-GASMVQVGTALQEEGPSIFERLT 321 (354)
T ss_dssp EEEEESSCCSHHHHHHHHHH-TEEEEEECHHHHHHCTTHHHHHH
T ss_pred cEEEeCCcCCHHHHHHHHHc-CCCEEEEChhhhhcCchHHHHHH
Confidence 99999999999999999985 99999999996 57899998775
No 37
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.84 E-value=5.2e-20 Score=184.68 Aligned_cols=192 Identities=16% Similarity=0.162 Sum_probs=148.6
Q ss_pred HHhC-CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHH
Q 013813 98 TKLG-RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNA 175 (436)
Q Consensus 98 ~~lg-~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~A 175 (436)
+.+| +.||++|||.++|+..|+..+.+.|+ +++.+++++.+.+....+.... + .+.|+.||++..+++ +.+.
T Consensus 7 ~~l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~-~----~~~p~gvnl~~~~~~-~~~~ 80 (332)
T 2z6i_A 7 ELLKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKS-L----TDKPFGVNIMLLSPF-VEDI 80 (332)
T ss_dssp HHHTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHH-H----CCSCEEEEECTTSTT-HHHH
T ss_pred HHhCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHH-h----cCCCEEEEecCCCCC-HHHH
Confidence 4455 77999999999999999999999987 8888888876554322111111 1 258999999997665 4555
Q ss_pred HHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCcc
Q 013813 176 ARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 176 A~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d 254 (436)
++. ++.|+|+|++|+|||.. +++.+++ .++||.+|+ ...+.++.+++.|+|
T Consensus 81 ~~~a~~~g~d~V~~~~g~p~~--------------------~i~~l~~-~g~~v~~~v-------~~~~~a~~~~~~GaD 132 (332)
T 2z6i_A 81 VDLVIEEGVKVVTTGAGNPSK--------------------YMERFHE-AGIIVIPVV-------PSVALAKRMEKIGAD 132 (332)
T ss_dssp HHHHHHTTCSEEEECSSCGGG--------------------THHHHHH-TTCEEEEEE-------SSHHHHHHHHHTTCS
T ss_pred HHHHHHCCCCEEEECCCChHH--------------------HHHHHHH-cCCeEEEEe-------CCHHHHHHHHHcCCC
Confidence 544 46799999999999832 3455554 378999986 224567888999999
Q ss_pred EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 255 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 255 ~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
+|.++|+...+..+ ...+|++++++++.+++||+++|||.+++++.+++.. |||+|++||+++.+|+..
T Consensus 133 ~i~v~g~~~GG~~g--~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~-GAdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 133 AVIAEGMEAGGHIG--KLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFML-GAEAVQVGTRFVVAKESN 201 (332)
T ss_dssp CEEEECTTSSEECC--SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHTBTTCC
T ss_pred EEEEECCCCCCCCC--CccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc-CCCEEEecHHHhcCcccc
Confidence 99999874322111 2467999999999999999999999999999999985 999999999999999754
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.84 E-value=6.4e-20 Score=193.95 Aligned_cols=201 Identities=16% Similarity=0.164 Sum_probs=154.4
Q ss_pred CCcEEEccCCC---C----CcHHHHHHHHH--hCCCeEEeCcccchhhccChhhhhhhhhcc-CCCCCEEEEec-CCCHH
Q 013813 102 RPKLIVAPMVD---N----SELPFRMLCRR--YGAEAAYTPMLHSRIFTESEKYRNEEFATC-KEDRPLFVQFC-ANDPE 170 (436)
Q Consensus 102 ~~~i~lAPM~g---v----td~~fR~l~~~--~Ga~l~~Temisa~~l~~~~~~~~~~~~~~-~~e~plivQL~-g~d~e 170 (436)
+.|+++|||++ + ++.+|++.|++ +|+..++++|.+... ... .... ..+.|..+||+ +.|++
T Consensus 189 ~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~-----e~v---~~~~~~~~~~~~~QLy~~~d~~ 260 (511)
T 1kbi_A 189 DVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSP-----EEI---IEAAPSDKQIQWYQLYVNSDRK 260 (511)
T ss_dssp SSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCH-----HHH---HHTCCCSSCCEEEEECCCSSHH
T ss_pred CCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCH-----HHH---HhhcCCCCCCeEEEEeecCCHH
Confidence 46899999997 4 58999999999 999999999953311 000 1111 24678999998 89999
Q ss_pred HHHHHHHHHcC-CCcEEEEecCCCc-hh----hhc-----------------Cccc--cccc---CChHHHHHHHHHHhc
Q 013813 171 ILLNAARRVEP-YCDYVDINLGCPQ-RI----ARR-----------------GNYG--AFLM---DNLPLVKSLVEKLAL 222 (436)
Q Consensus 171 ~~~~AA~~v~~-g~D~IdLN~GCP~-~~----~~~-----------------~~~G--s~Ll---~~p~~v~eIv~av~~ 222 (436)
.+.+++++++. |+++|.|+++||+ .+ .+. +.++ +.++ .++.+..++++++++
T Consensus 261 ~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~ 340 (511)
T 1kbi_A 261 ITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKK 340 (511)
T ss_dssp HHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHH
Confidence 99999988865 9999999999998 11 111 1111 1223 477777888999999
Q ss_pred ccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--ccCcccccCCCCCccCHHHHHHHHhhC-------CCcEEEcc
Q 013813 223 NLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIKAVKNAL-------RIPVLANG 293 (436)
Q Consensus 223 ~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V--HgRt~~~~~~~~g~ad~~~i~~ik~~~-------~iPVianG 293 (436)
.+++||+||.- .+ .+.|+.++++|+|+|+| ||++ +. ..++..|+.+.++++.+ ++|||++|
T Consensus 341 ~~~~PvivKgv--~~----~e~A~~a~~aGad~I~vs~hgG~--~~--d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~G 410 (511)
T 1kbi_A 341 KTKLPIVIKGV--QR----TEDVIKAAEIGVSGVVLSNHGGR--QL--DFSRAPIEVLAETMPILEQRNLKDKLEVFVDG 410 (511)
T ss_dssp HCSSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCTTTT--SS--TTCCCHHHHHHHHHHHHHTTTCBTTBEEEEES
T ss_pred HhCCcEEEEeC--CC----HHHHHHHHHcCCCEEEEcCCCCc--cC--CCCCchHHHHHHHHHHHHhhccCCCcEEEEEC
Confidence 99999999932 12 45688899999999999 5554 22 22356789999998876 79999999
Q ss_pred CCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 294 NVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 294 GI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
||.+..|+.++|.. |||+|||||+++.
T Consensus 411 GI~~g~Dv~kaLal-GAdaV~iGr~~l~ 437 (511)
T 1kbi_A 411 GVRRGTDVLKALCL-GAKGVGLGRPFLY 437 (511)
T ss_dssp SCCSHHHHHHHHHH-TCSEEEECHHHHH
T ss_pred CCCCHHHHHHHHHc-CCCEEEECHHHHH
Confidence 99999999999995 9999999996663
No 39
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.84 E-value=6e-20 Score=184.21 Aligned_cols=204 Identities=18% Similarity=0.145 Sum_probs=146.1
Q ss_pred CCcEEEccCCCCCcH------HHHHHHHHhCCCeEEeCcccchhhcc-ChhhhhhhhhccCCCCCEE-----EEecCCCH
Q 013813 102 RPKLIVAPMVDNSEL------PFRMLCRRYGAEAAYTPMLHSRIFTE-SEKYRNEEFATCKEDRPLF-----VQFCANDP 169 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~------~fR~l~~~~Ga~l~~Temisa~~l~~-~~~~~~~~~~~~~~e~pli-----vQL~g~d~ 169 (436)
+.|+++|||++.++. +|++.|+++|+..++++|.++ +.+ ......+ +.....+.|++ +|+++.++
T Consensus 58 ~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~~~~~ 134 (332)
T 1vcf_A 58 KAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEALRSFR-VRKVAPKALLIANLGLAQLRRYGR 134 (332)
T ss_dssp SSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGGTCCH
T ss_pred CCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCccceEE-eeccCCCceeecccChhhhhccCh
Confidence 579999999998864 999999999999999999875 322 1111112 23334578887 67788899
Q ss_pred HHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEE-eccCCChhhHHHHHHHH
Q 013813 170 EILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK-IRVFPNLQDTIKYAKML 248 (436)
Q Consensus 170 e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVK-iRlg~~~~d~~~~ak~l 248 (436)
+.+.++++.+. +|++.+|..+.+.... + |.. +.+.+.++++++++ +++||+|| +..|.+. +.++.+
T Consensus 135 ~~~~~a~~~~~--~~a~~i~~n~~~~~~~-~--~~~---~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~----e~a~~~ 201 (332)
T 1vcf_A 135 DDLLRLVEMLE--ADALAFHVNPLQEAVQ-R--GDT---DFRGLVERLAELLP-LPFPVMVKEVGHGLSR----EAALAL 201 (332)
T ss_dssp HHHHHHHHHHT--CSEEEEECCHHHHHHT-T--SCC---CCTTHHHHHHHHCS-CSSCEEEECSSSCCCH----HHHHHH
T ss_pred HHHHHHHhhcC--CCceeeccchHHHHhc-C--CCc---cHHHHHHHHHHHHc-CCCCEEEEecCCCCCH----HHHHHH
Confidence 99999887663 5666666544332211 1 111 12236788999999 99999999 5444443 347889
Q ss_pred HHcCccEEEe--ccCc--------ccc------cCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 249 EDAGCSLLAV--HGRT--------RDE------KDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 249 e~aG~d~I~V--HgRt--------~~~------~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
+++|+|+|+| ||++ +.+ .....+.+.|+.+.++++.+ ++|||++|||.+.+|+.++|.. |||
T Consensus 202 ~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~~-GAd 280 (332)
T 1vcf_A 202 RDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKALAL-GAD 280 (332)
T ss_dssp TTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHHHH-TCS
T ss_pred HHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHHHh-CCC
Confidence 9999999999 7664 211 00223456789999999988 8999999999999999999996 999
Q ss_pred eeeeehHHhhC
Q 013813 312 GVLSAESLLEN 322 (436)
Q Consensus 312 gVmIGRgal~n 322 (436)
+||+||+++..
T Consensus 281 ~V~igr~~l~~ 291 (332)
T 1vcf_A 281 LLAVARPLLRP 291 (332)
T ss_dssp EEEECGGGHHH
T ss_pred hHhhhHHHHHH
Confidence 99999987754
No 40
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.82 E-value=8.2e-20 Score=187.85 Aligned_cols=232 Identities=14% Similarity=0.134 Sum_probs=159.3
Q ss_pred CCcEEEccCCC--------CC--cHHHHHHHHHh--CCCeEEeCcccch--h--hc-----cChhh----hhhhhhccCC
Q 013813 102 RPKLIVAPMVD--------NS--ELPFRMLCRRY--GAEAAYTPMLHSR--I--FT-----ESEKY----RNEEFATCKE 156 (436)
Q Consensus 102 ~~~i~lAPM~g--------vt--d~~fR~l~~~~--Ga~l~~Temisa~--~--l~-----~~~~~----~~~~~~~~~~ 156 (436)
+|+|++|||.. ++ |...+.+.++. |+++++||.+... . .. .+... +...-..+..
T Consensus 29 kNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~davH~~ 108 (400)
T 4gbu_A 29 LHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEK 108 (400)
T ss_dssp SSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHHHHHHHHHT
T ss_pred cCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHHHHHHHHhc
Confidence 78999999974 22 44566666655 6899999985432 1 10 11111 1111134567
Q ss_pred CCCEEEEecCCC--------------------------------------------------HHHHHHHHHHH-cCCCcE
Q 013813 157 DRPLFVQFCAND--------------------------------------------------PEILLNAARRV-EPYCDY 185 (436)
Q Consensus 157 e~plivQL~g~d--------------------------------------------------~e~~~~AA~~v-~~g~D~ 185 (436)
+..+++||+... .++|++||+++ ++|||+
T Consensus 109 G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDg 188 (400)
T 4gbu_A 109 KSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADG 188 (400)
T ss_dssp TCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred CCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHhcCcCe
Confidence 889999996321 25799999776 569999
Q ss_pred EEEecC---------CCchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccCC------C------hhhHHH
Q 013813 186 VDINLG---------CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVFP------N------LQDTIK 243 (436)
Q Consensus 186 IdLN~G---------CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg~------~------~~d~~~ 243 (436)
||||.+ +|..|.|+|.||+++.++.+++.||+++|+++++ -||.||+.... + ..+..+
T Consensus 189 VEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~ 268 (400)
T 4gbu_A 189 VEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAY 268 (400)
T ss_dssp EEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHH
T ss_pred eeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhhHHHHHH
Confidence 999964 8999999999999999999999999999999983 58888875421 1 123445
Q ss_pred HHHHHHHcC-----ccEEEecc-Cccccc-CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 244 YAKMLEDAG-----CSLLAVHG-RTRDEK-DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 244 ~ak~le~aG-----~d~I~VHg-Rt~~~~-~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++.++..| .+.+.+.. +..... ....+.........+++.+++|||++|||.+..++.+.+...+||.|.+|
T Consensus 269 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~g 348 (400)
T 4gbu_A 269 VAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYG 348 (400)
T ss_dssp HHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECC
T ss_pred HHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHH
Confidence 566665543 33444432 211110 00001111122345777889999999999987777777766799999999
Q ss_pred hHHhhCCccchhhhhhh
Q 013813 317 ESLLENPALFAGFRTAE 333 (436)
Q Consensus 317 Rgal~nP~lf~~i~~~~ 333 (436)
|+++.||+|.++++.+.
T Consensus 349 R~~iadPdl~~k~~~G~ 365 (400)
T 4gbu_A 349 RFFISNPDLVDRLEKGL 365 (400)
T ss_dssp HHHHHCTTHHHHHHHTC
T ss_pred HHHHHCcHHHHHHHcCC
Confidence 99999999999998754
No 41
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.77 E-value=1.5e-17 Score=166.55 Aligned_cols=192 Identities=16% Similarity=0.194 Sum_probs=143.6
Q ss_pred HHHhC-CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHH
Q 013813 97 WTKLG-RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLN 174 (436)
Q Consensus 97 ~~~lg-~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~ 174 (436)
.+.++ +.||++|||.++|+..|+..+.+.|+ +++.+.+++.+.+....+. ++. ..+.|+.|+++..+++. .+
T Consensus 20 ~~~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~----i~~-~~~~p~gVnl~~~~~~~-~~ 93 (326)
T 3bo9_A 20 TDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISE----LRQ-KTDKPFGVNIILVSPWA-DD 93 (326)
T ss_dssp HHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHH----HHT-TCSSCEEEEEETTSTTH-HH
T ss_pred HHhcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHH----HHH-hcCCCEEEEEeccCCCH-HH
Confidence 34455 78999999999999999999999986 6677777665543221111 111 13579999999966543 33
Q ss_pred HHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 175 AAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 175 AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
.++ .++.|+|.|.+|+|||.. +++.+++ .+++|.+++. ..+.++.+.+.|+
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p~~--------------------~~~~l~~-~g~~v~~~v~-------s~~~a~~a~~~Ga 145 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNPTK--------------------YIRELKE-NGTKVIPVVA-------SDSLARMVERAGA 145 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCCHH--------------------HHHHHHH-TTCEEEEEES-------SHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCCCcHH--------------------HHHHHHH-cCCcEEEEcC-------CHHHHHHHHHcCC
Confidence 333 346799999999998842 2334443 3788888752 2345777889999
Q ss_pred cEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 254 SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 254 d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
|+|.++++...+..+ ...+|+.+.++++.+++||+++|||.+.+++.+++.. |||+|++|++++..++.
T Consensus 146 D~i~v~g~~~GG~~G--~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~-GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 146 DAVIAEGMESGGHIG--EVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFAL-GAEAVQMGTRFVASVES 214 (326)
T ss_dssp SCEEEECTTSSEECC--SSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH-TCSEEEESHHHHTBSSC
T ss_pred CEEEEECCCCCccCC--CccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh-CCCEEEechHHHcCccc
Confidence 999999876543222 1468999999999999999999999999999999985 99999999999998874
No 42
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.76 E-value=8.8e-18 Score=171.65 Aligned_cols=199 Identities=14% Similarity=0.080 Sum_probs=146.5
Q ss_pred CCcEEEccCCC--C----CcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHH
Q 013813 102 RPKLIVAPMVD--N----SELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNA 175 (436)
Q Consensus 102 ~~~i~lAPM~g--v----td~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~A 175 (436)
+.|+++|||++ + ++.+|++.|+++|+..++++ +++..+.+ ... . .+.|..+||+....+...+.
T Consensus 72 ~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss-~s~~~le~----i~~----~-~~~~~~fQly~~~~~~~~~~ 141 (380)
T 1p4c_A 72 SMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST-ASNMSIED----LAR----Q-CDGDLWFQLYVIHREIAQGM 141 (380)
T ss_dssp SSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECT-TCSSCHHH----HHH----H-CCSCEEEEECCSSHHHHHHH
T ss_pred CCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCc-cccCCHHH----HHh----c-cCCCeEEEEEechHHHHHHH
Confidence 56999999976 5 89999999999999999887 43333321 111 1 36789999986554444444
Q ss_pred HHHH-cCCCcEEEE--------------ecCCCch---hhh--------c--Ccccccc---cC---ChHHHHHHHHHHh
Q 013813 176 ARRV-EPYCDYVDI--------------NLGCPQR---IAR--------R--GNYGAFL---MD---NLPLVKSLVEKLA 221 (436)
Q Consensus 176 A~~v-~~g~D~IdL--------------N~GCP~~---~~~--------~--~~~Gs~L---l~---~p~~v~eIv~av~ 221 (436)
++.+ +.|+..+.| |.||+.+ ... + ...+.++ +. +|++..+++++++
T Consensus 142 i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~ 221 (380)
T 1p4c_A 142 VLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLR 221 (380)
T ss_dssp HHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHH
Confidence 5444 357877765 5688432 110 0 0112222 23 6777789999999
Q ss_pred cccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--ccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHH
Q 013813 222 LNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME 299 (436)
Q Consensus 222 ~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V--HgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~e 299 (436)
+.+++||.||.- .+.+.++.+.++|+|.|+| ||++. . ..+.++|+.+.++++.+++|||++|||.+.+
T Consensus 222 ~~~~~Pv~vkgv------~t~e~a~~a~~aGad~I~vs~~gg~~--~--d~~~~~~~~l~~v~~~~~~pVia~GGI~~~~ 291 (380)
T 1p4c_A 222 DLWPHKLLVKGL------LSAEDADRCIAEGADGVILSNHGGRQ--L--DCAISPMEVLAQSVAKTGKPVLIDSGFRRGS 291 (380)
T ss_dssp HHCCSEEEEEEE------CCHHHHHHHHHTTCSEEEECCGGGTS--C--TTCCCGGGTHHHHHHHHCSCEEECSSCCSHH
T ss_pred HhcCCCEEEEec------CcHHHHHHHHHcCCCEEEEcCCCCCc--C--CCCcCHHHHHHHHHHHcCCeEEEECCCCCHH
Confidence 999999999941 2345688899999999999 76642 1 2236789999999999999999999999999
Q ss_pred HHHHHHHhcCcceeeeehHHhh
Q 013813 300 DVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 300 da~~~l~~tGaDgVmIGRgal~ 321 (436)
|+.+++.. |||+||+||+++.
T Consensus 292 dv~kal~~-GAdaV~iGr~~l~ 312 (380)
T 1p4c_A 292 DIVKALAL-GAEAVLLGRATLY 312 (380)
T ss_dssp HHHHHHHT-TCSCEEESHHHHH
T ss_pred HHHHHHHh-CCcHhhehHHHHH
Confidence 99999985 9999999999975
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.75 E-value=3.6e-17 Score=163.51 Aligned_cols=188 Identities=15% Similarity=0.146 Sum_probs=139.8
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCccc-chhhccChhhhhhhhhccCCCCCEEEEecCC----CHHHHHHH
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLH-SRIFTESEKYRNEEFATCKEDRPLFVQFCAN----DPEILLNA 175 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temis-a~~l~~~~~~~~~~~~~~~~e~plivQL~g~----d~e~~~~A 175 (436)
+.||++|||.|+|+..++..+.+.|+ +++.+++.+ .+.+....+.... ..+.|+.|+++.+ +++ +.+.
T Consensus 15 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~-----~~~~p~~v~l~v~~~~~~~~-~~~~ 88 (328)
T 2gjl_A 15 EHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRE-----LTDRPFGVNLTLLPTQKPVP-YAEY 88 (328)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHH-----HCSSCCEEEEEECCCSSCCC-HHHH
T ss_pred CCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHH-----hcCCCeEEEEeccccccCcc-HHHH
Confidence 67999999999999999999999986 677777654 3333211111111 1257899999997 333 4444
Q ss_pred HHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCcc
Q 013813 176 ARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 176 A~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d 254 (436)
++. ++.|+|+|.+|+|||. ++++.+++. ++++.+++. +.+.++.+.+.|+|
T Consensus 89 ~~~~~~~g~d~V~~~~g~p~--------------------~~~~~l~~~-gi~vi~~v~-------t~~~a~~~~~~GaD 140 (328)
T 2gjl_A 89 RAAIIEAGIRVVETAGNDPG--------------------EHIAEFRRH-GVKVIHKCT-------AVRHALKAERLGVD 140 (328)
T ss_dssp HHHHHHTTCCEEEEEESCCH--------------------HHHHHHHHT-TCEEEEEES-------SHHHHHHHHHTTCS
T ss_pred HHHHHhcCCCEEEEcCCCcH--------------------HHHHHHHHc-CCCEEeeCC-------CHHHHHHHHHcCCC
Confidence 443 4569999999998872 234555544 788887752 13446778899999
Q ss_pred EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 255 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 255 ~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
+|.++|++..+..+.....+|+.++++++.+++||+++|||.+.+++.+++.. |||+|++||+++..+.
T Consensus 141 ~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~-GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 141 AVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALAL-GADAINMGTRFLATRE 209 (328)
T ss_dssp EEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHH-TCSEEEESHHHHTSSS
T ss_pred EEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc-CCCEEEECHHHHcCcc
Confidence 99999876542212112368999999999999999999999999999999985 9999999999999998
No 44
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.75 E-value=3.7e-18 Score=162.52 Aligned_cols=190 Identities=15% Similarity=0.165 Sum_probs=139.3
Q ss_pred EEccCCCCCcHHHHHHHH---HhCCCe--EEeCcccc-hhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHH
Q 013813 106 IVAPMVDNSELPFRMLCR---RYGAEA--AYTPMLHS-RIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRV 179 (436)
Q Consensus 106 ~lAPM~gvtd~~fR~l~~---~~Ga~l--~~Temisa-~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v 179 (436)
+|.|+ .|+.+||.+|+ +||++. ++++|+.. +..... . .... -.+.|+.+|+.++.+.+. .+.+
T Consensus 12 ~l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~~---v-~v~~--v~~~P~g~~~~~~k~~~~---~~A~ 80 (225)
T 1mzh_A 12 ALKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAKK---V-KVCC--VIGFPLGLNKTSVKVKEA---VEAV 80 (225)
T ss_dssp ECCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCSS---S-EEEE--EESTTTCCSCHHHHHHHH---HHHH
T ss_pred ccCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhcC---C-ceee--EecCCCCccchhhhHHHH---HHHH
Confidence 46887 68999999999 789987 67788764 332221 1 1011 114566667666554443 3345
Q ss_pred cCCCcEEE--EecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEe---ccCCChhhHHHHHHHHHHcCcc
Q 013813 180 EPYCDYVD--INLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI---RVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 180 ~~g~D~Id--LN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKi---Rlg~~~~d~~~~ak~le~aG~d 254 (436)
+.|+|+|| +|+|| .+.+ +++.+.+.++++++.++ |+.+|+ +.+++.++..++++.++++|+|
T Consensus 81 ~~Gad~Id~viN~g~----~~~~--------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 81 RDGAQELDIVWNLSA----FKSE--------KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HTTCSEEEEECCHHH----HHTT--------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred HcCCCEEEEEecHHH----HhcC--------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 68999999 79998 2222 34677888999999888 999999 7777878889999999999999
Q ss_pred EEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 255 LLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 255 ~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
+|.. +| +. +.+.++|+.++.+++.+ ++||+++|||+|++|+.++++. |||.|.++++ .++|++++
T Consensus 148 ~I~t--st--g~--~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~a-GA~~iG~s~~----~~i~~~~~ 214 (225)
T 1mzh_A 148 FIKT--ST--GF--APRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEA-GADRIGTSSG----ISIAEEFL 214 (225)
T ss_dssp EEEC--CC--SC--SSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT-TCSEEEESCH----HHHHHHHH
T ss_pred EEEE--CC--CC--CCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHh-CchHHHHccH----HHHHHHHH
Confidence 9922 22 21 23468999999999987 7999999999999999999985 9997766665 24555443
No 45
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.75 E-value=1.8e-17 Score=168.66 Aligned_cols=206 Identities=15% Similarity=0.159 Sum_probs=144.0
Q ss_pred CCcEEEccCCCCCcHHH------HHHHHHhCCCeEEeCcccc--hhhccChhhhhhhhhccCCCCCEEEEecC------C
Q 013813 102 RPKLIVAPMVDNSELPF------RMLCRRYGAEAAYTPMLHS--RIFTESEKYRNEEFATCKEDRPLFVQFCA------N 167 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~f------R~l~~~~Ga~l~~Temisa--~~l~~~~~~~~~~~~~~~~e~plivQL~g------~ 167 (436)
+.|+++|||.|.|+.++ +.+|+++|..+...||..+ +.-... .+ ..++...++.|++.++.+ .
T Consensus 59 ~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~-s~--~~vr~~ap~~~~~anlg~~ql~~~~ 135 (368)
T 3vkj_A 59 SVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARE-SF--AIVRKVAPTIPIIANLGMPQLVKGY 135 (368)
T ss_dssp SSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSH-HH--HHHHHHCSSSCEEEEEEGGGGGTTC
T ss_pred cCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHh-hH--HHHHHhCcCcceecCcCeeecCCCC
Confidence 66999999999999885 9999999999999999654 111111 11 111212356777755544 7
Q ss_pred CHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChH-HHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLP-LVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~-~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
+++.+.++++.+++++..|+||.+ ..+... .|. .+.. ...++++++++.+++||.||. +|+.. ..+.|+
T Consensus 136 ~~~~~~~av~~~~a~al~Ihln~~---~~~~~p-~g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~--s~~~A~ 205 (368)
T 3vkj_A 136 GLKEFQDAIQMIEADAIAVHLNPA---QEVFQP-EGE---PEYQIYALEKLRDISKELSVPIIVKE-SGNGI--SMETAK 205 (368)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCHH---HHHHSS-SCC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCC--CHHHHH
T ss_pred CHHHHHHHHHHhcCCCeEEEecch---hhhhCC-CCC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCCC--CHHHHH
Confidence 899999999888767777777743 222211 111 1112 367788999999999999996 54432 245688
Q ss_pred HHHHcCccEEEe--ccCc--------ccccC------CCC-----CccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHH
Q 013813 247 MLEDAGCSLLAV--HGRT--------RDEKD------GKK-----FRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 247 ~le~aG~d~I~V--HgRt--------~~~~~------~~~-----g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~ 304 (436)
.++++|+|+|+| ||+| +.... .+. +.+....+.++++.+ ++|||++|||.+..|+.++
T Consensus 206 ~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~ka 285 (368)
T 3vkj_A 206 LLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKA 285 (368)
T ss_dssp HHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHH
Confidence 999999999999 5554 11000 000 122236677888887 5999999999999999999
Q ss_pred HHhcCcceeeeehHHhh
Q 013813 305 LEETGCEGVLSAESLLE 321 (436)
Q Consensus 305 l~~tGaDgVmIGRgal~ 321 (436)
+.. |||+||+||+++.
T Consensus 286 l~l-GA~~v~ig~~~l~ 301 (368)
T 3vkj_A 286 IAL-GADIAGMALPVLK 301 (368)
T ss_dssp HHH-TCSEEEECHHHHH
T ss_pred HHc-CCCEEEEcHHHHH
Confidence 996 9999999997654
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.73 E-value=1.6e-16 Score=161.46 Aligned_cols=193 Identities=17% Similarity=0.188 Sum_probs=142.1
Q ss_pred CCcEEEccCCC-CCcHHHHHHHHHhCC-CeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHH---------
Q 013813 102 RPKLIVAPMVD-NSELPFRMLCRRYGA-EAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPE--------- 170 (436)
Q Consensus 102 ~~~i~lAPM~g-vtd~~fR~l~~~~Ga-~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e--------- 170 (436)
+.||++|||++ +|+..|+..+.+.|+ +++.++|++.+.+.......... .+.|+.|||+.+.+.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~-----~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGL-----TGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHH-----CCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHh-----CCCCeEEEEecCCCCcccHHHHHH
Confidence 67999999995 999999999999987 77888888876654332222221 236999999987542
Q ss_pred -------------------------HHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc
Q 013813 171 -------------------------ILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL 224 (436)
Q Consensus 171 -------------------------~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~ 224 (436)
.+.+.++.+ +.++|.|.+|+|||. .++++.+++ .
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~-------------------~~~i~~~~~-~ 144 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD-------------------REVIARLRR-A 144 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC-------------------HHHHHHHHH-T
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc-------------------HHHHHHHHH-C
Confidence 123334433 568999999999984 123444444 3
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCC----CCc----cC-HHHHHHHHhhCCCcEEEccCC
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGK----KFR----AD-WNAIKAVKNALRIPVLANGNV 295 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~----~g~----ad-~~~i~~ik~~~~iPVianGGI 295 (436)
+++|.+++. + .+.++.+++.|+|+|.++++...+..+. ..+ .. |+.++++++.+++||++.|||
T Consensus 145 g~~v~~~v~---t----~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI 217 (369)
T 3bw2_A 145 GTLTLVTAT---T----PEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGI 217 (369)
T ss_dssp TCEEEEEES---S----HHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSC
T ss_pred CCeEEEECC---C----HHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCC
Confidence 788888752 2 3347788899999999987653211110 000 23 899999999899999999999
Q ss_pred CCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 296 RHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 296 ~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
.+++++.++++. |||+|++||+++.+|+...
T Consensus 218 ~~~~~~~~~l~~-GAd~V~vGs~~~~~~e~~~ 248 (369)
T 3bw2_A 218 MRGGQIAAVLAA-GADAAQLGTAFLATDESGA 248 (369)
T ss_dssp CSHHHHHHHHHT-TCSEEEESHHHHTSTTCCC
T ss_pred CCHHHHHHHHHc-CCCEEEEChHHhCCcccCc
Confidence 999999999985 9999999999999998753
No 47
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.73 E-value=5.2e-17 Score=163.26 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=139.9
Q ss_pred CCcEEEccCCCCCcHHHHH-HHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHc
Q 013813 102 RPKLIVAPMVDNSELPFRM-LCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~-l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~ 180 (436)
+.||++|||.++|+..|+. +++..|.++++++|.... ...... .+ ..+.|+.+|+ |.+++.+..+..+++
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~-----~~~i~~-~~--~~g~~v~v~~-g~~~~~~~~a~~~~~ 116 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKR-----ISFIRD-MQ--SRGLIASISV-GVKEDEYEFVQQLAA 116 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGH-----HHHHHH-HH--HTTCCCEEEE-CCSHHHHHHHHHHHH
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHH-----HHHHHH-HH--hcCCeEEEeC-CCCHHHHHHHHHHHh
Confidence 6799999999999999965 566667788888765321 111111 11 1345899995 778888877666677
Q ss_pred CC--CcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe
Q 013813 181 PY--CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV 258 (436)
Q Consensus 181 ~g--~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V 258 (436)
.+ ++.|++|++. | ++....++++++++.++.|+.+|-.. ...+.|+.+.++|+|+|++
T Consensus 117 ~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~v-----~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 117 EHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAGNV-----GTPEAVRELENAGADATKV 176 (336)
T ss_dssp TTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEEEE-----CSHHHHHHHHHHTCSEEEE
T ss_pred cCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEECCc-----CCHHHHHHHHHcCCCEEEE
Confidence 77 9999999742 2 57788899999999886444444111 1235788999999999999
Q ss_pred --ccCccc-cc-CCCCCcc--CHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 259 --HGRTRD-EK-DGKKFRA--DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 259 --HgRt~~-~~-~~~~g~a--d~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
|+++.. .. ..+.+.+ .++.+.++++.+++|||++|||.+..|+.+++.. |||+||+||+++.-
T Consensus 177 s~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kalal-GAdaV~iGr~~l~t 245 (336)
T 1ypf_A 177 GIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSIRF-GATMVMIGSLFAGH 245 (336)
T ss_dssp CSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHHHT-TCSEEEESGGGTTC
T ss_pred ecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHc-CCCEEEeChhhhcc
Confidence 664321 00 0111223 5888999999999999999999999999999986 99999999999964
No 48
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.2e-16 Score=155.21 Aligned_cols=182 Identities=14% Similarity=0.145 Sum_probs=134.0
Q ss_pred HHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhc
Q 013813 120 MLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARR 199 (436)
Q Consensus 120 ~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~ 199 (436)
+...+.|++.++.-++++ .+.+....... ..++-+|++|.-.. . ++.+++ .|+|.|-
T Consensus 45 ~~~~~~Ga~~l~vvDL~~----~n~~~i~~i~~----~~~~pv~vgGGir~-~-~~~~~l-~Ga~~Vi------------ 101 (260)
T 2agk_A 45 KLYKDRDVQGCHVIKLGP----NNDDAAREALQ----ESPQFLQVGGGIND-T-NCLEWL-KWASKVI------------ 101 (260)
T ss_dssp HHHHHTTCTTCEEEEESS----SCHHHHHHHHH----HSTTTSEEESSCCT-T-THHHHT-TTCSCEE------------
T ss_pred HHHHHcCCCEEEEEeCCC----CCHHHHHHHHh----cCCceEEEeCCCCH-H-HHHHHh-cCCCEEE------------
Confidence 455666998888777765 22222222111 23455778887763 4 777888 9999775
Q ss_pred CcccccccCC-----hHHHHHHHHHHh-cccCccEEEEec---------cCCCh---hhHH-HHHHHHHHcCccEEEecc
Q 013813 200 GNYGAFLMDN-----LPLVKSLVEKLA-LNLNVPVSCKIR---------VFPNL---QDTI-KYAKMLEDAGCSLLAVHG 260 (436)
Q Consensus 200 ~~~Gs~Ll~~-----p~~v~eIv~av~-~~~~iPVsVKiR---------lg~~~---~d~~-~~ak~le~aG~d~I~VHg 260 (436)
.|++++++ |+++.++++.+. +.+-+++.+|++ .||.. .++. ++++.+++. ++.|++|+
T Consensus 102 --igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~ 178 (260)
T 2agk_A 102 --VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHA 178 (260)
T ss_dssp --ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC
T ss_pred --ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEe
Confidence 46778888 999999999997 554455555533 14532 2456 899999999 99999999
Q ss_pred CcccccCCCCCccCHHHHHHHHhhC----CCcEEEccCCCCHHHHHHHHHhc-CcceeeeehHH--hhCC-ccchhhh
Q 013813 261 RTRDEKDGKKFRADWNAIKAVKNAL----RIPVLANGNVRHMEDVQKCLEET-GCEGVLSAESL--LENP-ALFAGFR 330 (436)
Q Consensus 261 Rt~~~~~~~~g~ad~~~i~~ik~~~----~iPVianGGI~s~eda~~~l~~t-GaDgVmIGRga--l~nP-~lf~~i~ 330 (436)
+++++++. | +||+.++++++.+ ++|||++|||.|++|++++++.+ ||++||+||++ +.++ |.|.++.
T Consensus 179 i~~dG~~~--G-~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 179 ADVEGLCG--G-IDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCC 253 (260)
T ss_dssp -------C--C-CCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHH
T ss_pred eccccCcC--C-CCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHH
Confidence 99987643 3 5999999999999 99999999999999999999987 99999999997 9999 9998765
No 49
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.66 E-value=9.9e-16 Score=155.48 Aligned_cols=205 Identities=16% Similarity=0.183 Sum_probs=124.2
Q ss_pred CCcEEEccCCCCCcHH------HHHHHHHhCCCeEEeCcccchhhccChhh-hhhhhhccCCCCCEEEEecCCCH-HHHH
Q 013813 102 RPKLIVAPMVDNSELP------FRMLCRRYGAEAAYTPMLHSRIFTESEKY-RNEEFATCKEDRPLFVQFCANDP-EILL 173 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~------fR~l~~~~Ga~l~~Temisa~~l~~~~~~-~~~~~~~~~~e~plivQL~g~d~-e~~~ 173 (436)
+.|+++|||.+.++.+ |++.|+++|......+|..+ + ++... .....+. .++.+++.+|.+..+ ++..
T Consensus 86 ~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~--l-e~~~~~~~~v~r~-~P~~~~ianig~~~~~e~~~ 161 (365)
T 3sr7_A 86 DFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA--L-KNPDDTSYQVKKS-RPHLLLATNIGLDKPYQAGL 161 (365)
T ss_dssp SSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC---------------------------CCEEEEEETTSCHHHHH
T ss_pred cCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc--c-cCccccceEehhh-CCCCcEEEEeCCCCCHHHHH
Confidence 6799999999999866 99999999999988888642 1 11111 1111122 257899999986543 3333
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
++++.+ ++|++.||+...+..+... | -.+.+-..+.|+++++.+++||.||. +|.. ...+.|+.+.++|+
T Consensus 162 ~~ve~~--~adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g--~s~e~A~~l~~aGa 231 (365)
T 3sr7_A 162 QAVRDL--QPLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAKKLQLPFILKE-VGFG--MDVKTIQTAIDLGV 231 (365)
T ss_dssp HHHHHH--CCSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSC--CCHHHHHHHHHHTC
T ss_pred HHHHhc--CCCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCC--CCHHHHHHHHHcCC
Confidence 433333 6677766655333222222 1 12344567889999999999999994 4332 22356888999999
Q ss_pred cEEEeccCccccc-----C---CCC-----CccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 254 SLLAVHGRTRDEK-----D---GKK-----FRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 254 d~I~VHgRt~~~~-----~---~~~-----g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
|+|+|+|+..... . .+. +.+....+..++... ++|||++|||.+..|+.++|.. |||+||+||++
T Consensus 232 d~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLal-GAdaV~ig~~~ 310 (365)
T 3sr7_A 232 KTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVL-GAKAVGLSRTM 310 (365)
T ss_dssp CEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHH-TCSEEEESHHH
T ss_pred CEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHc-CCCEEEECHHH
Confidence 9999976522110 0 001 122235566654432 7999999999999999999985 99999999976
Q ss_pred hh
Q 013813 320 LE 321 (436)
Q Consensus 320 l~ 321 (436)
+.
T Consensus 311 l~ 312 (365)
T 3sr7_A 311 LE 312 (365)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 50
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.65 E-value=5.4e-16 Score=165.64 Aligned_cols=207 Identities=15% Similarity=0.122 Sum_probs=143.4
Q ss_pred HHHHh---CCC-eEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHH----------HHHHHHHHHcCCCcEE
Q 013813 121 LCRRY---GAE-AAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPE----------ILLNAARRVEPYCDYV 186 (436)
Q Consensus 121 l~~~~---Ga~-l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e----------~~~~AA~~v~~g~D~I 186 (436)
+++.| |++ +.+.++-.++....+.......++.-....++-+|++|.-.+ .+..+.++++.|+|.|
T Consensus 285 ~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V 364 (555)
T 1jvn_A 285 LAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKV 364 (555)
T ss_dssp HHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEE
Confidence 45545 885 567776544321111100111122222335667888887643 2344556678899999
Q ss_pred EEecCCCchhhhcCcccccccCChHHHHHHHHHHhc-ccCccEEEEe--------------------------------c
Q 013813 187 DINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNVPVSCKI--------------------------------R 233 (436)
Q Consensus 187 dLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~-~~~iPVsVKi--------------------------------R 233 (436)
.||.+| ..+..+-..++.++.+|+++.++.+...+ .+-+-+.+|. .
T Consensus 365 ~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 443 (555)
T 1jvn_A 365 SIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTI 443 (555)
T ss_dssp EECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEE
T ss_pred EECCHH-hhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEEEE
Confidence 999998 33222222244568899999999998753 2212222221 1
Q ss_pred cCCCh---hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCc
Q 013813 234 VFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 310 (436)
Q Consensus 234 lg~~~---~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGa 310 (436)
.||.. .++.++++.++++|++.|++|++++++... .+||+.++++++.+++|||++|||.|++|+.++++.+||
T Consensus 444 ~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~---G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~ 520 (555)
T 1jvn_A 444 KGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNS---GYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRA 520 (555)
T ss_dssp TTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCS---CCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCC
T ss_pred ecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCC---CCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCC
Confidence 13432 357899999999999999999999987643 369999999999999999999999999999999986799
Q ss_pred ceeeeehHHhhCCccchhhhh
Q 013813 311 EGVLSAESLLENPALFAGFRT 331 (436)
Q Consensus 311 DgVmIGRgal~nP~lf~~i~~ 331 (436)
|+||+||+++.++|.|.+++.
T Consensus 521 ~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 521 DACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp SEEEESHHHHTTSCCHHHHHH
T ss_pred hHHHHHHHHHcCCCCHHHHHH
Confidence 999999999999999998764
No 51
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.64 E-value=2.2e-15 Score=154.80 Aligned_cols=201 Identities=15% Similarity=0.133 Sum_probs=137.1
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhh-hhh-------------------------------
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKY-RNE------------------------------- 149 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~-~~~------------------------------- 149 (436)
+.||++|||.++++..+...+.+.|+-.+..-+++.+.+...... ...
T Consensus 42 ~~Pii~Apm~~~~~~ela~a~a~aGglg~i~~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 121 (404)
T 1eep_A 42 NIPFLSSAMDTVTESQMAIAIAKEGGIGIIHKNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDA 121 (404)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHTCC------------------------------
T ss_pred CCCEEeCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHhhccCCCceeccccccccccccccCCCCCHHHH
Confidence 669999999999999999988888763333333333221111000 000
Q ss_pred --------hhh----ccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHH
Q 013813 150 --------EFA----TCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLV 217 (436)
Q Consensus 150 --------~~~----~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv 217 (436)
.+. ......++++++... ++....+...++.|+|.|+||+++ | +++.+.+++
T Consensus 122 ~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~~~~~a~~~~~~G~d~i~i~~~~----------g-----~~~~~~e~i 185 (404)
T 1eep_A 122 YKNAEHKEDFPNACKDLNNKLRVGAAVSID-IDTIERVEELVKAHVDILVIDSAH----------G-----HSTRIIELI 185 (404)
T ss_dssp --------CCTTCCBCTTSCBCCEEEECSC-TTHHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHH
T ss_pred HHHHHHhhhcchhhhhcccCceEEEEeCCC-hhHHHHHHHHHHCCCCEEEEeCCC----------C-----ChHHHHHHH
Confidence 000 000122467888653 344555555667899999999654 1 468889999
Q ss_pred HHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEec------cCcccccCCCCCccCHHHHHHHHh---hCCC
Q 013813 218 EKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVH------GRTRDEKDGKKFRADWNAIKAVKN---ALRI 287 (436)
Q Consensus 218 ~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VH------gRt~~~~~~~~g~ad~~~i~~ik~---~~~i 287 (436)
+++++.+ ++||.++.- . ..+.++.++++|+|+|+|. .++... . ..+..+++.+..+++ .+++
T Consensus 186 ~~ir~~~~~~pviv~~v--~----~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~-~-~~g~p~~~~l~~v~~~~~~~~i 257 (404)
T 1eep_A 186 KKIKTKYPNLDLIAGNI--V----TKEAALDLISVGADCLKVGIGPGSICTTRIV-A-GVGVPQITAICDVYEACNNTNI 257 (404)
T ss_dssp HHHHHHCTTCEEEEEEE--C----SHHHHHHHHTTTCSEEEECSSCSTTSHHHHH-H-CCCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHCCCCeEEEcCC--C----cHHHHHHHHhcCCCEEEECCCCCcCcCcccc-C-CCCcchHHHHHHHHHHHhhcCc
Confidence 9999988 899998521 1 2456888999999999992 111110 1 112346777777665 4689
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
|||++|||.+.+|+.+++.. |||+|++||+++..|+...
T Consensus 258 pVia~GGI~~~~d~~~ala~-GAd~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 258 CIIADGGIRFSGDVVKAIAA-GADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp EEEEESCCCSHHHHHHHHHH-TCSEEEECHHHHTBTTSSS
T ss_pred eEEEECCCCCHHHHHHHHHc-CCCHHhhCHHHhcCCCCCc
Confidence 99999999999999999996 9999999999999988754
No 52
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.59 E-value=1e-14 Score=138.96 Aligned_cols=153 Identities=20% Similarity=0.253 Sum_probs=123.1
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc----Ccc-----
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL----NVP----- 227 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~----~iP----- 227 (436)
+.|+++-.+-.+++++. ..++.|+|.|-++ +.++.+|+.+.++++.+...+ +..
T Consensus 74 ~ipv~v~ggi~~~~~~~---~~l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~ 136 (244)
T 2y88_A 74 DVQVELSGGIRDDESLA---AALATGCARVNVG--------------TAALENPQWCARVIGEHGDQVAVGLDVQIIDGE 136 (244)
T ss_dssp SSEEEEESSCCSHHHHH---HHHHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTE
T ss_pred CCcEEEECCCCCHHHHH---HHHHcCCCEEEEC--------------chHhhChHHHHHHHHHcCCCEEEEEeccccCCC
Confidence 67888887778888633 3345789998764 556778999999999876443 222
Q ss_pred EEEEeccCCC--hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 228 VSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 228 VsVKiRlg~~--~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
.+||+| +|. ..+..++++.+++.|++.|.+|+|+..+... ..+|+.++++++.+++||+++|||.+++|+.+++
T Consensus 137 ~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~---g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~ 212 (244)
T 2y88_A 137 HRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLG---GPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIA 212 (244)
T ss_dssp EEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTS---CCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHH
T ss_pred CEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccC---CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHH
Confidence 357777 553 1267888999999999999999999875432 3599999999999999999999999999999999
Q ss_pred Hhc--CcceeeeehHHhhCCccchhhh
Q 013813 306 EET--GCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 306 ~~t--GaDgVmIGRgal~nP~lf~~i~ 330 (436)
+.+ |||+||+||+++.+|+.|.++.
T Consensus 213 ~~~~~Gad~v~vG~al~~~~~~~~~~~ 239 (244)
T 2y88_A 213 TLTHRGVEGAIVGKALYARRFTLPQAL 239 (244)
T ss_dssp TTGGGTEEEEEECHHHHTTSSCHHHHH
T ss_pred hhccCCCCEEEEcHHHHCCCcCHHHHH
Confidence 866 9999999999999999998765
No 53
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.59 E-value=4.6e-15 Score=149.64 Aligned_cols=242 Identities=17% Similarity=0.142 Sum_probs=157.0
Q ss_pred CCcEEEccCCCCC------cHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCC-CHHHHHH
Q 013813 102 RPKLIVAPMVDNS------ELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCAN-DPEILLN 174 (436)
Q Consensus 102 ~~~i~lAPM~gvt------d~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~-d~e~~~~ 174 (436)
..|+++||+.... +...-+.|.+.|.-.+.+-+-+. .+ +. +.....+.|..+||.-. |.+...+
T Consensus 69 ~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~-s~----e~----v~~~~~~~~~wfQlY~~~d~~~~~~ 139 (352)
T 3sgz_A 69 SAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASY-SL----ED----IVAAAPEGFRWFQLYMKSDWDFNKQ 139 (352)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSS-CH----HH----HHHHSTTCEEEEECCCCSCHHHHHH
T ss_pred CCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCC-CH----HH----HHHhccCccceeccccCCCHHHHHH
Confidence 4689999987644 45556667777765554433221 11 11 11113457899999765 4555555
Q ss_pred HHHHHc-CCCcEEEEecCCCch-hhh---cCcc-------------------ccc---ccCChHHHHHHHHHHhcccCcc
Q 013813 175 AARRVE-PYCDYVDINLGCPQR-IAR---RGNY-------------------GAF---LMDNLPLVKSLVEKLALNLNVP 227 (436)
Q Consensus 175 AA~~v~-~g~D~IdLN~GCP~~-~~~---~~~~-------------------Gs~---Ll~~p~~v~eIv~av~~~~~iP 227 (436)
-.++++ .||.+|=+....|.. +.. +.++ ++. -.-++.+.-+.++++++.+++|
T Consensus 140 l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~P 219 (352)
T 3sgz_A 140 MVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLP 219 (352)
T ss_dssp HHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSC
T ss_pred HHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCC
Confidence 557765 599999998887762 111 1001 111 1235666778899999999999
Q ss_pred EEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH
Q 013813 228 VSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 228 VsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l 305 (436)
|.||... + .+.|+.+.++|+|+|+|++....+. ..+++.++.+.++++.+ ++|||++|||.+..|+.++|
T Consensus 220 vivK~v~--~----~e~A~~a~~~GaD~I~vsn~GG~~~--d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaL 291 (352)
T 3sgz_A 220 IILKGIL--T----KEDAELAMKHNVQGIVVSNHGGRQL--DEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKAL 291 (352)
T ss_dssp EEEEEEC--S----HHHHHHHHHTTCSEEEECCGGGTSS--CSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH
T ss_pred EEEEecC--c----HHHHHHHHHcCCCEEEEeCCCCCcc--CCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHH
Confidence 9999763 2 3558889999999999955433222 23467899999999887 79999999999999999999
Q ss_pred HhcCcceeeeehHHhhCCccchhhhhhhhccCCcccCCCCHHHHHHHHHHHHHH-HHhCCC-hhHHHHHHHHH
Q 013813 306 EETGCEGVLSAESLLENPALFAGFRTAEWIVGSEEISKDGNLDQADLLVEYLKL-CEKYPV-PWRMIRSHVHK 376 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~lf~~i~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~~~~~-~~~~~R~hl~~ 376 (436)
.. |||+|||||+++..... .+ + ....+.++.+.++++. +...+. .+..+++++.|
T Consensus 292 al-GA~aV~iGr~~l~~l~~-----~G------~----~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~ 348 (352)
T 3sgz_A 292 AL-GARCIFLGRPILWGLAC-----KG------E----DGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQ 348 (352)
T ss_dssp HT-TCSEEEESHHHHHHHHH-----HH------H----HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBS
T ss_pred Hc-CCCEEEECHHHHHHHHh-----cC------c----HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcch
Confidence 86 99999999987643321 11 1 1123445666666653 333332 24555665443
No 54
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.57 E-value=5.1e-14 Score=142.88 Aligned_cols=193 Identities=18% Similarity=0.130 Sum_probs=133.5
Q ss_pred CCcEEEccCCCCCcHHHHHH-HHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHc
Q 013813 102 RPKLIVAPMVDNSELPFRML-CRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l-~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~ 180 (436)
+.||+.|||.++|+..+... ++..|.+++... .+...+... . ..++. ....|+.++++.++ ...+..+++
T Consensus 45 ~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~-~s~e~~~~~---I-~~vk~-~~~~pvga~ig~~~---~e~a~~l~e 115 (361)
T 3khj_A 45 KIPLISSAMDTVTEHLMAVGMARLGGIGIIHKN-MDMESQVNE---V-LKVKN-SGGLRVGAAIGVNE---IERAKLLVE 115 (361)
T ss_dssp SSSEEECSSTTTCSHHHHHHHHHTTCEEEECSS-SCHHHHHHH---H-HHHHH-TTCCCCEEEECTTC---HHHHHHHHH
T ss_pred CCCEEeecCCCCCcHHHHHHHHHcCCCeEEecC-CCHHHHHHH---H-HHHHh-ccCceEEEEeCCCH---HHHHHHHHH
Confidence 55899999999999999884 444444555432 222211110 0 11111 24578999998776 333334567
Q ss_pred CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEecc
Q 013813 181 PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHG 260 (436)
Q Consensus 181 ~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHg 260 (436)
.|+|.|.||.+. | +++.+.+.++++++.+++||.++.- .+.+.++.+.++|+|+|.|..
T Consensus 116 aGad~I~ld~a~----------G-----~~~~~~~~i~~i~~~~~~~Vivg~v------~t~e~A~~l~~aGaD~I~VG~ 174 (361)
T 3khj_A 116 AGVDVIVLDSAH----------G-----HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEATKELIENGADGIKVGI 174 (361)
T ss_dssp TTCSEEEECCSC----------C-----SBHHHHHHHHHHHHHCCCEEEEEEE------CSHHHHHHHHHTTCSEEEECS
T ss_pred cCcCeEEEeCCC----------C-----CcHHHHHHHHHHHHhcCCcEEEccC------CCHHHHHHHHHcCcCEEEEec
Confidence 899999999642 1 4577788889888888999998632 224557889999999999831
Q ss_pred ------CcccccCCCCCccCHHHHHHHHh---hCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 261 ------RTRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 261 ------Rt~~~~~~~~g~ad~~~i~~ik~---~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
.++.. ...+.+++..+.++++ .+++|||+.|||.+.+|+.+++.. |||+||+|++++..++...
T Consensus 175 ~~Gs~~~tr~~--~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~~~~t~Esp~ 247 (361)
T 3khj_A 175 GPGSICTTRIV--AGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTEESPG 247 (361)
T ss_dssp SCCTTCCHHHH--TCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHH-TCSEEEESTTTTTBTTSSC
T ss_pred CCCcCCCcccc--cCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHc-CCCEEEEChhhhcCCcCCc
Confidence 11110 1122456777777754 468999999999999999999997 9999999999999887443
No 55
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.52 E-value=1.3e-13 Score=131.39 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=117.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEE---e
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK---I 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVK---i 232 (436)
.+.|+++-.+-.+++++. ..++.|+|.|-++ +.++.+|+.+.++++.+...+.+.+.++ +
T Consensus 74 ~~ipv~v~ggI~~~~~~~---~~l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v 136 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDTLA---AALATGCTRVNLG--------------TAALETPEWVAKVIAEHGDKIAVGLDVRGTTL 136 (244)
T ss_dssp CSSEEEEESSCCSHHHHH---HHHHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEETTEE
T ss_pred cCCcEEEECCcCCHHHHH---HHHHcCCCEEEEC--------------chHhhCHHHHHHHHHHcCCcEEEEEEccCCEE
Confidence 367888887778888633 3345689988654 5567789999999988764444444443 1
Q ss_pred -ccCCCh--hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc-
Q 013813 233 -RVFPNL--QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET- 308 (436)
Q Consensus 233 -Rlg~~~--~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t- 308 (436)
+.+|.. .+..++++.+++.|++.|.+|++++++... ..+|+.++++++.+++||+++|||.+++++.++++.+
T Consensus 137 ~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~---g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~ 213 (244)
T 1vzw_A 137 RGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQ---GPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVP 213 (244)
T ss_dssp CCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC----------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGG
T ss_pred EEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccC---CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhcc
Confidence 124421 167888999999999999999988764322 3689999999999999999999999999999999866
Q ss_pred -CcceeeeehHHhhCCccchhhh
Q 013813 309 -GCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 309 -GaDgVmIGRgal~nP~lf~~i~ 330 (436)
|||+|++|++++.+||.|.++.
T Consensus 214 ~Gadgv~vG~al~~~~~~~~~~~ 236 (244)
T 1vzw_A 214 AGVEGAIVGKALYAKAFTLEEAL 236 (244)
T ss_dssp GTEEEEEECHHHHTTSSCHHHHH
T ss_pred CCCceeeeeHHHHcCCCCHHHHH
Confidence 9999999999999999987664
No 56
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.50 E-value=1.7e-13 Score=138.77 Aligned_cols=191 Identities=17% Similarity=0.175 Sum_probs=128.2
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcC
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEP 181 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~ 181 (436)
+.||++|||..+|+..+...+.+.|.-.+.+.+.+.+.+. ..... ....+.+.+ |...+....+.++++.
T Consensus 42 ~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~-------~~i~~--~~~~~~~~~-g~~~~~~e~~~~a~~a 111 (361)
T 3r2g_A 42 NLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENI-------QEFKK--CKGPVFVSV-GCTENELQRAEALRDA 111 (361)
T ss_dssp SSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHH-------HHHHT--CCSCCBEEE-CSSHHHHHHHHHHHHT
T ss_pred CCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHH-------HHHhh--cceEEEEEc-CCCHHHHHHHHHHHHc
Confidence 5689999999999999999999998644444443322221 11111 112233333 3334444444455677
Q ss_pred CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--
Q 013813 182 YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV-- 258 (436)
Q Consensus 182 g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V-- 258 (436)
|+|.|.|+..+.. ++.+.++++++++.. ++||.+|--. + .+.|+.+.++|+|+|.|
T Consensus 112 GvdvI~id~a~G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V~--T----~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 112 GADFFCVDVAHAH---------------AKYVGKTLKSLRQLLGSRCIMAGNVA--T----YAGADYLASCGADIIKAGI 170 (361)
T ss_dssp TCCEEEEECSCCS---------------SHHHHHHHHHHHHHHTTCEEEEEEEC--S----HHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEeCCCCC---------------cHhHHHHHHHHHHhcCCCeEEEcCcC--C----HHHHHHHHHcCCCEEEEcC
Confidence 9999999864421 245678888998876 7999997211 2 34578899999999998
Q ss_pred ccC-ccccc-CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 259 HGR-TRDEK-DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 259 HgR-t~~~~-~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
|+. ..... ..+.+.+.+..|.++++... |||+.|||.+..|+.++|.. |||+||+||.++...+.
T Consensus 171 g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~-GAd~V~iGr~f~~t~Es 237 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAF-GADFVMIGGMLAGSAPT 237 (361)
T ss_dssp SSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHT-TCSEEEESGGGTTBTTS
T ss_pred CCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHc-CCCEEEEChHHhCCccC
Confidence 332 11100 00112346677777766555 99999999999999999996 99999999999887653
No 57
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.50 E-value=2e-14 Score=137.70 Aligned_cols=153 Identities=18% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHh-cccCccE-------
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLA-LNLNVPV------- 228 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~-~~~~iPV------- 228 (436)
..|+++.=+-.+++++.++ ++.|+|+|- .|..++.+|+++.++.+.+. +.+-+.+
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~---l~~Gad~V~--------------ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~ 141 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEA---FLRGADKVS--------------INTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 141 (247)
T ss_dssp CSCEEEESCCCSHHHHHHH---HHTTCSEEC--------------CSHHHHHCTHHHHHHHHHHC---------------
T ss_pred CCCEEEeCCCCCHHHHHHH---HHcCCCeee--------------hhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 5788776545677765444 456889874 46777889999999988773 3221222
Q ss_pred --EEEeccCCC---hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHH
Q 013813 229 --SCKIRVFPN---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQK 303 (436)
Q Consensus 229 --sVKiRlg~~---~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~ 303 (436)
.|+++ ||. ..+..++++.+++.|++.|.+|++++++... .++|+.++++++.+++|||++|||.|++|+.+
T Consensus 142 ~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~---g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~ 217 (247)
T 3tdn_A 142 EFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 217 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcC---CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHH
Confidence 34444 433 2356788999999999999999988765432 36899999999999999999999999999999
Q ss_pred HHHhcCcceeeeehHHhhCCccchhhhh
Q 013813 304 CLEETGCEGVLSAESLLENPALFAGFRT 331 (436)
Q Consensus 304 ~l~~tGaDgVmIGRgal~nP~lf~~i~~ 331 (436)
+++. |||+|++||+++.+||+|.+++.
T Consensus 218 ~~~~-Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 218 AFLR-GADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp ----------------------------
T ss_pred HHHc-CCcHhhccHHHHcCcHHHHHHHH
Confidence 9987 89999999999999999998763
No 58
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=8.1e-13 Score=135.18 Aligned_cols=203 Identities=15% Similarity=0.131 Sum_probs=132.1
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCcccchh---------hcc----------------------Chhhhhh
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLHSRI---------FTE----------------------SEKYRNE 149 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temisa~~---------l~~----------------------~~~~~~~ 149 (436)
+.||++|||.++++..+.+.+.+.|+ +++.|||+..+. +.. +......
T Consensus 67 ~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~ 146 (393)
T 2qr6_A 67 DLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSE 146 (393)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHH
Confidence 67999999999999999888888876 778887743321 000 0000000
Q ss_pred hhh-ccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccE
Q 013813 150 EFA-TCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPV 228 (436)
Q Consensus 150 ~~~-~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPV 228 (436)
.++ ..+.+.++++.+.+.+..++++.+ .+.|+|.|.++ +.|.. ..++..-. .++ + +.++++.+++||
T Consensus 147 ~i~~~~~~g~~v~~~v~~~~~~e~a~~~--~~agad~i~i~-~~~~~----~~~~~~~~-~~~---~-i~~l~~~~~~pv 214 (393)
T 2qr6_A 147 RIAQVRDSGEIVAVRVSPQNVREIAPIV--IKAGADLLVIQ-GTLIS----AEHVNTGG-EAL---N-LKEFIGSLDVPV 214 (393)
T ss_dssp HHHHHHHTTSCCEEEECTTTHHHHHHHH--HHTTCSEEEEE-CSSCC----SSCCCC---------C-HHHHHHHCSSCE
T ss_pred HHHHHhhcCCeEEEEeCCccHHHHHHHH--HHCCCCEEEEe-CCccc----cccCCCcc-cHH---H-HHHHHHhcCCCE
Confidence 000 011367888888887665544433 34689999888 33310 11221100 122 2 456666679999
Q ss_pred EEEeccCCChhhHHHHHHHHHHcCccEEEeccC--cccccCCCCCccCHHHHHHHHhh-------CC---CcEEEccCCC
Q 013813 229 SCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGR--TRDEKDGKKFRADWNAIKAVKNA-------LR---IPVLANGNVR 296 (436)
Q Consensus 229 sVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgR--t~~~~~~~~g~ad~~~i~~ik~~-------~~---iPVianGGI~ 296 (436)
.+|- ..+. +.++.+.++|+|+|.| ++ +........+.+.++.+.++++. ++ +|||++|||.
T Consensus 215 i~gg--i~t~----e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~ 287 (393)
T 2qr6_A 215 IAGG--VNDY----TTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIE 287 (393)
T ss_dssp EEEC--CCSH----HHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC
T ss_pred EECC--cCCH----HHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC
Confidence 9972 2232 3367788999999999 44 11111112235677888877776 54 9999999999
Q ss_pred CHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 297 HMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 297 s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
+..|+.++|.. |||+||+||+++..+.
T Consensus 288 ~~~dv~kalal-GA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 288 NSGDVVKAIAC-GADAVVLGSPLARAEE 314 (393)
T ss_dssp SHHHHHHHHHH-TCSEEEECGGGGGSTT
T ss_pred CHHHHHHHHHc-CCCEEEECHHHHcCCC
Confidence 99999999986 9999999999999887
No 59
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.48 E-value=2.4e-13 Score=131.53 Aligned_cols=138 Identities=21% Similarity=0.325 Sum_probs=104.8
Q ss_pred HHHHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCcc
Q 013813 176 ARRVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 176 A~~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d 254 (436)
|++.++ |+.+|-...+||......| |.+-|.+|+.+.+| ++++++||.-|.|.|. ..-|+.++++|+|
T Consensus 24 a~iae~aGa~av~~l~~~p~d~r~~g--Gv~Rm~dp~~I~~I----~~aVsIPVm~k~righ-----~~EAqilea~GaD 92 (291)
T 3o07_A 24 AKIAEKSGACAVMALESIPADMRKSG--KVCRMSDPKMIKDI----MNSVSIPVMAKVRIGH-----FVEAQIIEALEVD 92 (291)
T ss_dssp HHHHHHHTCSEEEECSSCHHHHHTTT--CCCCCCCHHHHHHH----HTTCSSCEEEEEETTC-----HHHHHHHHHTTCS
T ss_pred HHHHHHhCchhhhhccCCCchhhhcC--CccccCCHHHHHHH----HHhCCCCeEEEEecCc-----HHHHHHHHHcCCC
Confidence 444443 8999999999999866544 78899999887665 6777999999999976 3336778888888
Q ss_pred EEEecc-----------------------------------------Ccccc----------------------cCCC--
Q 013813 255 LLAVHG-----------------------------------------RTRDE----------------------KDGK-- 269 (436)
Q Consensus 255 ~I~VHg-----------------------------------------Rt~~~----------------------~~~~-- 269 (436)
+|.-+- ||... ..++
T Consensus 93 ~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t 172 (291)
T 3o07_A 93 YIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKS 172 (291)
T ss_dssp EEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCC
T ss_pred EEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCC
Confidence 774311 11000 0011
Q ss_pred ---------CCccCHHHHHHHHhhCCCcE--EEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 270 ---------KFRADWNAIKAVKNALRIPV--LANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 270 ---------~g~ad~~~i~~ik~~~~iPV--ianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
...++|+.++++++.+++|| |+||||.|++|+.++++ +|||+||||||++..++.
T Consensus 173 ~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le-~GaDGVmVGrAI~~s~DP 238 (291)
T 3o07_A 173 EDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQ-LGCDGVFVGSGIFKSSNP 238 (291)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHH-TTCSCEEECGGGGGSSCH
T ss_pred HHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHH-hCCCEEEEchHHhCCCCH
Confidence 12578999999999999998 56999999999999996 599999999999985553
No 60
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.46 E-value=6.4e-13 Score=126.70 Aligned_cols=152 Identities=13% Similarity=0.115 Sum_probs=113.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEE-----E
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC-----K 231 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsV-----K 231 (436)
+.|+++.=+-++++++.+ .++.|+|+|- .|..++.+|+.+.++ +.+.+.+-+.+.+ +
T Consensus 73 ~ipvi~~Ggi~~~~~~~~---~~~~Gad~V~--------------lg~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~ 134 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEK---LRKLGYRRQI--------------VSSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVA 134 (241)
T ss_dssp GGGEEEESSCCSHHHHHH---HHHTTCCEEE--------------ECHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEEC
T ss_pred CCcEEEECCCCCHHHHHH---HHHCCCCEEE--------------ECchHhhChHHHHHH-HHcCCcEEEEEEecCCEEE
Confidence 456665433355655444 3446899883 356778889988888 7665332222333 3
Q ss_pred eccCCCh---hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc
Q 013813 232 IRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 308 (436)
Q Consensus 232 iRlg~~~---~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t 308 (436)
+ .||.. .+..++++.+++.|++.|.+|++++++... ..||+.++++++.+++|||++|||.+++|+.++++.+
T Consensus 135 ~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~---g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~ 210 (241)
T 1qo2_A 135 F-KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQ---EHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVH 210 (241)
T ss_dssp C-TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTC---CCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHH
T ss_pred E-CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCC---cCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcc
Confidence 3 24432 256788999999999999999998775432 3589999999999999999999999999999999876
Q ss_pred ----C-cceeeeehHHhhCCccchhhh
Q 013813 309 ----G-CEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 309 ----G-aDgVmIGRgal~nP~lf~~i~ 330 (436)
| ||||++|++++..+.-+.++.
T Consensus 211 ~~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 211 TETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp HHTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred cccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 9 999999999999988776554
No 61
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=9.8e-14 Score=137.63 Aligned_cols=144 Identities=20% Similarity=0.288 Sum_probs=105.0
Q ss_pred HHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCCh-------------
Q 013813 173 LNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL------------- 238 (436)
Q Consensus 173 ~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~------------- 238 (436)
.+.|+.++ .|+++|... ||.+...+...|+++|++|+.+.+|.+ ++++||+.|+|+|+..
T Consensus 27 ~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 34555554 489999433 388877777779999999999998865 5689999999998620
Q ss_pred ------------h----------------hHHHHHHHHHHcCccEEEecc--------------Cc------------cc
Q 013813 239 ------------Q----------------DTIKYAKMLEDAGCSLLAVHG--------------RT------------RD 264 (436)
Q Consensus 239 ------------~----------------d~~~~ak~le~aG~d~I~VHg--------------Rt------------~~ 264 (436)
. +..+.++++ +.|+++|.+|| |+ ..
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 0 234555556 78888888888 55 11
Q ss_pred ccCC--CCCccCH-------------------------------------HHHHHHHhhCCCcE--EEccCCCCHHHHHH
Q 013813 265 EKDG--KKFRADW-------------------------------------NAIKAVKNALRIPV--LANGNVRHMEDVQK 303 (436)
Q Consensus 265 ~~~~--~~g~ad~-------------------------------------~~i~~ik~~~~iPV--ianGGI~s~eda~~ 303 (436)
+.+. ....++| +.++++++..++|| |++|||.|++|+.+
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~ 259 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAAL 259 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHHHHH
Confidence 1100 0012445 88999999889999 69999999999999
Q ss_pred HHHhcCcceeeeehHHhhCCc
Q 013813 304 CLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 304 ~l~~tGaDgVmIGRgal~nP~ 324 (436)
+++. |||+|+||++++..+.
T Consensus 260 ~l~~-GaDgV~VGsaI~~a~d 279 (330)
T 2yzr_A 260 MMQL-GSDGVFVGSGIFKSEN 279 (330)
T ss_dssp HHHT-TCSCEEESHHHHTSSC
T ss_pred HHHc-CcCEEeeHHHHhcCCC
Confidence 9997 9999999999995443
No 62
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.42 E-value=4.7e-12 Score=119.86 Aligned_cols=189 Identities=20% Similarity=0.183 Sum_probs=130.9
Q ss_pred HHHHHHHhCCC-eEEeCcccchh-hccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCch
Q 013813 118 FRMLCRRYGAE-AAYTPMLHSRI-FTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQR 195 (436)
Q Consensus 118 fR~l~~~~Ga~-l~~Temisa~~-l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~ 195 (436)
+-..+.+.|++ +.+++|..... ...+.... ..+.. ..+.|+++.-+-.+++++.++ ++.|+|+|.||.
T Consensus 38 ~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i-~~i~~-~~~ipvi~~g~i~~~~~~~~~---~~~Gad~V~i~~----- 107 (253)
T 1h5y_A 38 MAVRYEEEGADEIAILDITAAPEGRATFIDSV-KRVAE-AVSIPVLVGGGVRSLEDATTL---FRAGADKVSVNT----- 107 (253)
T ss_dssp HHHHHHHTTCSCEEEEECCCCTTTHHHHHHHH-HHHHH-HCSSCEEEESSCCSHHHHHHH---HHHTCSEEEESH-----
T ss_pred HHHHHHHcCCCEEEEEeCCccccCCcccHHHH-HHHHH-hcCCCEEEECCCCCHHHHHHH---HHcCCCEEEECh-----
Confidence 33455667887 56666543210 00000111 11211 135788888777888765443 345899999982
Q ss_pred hhhcCcccccccCChHHHHHHHHHHhcc-c----Cc-----cEEEEeccCCC--hhhHHHHHHHHHHcCccEEEeccCcc
Q 013813 196 IARRGNYGAFLMDNLPLVKSLVEKLALN-L----NV-----PVSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTR 263 (436)
Q Consensus 196 ~~~~~~~Gs~Ll~~p~~v~eIv~av~~~-~----~i-----PVsVKiRlg~~--~~d~~~~ak~le~aG~d~I~VHgRt~ 263 (436)
.++.+|+.+.++++..... + +. ++.|++|.+.. ..+..++++.+.+.|++.|.+|+++.
T Consensus 108 ---------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~ 178 (253)
T 1h5y_A 108 ---------AAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDR 178 (253)
T ss_dssp ---------HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTT
T ss_pred ---------HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccC
Confidence 3456788888888775421 1 22 15788777542 23567889999999999999999887
Q ss_pred cccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhh
Q 013813 264 DEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 264 ~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
.+... ..+++.++++++.+++||+++|||.+.+++.++++ .|||+|++|++++.+++-+.++
T Consensus 179 ~g~~~---~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~-~Ga~~v~vgsal~~~~~~~~~~ 240 (253)
T 1h5y_A 179 DGTGL---GYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAA-AGADAVLAASLFHFRVLSIAQV 240 (253)
T ss_dssp TTTCS---CCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHH-TTCSEEEESHHHHTTSSCHHHH
T ss_pred CCCcC---cCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHH-cCCcHHHHHHHHHcCCCCHHHH
Confidence 54322 35899999999999999999999999999999997 5999999999999888665543
No 63
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.42 E-value=3.3e-12 Score=122.04 Aligned_cols=153 Identities=16% Similarity=0.204 Sum_probs=117.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhc-ccCccEE-----
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNVPVS----- 229 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~-~~~iPVs----- 229 (436)
.+.|+++.=+-++++++.++. +.|+|+|-| |..++.+|+.+.++.+.+.. .+-+.++
T Consensus 74 ~~iPvi~~Ggi~~~~~~~~~~---~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDARKLL---LSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWRG 136 (252)
T ss_dssp CCSCEEEESSCCSHHHHHHHH---HHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEECCcCCHHHHHHHH---HcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCC
Confidence 367888865556776655444 348898865 45667889999999888742 2222333
Q ss_pred ----EEeccCCCh---hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHH
Q 013813 230 ----CKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQ 302 (436)
Q Consensus 230 ----VKiRlg~~~---~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~ 302 (436)
|+++ +|.. .++.++++.+++.|++.|.+|++++++... ..+|+.++++++.+++||+++|||.+++|+.
T Consensus 137 g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~---g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~ 212 (252)
T 1ka9_F 137 DFPEVHVA-GGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKE---GYDLRLTRMVAEAVGVPVIASGGAGRMEHFL 212 (252)
T ss_dssp TEEEEEET-TTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCS---CCCHHHHHHHHHHCSSCEEEESCCCSHHHHH
T ss_pred CCEEEEEC-CCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcC---CCCHHHHHHHHHHcCCCEEEeCCCCCHHHHH
Confidence 3432 3432 356788999999999999999887765432 3589999999999999999999999999999
Q ss_pred HHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 303 KCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 303 ~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++ +|||+|++|++++.+|+.+.++.
T Consensus 213 ~~~~-~Gadgv~vgsal~~~~~~~~~~~ 239 (252)
T 1ka9_F 213 EAFQ-AGAEAALAASVFHFGEIPIPKLK 239 (252)
T ss_dssp HHHH-TTCSEEEESHHHHTTSSCHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHcCCCCHHHHH
Confidence 9986 69999999999999999888665
No 64
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.42 E-value=2.5e-12 Score=124.71 Aligned_cols=191 Identities=13% Similarity=0.183 Sum_probs=129.6
Q ss_pred cEEEccCCCCCcHHHHHHH---HHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCC-----HHH---H
Q 013813 104 KLIVAPMVDNSELPFRMLC---RRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCAND-----PEI---L 172 (436)
Q Consensus 104 ~i~lAPM~gvtd~~fR~l~---~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d-----~e~---~ 172 (436)
++.++||.+..+.. .+| .++|++.+.+.. .+..... ..+ ..+.|+++|+.+.. +.. .
T Consensus 35 ~~~l~p~~~~~~~~--~~~~~~~~~g~~~i~~~~----~~~~~~~---~~~---~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 35 GVSNGPIKGLIDIR--KTVNDVAEGGANAVLLHK----GIVRHGH---RGY---GKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp HHHHCSCTTSSSHH--HHHHHHHHHTCSEEEECH----HHHHSCC---CSS---SCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred ccccCCCcchhhHH--HHHHHHHhcCCCEEEeCH----HHHHHHH---Hhh---cCCCCEEEEEcCCCcCCCCcccchHH
Confidence 45579999999874 444 577998877643 1111100 001 23578999998765 211 3
Q ss_pred HHHHHHHcCCCcEE--EEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec-------cCCChhhHHH
Q 013813 173 LNAARRVEPYCDYV--DINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR-------VFPNLQDTIK 243 (436)
Q Consensus 173 ~~AA~~v~~g~D~I--dLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR-------lg~~~~d~~~ 243 (436)
.++.+.++.|+|.| .+|.||+.. ..+ .+.+.++++.++ ..++|+.+.+- .+.+..+..+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~--------~~~---~~~~~~v~~~~~-~~g~~viv~~~~~G~~l~~~~~~~~~~~ 170 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDED--------WEA---YRDLGMIAETCE-YWGMPLIAMMYPRGKHIQNERDPELVAH 170 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTH--------HHH---HHHHHHHHHHHH-HHTCCEEEEEEECSTTCSCTTCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCH--------HHH---HHHHHHHHHHHH-HcCCCEEEEeCCCCcccCCCCCHhHHHH
Confidence 33344567899999 888887631 111 134555555554 34889888751 1234445556
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCC--HHHHHHHHH---hcCcceeeeehH
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRH--MEDVQKCLE---ETGCEGVLSAES 318 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s--~eda~~~l~---~tGaDgVmIGRg 318 (436)
.++.+++.|+|+|.++. +.+|+.++++++.+++||++.|||.+ .+|+.+++. ..|++||++||+
T Consensus 171 ~a~~a~~~Gad~i~~~~-----------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 171 AARLGAELGADIVKTSY-----------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp HHHHHHHTTCSEEEECC-----------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred HHHHHHHcCCCEEEECC-----------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 66889999999998872 25789999999999999999999995 888555442 359999999999
Q ss_pred HhhCCccchhh
Q 013813 319 LLENPALFAGF 329 (436)
Q Consensus 319 al~nP~lf~~i 329 (436)
++.+|+.+..+
T Consensus 240 i~~~~~~~~~~ 250 (273)
T 2qjg_A 240 IFQHDDVVGIT 250 (273)
T ss_dssp HHTSSSHHHHH
T ss_pred hhCCCCHHHHH
Confidence 99999876543
No 65
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.40 E-value=6.1e-12 Score=121.25 Aligned_cols=187 Identities=14% Similarity=0.125 Sum_probs=116.2
Q ss_pred HHHHHhCCCe-EEeCcccchhhc-cChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhh
Q 013813 120 MLCRRYGAEA-AYTPMLHSRIFT-ESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIA 197 (436)
Q Consensus 120 ~l~~~~Ga~l-~~Temisa~~l~-~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~ 197 (436)
..+.+.|++. .+|++..+.... .+...... +.. ..+.|+++.-+-++++++.++. +.|+|+|-|.
T Consensus 37 ~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~-i~~-~~~iPvi~~ggi~~~~~i~~~~---~~Gad~v~lg-------- 103 (266)
T 2w6r_A 37 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF-VRP-LTTLPIIASGGAGKMEHFLEAF---LAGADKALAA-------- 103 (266)
T ss_dssp HHHHHHTCSEEEEEETTTSSCSSCCCHHHHHH-HGG-GCCSCEEEESCCCSTHHHHHHH---HHTCSEEECC--------
T ss_pred HHHHHCCCCEEEEEecCcccCCCcccHHHHHH-HHH-hcCCCEEEECCCCCHHHHHHHH---HcCCcHhhhh--------
Confidence 3445678875 556543221111 11111111 221 2367888865557777766554 3588887654
Q ss_pred hcCccccccc-C--ChHHHHHHHHHHh---cc--cCccE-------EEEeccCCCh---hhHHHHHHHHHHcCccEEEec
Q 013813 198 RRGNYGAFLM-D--NLPLVKSLVEKLA---LN--LNVPV-------SCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVH 259 (436)
Q Consensus 198 ~~~~~Gs~Ll-~--~p~~v~eIv~av~---~~--~~iPV-------sVKiRlg~~~---~d~~~~ak~le~aG~d~I~VH 259 (436)
+.++ . +++.+.++++... +. +++++ .|+++ +|.. .+..++++.+++.|++.|.+|
T Consensus 104 ------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t 176 (266)
T 2w6r_A 104 ------SVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLT 176 (266)
T ss_dssp ------CCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEE
T ss_pred ------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEE
Confidence 4445 3 7888888877654 12 22332 34443 3421 256788899999999999999
Q ss_pred cCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 260 GRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 260 gRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++++... ..+|+.++++++.+++||+++|||.+++|+.++++ +|||+|++|++++.+|+.+.++.
T Consensus 177 ~~~~~g~~~---g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~-~Gadgv~vgsal~~~~~~~~~~~ 243 (266)
T 2w6r_A 177 SIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDMRELK 243 (266)
T ss_dssp ETTTTTTCS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHH-HTCSEEEESTTTC----------
T ss_pred eecCCCCcC---CCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHH-cCCHHHHccHHHHcCCCCHHHHH
Confidence 888765432 35899999999999999999999999999999997 59999999999999999988765
No 66
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.39 E-value=3.4e-12 Score=129.58 Aligned_cols=192 Identities=19% Similarity=0.136 Sum_probs=124.5
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCC-CeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEec-CCCHHHHHHHHHHH
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGA-EAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFC-ANDPEILLNAARRV 179 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga-~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~-g~d~e~~~~AA~~v 179 (436)
+.||+.|||.++|+..+...+.+.|. +++...| +...+ ...++......++.+.+. |.+++....+..++
T Consensus 46 ~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~-s~e~~-------~~~i~~vk~~~~l~vga~vg~~~~~~~~~~~li 117 (366)
T 4fo4_A 46 NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNM-SIEQQ-------AAQVHQVKISGGLRVGAAVGAAPGNEERVKALV 117 (366)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSS-CHHHH-------HHHHHHHHTTTSCCCEEECCSCTTCHHHHHHHH
T ss_pred CCCEEeCCCCCCChHHHHHHHHHcCCceEeecCC-CHHHH-------HHHHHHHHhcCceeEEEEeccChhHHHHHHHHH
Confidence 56899999999999988766566654 3332211 11111 111111111133444443 33333344444567
Q ss_pred cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEe
Q 013813 180 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV 258 (436)
Q Consensus 180 ~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V 258 (436)
+.|+|.|.||..- | +++.+.+.++++++.. ++||.++.= .+.+.++.+.++|+|+|.+
T Consensus 118 eaGvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v------~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 118 EAGVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGGNV------ATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HTTCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHHHHHHHHHTCSEEEE
T ss_pred hCCCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEeeee------CCHHHHHHHHHcCCCEEEE
Confidence 7899999998420 1 3466777888888876 788887521 1234577888999999999
Q ss_pred c------cCcccccCCCCCccCHHHHHHHHh---hCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 259 H------GRTRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 259 H------gRt~~~~~~~~g~ad~~~i~~ik~---~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
. ..++.. ...+.+.+..+.++++ .+++|||+.|||.+..|+.+++.. |||+||+|+.++..++-
T Consensus 177 G~gpGs~~~tr~~--~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~-GAd~V~vGs~f~~t~Es 249 (366)
T 4fo4_A 177 GIGPGSICTTRIV--TGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-GASCVMVGSMFAGTEEA 249 (366)
T ss_dssp CSSCSTTBCHHHH--HCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTTS
T ss_pred ecCCCCCCCcccc--cCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc-CCCEEEEChHhhcCCCC
Confidence 2 111110 0122456777777765 468999999999999999999997 99999999999887764
No 67
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.39 E-value=5.9e-12 Score=120.38 Aligned_cols=153 Identities=17% Similarity=0.185 Sum_probs=117.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhc-ccCccEE-----
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL-NLNVPVS----- 229 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~-~~~iPVs----- 229 (436)
.+.|+++--+-++++++.++ ++.|+|+|-+ |..++.+|+.+.++++.+.. .+.+.+.
T Consensus 73 ~~ipvi~~ggI~~~~~~~~~---~~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~ 135 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETASEL---ILRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 135 (253)
T ss_dssp CCSCEEEESSCCSHHHHHHH---HHTTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEeCCCCCHHHHHHH---HHcCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccC
Confidence 46788887777787764444 4568998855 45667789999999888743 2223333
Q ss_pred ----EEeccCCCh---hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHH
Q 013813 230 ----CKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQ 302 (436)
Q Consensus 230 ----VKiRlg~~~---~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~ 302 (436)
|+++ +|.. .+..++++.+++.|++.|.+|++++++... ..+|+.++++++.+++||+++|||.+++|+.
T Consensus 136 g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~---g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~ 211 (253)
T 1thf_D 136 GEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFL 211 (253)
T ss_dssp TEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHH
T ss_pred CcEEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCC---CCCHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 3442 3321 256788999999999999999888765332 3589999999999999999999999999999
Q ss_pred HHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 303 KCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 303 ~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++ +|||+|++|++++.+|+.+.++.
T Consensus 212 ~~~~-~Gadgv~vGsal~~~~~~~~~~~ 238 (253)
T 1thf_D 212 EAFL-AGADAALAASVFHFREIDVRELK 238 (253)
T ss_dssp HHHH-TTCSEEEESHHHHTTCSCHHHHH
T ss_pred HHHH-cCChHHHHHHHHHcCCCCHHHHH
Confidence 9996 69999999999999998776554
No 68
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.34 E-value=8.9e-12 Score=127.79 Aligned_cols=128 Identities=21% Similarity=0.204 Sum_probs=95.1
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
.+..+++.|+|.|.|+.+ .| +++.+.++++++++..++||.++.- .+.+.|+.+.++|+
T Consensus 148 ~~~~lveaGvdvIvldta----------~G-----~~~~~~e~I~~ik~~~~i~Vi~g~V------~t~e~A~~a~~aGA 206 (400)
T 3ffs_A 148 RAKLLVEAGVDVIVLDSA----------HG-----HSLNIIRTLKEIKSKMNIDVIVGNV------VTEEATKELIENGA 206 (400)
T ss_dssp HHHHHHHHTCSEEEECCS----------CC-----SBHHHHHHHHHHHTTCCCEEEEEEE------CSHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEeCC----------CC-----CcccHHHHHHHHHhcCCCeEEEeec------CCHHHHHHHHHcCC
Confidence 333456779999988743 11 3566788889998888999998621 22456788999999
Q ss_pred cEEEecc------CcccccCCCCCccCHHHHHHHHhh---CCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 254 SLLAVHG------RTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 254 d~I~VHg------Rt~~~~~~~~g~ad~~~i~~ik~~---~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
|+|.+.. .++.. ...+.+++..+.++++. +++|||+.|||.+.+|+.+++.. |||+||+|+.++..++
T Consensus 207 D~I~vG~g~Gs~~~tr~~--~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal-GAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 207 DGIKVGIGPGSICTTRIV--AGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV-GASSVMIGSILAGTEE 283 (400)
T ss_dssp SEEEECC---------CC--SCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT-TCSEEEECGGGTTBTT
T ss_pred CEEEEeCCCCcCcccccc--cccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc-CCCEEEEChHHhcCCC
Confidence 9999931 11111 11234578888888764 58999999999999999999986 9999999999998776
Q ss_pred c
Q 013813 325 L 325 (436)
Q Consensus 325 l 325 (436)
-
T Consensus 284 s 284 (400)
T 3ffs_A 284 S 284 (400)
T ss_dssp S
T ss_pred C
Confidence 3
No 69
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.29 E-value=1.7e-11 Score=129.54 Aligned_cols=141 Identities=17% Similarity=0.149 Sum_probs=106.8
Q ss_pred CCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHH
Q 013813 166 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 166 g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+++....+..+++.|+|.|+||.+|. +++...++++++++.+ ++||.+|- . .+.+.
T Consensus 251 G~~~~~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~-----v-~t~~~ 309 (514)
T 1jcn_A 251 GTREDDKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGN-----V-VTAAQ 309 (514)
T ss_dssp CSSTTHHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEE-----E-CSHHH
T ss_pred cCchhhHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEecc-----c-chHHH
Confidence 4455556666667788999999998762 2366778999999888 89999871 1 22456
Q ss_pred HHHHHHcCccEEEec---cCccccc----CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 245 AKMLEDAGCSLLAVH---GRTRDEK----DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 245 ak~le~aG~d~I~VH---gRt~~~~----~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
|+.+.++|+|+|.|. |.+.... .+.+....+..+.++++.+++|||++|||.++.|+.+++.. |||+||+||
T Consensus 310 a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~-GAd~V~iG~ 388 (514)
T 1jcn_A 310 AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALAL-GASTVMMGS 388 (514)
T ss_dssp HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEEST
T ss_pred HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHc-CCCeeeECH
Confidence 889999999999882 2111111 01111345788888998889999999999999999999996 999999999
Q ss_pred HHhhCCccchh
Q 013813 318 SLLENPALFAG 328 (436)
Q Consensus 318 gal~nP~lf~~ 328 (436)
+++.+|+....
T Consensus 389 ~~l~~~e~~~~ 399 (514)
T 1jcn_A 389 LLAATTEAPGE 399 (514)
T ss_dssp TTTTSTTSSCC
T ss_pred HHHcCCcCCcc
Confidence 99999986543
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.25 E-value=9.2e-11 Score=118.51 Aligned_cols=192 Identities=13% Similarity=0.102 Sum_probs=125.1
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCC-CCEEEEecCCCHHHHHHHHHHHc
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKED-RPLFVQFCANDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e-~plivQL~g~d~e~~~~AA~~v~ 180 (436)
+.||++|||.++++..+-..+.+.|.-.+.+--.+...... .++..+.. .++.+.+ |..++++.++..+++
T Consensus 57 ~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~s~e~~~~-------~i~~~p~~l~~v~~~~-g~~~~~~~~~~~l~~ 128 (351)
T 2c6q_A 57 GVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQE-------FAGQNPDCLEHLAASS-GTGSSDFEQLEQILE 128 (351)
T ss_dssp ECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTCCHHHHHH-------HHHHCGGGCTTEEEEE-CSSHHHHHHHHHHHH
T ss_pred cCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCCCHHHHHH-------HHhhCchhhheeEeec-CCChHHHHHHHHHHh
Confidence 56999999999999988777777774222221111111100 01100000 2466666 556677777666666
Q ss_pred C--CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEE
Q 013813 181 P--YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLA 257 (436)
Q Consensus 181 ~--g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~ 257 (436)
. |+|.|.+++. .| ++..+.+.++++++.. ++||.+|.= .+ .+.|+.+.++|+|+|.
T Consensus 129 ~~~g~~~i~i~~~----------~g-----~~~~~~~~i~~lr~~~~~~~vi~g~v--~t----~e~A~~a~~aGaD~I~ 187 (351)
T 2c6q_A 129 AIPQVKYICLDVA----------NG-----YSEHFVEFVKDVRKRFPQHTIMAGNV--VT----GEMVEELILSGADIIK 187 (351)
T ss_dssp HCTTCCEEEEECS----------CT-----TBHHHHHHHHHHHHHCTTSEEEEEEE--CS----HHHHHHHHHTTCSEEE
T ss_pred ccCCCCEEEEEec----------CC-----CcHHHHHHHHHHHHhcCCCeEEEEeC--CC----HHHHHHHHHhCCCEEE
Confidence 5 8999888742 12 3456778899999888 899998831 22 3457888999999998
Q ss_pred ecc--Cccc---ccCCCCCccCHHHHHHHH---hhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 258 VHG--RTRD---EKDGKKFRADWNAIKAVK---NALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 258 VHg--Rt~~---~~~~~~g~ad~~~i~~ik---~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
|.. .... +..+ .+.+....+.++. +..++|||+.|||.+..|+.++|.. |||+|++||.++..++
T Consensus 188 v~~g~G~~~~~r~~~g-~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal-GA~~V~vG~~fl~~~E 260 (351)
T 2c6q_A 188 VGIGPGSVCTTRKKTG-VGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA-GADFVMLGGMLAGHSE 260 (351)
T ss_dssp ECSSCSTTBCHHHHHC-BCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTBTT
T ss_pred ECCCCCcCcCccccCC-CCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc-CCCceeccHHHhcCcc
Confidence 732 1100 0011 1123344455544 3458999999999999999999997 9999999999987544
No 71
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.24 E-value=1.6e-10 Score=117.70 Aligned_cols=147 Identities=12% Similarity=0.082 Sum_probs=125.6
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
.|+...+.+.++++++++|+. ++.||+.|+|++|| +++...+++++|++.+ ++++.++.+.+
T Consensus 137 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 137 VGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 344455667899999988865 56799999999885 5788889999999998 58899998889
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.++++++++.+++.|+++|. ++ . .+.||+..+++++.+++||++++.+.++++++++++...||.|++
T Consensus 201 ~~~~~a~~~~~~l~~~~i~~iE------qP---~-~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 201 WSVHDAINMCRKLEKYDIEFIE------QP---T-VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEE------CC---S-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEe------CC---C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 9999999999999999999884 11 1 246899999999999999999999999999999999988999999
Q ss_pred ehHHhhCCccchhhh
Q 013813 316 AESLLENPALFAGFR 330 (436)
Q Consensus 316 GRgal~nP~lf~~i~ 330 (436)
..+.++.++-+.++.
T Consensus 271 k~~~~GGit~~~~i~ 285 (384)
T 2pgw_A 271 GPREIGGIQPMMKAA 285 (384)
T ss_dssp CHHHHTSHHHHHHHH
T ss_pred cchhhCCHHHHHHHH
Confidence 999998888666543
No 72
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.23 E-value=6.6e-11 Score=111.07 Aligned_cols=158 Identities=18% Similarity=0.198 Sum_probs=106.7
Q ss_pred EEEEecCC----CHHHHHHHHHHHc-CCCcEEEEe-----------cCCCchh-hhcC--c-----------------cc
Q 013813 160 LFVQFCAN----DPEILLNAARRVE-PYCDYVDIN-----------LGCPQRI-ARRG--N-----------------YG 203 (436)
Q Consensus 160 livQL~g~----d~e~~~~AA~~v~-~g~D~IdLN-----------~GCP~~~-~~~~--~-----------------~G 203 (436)
+.+|+.++ +++...+.|+.++ .|+++|.++ .++|.-. .+++ + .|
T Consensus 9 ~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G 88 (223)
T 1y0e_A 9 VSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ 88 (223)
T ss_dssp EECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT
T ss_pred EEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC
Confidence 56788888 7777888777664 488888886 4577621 1111 0 12
Q ss_pred cc-------ccCCh-HHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--ccCcccccCCCCCc
Q 013813 204 AF-------LMDNL-PLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFR 272 (436)
Q Consensus 204 s~-------Ll~~p-~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V--HgRt~~~~~~~~g~ 272 (436)
+. ...+| +.+.++++.+++.+ +.++.+.+. +. +.++.+++.|+|+|.+ ++.+..........
T Consensus 89 ad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t~----~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~ 161 (223)
T 1y0e_A 89 CEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA---TV----EEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ 161 (223)
T ss_dssp CSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---SH----HHHHHHHHTTCSEEECTTTTSSTTSTTCCTTH
T ss_pred CCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC---CH----HHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCc
Confidence 21 11133 34567777777655 667766542 22 2355688999999976 34443222111124
Q ss_pred cCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 273 ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 273 ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
.+|+.++++++.+++||+++|||.+.+++.++++. |||+|++|++++. |+..
T Consensus 162 ~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~-Gad~v~vG~al~~-p~~~ 213 (223)
T 1y0e_A 162 NDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDL-GVHCSVVGGAITR-PKEI 213 (223)
T ss_dssp HHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHC-HHHH
T ss_pred ccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHc-CCCEEEEChHHcC-cHHH
Confidence 57889999999999999999999999999999986 9999999999765 6644
No 73
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.22 E-value=3.6e-11 Score=126.72 Aligned_cols=141 Identities=19% Similarity=0.140 Sum_probs=105.8
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCCh
Q 013813 160 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNL 238 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~ 238 (436)
++..-.|..++.+..+..+++.|+|.|+||..||. .+.+.++++++++.. ++||.++--
T Consensus 221 ~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~i~~ir~~~p~~~Vi~g~v----- 280 (496)
T 4fxs_A 221 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH---------------SEGVLQRIRETRAAYPHLEIIGGNV----- 280 (496)
T ss_dssp CCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTCCEEEEEE-----
T ss_pred eeeeeeccccchHHHHHHHHhccCceEEecccccc---------------chHHHHHHHHHHHHCCCceEEEccc-----
Confidence 33334555666677777778889999999998863 356778889998887 789988621
Q ss_pred hhHHHHHHHHHHcCccEEEec------cCcccccCCCCCccCHHHHHHHHhh---CCCcEEEccCCCCHHHHHHHHHhcC
Q 013813 239 QDTIKYAKMLEDAGCSLLAVH------GRTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETG 309 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VH------gRt~~~~~~~~g~ad~~~i~~ik~~---~~iPVianGGI~s~eda~~~l~~tG 309 (436)
.+.+.++.+.++|+|+|.|. ..++... +.+.+++..+.++++. .++|||++|||.+++|+.+++.. |
T Consensus 281 -~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~--g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-G 356 (496)
T 4fxs_A 281 -ATAEGARALIEAGVSAVKVGIGPGSICTTRIVT--GVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA-G 356 (496)
T ss_dssp -CSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHH--CCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-T
T ss_pred -CcHHHHHHHHHhCCCEEEECCCCCcCccccccc--CCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHc-C
Confidence 12355788899999999983 2222111 2235678888888774 47999999999999999999987 9
Q ss_pred cceeeeehHHhhCCc
Q 013813 310 CEGVLSAESLLENPA 324 (436)
Q Consensus 310 aDgVmIGRgal~nP~ 324 (436)
||+||+|+.++.-..
T Consensus 357 Ad~V~iGs~f~~t~E 371 (496)
T 4fxs_A 357 ASCVMVGSMFAGTEE 371 (496)
T ss_dssp CSEEEESTTTTTBTT
T ss_pred CCeEEecHHHhcCCC
Confidence 999999999877554
No 74
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.21 E-value=3.7e-11 Score=114.97 Aligned_cols=100 Identities=18% Similarity=0.218 Sum_probs=85.7
Q ss_pred EEEEeccCCC--hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 228 VSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 228 VsVKiRlg~~--~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
+.||+|.+.. ..+..++++.++++|++.|+++..+...... ..+++.++++++.+++||+++|||.+++++++++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~---~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l 98 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF 98 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTCSS---CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccCCC---cccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH
Confidence 5788886553 2378899999999999999999887653221 4689999999999999999999999999999999
Q ss_pred HhcCcceeeeehHHhhCCccchhhhh
Q 013813 306 EETGCEGVLSAESLLENPALFAGFRT 331 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~lf~~i~~ 331 (436)
+. |||+|++||+++.||+++.++..
T Consensus 99 ~~-Gad~V~ig~~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 99 LR-GADKVSINTAAVENPSLITQIAQ 123 (247)
T ss_dssp HT-TCSEECCSHHHHHCTHHHHHHHH
T ss_pred Hc-CCCeeehhhHHhhChHHHHHHHH
Confidence 85 89999999999999999887764
No 75
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.19 E-value=7.2e-11 Score=124.23 Aligned_cols=136 Identities=22% Similarity=0.184 Sum_probs=104.3
Q ss_pred cCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHH
Q 013813 165 CANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 165 ~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~ 243 (436)
.|...+.+..+..+++.|+|.|.||..|+. ...+.++++++++.. ++||.++-- .+.+
T Consensus 224 vG~~~~~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v------~t~e 282 (490)
T 4avf_A 224 VGTGADTGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNI------ATAE 282 (490)
T ss_dssp ECSSTTHHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEE------CSHH
T ss_pred eccccchHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeee------CcHH
Confidence 355566677777788889999999988763 456778889998887 789988621 1234
Q ss_pred HHHHHHHcCccEEEec------cCcccccCCCCCccCHHHHHHHHhhC---CCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVH------GRTRDEKDGKKFRADWNAIKAVKNAL---RIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VH------gRt~~~~~~~~g~ad~~~i~~ik~~~---~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
.++.+.++|+|+|.|- ..++.. .+.+.+++..+.++++.+ ++|||+.|||.+.+|+.+++.. |||+||
T Consensus 283 ~a~~l~~aGaD~I~vg~g~Gs~~~t~~~--~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~-GAd~V~ 359 (490)
T 4avf_A 283 AAKALAEAGADAVKVGIGPGSICTTRIV--AGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVA-GAYCVM 359 (490)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHH--TCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHH-TCSEEE
T ss_pred HHHHHHHcCCCEEEECCCCCcCCCcccc--CCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHc-CCCeee
Confidence 5788999999999982 111111 122356788888888754 7999999999999999999987 999999
Q ss_pred eehHHhhCCc
Q 013813 315 SAESLLENPA 324 (436)
Q Consensus 315 IGRgal~nP~ 324 (436)
+|++++....
T Consensus 360 vGs~~~~~~E 369 (490)
T 4avf_A 360 MGSMFAGTEE 369 (490)
T ss_dssp ECTTTTTBTT
T ss_pred ecHHHhcCCC
Confidence 9999987654
No 76
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.16 E-value=1.5e-10 Score=110.30 Aligned_cols=126 Identities=13% Similarity=0.170 Sum_probs=96.9
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
++...++.|+|.|-|+..+ ..+|+.+.++++.+++. ++++.+.+. +.+.++.++++|+
T Consensus 93 ~i~~~~~aGad~I~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Ga 150 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASF--------------RSRPVDIDSLLTRIRLH-GLLAMADCS-------TVNEGISCHQKGI 150 (229)
T ss_dssp HHHHHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECS-------SHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECccc--------------cCChHHHHHHHHHHHHC-CCEEEEecC-------CHHHHHHHHhCCC
Confidence 4444567799999888532 23566788888888764 788888743 2455778899999
Q ss_pred cEEE--eccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 254 SLLA--VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 254 d~I~--VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
|+|. ++|.|.... ....+|+.++++++. ++|||++|||.|++|+.++++. |||+|++|++++ +|+.+.
T Consensus 151 d~Ig~~~~g~t~~~~---~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGsai~-~p~~~~ 220 (229)
T 3q58_A 151 EFIGTTLSGYTGPIT---PVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEH-GAWAVTVGSAIT-RIEHIC 220 (229)
T ss_dssp SEEECTTTTSSSSCC---CSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHT-TCSEEEECHHHH-CHHHHH
T ss_pred CEEEecCccCCCCCc---CCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHc-CCCEEEEchHhc-ChHHHH
Confidence 9995 466665432 235789999999988 9999999999999999999986 999999996665 676554
No 77
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.14 E-value=2.2e-10 Score=109.39 Aligned_cols=125 Identities=11% Similarity=0.158 Sum_probs=96.0
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
++...++.|+|.|-|+..+ ..+|+.+.++++.+++. ++++.+.+. +.+.++.++++|+
T Consensus 93 ~i~~~~~~Gad~V~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Ga 150 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTA--------------RQRPVAVEALLARIHHH-HLLTMADCS-------SVDDGLACQRLGA 150 (232)
T ss_dssp HHHHHHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECC-------SHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECccc--------------cCCHHHHHHHHHHHHHC-CCEEEEeCC-------CHHHHHHHHhCCC
Confidence 4444567799999888532 23567788888888754 788888743 2455778899999
Q ss_pred cEEE--eccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 254 SLLA--VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 254 d~I~--VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
|+|. ++|++...+ ....+|+.++++++. ++|||++|||.|++|+.++++. |||+|++|++++ +|+..
T Consensus 151 d~Ig~~~~g~t~~~~---~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~-GadgV~VGsal~-~p~~~ 219 (232)
T 3igs_A 151 DIIGTTMSGYTTPDT---PEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRY-GAWAVTVGSAIT-RLEHI 219 (232)
T ss_dssp SEEECTTTTSSSSSC---CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHH-CHHHH
T ss_pred CEEEEcCccCCCCCC---CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHc-CCCEEEEehHhc-CHHHH
Confidence 9995 466665432 235789999999988 9999999999999999999986 999999997766 56544
No 78
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.13 E-value=4.3e-10 Score=111.18 Aligned_cols=154 Identities=20% Similarity=0.236 Sum_probs=96.8
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCC
Q 013813 158 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPN 237 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~ 237 (436)
.+++++. ++.++++++ .+.|+|+|.+. ||.+...+...|+.++++++.+.+|. +.+++||.+|+|.+..
T Consensus 22 ~g~i~~~---~~~~~a~~~--~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I~----~~~~iPv~~k~r~g~~ 90 (305)
T 2nv1_A 22 GGVIMDV---INAEQAKIA--EEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEVM----NAVSIPVMAKARIGHI 90 (305)
T ss_dssp TCEEEEE---SSHHHHHHH--HHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHHH----HHCSSCEEEEECTTCH
T ss_pred CCeeecC---CHHHHHHHH--HHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHHH----HhCCCCEEecccccch
Confidence 4566643 555444333 35689999544 35544444455777888888777764 4468999999998530
Q ss_pred h-----------------------------------------hhHHHHHHHHHHcCccEEEecc--------------Cc
Q 013813 238 L-----------------------------------------QDTIKYAKMLEDAGCSLLAVHG--------------RT 262 (436)
Q Consensus 238 ~-----------------------------------------~d~~~~ak~le~aG~d~I~VHg--------------Rt 262 (436)
. .+..+..+ ..+.|+|+|.++| |+
T Consensus 91 ~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~-a~~~Gad~V~~~G~~g~g~~~~~~~h~rt 169 (305)
T 2nv1_A 91 VEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATR-RIAEGASMLRTKGEPGTGNIVEAVRHMRK 169 (305)
T ss_dssp HHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHH-HHHTTCSEEEECCCTTSCCTHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHH-HHHCCCCEEEeccccCccchHHHHhhhhh
Confidence 0 00112222 2355666666643 11
Q ss_pred ------------ccccCC--CCCccCHHHHHHHHhhCCCcEE--EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 263 ------------RDEKDG--KKFRADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 263 ------------~~~~~~--~~g~ad~~~i~~ik~~~~iPVi--anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
..+.+. ...+.++++++++++.+++||+ ++|||.|++|+.++++. |||+|++||+++..+.
T Consensus 170 ~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~-GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 170 VNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQL-GADGVFVGSGIFKSDN 246 (305)
T ss_dssp HHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHT-TCSCEEECGGGGGSSC
T ss_pred hhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHc-CCCEEEEcHHHHcCCC
Confidence 000000 0024678999999998899999 99999999999999984 9999999999997544
No 79
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.12 E-value=2.2e-10 Score=108.43 Aligned_cols=101 Identities=20% Similarity=0.309 Sum_probs=78.4
Q ss_pred HHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEE--EeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 212 LVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLL--AVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 212 ~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I--~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
.+.++++.+++.. +.++.+.++. . +-++.+.++|+|+| ++++.+... ... ...+++.++++++. ++|
T Consensus 119 ~~~~~i~~i~~~~~~~~v~~~~~t---~----~ea~~a~~~Gad~i~~~v~g~~~~~-~~~-~~~~~~~i~~~~~~-~ip 188 (234)
T 1yxy_A 119 DIASFIRQVKEKYPNQLLMADIST---F----DEGLVAHQAGIDFVGTTLSGYTPYS-RQE-AGPDVALIEALCKA-GIA 188 (234)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECSS---H----HHHHHHHHTTCSEEECTTTTSSTTS-CCS-SSCCHHHHHHHHHT-TCC
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCC---H----HHHHHHHHcCCCEEeeeccccCCCC-cCC-CCCCHHHHHHHHhC-CCC
Confidence 4567777777665 6777776432 2 22677889999999 788875432 111 24689999999988 999
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
|++.|||+|.+++.++++. |||+|++|++++. |+
T Consensus 189 via~GGI~s~~~~~~~~~~-Gad~v~vGsal~~-p~ 222 (234)
T 1yxy_A 189 VIAEGKIHSPEEAKKINDL-GVAGIVVGGAITR-PK 222 (234)
T ss_dssp EEEESCCCSHHHHHHHHTT-CCSEEEECHHHHC-HH
T ss_pred EEEECCCCCHHHHHHHHHC-CCCEEEEchHHhC-hH
Confidence 9999999999999999985 9999999999887 53
No 80
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.07 E-value=1.2e-09 Score=110.01 Aligned_cols=143 Identities=15% Similarity=0.216 Sum_probs=117.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 157 DRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
..|+...+...++++++++|+. ++.||+.|+|++||+ +++...++++++++.+ ++++.++.+
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3455555433688999988864 567999999999872 4677888999999887 689999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.++++++++.+++.|+++|- +.. .+.||+..+++++.+++||++++.+.+.++++++++...||.|
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE-------~P~---~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v 267 (359)
T 1mdl_A 198 QSLDVPAAIKRSQALQQEGVTWIE-------EPT---LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLA 267 (359)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSCEE-------CCS---CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEE-------CCC---ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999999872 211 1468999999999999999999999999999999999889999
Q ss_pred eeehHHhhCCc
Q 013813 314 LSAESLLENPA 324 (436)
Q Consensus 314 mIGRgal~nP~ 324 (436)
++..+.++..+
T Consensus 268 ~ik~~~~GGi~ 278 (359)
T 1mdl_A 268 MPDAMKIGGVT 278 (359)
T ss_dssp CCBTTTTTHHH
T ss_pred eecchhhCCHH
Confidence 98755444433
No 81
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.03 E-value=2e-09 Score=108.99 Aligned_cols=135 Identities=14% Similarity=0.113 Sum_probs=114.2
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
++++++++|+. ++.||+.|.|++||+ +++...++++++++.+ ++++.++.+.+++.++++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~ 210 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRA 210 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 89999888864 567999999999984 4677788999999887 68999999999999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++.+++.|+++|- +.. .+.||+..+++++.+++||++++.+.+.++++++++...||.|++..+.++.++
T Consensus 211 ~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 280 (371)
T 2ovl_A 211 ARALAPFDLHWIE-------EPT---IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYT 280 (371)
T ss_dssp HHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHH
T ss_pred HHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHH
Confidence 9999999999873 211 146899999999999999999999999999999999988999999866665554
Q ss_pred cch
Q 013813 325 LFA 327 (436)
Q Consensus 325 lf~ 327 (436)
-+.
T Consensus 281 ~~~ 283 (371)
T 2ovl_A 281 TFR 283 (371)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 82
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.02 E-value=2.4e-09 Score=108.72 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=116.7
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+...+...++++++++|+. ++.||+.|+|++|+ +++...+++++|++.+ ++++.++.+.
T Consensus 135 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 344444544689999988865 56799999999886 4688889999999988 5899999999
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++++++.+++.|+ +|. + .. + ||+..+++++.+++||++++.+.+.++++++++...||.|+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-------~--P~--~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ 265 (379)
T 2rdx_A 199 GWRVDNAIRLARATRDLDY-ILE-------Q--PC--R-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICC 265 (379)
T ss_dssp CSCHHHHHHHHHHTTTSCC-EEE-------C--CS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhCCe-EEe-------C--Cc--C-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 9999999999999999999 762 2 22 3 89999999999999999999999999999999998899999
Q ss_pred eehHHhhCCccc
Q 013813 315 SAESLLENPALF 326 (436)
Q Consensus 315 IGRgal~nP~lf 326 (436)
+-.+.++..+-+
T Consensus 266 ik~~~~GGit~~ 277 (379)
T 2rdx_A 266 LKISNLGGLSKA 277 (379)
T ss_dssp EETTTTTSHHHH
T ss_pred EeccccCCHHHH
Confidence 986665555433
No 83
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.99 E-value=3.6e-09 Score=107.80 Aligned_cols=143 Identities=9% Similarity=0.044 Sum_probs=117.4
Q ss_pred CCEEEEec-CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 158 RPLFVQFC-ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~-g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.|+...+. ..+++++.++|+. ++.||+.|+|++|| .+++. .++++++++.+ ++++.++.+
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 45555553 3689999988865 56799999999875 24667 88899998877 689999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.++++++++.+++.|+++|. +.. .+.||+..+++++.+++||++.+.+.++++++++++...||.|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 286 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE-------APV---WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIV 286 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE-------CCS---CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 899999999999999999999873 211 1468999999999999999999999999999999998889999
Q ss_pred eeehHHhhCCccch
Q 013813 314 LSAESLLENPALFA 327 (436)
Q Consensus 314 mIGRgal~nP~lf~ 327 (436)
++-... +.++-+.
T Consensus 287 ~ik~~~-GGit~~~ 299 (388)
T 2nql_A 287 QPEMGH-KGITNFI 299 (388)
T ss_dssp CCCHHH-HCHHHHH
T ss_pred EecCCC-CCHHHHH
Confidence 997666 6555443
No 84
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.99 E-value=5.9e-09 Score=99.31 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=113.3
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHcCCCcEEEEe--cCCCchhhhcCccccccc----------CChHHHHHHHHHHhc
Q 013813 157 DRPLFVQFCANDP--EILLNAARRVEPYCDYVDIN--LGCPQRIARRGNYGAFLM----------DNLPLVKSLVEKLAL 222 (436)
Q Consensus 157 e~plivQL~g~d~--e~~~~AA~~v~~g~D~IdLN--~GCP~~~~~~~~~Gs~Ll----------~~p~~v~eIv~av~~ 222 (436)
...++..|.+.+| +.+.+.++.+++++|.|+|+ ++||.- + |.... .+.....++++++++
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~----D--G~~~~~~~~~al~~g~~~~~~~~~i~~i~~ 77 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIA----D--GKTIQESHYRALKNGFKLREAFWIVKEFRR 77 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTT----S--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHT
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCC----C--CHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 3468899999998 58888887665449999999 678762 1 11100 156777899999999
Q ss_pred ccCccEEEEeccCC-ChhhHHHHHHHHHHcCccEEEeccCcc---------------------cc---------------
Q 013813 223 NLNVPVSCKIRVFP-NLQDTIKYAKMLEDAGCSLLAVHGRTR---------------------DE--------------- 265 (436)
Q Consensus 223 ~~~iPVsVKiRlg~-~~~d~~~~ak~le~aG~d~I~VHgRt~---------------------~~--------------- 265 (436)
.+++||.+...... ......++++.+.++|+|+|++|.-.. ..
T Consensus 78 ~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d 157 (248)
T 1geq_A 78 HSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTT 157 (248)
T ss_dssp TCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCS
T ss_pred hCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCC
Confidence 88899888753210 001125678888899999999874110 00
Q ss_pred -------cCCCCC------ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 266 -------KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 266 -------~~~~~g------~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
..+..| +..++.++++++.+++||++.|||++.+++.++++. |+|+|.+|++++..
T Consensus 158 ~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~-Gad~vivGsai~~~ 226 (248)
T 1geq_A 158 GFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKE-GANGVVVGSALVKI 226 (248)
T ss_dssp SEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHHHH
T ss_pred CeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHc-CCCEEEEcHHHHhh
Confidence 000111 123668889998889999999999999999999875 99999999998864
No 85
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.98 E-value=4.1e-09 Score=107.27 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=123.7
Q ss_pred CCCCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 156 EDRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
...|+..++++.+++++++.++. ++.|++.|.|++|| +++.-.+++++|++.+ ++++.|+.
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 45567788889999999988864 56799999999987 3666788999999988 58999999
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
+.+++.+++.++++.+++.|+ +|. + .. + +|+..+++++.+++||++++.+.+.++++++++..++|.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE-------q--P~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~ 263 (378)
T 3eez_A 197 NRGWTRQQALRVMRATEDLHV-MFE-------Q--PG--E-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEV 263 (378)
T ss_dssp TTCCCHHHHHHHHHHTGGGTC-CEE-------C--CS--S-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHhccCCe-EEe-------c--CC--C-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCE
Confidence 999999999999999999998 762 2 12 2 899999999999999999999999999999999988999
Q ss_pred eeeehHHhhCCccchhh
Q 013813 313 VLSAESLLENPALFAGF 329 (436)
Q Consensus 313 VmIGRgal~nP~lf~~i 329 (436)
|++..+.++.++-+.++
T Consensus 264 v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 264 FGIKLNRVGGLTRAARM 280 (378)
T ss_dssp EEEEHHHHTSHHHHHHH
T ss_pred EEeCchhcCCHHHHHHH
Confidence 99998887776655444
No 86
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.98 E-value=5.8e-10 Score=106.11 Aligned_cols=97 Identities=12% Similarity=0.259 Sum_probs=83.3
Q ss_pred EEEEeccCCCh------hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHH
Q 013813 228 VSCKIRVFPNL------QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDV 301 (436)
Q Consensus 228 VsVKiRlg~~~------~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda 301 (436)
..||+|.|+.. .++.++++.++++|++.|+++.++...... ..+++.+++++ .+++||+++|||.+.+++
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~---~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~ 88 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIENS---GENLPVLEKLS-EFAEHIQIGGGIRSLDYA 88 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHCC---CTTHHHHHHGG-GGGGGEEEESSCCSHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccCC---chhHHHHHHHH-hcCCcEEEECCCCCHHHH
Confidence 56888887631 478899999999999999999876643221 46799999999 789999999999999999
Q ss_pred HHHHHhcCcceeeeehHHhhCCccchhh
Q 013813 302 QKCLEETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 302 ~~~l~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
.++++. |||+|++|++++.||+++.++
T Consensus 89 ~~~~~~-Gad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 89 EKLRKL-GYRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp HHHHHT-TCCEEEECHHHHHCTTHHHHH
T ss_pred HHHHHC-CCCEEEECchHhhChHHHHHH
Confidence 999985 999999999999999998887
No 87
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.96 E-value=1e-08 Score=122.79 Aligned_cols=203 Identities=13% Similarity=0.135 Sum_probs=136.9
Q ss_pred HHHHhCCCcEEEccCC-CCCcHHHHHHHHHhCCCeEE--eCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHH-
Q 013813 96 HWTKLGRPKLIVAPMV-DNSELPFRMLCRRYGAEAAY--TPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEI- 171 (436)
Q Consensus 96 ~~~~lg~~~i~lAPM~-gvtd~~fR~l~~~~Ga~l~~--Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~- 171 (436)
+-+.+|+.||++|||. ++|+..+-..+.+.|.-.+. ..+.+.+.+.......+. ..++++|++++++-.+++.
T Consensus 576 ~t~~lg~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~---~~~~~~p~gvN~~~~~p~~~ 652 (2060)
T 2uva_G 576 MSRLLGVPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEK---AIPPGRGITVNLIYVNPRAM 652 (2060)
T ss_dssp HHHHHTSCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGG---GSCTTCCEEEEEETTCTTHH
T ss_pred hhhccccceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHh---hcccCCCeEecccccCcccc
Confidence 4566778999999999 79999988878888764333 333333333222111111 1124789999999876653
Q ss_pred --HHHHHHH-HcCCCcE--EEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 172 --LLNAARR-VEPYCDY--VDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 172 --~~~AA~~-v~~g~D~--IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
+.+..+. ++.|++. |.+..|.|. ++.+.++++.. ++++...+ . +..++.+.+.
T Consensus 653 ~~~~~~~~~~~~~gv~i~gv~~~~G~p~---------------~e~~~~~l~~~----gi~~i~~v-~--~~~~a~~~v~ 710 (2060)
T 2uva_G 653 GWQIPLLGRLRADGVPIEGLTIGAGVPS---------------IEVANEYIQTL----GIRHISFK-P--GSVDAIQQVI 710 (2060)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEESSCCC---------------HHHHHHHHHHS----CCSEEEEC-C--CSHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCcceEeecCCCCC---------------HHHHHHHHHHc----CCeEEEec-C--CHHHHHHHHH
Confidence 2344443 4568776 888877663 23344444432 67776442 2 3467777777
Q ss_pred HHHHcCccEEE---eccCcccccCCCC--CccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH-----------HhcCc
Q 013813 247 MLEDAGCSLLA---VHGRTRDEKDGKK--FRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL-----------EETGC 310 (436)
Q Consensus 247 ~le~aG~d~I~---VHgRt~~~~~~~~--g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l-----------~~tGa 310 (436)
.+.++|+|.|+ +.|....+-.+.. ...-+..+.+|++.+++|||+.|||.+.+++.++| .. ||
T Consensus 711 ~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~pal-GA 789 (2060)
T 2uva_G 711 NIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPM-PF 789 (2060)
T ss_dssp HHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCC-CC
T ss_pred HHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCC-CC
Confidence 78999999999 7665443221110 01235788999999999999999999999999999 75 99
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|||++|+.++.-.+
T Consensus 790 dgV~~GT~f~~t~E 803 (2060)
T 2uva_G 790 DGCMFGSRMMTAKE 803 (2060)
T ss_dssp SCEEESGGGGGBTT
T ss_pred CEEEEchhhhcCcC
Confidence 99999999988766
No 88
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.96 E-value=9.1e-09 Score=101.46 Aligned_cols=210 Identities=15% Similarity=0.132 Sum_probs=141.1
Q ss_pred HHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcc--cc--hhhccChhhh-h------hhhhccCCCCCEEEE
Q 013813 95 AHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPML--HS--RIFTESEKYR-N------EEFATCKEDRPLFVQ 163 (436)
Q Consensus 95 ~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temi--sa--~~l~~~~~~~-~------~~~~~~~~e~plivQ 163 (436)
.||+.+.++..+. |.++=|..+-+++.+.|.+.+|+--. +. .++....... . ..+. ...+.|+++.
T Consensus 8 ~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~-~~~~~PviaD 84 (295)
T 1xg4_A 8 AFRAALTKENPLQ--IVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRIT-DVCSLPLLVD 84 (295)
T ss_dssp HHHHHHHHSSSEE--EEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHH-HHCCSCEEEE
T ss_pred HHHHHHhCCCcEE--EecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHH-hhCCCCEEec
Confidence 3665543332233 56778899989999999998775422 21 1211111000 0 0011 1235799999
Q ss_pred e---cCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCccc-ccccCChHHHHHHHHHHhcccCccEEEEeccCC--
Q 013813 164 F---CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYG-AFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-- 236 (436)
Q Consensus 164 L---~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~G-s~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~-- 236 (436)
+ +|.+++...+.++.+ +.|+++|.|+-+|-.+ +.++.| ..|....+.+..|-.++....+.++.|.-|...
T Consensus 85 ~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k--~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~ 162 (295)
T 1xg4_A 85 ADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAK--RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALA 162 (295)
T ss_dssp CTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSC--CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHH
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCc--ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhh
Confidence 9 888999999888655 5699999999998432 223333 446665666666666655555778888888753
Q ss_pred --ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCC--CCHHHHHHHHHhcCcce
Q 013813 237 --NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV--RHMEDVQKCLEETGCEG 312 (436)
Q Consensus 237 --~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI--~s~eda~~~l~~tGaDg 312 (436)
..+++++-++.++++|+|.|.+++.+ +++.++++.+.+++|+++|.-. .++..-.+-|...|++.
T Consensus 163 ~~gl~~ai~ra~ay~eAGAd~i~~e~~~-----------~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~ 231 (295)
T 1xg4_A 163 VEGLDAAIERAQAYVEAGAEMLFPEAIT-----------ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAM 231 (295)
T ss_dssp HHCHHHHHHHHHHHHHTTCSEEEETTCC-----------SHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSE
T ss_pred hcCHHHHHHHHHHHHHcCCCEEEEeCCC-----------CHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCE
Confidence 23788888999999999999999763 4688999999999999988754 22222223345569999
Q ss_pred eeeehHHh
Q 013813 313 VLSAESLL 320 (436)
Q Consensus 313 VmIGRgal 320 (436)
|++|.+++
T Consensus 232 v~~~~~~~ 239 (295)
T 1xg4_A 232 ALYPLSAF 239 (295)
T ss_dssp EEESSHHH
T ss_pred EEEChHHH
Confidence 99998865
No 89
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.96 E-value=3.3e-09 Score=111.36 Aligned_cols=136 Identities=19% Similarity=0.244 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHH
Q 013813 169 PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKM 247 (436)
Q Consensus 169 ~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~ 247 (436)
.+...++..+++.|+|.|.+|++ .| .+....++++++++.+ ++||.++- +.+. +.++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~----------~G-----~~~~~~e~i~~i~~~~p~~pvi~g~--~~t~----e~a~~ 294 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTA----------HG-----HSRRVIETLEMIKADYPDLPVVAGN--VATP----EGTEA 294 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCS----------CC-----SSHHHHHHHHHHHHHCTTSCEEEEE--ECSH----HHHHH
T ss_pred HhHHHHHHHHHHhCCCEEEEEec----------CC-----chHHHHHHHHHHHHHCCCceEEeCC--cCCH----HHHHH
Confidence 33344444567789999999864 12 3456778899998888 79999872 2232 34578
Q ss_pred HHHcCccEEEeccCcc--c---ccCCCCCccCHHHHHHHHhh---CCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 248 LEDAGCSLLAVHGRTR--D---EKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 248 le~aG~d~I~VHgRt~--~---~~~~~~g~ad~~~i~~ik~~---~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
+.++|+|+|.|.+... . ...+ .+.+.+..+..+++. +++|||+.|||.++.|+.+++.. |||+|++||++
T Consensus 295 l~~~G~d~I~v~~~~G~~~~~~~~~~-~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~-GAd~V~iGr~~ 372 (494)
T 1vrd_A 295 LIKAGADAVKVGVGPGSICTTRVVAG-VGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAA-GAESVMVGSIF 372 (494)
T ss_dssp HHHTTCSEEEECSSCSTTCHHHHHHC-CCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-TCSEEEESHHH
T ss_pred HHHcCCCEEEEcCCCCccccccccCC-CCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEECHHH
Confidence 8899999999833211 0 0011 123445555555544 68999999999999999999996 99999999999
Q ss_pred hhCCccch
Q 013813 320 LENPALFA 327 (436)
Q Consensus 320 l~nP~lf~ 327 (436)
+.+|++..
T Consensus 373 l~~~e~~~ 380 (494)
T 1vrd_A 373 AGTEEAPG 380 (494)
T ss_dssp HTBTTSSS
T ss_pred hcCCcCCc
Confidence 99988744
No 90
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.95 E-value=6.5e-09 Score=105.51 Aligned_cols=144 Identities=10% Similarity=0.122 Sum_probs=120.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 157 DRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
..|+...+...+++.+.++|+. ++.||+.|.|++||| +++...++++++++.+ ++++.++.+
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 134 PVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4566666666889999988865 466999999999986 4678889999999987 589999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.++++++++.++ .|+ +| ++ .. + ||+..+++++.+++||++++.+.+.++++++++...+|.|
T Consensus 199 ~~~~~~~a~~~~~~l~-~~i-~i-------Eq--P~--~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 264 (378)
T 2qdd_A 199 RAWTPAIAVEVLNSVR-ARD-WI-------EQ--PC--Q-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGV 264 (378)
T ss_dssp TCCCHHHHHHHHTSCC-CCC-EE-------EC--CS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHhC-CCc-EE-------Ec--CC--C-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEE
Confidence 8999999999999998 888 66 22 22 3 8999999999999999999999999999999999889999
Q ss_pred eeehHHhhCCccchhh
Q 013813 314 LSAESLLENPALFAGF 329 (436)
Q Consensus 314 mIGRgal~nP~lf~~i 329 (436)
++-.+.++.++-+.++
T Consensus 265 ~ik~~~~GGi~~~~~i 280 (378)
T 2qdd_A 265 KIKPNRVGGLTRARQI 280 (378)
T ss_dssp EECHHHHTSHHHHHHH
T ss_pred EecccccCCHHHHHHH
Confidence 9988877776655443
No 91
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.94 E-value=2.9e-09 Score=112.55 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=100.1
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCCh
Q 013813 160 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNL 238 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~ 238 (436)
+.+.+ |...+.+..+..+++.|+|.|.||..+|. ...+.++++++++.. ++||.++- .
T Consensus 247 V~aav-g~~~d~~era~aLveaGvd~I~Id~a~g~---------------~~~v~~~i~~i~~~~~~~~vi~g~-----v 305 (511)
T 3usb_A 247 VGAAV-GVTADAMTRIDALVKASVDAIVLDTAHGH---------------SQGVIDKVKEVRAKYPSLNIIAGN-----V 305 (511)
T ss_dssp CEEEE-CSSTTHHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTSEEEEEE-----E
T ss_pred eeeee-eeccchHHHHHHHHhhccceEEecccccc---------------hhhhhhHHHHHHHhCCCceEEeee-----e
Confidence 33444 33445566666778889999999977652 345778888888876 47998872 1
Q ss_pred hhHHHHHHHHHHcCccEEEec------cCcccccCCCCCccCHHHHHHHHh---hCCCcEEEccCCCCHHHHHHHHHhcC
Q 013813 239 QDTIKYAKMLEDAGCSLLAVH------GRTRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETG 309 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VH------gRt~~~~~~~~g~ad~~~i~~ik~---~~~iPVianGGI~s~eda~~~l~~tG 309 (436)
.+.+.|+.+.++|+|+|.|- ..++.. .+.+.+++..+.++++ ..++|||+.|||.+..|+.+++.. |
T Consensus 306 -~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~--~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~-G 381 (511)
T 3usb_A 306 -ATAEATKALIEAGANVVKVGIGPGSICTTRVV--AGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAA-G 381 (511)
T ss_dssp -CSHHHHHHHHHHTCSEEEECSSCSTTCCHHHH--HCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHT-T
T ss_pred -ccHHHHHHHHHhCCCEEEECCCCccccccccc--cCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHh-C
Confidence 13456888999999999881 111110 1123456777766644 357999999999999999999986 9
Q ss_pred cceeeeehHHhhCCc
Q 013813 310 CEGVLSAESLLENPA 324 (436)
Q Consensus 310 aDgVmIGRgal~nP~ 324 (436)
||+||+|++++.-..
T Consensus 382 A~~V~vGs~~~~~~e 396 (511)
T 3usb_A 382 AHVVMLGSMFAGVAE 396 (511)
T ss_dssp CSEEEESTTTTTBTT
T ss_pred chhheecHHHhcCcc
Confidence 999999999866554
No 92
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.93 E-value=2.2e-08 Score=101.63 Aligned_cols=137 Identities=12% Similarity=0.121 Sum_probs=115.3
Q ss_pred CCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++.++|+. ++.|++.|.|++||+. +| ...+++...++++++++++ ++++.|+..-+++.+++++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~ 218 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALA 218 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 689999988865 4669999999999864 22 3458899999999999987 6899999998999999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCC-HHHHHHHHHhcCcceeeeehHHhhC
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRH-MEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s-~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
+++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+ .++++++++...+|.|++--.-++.
T Consensus 219 ~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 219 LGRGLEKLGFDWIE-------EP--M-DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HHHHHHTTTCSEEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCEEe-------CC--C-ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 99999999999873 21 1 135899999999999999999999999 9999999999889999986554443
No 93
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.92 E-value=1.1e-08 Score=103.51 Aligned_cols=144 Identities=9% Similarity=0.135 Sum_probs=119.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 157 DRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
..|+..++.+.+++++.++|+. ++.||+.|.|++|+ +++...++++++++.+ ++++.++.+
T Consensus 130 ~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 193 (369)
T 2p8b_A 130 EFPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVN 193 (369)
T ss_dssp CEECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred ceeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 3455578888899999988864 56799999999873 4677888999998887 689999998
Q ss_pred cCCChhhHH-HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 234 VFPNLQDTI-KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 234 lg~~~~d~~-~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.+++.++++ ++++.+++.|+++|. +. . .+.||+..+++++.+++||++++.+.+.++++++++...+|+
T Consensus 194 ~~~~~~~a~~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~ 263 (369)
T 2p8b_A 194 QGWKNSANTLTALRSLGHLNIDWIE-------QP--V-IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADK 263 (369)
T ss_dssp TTTBSHHHHHHHHHTSTTSCCSCEE-------CC--B-CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCcEEE-------CC--C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCE
Confidence 899989999 999999999999873 21 1 146899999999999999999999999999999999888999
Q ss_pred eeeehHHhhCCccc
Q 013813 313 VLSAESLLENPALF 326 (436)
Q Consensus 313 VmIGRgal~nP~lf 326 (436)
|++--+-++..+-+
T Consensus 264 v~ik~~~~GGit~~ 277 (369)
T 2p8b_A 264 VNIKLMKCGGIYPA 277 (369)
T ss_dssp EEECHHHHTSHHHH
T ss_pred EEeecchhCCHHHH
Confidence 99987666555433
No 94
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.92 E-value=1.8e-08 Score=103.10 Aligned_cols=149 Identities=11% Similarity=0.064 Sum_probs=121.0
Q ss_pred CCCEEEEec-CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCCh-HHHHHHHHHHhccc--CccEEEE
Q 013813 157 DRPLFVQFC-ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNL-PLVKSLVEKLALNL--NVPVSCK 231 (436)
Q Consensus 157 e~plivQL~-g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p-~~v~eIv~av~~~~--~iPVsVK 231 (436)
..|+...+. +.+++++.++|+. ++.||+.|.|++ ||. |+ ++ +...+++++|++.+ ++++.++
T Consensus 133 ~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 133 GKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp CBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 345554444 6789999988864 567999999996 764 32 45 77788999998887 6899999
Q ss_pred eccCC--ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHh-hCCCcEEEccCCCCHHHHHHHHHhc
Q 013813 232 IRVFP--NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALRIPVLANGNVRHMEDVQKCLEET 308 (436)
Q Consensus 232 iRlg~--~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~-~~~iPVianGGI~s~eda~~~l~~t 308 (436)
.+.++ +.++++++++.+++.|+++|- +.. .+.||+..+++++ .+++||++.+.+.+.++++++++..
T Consensus 200 an~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~ 269 (401)
T 2hzg_A 200 VGQIFGEDVEAAAARLPTLDAAGVLWLE-------EPF---DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG 269 (401)
T ss_dssp CTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CCS---CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC
Confidence 99999 999999999999999999873 211 1468999999999 8999999999999999999999998
Q ss_pred CcceeeeehHHhhCCccchh
Q 013813 309 GCEGVLSAESLLENPALFAG 328 (436)
Q Consensus 309 GaDgVmIGRgal~nP~lf~~ 328 (436)
.+|.|++-...++..+-+.+
T Consensus 270 ~~d~v~ik~~~~GGit~~~~ 289 (401)
T 2hzg_A 270 RIGFIQIDCGRIGGLGPAKR 289 (401)
T ss_dssp CCSEEEECHHHHTSHHHHHH
T ss_pred CCCEEEeCcchhCCHHHHHH
Confidence 89999998777766654433
No 95
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.89 E-value=2e-08 Score=97.69 Aligned_cols=162 Identities=14% Similarity=0.205 Sum_probs=110.7
Q ss_pred CCCCEEEEecCCCH--HHHHHHHHHHc-CCCcEEEEe--cCCCch---hhhcCccccccc--CChHHHHHHHHHHhcc-c
Q 013813 156 EDRPLFVQFCANDP--EILLNAARRVE-PYCDYVDIN--LGCPQR---IARRGNYGAFLM--DNLPLVKSLVEKLALN-L 224 (436)
Q Consensus 156 ~e~plivQL~g~d~--e~~~~AA~~v~-~g~D~IdLN--~GCP~~---~~~~~~~Gs~Ll--~~p~~v~eIv~av~~~-~ 224 (436)
....++.-|...+| +...+.++.++ .|+|.|||. ++-|.- .+.+-. -.+|. -+.+.+.++++++++. +
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~-~~AL~~G~~~~~~~~~v~~ir~~~~ 94 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGAN-LRSLAAGTTSSDCFDIITKVRAQHP 94 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 45668888888877 88888887664 689999999 455551 111100 00111 2456788999999987 7
Q ss_pred CccEEEEeccCCCh---hhHHHHHHHHHHcCccEEEeccCcc-------------------------------------c
Q 013813 225 NVPVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTR-------------------------------------D 264 (436)
Q Consensus 225 ~iPVsVKiRlg~~~---~d~~~~ak~le~aG~d~I~VHgRt~-------------------------------------~ 264 (436)
++|+.+-.- ++. -....|++.+.++|+|.++++.-.. .
T Consensus 95 ~~Pivlm~Y--~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~ 172 (267)
T 3vnd_A 95 DMPIGLLLY--ANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGE 172 (267)
T ss_dssp TCCEEEEEC--HHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEec--CcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 899887521 121 1236788889999999988732110 0
Q ss_pred ------ccCCCCC-----c-cCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 265 ------EKDGKKF-----R-ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 265 ------~~~~~~g-----~-ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
...+.+| + ...+.++++++.+++||+..|||++++++.+.+.. |||+|.+|+++..
T Consensus 173 gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~-gADgvVVGSaiv~ 240 (267)
T 3vnd_A 173 GYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKA-GAAGAISGSAVVK 240 (267)
T ss_dssp SCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHT-TCSEEEECHHHHH
T ss_pred CcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHc-CCCEEEECHHHHH
Confidence 0011111 1 12577899999889999999999999999988876 9999999998763
No 96
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.87 E-value=3.7e-08 Score=99.55 Aligned_cols=141 Identities=13% Similarity=0.184 Sum_probs=114.8
Q ss_pred CEEEEecCCCHHHHHHHHH-HHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 159 PLFVQFCANDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~-~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
|+..-+.+.+++++.++|+ .++ .||+.|.|++||+ +++...++++++++.+ ++++.++.+.
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 3334455678999988885 456 7999999999874 3456678888888876 4889999888
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++++++.+++.|+++|. +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|+
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE-------qP--~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 267 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVE-------QP--V-PRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFS 267 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEE-------CC--S-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCcceEe-------CC--C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999873 21 1 14689999999999999999999999999999999998899999
Q ss_pred eehHHhhCCc
Q 013813 315 SAESLLENPA 324 (436)
Q Consensus 315 IGRgal~nP~ 324 (436)
+--.-++...
T Consensus 268 ik~~~~GGit 277 (370)
T 1nu5_A 268 LKLCNMGGIA 277 (370)
T ss_dssp ECHHHHTSHH
T ss_pred EchhhcCCHH
Confidence 8755555444
No 97
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.87 E-value=3.6e-08 Score=100.64 Aligned_cols=139 Identities=10% Similarity=0.137 Sum_probs=116.9
Q ss_pred CCEEEEe-c-CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 158 RPLFVQF-C-ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 158 ~plivQL-~-g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
.|+...+ . +.+++++++.++. ++.|++.|.|++|| +++...+++++|++.+ ++++.|+.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 5777777 4 6899999988864 56799999999987 4677788899999887 68999999
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHH-hhCCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK-NALRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik-~~~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
+.+++.++++++++.+++.|+++|. +. . .+.||+..++++ +.+++||++.+.+.+.++++++++...+|
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d 272 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE-------EP--L-SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAID 272 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE-------SC--S-CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCS
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE-------CC--C-CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999983 21 1 135799999999 99999999999999999999999988899
Q ss_pred eeeeehHHhhC
Q 013813 312 GVLSAESLLEN 322 (436)
Q Consensus 312 gVmIGRgal~n 322 (436)
.|++--+..+.
T Consensus 273 ~v~ik~~~~GG 283 (389)
T 3ozy_A 273 VLQADASRAGG 283 (389)
T ss_dssp EECCCTTTSSC
T ss_pred EEEeCccccCC
Confidence 99986444433
No 98
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.86 E-value=4.4e-08 Score=96.09 Aligned_cols=148 Identities=20% Similarity=0.289 Sum_probs=97.1
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 158 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
.|+++.+.+ .+.++. .+.|+++|+++.++|...... .|..+.+.++.+ +.+++.+++|+.++++.+.
T Consensus 22 ~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~--~G~~~~~~~~~i----~~i~~~~~~Pvi~~~~~~~ 89 (297)
T 2zbt_A 22 GGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRAQ--GGVARMSDPKII----KEIMAAVSIPVMAKVRIGH 89 (297)
T ss_dssp TEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHHT--TCCCCCCCHHHH----HHHHTTCSSCEEEEEETTC
T ss_pred CCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHhh--cCCccCCCHHHH----HHHHHhcCCCeEEEeccCC
Confidence 578887765 334433 355899999987777643222 255566776654 4556677899988876542
Q ss_pred ChhhHHHHHHHH---------------------------------------------HHcCccEEEeccC----------
Q 013813 237 NLQDTIKYAKML---------------------------------------------EDAGCSLLAVHGR---------- 261 (436)
Q Consensus 237 ~~~d~~~~ak~l---------------------------------------------e~aG~d~I~VHgR---------- 261 (436)
.+.++.+ .++|+|+|.+||-
T Consensus 90 -----~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~ 164 (297)
T 2zbt_A 90 -----FVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAV 164 (297)
T ss_dssp -----HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHH
T ss_pred -----HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHH
Confidence 2223333 4445555544421
Q ss_pred ----------------cccccC--CCCCccCHHHHHHHHhhCCCcEE--EccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 262 ----------------TRDEKD--GKKFRADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 262 ----------------t~~~~~--~~~g~ad~~~i~~ik~~~~iPVi--anGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
+..... ....+.+++.++++++.+++||+ +.|||.+.+++.++++. |||+|++|++++.
T Consensus 165 ~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~a-GadgvvvGsai~~ 243 (297)
T 2zbt_A 165 RHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMMHL-GMDGVFVGSGIFK 243 (297)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHT-TCSEEEECGGGGG
T ss_pred hhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHc-CCCEEEEchHHhC
Confidence 000000 00013467889999998899998 99999999999999986 9999999999986
Q ss_pred CC
Q 013813 322 NP 323 (436)
Q Consensus 322 nP 323 (436)
.+
T Consensus 244 ~~ 245 (297)
T 2zbt_A 244 SG 245 (297)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 99
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.84 E-value=4.6e-08 Score=98.69 Aligned_cols=141 Identities=13% Similarity=0.154 Sum_probs=116.0
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+..++.+.+++++.+.|+. ++.||+.|.|++||+ +++...++++++++.+ ++++.++.+.
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 445567778899999888854 566999999998872 4677788888988877 6899999988
Q ss_pred CCChhhHHHHHHHHHH--cCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 235 FPNLQDTIKYAKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 235 g~~~~d~~~~ak~le~--aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
+++.++++++++.+++ .|+++|- +. . .+.||+..+++++.+++||++.+.+.+.+++.++++...+|.
T Consensus 195 ~~~~~~a~~~~~~l~~~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 264 (366)
T 1tkk_A 195 GWRPKEAVTAIRKMEDAGLGIELVE-------QP--V-HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADL 264 (366)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEEEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCHHHHHHHHHHHhhcCCCceEEE-------CC--C-CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCE
Confidence 9999999999999999 8888772 21 1 145899999999999999999999999999999999888999
Q ss_pred eeeehHHhhCC
Q 013813 313 VLSAESLLENP 323 (436)
Q Consensus 313 VmIGRgal~nP 323 (436)
|++--.-.+..
T Consensus 265 v~ik~~~~GGi 275 (366)
T 1tkk_A 265 INIKLMKAGGI 275 (366)
T ss_dssp EEECHHHHTSH
T ss_pred EEeehhhhcCH
Confidence 99865544433
No 100
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.84 E-value=5.8e-08 Score=98.17 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=117.8
Q ss_pred CCCCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 156 EDRPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
...|+...+.+.+++++.++|+. ++.||+.|.|++|. +++...++++++++.+ ++++.++.
T Consensus 134 ~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 134 TRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp SCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 34567777888899999988865 46799999999873 3678889999999988 58999999
Q ss_pred ccCCChhhHHHHHHHH-HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 233 RVFPNLQDTIKYAKML-EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~l-e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
+.+++.++++++++.+ ++.|+ +|. + .. + ||+..+++++.+++||++.+.+.+.++++++++...+|
T Consensus 198 n~~~~~~~a~~~~~~l~~~~~i-~iE-------~--P~--~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 264 (371)
T 2ps2_A 198 NGKLSVETALRLLRLLPHGLDF-ALE-------A--PC--A-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAE 264 (371)
T ss_dssp TTBCCHHHHHHHHHHSCTTCCC-EEE-------C--CB--S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred CCCcCHHHHHHHHHHHHhhcCC-cCc-------C--Cc--C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 8899999999999999 99998 762 2 12 3 89999999999999999999999999999999998899
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
.|++--+-++...
T Consensus 265 ~v~ik~~~~GGit 277 (371)
T 2ps2_A 265 GIDLKISKAGGLT 277 (371)
T ss_dssp EEEEEHHHHTSHH
T ss_pred EEEechhhcCCHH
Confidence 9999766555443
No 101
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.83 E-value=4.9e-08 Score=99.61 Aligned_cols=134 Identities=13% Similarity=0.124 Sum_probs=111.8
Q ss_pred CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
+.+++++.++|+. ++.||+.|.|+.|+. .++...++++++++.+ ++++.|+...+++.++++
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 211 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTK 211 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHH
Confidence 5789999988865 567999999997731 1578889999999877 689999999899999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
++++.+++.|+++|- +. . .+.+|+..+++++.+++||++.+.+.++++++++++...+|.|++--+-++.
T Consensus 212 ~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 281 (391)
T 2qgy_A 212 SFLKEVSSFNPYWIE-------EP--V-DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGG 281 (391)
T ss_dssp HHHHHHGGGCCSEEE-------CS--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSC
T ss_pred HHHHHHHhcCCCeEe-------CC--C-ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCC
Confidence 999999999999873 11 1 1358999999999999999999999999999999998889999986554444
Q ss_pred Cc
Q 013813 323 PA 324 (436)
Q Consensus 323 P~ 324 (436)
..
T Consensus 282 it 283 (391)
T 2qgy_A 282 LI 283 (391)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 102
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.83 E-value=4.4e-08 Score=100.41 Aligned_cols=147 Identities=16% Similarity=0.248 Sum_probs=118.1
Q ss_pred CCCEEEE-ec-C-C-------CHHHHHHHHHH-HcCCCcEEEEec------CC----CchhhhcCccccccc-CChHHHH
Q 013813 157 DRPLFVQ-FC-A-N-------DPEILLNAARR-VEPYCDYVDINL------GC----PQRIARRGNYGAFLM-DNLPLVK 214 (436)
Q Consensus 157 e~plivQ-L~-g-~-------d~e~~~~AA~~-v~~g~D~IdLN~------GC----P~~~~~~~~~Gs~Ll-~~p~~v~ 214 (436)
..|+... +. | . +++++.++|+. ++.||+.|.|+. |+ |..+ ..||+... ++++...
T Consensus 129 ~vp~y~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~---~~~GG~~~~~~~~~~~ 205 (410)
T 2gl5_A 129 KLRTYASQLQFGWGDKNHILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRN---RNYSGLLLADQLKMGE 205 (410)
T ss_dssp SEEEEEECGGGCCTTCCSCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCC---GGGGSCCCHHHHHHHH
T ss_pred ceeEeEecccCCccccccccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccccccc---ccccCccchhHHHHHH
Confidence 3456555 65 4 4 89999988864 567999999996 66 3332 24777664 4678888
Q ss_pred HHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc
Q 013813 215 SLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 292 (436)
Q Consensus 215 eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian 292 (436)
+++++|++.+ ++++.++..-+++.++++++++.+++.|+++|. ++ . .+.||+..+++++.+++||++.
T Consensus 206 e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE------~P---~-~~~~~~~~~~l~~~~~iPIa~d 275 (410)
T 2gl5_A 206 ARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE------EP---I-HPLNSDNMQKVSRSTTIPIATG 275 (410)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE------CS---S-CSSCHHHHHHHHHHCSSCEEEC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEE------CC---C-ChhhHHHHHHHHhhCCCCEEec
Confidence 9999999887 589999988889999999999999999998773 11 1 1357999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCcceeeee
Q 013813 293 GNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 293 GGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+.+.+.++++++++...+|.|++-
T Consensus 276 E~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 276 ERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp TTCCTTHHHHHHHHTTCCSEECCC
T ss_pred CCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999998789999863
No 103
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.83 E-value=9.9e-08 Score=91.74 Aligned_cols=145 Identities=17% Similarity=0.199 Sum_probs=108.7
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHcC---CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEe
Q 013813 157 DRPLFVQFCA-NDPEILLNAARRVEP---YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI 232 (436)
Q Consensus 157 e~plivQL~g-~d~e~~~~AA~~v~~---g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKi 232 (436)
+..+..+-.| .+.++....|++..+ +.+.|-|-.-. + --.++.|+....+..+.+.+. ++.|..-+
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~-------d--~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~ 142 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLA-------D--QKTLFPNVVETLKAAEQLVKD-GFDVMVYT 142 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBS-------C--TTTCCBCHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeec-------C--ccccCcCHHHHHHHHHHHHHC-CCEEEEEe
Confidence 4556667665 578999999998865 56888776421 1 124677888877777776543 44444221
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.+...++++++++|++.|..+|..... +.|-.++++|+.+++..++|||+.|||.+++|+..+++. |||+
T Consensus 143 ------~dd~~~akrl~~~G~~aVmPlg~pIGs---G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeL-GAdg 212 (265)
T 1wv2_A 143 ------SDDPIIARQLAEIGCIAVMPLAGLIGS---GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMEL-GCEA 212 (265)
T ss_dssp ------CSCHHHHHHHHHSCCSEEEECSSSTTC---CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHH-TCSE
T ss_pred ------CCCHHHHHHHHHhCCCEEEeCCccCCC---CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHc-CCCE
Confidence 112567999999999999888774332 233568999999999999999999999999999999997 9999
Q ss_pred eeeehHHhh
Q 013813 313 VLSAESLLE 321 (436)
Q Consensus 313 VmIGRgal~ 321 (436)
|++|+++..
T Consensus 213 VlVgSAI~~ 221 (265)
T 1wv2_A 213 VLMNTAIAH 221 (265)
T ss_dssp EEESHHHHT
T ss_pred EEEChHHhC
Confidence 999999854
No 104
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.81 E-value=2e-08 Score=92.94 Aligned_cols=138 Identities=14% Similarity=0.195 Sum_probs=92.5
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 157 DRPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
+.|+++.+.+.+.+++.+.++.+. .|++.|+++++||.. .+.++.+++.+ ++++.+-
T Consensus 9 ~~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~-- 68 (205)
T 1wa3_A 9 KHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAG-- 68 (205)
T ss_dssp HHCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEE--
T ss_pred hCCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEec--
Confidence 368999999999999999997765 479999999988742 23444454443 2333222
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcc-------------------ccc--------------CCCCCccCHHHHHH
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTR-------------------DEK--------------DGKKFRADWNAIKA 280 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~-------------------~~~--------------~~~~g~ad~~~i~~ 280 (436)
.-.+.+ -++.+.++|+|+| +++... ... ........++.+++
T Consensus 69 ~v~~~~----~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~ 143 (205)
T 1wa3_A 69 TVTSVE----QCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKA 143 (205)
T ss_dssp SCCSHH----HHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHH
T ss_pred ccCCHH----HHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHH
Confidence 111222 2445556777777 554332 000 00000123567788
Q ss_pred HHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 281 VKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 281 ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
+++.+ ++||++.|||+ .+++.++++. |+|+|.+|++++.
T Consensus 144 l~~~~~~~pvia~GGI~-~~~~~~~~~~-Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 144 MKGPFPNVKFVPTGGVN-LDNVCEWFKA-GVLAVGVGSALVK 183 (205)
T ss_dssp HHTTCTTCEEEEBSSCC-TTTHHHHHHH-TCSCEEECHHHHC
T ss_pred HHHhCCCCcEEEcCCCC-HHHHHHHHHC-CCCEEEECccccC
Confidence 88877 89999999997 7899999986 9999999999987
No 105
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.79 E-value=4.5e-08 Score=93.88 Aligned_cols=152 Identities=11% Similarity=0.139 Sum_probs=110.1
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEecc--
Q 013813 158 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV-- 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRl-- 234 (436)
.++-+|++|.= ..+.++.+++..|+|-|-|| +...++|+++.++.+...... -+-+.+|.+-
T Consensus 74 ~~~pl~vGGGI-rs~e~~~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~ 138 (243)
T 4gj1_A 74 VSVNLQVGGGI-RSKEEVKALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTILKEDY 138 (243)
T ss_dssp CCSEEEEESSC-CCHHHHHHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSE
T ss_pred cCCCeEecccc-ccHHHHHHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEeCCCC
Confidence 44568887753 23445556778899999887 556789999999998875432 2233333221
Q ss_pred -----CCC---hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHH
Q 013813 235 -----FPN---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 235 -----g~~---~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l 305 (436)
+|. ..+..++++.+++.|+..|.++...++++.. .+|++.++.+++.+ ++|||++|||.+.+|++++
T Consensus 139 ~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~---G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l- 214 (243)
T 4gj1_A 139 VVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ---GVNVRLYKLIHEIFPNICIQASGGVASLKDLENL- 214 (243)
T ss_dssp EEC--------CCBHHHHHHHHHTTTCCEEEEEETTC--------CCCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-
T ss_pred EEEecCceecccchHHHHHHHHhhcCCcEEEeeeeccccccc---CCCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-
Confidence 221 2356889999999999999999888876544 47999999999876 7999999999999999885
Q ss_pred HhcCcceeeeehHHhhCCccchhh
Q 013813 306 EETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
+ .+++||.+|++++.+-.-+.++
T Consensus 215 ~-~~~~gvivg~Al~~g~i~l~ea 237 (243)
T 4gj1_A 215 K-GICSGVIVGKALLDGVFSVEEG 237 (243)
T ss_dssp T-TTCSEEEECHHHHTTSSCHHHH
T ss_pred H-ccCchhehHHHHHCCCCCHHHH
Confidence 4 4799999999998765544443
No 106
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.79 E-value=7.9e-09 Score=98.51 Aligned_cols=89 Identities=19% Similarity=0.331 Sum_probs=76.8
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+..++++.++++|++.|+++..+.... ....+++.++++++.+++||+++|||.++++++++++. |||+|++|++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~-Gad~V~lg~~ 105 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE---KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILR-GADKVSINTA 105 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS---HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHT-TCSEEEESHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc---CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHc-CCCEEEEChH
Confidence 5788899999999999999997664321 12467888999999999999999999999999999986 9999999999
Q ss_pred HhhCCccchhhhh
Q 013813 319 LLENPALFAGFRT 331 (436)
Q Consensus 319 al~nP~lf~~i~~ 331 (436)
++.+|+++.++..
T Consensus 106 ~l~~p~~~~~~~~ 118 (253)
T 1thf_D 106 AVENPSLITQIAQ 118 (253)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HHhChHHHHHHHH
Confidence 9999998877653
No 107
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.78 E-value=1.7e-07 Score=90.98 Aligned_cols=158 Identities=15% Similarity=0.197 Sum_probs=107.8
Q ss_pred CCCEEEEecCCCH--HHHHHHHHHHc-CCCcEEEEec--CCCch---hhh-----cCcccccccCChHHHHHHHHHHhcc
Q 013813 157 DRPLFVQFCANDP--EILLNAARRVE-PYCDYVDINL--GCPQR---IAR-----RGNYGAFLMDNLPLVKSLVEKLALN 223 (436)
Q Consensus 157 e~plivQL~g~d~--e~~~~AA~~v~-~g~D~IdLN~--GCP~~---~~~-----~~~~Gs~Ll~~p~~v~eIv~av~~~ 223 (436)
+..++.-|...+| +...+.++.++ .|+|.|+|+. +-|.- .+. .-..| -+.....++++++++.
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G----~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAG----VTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhc
Confidence 4567888888887 88888887664 5899999985 33320 000 00011 1456677899999988
Q ss_pred -cCccEEEEeccCCCh---hhHHHHHHHHHHcCccEEEeccCccc---------------------c-------------
Q 013813 224 -LNVPVSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAVHGRTRD---------------------E------------- 265 (436)
Q Consensus 224 -~~iPVsVKiRlg~~~---~d~~~~ak~le~aG~d~I~VHgRt~~---------------------~------------- 265 (436)
+++||.+=. .++. ....++++.+.++|+|+|++|.-+.+ +
T Consensus 92 ~~~~Pv~lm~--y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~ 169 (268)
T 1qop_A 92 HPTIPIGLLM--YANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASY 169 (268)
T ss_dssp CSSSCEEEEE--CHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHH
T ss_pred CCCCCEEEEE--cccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhh
Confidence 789986611 0110 12257788888899998887532210 0
Q ss_pred ---------cCCCCC------ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 266 ---------KDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 266 ---------~~~~~g------~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
..+.+| ....+.++++++.+++||+..|||+|++++.+++.. |||+|++|++++.
T Consensus 170 ~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~a-gAD~vVVGSai~~ 239 (268)
T 1qop_A 170 GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRA-GAAGAISGSAIVK 239 (268)
T ss_dssp CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHH
T ss_pred CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHc-CCCEEEEChHHhh
Confidence 001122 123688999999889999999999999999998886 9999999999865
No 108
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.77 E-value=2.7e-08 Score=97.04 Aligned_cols=164 Identities=12% Similarity=0.176 Sum_probs=105.9
Q ss_pred CCCCEEEEecCCC--HHHHHHHHHHH-cCCCcEEEEec--CCCch---hhhcCccccccc--CChHHHHHHHHHHhcc-c
Q 013813 156 EDRPLFVQFCAND--PEILLNAARRV-EPYCDYVDINL--GCPQR---IARRGNYGAFLM--DNLPLVKSLVEKLALN-L 224 (436)
Q Consensus 156 ~e~plivQL~g~d--~e~~~~AA~~v-~~g~D~IdLN~--GCP~~---~~~~~~~Gs~Ll--~~p~~v~eIv~av~~~-~ 224 (436)
....++.=|...+ .+...+.++.+ +.|+|.|||.+ +-|.- ...+ ..-.+|. -+.+.+.++++++++. .
T Consensus 18 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~-a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQG-ANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp TBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHH-HHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHH-HHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 3445666666555 57888888766 45899999995 44541 1111 0001111 2456788899999877 7
Q ss_pred CccEEEEeccCC-ChhhHHHHHHHHHHcCccEEEeccC--------------------------ccc-----------c-
Q 013813 225 NVPVSCKIRVFP-NLQDTIKYAKMLEDAGCSLLAVHGR--------------------------TRD-----------E- 265 (436)
Q Consensus 225 ~iPVsVKiRlg~-~~~d~~~~ak~le~aG~d~I~VHgR--------------------------t~~-----------~- 265 (436)
++|+.+-.-..+ ..-...+|++.+.++|+|++++..- +.. .
T Consensus 97 ~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gf 176 (271)
T 3nav_A 97 ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGY 176 (271)
T ss_dssp TSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSC
T ss_pred CCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCe
Confidence 899987521110 0012356888888888888776110 100 0
Q ss_pred -----cCCCCCc------cCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 266 -----KDGKKFR------ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 266 -----~~~~~g~------ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
..+.+|. ...++++++++.+++||+..|||++++++.+.+.. |||||.||+++..
T Consensus 177 iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~-gADgvIVGSAiv~ 242 (271)
T 3nav_A 177 TYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEA-GAAGAISGSAVVK 242 (271)
T ss_dssp EEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHT-TCSEEEESHHHHH
T ss_pred EEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc-CCCEEEECHHHHH
Confidence 0111111 12467889999889999999999999999988876 9999999999863
No 109
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.77 E-value=1e-08 Score=97.69 Aligned_cols=89 Identities=21% Similarity=0.341 Sum_probs=76.8
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.++.++++.++++|++.|.++....... ....+++.++++++.+++||+++|||.+.++++++++. |||+|++|++
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~-Gad~V~lg~~ 106 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHE---ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLS-GADKVSVNSA 106 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTT---CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHH-TCSEEEECHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcccc---CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc-CCCEEEEChH
Confidence 5788999999999999999987654321 12456888999999999999999999999999999986 8999999999
Q ss_pred HhhCCccchhhhh
Q 013813 319 LLENPALFAGFRT 331 (436)
Q Consensus 319 al~nP~lf~~i~~ 331 (436)
++.+|+++.++..
T Consensus 107 ~l~~p~~~~~~~~ 119 (252)
T 1ka9_F 107 AVRRPELIRELAD 119 (252)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HHhCcHHHHHHHH
Confidence 9999998887654
No 110
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.75 E-value=4.3e-08 Score=99.92 Aligned_cols=140 Identities=12% Similarity=0.151 Sum_probs=114.2
Q ss_pred CCCHHHHHHHHHH-HcCCCcEEEEecCCCch-h-hhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhh
Q 013813 166 ANDPEILLNAARR-VEPYCDYVDINLGCPQR-I-ARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQD 240 (436)
Q Consensus 166 g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~-~-~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d 240 (436)
+.+++++.++|+. ++.||+.|.|+.||+.. . ..+..||+...++++...+++++|++.+ ++++.++..-+++.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 4689999888854 56799999999997542 0 0022456666677888999999999887 5899999888899999
Q ss_pred HHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 241 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 241 ~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++++++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 215 a~~~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 215 TIRFCRKIGELDICFVE-------EP--C-DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp HHHHHHHHGGGCEEEEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred HHHHHHHHHhcCCCEEE-------CC--C-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 99999999999998773 11 1 135899999999999999999999999999999999878999987
No 111
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.72 E-value=3.5e-07 Score=93.15 Aligned_cols=123 Identities=9% Similarity=0.096 Sum_probs=104.5
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++++.++|+. ++.||+.|.|++|+ .+++...+++++|++.+ ++++.+...-+++.++++++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~ 209 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTK 209 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHH
Confidence 89999888854 56799999999886 24567789999999988 58899998888999999999
Q ss_pred HHHHHH--cCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 245 AKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 245 ak~le~--aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++.+++ .|+.+|- +. . .+.||+..+++++.+ ++||++.+.+ +.++++++++...+|.|++.
T Consensus 210 ~~~l~~~g~~i~~iE-------qP--~-~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 210 LVAIREAGHDLLWVE-------DP--I-LRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHHHTTCCCSEEE-------SC--B-CTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhcCCCceEEe-------CC--C-CCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 7776652 21 1 135899999999999 9999999999 99999999999889999997
No 112
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.71 E-value=7.6e-08 Score=92.77 Aligned_cols=161 Identities=17% Similarity=0.204 Sum_probs=102.1
Q ss_pred CCCCEEEEecCCCH--HHHHHHHHHH-cCCCcEEEEecCCCchhhhcCc-----cccccc--CChHHHHHHHHHHhcccC
Q 013813 156 EDRPLFVQFCANDP--EILLNAARRV-EPYCDYVDINLGCPQRIARRGN-----YGAFLM--DNLPLVKSLVEKLALNLN 225 (436)
Q Consensus 156 ~e~plivQL~g~d~--e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~-----~Gs~Ll--~~p~~v~eIv~av~~~~~ 225 (436)
.+..++.-|...++ +.+.+.++.+ +.|+|.|+|+.-|.-+.. .|. .-.++. -+++...++++++++.++
T Consensus 16 ~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~-dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~ 94 (262)
T 1rd5_A 16 GKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYI-DGPIIQASVARALASGTTMDAVLEMLREVTPELS 94 (262)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT-SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCS
T ss_pred CCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccc-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 34567788877777 7788878665 568999999875542111 000 000001 267888899999999889
Q ss_pred ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccC--------------------------ccc---------------
Q 013813 226 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGR--------------------------TRD--------------- 264 (436)
Q Consensus 226 iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgR--------------------------t~~--------------- 264 (436)
+||.+-.+.. .... ...+.+.++|+|++++|.- +..
T Consensus 95 ~Pv~~m~~~~--~~~~-~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 95 CPVVLLSYYK--PIMF-RSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVY 171 (262)
T ss_dssp SCEEEECCSH--HHHS-CCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEE
T ss_pred CCEEEEecCc--HHHH-HHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEE
Confidence 9998853221 0000 0011244555555554321 100
Q ss_pred --ccCCCCC------ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 265 --EKDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 265 --~~~~~~g------~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
...+.+| +...+.++++++.+++||++.|||+|++++.++++. |||+|.+|++++.
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~-GAdgvvVGSai~~ 235 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQW-GADGVIIGSAMVR 235 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHT-TCSEEEECHHHHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHc-CCCEEEEChHHHh
Confidence 0011111 113467889998889999999999999999999885 9999999999764
No 113
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.71 E-value=1.6e-07 Score=95.93 Aligned_cols=124 Identities=11% Similarity=0.109 Sum_probs=106.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++++.++|+. ++.||+.|.|++|- .+++...+++++|++.+ ++++.++..-+++.++++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 89999988865 56799999998651 24788889999999886 58999998889999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++.+++.|+++|. +. . .+.+|+..+++++.+++||++.+.+.++++++++++...||.|++-
T Consensus 227 ~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 227 CRIFEPFNLVWIE-------EP--L-DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp HHHHGGGCCSCEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhCCCEEE-------CC--C-CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 9999999999873 21 1 1358999999999999999999999999999999998889999874
No 114
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.70 E-value=1.6e-07 Score=96.03 Aligned_cols=136 Identities=16% Similarity=0.193 Sum_probs=108.9
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEec------CCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCCh
Q 013813 168 DPEILLNAARR-VEPYCDYVDINL------GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 238 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~------GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~ 238 (436)
+++++.++|+. ++.||+.|.|+. |++... ...|....++++...+++++|++++ ++++.++..-+++.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 89999888864 567999999996 664211 1112222345677889999999877 58999998888999
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++++++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 223 ~~ai~~~~~l~~~~i~~iE-------~P--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 290 (403)
T 2ox4_A 223 VSAIQFAKAIEEFNIFFYE-------EI--N-TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPD 290 (403)
T ss_dssp HHHHHHHHHHGGGCEEEEE-------CC--S-CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHHHHhhCCCEEe-------CC--C-ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999998873 11 1 1357999999999999999999999999999999998789999874
No 115
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.69 E-value=3.1e-07 Score=90.57 Aligned_cols=53 Identities=26% Similarity=0.496 Sum_probs=46.7
Q ss_pred ccCHHHHHHHHhhCCCcEE--EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 272 RADWNAIKAVKNALRIPVL--ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 272 ~ad~~~i~~ik~~~~iPVi--anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
..+++.++++++.+++||+ +.|||.+++|+.++++. |||+|++|++++..+..
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~-GAdgVlVGsai~~a~dp 247 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQL-GMDGVFVGSGIFESENP 247 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHT-TCSCEEESHHHHTSSCH
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHc-CCCEEEEhHHHHcCCCH
Confidence 4578889999998888987 99999999999999986 99999999999975543
No 116
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.68 E-value=5.5e-07 Score=87.24 Aligned_cols=199 Identities=14% Similarity=0.124 Sum_probs=113.8
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecC-CCHHHHHHHHHHHc
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCA-NDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g-~d~e~~~~AA~~v~ 180 (436)
++|++++.--.-+-..+.....+.|++++-..+=.++....+.......++ .-..+++.+..+ .++++....++.+.
T Consensus 12 ~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~--~~~~~~~pn~~~~~~~~~~~~f~~~a~ 89 (264)
T 1xm3_A 12 QSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLD--LSKYTLLPNTAGASTAEEAVRIARLAK 89 (264)
T ss_dssp SCCEEEECSCSSCHHHHHHHHHHHTCSEEEEETTSSTTC-------CTTCC--GGGSEEEEECTTCSSHHHHHHHHHHHH
T ss_pred cCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHH--hcCCeEcCCccccCCHHHHHHHHHHHH
Confidence 678888854443433555555667999863222001100001111111111 123566678877 77887665555553
Q ss_pred -C-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEE
Q 013813 181 -P-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLL 256 (436)
Q Consensus 181 -~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I 256 (436)
. +.+.|.++.-. +. ..+. +...++++.+++.+ ++.+..- ...+. +.++.+.+.|+++|
T Consensus 90 ~agg~~~i~l~i~~-------d~--~~~~---~e~~~~~~~a~~~~~~g~~vi~~--~~~~~----~~a~~~~~~gad~v 151 (264)
T 1xm3_A 90 ASGLCDMIKVEVIG-------CS--RSLL---PDPVETLKASEQLLEEGFIVLPY--TSDDV----VLARKLEELGVHAI 151 (264)
T ss_dssp HTTCCSSEEECCBC-------CT--TTCC---BCHHHHHHHHHHHHHTTCCEEEE--ECSCH----HHHHHHHHHTCSCB
T ss_pred HcCCCCeEEEeecC-------CC--cccc---cchHHHHHHHHHHHCCCeEEEEE--cCCCH----HHHHHHHHhCCCEE
Confidence 3 46777777511 00 0011 22345555554432 3333321 11222 34777888999998
Q ss_pred EeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 257 AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 257 ~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
...+...... .+..+++.++.+++..++||++.|||.+++|+.++++. |||+|.||++++..+.
T Consensus 152 ~~~~~~~Gt~---~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~-GAdgViVGSAi~~a~d 215 (264)
T 1xm3_A 152 MPGASPIGSG---QGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMEL-GADGVLLNTAVSGADD 215 (264)
T ss_dssp EECSSSTTCC---CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHT-TCSEEEESHHHHTSSS
T ss_pred EECCcccCCC---CCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHc-CCCEEEEcHHHhCCCC
Confidence 3323221111 11235788999999889999999999999999999986 9999999999886554
No 117
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.67 E-value=2.5e-07 Score=94.50 Aligned_cols=135 Identities=15% Similarity=0.235 Sum_probs=110.8
Q ss_pred CCEEEEecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+...+...+++++.++|+. ++.||+.|.|+.|+ +++...+++++|++.+ ++++.++..-
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 344444544689999888864 46699999999763 4577788889998886 5899999888
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++++++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE-------qP--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 268 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIE-------QP--L-PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLM 268 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEE-------CC--S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEE-------CC--C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 99999999999999999999873 21 1 13589999999999999999999999999999999988899999
Q ss_pred eehH
Q 013813 315 SAES 318 (436)
Q Consensus 315 IGRg 318 (436)
+--.
T Consensus 269 ik~~ 272 (397)
T 2qde_A 269 IKTQ 272 (397)
T ss_dssp ECHH
T ss_pred Eecc
Confidence 8533
No 118
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.66 E-value=4e-07 Score=93.74 Aligned_cols=146 Identities=10% Similarity=0.051 Sum_probs=117.0
Q ss_pred CCCCEEEE-ecCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEE
Q 013813 156 EDRPLFVQ-FCANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 231 (436)
Q Consensus 156 ~e~plivQ-L~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVK 231 (436)
...|+... +...+++++++.|+. ++.||+.|.|++|+.-. + |+ ++++...+++++|++.+ ++++.|.
T Consensus 166 ~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vD 236 (412)
T 3stp_A 166 DRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLE 236 (412)
T ss_dssp SSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 34456555 355789999988865 56799999999988521 1 21 35677788899999887 5899999
Q ss_pred eccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 232 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 232 iRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
...+++.++++++++.+++.|+++|- +... +.|++..+++++.+++||++.+.+.+.++++++++...+|
T Consensus 237 aN~~~~~~~Ai~~~~~Le~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D 306 (412)
T 3stp_A 237 CYMGWNLDYAKRMLPKLAPYEPRWLE-------EPVI---ADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVS 306 (412)
T ss_dssp CTTCSCHHHHHHHHHHHGGGCCSEEE-------CCSC---TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---cccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 99899999999999999999999883 2111 3478999999999999999999999999999999987899
Q ss_pred eeeeehHHh
Q 013813 312 GVLSAESLL 320 (436)
Q Consensus 312 gVmIGRgal 320 (436)
.|++--+-.
T Consensus 307 ~v~ik~~~~ 315 (412)
T 3stp_A 307 VLQYDTNRV 315 (412)
T ss_dssp EECCCHHHH
T ss_pred EEecChhhc
Confidence 998764433
No 119
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.65 E-value=3.6e-07 Score=93.44 Aligned_cols=124 Identities=11% Similarity=0.081 Sum_probs=105.7
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++++.++|+. ++.||+.|.|+.|. .+++...+++++|++.+ ++++.++..-+++.++++++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 89999888854 56799999999763 24677888999998886 58999999889999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 240 ~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 240 GRKMEQFNLIWIE-------EP--L-DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp HHHHGGGTCSCEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHcCCceee-------CC--C-ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999873 11 1 1358999999999999999999999999999999998889999874
No 120
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.65 E-value=3.6e-07 Score=94.67 Aligned_cols=144 Identities=14% Similarity=0.106 Sum_probs=116.0
Q ss_pred CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccc-cccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 167 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGA-FLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs-~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
.+++++++.|+ .++.||..|.+++|||.... .|. ...++++...+++++|++.+ ++++.|+..-+++.++++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~ 220 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAI 220 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHH
Confidence 68999988885 46779999999999997432 222 12235677888999999887 589999988889999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
++++.+++.|+++|. ++. .+.|++..+++++.+++||++.+.+.+.++++++++...+|.|++--+-.+.
T Consensus 221 ~~~~~Le~~~i~~iE------eP~----~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GG 290 (433)
T 3rcy_A 221 RLGQAIEPYSPLWYE------EPV----PPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGG 290 (433)
T ss_dssp HHHHHHGGGCCSEEE------CCS----CTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTH
T ss_pred HHHHHhhhcCCCEEE------CCC----ChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCC
Confidence 999999999999884 111 1347899999999999999999999999999999998889999877555444
Q ss_pred Cc
Q 013813 323 PA 324 (436)
Q Consensus 323 P~ 324 (436)
..
T Consensus 291 it 292 (433)
T 3rcy_A 291 IW 292 (433)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 121
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.63 E-value=3.9e-07 Score=93.42 Aligned_cols=134 Identities=18% Similarity=0.232 Sum_probs=110.0
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEec----CCCchhhhcCccccccc--CChHHHHHHHHHHhccc--CccEEEEeccCCCh
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINL----GCPQRIARRGNYGAFLM--DNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 238 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~----GCP~~~~~~~~~Gs~Ll--~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~ 238 (436)
++++++++|+ .++.||+.|.++. |+.... ||+.+. ++++...+++++|++++ ++++.+...-+++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 7888888885 4577999999998 653221 555554 46788889999999887 58899998888999
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++++++.+++.|+++|- ++. .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 224 ~~a~~~~~~l~~~~i~~iE------eP~----~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLE------EPT----PPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEE------CCS----CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred HHHHHHHHHHhhcCCCeEE------CCC----ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999874 111 1357999999999999999999999999999999998789999873
No 122
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.63 E-value=3.5e-07 Score=93.00 Aligned_cols=134 Identities=10% Similarity=0.149 Sum_probs=108.8
Q ss_pred CCEEEEecC--CCH---HHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEE
Q 013813 158 RPLFVQFCA--NDP---EILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVS 229 (436)
Q Consensus 158 ~plivQL~g--~d~---e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVs 229 (436)
.|+...+++ .++ +.++++|+. ++.||+.|.|+.|+ .+++...++++++++.+ ++++.
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~ 188 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMI 188 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEE
Confidence 344444422 578 888888754 56799999999876 24677888899998877 58999
Q ss_pred EEeccCCChhhHHHHHHHHHHc-CccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc
Q 013813 230 CKIRVFPNLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 308 (436)
Q Consensus 230 VKiRlg~~~~d~~~~ak~le~a-G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t 308 (436)
++..-+++.++++++++.+++. |+++|- +.. .+.||+..+++++.+++||++.+.+.+.++++++++..
T Consensus 189 vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 258 (382)
T 2gdq_A 189 LDANQSYDAAAAFKWERYFSEWTNIGWLE-------EPL---PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQR 258 (382)
T ss_dssp EECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CCS---CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHHHHhhccCCeEEE-------CCC---CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 9988899999999999999999 988773 211 13579999999999999999999999999999999987
Q ss_pred Ccceeeee
Q 013813 309 GCEGVLSA 316 (436)
Q Consensus 309 GaDgVmIG 316 (436)
.+|.|++-
T Consensus 259 ~~d~v~ik 266 (382)
T 2gdq_A 259 CLDIIQPD 266 (382)
T ss_dssp CCSEECCC
T ss_pred CCCEEecC
Confidence 89999863
No 123
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.61 E-value=4.8e-07 Score=92.19 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=105.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++++.++|+. ++.||+.|.|++|++ +++...++++++++.+ ++++.+...-+++.++++++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 229 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAY 229 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 89999888854 567999999998862 3577788888888876 58899998889999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc----Ccceeeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET----GCEGVLSA 316 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t----GaDgVmIG 316 (436)
++.+++.|+++|- +... +.||+..+++++.+++||++.+.+.+.++++++++.. .+|.|++-
T Consensus 230 ~~~l~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 230 AKMLRDYPLFWYE-------EVGD---PLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp HHHHTTSCCSEEE-------CCSC---TTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred HHHHHHcCCCeec-------CCCC---hhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 9999999999873 2111 3589999999999999999999999999999999986 69999874
No 124
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.60 E-value=4.5e-07 Score=92.77 Aligned_cols=136 Identities=18% Similarity=0.240 Sum_probs=107.6
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEec------CCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCCh
Q 013813 168 DPEILLNAARR-VEPYCDYVDINL------GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 238 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~------GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~ 238 (436)
+++++.++|+. ++.||+.|.|+. |+... ....|....++++...+++++|++.+ ++++.++..-+++.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 89999988864 567999999996 55311 01112111245677889999999877 58899998888999
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++++++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 229 ~~a~~~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYE-------EP--V-MPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEE-------CS--S-CSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHHHHhcCCCEEe-------CC--C-ChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999873 11 1 1357999999999999999999999999999999998789998763
No 125
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.59 E-value=4.3e-07 Score=88.84 Aligned_cols=133 Identities=18% Similarity=0.187 Sum_probs=92.0
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--C-CChhhHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQDTIKYAKML 248 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--g-~~~~d~~~~ak~l 248 (436)
..++...++.|+|.||+-+ ++|..+-.+.+.+.+-+++|++.++-+ .+|+=+ + .+.++....++.+
T Consensus 129 v~Ea~~Ai~~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia 197 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLS 197 (288)
T ss_dssp HHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHH
Confidence 3455567788999999543 156666678899999999998888655 366533 1 3456677788889
Q ss_pred HHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhh--CCCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHh
Q 013813 249 EDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 320 (436)
Q Consensus 249 e~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~--~~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal 320 (436)
.++|+|+|--. |-.. ++.-..|..+++++.+. .+++|.+.|||+|.+|+.++++. ||+ |+..|+.++
T Consensus 198 ~eaGADfVKTSTGf~~----~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~a-GA~RiGtS~g~~I~ 269 (288)
T 3oa3_A 198 SLAGADYVKTSTGFNG----PGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRA-GAERLGASAGVKIV 269 (288)
T ss_dssp HHTTCSEEECCCSSSS----CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHT-TCSEEEESCHHHHH
T ss_pred HHcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHc-CCceeehhhHHHHH
Confidence 99999999443 2211 11001244555555442 46999999999999999999996 999 666665554
No 126
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.59 E-value=6.9e-08 Score=90.99 Aligned_cols=89 Identities=27% Similarity=0.385 Sum_probs=75.4
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
+++.++++.++++|+++|+++...... .....+++.++++++.+++||+++|+|.++++++++++. |||+|++|+.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~---~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~-Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP---EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRA-GADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT---TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH-TCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc---cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc-CCCEEEEChH
Confidence 467889999999999999998765432 111346788999999999999999999999999998885 9999999999
Q ss_pred HhhCCccchhhhh
Q 013813 319 LLENPALFAGFRT 331 (436)
Q Consensus 319 al~nP~lf~~i~~ 331 (436)
++.+|+++.++..
T Consensus 109 ~~~~~~~~~~~~~ 121 (253)
T 1h5y_A 109 AVRNPQLVALLAR 121 (253)
T ss_dssp HHHCTHHHHHHHH
T ss_pred HhhCcHHHHHHHH
Confidence 9999998877643
No 127
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.58 E-value=6.5e-07 Score=91.92 Aligned_cols=145 Identities=11% Similarity=0.062 Sum_probs=117.0
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
...|+...+.+.+++++++.++ .++.||..|.| .|+|.... .....+++...+++++|++.+ ++++.|..
T Consensus 113 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 113 DKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp SCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred CceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 3467777888889999998886 45779999999 88874210 111234566778899999987 58999998
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.-+++.++++++++.+++.|+++|. +.. .+.|++..+++++.+++||++.+.+.+.++++++++...+|.
T Consensus 186 N~~~~~~~A~~~~~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~ 255 (405)
T 3rr1_A 186 HGRVSAPMAKVLIKELEPYRPLFIE-------EPV---LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSI 255 (405)
T ss_dssp CSCBCHHHHHHHHHHHGGGCCSCEE-------CSS---CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCe
Confidence 8899999999999999999999883 111 134789999999999999999999999999999999888999
Q ss_pred eeeeh
Q 013813 313 VLSAE 317 (436)
Q Consensus 313 VmIGR 317 (436)
|++--
T Consensus 256 v~~d~ 260 (405)
T 3rr1_A 256 LQPDL 260 (405)
T ss_dssp ECCBT
T ss_pred EEECh
Confidence 98753
No 128
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.57 E-value=1.2e-06 Score=89.05 Aligned_cols=136 Identities=13% Similarity=0.192 Sum_probs=113.0
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.|+...+...+++++.+.++ .++. |+..|.+.+|++ +++.-.+++++|++.+ ++++.|+..
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 45556677788988887664 5676 999999998762 4566678899999987 489999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.+++.++++.+++.|+++|. ++ . .+.|++..+++++.+++||.+.+.+.+.++++++++...+|.|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE------qP---~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 272 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFE------QP---T-PADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVI 272 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEE------SC---S-CTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE------CC---C-ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999999884 11 1 1357899999999999999999999999999999998789999
Q ss_pred eeehH
Q 013813 314 LSAES 318 (436)
Q Consensus 314 mIGRg 318 (436)
++--+
T Consensus 273 ~~k~~ 277 (383)
T 3i4k_A 273 ALKTT 277 (383)
T ss_dssp EECTT
T ss_pred EEccc
Confidence 87643
No 129
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.57 E-value=4.2e-07 Score=92.25 Aligned_cols=125 Identities=11% Similarity=0.100 Sum_probs=105.8
Q ss_pred HHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCC-hhhHHHH
Q 013813 169 PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPN-LQDTIKY 244 (436)
Q Consensus 169 ~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~-~~d~~~~ 244 (436)
++++++.++ .++.||+.|.|++||+ | .+++...+++++|++.+ ++++.|....+++ .++++++
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~ 213 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMM 213 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHH
Confidence 388887775 4567999999999985 2 24788888999999886 6899999988999 9999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++.+++.|+++|. +. . .+.|++..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 214 ~~~l~~~~i~~iE-------qP--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 275 (374)
T 3sjn_A 214 AKRLEEFNLNWIE-------EP--V-LADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPD 275 (374)
T ss_dssp HHHSGGGCCSEEE-------CS--S-CTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCB
T ss_pred HHHhhhcCceEEE-------CC--C-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999883 21 1 1347899999999999999999999999999999998889999864
No 130
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.56 E-value=4.1e-07 Score=86.91 Aligned_cols=131 Identities=19% Similarity=0.245 Sum_probs=94.2
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--C-CChhhHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQDTIKYAKML 248 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--g-~~~~d~~~~ak~l 248 (436)
..++...++.|+|.||+.+ ++|..+..+.+.+.+-++++++.++- ..+|+=+ + .+.++....++.+
T Consensus 98 v~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia 166 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRC 166 (239)
T ss_dssp HHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHH
Confidence 3355567788999999874 25655667888888888888877741 2445312 2 3556777788888
Q ss_pred HHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHhh
Q 013813 249 EDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLLE 321 (436)
Q Consensus 249 e~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal~ 321 (436)
.++|+|+|-.. |-. .+.+..+.++.+++.+ +++|.++|||+|.+|+.++++. ||+ |+..|+.++.
T Consensus 167 ~~aGADfVKTSTGf~-------~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~a-GA~riGtS~~~~I~~ 236 (239)
T 3ngj_A 167 VAAGAEYVKTSTGFG-------THGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINN-GASRIGASAGIAILN 236 (239)
T ss_dssp HHHTCSEEECCCSSS-------SCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHT-TEEEEEESCHHHHHH
T ss_pred HHHCcCEEECCCCCC-------CCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHh-cccceecccHHHHHh
Confidence 99999999543 321 2346677777777765 6899999999999999999987 999 5555555543
No 131
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.56 E-value=7.9e-08 Score=91.04 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
+..++++.++++|+++|+++..+.... ..... +.++++++.+++||+++|||.++++++.+++. |||+|++|+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~-Gad~V~lg~~~ 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG---RGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALAT-GCARVNVGTAA 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT---SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc---CCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHc-CCCEEEECchH
Confidence 778899999999999999986554321 11344 88999999999999999999999999999985 99999999999
Q ss_pred hhCCccchhhhh
Q 013813 320 LENPALFAGFRT 331 (436)
Q Consensus 320 l~nP~lf~~i~~ 331 (436)
+.+|+++.++..
T Consensus 107 l~~p~~~~~~~~ 118 (244)
T 2y88_A 107 LENPQWCARVIG 118 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhChHHHHHHHH
Confidence 999998877653
No 132
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.55 E-value=6e-07 Score=91.93 Aligned_cols=158 Identities=8% Similarity=0.079 Sum_probs=120.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhh-----c-Cccccccc--CChHHHHHHHHHHhccc--
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR-----R-GNYGAFLM--DNLPLVKSLVEKLALNL-- 224 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~-----~-~~~Gs~Ll--~~p~~v~eIv~av~~~~-- 224 (436)
+..|+...+.+.+++++++.++ .++.||..|-|.+|++..... + ..-|..+. +.++...+++++|++.+
T Consensus 121 ~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 121 DAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC
Confidence 3456666778889999998885 557799999999998531100 0 01122221 12466778889999887
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHH
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~ 304 (436)
++++.|+...+++.++++++++.+++.|+++|. +... +.|++..+++++.+++||++.+.+.+.++++++
T Consensus 201 d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP~~---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 270 (401)
T 3sbf_A 201 QFHILHDVHERLFPNQAIQFAKEVEQYKPYFIE-------DILP---PNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSL 270 (401)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE-------CSSC---TTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---hhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHH
Confidence 689999999899999999999999999998884 1111 347888899999999999999999999999999
Q ss_pred HHhcCcceeeeehHHhhCC
Q 013813 305 LEETGCEGVLSAESLLENP 323 (436)
Q Consensus 305 l~~tGaDgVmIGRgal~nP 323 (436)
++...+|.|++--+-.+..
T Consensus 271 i~~~~~d~v~~k~~~~GGi 289 (401)
T 3sbf_A 271 IANRRIDFIRCHVSQIGGI 289 (401)
T ss_dssp HHTTCCSEECCCGGGGTSH
T ss_pred HhcCCCCEEecCccccCCH
Confidence 9988899998765444433
No 133
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.54 E-value=3.6e-07 Score=94.13 Aligned_cols=152 Identities=14% Similarity=0.072 Sum_probs=116.6
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCc-----------------ccccccCChHHHHHHH
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGN-----------------YGAFLMDNLPLVKSLV 217 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~-----------------~Gs~Ll~~p~~v~eIv 217 (436)
+..|+...+.+.+++++++.++ .++.||..|-+.+|+|......+. .+-...++++...+++
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v 210 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLF 210 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 3456666677889999998885 457799999999999752111000 0001112356678889
Q ss_pred HHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCC
Q 013813 218 EKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV 295 (436)
Q Consensus 218 ~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI 295 (436)
++|++.+ ++++.|....+++.++++++++.+++.|+++|. +.. .+.|++..+++++.+++||++.+.+
T Consensus 211 ~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~ 280 (418)
T 3r4e_A 211 EELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DCT---PAENQEAFRLVRQHTVTPLAVGEIF 280 (418)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SCS---CCSSGGGGHHHHHHCCSCEEECTTC
T ss_pred HHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CccCHHHHHHHHhcCCCCEEEcCCc
Confidence 9999887 689999998899999999999999999999884 111 1347788899999999999999999
Q ss_pred CCHHHHHHHHHhcCcceeeeeh
Q 013813 296 RHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 296 ~s~eda~~~l~~tGaDgVmIGR 317 (436)
.+.++++++++...+|.|++--
T Consensus 281 ~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 281 NTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp CSGGGTHHHHHTTCCSEECCCT
T ss_pred CCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999987899998753
No 134
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.54 E-value=2.3e-06 Score=85.62 Aligned_cols=132 Identities=18% Similarity=0.150 Sum_probs=107.0
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
.|+-..+.+.+++++.+.|+ .++.||+.|.|+.|+ +++...+++++|++.- ++++.+...-+
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 34445566778999988885 457799999999875 3566677788888762 47788887778
Q ss_pred CChhhHHHHHHHHHHcCcc--EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 236 PNLQDTIKYAKMLEDAGCS--LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d--~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++++++.+++.|++ +|- +. . .+.||+..+++++.+++||.+.+.+.+.++++++++...+|.|
T Consensus 193 ~~~~~a~~~~~~l~~~~i~~~~iE-------~P--~-~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 193 YTQKEAVEFARAVYQKGIDIAVYE-------QP--V-RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEE-------CC--S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHhcCCCeeeee-------CC--C-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 8999999999999999998 763 21 1 1357999999999999999999999999999999998789999
Q ss_pred ee
Q 013813 314 LS 315 (436)
Q Consensus 314 mI 315 (436)
++
T Consensus 263 ~i 264 (345)
T 2zad_A 263 NI 264 (345)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 135
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.54 E-value=8.5e-07 Score=85.61 Aligned_cols=133 Identities=19% Similarity=0.209 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccC-CChhhHHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF-PNLQDTIKYAKMLE 249 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg-~~~~d~~~~ak~le 249 (436)
..++...++.|+|.||+-+ ++|+.+..+.+.+.+-+.++++.++ .|+-|=+-.+ .+.++....++.+.
T Consensus 114 v~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~ 183 (260)
T 3r12_A 114 AHEAIFAVESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISK 183 (260)
T ss_dssp HHHHHHHHHHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 3344466788999999864 3676667788999988888888774 4443333222 35567778888899
Q ss_pred HcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHhh
Q 013813 250 DAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLLE 321 (436)
Q Consensus 250 ~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal~ 321 (436)
++|+|+|--. .++ .++.+..+.++.+++.+ +++|-++|||+|.+|+.++++. ||+ |+..|+.++.
T Consensus 184 eaGADfVKTS----TGf--~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~a-GA~RiGtS~g~~I~~ 252 (260)
T 3r12_A 184 LAGAHFVKTS----TGF--GTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMY-GADRIGTSSGVKIVQ 252 (260)
T ss_dssp HTTCSEEECC----CSS--SSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEESCHHHHHH
T ss_pred HhCcCEEEcC----CCC--CCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHc-CCceeecchHHHHHH
Confidence 9999999443 111 12246677777777765 6999999999999999999997 999 6666666554
No 136
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.53 E-value=9.2e-08 Score=90.80 Aligned_cols=87 Identities=21% Similarity=0.245 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
+..++++.++++|+++|+|+..+.... + ...+ +.++++++.+++||+++|||.++++++.+++. |||+|.+|+.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~--~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~-Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG-T--GDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALAT-GCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT-S--CCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc-C--CChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHc-CCCEEEECchH
Confidence 778899999999999999987554321 1 1345 88999999999999999999999999999986 99999999999
Q ss_pred hhCCccchhhhh
Q 013813 320 LENPALFAGFRT 331 (436)
Q Consensus 320 l~nP~lf~~i~~ 331 (436)
+.||+++.++..
T Consensus 108 l~~p~~~~~~~~ 119 (244)
T 1vzw_A 108 LETPEWVAKVIA 119 (244)
T ss_dssp HHCHHHHHHHHH
T ss_pred hhCHHHHHHHHH
Confidence 999998877643
No 137
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.53 E-value=5.5e-07 Score=107.71 Aligned_cols=204 Identities=13% Similarity=0.124 Sum_probs=133.1
Q ss_pred HHHHhCCCcEEEccCC-CCCcHHHHHHHHHhCCCeEEeC--cccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHH
Q 013813 96 HWTKLGRPKLIVAPMV-DNSELPFRMLCRRYGAEAAYTP--MLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEIL 172 (436)
Q Consensus 96 ~~~~lg~~~i~lAPM~-gvtd~~fR~l~~~~Ga~l~~Te--misa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~ 172 (436)
+-+.+|..||++|||. ..++..|-..+.+.|.-...+- ..+...+.......+. + .+.++|+.|+++-.++..+
T Consensus 583 ~t~llg~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~-~--t~~~~~~gvN~~~~~~~~~ 659 (2051)
T 2uv8_G 583 FSKLIGRPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVS-Q--IEKGSTFGINLIYVNPFML 659 (2051)
T ss_dssp HHHHHSSCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHH-H--SCTTCCEEEEEETTCTTHH
T ss_pred HHHhhCccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHH-h--cCCCCceEEEEeecChhhh
Confidence 5566888999999999 5559988777878876444322 2333333222111111 1 2457899999887766422
Q ss_pred ---HHHHH-HHcCCC--cEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 173 ---LNAAR-RVEPYC--DYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 173 ---~~AA~-~v~~g~--D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
.+.++ ++++|+ |+|.+..|-|. ++.+.++++.+ ++++.... . .....+..+.
T Consensus 660 ~~~~~~~~~~~~~gv~i~~v~~~ag~p~---------------~~~~~~~i~~l----G~~vi~~~-~--~~~~a~~~~~ 717 (2051)
T 2uv8_G 660 QWGIPLIKELRSKGYPIQFLTIGAGVPS---------------LEVASEYIETL----GLKYLGLK-P--GSIDAISQVI 717 (2051)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEESSCCC---------------HHHHHHHHHHS----CCSCEEEC-C--CSHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCcceEEecCCCCc---------------hhhHHHHHHHc----CCEEEEec-C--chHHHHHHHH
Confidence 13333 346775 55888877765 23344455554 77766531 1 2356666778
Q ss_pred HHHHcCccEE---EeccCcccccCCCC--CccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHH----------hcCcc
Q 013813 247 MLEDAGCSLL---AVHGRTRDEKDGKK--FRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE----------ETGCE 311 (436)
Q Consensus 247 ~le~aG~d~I---~VHgRt~~~~~~~~--g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~----------~tGaD 311 (436)
..+++|+|++ .+.|..+.+-.+.. ...-+.++.+|++.++||||+.|||.+.+++..+|. .-|||
T Consensus 718 ~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgad 797 (2051)
T 2uv8_G 718 NIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFD 797 (2051)
T ss_dssp HHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCS
T ss_pred HHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCCCc
Confidence 8899999994 44555544321110 011234578899999999999999999999999993 24999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
||++|+.++.-.+
T Consensus 798 Gv~~GTrf~~t~E 810 (2051)
T 2uv8_G 798 GFLFGSRVMIAKE 810 (2051)
T ss_dssp CEECSGGGTTSTT
T ss_pred eeeechHHHhCcc
Confidence 9999999987666
No 138
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.52 E-value=4.4e-07 Score=91.44 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=112.7
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+..++...+++.+.+.++ .++.|+..|.+++|| +++.-.+.++++++.+ ++++.|+.+.
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 193 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPNQ 193 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECTT
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45567788889999988775 567799999999886 3556677788888876 6899999999
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc-Cccee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET-GCEGV 313 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t-GaDgV 313 (436)
+|+.+++.++++.+++.|+.+|- +. . .+.||+..+++++.+++||.+.+.+.+.+++.++++.. .+|.|
T Consensus 194 ~~~~~~a~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v 263 (356)
T 3ro6_B 194 SYDRDGLLRLDRLVQELGIEFIE-------QP--F-PAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIF 263 (356)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCEE-------CC--S-CTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------CC--C-CCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEE
Confidence 99999999999999999999883 21 1 13478989999888899999999999999999999987 79999
Q ss_pred eeehHH
Q 013813 314 LSAESL 319 (436)
Q Consensus 314 mIGRga 319 (436)
++--+-
T Consensus 264 ~~k~~~ 269 (356)
T 3ro6_B 264 NIKLMK 269 (356)
T ss_dssp EECHHH
T ss_pred EEcccc
Confidence 986543
No 139
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.51 E-value=7.6e-07 Score=82.70 Aligned_cols=149 Identities=24% Similarity=0.256 Sum_probs=95.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchh--hh--cCccccccc------CChHHHHHHHHHH----
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRI--AR--RGNYGAFLM------DNLPLVKSLVEKL---- 220 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~--~~--~~~~Gs~Ll------~~p~~v~eIv~av---- 220 (436)
.+.|++..|.+.+++++.+.++.+. .|++.|++...+|... .+ +..++..++ .+++.+...++.=
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V 84 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLI 84 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEE
Confidence 4689999999999999999997664 5899999998776521 11 111222111 2334333222210
Q ss_pred ------------hcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--
Q 013813 221 ------------ALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-- 286 (436)
Q Consensus 221 ------------~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-- 286 (436)
++..+.++.+.+ .+..+ +..+.+.|+|+|.++.. ....++.++++++..+
T Consensus 85 ~~~~~~~~~~~~~~~~g~~~~~g~------~t~~e-~~~a~~~G~d~v~v~~t---------~~~g~~~~~~l~~~~~~~ 148 (212)
T 2v82_A 85 VTPNIHSEVIRRAVGYGMTVCPGC------ATATE-AFTALEAGAQALKIFPS---------SAFGPQYIKALKAVLPSD 148 (212)
T ss_dssp ECSSCCHHHHHHHHHTTCEEECEE------CSHHH-HHHHHHTTCSEEEETTH---------HHHCHHHHHHHHTTSCTT
T ss_pred EeCCCCHHHHHHHHHcCCCEEeec------CCHHH-HHHHHHCCCCEEEEecC---------CCCCHHHHHHHHHhccCC
Confidence 001122222111 11122 23445678888876431 0235788999988875
Q ss_pred CcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 287 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 287 iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
+||++.|||+ .+++.++++. |+|+|.+|++++..
T Consensus 149 ipvia~GGI~-~~~i~~~~~~-Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 149 IAVFAVGGVT-PENLAQWIDA-GCAGAGLGSDLYRA 182 (212)
T ss_dssp CEEEEESSCC-TTTHHHHHHH-TCSEEEECTTTCCT
T ss_pred CeEEEeCCCC-HHHHHHHHHc-CCCEEEEChHHhCC
Confidence 9999999997 8999999985 99999999998765
No 140
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.50 E-value=2.6e-06 Score=98.60 Aligned_cols=113 Identities=15% Similarity=0.062 Sum_probs=82.4
Q ss_pred CChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccC------CCCCccCHHHHHH
Q 013813 208 DNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD------GKKFRADWNAIKA 280 (436)
Q Consensus 208 ~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~------~~~g~ad~~~i~~ 280 (436)
.+++.+.++++.+++.. ++||.||+=... .....|+.+.++|+|+|+|.|....... ...|.+-...+.+
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~e 1086 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEI---GIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTE 1086 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECST---THHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCC---ChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHH
Confidence 34567889999999888 899999965432 3334678899999999999665422100 0011222345566
Q ss_pred HHhhC-------CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 281 VKNAL-------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 281 ik~~~-------~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
+.+.+ ++|||+.|||.+..|+.+++.. |||+|++||++|....
T Consensus 1087 v~~al~~~glr~~IpVIAdGGIrtG~DVakALaL-GAdaV~iGTafL~alg 1136 (1520)
T 1ofd_A 1087 VHRVLMENQLRDRVLLRADGGLKTGWDVVMAALM-GAEEYGFGSIAMIAEG 1136 (1520)
T ss_dssp HHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHT-TCSEEECSHHHHHHTT
T ss_pred HHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHc-CCCeeEEcHHHHHHHH
Confidence 65543 6999999999999999999997 9999999999987543
No 141
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.50 E-value=1.8e-06 Score=86.89 Aligned_cols=137 Identities=13% Similarity=0.152 Sum_probs=111.2
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC
Q 013813 159 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg 235 (436)
|+...+...+++++++.++ .++.|+..|.+++|++ ++.-.+++++|++.+ ++++.|+..-+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 3345667789999887775 5677999999998864 244567788888876 58899998889
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.+++.++++.+++.|+++|. ++ . .+.||+..+++++.+++||.+.+.+.+.+++.++++...+|.|++
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE------qP---~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE------QP---V-KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE------CC---S-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE------CC---C-ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 9999999999999999998884 11 1 134789999999999999999999999999999999888999998
Q ss_pred ehHHhh
Q 013813 316 AESLLE 321 (436)
Q Consensus 316 GRgal~ 321 (436)
--+-.+
T Consensus 264 k~~~~G 269 (354)
T 3jva_A 264 KLMKCG 269 (354)
T ss_dssp CHHHHT
T ss_pred CchhcC
Confidence 754443
No 142
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.49 E-value=1.3e-06 Score=83.19 Aligned_cols=133 Identities=19% Similarity=0.255 Sum_probs=96.5
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--C-C----ChhhHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F-P----NLQDTIKY 244 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--g-~----~~~d~~~~ 244 (436)
..++...++.|+|.||+.+ ++|..+-.+.+.+.+-+.++++.++ ...+|+=+ + . +.++....
T Consensus 83 ~~E~~~Ai~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a 151 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADV 151 (231)
T ss_dssp HHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHH
Confidence 3355567788999999875 3677777789999999999988884 22345423 1 2 45667778
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHh
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLL 320 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal 320 (436)
++.+.++|+|+|--. .++. ..+.+..+.++.+++.+ +++|-++|||+|.+|+.++++. ||+ |+..|+.++
T Consensus 152 ~~ia~~aGADfVKTS----TGf~-~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~a-Ga~RiGtS~g~~I~ 225 (231)
T 3ndo_A 152 CRVARDAGADFVKTS----TGFH-PSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDA-GATRLGLSGSRAVL 225 (231)
T ss_dssp HHHHHHTTCSEEECC----CSCC-TTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHT-TCSEEEESSHHHHH
T ss_pred HHHHHHHCcCEEEcC----CCCC-CCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHh-cchhcccchHHHHH
Confidence 888999999999432 1110 02346677777777765 6999999999999999999987 999 776666655
Q ss_pred h
Q 013813 321 E 321 (436)
Q Consensus 321 ~ 321 (436)
.
T Consensus 226 ~ 226 (231)
T 3ndo_A 226 D 226 (231)
T ss_dssp H
T ss_pred h
Confidence 3
No 143
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.49 E-value=9.2e-07 Score=90.69 Aligned_cols=137 Identities=13% Similarity=0.080 Sum_probs=110.0
Q ss_pred CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCccccc-ccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 167 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF-LMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~-Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
.+++++++.|+ .++.||..|.++.|+|.. +..|.. ...+++...+++++|++.+ ++++.|+..-+++.++++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHH
Confidence 57899988775 456799999999998753 111221 1223667778899999887 589999988899999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
++++.+++.|+++|. +... +.|++..+++++.+++||++.+.+.+.++++++++...+|.|++--
T Consensus 226 ~~~~~l~~~~i~~iE-------eP~~---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 226 RLARRLEAYDPLWFE-------EPIP---PEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHHGGGCCSEEE-------CCSC---TTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHHhhcCCcEEE-------CCCC---cccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 999999999999884 1111 3478999999999999999999999999999999987899998653
No 144
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.48 E-value=3.9e-06 Score=81.73 Aligned_cols=142 Identities=17% Similarity=0.224 Sum_probs=102.8
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
-+.|++..=+.-++.++.+|. +.|+|+|=|... .+ +++.+.++++..++ .++.+.+-+.
T Consensus 112 v~lPvl~kdfiid~~qv~~A~---~~GAD~VlLi~a--------------~l-~~~~l~~l~~~a~~-lGl~~lvev~-- 170 (272)
T 3qja_A 112 VSIPVLRKDFVVQPYQIHEAR---AHGADMLLLIVA--------------AL-EQSVLVSMLDRTES-LGMTALVEVH-- 170 (272)
T ss_dssp CSSCEEEESCCCSHHHHHHHH---HTTCSEEEEEGG--------------GS-CHHHHHHHHHHHHH-TTCEEEEEES--
T ss_pred CCCCEEECccccCHHHHHHHH---HcCCCEEEEecc--------------cC-CHHHHHHHHHHHHH-CCCcEEEEcC--
Confidence 357888776777776655543 479999988632 11 24567777777654 5777766542
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
+.++ ++.+.+.|++.|-+.+|.... . ..+++.+.++++.+ ++||++.|||.|++|+.++++. |+|||
T Consensus 171 -t~ee----~~~A~~~Gad~IGv~~r~l~~---~--~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~-Gadgv 239 (272)
T 3qja_A 171 -TEQE----ADRALKAGAKVIGVNARDLMT---L--DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGA-GADAV 239 (272)
T ss_dssp -SHHH----HHHHHHHTCSEEEEESBCTTT---C--CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHT-TCSEE
T ss_pred -CHHH----HHHHHHCCCCEEEECCCcccc---c--ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHc-CCCEE
Confidence 2222 344457899999999875432 1 45778888988877 7999999999999999999986 99999
Q ss_pred eeehHHhhCCccchhh
Q 013813 314 LSAESLLENPALFAGF 329 (436)
Q Consensus 314 mIGRgal~nP~lf~~i 329 (436)
.||++++..++.-..+
T Consensus 240 lVGsal~~a~dp~~~~ 255 (272)
T 3qja_A 240 LVGEGLVTSGDPRAAV 255 (272)
T ss_dssp EECHHHHTCSCHHHHH
T ss_pred EEcHHHhCCCCHHHHH
Confidence 9999999877754433
No 145
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.48 E-value=8.1e-07 Score=91.74 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=104.2
Q ss_pred CCH-HHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 167 NDP-EILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 167 ~d~-e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
.++ +.+.++|+. ++.||+.|.|+.|+ +++...+++++|++.+ ++++.++..-+++.++++
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai 246 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADAR 246 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 577 888887754 56699999999875 4677788899998876 588999988889999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++.+++.|+++|- +.. .+.||+..+++++.++ +||++.+.+.+.++++++++...+|.|++-
T Consensus 247 ~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 247 RVLPVLAEIQAGWLE-------EPF---ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp HHHHHHHHTTCSCEE-------CCS---CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred HHHHHHHhcCCCEEE-------CCC---CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 999999999999873 211 1357999999999998 999999999999999999998789988763
No 146
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.47 E-value=2.2e-07 Score=89.24 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.++.++++.++++|++.|.++......... ..+++.++++++.+++||+++|||.+.+++.++++. |||+|++|+.
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~---g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~-Gad~v~lg~~ 105 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLA-GADKALAASV 105 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSS---CCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHH-TCSEEECCCC
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCC---cccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc-CCcHhhhhHH
Confidence 468899999999999999998766543221 357899999999999999999999999999999985 9999999999
Q ss_pred Hh-h--CCccchhhh
Q 013813 319 LL-E--NPALFAGFR 330 (436)
Q Consensus 319 al-~--nP~lf~~i~ 330 (436)
++ . +|+.+.++.
T Consensus 106 ~~~~~~~~~~~~~~~ 120 (266)
T 2w6r_A 106 FHFREIDMRELKEYL 120 (266)
T ss_dssp C------CHHHHHHC
T ss_pred HHhCCCCHHHHHHHH
Confidence 99 5 899888764
No 147
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.47 E-value=7.1e-07 Score=86.95 Aligned_cols=156 Identities=19% Similarity=0.252 Sum_probs=98.4
Q ss_pred CCEEEEecCCC--HHHHHHHHHHHcCCCcEEEEec--CCCch---hhh-----cCcccccccCChHHHHHHHHHHhcccC
Q 013813 158 RPLFVQFCAND--PEILLNAARRVEPYCDYVDINL--GCPQR---IAR-----RGNYGAFLMDNLPLVKSLVEKLALNLN 225 (436)
Q Consensus 158 ~plivQL~g~d--~e~~~~AA~~v~~g~D~IdLN~--GCP~~---~~~-----~~~~Gs~Ll~~p~~v~eIv~av~~~~~ 225 (436)
..++.=|...+ .+...+.++.+++++|.|||.. .-|.- ... .-..| -+.+.+.++++++++.++
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G----~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKG----MSVQGALELVREVRALTE 91 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcCC
Confidence 34555555554 4566667765544499999974 33420 000 00011 255677889999998888
Q ss_pred ccEEEEeccCCC-h--hhHHHHHHHHHHcCccEEEe-----------------ccC---------ccc------------
Q 013813 226 VPVSCKIRVFPN-L--QDTIKYAKMLEDAGCSLLAV-----------------HGR---------TRD------------ 264 (436)
Q Consensus 226 iPVsVKiRlg~~-~--~d~~~~ak~le~aG~d~I~V-----------------HgR---------t~~------------ 264 (436)
+||.+ + ..++ . -....|++.+.++|+|++++ ||- +..
T Consensus 92 ~Pii~-m-~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 92 KPLFL-M-TYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp SCEEE-E-CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred CCEEE-E-ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 99888 2 1111 1 13356778888888887766 111 000
Q ss_pred -----ccCCCCC------ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 265 -----EKDGKKF------RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 265 -----~~~~~~g------~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
...+.+| ....++++++++.+++||++.|||+|++++.++ . |||+|++|+++...
T Consensus 170 fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~-~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 170 FVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA--A-VADGVVVGSALVRA 235 (271)
T ss_dssp CEEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH--T-TSSEEEECHHHHHH
T ss_pred CEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--c-CCCEEEEChHHhcc
Confidence 0001111 123578999999999999999999999999996 4 89999999998754
No 148
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.47 E-value=2e-06 Score=79.55 Aligned_cols=143 Identities=15% Similarity=0.184 Sum_probs=99.1
Q ss_pred CCCCEEEEecCCCHHH-HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 156 EDRPLFVQFCANDPEI-LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 156 ~e~plivQL~g~d~e~-~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
.+.|+.+.+.-.++.. +.+ ..++.|+|+|-++...+ .+.+.++++.+++. ++++.+-+-.
T Consensus 52 ~~~~i~~~~~~~~~~~~~~~--~~~~~Gad~v~v~~~~~----------------~~~~~~~~~~~~~~-g~~~~v~~~~ 112 (211)
T 3f4w_A 52 PHKEVLADAKIMDGGHFESQ--LLFDAGADYVTVLGVTD----------------VLTIQSCIRAAKEA-GKQVVVDMIC 112 (211)
T ss_dssp TTSEEEEEEEECSCHHHHHH--HHHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECTT
T ss_pred CCCEEEEEEEeccchHHHHH--HHHhcCCCEEEEeCCCC----------------hhHHHHHHHHHHHc-CCeEEEEecC
Confidence 4678888777665443 232 33567999999974311 24456666666543 5666553211
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
..+..+.++.+.+.|+|+|.++.....+... ...++.++++++.. ++||++.|||+ .+++.++++. |||+|
T Consensus 113 ---~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~---~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~~-Gad~v 184 (211)
T 3f4w_A 113 ---VDDLPARVRLLEEAGADMLAVHTGTDQQAAG---RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYALL-GPDVV 184 (211)
T ss_dssp ---CSSHHHHHHHHHHHTCCEEEEECCHHHHHTT---CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHTT-CCSEE
T ss_pred ---CCCHHHHHHHHHHcCCCEEEEcCCCcccccC---CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHc-CCCEE
Confidence 1344567788889999999887443222211 23678899999886 89999999996 9999999875 99999
Q ss_pred eeehHHhhCCcc
Q 013813 314 LSAESLLENPAL 325 (436)
Q Consensus 314 mIGRgal~nP~l 325 (436)
.+|++++..++.
T Consensus 185 vvGsai~~~~d~ 196 (211)
T 3f4w_A 185 IVGSAITHAADP 196 (211)
T ss_dssp EECHHHHTCSSH
T ss_pred EECHHHcCCCCH
Confidence 999999886654
No 149
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.45 E-value=6.4e-06 Score=86.58 Aligned_cols=130 Identities=22% Similarity=0.209 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHH
Q 013813 166 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 166 g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ 244 (436)
|-.++.+.++..++++|+|.|-|... + | .-+.+.+.++.+++.. +++|.+. +. -+.+-
T Consensus 277 gv~~d~~eR~~aLv~AGvD~iviD~a--h-----G--------hs~~v~~~i~~ik~~~p~~~viaG-----NV-aT~e~ 335 (556)
T 4af0_A 277 GTRPGDKDRLKLLAEAGLDVVVLDSS--Q-----G--------NSVYQIEFIKWIKQTYPKIDVIAG-----NV-VTREQ 335 (556)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEECCS--C-----C--------CSHHHHHHHHHHHHHCTTSEEEEE-----EE-CSHHH
T ss_pred ccCccHHHHHHHHHhcCCcEEEEecc--c-----c--------ccHHHHHHHHHHHhhCCcceEEec-----cc-cCHHH
Confidence 45678888888899999999888632 1 1 2356788888888776 6788776 21 12345
Q ss_pred HHHHHHcCccEEEecc------CcccccCCCCCccCHHHHHHHH---hhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 245 AKMLEDAGCSLLAVHG------RTRDEKDGKKFRADWNAIKAVK---NALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 245 ak~le~aG~d~I~VHg------Rt~~~~~~~~g~ad~~~i~~ik---~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.|.++|+|.|-|-- -|+.. .+-|.+.+..|.+++ +..++|||+-|||.+.-|+.++|.. |||.||+
T Consensus 336 a~~Li~aGAD~vkVGiGpGSiCtTr~v--~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaa-GAd~VMl 412 (556)
T 4af0_A 336 AAQLIAAGADGLRIGMGSGSICITQEV--MAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALAL-GASAVMM 412 (556)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCCTTT--CCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHcCCCEEeecCCCCcccccccc--cCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhc-CCCEEEE
Confidence 6778889999998731 12221 122344555555554 4468999999999999999999996 9999999
Q ss_pred ehHH
Q 013813 316 AESL 319 (436)
Q Consensus 316 GRga 319 (436)
|.-+
T Consensus 413 Gsll 416 (556)
T 4af0_A 413 GGLL 416 (556)
T ss_dssp STTT
T ss_pred chhh
Confidence 9754
No 150
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.45 E-value=3.5e-06 Score=86.10 Aligned_cols=142 Identities=15% Similarity=0.115 Sum_probs=115.8
Q ss_pred CCCCEEEEec---CCCHHHHHHHH-HH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccE
Q 013813 156 EDRPLFVQFC---ANDPEILLNAA-RR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPV 228 (436)
Q Consensus 156 ~e~plivQL~---g~d~e~~~~AA-~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPV 228 (436)
...|+...+. ..+++++++.+ +. ++.|+..|.|..|++... ...+++.-.+++++|++.+ ++++
T Consensus 124 ~~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l 194 (393)
T 4dwd_A 124 TRLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVI 194 (393)
T ss_dssp SEEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCE
T ss_pred CceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeE
Confidence 3456666653 36789888777 54 566999999999987531 3457888888999999886 6899
Q ss_pred EEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc
Q 013813 229 SCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 308 (436)
Q Consensus 229 sVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t 308 (436)
.|+..-+++.++++++++.+++.|+++|- +... +.|++..+++++.+++||.+.+.+.+.++++++++..
T Consensus 195 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 264 (393)
T 4dwd_A 195 GFDANNGYSVGGAIRVGRALEDLGYSWFE-------EPVQ---HYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG 264 (393)
T ss_dssp EEECTTCCCHHHHHHHHHHHHHTTCSEEE-------CCSC---TTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CCCC---cccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 99999899999999999999999999884 2111 3478999999999999999999999999999999986
Q ss_pred Ccceeeeeh
Q 013813 309 GCEGVLSAE 317 (436)
Q Consensus 309 GaDgVmIGR 317 (436)
+|.|++--
T Consensus 265 -~d~v~~k~ 272 (393)
T 4dwd_A 265 -VRMVQPDI 272 (393)
T ss_dssp -CCEECCCT
T ss_pred -CCEEEeCc
Confidence 99998753
No 151
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.42 E-value=2.1e-06 Score=88.81 Aligned_cols=125 Identities=11% Similarity=0.142 Sum_probs=104.0
Q ss_pred CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
+.+++++.++|+ .++.||+.|.|+.|+ +++...+++++|++.+ ++++.+...-+++.++++
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 259 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAI 259 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHH
Confidence 358999988885 456799999999763 3567778889998877 588999988889999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++.+++.|+++|- +. . .+.||+..+++++.+ ++||++.+.+.+.++++++++...+|.|++-
T Consensus 260 ~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 260 DWMRQLAEFDIAWIE-------EP--T-SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp HHHHTTGGGCCSCEE-------CC--S-CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHHhcCCCeee-------CC--C-CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999873 11 1 135789999999987 6999999999999999999998889999874
No 152
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.42 E-value=8.7e-07 Score=81.75 Aligned_cols=187 Identities=12% Similarity=0.137 Sum_probs=115.3
Q ss_pred HHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcC
Q 013813 121 LCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRG 200 (436)
Q Consensus 121 l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~ 200 (436)
+.+..+.+++++.+-.... +.......++......++.+.+.+.+.+.. .+.++.|++.+=+. |.
T Consensus 20 ~~~~~~~dlvl~D~~~p~~---~g~~~~~~l~~~~~~~~i~vi~~~~~~~~~---~~~~~~Ga~~~l~k---p~------ 84 (237)
T 3cwo_X 20 KYKELKPDIVTMDITMPEM---NGIDAIKEIMKIDPNAKIIVCSAMGQQAMV---IEAIKAGAKDFIVN---TA------ 84 (237)
T ss_dssp HHHHHCCSCEEEECCSTTS---SHHHHHHHHHHHSSSCCEEEECCSSTHHHH---HHHHHTTCCEEEES---HH------
T ss_pred HHHhcCCCEEEEeCCCCCC---CHHHHHHHHHHhCCCCCEEEEECCCCHHHH---HHHHHCCHHheEeC---Cc------
Confidence 3445677877766532210 111111112212334567777777663333 33455677654221 10
Q ss_pred cccccccCChHHHHHHHHHHhcc-cCc---------cEEEEeccCCC--hhhHHHHHHHHHHcCccEEEeccCcccccCC
Q 013813 201 NYGAFLMDNLPLVKSLVEKLALN-LNV---------PVSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG 268 (436)
Q Consensus 201 ~~Gs~Ll~~p~~v~eIv~av~~~-~~i---------PVsVKiRlg~~--~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~ 268 (436)
..+.++++..+.+.+... .-. .+.+....+.. .....++++.+...|+..+.+++....+.
T Consensus 85 -----~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~g~-- 157 (237)
T 3cwo_X 85 -----AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT-- 157 (237)
T ss_dssp -----HHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTC--
T ss_pred -----ccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEecCCCCc--
Confidence 012345555555554322 111 12333333321 13567888899999999898888644332
Q ss_pred CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhhh
Q 013813 269 KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFRT 331 (436)
Q Consensus 269 ~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~~ 331 (436)
++ ..+++.++++++..++|||+.||+.+++++.++++ .|+|+|++|++++.+|+.+.++..
T Consensus 158 ~~-g~~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~-~G~~~~~vg~a~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 158 KS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFL-AGADAALAASVFHFREIDVRELKE 218 (237)
T ss_dssp CS-CCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHH-HTCSEEEESHHHHTTSSCHHHHHH
T ss_pred cc-cccHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHH-cCcHHHhhhHHHHcCCCCHHHHHH
Confidence 22 23489999999999999999999999999999998 599999999999999999987764
No 153
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.41 E-value=4.4e-07 Score=112.02 Aligned_cols=199 Identities=13% Similarity=0.156 Sum_probs=127.8
Q ss_pred HHHHhCCCcEEEccCCC-CCcHHHHHHHHHhCCCeEE--eCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHH
Q 013813 96 HWTKLGRPKLIVAPMVD-NSELPFRMLCRRYGAEAAY--TPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEIL 172 (436)
Q Consensus 96 ~~~~lg~~~i~lAPM~g-vtd~~fR~l~~~~Ga~l~~--Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~ 172 (436)
|.+.+|+.||++|||++ .++..+-..+.+.|.-..+ ..|.+.+.+.......+. ..+.++|+.|+++-.++..+
T Consensus 421 ~~~~lg~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~---~~~~~~p~~vNl~~~~p~~~ 497 (3089)
T 3zen_D 421 FTRLTGRSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELET---LLEPGRAIQFNTLFLDPYLW 497 (3089)
T ss_dssp HHHHHSSCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHH---HSCTTCCCEEEEECSCHHHH
T ss_pred hhhhcCCCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHH---hcCCCCceeechhhcChhhh
Confidence 56678889999999995 5588887777777763333 223333333222111111 12347899999998887542
Q ss_pred H------HHHH-HHcCC--CcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEE-EeccCCChhhHH
Q 013813 173 L------NAAR-RVEPY--CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC-KIRVFPNLQDTI 242 (436)
Q Consensus 173 ~------~AA~-~v~~g--~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsV-KiRlg~~~~d~~ 242 (436)
. +.++ .++.| +|+|-+.+|.|. ++...++++.+++. ++.+.. +. .+.+
T Consensus 498 ~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~---------------~ee~~~~i~~l~~~-Gi~~i~~~~---~t~~--- 555 (3089)
T 3zen_D 498 KLQVGGKRLVQRARQSGAPIDGLVVSAGIPD---------------LEEAVDIIDELNEV-GISHVVFKP---GTVE--- 555 (3089)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCEEEEESSCCC---------------HHHHHHHHTSTTHH-HHCSEEECC---CSHH---
T ss_pred hhccCHHHHHHHHHHcCCCceEEEEeCCCCc---------------hhHhHHHHHHHHHc-CCEEEEEeC---CCHH---
Confidence 1 2233 34667 799999988883 23444555555433 443333 52 1223
Q ss_pred HHHHHHHHcCcc------EEEeccCcccccCCCCCccC-HHHH----HHHHhhCCCcEEEccCCCCHHHHHHHH------
Q 013813 243 KYAKMLEDAGCS------LLAVHGRTRDEKDGKKFRAD-WNAI----KAVKNALRIPVLANGNVRHMEDVQKCL------ 305 (436)
Q Consensus 243 ~~ak~le~aG~d------~I~VHgRt~~~~~~~~g~ad-~~~i----~~ik~~~~iPVianGGI~s~eda~~~l------ 305 (436)
.++.+++.|++ .|++.|.+..+-.+. .+ ..++ .++++.+++||++.|||.+.+++..++
T Consensus 556 -~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~---~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~ 631 (3089)
T 3zen_D 556 -QIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSW---EDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAE 631 (3089)
T ss_dssp -HHHHHHHHHTTSTTSCEEEEECCSSSSEECCS---CCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGG
T ss_pred -HHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCc---ccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhcccccc
Confidence 34445566666 788888776543222 12 2344 677777899999999999999999999
Q ss_pred -----HhcCcceeeeehHHhhCCc
Q 013813 306 -----EETGCEGVLSAESLLENPA 324 (436)
Q Consensus 306 -----~~tGaDgVmIGRgal~nP~ 324 (436)
.. |||||++|+.++.-+.
T Consensus 632 ~~~~p~l-GAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 632 VHGYPLM-PIDGILVGTAAMATLE 654 (3089)
T ss_dssp TTTCCCC-CCSEEECSSTTTTCTT
T ss_pred ccCccCC-CCCEEEecHHHHhCcc
Confidence 54 9999999999988775
No 154
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.40 E-value=3.7e-06 Score=79.45 Aligned_cols=131 Identities=21% Similarity=0.241 Sum_probs=94.7
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc---CCChhhHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV---FPNLQDTIKYAKML 248 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl---g~~~~d~~~~ak~l 248 (436)
..++-..++.|+|+||+.+ ++|.....+.+.+.+-+.++++.++-+ .+|+=+ ..+.++....++.+
T Consensus 74 ~~e~~~Ai~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia 142 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAA 142 (220)
T ss_dssp HHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHH
Confidence 3444466788999999975 256655677888888888888877433 555312 13456777888999
Q ss_pred HHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhh--CCCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHhh
Q 013813 249 EDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLLE 321 (436)
Q Consensus 249 e~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~--~~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal~ 321 (436)
.++|+|+|-.. |-+ ++.+..+.++.+++. .++||.++|||+|.+++.++++. |++ |+..|+.++.
T Consensus 143 ~eaGADfVKTsTGf~-------~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~a-Ga~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 143 IRGGADFLKTSTGFG-------PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKA-GASRLGTSSGVALVA 212 (220)
T ss_dssp HHHTCSEEECCCSSS-------SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHT-TCSEEEETTHHHHHC
T ss_pred HHhCCCEEEeCCCCC-------CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHC-CCcccchhHHHHHHH
Confidence 99999999432 221 134566667777764 47999999999999999999986 999 7777776543
No 155
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.40 E-value=1.4e-06 Score=83.36 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=95.1
Q ss_pred HHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEe------ccCCC--------h
Q 013813 174 NAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI------RVFPN--------L 238 (436)
Q Consensus 174 ~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKi------Rlg~~--------~ 238 (436)
++++ +.+.|+|.|+|... ..-+.+.+.++++++++ .++|+.+=. -.|.+ .
T Consensus 24 ~~~~~l~~~GaD~ielG~S--------------~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp~ 88 (240)
T 1viz_A 24 EQLEILCESGTDAVIIGGS--------------DGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVLN 88 (240)
T ss_dssp HHHHHHHTSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEETT
T ss_pred HHHHHHHHcCCCEEEECCC--------------CCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccCc
Confidence 3344 35669999999861 12346778999999988 788988621 11211 1
Q ss_pred hhHHHH-----HHHHHHcC-----ccEEE----e-ccCcc-------------c--------------cc---CCCCCcc
Q 013813 239 QDTIKY-----AKMLEDAG-----CSLLA----V-HGRTR-------------D--------------EK---DGKKFRA 273 (436)
Q Consensus 239 ~d~~~~-----ak~le~aG-----~d~I~----V-HgRt~-------------~--------------~~---~~~~g~a 273 (436)
++..++ .+.+.+.| .+.|- + .+.+. . .. .......
T Consensus 89 ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G~~~ 168 (240)
T 1viz_A 89 SKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGVLG 168 (240)
T ss_dssp BSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTSCC
T ss_pred ccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCCccC
Confidence 222233 45567777 66654 3 11110 0 00 0101145
Q ss_pred CHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc-cchhhhh
Q 013813 274 DWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA-LFAGFRT 331 (436)
Q Consensus 274 d~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~-lf~~i~~ 331 (436)
+.++++++++.+ ++||++.|||+|+++++++++ |||+|.+|+++..+|. ++++++.
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~--gAd~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE--HADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT--TCSEEEECTHHHHCHHHHHTHHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh--CCCEEEEChHHHhCHHHHHHHHHH
Confidence 789999999999 999999999999999999775 8999999999999999 8887653
No 156
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.40 E-value=2.8e-06 Score=87.40 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=110.9
Q ss_pred CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccc-cCChHHHHHHHHHHhccc--CccEEEEeccCCChhhH
Q 013813 166 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDT 241 (436)
Q Consensus 166 g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~L-l~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~ 241 (436)
..+++++++.++ .++.||..|-|+.|+|.. +..|... ..+++...+++++|++.+ ++++.|...-+++.+++
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A 217 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAGPYT----AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSA 217 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCc----cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHH
Confidence 358999988775 557799999999998753 1112111 123566778889999887 58999998889999999
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
+++++.+++.|+++|. ++. . +.|++..+++++.+++||.+.+.+.+.++++++++...+|.|++--+-
T Consensus 218 ~~~~~~L~~~~i~~iE------eP~-~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~ 285 (412)
T 4e4u_A 218 IRLAKRLEKYDPLWFE------EPV-P---PGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVAR 285 (412)
T ss_dssp HHHHHHHGGGCCSEEE------CCS-C---SSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred HHHHHHhhhcCCcEEE------CCC-C---hhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccc
Confidence 9999999999999884 111 1 347899999999999999999999999999999998789999875433
No 157
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.38 E-value=1.9e-06 Score=88.88 Aligned_cols=157 Identities=10% Similarity=0.068 Sum_probs=117.7
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhh-----hcC-ccccccc--CChHHHHHHHHHHhccc--C
Q 013813 157 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIA-----RRG-NYGAFLM--DNLPLVKSLVEKLALNL--N 225 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~-----~~~-~~Gs~Ll--~~p~~v~eIv~av~~~~--~ 225 (436)
..|+...+.+.+++++++.++ .++.||..|-|.+|++.... .++ .-|..+. +..+...+++++|++++ +
T Consensus 143 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 143 AIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 445656677889999998885 55779999999998742100 000 0111111 11456678889999887 6
Q ss_pred ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 226 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 226 iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
+++.|...-+++.++++++++.+++.|+.+|- +.. .+.+++..+++++.+++||++.+.+.+.+++++++
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll 292 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------DIL---PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLI 292 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CCS---CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------CCC---ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHH
Confidence 89999998899999999999999999999884 111 13467888999999999999999999999999999
Q ss_pred HhcCcceeeeehHHhhCC
Q 013813 306 EETGCEGVLSAESLLENP 323 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP 323 (436)
+...+|.|++--+-.+..
T Consensus 293 ~~ga~d~v~~k~~~~GGi 310 (422)
T 3tji_A 293 VNRRIDFIRCHVSQIGGI 310 (422)
T ss_dssp HTTCCSEECCCGGGGTSH
T ss_pred hcCCCCEEecCccccCCH
Confidence 988899998765444433
No 158
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.37 E-value=4.2e-06 Score=80.91 Aligned_cols=157 Identities=17% Similarity=0.205 Sum_probs=99.2
Q ss_pred CCEEEEecCC--CHHHHHHHHHHH-cCCCcEEEEec--CCCc---hhhhc-----CcccccccCChHHHHHHHHHHhccc
Q 013813 158 RPLFVQFCAN--DPEILLNAARRV-EPYCDYVDINL--GCPQ---RIARR-----GNYGAFLMDNLPLVKSLVEKLALNL 224 (436)
Q Consensus 158 ~plivQL~g~--d~e~~~~AA~~v-~~g~D~IdLN~--GCP~---~~~~~-----~~~Gs~Ll~~p~~v~eIv~av~~~~ 224 (436)
..++.=|... +.+...+.++.+ +.|+|.|||+. ..|. +...+ -..| -+.+.+.++++++++.+
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G----~~~~~~~~~v~~ir~~~ 92 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNG----IRFEDVLELSETLRKEF 92 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhhc
Confidence 3445444444 446777777655 45899999974 3332 01100 0011 24567788999999888
Q ss_pred -CccEEEEeccCCChh---hHHHHHHHHHHcCccEEEeccCcc---------------------cc--------------
Q 013813 225 -NVPVSCKIRVFPNLQ---DTIKYAKMLEDAGCSLLAVHGRTR---------------------DE-------------- 265 (436)
Q Consensus 225 -~iPVsVKiRlg~~~~---d~~~~ak~le~aG~d~I~VHgRt~---------------------~~-------------- 265 (436)
++|+.+ + ..++.- ....|++.+.++|+|+++++.-.. .+
T Consensus 93 ~~~Pi~~-m-~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a 170 (262)
T 2ekc_A 93 PDIPFLL-M-TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAA 170 (262)
T ss_dssp TTSCEEE-E-CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHC
T ss_pred CCCCEEE-E-ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC
Confidence 899977 2 111111 124677778888888877632110 00
Q ss_pred --------cCCCCC---cc----CHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 266 --------KDGKKF---RA----DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 266 --------~~~~~g---~a----d~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
..+.+| +. ..+.++++++.+++||+..|||.+++++.+ +.. |||+|++|++++..
T Consensus 171 ~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~-gADgvIVGSai~~~ 240 (262)
T 2ekc_A 171 DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGS-FADGVVVGSALVKL 240 (262)
T ss_dssp SSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHT-TSSEEEECHHHHHH
T ss_pred CCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHc-CCCEEEECHHHHhh
Confidence 000111 11 136788999988999999999999999999 655 89999999998764
No 159
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.36 E-value=5.5e-06 Score=83.91 Aligned_cols=134 Identities=12% Similarity=0.098 Sum_probs=107.7
Q ss_pred CCEEEEecC---CCHHHHHHHH-HHHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEE
Q 013813 158 RPLFVQFCA---NDPEILLNAA-RRVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSC 230 (436)
Q Consensus 158 ~plivQL~g---~d~e~~~~AA-~~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsV 230 (436)
.|+...+.| .+++++.+.+ +.++. |+..|.+.+|++ +++.-.+.++++++.+ ++++.|
T Consensus 138 v~~y~s~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~v 202 (372)
T 3tj4_A 138 VEAYNTDIGWLSFTLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAI 202 (372)
T ss_dssp EEEEECTTCCTTSCHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEecCCccCCCHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEe
Confidence 455444333 3788888766 46678 999999998875 2455577888888887 589999
Q ss_pred EeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCc
Q 013813 231 KIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGC 310 (436)
Q Consensus 231 KiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGa 310 (436)
+...+++.++++++++.+++.|+.+|- +. . .+.|++..+++++.+++||.+.+.+.+.+++.++++...+
T Consensus 203 Dan~~~~~~~a~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 272 (372)
T 3tj4_A 203 DGNGKWDLPTCQRFCAAAKDLDIYWFE-------EP--L-WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAV 272 (372)
T ss_dssp ECTTCCCHHHHHHHHHHTTTSCEEEEE-------SC--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHhhcCCCEEE-------CC--C-CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCC
Confidence 998899999999999999999988873 21 1 1357899999999999999999999999999999998789
Q ss_pred ceeeee
Q 013813 311 EGVLSA 316 (436)
Q Consensus 311 DgVmIG 316 (436)
|.|++-
T Consensus 273 d~v~~k 278 (372)
T 3tj4_A 273 AYVQPD 278 (372)
T ss_dssp SEECCC
T ss_pred CEEEeC
Confidence 988763
No 160
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.36 E-value=5.2e-06 Score=83.94 Aligned_cols=132 Identities=13% Similarity=0.168 Sum_probs=108.7
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC
Q 013813 159 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg 235 (436)
|....+...+++++++.++ .++.|+..|-+..|+. ++.-.+.+++|++.+ ++++.|...-+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~----------------~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGGS----------------KELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecCC----------------HHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4456777789999988775 5678999999998752 455567788888876 58899998889
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.++++++++.+++.|+++|- +. . .+.|++..+++++.+++||.+.+.+.+.++++++++...+|.|++
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE-------qP--~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE-------EP--V-SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE-------CC--B-CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CChHHHHHHHHHHhhcCCCEEE-------CC--C-ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 9999999999999999999884 21 1 134678889999999999999999999999999999888999986
Q ss_pred e
Q 013813 316 A 316 (436)
Q Consensus 316 G 316 (436)
-
T Consensus 265 k 265 (368)
T 3q45_A 265 K 265 (368)
T ss_dssp C
T ss_pred c
Confidence 5
No 161
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.34 E-value=7e-06 Score=83.22 Aligned_cols=137 Identities=12% Similarity=0.129 Sum_probs=109.4
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+...+...+++++.+.++ .++.|+..|.+..|+. +++.-.+.+++|++.+ ++++.|....
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 34555666678888776664 5567999999998752 2445567788888776 5899999998
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++++++.+++.|+++|- +. . .+.|++..+++++.+++||.+.+.+.+.+++.++++...+|.|+
T Consensus 201 ~~~~~~A~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 270 (377)
T 3my9_A 201 ALTPFGAMKILRDVDAFRPTFIE-------QP--V-PRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAIS 270 (377)
T ss_dssp CCCTTTHHHHHHHHHTTCCSCEE-------CC--S-CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEE-------CC--C-CccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEE
Confidence 99999999999999999998883 21 1 13479999999999999999999999999999999988899998
Q ss_pred eehHH
Q 013813 315 SAESL 319 (436)
Q Consensus 315 IGRga 319 (436)
+--+-
T Consensus 271 ~k~~~ 275 (377)
T 3my9_A 271 VKIMK 275 (377)
T ss_dssp CCHHH
T ss_pred ecccc
Confidence 75433
No 162
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.34 E-value=9.8e-07 Score=85.03 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=98.7
Q ss_pred CCCEEEEecCC--CHHHHHHHHHHHc-CCCcEEEEec--CCCch--hhhcCccccccc--CChHHHHHHHHHHhcccCcc
Q 013813 157 DRPLFVQFCAN--DPEILLNAARRVE-PYCDYVDINL--GCPQR--IARRGNYGAFLM--DNLPLVKSLVEKLALNLNVP 227 (436)
Q Consensus 157 e~plivQL~g~--d~e~~~~AA~~v~-~g~D~IdLN~--GCP~~--~~~~~~~Gs~Ll--~~p~~v~eIv~av~~~~~iP 227 (436)
...++.=|... +.+...+.++.+. .|+|.|||.+ .-|.- .+.....--+|. -+.+.+.++++++++. +|
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~P 90 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KA 90 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SE
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CC
Confidence 34466555444 5688888887664 5899999995 44541 111100011111 2457788888888765 67
Q ss_pred EEEEeccCCCh---hhHHHHHHHHHHcCccEEEe-----------------cc---------Cccc-----------c--
Q 013813 228 VSCKIRVFPNL---QDTIKYAKMLEDAGCSLLAV-----------------HG---------RTRD-----------E-- 265 (436)
Q Consensus 228 VsVKiRlg~~~---~d~~~~ak~le~aG~d~I~V-----------------Hg---------Rt~~-----------~-- 265 (436)
+.+= ..++. -....|++.+.++|+|+++| || .+.. +
T Consensus 91 ivlm--~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFi 168 (252)
T 3tha_A 91 LVFM--VYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFI 168 (252)
T ss_dssp EEEE--CCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCE
T ss_pred EEEE--eccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeE
Confidence 7653 11111 12345777777777777776 11 1100 0
Q ss_pred ----cCCCCCcc------CHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 266 ----KDGKKFRA------DWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 266 ----~~~~~g~a------d~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
..+-+|.. -.++++++++..++||+..+||+++++++++.+ +||||.||++++.
T Consensus 169 Y~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~--~ADGVIVGSAiVk 232 (252)
T 3tha_A 169 YLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK--VADGVIVGTSIVK 232 (252)
T ss_dssp EEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT--TSSEEEECHHHHH
T ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh--cCCEEEECHHHHH
Confidence 01112211 135788899888999999999999999998764 6999999999874
No 163
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.34 E-value=2.2e-06 Score=89.69 Aligned_cols=132 Identities=19% Similarity=0.176 Sum_probs=91.8
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLED 250 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~ 250 (436)
..++..+++.|+|.|.+... + | +.+...+.++++++.+ ++|+..+- ..+ .+.++.+.+
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a--------~--g-----~~~~~~~~i~~l~~~~p~~pvi~G~--v~t----~~~a~~~~~ 293 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA--------H--G-----HSAGVLRKIAEIRAHFPNRTLIAGN--IAT----AEGARALYD 293 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS--------C--T-----TCHHHHHHHHHHHHHCSSSCEEEEE--ECS----HHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeee--------c--C-----cchhHHHHHHHHHHHCCCCcEeCCC--ccC----HHHHHHHHH
Confidence 44444555669999998841 1 1 2345667788888887 88998651 112 255677889
Q ss_pred cCccEEEeccC------cccccCCCCCccCHHHHHHHHh---hCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 251 AGCSLLAVHGR------TRDEKDGKKFRADWNAIKAVKN---ALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 251 aG~d~I~VHgR------t~~~~~~~~g~ad~~~i~~ik~---~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
+|+++|.|... ++. ..+. +.+.++.+.++.+ ..++|||+.|||.+..|+.+++.. |||+|++||+++.
T Consensus 294 ~Gad~I~vg~g~g~~~~tr~-~~~~-~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~-GA~~v~vG~~~~~ 370 (491)
T 1zfj_A 294 AGVDVVKVGIGPGSICTTRV-VAGV-GVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAA-GGNAVMLGSMFAG 370 (491)
T ss_dssp TTCSEEEECSSCCTTBCHHH-HTCC-CCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTT
T ss_pred cCCCEEEECccCCcceEEee-ecCC-CCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHc-CCcceeeCHHhhC
Confidence 99999988310 111 0111 2345666666665 468999999999999999999986 9999999999998
Q ss_pred CCccch
Q 013813 322 NPALFA 327 (436)
Q Consensus 322 nP~lf~ 327 (436)
.++...
T Consensus 371 ~~e~~~ 376 (491)
T 1zfj_A 371 TDEAPG 376 (491)
T ss_dssp BSSCCC
T ss_pred CCcCcc
Confidence 766443
No 164
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.33 E-value=3.2e-06 Score=86.38 Aligned_cols=125 Identities=12% Similarity=0.059 Sum_probs=104.1
Q ss_pred CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
|.+++++++.++. ++.|+..|.|++|+ +++.-.+.+++|++.+ ++++.|....+++.++++
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~ 216 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLPRAR 216 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHH
Confidence 4457888877754 56699999999874 3566678888888886 589999999999999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccC-HHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD-WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad-~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++.+++.|+++|- ++ . .+.| ++..+++++.+++||.+.+.+.+.++++++++...+|.|++-
T Consensus 217 ~~~~~L~~~~i~~iE------eP---~-~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE------EP---L-RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp HHHHHHGGGCCSEEE------CC---S-CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHhCCCEEE------CC---C-CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999884 11 1 1346 899999999999999999999999999999998789998864
No 165
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.32 E-value=8.4e-06 Score=83.18 Aligned_cols=134 Identities=10% Similarity=0.214 Sum_probs=109.3
Q ss_pred CCEEEEecC---CCHHHHHHHHH-HHcC---CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccE
Q 013813 158 RPLFVQFCA---NDPEILLNAAR-RVEP---YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPV 228 (436)
Q Consensus 158 ~plivQL~g---~d~e~~~~AA~-~v~~---g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPV 228 (436)
.|+...+.+ .+++++++.++ .++. |+..|-+..|.+ +++.-.+.+++|++.+ ++++
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSEE
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEE
Confidence 455565555 68888887774 5678 999999998753 3555667788888876 5899
Q ss_pred EEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc
Q 013813 229 SCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET 308 (436)
Q Consensus 229 sVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t 308 (436)
.|...-+++.++++++++.+++.|+.+|- +. . .+.|++..+++++.+++||.+.+.+.+.+++.++++..
T Consensus 223 ~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 292 (390)
T 3ugv_A 223 MVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EP--V-VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAG 292 (390)
T ss_dssp EEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC--S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC--C-CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcC
Confidence 99998899999999999999999998883 21 1 13478999999999999999999999999999999987
Q ss_pred Ccceeeee
Q 013813 309 GCEGVLSA 316 (436)
Q Consensus 309 GaDgVmIG 316 (436)
.+|.|++-
T Consensus 293 a~d~v~ik 300 (390)
T 3ugv_A 293 ACDLVMPD 300 (390)
T ss_dssp CCSEECCB
T ss_pred CCCEEEeC
Confidence 89998865
No 166
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.31 E-value=1.2e-05 Score=81.93 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=109.7
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 157 DRPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
..|+...+...+++++++.++ .++. |+..|-+..|++ +++.-.+.++++++.+ ++++.|..
T Consensus 156 ~v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDa 220 (383)
T 3toy_A 156 PIPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDF 220 (383)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 345666655578998887775 5678 999999998753 3555667788888876 58899998
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.-+|+.++++++++.+++.|+.+|- +.. .+.|++..+++++.+++||.+.+.+.+.+++.++++...+|.
T Consensus 221 N~~~~~~~A~~~~~~l~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 290 (383)
T 3toy_A 221 NQSLDPAEATRRIARLADYDLTWIE-------EPV---PQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDF 290 (383)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEE-------CCS---CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSE
T ss_pred CCCCCHHHHHHHHHHHHhhCCCEEE-------CCC---CcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 8899999999999999999998883 211 134789999999999999999999999999999999878998
Q ss_pred eeee
Q 013813 313 VLSA 316 (436)
Q Consensus 313 VmIG 316 (436)
|++-
T Consensus 291 v~ik 294 (383)
T 3toy_A 291 IMPD 294 (383)
T ss_dssp ECCC
T ss_pred EEeC
Confidence 8753
No 167
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.30 E-value=1.3e-05 Score=78.11 Aligned_cols=143 Identities=16% Similarity=0.132 Sum_probs=108.2
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
-+.|+..+=|..++.++.+| ...|+|+|=|+..+ + +.+.+.++++..++ .++-+.|-+.
T Consensus 119 v~lPVl~Kdfi~d~~qi~ea---~~~GAD~VlLi~a~--------------L-~~~~l~~l~~~a~~-lGl~~lvevh-- 177 (272)
T 3tsm_A 119 CSLPALRKDFLFDPYQVYEA---RSWGADCILIIMAS--------------V-DDDLAKELEDTAFA-LGMDALIEVH-- 177 (272)
T ss_dssp SSSCEEEESCCCSTHHHHHH---HHTTCSEEEEETTT--------------S-CHHHHHHHHHHHHH-TTCEEEEEEC--
T ss_pred cCCCEEECCccCCHHHHHHH---HHcCCCEEEEcccc--------------c-CHHHHHHHHHHHHH-cCCeEEEEeC--
Confidence 46888888777888765443 46799999998531 2 35677888877664 4777666642
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
+.+ + ++.+.++|++.|-+..|.-.. . ..|++...++.+.+ ++|||+.|||.|++|+.++.+. |+|+|
T Consensus 178 -~~e---E-l~~A~~~ga~iIGinnr~l~t---~--~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~-Ga~gv 246 (272)
T 3tsm_A 178 -DEA---E-MERALKLSSRLLGVNNRNLRS---F--EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKS-GIGTF 246 (272)
T ss_dssp -SHH---H-HHHHTTSCCSEEEEECBCTTT---C--CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTT-TCCEE
T ss_pred -CHH---H-HHHHHhcCCCEEEECCCCCcc---C--CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHc-CCCEE
Confidence 222 2 455678999999998886432 2 46888888888876 6999999999999999999875 99999
Q ss_pred eeehHHhhCCccchhhh
Q 013813 314 LSAESLLENPALFAGFR 330 (436)
Q Consensus 314 mIGRgal~nP~lf~~i~ 330 (436)
.||++++..++.-..++
T Consensus 247 LVG~almr~~d~~~~~~ 263 (272)
T 3tsm_A 247 LIGESLMRQHDVAAATR 263 (272)
T ss_dssp EECHHHHTSSCHHHHHH
T ss_pred EEcHHHcCCcCHHHHHH
Confidence 99999999998766554
No 168
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.30 E-value=7.4e-06 Score=82.81 Aligned_cols=134 Identities=15% Similarity=0.155 Sum_probs=107.1
Q ss_pred CCEEEEecCCCH-HHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 158 RPLFVQFCANDP-EILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~-e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.|+...+...++ +.+.++++.++ .|+..+.|..|+. +++.-.+.+++|++.+ ++++.|+..
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 344444554454 45667777776 6999999998752 3455677888888887 479999999
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.+++.++++.+++.|+++|. +.. .+.|++..+++++.+++||.+.+.+.+.+++.++++...+|.|
T Consensus 197 ~~~~~~~a~~~~~~l~~~~i~~iE-------qP~---~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v 266 (370)
T 1chr_A 197 QAWDEQVASVYIPELEALGVELIE-------QPV---GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVF 266 (370)
T ss_dssp TCCCTTHHHHHTHHHHTTTEEEEE-------CCS---CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 999999999999999999998873 211 1457889999999999999999999999999999998789999
Q ss_pred eee
Q 013813 314 LSA 316 (436)
Q Consensus 314 mIG 316 (436)
++-
T Consensus 267 ~~k 269 (370)
T 1chr_A 267 SLK 269 (370)
T ss_dssp EEC
T ss_pred EEC
Confidence 875
No 169
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.29 E-value=6.8e-07 Score=85.61 Aligned_cols=89 Identities=18% Similarity=0.271 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+++++|+.+.+.|++.+++-.-..... + ...+++.++++.+.+.+|+...|||+|.++++++|+. |||-|.+|+.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~-~--~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~-GadkVii~t~ 106 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKD-P--SKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDC-GVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHC-G--GGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHT-TCSEEEECTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccc-c--chhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHc-CCCEEEEccc
Confidence 5788999999999999998864433211 1 1567899999999999999999999999999999996 9999999999
Q ss_pred HhhCCccchhhhh
Q 013813 319 LLENPALFAGFRT 331 (436)
Q Consensus 319 al~nP~lf~~i~~ 331 (436)
++.||.++.++..
T Consensus 107 a~~~p~li~e~~~ 119 (243)
T 4gj1_A 107 AIKDATLCLEILK 119 (243)
T ss_dssp TTTCHHHHHHHHH
T ss_pred cccCCchHHHHHh
Confidence 9999999877653
No 170
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.29 E-value=7.9e-06 Score=84.30 Aligned_cols=149 Identities=11% Similarity=0.156 Sum_probs=114.4
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCccccc------------c-----c---CChHHHH
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF------------L-----M---DNLPLVK 214 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~------------L-----l---~~p~~v~ 214 (436)
...|+...+.+.+++++++.++ .++.||..|-+..|-|... ..||.. . . ++.+...
T Consensus 137 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~---~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~ 213 (424)
T 3v3w_A 137 ERILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIA---KTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIP 213 (424)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS---CCTTCC-----CCSCCBSSCCEEEECHHHHHHHHH
T ss_pred CceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCcccc---ccccccccccccccccccccccccccchhHHHHHH
Confidence 3445555677889999998885 5677999999998864210 001110 0 0 1145677
Q ss_pred HHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc
Q 013813 215 SLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 292 (436)
Q Consensus 215 eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian 292 (436)
+++++|++.+ ++++.|...-+++.++++++++.+++.|+++|. +... +.+++..+++++.+++||++.
T Consensus 214 e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~d 283 (424)
T 3v3w_A 214 DVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DAVP---AENQESFKLIRQHTTTPLAVG 283 (424)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCSC---CSSTTHHHHHHHHCCSCEEEC
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---hHhHHHHHHHHhhCCCCEEEc
Confidence 8889999887 689999988899999999999999999999884 1111 347788999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 293 GNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 293 GGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
+.+.+.++++++++...+|.|++--
T Consensus 284 E~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 284 EVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp TTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred cCcCCHHHHHHHHHcCCCCeEeecc
Confidence 9999999999999987899998753
No 171
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.29 E-value=5.7e-06 Score=85.39 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=112.5
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCccccc---c--------------c---CChHHHHH
Q 013813 157 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAF---L--------------M---DNLPLVKS 215 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~---L--------------l---~~p~~v~e 215 (436)
..|+...+.+.+++++++.++ .++.||..|-+..|.|... ..||.. . . ++.+...+
T Consensus 139 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~---~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 215 (425)
T 3vcn_A 139 GVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLA---STYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPK 215 (425)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS---CCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCcccc---ccccccccccccCcccccccccccccchhHHHHHHH
Confidence 445555667889999998885 5677999999998874310 001100 0 0 00234567
Q ss_pred HHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEcc
Q 013813 216 LVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANG 293 (436)
Q Consensus 216 Iv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianG 293 (436)
++++|++.+ ++++.|...-+++.++++++++.+++.|+++|. +... +.+++..+++++.+++||++.+
T Consensus 216 ~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~iPIa~dE 285 (425)
T 3vcn_A 216 LFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE-------DSVP---AENQAGFRLIRQHTTTPLAVGE 285 (425)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CCSC---CSSTTHHHHHHHHCCSCEEECT
T ss_pred HHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CCCC---hhhHHHHHHHHhcCCCCEEeCC
Confidence 788888876 589999988899999999999999999999884 1111 3477889999999999999999
Q ss_pred CCCCHHHHHHHHHhcCcceeeeehH
Q 013813 294 NVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 294 GI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+.+.++++++++...+|.|++--+
T Consensus 286 ~~~~~~~~~~~i~~~a~d~v~~k~~ 310 (425)
T 3vcn_A 286 IFAHVWDAKQLIEEQLIDYLRATVL 310 (425)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCTT
T ss_pred CcCCHHHHHHHHHcCCCCeEecChh
Confidence 9999999999999878999987543
No 172
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.28 E-value=8.4e-06 Score=83.12 Aligned_cols=143 Identities=13% Similarity=0.187 Sum_probs=115.2
Q ss_pred CCEEEEec----CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEE-
Q 013813 158 RPLFVQFC----ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVS- 229 (436)
Q Consensus 158 ~plivQL~----g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVs- 229 (436)
.|+...++ +.+++.+++.++ .++.|+..|.|++|| +++.-.+.+++|++.+ ++++.
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEEE
Confidence 45556677 678999888875 557799999999876 2455677888888876 57888
Q ss_pred EEeccCCChhhHHHHHHHHHHcCc--cEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHh
Q 013813 230 CKIRVFPNLQDTIKYAKMLEDAGC--SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEE 307 (436)
Q Consensus 230 VKiRlg~~~~d~~~~ak~le~aG~--d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~ 307 (436)
|...-+++.+++.++++.+++.|+ .+|. ++. .+.|++..+++++.+++|| .+.+.+.++++++++.
T Consensus 192 vDan~~~~~~~A~~~~~~l~~~~i~~~~iE------qP~----~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~ 259 (391)
T 3gd6_A 192 YDFSHLLNWKDAHRAIKRLTKYDLGLEMIE------SPA----PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIKK 259 (391)
T ss_dssp EECTTCSCHHHHHHHHHHHTTCCSSCCEEE------CCS----CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHHH
T ss_pred ecCCCCcCHHHHHHHHHHHHhcCCCcceec------CCC----ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHHc
Confidence 998889999999999999999999 7774 111 1347999999999999999 8889999999999998
Q ss_pred cCcceeeeehHHhhCCccchh
Q 013813 308 TGCEGVLSAESLLENPALFAG 328 (436)
Q Consensus 308 tGaDgVmIGRgal~nP~lf~~ 328 (436)
..+|.|++--+-++...-+.+
T Consensus 260 ~~~d~v~~k~~~~GGit~~~~ 280 (391)
T 3gd6_A 260 DAIDIFNISPVFIGGLTSAKK 280 (391)
T ss_dssp TCCSEEEECHHHHTSHHHHHH
T ss_pred CCCCEEEECchhcCCHHHHHH
Confidence 889999998777766554433
No 173
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.27 E-value=6.4e-06 Score=83.00 Aligned_cols=128 Identities=11% Similarity=0.066 Sum_probs=101.1
Q ss_pred CEEEEecC-CCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 159 PLFVQFCA-NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 159 plivQL~g-~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
|+...++. .+++++.+.|+. ++.||+.|.|+.| |+...++++++++.+ ++++.+...-
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan~ 192 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDANT 192 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECTT
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEeccC
Confidence 44444443 489999888864 5679999999863 233346677777665 4788888877
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++ +++++.+++.|+++|- +. . .+.||+..+++++.+++||++.+.+.+.++++++++...+|.|+
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE-------~P--~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 261 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIE-------QP--L-EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVN 261 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEE-------CC--S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHH-HHHHHHHHhcCCCeEe-------CC--C-ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEE
Confidence 899899 9999999999999873 21 1 13589999999999999999999999999999999987899998
Q ss_pred e
Q 013813 315 S 315 (436)
Q Consensus 315 I 315 (436)
+
T Consensus 262 i 262 (368)
T 1sjd_A 262 I 262 (368)
T ss_dssp E
T ss_pred e
Confidence 7
No 174
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.27 E-value=1.3e-05 Score=81.06 Aligned_cols=135 Identities=12% Similarity=0.101 Sum_probs=108.2
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 157 DRPLFVQFCANDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
..|+...+...+++++++.++ .++. |+..|-+..|+.. .+.-.+++++|++.+ ++++.|..
T Consensus 128 ~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~---------------~~~d~~~v~avR~a~g~~~~l~vDa 192 (367)
T 3dg3_A 128 RMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRRP---------------VQLDTAVVRALRERFGDAIELYVDG 192 (367)
T ss_dssp EEEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCSS---------------THHHHHHHHHHHHHHGGGSEEEEEC
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCCh---------------hhhHHHHHHHHHHHhCCCCEEEEEC
Confidence 345666777788999887774 5677 9999999987511 013456777777776 57899998
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.-+++.+++.++++.+++.|+++|. ++. .+.|++..+++++.+++||.+.+.+.+.+++.++++...+|.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iE------qP~----~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 262 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAE------ELC----PADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATA 262 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEE------SCS----CTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEE------CCC----CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 8899999999999999999998874 111 134788899999999999999999999999999999878999
Q ss_pred eeee
Q 013813 313 VLSA 316 (436)
Q Consensus 313 VmIG 316 (436)
|++=
T Consensus 263 v~~k 266 (367)
T 3dg3_A 263 ISIK 266 (367)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9874
No 175
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.26 E-value=3e-06 Score=80.40 Aligned_cols=149 Identities=15% Similarity=0.276 Sum_probs=100.8
Q ss_pred EEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCCh
Q 013813 160 LFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNL 238 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~ 238 (436)
++.+|...|...+.+.++.+. .|+|.|.+-.- . |..+ .+...-.++++++++.++.|+.|-+=. .+.
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~-------D---G~fv-p~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp 74 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVM-------D---GRFV-PNITIGPLIVDAIRPLTKKTLDVHLMI-VEP 74 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEE-------B---SSSS-SCBCBCHHHHHHHGGGCCSEEEEEEES-SSG
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEE-------e---cCCC-cchhhhHHHHHHHHhhcCCcEEEEEEc-cCH
Confidence 678899999999999998775 58998766531 0 1111 112222377788888777777755433 222
Q ss_pred hhHHHHHHHHHHcCccEEEeccC--cccc--------------------------c-----------------CCCC---
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGR--TRDE--------------------------K-----------------DGKK--- 270 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgR--t~~~--------------------------~-----------------~~~~--- 270 (436)
.++++.+.++|+|+|++|.- ..+. . .+..
T Consensus 75 ---~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~ggq~ 151 (230)
T 1tqj_A 75 ---EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGGQS 151 (230)
T ss_dssp ---GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----CC
T ss_pred ---HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCCcc
Confidence 23556677788888888765 2100 0 0000
Q ss_pred -CccCHHHHHHHHhhC-----CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 271 -FRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 271 -g~ad~~~i~~ik~~~-----~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
.+..++.++++++.. ++||.+-|||+. +.+.++.+. |||+|.+|++++..++.
T Consensus 152 ~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~a-Gad~vvvGSai~~a~d~ 210 (230)
T 1tqj_A 152 FIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEA-GANAIVAGSAVFNAPNY 210 (230)
T ss_dssp CCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHH-TCCEEEESHHHHTSSCH
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHc-CCCEEEECHHHHCCCCH
Confidence 123467788888876 899999999997 999998875 99999999999987764
No 176
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.26 E-value=1.9e-05 Score=80.28 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=109.7
Q ss_pred CCCEEEEecCCCHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRl 234 (436)
..|+...+...+++.+.+.+ +.++.|+..|-+..|+. +++.-.+.++++++.+ ++++.|....
T Consensus 137 ~v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~ 201 (385)
T 3i6e_A 137 TIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQ 201 (385)
T ss_dssp EEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred ceEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 34566677777888877655 45667999999998752 2444566777777765 6789999999
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+|+.++++++++.+++.|+.+|- +.. .+.||+..+++++.+++||.+...+.+.+++.++++...+|.|+
T Consensus 202 ~~~~~~A~~~~~~L~~~~i~~iE-------qP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~ 271 (385)
T 3i6e_A 202 GLEIDEAVPRVLDVAQFQPDFIE-------QPV---RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVS 271 (385)
T ss_dssp CCCGGGHHHHHHHHHTTCCSCEE-------CCS---CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------CCC---CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 99999999999999999998873 211 13579999999999999999999999999999999988899998
Q ss_pred eehHH
Q 013813 315 SAESL 319 (436)
Q Consensus 315 IGRga 319 (436)
+--+-
T Consensus 272 ~k~~~ 276 (385)
T 3i6e_A 272 IKIMK 276 (385)
T ss_dssp ECHHH
T ss_pred ecccc
Confidence 76433
No 177
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.26 E-value=2.4e-05 Score=79.64 Aligned_cols=140 Identities=12% Similarity=0.171 Sum_probs=115.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEe
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKI 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKi 232 (436)
...|+...+...+++++++.++ .++.|+..|.+.+||+.. ..+++.-.+.+++|++.+ ++++.|..
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vDa 201 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLADA 201 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 4567888888999999988885 457799999999998732 124666778899999987 57899999
Q ss_pred ccCCChhhHHHHHHHH-HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 233 RVFPNLQDTIKYAKML-EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~l-e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
.-+++.+++.++++.+ ++.++ +| ++ .. + +|+..+++++.+++||.+...+.+.+++.++++...+|
T Consensus 202 N~~~~~~~A~~~~~~l~~~~~i-~i-------Ee--P~--~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d 268 (386)
T 3fv9_G 202 NNGLTVEHALRMLSLLPPGLDI-VL-------EA--PC--A-SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCD 268 (386)
T ss_dssp TTCCCHHHHHHHHHHSCSSCCC-EE-------EC--CC--S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHHHHHhhccCCc-EE-------ec--CC--C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 8899999999999999 77776 65 22 11 2 78999999999999999999999999999999988899
Q ss_pred eeeeehHH
Q 013813 312 GVLSAESL 319 (436)
Q Consensus 312 gVmIGRga 319 (436)
.|++--+-
T Consensus 269 ~v~~k~~~ 276 (386)
T 3fv9_G 269 GVGLKVSK 276 (386)
T ss_dssp EEEEEHHH
T ss_pred EEEECccc
Confidence 99876443
No 178
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.24 E-value=3.7e-06 Score=79.85 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=70.6
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+.++...+|...+-.|...|-+.+ +.. ..+.+.++++++.+ ++||++.|||+|++++++++ . |||+|++
T Consensus 138 ~~e~~~~~a~~a~~~g~~~VYld~-sG~-------~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~-gAD~VVV 207 (228)
T 3vzx_A 138 NMDDIVAYARVSELLQLPIFYLEY-SGV-------LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVV 207 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-------CCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEecC-CCC-------cCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-h-CCCEEEE
Confidence 346677778878888888887776 321 12789999999999 79999999999999999988 5 9999999
Q ss_pred ehHHhhCCccchhhh
Q 013813 316 AESLLENPALFAGFR 330 (436)
Q Consensus 316 GRgal~nP~lf~~i~ 330 (436)
|.++..||.++.++-
T Consensus 208 GSa~v~~p~~~~~~v 222 (228)
T 3vzx_A 208 GNAVYEDFDRALKTV 222 (228)
T ss_dssp CTHHHHCHHHHHHHH
T ss_pred ChHHhcCHHHHHHHH
Confidence 999999999988664
No 179
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.24 E-value=4.2e-06 Score=85.32 Aligned_cols=103 Identities=18% Similarity=0.310 Sum_probs=79.3
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
+++.+.++++.+++. +.++.++++. .+..++++.+.++|+|.|.+|++...+....+ ..+|+.+..+++.+++|
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~----~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~-~~~~~~i~~l~~~~~~p 213 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP----QNVREIAPIVIKAGADLLVIQGTLISAEHVNT-GGEALNLKEFIGSLDVP 213 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT----TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC------CHHHHHHHCSSC
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC----ccHHHHHHHHHHCCCCEEEEeCCccccccCCC-cccHHHHHHHHHhcCCC
Confidence 789999999998876 8999999764 24466788888899999999977532211111 12687889999999999
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
|++ |||.|+++++.+++ .|||+|++|+|.
T Consensus 214 vi~-ggi~t~e~a~~~~~-~Gad~i~vg~Gg 242 (393)
T 2qr6_A 214 VIA-GGVNDYTTALHMMR-TGAVGIIVGGGE 242 (393)
T ss_dssp EEE-ECCCSHHHHHHHHT-TTCSEEEESCCS
T ss_pred EEE-CCcCCHHHHHHHHH-cCCCEEEECCCc
Confidence 999 99999999999887 499999998754
No 180
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.24 E-value=2.6e-06 Score=82.94 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
..++...+..|...+-+-+.. .+.+.+.++++++.+ ++||++.|||+|.++++++++. |||+|.+|+++
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~--------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~a-GAD~VVVGSAa 259 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN--------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDS-GADYVGFAGAL 259 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS--------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHT-TCSEEEESGGG
T ss_pred HHHHHHHHHcCCCEEEEcCCC--------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHc-CCCEEEECchh
Confidence 677887888898888776422 146789999999999 8999999999999999999986 99999999999
Q ss_pred hhC--Cccchhhh
Q 013813 320 LEN--PALFAGFR 330 (436)
Q Consensus 320 l~n--P~lf~~i~ 330 (436)
+.| |.++.++.
T Consensus 260 v~d~~Pelv~e~a 272 (286)
T 3vk5_A 260 EQPDWRSALAEIA 272 (286)
T ss_dssp SSTTHHHHHHHHH
T ss_pred hcCCCHHHHHHHH
Confidence 999 77887765
No 181
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.23 E-value=9.1e-06 Score=76.63 Aligned_cols=144 Identities=9% Similarity=0.113 Sum_probs=95.4
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
+.|+.+-|+.+|++.+.+.+ ++.|+|+|-+|.+.. ++.+.++++.+++. ++.+.+-+....
T Consensus 64 ~~~~~v~lmv~d~~~~i~~~--~~agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p~t 124 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEPL--AKAGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRPGT 124 (228)
T ss_dssp CSEEEEEEESSCGGGGHHHH--HHHTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECTTS
T ss_pred CCcEEEEEEecCHHHHHHHH--HHcCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 56899999999998776555 336899999995421 11124555666543 566665543333
Q ss_pred ChhhHHHHHHHHHHc--CccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 237 NLQDTIKYAKMLEDA--GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 237 ~~~d~~~~ak~le~a--G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
..+ .++.+.+. ++|+|.+...........-.+..++.++++++.. ++||++.|||+. +.+.++++. |+|+|
T Consensus 125 ~~e----~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~a-GaD~v 198 (228)
T 1h1y_A 125 PVE----EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAASA-GANCI 198 (228)
T ss_dssp CGG----GGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHHHH-TCCEE
T ss_pred CHH----HHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHHHc-CCCEE
Confidence 322 23344455 8999987444321110001123456677888877 899999999997 889888876 99999
Q ss_pred eeehHHhhCCcc
Q 013813 314 LSAESLLENPAL 325 (436)
Q Consensus 314 mIGRgal~nP~l 325 (436)
.+|++++..++.
T Consensus 199 vvGsai~~~~d~ 210 (228)
T 1h1y_A 199 VAGSSIFGAAEP 210 (228)
T ss_dssp EESHHHHTSSCH
T ss_pred EECHHHHCCCCH
Confidence 999999887663
No 182
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.23 E-value=2.6e-05 Score=75.41 Aligned_cols=127 Identities=14% Similarity=0.144 Sum_probs=87.7
Q ss_pred HHHHHcCCCcEEEEec--CCCchhhhcCcccccccCChHHHHHHHHHHhcc---cCccEEEEecc-CC------ChhhHH
Q 013813 175 AARRVEPYCDYVDINL--GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN---LNVPVSCKIRV-FP------NLQDTI 242 (436)
Q Consensus 175 AA~~v~~g~D~IdLN~--GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~---~~iPVsVKiRl-g~------~~~d~~ 242 (436)
+.+.++.|+|+|++.. |. .+.+.+.+.++++++. .++||.+=..+ |. +.+...
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~ 162 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVA 162 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHH
Confidence 3345678999999854 41 1223333333333332 37888776544 11 334445
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCC-cEEEccCCC--CHHHHHHHHH---hcCcceeeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI-PVLANGNVR--HMEDVQKCLE---ETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~i-PVianGGI~--s~eda~~~l~---~tGaDgVmIG 316 (436)
..++.+.++|+|+|-+. +. .+.+.++++++.+++ ||++.|||+ +.+++.+++. ..|++|+.+|
T Consensus 163 ~a~~~a~~~GAD~vkt~--~~---------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 163 YAARIALELGADAMKIK--YT---------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp HHHHHHHHHTCSEEEEE--CC---------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCCEEEEc--CC---------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 55788999999998665 11 146788898888777 999999999 9999988873 2599999999
Q ss_pred hHHhhCCccch
Q 013813 317 ESLLENPALFA 327 (436)
Q Consensus 317 Rgal~nP~lf~ 327 (436)
|+++..|+.-.
T Consensus 232 raI~~~~dp~~ 242 (263)
T 1w8s_A 232 RNVWQRRDALK 242 (263)
T ss_dssp HHHHTSTTHHH
T ss_pred hhhcCCcCHHH
Confidence 99998887543
No 183
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.20 E-value=3.6e-06 Score=97.28 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=81.4
Q ss_pred ChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccC------CCCCccCHHHHHHH
Q 013813 209 NLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD------GKKFRADWNAIKAV 281 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~------~~~g~ad~~~i~~i 281 (436)
+++.+.++++.+++.. ++||.||+=... .....|+.+.++|+|+|+|.|....... ...|.+-...+.++
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev 1052 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSRS---GIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEV 1052 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECCT---THHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCCC---ChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHH
Confidence 3567889999999887 899999965432 3334688899999999999655322100 00112223456666
Q ss_pred HhhC-------CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 282 KNAL-------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 282 k~~~-------~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
.+.+ ++|||+.|||.+..|+.+++.. |||+|++||++|...
T Consensus 1053 ~~al~~~glr~~VpVIAdGGIrtG~DVakALaL-GAdaV~iGTafL~a~ 1100 (1479)
T 1ea0_A 1053 HQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAML-GAEEFGIGTASLIAM 1100 (1479)
T ss_dssp HHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHT-TCSEEECCHHHHHHH
T ss_pred HHHHHHcCCCCCceEEEECCCCCHHHHHHHHHc-CCCeeeEcHHHHHHH
Confidence 6543 6999999999999999999997 999999999997643
No 184
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.16 E-value=4.2e-05 Score=77.74 Aligned_cols=135 Identities=15% Similarity=0.199 Sum_probs=110.2
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEecc
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRl 234 (436)
.|+...++..+++++++.++ .++.||..|-+..|. +++.-.+.++++++.+ ++++.|...-
T Consensus 132 v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 132 IVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 45556777789998887775 567799999999763 3566677888898887 4799999888
Q ss_pred CCChhhHHHHHHHHHH--cCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 235 FPNLQDTIKYAKMLED--AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 235 g~~~~d~~~~ak~le~--aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
+++.++++.+++.+++ .|+.+|- +.. .+.|++..+++++.+++||.++..+.+.+++.++++...+|.
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 265 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIE-------QPV---KYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNM 265 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEE-------CCS---CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSE
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEE-------CCC---CcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCE
Confidence 9999999999999999 7777763 211 134789999999999999999999999999999999877999
Q ss_pred eeeehH
Q 013813 313 VLSAES 318 (436)
Q Consensus 313 VmIGRg 318 (436)
|++--+
T Consensus 266 v~~k~~ 271 (379)
T 3r0u_A 266 INIKLA 271 (379)
T ss_dssp EEECHH
T ss_pred EEECcc
Confidence 987543
No 185
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.15 E-value=3.5e-05 Score=79.88 Aligned_cols=157 Identities=14% Similarity=0.146 Sum_probs=115.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCch------hhh-----cCc------------ccccc--cCC
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQR------IAR-----RGN------------YGAFL--MDN 209 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~------~~~-----~~~------------~Gs~L--l~~ 209 (436)
+..|+...+.+.+++++++.++ .++.||..|-+.+|-... +.+ .+. -|..+ ..+
T Consensus 143 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (440)
T 3t6c_A 143 DGIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAY 222 (440)
T ss_dssp SSEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHH
T ss_pred CeeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhh
Confidence 3445555677889999998885 557799999999874210 000 000 00000 001
Q ss_pred hHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCC
Q 013813 210 LPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI 287 (436)
Q Consensus 210 p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~i 287 (436)
.+...+++++|++++ ++++.|+...+++.++++++++.+++.|+.+|- +... +.|++..+++++.+++
T Consensus 223 ~~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~i 292 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------DPVA---PENTEWLKMLRQQSST 292 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CSSC---GGGGGGHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------CCCC---hhhHHHHHHHHhhcCC
Confidence 356677889999887 589999999999999999999999999999883 2111 3467888999999999
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
||.+.+.+.+.+++.++++...+|.|++--+-.+.
T Consensus 293 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GG 327 (440)
T 3t6c_A 293 PIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGG 327 (440)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTS
T ss_pred CEEeCcccCCHHHHHHHHHcCCccceeechhhhCC
Confidence 99999999999999999998889999876544443
No 186
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.15 E-value=4.1e-06 Score=78.26 Aligned_cols=78 Identities=13% Similarity=0.214 Sum_probs=59.2
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++.+.+.|+|+|.+......+......+.+|+.++++++..++||++.||| +.+++.++++. |+|+|++|++++.+++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~-Ga~gv~vgs~i~~~~d 200 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQA-GADGIAVMSGIFSSAE 200 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHT-TCSEEEESHHHHTSSS
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHc-CCCEEEEhHHhhCCCC
Confidence 456678999999886542221111111467899999998889999999999 89999999985 9999999999987765
No 187
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.14 E-value=2.1e-05 Score=75.79 Aligned_cols=141 Identities=17% Similarity=0.209 Sum_probs=99.1
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
-+.|+..+=|-.++.++.+ ..+.|+|+|-|... .+. +.+.++++..+. .++.+.|-+.
T Consensus 105 v~lPvl~kdfI~d~~qi~~---a~~~GAD~VlL~~~--------------~l~--~~l~~l~~~a~~-lGl~~lvev~-- 162 (254)
T 1vc4_A 105 VDLPLLRKDFVVDPFMLEE---ARAFGASAALLIVA--------------LLG--ELTGAYLEEARR-LGLEALVEVH-- 162 (254)
T ss_dssp CCSCEEEESCCCSHHHHHH---HHHTTCSEEEEEHH--------------HHG--GGHHHHHHHHHH-HTCEEEEEEC--
T ss_pred cCCCEEECCcCCCHHHHHH---HHHcCCCEEEECcc--------------chH--HHHHHHHHHHHH-CCCeEEEEEC--
Confidence 3678777766677765443 34569999988732 222 456777765443 3544444322
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-----CCcEEEccCCCCHHHHHHHHHhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-----~iPVianGGI~s~eda~~~l~~tGa 310 (436)
+.++ ++.+.+.|++.|-++.|.... ...|++...++.+.+ ++|+++.|||.|++|+.++.+ |+
T Consensus 163 -~~~E----~~~a~~~gad~IGvn~~~l~~-----~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~--Ga 230 (254)
T 1vc4_A 163 -TERE----LEIALEAGAEVLGINNRDLAT-----LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG--LF 230 (254)
T ss_dssp -SHHH----HHHHHHHTCSEEEEESBCTTT-----CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT--TC
T ss_pred -CHHH----HHHHHHcCCCEEEEccccCcC-----CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc--CC
Confidence 2233 335677899999998886431 256777777777765 799999999999999999886 99
Q ss_pred ceeeeehHHhhCCccchhhh
Q 013813 311 EGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 311 DgVmIGRgal~nP~lf~~i~ 330 (436)
|+|.||++++..++.-..++
T Consensus 231 ~gvlVGsAl~~~~d~~~~~~ 250 (254)
T 1vc4_A 231 DAVLIGTSLMRAPDLEAALR 250 (254)
T ss_dssp SEEEECHHHHTSSCHHHHHH
T ss_pred CEEEEeHHHcCCCCHHHHHH
Confidence 99999999999888765443
No 188
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.14 E-value=1.5e-05 Score=82.21 Aligned_cols=150 Identities=11% Similarity=0.137 Sum_probs=109.2
Q ss_pred CCCEEEEecCCCHHHHHHHH-HHHcCCCcEEEEecCCCchhhh---cCcccc--------cc--------cCChHHHHHH
Q 013813 157 DRPLFVQFCANDPEILLNAA-RRVEPYCDYVDINLGCPQRIAR---RGNYGA--------FL--------MDNLPLVKSL 216 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~---~~~~Gs--------~L--------l~~p~~v~eI 216 (436)
..|+.....+.+++++.+.+ +.++.||..|-+..|.|..... ..+.|- .+ ....++..++
T Consensus 138 ~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 138 GVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 34666677788888877666 4567899999999987642100 000000 00 0012456688
Q ss_pred HHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccC
Q 013813 217 VEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 294 (436)
Q Consensus 217 v~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGG 294 (436)
+++|++++ ++++.|...-+++.++++++++.+++.|+++|. +... +.|++..+++++.+++||.+.+.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~iPIa~dE~ 287 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME-------DPTP---AENQACFRLIRQHTVTPIAVGEV 287 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CCSC---CSSGGGGHHHHTTCCSCEEECTT
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CCCC---hHHHHHHHHHHhcCCCCEEeCCC
Confidence 99999887 689999998899999999999999999999884 1111 34678889999999999999999
Q ss_pred CCCHHHHHHHHHhcCcceeeee
Q 013813 295 VRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 295 I~s~eda~~~l~~tGaDgVmIG 316 (436)
+.+.++++++++...+|.|++-
T Consensus 288 ~~~~~~~~~~i~~ga~d~v~~k 309 (426)
T 4e4f_A 288 FNSIWDCKQLIEEQLIDYIRTT 309 (426)
T ss_dssp CCSGGGTHHHHHTTCCSEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999998789999864
No 189
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.14 E-value=1.5e-05 Score=83.91 Aligned_cols=123 Identities=19% Similarity=0.150 Sum_probs=81.7
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-C-ccEEEEeccCCChhhHHHHHHHHHHcCcc
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-N-VPVSCKIRVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~-iPVsVKiRlg~~~~d~~~~ak~le~aG~d 254 (436)
.+++.+++.|.+.... | ++..+.+.++.+++.. + +||.++--. + .+-++.+.++|+|
T Consensus 249 ~l~e~gv~~l~Vd~~~----------g-----~~~~~~~~i~~lk~~~~~~~~Vi~G~V~--t----~~~a~~l~~aGad 307 (503)
T 1me8_A 249 ALVEAGADVLCIDSSD----------G-----FSEWQKITIGWIREKYGDKVKVGAGNIV--D----GEGFRYLADAGAD 307 (503)
T ss_dssp HHHHHTCSEEEECCSC----------C-----CSHHHHHHHHHHHHHHGGGSCEEEEEEC--S----HHHHHHHHHHTCS
T ss_pred HHHhhhccceEEeccc----------C-----cccchhhHHHHHHHhCCCCceEeecccc--C----HHHHHHHHHhCCC
Confidence 3445588887775420 1 1233555567777665 5 888887322 2 2346678899999
Q ss_pred EEEeccCccc----cc-CCCCCccCHHHHHHHHhhC---------CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHh
Q 013813 255 LLAVHGRTRD----EK-DGKKFRADWNAIKAVKNAL---------RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLL 320 (436)
Q Consensus 255 ~I~VHgRt~~----~~-~~~~g~ad~~~i~~ik~~~---------~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal 320 (436)
.|.| |.... .+ ...-|.+....+.++.+.. ++|||+.|||.+..|+.++|.. |||+||+|+.++
T Consensus 308 ~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal-GA~~V~iG~~~~ 385 (503)
T 1me8_A 308 FIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM-GADFIMLGRYFA 385 (503)
T ss_dssp EEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT-TCSEEEESHHHH
T ss_pred eEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc-CCCEEEECchhh
Confidence 9988 43221 01 0111234566666665442 6999999999999999999997 999999999987
Q ss_pred hC
Q 013813 321 EN 322 (436)
Q Consensus 321 ~n 322 (436)
.-
T Consensus 386 ~~ 387 (503)
T 1me8_A 386 RF 387 (503)
T ss_dssp TB
T ss_pred cc
Confidence 54
No 190
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.14 E-value=1.4e-05 Score=74.18 Aligned_cols=146 Identities=16% Similarity=0.284 Sum_probs=90.7
Q ss_pred EEEEecCCCHHHHHHHHHHHc-CCCcEEEEec--CC-CchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 160 LFVQFCANDPEILLNAARRVE-PYCDYVDINL--GC-PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~-~g~D~IdLN~--GC-P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
+...|...|+..+.++++.+. .|+|.|.+-. |. +. .+-..+ ++++++++.++.|+.+-+=+.
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~----------~~~~g~----~~i~~i~~~~~~~~~v~l~v~ 71 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP----------NISFGA----DVVASMRKHSKLVFDCHLMVV 71 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS----------CBCBCH----HHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC----------ccccCH----HHHHHHHHhCCCCEEEEEeec
Confidence 567788889988999887765 5788866653 32 11 111113 445556665566665543221
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcc--------------------------cc----------------c-CCCCCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTR--------------------------DE----------------K-DGKKFR 272 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~--------------------------~~----------------~-~~~~g~ 272 (436)
+.++ +++.+.++|+|.|++|+-.. .+ . .++.|.
T Consensus 72 -d~~~---~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~ 147 (220)
T 2fli_A 72 -DPER---YVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQ 147 (220)
T ss_dssp -SGGG---GHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSC
T ss_pred -CHHH---HHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccc
Confidence 2122 34666677888887764211 00 0 011121
Q ss_pred -cCH---HHHHHHHhhC-----CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 273 -ADW---NAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 273 -ad~---~~i~~ik~~~-----~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
..| +.++.+++.. ++||++.|||+ ++++.++++. |+|+|.+||+++..++.
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~-Gad~vvvGsai~~~~d~ 207 (220)
T 2fli_A 148 AFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEA-GANVFVAGSYLFKASDL 207 (220)
T ss_dssp CCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHH-TCCEEEESHHHHTSSCH
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHc-CCCEEEEChHHhCCCCH
Confidence 233 4456666554 79999999999 7999887775 99999999999887663
No 191
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.13 E-value=1.7e-05 Score=80.18 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=99.7
Q ss_pred CEEEEecC-CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 159 PLFVQFCA-NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~g-~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
|+...++. .+++++.+.++ .++.|++.|.++.| | +...++++++++.+ ++++.+....+
T Consensus 138 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~-----------------~~d~~~v~avr~a~~~~~l~vDan~~ 199 (375)
T 1r0m_A 138 EVGVSLGIQADEQATVDLVRRHVEQGYRRIKLKIK-P-----------------GWDVQPVRATREAFPDIRLTVDANSA 199 (375)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T-----------------TBSHHHHHHHHHHCTTSCEEEECTTC
T ss_pred eeeEEecCCCCHHHHHHHHHHHHHhcccEEEEecC-h-----------------HHHHHHHHHHHHHcCCCeEEEeCCCC
Confidence 33334433 48998888775 55779999999863 1 22234456666554 67899998888
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.++ +++++.+++.|+++|- ++ . .+.||+..+++++.+++||.+.+.+.+.++++++++...+|.|++
T Consensus 200 ~~~~~-~~~~~~l~~~~i~~iE------qP---~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 200 YTLAD-AGRLRQLDEYDLTYIE------QP---L-AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp CCGGG-HHHHHTTGGGCCSCEE------CC---S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred CCHHH-HHHHHHHHhCCCcEEE------CC---C-CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 99899 9999999999999884 21 1 145789999999999999999999999999999999878999987
No 192
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.12 E-value=5.2e-05 Score=69.74 Aligned_cols=140 Identities=17% Similarity=0.247 Sum_probs=88.7
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 157 DRPLFVQFCAND-PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 157 e~plivQL~g~d-~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
+.|+++-+...| ++.+++.+ ++.|+|+|-+|.+.. .+.+.++++.+++. +.++.+-+- .
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a--~~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~-s 112 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIA--FKAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI-G 112 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHH--HHTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-T
T ss_pred CCeEEEEEEecCccHHHHHHH--HhCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-c
Confidence 678998888888 88766443 456999999996432 23344555555432 455433321 1
Q ss_pred CChhhHHHHHHHHHHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
. .+..+.++.+.+.|+|++.++ +.+.. ..+. .... +.++++++. ++||++.|||+ ++.+.++++. |||+|.
T Consensus 113 ~--~~p~~~~~~~~~~g~d~v~~~~~~~~~-~~g~-~~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~a-Gad~vv 184 (207)
T 3ajx_A 113 I--EDKATRAQEVRALGAKFVEMHAGLDEQ-AKPG-FDLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQKA-GAEVAV 184 (207)
T ss_dssp C--SSHHHHHHHHHHTTCSEEEEECCHHHH-TSTT-CCTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHHHT-TCSEEE
T ss_pred C--CChHHHHHHHHHhCCCEEEEEeccccc-ccCC-CchH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHHHc-CCCEEE
Confidence 2 122223455567799999444 44321 1111 1122 445555443 79999999998 7888888876 999999
Q ss_pred eehHHhhCCc
Q 013813 315 SAESLLENPA 324 (436)
Q Consensus 315 IGRgal~nP~ 324 (436)
+||+++..++
T Consensus 185 vGsaI~~~~d 194 (207)
T 3ajx_A 185 AGGAIYGAAD 194 (207)
T ss_dssp ESHHHHTSSS
T ss_pred EeeeccCCCC
Confidence 9999988665
No 193
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.12 E-value=2.7e-05 Score=73.07 Aligned_cols=140 Identities=11% Similarity=0.178 Sum_probs=90.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecC--CCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLG--CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~G--CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.|+.+-++-++++.+.+.+ .+.|+|+|-++.. .+ +...++++.+++. ++.+.+=+..
T Consensus 68 ~~~~~v~l~vnd~~~~v~~~--~~~Gad~v~vh~~~~~~-----------------~~~~~~~~~~~~~-g~~ig~~~~p 127 (230)
T 1rpx_A 68 DLPLDVHLMIVEPDQRVPDF--IKAGADIVSVHCEQSST-----------------IHLHRTINQIKSL-GAKAGVVLNP 127 (230)
T ss_dssp CSCEEEEEESSSHHHHHHHH--HHTTCSEEEEECSTTTC-----------------SCHHHHHHHHHHT-TSEEEEEECT
T ss_pred CCcEEEEEEecCHHHHHHHH--HHcCCCEEEEEecCccc-----------------hhHHHHHHHHHHc-CCcEEEEeCC
Confidence 57899999999988766665 4579999999843 11 1134555665543 5555555544
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCc---ccccCCCCCccCHHHHHHHHhhC-----CCcEEEccCCCCHHHHHHHHH
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRT---RDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLE 306 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt---~~~~~~~~g~ad~~~i~~ik~~~-----~iPVianGGI~s~eda~~~l~ 306 (436)
+...+.. +.+ ..++|+|.+-+.. ..+. + .+..++.++++++.. ++||++.|||+ ++.+.++++
T Consensus 128 ~t~~e~~----~~~-~~~~d~vl~~~~~pg~~g~~--~-~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~ 198 (230)
T 1rpx_A 128 GTPLTAI----EYV-LDAVDLVLIMSVNPGFGGQS--F-IESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIE 198 (230)
T ss_dssp TCCGGGG----TTT-TTTCSEEEEESSCTTCSSCC--C-CTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHH
T ss_pred CCCHHHH----HHH-HhhCCEEEEEEEcCCCCCcc--c-cHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHH
Confidence 4332222 111 3579998443332 1111 1 112235566677655 79999999999 788988887
Q ss_pred hcCcceeeeehHHhhCCccc
Q 013813 307 ETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 307 ~tGaDgVmIGRgal~nP~lf 326 (436)
. |+|+|.+|+++...++.-
T Consensus 199 a-Gad~vvvgSaI~~a~dp~ 217 (230)
T 1rpx_A 199 A-GANALVAGSAVFGAPDYA 217 (230)
T ss_dssp H-TCCEEEESHHHHTSSCHH
T ss_pred c-CCCEEEEChhhhCCCCHH
Confidence 5 999999999998876643
No 194
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.11 E-value=2.6e-05 Score=74.29 Aligned_cols=130 Identities=17% Similarity=0.095 Sum_probs=85.9
Q ss_pred HHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc---CccEEEEeccC-CChhhHHHHHHH
Q 013813 172 LLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIRVF-PNLQDTIKYAKM 247 (436)
Q Consensus 172 ~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~---~iPVsVKiRlg-~~~~d~~~~ak~ 247 (436)
..++-..++.|+|+||+.+ ++|+... .+.+-+.++++.+ ++|+-|=+-.+ .+.++....++.
T Consensus 91 ~~e~~~Av~~GAdEID~vi----------nig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~ri 156 (234)
T 1n7k_A 91 LVEAQTVLEAGATELDVVP----------HLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVDS 156 (234)
T ss_dssp HHHHHHHHHHTCCEEEECC----------CGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEec----------cchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHHH
Confidence 3444456788999999864 1343322 4444445555544 35653332222 245667778888
Q ss_pred HHHcCccEEEeccCcccccCCCCCccCHHHHHH--HHhhCCCcEEEccCCCCHHHHHHHHHhcCcc--eeeeehHHhh
Q 013813 248 LEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKA--VKNALRIPVLANGNVRHMEDVQKCLEETGCE--GVLSAESLLE 321 (436)
Q Consensus 248 le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~--ik~~~~iPVianGGI~s~eda~~~l~~tGaD--gVmIGRgal~ 321 (436)
+.++|+|+|-..- +..+ .+.+..+.++. +++.+++||.+.|||++.+++.++++. |++ |+..|+.++.
T Consensus 157 a~eaGADfVKTsT----G~~~-~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~a-Ga~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 157 SRRAGADIVKTST----GVYT-KGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGA-GADIIGTSSAVKVLE 228 (234)
T ss_dssp HHHTTCSEEESCC----SSSC-CCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHT-TCSEEEETTHHHHHH
T ss_pred HHHhCCCEEEeCC----CCCC-CCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHc-CccccchHHHHHHHH
Confidence 9999999994321 1110 03456666667 777777999999999999999999986 999 7777776654
No 195
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.09 E-value=2.5e-05 Score=78.66 Aligned_cols=129 Identities=11% Similarity=0.105 Sum_probs=99.8
Q ss_pred CEEEEecC-CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 159 PLFVQFCA-NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~g-~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
|+...++. .+++++.+.|+ .++.|++.|.++.| | +...+.++++++.+ ++++.+...-+
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~-~-----------------~~d~~~v~avr~a~~~~~l~vDan~~ 192 (369)
T 2zc8_A 131 EVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK-P-----------------GWDYEVLKAVREAFPEATLTADANSA 192 (369)
T ss_dssp EBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECB-T-----------------TBSHHHHHHHHHHCTTSCEEEECTTC
T ss_pred eceEEecCCCCHHHHHHHHHHHHHhhhheeeeecC-h-----------------hHHHHHHHHHHHHcCCCeEEEecCCC
Confidence 33344443 48888888775 45779999999863 1 22234456666554 67899998888
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.++ +++++.+++.|+.+|. ++ . .+.||+..+++++.+++||.+.+.+.+.++++++++...+|.|++
T Consensus 193 ~~~~~-~~~~~~l~~~~i~~iE------qP---~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 193 YSLAN-LAQLKRLDELRLDYIE------QP---L-AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp CCGGG-HHHHHGGGGGCCSCEE------CC---S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHH-HHHHHHHHhCCCcEEE------CC---C-CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 99899 9999999999999885 21 1 135788899999999999999999999999999999877999987
Q ss_pred e
Q 013813 316 A 316 (436)
Q Consensus 316 G 316 (436)
=
T Consensus 262 k 262 (369)
T 2zc8_A 262 K 262 (369)
T ss_dssp C
T ss_pred c
Confidence 4
No 196
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.09 E-value=3.1e-05 Score=74.59 Aligned_cols=145 Identities=14% Similarity=0.096 Sum_probs=97.7
Q ss_pred CCCEEEEecC-CCHHHHHHHHHHHcC--CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec
Q 013813 157 DRPLFVQFCA-NDPEILLNAARRVEP--YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR 233 (436)
Q Consensus 157 e~plivQL~g-~d~e~~~~AA~~v~~--g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR 233 (436)
+.++..+-.| .+.++...++++..+ |-+.|.|-.- .+. -.++-|+....+-.+.+.+. ++.|...+
T Consensus 63 ~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi-------~d~--~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~- 131 (268)
T 2htm_A 63 GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVI-------PDP--TYLLPDPLETLKAAERLIEE-DFLVLPYM- 131 (268)
T ss_dssp TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCC-------SCT--TTTCCCHHHHHHHHHHHHHT-TCEECCEE-
T ss_pred hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeec-------cCc--cccCcCHHHHHHHHHHHHHC-CCEEeecc-
Confidence 5667777666 678999999987654 4566555421 111 12666766665555555332 32222111
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHh-hCC-CcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALR-IPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~-~~~-iPVianGGI~s~eda~~~l~~tGaD 311 (436)
. ++ ..+++.+++.|++.|.--+..... +.|-.+.+.++.+++ ..+ +|||..|||.+++|+..+++. |||
T Consensus 132 -~---~D-~~~ak~l~~~G~~aVmPlg~pIGs---G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeL-GAd 202 (268)
T 2htm_A 132 -G---PD-LVLAKRLAALGTATVMPLAAPIGS---GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVMEL-GLD 202 (268)
T ss_dssp -C---SC-HHHHHHHHHHTCSCBEEBSSSTTT---CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHT-TCC
T ss_pred -C---CC-HHHHHHHHhcCCCEEEecCccCcC---CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHc-CCC
Confidence 1 22 267899999999998544432221 222346778999998 678 999999999999999999997 999
Q ss_pred eeeeehHHhh
Q 013813 312 GVLSAESLLE 321 (436)
Q Consensus 312 gVmIGRgal~ 321 (436)
||++|+++..
T Consensus 203 gVlVgSAI~~ 212 (268)
T 2htm_A 203 AVLVNTAIAE 212 (268)
T ss_dssp EEEESHHHHT
T ss_pred EEEEChHHhC
Confidence 9999999864
No 197
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.08 E-value=3.7e-05 Score=78.38 Aligned_cols=125 Identities=13% Similarity=0.011 Sum_probs=100.2
Q ss_pred HHHHHH-HHHcCCCcEEEEe-cCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCC-ChhhHHHHH
Q 013813 171 ILLNAA-RRVEPYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFP-NLQDTIKYA 245 (436)
Q Consensus 171 ~~~~AA-~~v~~g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~-~~~d~~~~a 245 (436)
++++.+ +.++.||..|-|+ .|-+ ..+++.-.+++++|++.+ ++++.|...-++ +.+++++++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~ 221 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTF 221 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHH
Confidence 455455 4567799999995 3311 135677788899999887 589999988899 899999999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
+.+++.|+++|. +... +.|++..+++++.+++||++.+.+.+.++++++++...+|.|++--+
T Consensus 222 ~~L~~~~i~~iE-------eP~~---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 284 (394)
T 3mqt_A 222 RQLEDIDLYFIE-------ACLQ---HDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYN 284 (394)
T ss_dssp HHTGGGCCSEEE-------SCSC---TTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTT
T ss_pred HHHhhcCCeEEE-------CCCC---cccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCcc
Confidence 999999999883 2111 34788999999999999999999999999999999888999987533
No 198
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.08 E-value=5.6e-05 Score=77.07 Aligned_cols=134 Identities=14% Similarity=0.081 Sum_probs=105.6
Q ss_pred CHHHHHHHH-HHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHH
Q 013813 168 DPEILLNAA-RRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA-~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~ 243 (436)
++++.++.+ +.. +.||..|-+..|++.. ......++...+.++++++.+ ++++.|....+++.+++++
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHH
Confidence 566555444 443 5699999999987641 222234667778899999887 5899999999999999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
+++.+++.|+.+|- +... +-|++..+++++.+++||.+...+.+..++.++++...+|.|++--+-
T Consensus 218 ~~~~l~~~~i~~iE-------eP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~ 283 (388)
T 3tcs_A 218 VGHMLQDHGFCHFE-------EPCP---YWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILY 283 (388)
T ss_dssp HHHHHHHTTCCEEE-------CCSC---TTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHH
T ss_pred HHHHHhhcCCeEEE-------CCCC---ccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccc
Confidence 99999999998872 2111 347899999999999999999999999999999998789999866433
No 199
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.06 E-value=5e-05 Score=77.47 Aligned_cols=134 Identities=11% Similarity=0.157 Sum_probs=108.8
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc---CccEEEEec
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~---~iPVsVKiR 233 (436)
.|+...+...+++++++.++ .++.|+..|.+.+|++ +++.-.+.++++++.+ ++++.|...
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 45556778889999988775 5677999999998863 2455566777777664 478999988
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+|+.+++..+++.+++.++ +| ++. ..+|+..+++++.+++||.+...+.+..++.++++...+|.|
T Consensus 219 ~~w~~~~A~~~~~~L~~~~i-~i-------EeP-----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v 285 (391)
T 4e8g_A 219 RSLPSRDALRLSRECPEIPF-VL-------EQP-----CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGF 285 (391)
T ss_dssp TCCCHHHHHHHHHHCTTSCE-EE-------ESC-----SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCe-EE-------ecC-----CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 89999999999999999988 76 221 247899999999999999999999999999999998789999
Q ss_pred eeehHH
Q 013813 314 LSAESL 319 (436)
Q Consensus 314 mIGRga 319 (436)
++--+-
T Consensus 286 ~ik~~~ 291 (391)
T 4e8g_A 286 GMKLTR 291 (391)
T ss_dssp EEEHHH
T ss_pred EeCccc
Confidence 886443
No 200
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.04 E-value=6e-05 Score=77.25 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=105.2
Q ss_pred CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhh---cCccc----ccccC---ChHHHHHHHHHHhccc--CccEEEEec
Q 013813 167 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR---RGNYG----AFLMD---NLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~---~~~~G----s~Ll~---~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.+++++++.++ .++.||..|-|..+.+..... +.+.| ...-. ..+...+++++|++.+ ++++.|+..
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 37888888875 457799999998732211000 00111 01111 1356678899999887 689999988
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
-+++.++++++++.+++.|+++|..- ..|++..+++++.+++||++.+.+.+.++++++++...+|.|
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~P------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 289 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEID------------SYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVA 289 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEECC------------CSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEeC------------cCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEE
Confidence 89999999999999999999998621 137888999999999999999999999999999998789999
Q ss_pred eee
Q 013813 314 LSA 316 (436)
Q Consensus 314 mIG 316 (436)
++-
T Consensus 290 ~~k 292 (409)
T 3go2_A 290 IVD 292 (409)
T ss_dssp EEC
T ss_pred EeC
Confidence 875
No 201
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.03 E-value=7e-06 Score=76.67 Aligned_cols=145 Identities=15% Similarity=0.111 Sum_probs=98.2
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhh---------hcCcccccccCChHHHHHHH---------
Q 013813 157 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIA---------RRGNYGAFLMDNLPLVKSLV--------- 217 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~---------~~~~~Gs~Ll~~p~~v~eIv--------- 217 (436)
+.|++.-+-+.+++++.+.++.+ +.|++.|++++-||.... ..-++|. ++ +.+.+...+
T Consensus 12 ~~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 12 ESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HHCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 36799999999999888888655 568999999998886421 1122344 22 334443333
Q ss_pred --------HHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCc
Q 013813 218 --------EKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIP 288 (436)
Q Consensus 218 --------~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iP 288 (436)
+..+. .++|+...+. +.. + +..+.+.|+|+|.+++- ...+ -.++++.++... ++|
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~G~~---t~~---e-~~~A~~~Gad~v~~fpa---~~~g-----G~~~lk~l~~~~~~ip 153 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLPGVL---TPT---E-VERALALGLSALKFFPA---EPFQ-----GVRVLRAYAEVFPEVR 153 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEEEEC---SHH---H-HHHHHHTTCCEEEETTT---TTTT-----HHHHHHHHHHHCTTCE
T ss_pred CCCCHHHHHHHHH-hCCCEEecCC---CHH---H-HHHHHHCCCCEEEEecC---cccc-----CHHHHHHHHhhCCCCc
Confidence 32222 3455554421 222 2 34456789999999751 1110 247788998877 899
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
|++.|||+ .+++.++++. |+++|.+|++++.
T Consensus 154 vvaiGGI~-~~n~~~~l~a-Ga~~vavgSai~~ 184 (207)
T 2yw3_A 154 FLPTGGIK-EEHLPHYAAL-PNLLAVGGSWLLQ 184 (207)
T ss_dssp EEEBSSCC-GGGHHHHHTC-SSBSCEEESGGGS
T ss_pred EEEeCCCC-HHHHHHHHhC-CCcEEEEehhhhC
Confidence 99999997 6999999985 9999999998876
No 202
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.02 E-value=0.00011 Score=74.50 Aligned_cols=140 Identities=11% Similarity=0.092 Sum_probs=107.0
Q ss_pred CCEEEEecCCCHHHHH-HHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 158 RPLFVQFCANDPEILL-NAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~-~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.|+...+...+++++. ++++.++ .|+..|-+..|+. +++.-.+.++++++.+ ++++.|...
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 3444556566776654 4556666 4899999998752 3455677788888887 478999988
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.+++.++++.+++.|+.+| ++.. .+.||+..+++++.+++||.+...+.+..++.++++..++|.|
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v 271 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLI-------EQPV---SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAY 271 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEE-------ECCB---CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCccce-------eCCC---CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEE
Confidence 89999999999999999999887 2211 1357999999999999999999999999999999998889999
Q ss_pred eeehHHhhC
Q 013813 314 LSAESLLEN 322 (436)
Q Consensus 314 mIGRgal~n 322 (436)
++--+-.+.
T Consensus 272 ~~k~~~~GG 280 (381)
T 3fcp_A 272 ALKIAKAGG 280 (381)
T ss_dssp EECHHHHTS
T ss_pred EecccccCC
Confidence 986554443
No 203
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.02 E-value=7.7e-05 Score=75.75 Aligned_cols=137 Identities=12% Similarity=0.165 Sum_probs=106.6
Q ss_pred CCEEEEecCCCHHH-HHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEec
Q 013813 158 RPLFVQFCANDPEI-LLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~-~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiR 233 (436)
.|+...+...++++ +.++++.++ .||..|-|..|+. +++.-.+.++++++.+ ++++.|...
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 34444555556665 455556676 5899999998652 2455567788888876 478999988
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
.+++.+++.++++.+++.|+.+|- +. . .+.||+..+++++.+++||.+...+.+.+++.++++...+|.|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v 272 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIE-------QP--I-SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVF 272 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEE-------CC--B-CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCcCeee-------CC--C-CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 899999999999999999998873 21 1 1357999999999999999999999999999999998889999
Q ss_pred eeehHH
Q 013813 314 LSAESL 319 (436)
Q Consensus 314 mIGRga 319 (436)
++--+-
T Consensus 273 ~~k~~~ 278 (382)
T 3dgb_A 273 ALKIAK 278 (382)
T ss_dssp EECHHH
T ss_pred Eecccc
Confidence 876443
No 204
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.01 E-value=8.3e-06 Score=75.25 Aligned_cols=76 Identities=17% Similarity=0.346 Sum_probs=59.5
Q ss_pred HHHHHcCccEEEeccCccc-ccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 246 KMLEDAGCSLLAVHGRTRD-EKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~-~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
..+.+.|+|+|.+++.... ...+ ....+|+.++++++..++||++.|||+ ++++.++++ .|+|+|++|++++..|+
T Consensus 122 ~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i~~~~d 198 (215)
T 1xi3_A 122 LEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVLK-TGVDGIAVISAVMGAED 198 (215)
T ss_dssp HHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHHT-TTCSEEEESHHHHTSSS
T ss_pred HHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHHH-cCCCEEEEhHHHhCCCC
Confidence 4466789999998653221 1111 125679999999988899999999999 999999887 59999999999998764
No 205
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.00 E-value=4.5e-05 Score=77.98 Aligned_cols=135 Identities=9% Similarity=0.034 Sum_probs=104.4
Q ss_pred CCEEEEec-CCC--HHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEE
Q 013813 158 RPLFVQFC-AND--PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 231 (436)
Q Consensus 158 ~plivQL~-g~d--~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVK 231 (436)
.|+...+. +.+ ++++++.++ .++.|+..|.|+++ | ..+ .+.+++|++.+ ++++.|.
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-------------~~d----~~~v~avR~a~G~~~~L~vD 211 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-------------GWD----VEPLQETRRAVGDHFPLWTD 211 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-------------TBS----HHHHHHHHHHHCTTSCEEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-------------chH----HHHHHHHHHhcCCCCEEEEe
Confidence 34555554 335 899888775 45679999999973 1 123 45566666665 5789999
Q ss_pred eccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 232 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 232 iRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
...+++.++ +++++.+++.|+.+|- +. . .+.|++..+++++.+++||.+...+.+.+++.++++...+|
T Consensus 212 aN~~w~~~~-~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d 280 (400)
T 3mwc_A 212 ANSSFELDQ-WETFKAMDAAKCLFHE-------QP--L-HYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISN 280 (400)
T ss_dssp CTTCCCGGG-HHHHHHHGGGCCSCEE-------SC--S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHH-HHHHHHHHhcCCCEEe-------CC--C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCC
Confidence 988999888 8999999999998873 21 1 13478999999999999999999999999999999988899
Q ss_pred eeeeehHHhh
Q 013813 312 GVLSAESLLE 321 (436)
Q Consensus 312 gVmIGRgal~ 321 (436)
.|++--+-.+
T Consensus 281 ~v~~k~~~~G 290 (400)
T 3mwc_A 281 IWNIKIQRVG 290 (400)
T ss_dssp EEEECHHHHT
T ss_pred EEEEcchhhC
Confidence 9988654443
No 206
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.96 E-value=7.6e-05 Score=76.14 Aligned_cols=123 Identities=7% Similarity=-0.084 Sum_probs=99.1
Q ss_pred HHHHHH-HHHcCCCcEEEEe-cCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCC-ChhhHHHHH
Q 013813 171 ILLNAA-RRVEPYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFP-NLQDTIKYA 245 (436)
Q Consensus 171 ~~~~AA-~~v~~g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~-~~~d~~~~a 245 (436)
++++.+ +.++.||..|-|+ .|.+ ..+++.-.+++++|++.+ ++++.|...-++ +.+++++++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~ 226 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLL 226 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHH
Confidence 455455 4567799999994 3311 135677788899999887 589999988899 899999999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+.+++.|+++|. +.. .+.|++..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 227 ~~L~~~~i~~iE-------eP~---~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 227 NSIEDLELYFAE-------ATL---QHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp HHTGGGCCSEEE-------SCS---CTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHhhhcCCeEEE-------CCC---CchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecC
Confidence 999999999883 111 1347889999999999999999999999999999998789999864
No 207
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.96 E-value=0.00013 Score=70.14 Aligned_cols=144 Identities=13% Similarity=0.165 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc------------
Q 013813 167 NDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV------------ 234 (436)
Q Consensus 167 ~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl------------ 234 (436)
.||.+++ +..+.|+++|-+-.- ...|||++ +-+..+++.+++||-.|==+
T Consensus 64 ~dp~~iA---~~~~~GA~aiSVLTd-------~~~F~Gs~--------~~L~~vr~~v~lPvLrKDFiid~yQI~eAr~~ 125 (258)
T 4a29_A 64 RDPIEYA---KFMERYAVGLSITTE-------EKYFNGSY--------ETLRKIASSVSIPILMSDFIVKESQIDDAYNL 125 (258)
T ss_dssp CCHHHHH---HHHTTTCSEEEEECC-------STTTCCCH--------HHHHHHHTTCSSCEEEESCCCSHHHHHHHHHH
T ss_pred CCHHHHH---HHHhCCCeEEEEeCC-------CCCCCCCH--------HHHHHHHHhcCCCEeeccccccHHHHHHHHHc
Confidence 3665544 455678898877632 22355554 23566788889999888210
Q ss_pred C----------CChhhHHHHHHHHHHcCccEE-EeccCcc--------------cccCCCCCccCHHHHHHHHhhC--CC
Q 013813 235 F----------PNLQDTIKYAKMLEDAGCSLL-AVHGRTR--------------DEKDGKKFRADWNAIKAVKNAL--RI 287 (436)
Q Consensus 235 g----------~~~~d~~~~ak~le~aG~d~I-~VHgRt~--------------~~~~~~~g~ad~~~i~~ik~~~--~i 287 (436)
| .+.++..++.+.+.+.|.+.+ -||...- ..+.-.+...|++...++.+.+ ++
T Consensus 126 GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~~ 205 (258)
T 4a29_A 126 GADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSNV 205 (258)
T ss_dssp TCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTTS
T ss_pred CCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCCC
Confidence 1 111233344444444444333 2332110 0011122357888888888875 68
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchhh
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
.+|+-+||.|++|+.++.+. |+|+|.||.+++.+|+-.+++
T Consensus 206 ~~VsESGI~t~~dv~~l~~~-G~~a~LVGealmr~~d~~~~L 246 (258)
T 4a29_A 206 VKVAKLGISERNEIEELRKL-GVNAFLISSSLMRNPEKIKEL 246 (258)
T ss_dssp EEEEEESSCCHHHHHHHHHT-TCCEEEECHHHHHCTTHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHC-CCCEEEECHHHhCCCcHHHHH
Confidence 89999999999999998875 999999999999999854443
No 208
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.96 E-value=2.9e-05 Score=79.03 Aligned_cols=125 Identities=10% Similarity=-0.023 Sum_probs=98.9
Q ss_pred HHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccc--cCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 170 EILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFL--MDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 170 e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~L--l~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++.++|+ .++.||+.|.++.|-. |+ .+ .++.+...++++++++.+ ++++.+...-+++.++++++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~--------~~-~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~ 220 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRG--------GR-HMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEV 220 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHH--------HH-TSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcC--------cc-cCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 88877775 4577999999987621 11 11 124567778888988876 58888888778999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh-----CCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~-----~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.+++.|+++|- + ... .|++..+++++. +++||++.+ +.+.++++++++...+|.|++
T Consensus 221 ~~~l~~~~i~~iE-------~--P~~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 221 LAALSDVNLYWLE-------E--AFH--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHTTTSCEEEEE-------C--SSS--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHhcCCCEEe-------c--CCc--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEe
Confidence 9999999988763 1 121 478889999998 899999999 999999999999877999876
No 209
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.94 E-value=2.3e-05 Score=73.08 Aligned_cols=75 Identities=17% Similarity=0.353 Sum_probs=58.1
Q ss_pred HHHHHHcCccEEEec----cCcccccCCCCCccCHHHHHHHHhhCC-CcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 245 AKMLEDAGCSLLAVH----GRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 245 ak~le~aG~d~I~VH----gRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
++.+.+.|+|+|.+. ..+.. +...+.+|+.++++++.++ +||++.|||. ++++.++++ .|+|+|.+|+++
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~~---~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i 203 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETKK---DTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVIQ-AGADGVSMISAI 203 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSSS---SCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHHH-TTCSEEEESHHH
T ss_pred HHHHHhCCCCEEEECCCcCCCCCC---CCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHHH-cCCCEEEEhHHh
Confidence 455668899999862 22221 1112467999999998887 9999999999 999999887 499999999999
Q ss_pred hhCCc
Q 013813 320 LENPA 324 (436)
Q Consensus 320 l~nP~ 324 (436)
+..++
T Consensus 204 ~~~~d 208 (227)
T 2tps_A 204 SQAED 208 (227)
T ss_dssp HTSSC
T ss_pred hcCCC
Confidence 87544
No 210
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.94 E-value=6.9e-05 Score=71.02 Aligned_cols=146 Identities=18% Similarity=0.263 Sum_probs=98.4
Q ss_pred CEEEEecCCCHHHHHHHHHHHc-CCCcE--EEEecC--CCchhhhcCcccccccCChHHHHHHHHHHhcc--cCccEEEE
Q 013813 159 PLFVQFCANDPEILLNAARRVE-PYCDY--VDINLG--CPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNVPVSCK 231 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~~v~-~g~D~--IdLN~G--CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~iPVsVK 231 (436)
.+..+|...|...+.++.+.++ .|+|. +|+--| .|+- .+| + ++++++++. .++|+.|+
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~-----~~G------~----~~v~~ir~~~~~~~~~dvh 70 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNI-----TFG------H----PVVESLRKQLGQDPFFDMH 70 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCB-----CBC------H----HHHHHHHHHHCSSSCEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccc-----ccC------H----HHHHHHHHhhCCCCcEEEE
Confidence 3668899999999999998775 47875 444433 2331 133 2 356666666 47888887
Q ss_pred eccCCChhhHHHHHHHHHHcCccEEEeccCccc--------------------------c-----------------cCC
Q 013813 232 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------------------E-----------------KDG 268 (436)
Q Consensus 232 iRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~--------------------------~-----------------~~~ 268 (436)
+=.. +..++++.+.++|+|.|++|+-... . ..+
T Consensus 71 Lmv~----~p~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pG 146 (228)
T 3ovp_A 71 MMVS----KPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPG 146 (228)
T ss_dssp EECS----CGGGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTT
T ss_pred EEeC----CHHHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCC
Confidence 5442 2234566777899999999752110 0 011
Q ss_pred CCC----ccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 269 KKF----RADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 269 ~~g----~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+.| +..++.++++++.. +++|.+.|||+ ++.+.++.+. |||.+++||++...++.
T Consensus 147 f~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~~a-GAd~~VvGsaIf~a~dp 206 (228)
T 3ovp_A 147 FGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCAEA-GANMIVSGSAIMRSEDP 206 (228)
T ss_dssp TCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHHHH-TCCEEEESHHHHTCSCH
T ss_pred CCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHHHc-CCCEEEEeHHHhCCCCH
Confidence 222 22456677787765 68999999995 7999999886 99999999998876654
No 211
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.91 E-value=2.3e-05 Score=75.19 Aligned_cols=146 Identities=13% Similarity=0.160 Sum_probs=100.5
Q ss_pred CEEEEecCCCHHHHHHHHHHHc-CCCcE--EEEecC--CCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEe
Q 013813 159 PLFVQFCANDPEILLNAARRVE-PYCDY--VDINLG--CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKI 232 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~~v~-~g~D~--IdLN~G--CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKi 232 (436)
.+..+|...|...+.++.+.++ .|+|. ||+--| .|+- .+| ..+++++++.+ ++|+.|.+
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni-----t~G----------~~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL-----TFG----------PMVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-----CCC----------HHHHHHHHHHTCCSCEEEEE
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch-----hcC----------HHHHHHHHHhCCCCeEEEEE
Confidence 4779999999999999998876 47875 444433 2331 133 25677777777 78998886
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCccc--------------------------c-----------------cCCC
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------------------E-----------------KDGK 269 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~--------------------------~-----------------~~~~ 269 (436)
-+ .++.++++.+.++|+|.|++|.-... . ..++
T Consensus 94 mv----~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGf 169 (246)
T 3inp_A 94 MV----KPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF 169 (246)
T ss_dssp EC----SSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC
T ss_pred ee----CCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCC
Confidence 54 23345677888999999999752110 0 0111
Q ss_pred CC----ccCHHHHHHHHhh-----CCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 270 KF----RADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 270 ~g----~ad~~~i~~ik~~-----~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
.| +..++.|+++++. .+++|.+-|||+ .+.+.++.+. |||.+++|+++...++.
T Consensus 170 gGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~a-GAD~~V~GSaIf~a~dp 232 (246)
T 3inp_A 170 GGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVC-GVNAFVAGSAIFNSDSY 232 (246)
T ss_dssp --CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTT-TCCEEEESHHHHTSSCH
T ss_pred CCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHc-CCCEEEEehHHhCCCCH
Confidence 12 2345667777664 358999999999 6889998876 99999999998876553
No 212
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.90 E-value=5.9e-05 Score=74.21 Aligned_cols=143 Identities=11% Similarity=0.197 Sum_probs=88.7
Q ss_pred CCCEEEEecCCCH--------HHHHHHHHHHcCCCcEEEEe--cCCCchhhhcCcccccccCChHHHHHHHHHHhcccCc
Q 013813 157 DRPLFVQFCANDP--------EILLNAARRVEPYCDYVDIN--LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV 226 (436)
Q Consensus 157 e~plivQL~g~d~--------e~~~~AA~~v~~g~D~IdLN--~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i 226 (436)
+.|+|+.+-++.. ..+..+...++.|+|+|++. .|.+. +. ...+.+.++++++.+ .++
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i~~Gs~~-------~~----~~l~~i~~v~~~a~~-~Gl 172 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEY-------EH----QSIKNIIQLVDAGMK-VGM 172 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEECTTSTT-------HH----HHHHHHHHHHHHHHT-TTC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEEECCCCc-------HH----HHHHHHHHHHHHHHH-cCC
Confidence 5678888876541 11123344567899998876 33111 00 112334455555543 368
Q ss_pred cEEEEeccC----CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCC-CHHH-
Q 013813 227 PVSCKIRVF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVR-HMED- 300 (436)
Q Consensus 227 PVsVKiRlg----~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~-s~ed- 300 (436)
|+.+=.-.| .+.+.....++.+.++|+|+|-+.. + + +.++++.+...+||++.||+. +.++
T Consensus 173 pvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~-t--------~----e~~~~vv~~~~vPVv~~GG~~~~~~~~ 239 (295)
T 3glc_A 173 PTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY-V--------E----KGFERIVAGCPVPIVIAGGKKLPEREA 239 (295)
T ss_dssp CEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEEC-C--------T----TTHHHHHHTCSSCEEEECCSCCCHHHH
T ss_pred EEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC-C--------H----HHHHHHHHhCCCcEEEEECCCCCHHHH
Confidence 887733222 2322234578888999999986641 1 1 125677777889999999998 4444
Q ss_pred ---HHHHHHhcCcceeeeehHHhhCCcc
Q 013813 301 ---VQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 301 ---a~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+.++++. |++||.+||.++..|.-
T Consensus 240 l~~v~~ai~a-GA~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 240 LEMCWQAIDQ-GASGVDMGRNIFQSDHP 266 (295)
T ss_dssp HHHHHHHHHT-TCSEEEESHHHHTSSSH
T ss_pred HHHHHHHHHh-CCeEEEeHHHHhcCcCH
Confidence 4445565 99999999999987653
No 213
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.86 E-value=0.00023 Score=67.45 Aligned_cols=125 Identities=12% Similarity=0.141 Sum_probs=86.2
Q ss_pred HHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEe--ccC-CChhhHHHHHHH
Q 013813 171 ILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKI--RVF-PNLQDTIKYAKM 247 (436)
Q Consensus 171 ~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKi--Rlg-~~~~d~~~~ak~ 247 (436)
...++.. ++.|+|.||+-+ ++|...-.+.+.+.+-+.++++.++- ..+|+ -.+ .+.++....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHH
Confidence 3455557 889999999875 25666667888888888888887742 24552 221 345677788899
Q ss_pred HHHcCccEEEec-cCcc---cccCCCCCccCHHHHHHHHhh---CC--CcEEEccCCCCHHHHHHHHHh
Q 013813 248 LEDAGCSLLAVH-GRTR---DEKDGKKFRADWNAIKAVKNA---LR--IPVLANGNVRHMEDVQKCLEE 307 (436)
Q Consensus 248 le~aG~d~I~VH-gRt~---~~~~~~~g~ad~~~i~~ik~~---~~--iPVianGGI~s~eda~~~l~~ 307 (436)
+.++|+|+|-.. |-.. ....+.++.+..+.++.+++. ++ ++|-++|||+|.+++.++++.
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~a 205 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVDA 205 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHH
Confidence 999999999443 3220 000111234556666666655 54 999999999999999999985
No 214
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=97.84 E-value=0.0002 Score=73.53 Aligned_cols=150 Identities=9% Similarity=0.084 Sum_probs=113.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhh-----cCcccccccC---ChHHHHHHHHHHhccc--
Q 013813 156 EDRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIAR-----RGNYGAFLMD---NLPLVKSLVEKLALNL-- 224 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~-----~~~~Gs~Ll~---~p~~v~eIv~av~~~~-- 224 (436)
+..|+...+.+.+++++.+.++ .++.|+..+-+..|.+..... ...+...... +++...+.++++++.+
T Consensus 141 ~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~ 220 (421)
T 4hnl_A 141 TAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGN 220 (421)
T ss_dssp SCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCC
Confidence 3457777788889999888775 567799999999987542111 1112222222 3455667788888887
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHH
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~ 304 (436)
++.+.+...-+++.++++++++.+++.++.+| ++.. .+-|++..+++++.+++||.+.-.+.+..+++++
T Consensus 221 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i-------EeP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 290 (421)
T 4hnl_A 221 QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFL-------EDIL---PPDQSHWLTQLRSQSATPIATGELFNNPMEWQEL 290 (421)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE-------ECCS---CGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHH
T ss_pred CceEeccccccCCHHHHHHHHHHhhhhhhccc-------ccCC---cccchHHHHHHHhcCCCCeecCcceehhHHHHHH
Confidence 57788887778999999999999999999887 2211 1357888999999999999999999999999999
Q ss_pred HHhcCcceeee
Q 013813 305 LEETGCEGVLS 315 (436)
Q Consensus 305 l~~tGaDgVmI 315 (436)
++...+|.|++
T Consensus 291 i~~~a~d~v~~ 301 (421)
T 4hnl_A 291 VKNRQIDFMRA 301 (421)
T ss_dssp HHTTCCSEECC
T ss_pred HhcCCceEEEe
Confidence 99878898875
No 215
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.82 E-value=4e-05 Score=73.41 Aligned_cols=80 Identities=11% Similarity=0.158 Sum_probs=60.0
Q ss_pred HHHHHHcCccEEEeccCcccc-cCCCCCccCHHHHHHHHhh--CCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 245 AKMLEDAGCSLLAVHGRTRDE-KDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~-~~~~~g~ad~~~i~~ik~~--~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
++.+.+.|+|+|.+....... +.+. .+..++.++++++. .++||++.||| +.+++.++++. |+|+|.+|++++.
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~-~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~a-Ga~gvav~sai~~ 224 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGR-AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDA-GARRIVVVRAITS 224 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHT-TCCCEEESHHHHT
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCc-chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHc-CCCEEEEeHHHhC
Confidence 445667999999986543221 1111 24678999999886 58999999999 89999999985 9999999999988
Q ss_pred CCccch
Q 013813 322 NPALFA 327 (436)
Q Consensus 322 nP~lf~ 327 (436)
.++...
T Consensus 225 a~dp~~ 230 (243)
T 3o63_A 225 ADDPRA 230 (243)
T ss_dssp CSSHHH
T ss_pred CCCHHH
Confidence 766543
No 216
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.82 E-value=4e-05 Score=74.52 Aligned_cols=158 Identities=22% Similarity=0.239 Sum_probs=89.6
Q ss_pred CCCCEEEEecCCCHH-HHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEE
Q 013813 156 EDRPLFVQFCANDPE-ILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCK 231 (436)
Q Consensus 156 ~e~plivQL~g~d~e-~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVK 231 (436)
.+.|++.|+.+.||- .+....+.+ +.||.+| +|+ |..--..|.|...|..+.--..++++.|+.+- ++--.+-
T Consensus 93 ~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~ 169 (286)
T 2p10_A 93 RHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPY 169 (286)
T ss_dssp SSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCE
T ss_pred CCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 478999999999874 222333444 4599999 997 43222233444444443323333444433322 2211111
Q ss_pred eccCCChhhHHHHHHHHHHcCccEEEeccC-cccccCCCCCc---cC-HHHHHHHHhh-----CCCcEEEcc-CCCCHHH
Q 013813 232 IRVFPNLQDTIKYAKMLEDAGCSLLAVHGR-TRDEKDGKKFR---AD-WNAIKAVKNA-----LRIPVLANG-NVRHMED 300 (436)
Q Consensus 232 iRlg~~~~d~~~~ak~le~aG~d~I~VHgR-t~~~~~~~~g~---ad-~~~i~~ik~~-----~~iPVianG-GI~s~ed 300 (436)
. .+.+ -++.+.++|+|.|.+|.. |..+.-+.... .+ -+.+.++.+. .++.|+.-| +|.+++|
T Consensus 170 v---~~~e----eA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeD 242 (286)
T 2p10_A 170 V---FSPE----DAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPED 242 (286)
T ss_dssp E---CSHH----HHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHH
T ss_pred c---CCHH----HHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHH
Confidence 0 1223 356677899999999965 33221111111 12 2344444332 256666554 9999999
Q ss_pred HHHHHHhc-CcceeeeehHHhhCC
Q 013813 301 VQKCLEET-GCEGVLSAESLLENP 323 (436)
Q Consensus 301 a~~~l~~t-GaDgVmIGRgal~nP 323 (436)
++.+++.+ |++|+..++++..=|
T Consensus 243 v~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 243 ARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHHCTTCCEEEESHHHHHHH
T ss_pred HHHHHhcCCCccEEEeehhhhcCC
Confidence 99999865 599999999987665
No 217
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=97.81 E-value=0.00035 Score=72.37 Aligned_cols=125 Identities=8% Similarity=0.051 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
|.+++++++.++ .++.||..|-|+.|+ +++.-.+.++++++.+ ++++.|...-+++..+++
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~ 262 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAV 262 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 568999988775 567799999999875 3455566778888876 578999988899999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh---CCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA---LRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~---~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++.+++.|+.+| ++... +-|++..+++++. +++||.+.-.+.+..++.++++...+|.|++-
T Consensus 263 ~~~~~L~~~~~~~i-------EeP~~---~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d 329 (441)
T 4a35_A 263 EWMSKLAKFKPLWI-------EEPTS---PDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQID 329 (441)
T ss_dssp HHHHHHGGGCCSEE-------ECCSC---TTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHhhcccCccEE-------eCCCC---cccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEEC
Confidence 99999999998887 22111 3578888899887 78999999999999999999998889998864
No 218
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.80 E-value=7.3e-05 Score=73.02 Aligned_cols=120 Identities=16% Similarity=0.163 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCCCcEEEEecCCCchhhhcCccccccc---CChHHHHHHHHHHhcccCccEEEEecc--C-CChhh-HHH
Q 013813 171 ILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLM---DNLPLVKSLVEKLALNLNVPVSCKIRV--F-PNLQD-TIK 243 (436)
Q Consensus 171 ~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll---~~p~~v~eIv~av~~~~~iPVsVKiRl--g-~~~~d-~~~ 243 (436)
...++...++.|+|.||+=+ ++|..+. .+.+.+.+-++++++.++ +..+|+=+ + .+.++ ...
T Consensus 102 K~~Ea~~Av~~GAdEIDmVi----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~ 170 (297)
T 4eiv_A 102 VSLEAVGALKDGADEIECLI----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISR 170 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeee----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHH
Confidence 44466677889999999753 2565555 578889988888888874 44566533 2 22234 567
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC------------------------CCcEEEc-cCCCCH
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL------------------------RIPVLAN-GNVRHM 298 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~------------------------~iPVian-GGI~s~ 298 (436)
.++.+.++|+|+|-- ..++ .++.+..+.++.+++.+ ++-|=++ |||+|.
T Consensus 171 A~~ia~~AGADFVKT----STGf--~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~ 244 (297)
T 4eiv_A 171 AAVAALEGGADFLQT----SSGL--GATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMA 244 (297)
T ss_dssp HHHHHHHHTCSEEEC----CCSS--SSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHH
T ss_pred HHHHHHHhCCCEEEc----CCCC--CCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCH
Confidence 788889999999933 2221 11245555555544433 4789999 999999
Q ss_pred HHHHHHHHh
Q 013813 299 EDVQKCLEE 307 (436)
Q Consensus 299 eda~~~l~~ 307 (436)
+|+.++++.
T Consensus 245 e~A~~~i~~ 253 (297)
T 4eiv_A 245 ETADFLMQM 253 (297)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 219
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.80 E-value=0.00012 Score=70.79 Aligned_cols=120 Identities=20% Similarity=0.195 Sum_probs=83.1
Q ss_pred HHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccC-ccEEEEeccC---CChhh-HHHHH
Q 013813 171 ILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN-VPVSCKIRVF---PNLQD-TIKYA 245 (436)
Q Consensus 171 ~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~-iPVsVKiRlg---~~~~d-~~~~a 245 (436)
...++...++.|+|.||+-+ ++|..+-.+.+.+.+-+.++++.++ -+..+|+=+- .+.++ ....+
T Consensus 87 Kv~E~~~Av~~GAdEIDmVi----------nig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~ 156 (260)
T 1p1x_A 87 ALAETRAAIAYGADEVDVVF----------PYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKAS 156 (260)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEec----------cHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHH
Confidence 33455566788999999875 2565566678888888888887763 1334454331 12244 56788
Q ss_pred HHHHHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhh-------CCCcEEEccCCCCHHHHHHHHHh
Q 013813 246 KMLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNA-------LRIPVLANGNVRHMEDVQKCLEE 307 (436)
Q Consensus 246 k~le~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~-------~~iPVianGGI~s~eda~~~l~~ 307 (436)
+.+.++|+|+|-.. |-. ++.+..+.++.+++. .+++|-++|||+|.+++.++++.
T Consensus 157 ~ia~eaGADfVKTSTGf~-------~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~a 219 (260)
T 1p1x_A 157 EISIKAGADFIKTSTGKV-------AVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI 219 (260)
T ss_dssp HHHHHTTCSEEECCCSCS-------SCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCCCC-------CCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHh
Confidence 88999999999432 211 135667766666555 36999999999999999999986
No 220
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.78 E-value=0.00018 Score=70.26 Aligned_cols=119 Identities=13% Similarity=0.224 Sum_probs=80.7
Q ss_pred HHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChH---HHHHHHHHHhcccCccEEEEeccC---CChhh-HHH
Q 013813 171 ILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLP---LVKSLVEKLALNLNVPVSCKIRVF---PNLQD-TIK 243 (436)
Q Consensus 171 ~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~---~v~eIv~av~~~~~iPVsVKiRlg---~~~~d-~~~ 243 (436)
...++...++.|+|+||+-+ ++|..+..+.+ .+.+-+.++++.++ ...+|+=+. .+.++ ...
T Consensus 108 Kv~E~~~Av~~GAdEIDmVi----------nig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~ 176 (281)
T 2a4a_A 108 VLNDTEKALDDGADEIDLVI----------NYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIK 176 (281)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----------CHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEec----------chHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHH
Confidence 34455566788999999875 25555556677 88888899988874 234554332 12234 557
Q ss_pred HHHHHHHcCccEEEec-cCcccccCCCCCccCHHHHHHHHhh------------CCCcEEEccCCCCHHHHHHHHHh
Q 013813 244 YAKMLEDAGCSLLAVH-GRTRDEKDGKKFRADWNAIKAVKNA------------LRIPVLANGNVRHMEDVQKCLEE 307 (436)
Q Consensus 244 ~ak~le~aG~d~I~VH-gRt~~~~~~~~g~ad~~~i~~ik~~------------~~iPVianGGI~s~eda~~~l~~ 307 (436)
.++.+.++|+|+|-.. |-. ++.+..+.++.+++. .+++|-++|||+|.+|+.++++.
T Consensus 177 A~~ia~eaGADfVKTSTGf~-------~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~a 246 (281)
T 2a4a_A 177 TTLAVLNGNADFIKTSTGKV-------QINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILL 246 (281)
T ss_dssp HHHHHHTTTCSEEECCCSCS-------SCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCCCCC-------CCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHH
Confidence 7888999999999432 221 123444444444433 36999999999999999999986
No 221
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.78 E-value=7.3e-05 Score=71.15 Aligned_cols=83 Identities=11% Similarity=0.136 Sum_probs=64.0
Q ss_pred hhhHHHHHHHH-HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 238 LQDTIKYAKML-EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 238 ~~d~~~~ak~l-e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
.+++...|... +=.|..+|-+-+ ... ..+.++++++++.+ ++||+..|||+++++++++++ |||+|++
T Consensus 144 ~e~iaa~A~~a~~~~g~~~vY~e~-sG~-------~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~--gAD~VVV 213 (235)
T 3w01_A 144 TEDLEAYAQMVNHMYRLPVMYIEY-SGI-------YGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA--IADTIIV 213 (235)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEC-TTS-------CCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT--TSSEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEec-CCC-------cCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc--CCCEEEE
Confidence 34455555533 235777776654 321 12689999999998 999999999999999998775 8999999
Q ss_pred ehHHhhCCccchhhh
Q 013813 316 AESLLENPALFAGFR 330 (436)
Q Consensus 316 GRgal~nP~lf~~i~ 330 (436)
|.++..||..+.++.
T Consensus 214 GSai~~~~~~~~e~v 228 (235)
T 3w01_A 214 GDIIYKDIKKALKTV 228 (235)
T ss_dssp CTHHHHCHHHHHHTT
T ss_pred CCceecCHHHHHHHH
Confidence 999999999888764
No 222
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.77 E-value=0.00036 Score=67.07 Aligned_cols=142 Identities=12% Similarity=0.100 Sum_probs=107.3
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
-+.|++-+=|.-++-++.+ ..+.|+|+|=|+..+ + +.+.+.++++..++ .|+.+.|-+.
T Consensus 100 v~lPvLrKDfi~~~~qi~e---a~~~GAD~ilLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvEv~-- 158 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQVKL---ASSVGADAILIIARI--------------L-TAEQIKEIYEAAEE-LGMDSLVEVH-- 158 (251)
T ss_dssp CCSCEEEECCCCSTHHHHH---HHHTTCSEEEEEGGG--------------S-CHHHHHHHHHHHHT-TTCEEEEEEC--
T ss_pred CCCCEEEeeCCCCHHHHHH---HHHcCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-cCCeEEEEeC--
Confidence 4689999988877765444 446799999999542 1 23678888887765 5888877753
Q ss_pred CChhhHHHHHHHHHHc-CccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 236 PNLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 236 ~~~~d~~~~ak~le~a-G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
+.++ ++.+.++ |++.|-++.|.-.. . ..|++...++.+.+ ++++|+-|||.|++|+.++.+. +|+
T Consensus 159 -~~eE----~~~A~~l~g~~iIGinnr~l~t---~--~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~a 226 (251)
T 1i4n_A 159 -SRED----LEKVFSVIRPKIIGINTRDLDT---F--EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK--VNA 226 (251)
T ss_dssp -SHHH----HHHHHTTCCCSEEEEECBCTTT---C--CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT--CSE
T ss_pred -CHHH----HHHHHhcCCCCEEEEeCccccc---C--CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh--CCE
Confidence 2232 4556678 99999999986432 2 56788888887776 6899999999999999999874 999
Q ss_pred eeeehHHhhCCccchhhh
Q 013813 313 VLSAESLLENPALFAGFR 330 (436)
Q Consensus 313 VmIGRgal~nP~lf~~i~ 330 (436)
|.||++++..++.-..++
T Consensus 227 vLVG~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 227 VLVGTSIMKAENPRRFLE 244 (251)
T ss_dssp EEECHHHHHCSSHHHHHH
T ss_pred EEEcHHHcCCcCHHHHHH
Confidence 999999999887665443
No 223
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.77 E-value=7.6e-05 Score=70.91 Aligned_cols=144 Identities=16% Similarity=0.260 Sum_probs=97.8
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCcE--EEEecCC--CchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 160 LFVQFCANDPEILLNAARRVEPYCDY--VDINLGC--PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~~g~D~--IdLN~GC--P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
+..+|...|...+.++.+.++.|+|. ||+--|. |+ . .+| ..+++++++.++.|+.|-+=..
T Consensus 3 i~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fvpn--~---t~G----------~~~v~~lr~~~~~~~dvhLmv~ 67 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPN--L---TLS----------PFFVSQVKKLATKPLDCHLMVT 67 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSSSC--C---CBC----------HHHHHHHHTTCCSCEEEEEESS
T ss_pred EEeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccCcc--c---hhc----------HHHHHHHHhccCCcEEEEEEec
Confidence 56788888999999999888778887 5554454 43 1 123 3477788887777777765442
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCc-ccc--------------------------c-----------------CCCCC
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRT-RDE--------------------------K-----------------DGKKF 271 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt-~~~--------------------------~-----------------~~~~g 271 (436)
+ +..+++.+.++|+|.|++|.-. ... . .++.|
T Consensus 68 -d---p~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfgg 143 (231)
T 3ctl_A 68 -R---PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAG 143 (231)
T ss_dssp -C---GGGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSS
T ss_pred -C---HHHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCC
Confidence 2 2335677778888888887544 100 0 01111
Q ss_pred ----ccCHHHHHHHHhhC-----CCcEEEccCCCCHHHHHHHHHhcCcceeeee-hHHhhCCc
Q 013813 272 ----RADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKCLEETGCEGVLSA-ESLLENPA 324 (436)
Q Consensus 272 ----~ad~~~i~~ik~~~-----~iPVianGGI~s~eda~~~l~~tGaDgVmIG-Rgal~nP~ 324 (436)
+..++.++++++.. +++|.+-|||+ .+.+.++.+. |||.+.+| ++++..++
T Consensus 144 Q~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~a-GAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 144 QPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAA-GADVFIVGTSGLFNHAE 204 (231)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHH-TCCEEEECTTTTGGGCS
T ss_pred ccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHc-CCCEEEEccHHHhCCCC
Confidence 22356667776654 68999999998 5888888886 99999999 99887554
No 224
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=97.75 E-value=0.00057 Score=68.90 Aligned_cols=134 Identities=12% Similarity=0.111 Sum_probs=104.4
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
.|+...+...+++++++.++ .++.|+..|-+..|.. +++.-.+.++++++.+ +..+.|...-+
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~ 197 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNCG 197 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 34556677789999888775 5677999999987632 3555666777777766 46777777778
Q ss_pred CChhhHHHHHHHH--HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCccee
Q 013813 236 PNLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 236 ~~~~d~~~~ak~l--e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgV 313 (436)
|+.+++.++++.+ ++.++.+|- ++. .+.|++..+++++.+++||.+.-.+.+.+++.++++...+|.|
T Consensus 198 ~~~~~A~~~~~~L~~~~~~i~~iE------eP~----~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v 267 (365)
T 3ik4_A 198 YDVERALAFCAACKAESIPMVLFE------QPL----PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVI 267 (365)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE------CCS----CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHhhCCCCceEEE------CCC----CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEE
Confidence 9999999999999 777776663 111 1347899999999999999999999999999999998789998
Q ss_pred eee
Q 013813 314 LSA 316 (436)
Q Consensus 314 mIG 316 (436)
++-
T Consensus 268 ~ik 270 (365)
T 3ik4_A 268 NIK 270 (365)
T ss_dssp EEC
T ss_pred EEc
Confidence 764
No 225
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.75 E-value=0.0012 Score=65.24 Aligned_cols=207 Identities=13% Similarity=0.102 Sum_probs=128.0
Q ss_pred HHHHHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--ccc-hhhccChhh--------hhhhhhccCCCCCE
Q 013813 92 RAWAHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LHS-RIFTESEKY--------RNEEFATCKEDRPL 160 (436)
Q Consensus 92 ~~~~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--isa-~~l~~~~~~--------~~~~~~~~~~e~pl 160 (436)
.+-.||+.+.+...+. |.++=|..+-+++.+.|.+.+|+-= ++. .++...... ...... ..+.|+
T Consensus 17 ~a~~lr~l~~~~~~i~--~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r--~~~~pv 92 (305)
T 3ih1_A 17 LANRFRALVEANEILQ--IPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVR--ATDLPV 92 (305)
T ss_dssp HHHHHHHHHHSSSCEE--EEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHH--HHCCCE
T ss_pred HHHHHHHHHhCCCcEE--EecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHH--hcCCCE
Confidence 3445766655444444 4477788898999999999877542 111 111111000 001011 124688
Q ss_pred EEEec-C-CCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC-
Q 013813 161 FVQFC-A-NDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP- 236 (436)
Q Consensus 161 ivQL~-g-~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~- 236 (436)
++=+= | .+++...+.++.+ +.|+++|.|--+...+ +.|+.++.-+-..+...+-|++++++ +.++.|--|...
T Consensus 93 iaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k--rcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~ 169 (305)
T 3ih1_A 93 LVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPK--KCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDAR 169 (305)
T ss_dssp EEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSC--CTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCH
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCc--ccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccc
Confidence 87542 1 3577788888655 5699999998763211 11223333334455555556666655 666666666642
Q ss_pred ---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc---cC---CCCHHHHHHHHHh
Q 013813 237 ---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---GN---VRHMEDVQKCLEE 307 (436)
Q Consensus 237 ---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian---GG---I~s~eda~~~l~~ 307 (436)
..+++++=++.++++|+|.|.+++.. +.+.++++.+.+++|+++| || ..+.+++ -+
T Consensus 170 ~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~-----------~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL---~~- 234 (305)
T 3ih1_A 170 GVEGLDEAIERANAYVKAGADAIFPEALQ-----------SEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEF---AN- 234 (305)
T ss_dssp HHHCHHHHHHHHHHHHHHTCSEEEETTCC-----------SHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHH---HH-
T ss_pred cccCHHHHHHHHHHHHHcCCCEEEEcCCC-----------CHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHH---HH-
Confidence 36788888999999999999998752 3477899999999999876 33 3444433 33
Q ss_pred cCcceeeeehHHh
Q 013813 308 TGCEGVLSAESLL 320 (436)
Q Consensus 308 tGaDgVmIGRgal 320 (436)
-|+..|.+|-.++
T Consensus 235 lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 235 MGFQMVIYPVTSL 247 (305)
T ss_dssp TTCSEEEECSHHH
T ss_pred cCCCEEEEchHHH
Confidence 4999999996554
No 226
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.74 E-value=4e-05 Score=81.69 Aligned_cols=92 Identities=11% Similarity=0.136 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCH-----------HHHHHHHHh
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHM-----------EDVQKCLEE 307 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~-----------eda~~~l~~ 307 (436)
.++.++|+.+++.|++.|++..-+...........+.+.++++++.+.+||++.|||++. ++++++++.
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~a 359 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRS 359 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHc
Confidence 478899999999999999886544321100011235788999999899999999999998 559999986
Q ss_pred cCcceeeeehHHhh-------------CCccchhhhh
Q 013813 308 TGCEGVLSAESLLE-------------NPALFAGFRT 331 (436)
Q Consensus 308 tGaDgVmIGRgal~-------------nP~lf~~i~~ 331 (436)
|||.|.||++++. ||.+++++..
T Consensus 360 -Gad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 360 -GADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp -TCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred -CCCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 9999999999988 4788887754
No 227
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.71 E-value=0.00035 Score=66.12 Aligned_cols=139 Identities=8% Similarity=0.138 Sum_probs=95.9
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHH---HHhcccCccEEEEe
Q 013813 156 EDRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVE---KLALNLNVPVSCKI 232 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~---av~~~~~iPVsVKi 232 (436)
++.|+.+.|+-+||+.+.+.. ++ +|.|-+|..... .+ +.+.++ .+++ .++-+.|=+
T Consensus 63 p~~~~dvhLmv~dp~~~i~~~--~~--Ad~itvH~ea~~-------------~~---~~~~i~~~~~i~~-~G~k~gval 121 (227)
T 1tqx_A 63 KSIFFDVHLMVEYPEKYVPLL--KT--SNQLTFHFEALN-------------ED---TERCIQLAKEIRD-NNLWCGISI 121 (227)
T ss_dssp SSCEEEEEEESSCGGGGGGGC--TT--SSEEEEEGGGGT-------------TC---HHHHHHHHHHHHT-TTCEEEEEE
T ss_pred CCCcEEEEEEEcCHHHHHHHH--Hh--CCEEEEeecCCc-------------cC---HHHHHHHHHHHHH-cCCeEEEEe
Confidence 368999999999999765332 22 899999964211 02 345555 6654 355555554
Q ss_pred ccCCChhhHHHHHHHHHHcC-ccEE---EeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHh
Q 013813 233 RVFPNLQDTIKYAKMLEDAG-CSLL---AVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEE 307 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG-~d~I---~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~ 307 (436)
..... .+.++.+.+.| +|.| +||.....|.. .+..++.++++++.. +++|.+.|||+ .+.+.++.+.
T Consensus 122 np~tp----~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f---~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~~a 193 (227)
T 1tqx_A 122 KPKTD----VQKLVPILDTNLINTVLVMTVEPGFGGQSF---MHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISASH 193 (227)
T ss_dssp CTTSC----GGGGHHHHTTTCCSEEEEESSCTTCSSCCC---CGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHHHH
T ss_pred CCCCc----HHHHHHHhhcCCcCEEEEeeeccCCCCccc---chHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHHHc
Confidence 33333 23344455665 9999 45555444322 245678888888876 79999999998 7899999886
Q ss_pred cCcceeeeehHHhhCCc
Q 013813 308 TGCEGVLSAESLLENPA 324 (436)
Q Consensus 308 tGaDgVmIGRgal~nP~ 324 (436)
|||.+.+|++++..++
T Consensus 194 -GAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 194 -GANIIVAGTSIFNAED 209 (227)
T ss_dssp -TCCEEEESHHHHTCSS
T ss_pred -CCCEEEEeHHHhCCCC
Confidence 9999999999988665
No 228
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.69 E-value=0.00014 Score=76.17 Aligned_cols=123 Identities=15% Similarity=0.114 Sum_probs=78.4
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
++..+++.++|.+-+.- .|+. ...+.+.++.+++..++||.+|- ++ +. +-++.+. |+
T Consensus 232 ~a~~l~~~gvd~lvvdt-----------a~G~----~~~~L~~I~~l~~~~~vpvi~k~-v~-~~----~~a~~l~--G~ 288 (486)
T 2cu0_A 232 RAIELDKAGVDVIVVDT-----------AHAH----NLKAIKSMKEMRQKVDADFIVGN-IA-NP----KAVDDLT--FA 288 (486)
T ss_dssp HHHHHHHTTCSEEEEEC-----------SCCC----CHHHHHHHHHHHHTCCSEEEEEE-EC-CH----HHHTTCT--TS
T ss_pred HHHHHHHhcCCceEEEe-----------cCCc----EeehhhHHHHHHHHhCCccccCC-cC-CH----HHHHHhh--CC
Confidence 33345567888876552 1111 12344556777777799999882 11 22 2344444 99
Q ss_pred cEEEeccCccccc------CCCCCc---cCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 254 SLLAVHGRTRDEK------DGKKFR---ADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 254 d~I~VHgRt~~~~------~~~~g~---ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
|.|.+ |.-.... .+. |. ..+..+.++++..++|||+.|||.+..|+.++|.. |||+||+|+.++.-
T Consensus 289 d~v~v-g~g~g~~~~~r~~~~~-g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kalal-GA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 289 DAVKV-GIGPGSICTTRIVAGV-GVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAA-GADAVMLGNLLAGT 363 (486)
T ss_dssp SEEEE-CSSCSTTBCHHHHTCC-CCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHHT-TCSEEEESTTTTTB
T ss_pred CeEEE-eeeeccceeeeEEeec-CcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHHc-CCCceeeChhhhcC
Confidence 99998 3211100 011 11 12334455566668999999999999999999985 99999999998854
No 229
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.66 E-value=7.3e-05 Score=71.19 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=58.0
Q ss_pred HHHHHHHHcCc-----cEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 243 KYAKMLEDAGC-----SLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 243 ~~ak~le~aG~-----d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+.++...+.|. ..|-+-+ +.. ..+.++++++++.+ ++||++.|||+|+++++++++ |||+|.+|
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G~-------~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~--gAd~VIVG 218 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SGT-------YGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLR--YADTIIVG 218 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TTS-------CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH--HSSEEEEC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CCC-------cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh--CCCEEEEC
Confidence 44555555554 5555544 221 34789999999999 999999999999999999876 89999999
Q ss_pred hHHhhCCccc
Q 013813 317 ESLLENPALF 326 (436)
Q Consensus 317 Rgal~nP~lf 326 (436)
+++..+|.-+
T Consensus 219 Sa~v~~~~~~ 228 (234)
T 2f6u_A 219 NVIYEKGIDA 228 (234)
T ss_dssp HHHHHHCHHH
T ss_pred hHHHhCHHHH
Confidence 9999998644
No 230
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=97.60 E-value=0.00059 Score=69.92 Aligned_cols=127 Identities=12% Similarity=0.107 Sum_probs=96.0
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCcccccc-cCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFL-MDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~L-l~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
+.++.||..+-++ |...... .-|..+ ..+++...+.+++|++.+ ++++.|...-+++.++++.+++.+++.|+
T Consensus 166 ~~~~~G~~~~K~~---~~~~~~~-K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i 241 (410)
T 3dip_A 166 SLVAEGYAAMKIW---PFDDFAS-ITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGV 241 (410)
T ss_dssp HHHHTTCSEEEEC---TTHHHHT-TCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTC
T ss_pred HHHHcCCCEEEEC---CccCccc-cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 4567899999997 2211110 112211 113456778889999887 47899988888999999999999999999
Q ss_pred cEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 254 SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 254 d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++|-- +.. .+-|++..+++++.+++||.+.+.+.+.++++++++...+|.|++-
T Consensus 242 ~~iEq------P~~---~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 242 LWVED------PIA---KMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp SEEEC------CBS---CTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEC------CCC---CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 98841 100 1347888999999999999999999999999999998789998864
No 231
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.58 E-value=3.6e-05 Score=74.32 Aligned_cols=81 Identities=12% Similarity=0.093 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.++.++|+.+++.|++.+++-.-.. .+.+.++++++.+.+||...|||++. ++++++ . |||-|.+|..
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~---------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~-Ga~~Viigs~ 105 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP---------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-K-WASKVIVTSW 105 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS---------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-T-TCSCEEECGG
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC---------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-c-CCCEEEECcH
Confidence 5788999999999999998843321 35788999999999999999999987 999999 4 9999999999
Q ss_pred HhhC-----Cccchhhhh
Q 013813 319 LLEN-----PALFAGFRT 331 (436)
Q Consensus 319 al~n-----P~lf~~i~~ 331 (436)
++.| |.++.++..
T Consensus 106 a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 106 LFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp GBCTTCCBCHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHH
Confidence 9999 998887653
No 232
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=97.56 E-value=0.00038 Score=71.08 Aligned_cols=128 Identities=13% Similarity=0.007 Sum_probs=96.5
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCcc
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d 254 (436)
+.++.||..+-+..|-|...... .|..-..+++...+.+++|++.+ ++++.|...-+++.++++.+++.+++.|++
T Consensus 162 ~~~~~G~~~~Kik~g~~~~~~~~--~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 239 (400)
T 4dxk_A 162 SLLEDGITAMKIWPFDAAAEKTR--GQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTF 239 (400)
T ss_dssp HHHHTTCCEEEECTTHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCS
T ss_pred HHHHhCCCEEEEcCCCccccccc--cCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 45678999999986633210000 11000123566778888999887 478899888889999999999999999999
Q ss_pred EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 255 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 255 ~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+|.- +. . +.|++..+++++.+++||.+.+.+.+.++++++++...+|.|++-
T Consensus 240 ~iEe------P~-~---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d 291 (400)
T 4dxk_A 240 WHED------PI-K---MDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLD 291 (400)
T ss_dssp EEEC------CB-C---TTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEEC
T ss_pred EEEc------CC-C---cccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 8851 11 1 236777899999999999999999999999999998778998864
No 233
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=97.54 E-value=0.00097 Score=68.08 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=102.3
Q ss_pred HHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHHH
Q 013813 169 PEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYA 245 (436)
Q Consensus 169 ~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~a 245 (436)
++++++.++ .++. |+..|-+..| .+++.-.+.++++++.+ ++++.|...-+|+.++++.++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~ 232 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAG 232 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHH
Confidence 577777664 5677 9999999875 13455566777777776 678899888899999999999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhC
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
+.+++.|+.+|- + .. + |++..+++++.+++||.+...+.+.+++.++++...+|.|++--+-.+.
T Consensus 233 ~~l~~~~i~~iE-------q--P~--~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GG 297 (398)
T 4dye_A 233 IALEELDLEYLE-------D--PC--V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGG 297 (398)
T ss_dssp HHHGGGCCSEEE-------C--CS--S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHhhcCCCEEc-------C--CC--C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCC
Confidence 999999999883 2 12 3 7888999999999999999999999999999998889999987555443
No 234
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.41 E-value=0.0032 Score=65.33 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=108.3
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
+.|+.-+=|.-++-++.+ ....|+|+|=|++.+ + +.+.+.++++..++ .++.+.|-+..
T Consensus 108 ~lPvLrKDFI~d~~Qi~e---a~~~GAD~ILLi~a~--------------l-~~~~l~~l~~~a~~-lgm~~LvEvh~-- 166 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL---ARYYQADACLLMLSV--------------L-DDDQYRQLAAVAHS-LEMGVLTEVSN-- 166 (452)
T ss_dssp CSCEEEESCCCSHHHHHH---HHHTTCSEEEEETTT--------------C-CHHHHHHHHHHHHH-TTCEEEEEECS--
T ss_pred CCCeEEEeccCCHHHHHH---HHHcCCCEEEEEccc--------------C-CHHHHHHHHHHHHH-cCCeEEEEeCC--
Confidence 678888888878765444 445799999999643 1 24677888887765 58888777532
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
.++ ++.+.++|++.|-+..|.-.. ...|++...++.+.+ ++++|+-|||.|++|+.++.+. +|+|.
T Consensus 167 -~eE----~~~A~~lga~iIGinnr~L~t-----~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avL 234 (452)
T 1pii_A 167 -EEE----QERAIALGAKVVGINNRDLRD-----LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF--ANGFL 234 (452)
T ss_dssp -HHH----HHHHHHTTCSEEEEESEETTT-----TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT--CSEEE
T ss_pred -HHH----HHHHHHCCCCEEEEeCCCCCC-----CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh--CCEEE
Confidence 222 455667899999998886432 257888888888775 6899999999999999999875 99999
Q ss_pred eehHHhhCCccchhhhh
Q 013813 315 SAESLLENPALFAGFRT 331 (436)
Q Consensus 315 IGRgal~nP~lf~~i~~ 331 (436)
||.+++..++.-..++.
T Consensus 235 VGealmr~~d~~~~~~~ 251 (452)
T 1pii_A 235 IGSALMAHDDLHAAVRR 251 (452)
T ss_dssp ECHHHHTCSCHHHHHHH
T ss_pred EcHHHcCCcCHHHHHHH
Confidence 99999999987665553
No 235
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.38 E-value=0.00079 Score=64.12 Aligned_cols=133 Identities=12% Similarity=0.073 Sum_probs=89.4
Q ss_pred EEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--------CccEEEEe
Q 013813 161 FVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--------NVPVSCKI 232 (436)
Q Consensus 161 ivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--------~iPVsVKi 232 (436)
=+-|+.++|+.+.+.+ ++.|+|+|-+|.+.. +.+.++++.+++.. ++-+.+=+
T Consensus 73 DvhLMv~~p~~~i~~~--~~aGAd~itvH~ea~-----------------~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l 133 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAV--VANGANLVTLQLEQY-----------------HDFALTIEWLAKQKTTYANQVYPVLIGACL 133 (237)
T ss_dssp EEEEECSCHHHHHHHH--HHTTCSEEEEETTCT-----------------TSHHHHHHHHTTCEEEETTEEEECEEEEEE
T ss_pred CeEEEEECHHHHHHHH--HHcCCCEEEEecCCc-----------------ccHHHHHHHHHhcccccccccCCceEEEEE
Confidence 7888889998877766 567999999996421 11456777776541 33344443
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEe---ccCcccccCCCCCccCHHHHHHHHhhC-----CCcEEEccCCCCHHHHHHH
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAV---HGRTRDEKDGKKFRADWNAIKAVKNAL-----RIPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~V---HgRt~~~~~~~~g~ad~~~i~~ik~~~-----~iPVianGGI~s~eda~~~ 304 (436)
......+.. +.+. .++|.|.+ ++....|.. .+..++.++++++.. ++||.+-|||+ .+.+..+
T Consensus 134 ~p~Tp~~~l----~~~l-~~~D~vlvMsv~pgfggq~f---~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~ 204 (237)
T 3cu2_A 134 CPETPISEL----EPYL-DQIDVIQLLTLDPRNGTKYP---SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYF 204 (237)
T ss_dssp CTTSCGGGG----TTTT-TTCSEEEEESEETTTTEECC---HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHH
T ss_pred eCCChHHHH----HHHh-hcCceeeeeeeccCcCCeec---ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHH
Confidence 333222222 2122 36898844 776665432 234466677777765 68999999998 7889998
Q ss_pred HH--hcCcceeeeehHHhhC
Q 013813 305 LE--ETGCEGVLSAESLLEN 322 (436)
Q Consensus 305 l~--~tGaDgVmIGRgal~n 322 (436)
.+ . |||++.+|++++..
T Consensus 205 ~~~~a-Gad~~VvGSaIf~~ 223 (237)
T 3cu2_A 205 KQGTH-QIDWLVSGSALFSG 223 (237)
T ss_dssp HHSSS-CCCCEEECGGGGSS
T ss_pred HHhCC-CCcEEEEeeHHhCC
Confidence 87 6 99999999998874
No 236
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.33 E-value=0.00035 Score=64.89 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=56.2
Q ss_pred HHHHHHcCccEEEeccCcccc-cCCCCCccCHHHHHHHHhh--CCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 245 AKMLEDAGCSLLAVHGRTRDE-KDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~-~~~~~g~ad~~~i~~ik~~--~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
+..++ .|+|+|.+.+-.... +.+...+.+|+.++.+++. .++||++.|||+ ++.+.++++ .|++||.+++++..
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~-~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKD-FGFGGAVVLGDLWN 177 (210)
T ss_dssp HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHH-TTCSEEEESHHHHT
T ss_pred HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHH-hCCCEEEEhHHhHc
Confidence 34446 899999875542211 1122124689999999887 689999999998 899999998 59999999999976
Q ss_pred CCc
Q 013813 322 NPA 324 (436)
Q Consensus 322 nP~ 324 (436)
.++
T Consensus 178 ~~d 180 (210)
T 3ceu_A 178 KFD 180 (210)
T ss_dssp TCC
T ss_pred CCC
Confidence 443
No 237
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.31 E-value=0.0053 Score=60.34 Aligned_cols=204 Identities=13% Similarity=0.130 Sum_probs=123.2
Q ss_pred HHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--cc--chhhccChh--------hhhhhhhccCCCCCEEE
Q 013813 95 AHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LH--SRIFTESEK--------YRNEEFATCKEDRPLFV 162 (436)
Q Consensus 95 ~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--is--a~~l~~~~~--------~~~~~~~~~~~e~pliv 162 (436)
.||+.+.+...+. |.++=|..+-+++.+.|.+.+|+-- ++ ..++..... .... +. ...+.|+++
T Consensus 13 ~lr~l~~~~~~i~--~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~-I~-r~~~~Pvia 88 (298)
T 3eoo_A 13 KFRAAVAAEQPLQ--VVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANR-IT-NATNLPLLV 88 (298)
T ss_dssp HHHHHHHHSSSEE--EEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHH-HH-HHCCSCEEE
T ss_pred HHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHH-HH-hhcCCeEEE
Confidence 4555444333333 4577788888999999999877543 11 111111100 0011 11 123578887
Q ss_pred Ee---cCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCccc-ccccCChHHHHHHHHHHhcccCccEEEEeccCC-
Q 013813 163 QF---CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYG-AFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP- 236 (436)
Q Consensus 163 QL---~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~G-s~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~- 236 (436)
=+ +| +++...+.++.+ +.|+.+|.|--+.-.+ +.|+.+ ..|....+.+.+|-.++....+.++.|--|..-
T Consensus 89 D~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~ 165 (298)
T 3eoo_A 89 DIDTGWG-GAFNIARTIRSFIKAGVGAVHLEDQVGQK--RCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA 165 (298)
T ss_dssp ECTTCSS-SHHHHHHHHHHHHHTTCSEEEEECBCCCC--CTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH
T ss_pred ECCCCCC-CHHHHHHHHHHHHHhCCeEEEECCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh
Confidence 54 33 788888888654 5699999998653211 112223 344444444555544443333566666666632
Q ss_pred ---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc---cC---CCCHHHHHHHHHh
Q 013813 237 ---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---GN---VRHMEDVQKCLEE 307 (436)
Q Consensus 237 ---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian---GG---I~s~eda~~~l~~ 307 (436)
..+++++=++...++|+|.|-+++.+ +.+.++++.+.+++||.+| || ..+.+++ -+
T Consensus 166 ~~~gldeai~Ra~ay~~AGAD~if~~~~~-----------~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL---~~- 230 (298)
T 3eoo_A 166 AAEGIDAAIERAIAYVEAGADMIFPEAMK-----------TLDDYRRFKEAVKVPILANLTEFGSTPLFTLDEL---KG- 230 (298)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCCC-----------SHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHH---HH-
T ss_pred hhcCHHHHHHHHHhhHhcCCCEEEeCCCC-----------CHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHH---HH-
Confidence 35677788888999999999998763 3467888988889999876 33 3344433 33
Q ss_pred cCcceeeeehHHh
Q 013813 308 TGCEGVLSAESLL 320 (436)
Q Consensus 308 tGaDgVmIGRgal 320 (436)
-|+..|.+|-.++
T Consensus 231 lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 231 ANVDIALYCCGAY 243 (298)
T ss_dssp TTCCEEEECSHHH
T ss_pred cCCeEEEEchHHH
Confidence 5999999986554
No 238
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=97.29 E-value=0.0022 Score=64.66 Aligned_cols=134 Identities=6% Similarity=0.087 Sum_probs=101.4
Q ss_pred CCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccC---ccEEEEec
Q 013813 158 RPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN---VPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~---iPVsVKiR 233 (436)
.|+...+.+.+++.+.+.++ .++.|+..+-+..|. .+++.-.+.++++++.++ +.+.+...
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 34555567778988877664 567799999988653 245666777788877764 66777766
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHH--HHHHHHhcCcc
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMED--VQKCLEETGCE 311 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~ed--a~~~l~~tGaD 311 (436)
-+++.++++++++.+++.++.+| ++.. .+-||+..+++++.+++||.+.-.+.+..+ ++++++...+|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~i-------EqP~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d 286 (377)
T 2pge_A 217 GAFSPANAPQRLKRLSQFHLHSI-------EQPI---RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQ 286 (377)
T ss_dssp TBBCTTTHHHHHHHHHTTCCSEE-------ECCB---CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCS
T ss_pred CCCCHHHHHHHHHHHhcCCCcEE-------EccC---CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCC
Confidence 67888999999999999988776 2211 135799999999999999999999998888 77888887899
Q ss_pred eeeee
Q 013813 312 GVLSA 316 (436)
Q Consensus 312 gVmIG 316 (436)
.|++=
T Consensus 287 ~i~ik 291 (377)
T 2pge_A 287 YIILK 291 (377)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88763
No 239
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.21 E-value=0.0018 Score=61.05 Aligned_cols=148 Identities=12% Similarity=0.188 Sum_probs=93.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCch--hhh--cC-------cccccccCChHHHHHHH--------
Q 013813 158 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQR--IAR--RG-------NYGAFLMDNLPLVKSLV-------- 217 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~--~~~--~~-------~~Gs~Ll~~p~~v~eIv-------- 217 (436)
.|++.=|-+.+++++.+.++.+ +.|++.|++-+--|.. ..+ +. ++|. ++ +.+.+...+
T Consensus 17 ~~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 17 LKIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSGADFVV 94 (224)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHTCSEEE
T ss_pred CCeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCCCCEEE
Confidence 5677778888888888877654 5578998987643321 111 11 1233 22 444444333
Q ss_pred ---------HHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CC
Q 013813 218 ---------EKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 287 (436)
Q Consensus 218 ---------~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~i 287 (436)
+..++ .+.++.+.+ ....+ +..+.+.|+|+|-++.- . .. + -.++++.++..+ ++
T Consensus 95 ~p~~d~~v~~~ar~-~g~~~i~Gv------~t~~e-~~~A~~~Gad~vk~Fpa--~-~~---g--G~~~lk~l~~~~~~i 158 (224)
T 1vhc_A 95 TPGLNPKIVKLCQD-LNFPITPGV------NNPMA-IEIALEMGISAVKFFPA--E-AS---G--GVKMIKALLGPYAQL 158 (224)
T ss_dssp CSSCCHHHHHHHHH-TTCCEECEE------CSHHH-HHHHHHTTCCEEEETTT--T-TT---T--HHHHHHHHHTTTTTC
T ss_pred ECCCCHHHHHHHHH-hCCCEEecc------CCHHH-HHHHHHCCCCEEEEeeC--c-cc---c--CHHHHHHHHhhCCCC
Confidence 33333 344444431 11222 45567899999999661 1 00 0 157889999887 89
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
||++.|||+ .+.+.++++..|+++|. |+++...+.+
T Consensus 159 pvvaiGGI~-~~N~~~~l~agga~~v~-gS~i~~~~~i 194 (224)
T 1vhc_A 159 QIMPTGGIG-LHNIRDYLAIPNIVACG-GSWFVEKKLI 194 (224)
T ss_dssp EEEEBSSCC-TTTHHHHHTSTTBCCEE-ECGGGCHHHH
T ss_pred eEEEECCcC-HHHHHHHHhcCCCEEEE-EchhcCcchh
Confidence 999999995 68999999866999999 8877665543
No 240
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.20 E-value=0.0025 Score=59.22 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=86.9
Q ss_pred EEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhH
Q 013813 162 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDT 241 (436)
Q Consensus 162 vQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~ 241 (436)
+-++ ..|+.+.+ ..++.|+|.|-+|... | .+.+.++++.+++ .+.++.+++-.+.+..
T Consensus 63 ~kl~-dip~t~~~--~~~~~Gad~itvh~~~----------g------~~~l~~~~~~~~~-~g~~~~~~ll~~~t~~-- 120 (216)
T 1q6o_A 63 AKIA-DAGKILSR--MCFEANADWVTVICCA----------D------INTAKGALDVAKE-FNGDVQIELTGYWTWE-- 120 (216)
T ss_dssp EEEC-SCHHHHHH--HHHHTTCSEEEEETTS----------C------HHHHHHHHHHHHH-TTCEEEEEECSCCCHH--
T ss_pred EEec-ccHHHHHH--HHHhCCCCEEEEeccC----------C------HHHHHHHHHHHHH-cCCCceeeeeeCCChh--
Confidence 5555 35777766 3456799999999531 1 2335566666665 3777766652133312
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
-++.+++.|.+.+.+|--......+..| ..+.++.+++.. ++||++.|||+ ++.+.++++. |+|+|.+||++
T Consensus 121 --~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~a-Gad~ivvG~~I 194 (216)
T 1q6o_A 121 --QAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGI-PIHVFIAGRSI 194 (216)
T ss_dssp --HHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTS-CCSEEEESHHH
T ss_pred --hHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHc-CCCEEEEeehh
Confidence 2344556688777775422211122222 246677777665 68899999998 7888888875 99999999999
Q ss_pred hhCCc
Q 013813 320 LENPA 324 (436)
Q Consensus 320 l~nP~ 324 (436)
+..++
T Consensus 195 ~~a~d 199 (216)
T 1q6o_A 195 RDAAS 199 (216)
T ss_dssp HTSSC
T ss_pred cCCCC
Confidence 87554
No 241
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.15 E-value=0.016 Score=56.57 Aligned_cols=206 Identities=10% Similarity=0.049 Sum_probs=126.4
Q ss_pred HHHHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--ccc--hhhccChhh-hhhhh-----hccCCCCCEEE
Q 013813 93 AWAHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LHS--RIFTESEKY-RNEEF-----ATCKEDRPLFV 162 (436)
Q Consensus 93 ~~~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--isa--~~l~~~~~~-~~~~~-----~~~~~e~pliv 162 (436)
+-.|++.+.++..+. |.++=|..+-+++.+.|.+.+|+-- ++. .++...... ....+ -..-.+.|+++
T Consensus 10 ~~~lr~l~~~~~~i~--~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~Pvia 87 (287)
T 3b8i_A 10 RAMFRALLDSSRCYH--TASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIA 87 (287)
T ss_dssp HHHHHHHHHSSCCEE--CEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 344666554433333 6688899999999999999877552 221 121111100 00000 01134578887
Q ss_pred Ee---cCCCHHHHHHHHHH-HcCCCcEEEEecCC-CchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC-
Q 013813 163 QF---CANDPEILLNAARR-VEPYCDYVDINLGC-PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF- 235 (436)
Q Consensus 163 QL---~g~d~e~~~~AA~~-v~~g~D~IdLN~GC-P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg- 235 (436)
=+ +| +++...+.++. ++.|+++|.|--+. |.++ |+.++. +-..+...+-|++++++- +.++.|--|..
T Consensus 88 D~d~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrc---gh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtda 162 (287)
T 3b8i_A 88 DADHGYG-NALNVMRTVVELERAGIAALTIEDTLLPAQF---GRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTNA 162 (287)
T ss_dssp ECTTCSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCT---TTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEET
T ss_pred ECCCCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCcccc---CCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEechh
Confidence 65 35 88888888865 45699999998764 3222 333344 455666666666665543 33444444442
Q ss_pred --CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc-cC---CCCHHHHHHHHHhcC
Q 013813 236 --PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN-GN---VRHMEDVQKCLEETG 309 (436)
Q Consensus 236 --~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian-GG---I~s~eda~~~l~~tG 309 (436)
...+++++=++.++++|+|.|.+++.. +.+.++++.+.+++|++.. || ..+.+++ -+ -|
T Consensus 163 a~~gl~~ai~Ra~ay~eAGAd~i~~e~~~-----------~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL---~~-lG 227 (287)
T 3b8i_A 163 ELIDVDAVIQRTLAYQEAGADGICLVGVR-----------DFAHLEAIAEHLHIPLMLVTYGNPQLRDDARL---AR-LG 227 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCSEEEEECCC-----------SHHHHHHHHTTCCSCEEEECTTCGGGCCHHHH---HH-TT
T ss_pred hhcCHHHHHHHHHHHHHcCCCEEEecCCC-----------CHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHH---HH-cC
Confidence 234678888999999999999998642 3467899999999998832 33 4454433 33 49
Q ss_pred cceeeeehHHh
Q 013813 310 CEGVLSAESLL 320 (436)
Q Consensus 310 aDgVmIGRgal 320 (436)
+..|..|-.++
T Consensus 228 v~~v~~~~~~~ 238 (287)
T 3b8i_A 228 VRVVVNGHAAY 238 (287)
T ss_dssp EEEEECCCHHH
T ss_pred CcEEEEChHHH
Confidence 99998886543
No 242
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.15 E-value=0.0016 Score=68.20 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.+..+.++.+.++|+|.|.++..... ....++.++++++.. ++||++ |+|.+.++++.+.+. |||+|.+|
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~~a-GaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH------SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALAEA-GADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS------BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHT-TCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCCc------chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHHHc-CCCEEEEC
Confidence 45667788899999999999754321 123468899999887 788887 889999999998886 99999986
No 243
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=97.15 E-value=0.0036 Score=63.53 Aligned_cols=128 Identities=16% Similarity=0.217 Sum_probs=95.0
Q ss_pred CEEEEec-CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 159 PLFVQFC-ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~-g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
|+...++ +.+++++.+.++ .++.|+..+-+..| | ..+ .+.++++++.+ ++.+.+...-+
T Consensus 151 ~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~~ 212 (393)
T 1wuf_A 151 KVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKD----IQFVEAVRKSFPKLSLMADANSA 212 (393)
T ss_dssp EBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBS----HHHHHHHHTTCTTSEEEEECTTC
T ss_pred eeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHH----HHHHHHHHHHcCCCEEEEECCCC
Confidence 3334444 346888877764 55679999999764 1 112 34467777766 45666666667
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.+++ ++++.+++.++.+|- ++. .+-||+..+++++.+++||.+.-.+.+.++++++++...+|.|++
T Consensus 213 ~~~~~a-~~~~~l~~~~i~~iE------qP~----~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 213 YNREDF-LLLKELDQYDLEMIE------QPF----GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp CCGGGH-HHHHTTGGGTCSEEE------CCS----CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHH-HHHHHHHhCCCeEEE------CCC----CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 888888 899999999988873 211 134788899999999999999999999999999999867898876
No 244
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.14 E-value=0.0015 Score=60.91 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=81.6
Q ss_pred CCCEE--EEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLF--VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~pli--vQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.|++ +-++ ..++.+.+. .++.|+|+|-++...+ .+.+.++++.+++. ++.+.+.+ +
T Consensus 59 ~~~i~ld~~l~-d~p~~~~~~--~~~aGad~i~vh~~~~----------------~~~~~~~~~~~~~~-g~~~~~d~-l 117 (218)
T 3jr2_A 59 NHILVCDMKTT-DGGAILSRM--AFEAGADWITVSAAAH----------------IATIAACKKVADEL-NGEIQIEI-Y 117 (218)
T ss_dssp TSEEEEEEEEC-SCHHHHHHH--HHHHTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEEC-C
T ss_pred CCcEEEEEeec-ccHHHHHHH--HHhcCCCEEEEecCCC----------------HHHHHHHHHHHHHh-CCccceee-e
Confidence 44554 4555 346665533 3456999999995321 23456677776643 55554422 3
Q ss_pred CC-ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh--CCCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 235 FP-NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 235 g~-~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~--~~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
+. +.+ -++.+.+.|+|++.++-.+..+..+. ...-+.++++++. .++||++.|||+ ++.+.++++. |||
T Consensus 118 ~~~T~~----~~~~~~~~g~d~v~~~~~~~~~~~g~--~~~~~~l~~i~~~~~~~~pi~v~GGI~-~~~~~~~~~a-GAd 189 (218)
T 3jr2_A 118 GNWTMQ----DAKAWVDLGITQAIYHRSRDAELAGI--GWTTDDLDKMRQLSALGIELSITGGIV-PEDIYLFEGI-KTK 189 (218)
T ss_dssp SSCCHH----HHHHHHHTTCCEEEEECCHHHHHHTC--CSCHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTS-CEE
T ss_pred ecCCHH----HHHHHHHcCccceeeeeccccccCCC--cCCHHHHHHHHHHhCCCCCEEEECCCC-HHHHHHHHHc-CCC
Confidence 32 222 23445566999987642221111111 1122334445443 489999999994 8999888875 999
Q ss_pred eeeeehHHhhC
Q 013813 312 GVLSAESLLEN 322 (436)
Q Consensus 312 gVmIGRgal~n 322 (436)
+|.+||++...
T Consensus 190 ~vvvGsaI~~a 200 (218)
T 3jr2_A 190 TFIAGRALAGA 200 (218)
T ss_dssp EEEESGGGSHH
T ss_pred EEEEchhhcCC
Confidence 99999987653
No 245
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.13 E-value=0.0032 Score=62.04 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=80.4
Q ss_pred HHcCCCcEEEEe--cCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEec-----cCC--Ch-hhHHHHHHH
Q 013813 178 RVEPYCDYVDIN--LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIR-----VFP--NL-QDTIKYAKM 247 (436)
Q Consensus 178 ~v~~g~D~IdLN--~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiR-----lg~--~~-~d~~~~ak~ 247 (436)
.++.|+|+|-+. ++.... . ....+.+.+++++++ ..++|+.+=+= ++. +. +...+.++.
T Consensus 117 a~~~GAdaV~vlv~~~~d~~---------~-~~~~~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~ 185 (304)
T 1to3_A 117 VKRDGAKALKLLVLWRSDED---------A-QQRLNMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKE 185 (304)
T ss_dssp HHHTTCCEEEEEEEECTTSC---------H-HHHHHHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEEEcCCCcc---------H-HHHHHHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHHHHH
Confidence 356699998854 331100 0 112244555555544 45889887652 121 11 334455888
Q ss_pred HHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh----CCCc-EEEccCCCCHH----HHHHHHHhcCcceeeeehH
Q 013813 248 LEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA----LRIP-VLANGNVRHME----DVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 248 le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~----~~iP-VianGGI~s~e----da~~~l~~tGaDgVmIGRg 318 (436)
+.+.|+|+|-+|.-.. . . .+|+.+.++.+. +++| |+..||+ +.+ .+..+++. |++||.+||+
T Consensus 186 a~~lGaD~iKv~~~~~-~---~---g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~a-Ga~Gv~vGRa 256 (304)
T 1to3_A 186 LGDSGADLYKVEMPLY-G---K---GARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEA-GASGFLAGRA 256 (304)
T ss_dssp HTTSSCSEEEECCGGG-G---C---SCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHT-TCCEEEESHH
T ss_pred HHHcCCCEEEeCCCcC-C---C---CCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHc-CCeEEEEehH
Confidence 9999999998886322 1 1 156777776666 7999 9999999 453 46666765 9999999999
Q ss_pred HhhC
Q 013813 319 LLEN 322 (436)
Q Consensus 319 al~n 322 (436)
+...
T Consensus 257 I~q~ 260 (304)
T 1to3_A 257 VWSS 260 (304)
T ss_dssp HHGG
T ss_pred HhCc
Confidence 9876
No 246
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.07 E-value=0.0029 Score=63.00 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=69.9
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcC--ccEEEeccCcccccCCCCCccCHHHHHHHHhhCC
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAG--CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR 286 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG--~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~ 286 (436)
+++...+.++.+++ .+.|+++. ++.. .+..+.++.+.++| ++.|.++... + .....|+.++.+++.++
T Consensus 79 ~~~~~~~~i~~~~~-~g~~v~v~--~g~~-~~~~~~a~~~~~~g~~~~~i~i~~~~-----G-~~~~~~~~i~~lr~~~~ 148 (336)
T 1ypf_A 79 QPEKRISFIRDMQS-RGLIASIS--VGVK-EDEYEFVQQLAAEHLTPEYITIDIAH-----G-HSNAVINMIQHIKKHLP 148 (336)
T ss_dssp SGGGHHHHHHHHHH-TTCCCEEE--ECCS-HHHHHHHHHHHHTTCCCSEEEEECSS-----C-CSHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHh-cCCeEEEe--CCCC-HHHHHHHHHHHhcCCCCCEEEEECCC-----C-CcHHHHHHHHHHHHhCC
Confidence 44556666776654 36688887 4544 34456688889999 9998875421 1 11356899999999986
Q ss_pred CcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 287 IPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 287 iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.|++..|+|.+.++++.+.+. |||+|.++
T Consensus 149 ~~~vi~G~v~s~e~A~~a~~a-Gad~Ivvs 177 (336)
T 1ypf_A 149 ESFVIAGNVGTPEAVRELENA-GADATKVG 177 (336)
T ss_dssp TSEEEEEEECSHHHHHHHHHH-TCSEEEEC
T ss_pred CCEEEECCcCCHHHHHHHHHc-CCCEEEEe
Confidence 555556779999999999986 99999993
No 247
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.06 E-value=0.0014 Score=60.43 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
..-.+.+++...|++-+-+. .. -+.++++++.+++|||+.|+|++.+|+.++++. ||++|..+...|+
T Consensus 117 ~~~~~~i~~~~PD~iEiLPG----------i~-p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~a-GA~aVsTs~~~LW 184 (192)
T 3kts_A 117 NKGVALIQKVQPDCIELLPG----------II-PEQVQKMTQKLHIPVIAGGLIETSEQVNQVIAS-GAIAVTTSNKHLW 184 (192)
T ss_dssp HHHHHHHHHHCCSEEEEECT----------TC-HHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTT-TEEEEEECCGGGG
T ss_pred HHHHHHHhhcCCCEEEECCc----------hh-HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHc-CCeEEEeCCHHHh
Confidence 34456667777888855422 22 278999999999999999999999999999997 9999999987766
Q ss_pred CC
Q 013813 322 NP 323 (436)
Q Consensus 322 nP 323 (436)
+-
T Consensus 185 ~~ 186 (192)
T 3kts_A 185 EG 186 (192)
T ss_dssp TT
T ss_pred Cc
Confidence 53
No 248
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.06 E-value=0.0026 Score=64.21 Aligned_cols=95 Identities=23% Similarity=0.327 Sum_probs=72.8
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
+++...+.++.+++...+||.+-+-... .+.++.+.++|+|.|+|+.-.. .+ ...++.++++++..++|
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~ld~a~G-----~~-~~~~~~i~~i~~~~~~~ 147 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIVLDSAHG-----HS-LNIIRTLKEIKSKMNID 147 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEEECCSCC-----SB-HHHHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEEEeCCCC-----Cc-HHHHHHHHHHHHhcCCc
Confidence 5677888889998877889888864322 5678889999999998863221 10 12246788888888999
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
|++ |++.+.++++.+.+. |+|+|.+|
T Consensus 148 Viv-g~v~t~e~A~~l~~a-GaD~I~VG 173 (361)
T 3khj_A 148 VIV-GNVVTEEATKELIEN-GADGIKVG 173 (361)
T ss_dssp EEE-EEECSHHHHHHHHHT-TCSEEEEC
T ss_pred EEE-ccCCCHHHHHHHHHc-CcCEEEEe
Confidence 987 678999999998876 99999996
No 249
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=96.96 E-value=0.0064 Score=61.76 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=97.0
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCC
Q 013813 159 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFP 236 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~ 236 (436)
|+...+...+++++++.++ .++.|+..|-|..|.. .+..+ .+.++++++.+ +..+.|...-++
T Consensus 135 ~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~-----------~~~~d----~~~v~avR~~~~~~~L~vDaN~~w 199 (389)
T 3s5s_A 135 TTDITITTGSPERAEEAARRAAAMGFRALKVKVGGR-----------LAASD----PARIEAIHAAAPGASLILDGNGGL 199 (389)
T ss_dssp ECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG-----------GTTTH----HHHHHHHHHHCTTCEEEEECTTCS
T ss_pred EEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC-----------ChHHH----HHHHHHHHHhCCCCeEEEECCCCC
Confidence 3445667778888887775 4567999999987531 12233 34455566555 456666666688
Q ss_pred ChhhHHHHHHHH--HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 237 NLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 237 ~~~d~~~~ak~l--e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+.++++++++.+ ++.++.+| ++... +-|++..+++++.+++||.+.=.+.+..++.++++...+|.|+
T Consensus 200 ~~~~A~~~~~~L~~~~~~i~~i-------EeP~~---~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~ 269 (389)
T 3s5s_A 200 TAGEALALVAHARRLGADVALL-------EQPVP---RDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVN 269 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE-------ECCSC---TTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEE
T ss_pred CHHHHHHHHHHHhhCCCCeEEE-------ECCCC---cccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEE
Confidence 999999999999 65655554 22111 3478999999999999999999999999999999987899887
Q ss_pred ee
Q 013813 315 SA 316 (436)
Q Consensus 315 IG 316 (436)
+-
T Consensus 270 ~k 271 (389)
T 3s5s_A 270 IK 271 (389)
T ss_dssp EC
T ss_pred ec
Confidence 63
No 250
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.95 E-value=0.052 Score=53.07 Aligned_cols=207 Identities=10% Similarity=0.077 Sum_probs=121.6
Q ss_pred HHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--ccc-hhhccChhhh-hhhh-----hccCCCCCEEEEec
Q 013813 95 AHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LHS-RIFTESEKYR-NEEF-----ATCKEDRPLFVQFC 165 (436)
Q Consensus 95 ~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--isa-~~l~~~~~~~-~~~~-----~~~~~e~plivQL~ 165 (436)
.||+.+.++..+. |.++=|..+-+++.+.|.+.+|+-- ++. .++....... ...+ -..-.+.|+++=+=
T Consensus 6 ~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d 83 (290)
T 2hjp_A 6 ALRAALDSGRLFT--AMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADID 83 (290)
T ss_dssp HHHHHHHHCCCEE--EEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred HHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3565543332233 5678889999999999999988662 221 1211111100 0000 01134578876542
Q ss_pred ---CCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCccc--ccccCChHHHHHHHHHHhcc-cCccEEEEeccC---
Q 013813 166 ---ANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYG--AFLMDNLPLVKSLVEKLALN-LNVPVSCKIRVF--- 235 (436)
Q Consensus 166 ---g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~G--s~Ll~~p~~v~eIv~av~~~-~~iPVsVKiRlg--- 235 (436)
| +++...+.++. ++.|+.+|.|--+.-. .+.++.| +.-+-..+...+-|++++++ ...++.|--|..
T Consensus 84 ~Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~--k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~ 160 (290)
T 2hjp_A 84 TGFG-NAVNVHYVVPQYEAAGASAIVMEDKTFP--KDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALI 160 (290)
T ss_dssp TTTS-SHHHHHHHHHHHHHHTCSEEEEECBCSS--CCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTT
T ss_pred CCCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCC--ccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhh
Confidence 4 78888888865 4569999999876421 1223333 33233344434444444433 223444444443
Q ss_pred --CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--CcEEEcc---CCCCHHHHHHHHHhc
Q 013813 236 --PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANG---NVRHMEDVQKCLEET 308 (436)
Q Consensus 236 --~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~--iPVianG---GI~s~eda~~~l~~t 308 (436)
...+++++=++.++++|+|.|.++++.. +.+.++++.+.++ +|+++|- ...+.+ + |.+-
T Consensus 161 a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~----------~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~---e-L~~l 226 (290)
T 2hjp_A 161 AGLGQQEAVRRGQAYEEAGADAILIHSRQK----------TPDEILAFVKSWPGKVPLVLVPTAYPQLTEA---D-IAAL 226 (290)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEECCCCS----------SSHHHHHHHHHCCCSSCEEECGGGCTTSCHH---H-HHTC
T ss_pred ccccHHHHHHHHHHHHHcCCcEEEeCCCCC----------CHHHHHHHHHHcCCCCCEEEeccCCCCCCHH---H-HHhc
Confidence 2367888889999999999999998542 2356788988888 9999873 244443 3 3345
Q ss_pred C-cceeeeehHHh
Q 013813 309 G-CEGVLSAESLL 320 (436)
Q Consensus 309 G-aDgVmIGRgal 320 (436)
| +..|.+|-.++
T Consensus 227 G~v~~v~~~~~~~ 239 (290)
T 2hjp_A 227 SKVGIVIYGNHAI 239 (290)
T ss_dssp TTEEEEEECSHHH
T ss_pred CCeeEEEechHHH
Confidence 8 99999986654
No 251
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=96.92 E-value=0.013 Score=58.86 Aligned_cols=115 Identities=11% Similarity=0.092 Sum_probs=90.4
Q ss_pred HHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcC
Q 013813 175 AARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAG 252 (436)
Q Consensus 175 AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG 252 (436)
+.+.++.||..+-+..|- +++.-.+.++++++.+ ++.+.|-..-+|+.++++++++.+++.|
T Consensus 152 ~~~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 215 (378)
T 4hpn_A 152 MAERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFG 215 (378)
T ss_dssp HHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcc
Confidence 334567799999887652 2444556777787776 5777788777899999999999999999
Q ss_pred ccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 253 CSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 253 ~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+.+| ++... +-|++..+++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 216 i~~i-------EeP~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 268 (378)
T 4hpn_A 216 IDWF-------EEPVV---PEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQP 268 (378)
T ss_dssp CSCE-------ECCSC---TTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred cchh-------hcCCC---ccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEee
Confidence 8776 22111 35789999999999999999999999999999999878888854
No 252
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.92 E-value=0.042 Score=53.83 Aligned_cols=207 Identities=14% Similarity=0.064 Sum_probs=119.3
Q ss_pred HHHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--ccc-hhhccChhhh-h------hhhhccCCCCCEEEE
Q 013813 94 WAHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LHS-RIFTESEKYR-N------EEFATCKEDRPLFVQ 163 (436)
Q Consensus 94 ~~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--isa-~~l~~~~~~~-~------~~~~~~~~e~plivQ 163 (436)
-.||+.+.++..+. |.++=|..+-+++.+.|.+.+|+-- ++. .++-...... . ..+ ....+.|+++=
T Consensus 9 ~~lr~l~~~~~~i~--~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I-~~~~~~PviaD 85 (295)
T 1s2w_A 9 TQLKQMLNSKDLEF--IMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFM-SDASDVPILLD 85 (295)
T ss_dssp HHHHHHHHSSSCEE--EEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHH-HHTCSSCEEEE
T ss_pred HHHHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHH-HhcCCCCEEec
Confidence 34666554433333 5678899999999999999888662 221 1111100000 0 001 11345788876
Q ss_pred e---cCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCccc---ccccCChHHHHHHHHHHhcccCccEEEEeccC-
Q 013813 164 F---CANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYG---AFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF- 235 (436)
Q Consensus 164 L---~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~G---s~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg- 235 (436)
+ +| +++...+.++ +++.|+.+|.|--+...+ +.++.| ..|....+.+..|-.++....+.++.|--|..
T Consensus 86 ~d~Gyg-~~~~v~~~v~~l~~aGaagv~iED~~~~k--~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda 162 (295)
T 1s2w_A 86 ADTGYG-NFNNARRLVRKLEDRGVAGACLEDKLFPK--TNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEA 162 (295)
T ss_dssp CCSSCS-SHHHHHHHHHHHHHTTCCEEEEECBCC----------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECT
T ss_pred CCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCc--cccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH
Confidence 5 24 5666777775 456799999998764211 223333 23433333344443333333344455554543
Q ss_pred ----CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--CcEEEccC---CCCHHHHHHHHH
Q 013813 236 ----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGN---VRHMEDVQKCLE 306 (436)
Q Consensus 236 ----~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~--iPVianGG---I~s~eda~~~l~ 306 (436)
...+++++=++.++++|+|.|.+++.. .+.+.++++.+.++ +|+++|-+ -.+ +.++-+
T Consensus 163 ~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----------~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~---~~eL~~ 229 (295)
T 1s2w_A 163 FIAGWGLDEALKRAEAYRNAGADAILMHSKK----------ADPSDIEAFMKAWNNQGPVVIVPTKYYKTP---TDHFRD 229 (295)
T ss_dssp TTTTCCHHHHHHHHHHHHHTTCSEEEECCCS----------SSSHHHHHHHHHHTTCSCEEECCSTTTTSC---HHHHHH
T ss_pred HhccccHHHHHHHHHHHHHcCCCEEEEcCCC----------CCHHHHHHHHHHcCCCCCEEEeCCCCCCCC---HHHHHH
Confidence 235788888999999999999998632 22366788888877 99999843 344 444334
Q ss_pred hcCcceeeeehHHh
Q 013813 307 ETGCEGVLSAESLL 320 (436)
Q Consensus 307 ~tGaDgVmIGRgal 320 (436)
-|+..|.+|-.++
T Consensus 230 -lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 230 -MGVSMVIWANHNL 242 (295)
T ss_dssp -HTCCEEEECSHHH
T ss_pred -cCCcEEEEChHHH
Confidence 4999999986544
No 253
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=96.91 E-value=0.0096 Score=60.54 Aligned_cols=141 Identities=13% Similarity=0.099 Sum_probs=97.7
Q ss_pred CEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCC
Q 013813 159 PLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFP 236 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~ 236 (436)
|+...+...+++++++.++ .++.||..|-+..|.+.... .-...++.-.+.|+++++.+ ++.+.|-..-+|
T Consensus 156 ~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~w 228 (393)
T 3u9i_A 156 ETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCGY 228 (393)
T ss_dssp ECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSCC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCCC
Confidence 3445566778888887775 56779999999987543110 00012444556677777766 456666666688
Q ss_pred ChhhHHHHHHHH--HHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 237 NLQDTIKYAKML--EDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 237 ~~~d~~~~ak~l--e~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+.++++++++.+ ++.++.+| ++... +-|++..+++++.+++||.+.=.+.+..++.++++...+|.|+
T Consensus 229 ~~~~A~~~~~~L~~~~~~i~~i-------EeP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~ 298 (393)
T 3u9i_A 229 TAPDALRLLDMLGVHGIVPALF-------EQPVA---KDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLN 298 (393)
T ss_dssp CHHHHHHHHHTTTTTTCCCSEE-------ECCSC---TTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CHHHHHHHHHHHhhCCCCeEEE-------ECCCC---CCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEE
Confidence 999999999999 77777766 22111 2367888999999999999999999999999999987889887
Q ss_pred ee
Q 013813 315 SA 316 (436)
Q Consensus 315 IG 316 (436)
+-
T Consensus 299 ~k 300 (393)
T 3u9i_A 299 IK 300 (393)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 254
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=96.87 E-value=0.018 Score=57.62 Aligned_cols=131 Identities=15% Similarity=0.176 Sum_probs=97.9
Q ss_pred EEEEecC-CCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC
Q 013813 160 LFVQFCA-NDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF 235 (436)
Q Consensus 160 livQL~g-~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg 235 (436)
+...+.+ ..++.+.++++.++ .|+..+-+..|- .+++.-.+.++++++.+ ++.+.|-..-+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~ 198 (370)
T 2chr_A 134 IAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQA 198 (370)
T ss_dssp BEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTC
T ss_pred eeeeeccCchhhhHHHHHHHHhhcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCCC
Confidence 3334444 45666777777665 478888887652 13444455667777766 46677777778
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
|+.+++..+++.+++.++.+| ++... +-|++..+++++.+++||.+.=.+.+..++.++++...+|.|++
T Consensus 199 ~~~~~A~~~~~~l~~~~~~~i-------EeP~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~ 268 (370)
T 2chr_A 199 WDEQVASVYIPELEALGVELI-------EQPVG---RENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSL 268 (370)
T ss_dssp CCTHHHHHHHHHHHTTTCCEE-------ECCSC---SSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhcCCcee-------cCCCC---hhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEe
Confidence 999999999999999998876 22111 34789999999999999999999999999999998877888764
No 255
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.81 E-value=0.015 Score=56.47 Aligned_cols=199 Identities=18% Similarity=0.153 Sum_probs=126.9
Q ss_pred HHHHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--ccc-hhhccChhhh-h------hhhhccCCCCCEEE
Q 013813 93 AWAHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LHS-RIFTESEKYR-N------EEFATCKEDRPLFV 162 (436)
Q Consensus 93 ~~~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--isa-~~l~~~~~~~-~------~~~~~~~~e~pliv 162 (436)
+-.||+.+.. . +. |.++=|..+-+++.+.|.+.+|+-- ++. .++....... . ..+.. -.+.|+++
T Consensus 7 ~~~lr~l~~~-~-i~--~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~-~~~~pvia 81 (275)
T 2ze3_A 7 ARSFHALHQT-G-FL--LPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVR-AVAIPVNA 81 (275)
T ss_dssp HHHHHHHHHH-C-EE--ECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHH-HCSSCEEE
T ss_pred HHHHHHHhhC-C-ee--EecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHh-hcCCCEEe
Confidence 3446655433 3 33 6688899999999999999888662 221 1111110000 0 00111 12368887
Q ss_pred Ee---cCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc---CccEEEEeccC
Q 013813 163 QF---CANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIRVF 235 (436)
Q Consensus 163 QL---~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~---~iPVsVKiRlg 235 (436)
=+ +|.+++...+.++. ++.|+.+|.|--+... -|..| -..+...+-|++++++. ++|+.|--|..
T Consensus 82 D~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~-------~~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtd 153 (275)
T 2ze3_A 82 DIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGL-------TPTEL-YDLDSQLRRIEAARAAIDASGVPVFLNARTD 153 (275)
T ss_dssp ECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSS-------SSSCB-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCC-------CCCcc-CCHHHHHHHHHHHHHhHhhcCCCeEEEEech
Confidence 65 45578888888854 5679999999876531 12333 35555566666665552 68888877764
Q ss_pred C-----------ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEcc--CCCCHHHHH
Q 013813 236 P-----------NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANG--NVRHMEDVQ 302 (436)
Q Consensus 236 ~-----------~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianG--GI~s~eda~ 302 (436)
. ..+++++=++.++++|+|.|.+++.. +.+.++++.+.+++|+..++ +..+.+
T Consensus 154 a~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~-----------~~~~~~~i~~~~~~P~n~~~~~~~~~~~--- 219 (275)
T 2ze3_A 154 TFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLAL-----------QSQDIRALADALRVPLNVMAFPGSPVPR--- 219 (275)
T ss_dssp TTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCC-----------CHHHHHHHHHHCSSCEEEECCTTSCCHH---
T ss_pred hhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCCC-----------CHHHHHHHHHhcCCCEEEecCCCCCCHH---
Confidence 2 24677778889999999999998742 34678899999999987764 355553
Q ss_pred HHHHhcCcceeeeehHH
Q 013813 303 KCLEETGCEGVLSAESL 319 (436)
Q Consensus 303 ~~l~~tGaDgVmIGRga 319 (436)
++-+ -|+..|.+|-.+
T Consensus 220 eL~~-lGv~~v~~~~~~ 235 (275)
T 2ze3_A 220 ALLD-AGAARVSFGQSL 235 (275)
T ss_dssp HHHH-TTCSEEECTTHH
T ss_pred HHHH-cCCcEEEEChHH
Confidence 3333 599999888543
No 256
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.80 E-value=0.0076 Score=56.29 Aligned_cols=150 Identities=13% Similarity=0.118 Sum_probs=94.9
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCch--hhh--c-------CcccccccCChHHHHHHHHHH----
Q 013813 157 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQR--IAR--R-------GNYGAFLMDNLPLVKSLVEKL---- 220 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~--~~~--~-------~~~Gs~Ll~~p~~v~eIv~av---- 220 (436)
+.|++.=|-+.+++++.+.++.+ +.|++.|++-+-.|.. ..+ + -++|. + -+.+.+...+++=
T Consensus 15 ~~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-v-i~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 15 TGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-V-LNPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-C-CSHHHHHHHHHHTCSCE
T ss_pred HCCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-E-EEHHHHHHHHHcCCCEE
Confidence 47888889999999888888654 5689999998644321 111 1 12233 2 2334444333321
Q ss_pred ------------hcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CC
Q 013813 221 ------------ALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 287 (436)
Q Consensus 221 ------------~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~i 287 (436)
++..++++...+. +.. + +..+.+.|+|+|-+|.-. .. + -.++++.++..+ ++
T Consensus 93 ~~p~~d~~v~~~~~~~g~~~i~G~~---t~~---e-~~~A~~~Gad~v~~Fpa~---~~---g--G~~~lk~i~~~~~~i 157 (214)
T 1wbh_A 93 ISPGLTEPLLKAATEGTIPLIPGIS---TVS---E-LMLGMDYGLKEFKFFPAE---AN---G--GVKALQAIAGPFSQV 157 (214)
T ss_dssp EESSCCHHHHHHHHHSSSCEEEEES---SHH---H-HHHHHHTTCCEEEETTTT---TT---T--HHHHHHHHHTTCTTC
T ss_pred EcCCCCHHHHHHHHHhCCCEEEecC---CHH---H-HHHHHHCCCCEEEEecCc---cc---c--CHHHHHHHhhhCCCC
Confidence 1112344443311 122 2 345667899999886611 00 1 157889999887 89
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
||++.|||+ .+.+.++++..|+++|. |+++...+.+
T Consensus 158 pvvaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 158 RFCPTGGIS-PANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp EEEEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred eEEEECCCC-HHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 999999996 68999999866999999 9877665544
No 257
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.78 E-value=0.025 Score=52.06 Aligned_cols=129 Identities=9% Similarity=0.085 Sum_probs=82.0
Q ss_pred CEEEEec--CCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 159 PLFVQFC--ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 159 plivQL~--g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
++=+-++ ++.++.+.+.+ ++.|+|.|-+|.-. | .+ +++.+++.. -|++...+..
T Consensus 55 ~~D~kl~DI~~t~~~~v~~~--~~~Gad~vtvh~~~----------g------~~----~i~~~~~~~--gv~vl~~t~~ 110 (208)
T 2czd_A 55 IADLKLADIPNTNRLIARKV--FGAGADYVIVHTFV----------G------RD----SVMAVKELG--EIIMVVEMSH 110 (208)
T ss_dssp EEEEEECSCHHHHHHHHHHH--HHTTCSEEEEESTT----------C------HH----HHHHHHTTS--EEEEECCCCS
T ss_pred EEEeeeCchHHHHHHHHHHH--HhcCCCEEEEeccC----------C------HH----HHHHHHHhC--CcEEEEecCC
Confidence 3446677 66665544433 45799999999532 1 11 244444443 3334333321
Q ss_pred C------hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEccCCCCH-HHHHHHHHhc
Q 013813 237 N------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHM-EDVQKCLEET 308 (436)
Q Consensus 237 ~------~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianGGI~s~-eda~~~l~~t 308 (436)
. .+....++++..+.|++++.+.+.. .+.++.+++..+ -+++..|||+.- .++.++++.
T Consensus 111 ~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~------------~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~a- 177 (208)
T 2czd_A 111 PGALEFINPLTDRFIEVANEIEPFGVIAPGTR------------PERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKA- 177 (208)
T ss_dssp GGGGTTTGGGHHHHHHHHHHHCCSEEECCCSS------------THHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHH-
T ss_pred cchhhHHHHHHHHHHHHHHHhCCcEEEECCCC------------hHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHc-
Confidence 1 2334566788889999988654321 245677777665 367799999862 378888876
Q ss_pred CcceeeeehHHhhCCc
Q 013813 309 GCEGVLSAESLLENPA 324 (436)
Q Consensus 309 GaDgVmIGRgal~nP~ 324 (436)
|+|++.+||+++..+.
T Consensus 178 Gad~vvvGr~I~~a~d 193 (208)
T 2czd_A 178 GADYIIVGRAIYNAPN 193 (208)
T ss_dssp TCSEEEECHHHHTSSS
T ss_pred CCCEEEEChHHhcCCC
Confidence 9999999999987654
No 258
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.71 E-value=0.0033 Score=57.72 Aligned_cols=102 Identities=12% Similarity=0.075 Sum_probs=68.8
Q ss_pred HHHHHHHHhcccCccEEEEecc--CCC-hhhHHHHHHHHHHcCccEEEecc-------Cc----cccc------------
Q 013813 213 VKSLVEKLALNLNVPVSCKIRV--FPN-LQDTIKYAKMLEDAGCSLLAVHG-------RT----RDEK------------ 266 (436)
Q Consensus 213 v~eIv~av~~~~~iPVsVKiRl--g~~-~~d~~~~ak~le~aG~d~I~VHg-------Rt----~~~~------------ 266 (436)
+.++++.++++ ++||.|=+-+ |.. .++.++|. +..++++|+=+- +. .-++
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL---~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~FliDs~al~~~ 120 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFV---KKAGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERG 120 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHH---HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHH---HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEEEeHHHhhh
Confidence 88999999888 9999998765 332 35666666 667777775310 00 0000
Q ss_pred ------------CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 267 ------------DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 267 ------------~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
.-.++.+--+.++++ +++|||+.|+|+|.+|+.+ ++. ||++|..|.--|++.
T Consensus 121 ~~~I~~~kPD~iEiLPg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~a-GA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 121 IEQIETLGVDVVEVLPGAVAPKVARKI---PGRTVIAAGLVETEEEARE-ILK-HVSAISTSSRILWKM 184 (188)
T ss_dssp HHHHHHHTCSEEEEESGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTT-TSSEEEECCHHHHTC
T ss_pred hhhccccCCCeEeecCCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHC-CCeEEEeCCHHHhCC
Confidence 001122122444444 6889999999999999999 886 999999998776653
No 259
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=96.65 E-value=0.035 Score=54.98 Aligned_cols=124 Identities=8% Similarity=0.066 Sum_probs=92.9
Q ss_pred CCHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++.+.+ +.++.|+..+-|..|. .+++.-.+.++++++.+ ++.+.|-..-+++.+++++
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~ 179 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANR 179 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHH
Confidence 4666666555 5667899999988652 23455567778888876 3667777666788899999
Q ss_pred HHHHHHHc---CccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 244 YAKMLEDA---GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 244 ~ak~le~a---G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+++.+++. ++.+| ++... +-||+..+++++.+++||.+.=.+.+..++.++++...+|.+.+
T Consensus 180 ~~~~l~~~~~~~i~~i-------EqP~~---~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 180 WFAWLDRHGNGKIEYV-------EQPLP---PDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp HHHHHHHHCCTTEEEE-------ECCSC---TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHhhccCCccee-------ECCCC---CCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 99999998 66655 22111 34788899999999999999999999999999999755676654
No 260
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.64 E-value=0.0027 Score=64.02 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++..+.++.+.++|+|.|+++.-... . ..-|+.|+.+++.. ++||++ |+|.|+++++.+.+. |||+|.+|
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-----~-~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~~a-GaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-----A-KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLASC-GADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-----S-HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHHHT-TCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-----c-HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHHHc-CCCEEEEc
Confidence 56678899999999999999632211 0 12378899999875 788887 679999999998886 99999985
No 261
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.62 E-value=0.042 Score=54.13 Aligned_cols=205 Identities=13% Similarity=0.100 Sum_probs=117.7
Q ss_pred HHHHHhCC-CcEEEccCCCCCcHHHHHHHHHhCCCeEEe-Cc-ccc--hhhccChh----h---hhhhhhccCC-CCCEE
Q 013813 95 AHWTKLGR-PKLIVAPMVDNSELPFRMLCRRYGAEAAYT-PM-LHS--RIFTESEK----Y---RNEEFATCKE-DRPLF 161 (436)
Q Consensus 95 ~~~~~lg~-~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~T-em-isa--~~l~~~~~----~---~~~~~~~~~~-e~pli 161 (436)
.||+.+-+ .+.+. |.++=|..+-+++.+.|.+.+|+ .. ++. .++..... . ....+..... ..|++
T Consensus 15 ~lr~ll~~~~~~i~--~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~Pvi 92 (307)
T 3lye_A 15 KLRHLLENTDELIV--CPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLI 92 (307)
T ss_dssp HHHHHHHHCCCCEE--EEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEE
T ss_pred HHHHHHhCCCCeEE--EecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEE
Confidence 46665443 23333 44777888889999999998875 32 211 11111110 0 0011111112 47888
Q ss_pred EEe---cCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccc-cccCChHHHHHHHHHHhcc---cCccEEEEec
Q 013813 162 VQF---CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGA-FLMDNLPLVKSLVEKLALN---LNVPVSCKIR 233 (436)
Q Consensus 162 vQL---~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs-~Ll~~p~~v~eIv~av~~~---~~iPVsVKiR 233 (436)
+=+ +| +++...+.++.+ +.|+.+|.|--....+ +.++.++ .|....+.+.+| ++.+++ .+.++.|--|
T Consensus 93 aD~d~Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cgh~~gk~l~~~~e~~~rI-~Aa~~A~~~~~~d~~I~AR 168 (307)
T 3lye_A 93 ADMDTGYG-GPIMVARTVEHYIRSGVAGAHLEDQILTK--RCGHLSGKKVVSRDEYLVRI-RAAVATKRRLRSDFVLIAR 168 (307)
T ss_dssp EECTTCSS-SHHHHHHHHHHHHHTTCCEEEECCBCCCC----------CBCCHHHHHHHH-HHHHHHHHHTTCCCEEEEE
T ss_pred EECCCCCC-CHHHHHHHHHHHHHcCCeEEEEcCCCCCc--ccCCCCCCeecCHHHHHHHH-HHHHHHHHhcCCCeEEEEe
Confidence 765 34 588888888654 5699999998653211 1222333 344333434444 333332 3556666666
Q ss_pred cC----CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEc---cC---CCCHHHHH
Q 013813 234 VF----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLAN---GN---VRHMEDVQ 302 (436)
Q Consensus 234 lg----~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVian---GG---I~s~eda~ 302 (436)
.. ...+++++=++...++|+|.|-+++.+ +.+.++++.+.++ +||.+| || ..+.+++.
T Consensus 169 TDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~-----------~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~ 237 (307)
T 3lye_A 169 TDALQSLGYEECIERLRAARDEGADVGLLEGFR-----------SKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAK 237 (307)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS-----------CHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHH
T ss_pred chhhhccCHHHHHHHHHHHHHCCCCEEEecCCC-----------CHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHH
Confidence 63 245688888999999999999998753 2366788888764 888765 33 33444433
Q ss_pred HHHHhcCcceeeeehHHh
Q 013813 303 KCLEETGCEGVLSAESLL 320 (436)
Q Consensus 303 ~~l~~tGaDgVmIGRgal 320 (436)
+ -|+..|..+-.++
T Consensus 238 ---~-lGv~~v~~~~~~~ 251 (307)
T 3lye_A 238 ---A-MGFRIMIFSFATL 251 (307)
T ss_dssp ---H-HTCSEEEEETTTH
T ss_pred ---H-cCCeEEEEChHHH
Confidence 3 4999998775443
No 262
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.61 E-value=0.035 Score=54.98 Aligned_cols=205 Identities=12% Similarity=0.071 Sum_probs=123.3
Q ss_pred HHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc--cc--chhhccChhh-hh------hhhhccCCCCCEEEEe
Q 013813 96 HWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM--LH--SRIFTESEKY-RN------EEFATCKEDRPLFVQF 164 (436)
Q Consensus 96 ~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem--is--a~~l~~~~~~-~~------~~~~~~~~e~plivQL 164 (436)
||+.+.+...+. |.++=|..+-+++.+.|.+.+|+-- ++ ..++-..... .. ..+...-.+.|+++=+
T Consensus 31 lr~l~~~~~~i~--~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~ 108 (318)
T 1zlp_A 31 MHRLIEEHGSVL--MPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDG 108 (318)
T ss_dssp HHHHHHHSSSEE--EEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEEC
T ss_pred HHHHHhCCCcEE--EecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeC
Confidence 554443322232 5678889998999999999888653 22 1111111000 00 0011112368888775
Q ss_pred ---cCCCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCC--
Q 013813 165 ---CANDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPN-- 237 (436)
Q Consensus 165 ---~g~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~-- 237 (436)
+| +++...+.++. ++.|+.+|.|--+...+ +.++.|+.-+-..+...+-|++++++. +.++.|--|....
T Consensus 109 d~Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~~k--~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~ 185 (318)
T 1zlp_A 109 DTGGG-GPLNVQRFIRELISAGAKGVFLEDQVWPK--KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAP 185 (318)
T ss_dssp TTCSS-SHHHHHHHHHHHHHTTCCEEEEECBCSSC--CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHH
T ss_pred CCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCc--cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhh
Confidence 35 78888888754 56799999998764211 223344333334444444444444432 3445555555322
Q ss_pred --hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc---c---CCCCHHHHHHHHHhcC
Q 013813 238 --LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---G---NVRHMEDVQKCLEETG 309 (436)
Q Consensus 238 --~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian---G---GI~s~eda~~~l~~tG 309 (436)
.+++++=++.++++|+|.|.+++.. +.+.++++.+.+++|+.+| | ...+.+++ -+ -|
T Consensus 186 ~gl~~ai~Ra~Ay~eAGAd~i~~e~~~-----------~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL---~~-lG 250 (318)
T 1zlp_A 186 HGLEEGIRRANLYKEAGADATFVEAPA-----------NVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEF---KE-MG 250 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCCC-----------SHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHH---HH-HT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEcCCC-----------CHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHH---HH-cC
Confidence 3577888899999999999998652 3467899999999999765 3 34454433 33 49
Q ss_pred cceeeeehHHh
Q 013813 310 CEGVLSAESLL 320 (436)
Q Consensus 310 aDgVmIGRgal 320 (436)
+..|.+|-.++
T Consensus 251 v~~v~~~~~~~ 261 (318)
T 1zlp_A 251 FHLIAHSLTAV 261 (318)
T ss_dssp CCEEEECSHHH
T ss_pred CeEEEEchHHH
Confidence 99999986654
No 263
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.60 E-value=0.0037 Score=58.95 Aligned_cols=149 Identities=13% Similarity=0.149 Sum_probs=89.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCch--hhh--cC-------cccccccCChHHHHHHHHHH-----
Q 013813 158 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQR--IAR--RG-------NYGAFLMDNLPLVKSLVEKL----- 220 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~--~~~--~~-------~~Gs~Ll~~p~~v~eIv~av----- 220 (436)
.+++.=+-+.+++++.+.++.+ +.|++.|++-+-.|.. ..+ +. ++|. ++ +.+.+...+++=
T Consensus 26 ~~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl-~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 26 ARILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VL-DRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CC-SHHHHHHHHHHTCSSEE
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-Ee-eHHHHHHHHHCCCCEEE
Confidence 5677777788888887777644 5578888887543321 011 11 1233 22 334444333321
Q ss_pred -----------hcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCc
Q 013813 221 -----------ALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIP 288 (436)
Q Consensus 221 -----------~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iP 288 (436)
++..++++...+ ....+ +..+.+.|+|+|-++.- .. . .-.++++.++..+ ++|
T Consensus 104 ~p~~d~~v~~~~~~~g~~~i~G~------~t~~e-~~~A~~~Gad~vk~FPa--~~-~-----~G~~~lk~i~~~~~~ip 168 (225)
T 1mxs_A 104 TPGITEDILEAGVDSEIPLLPGI------STPSE-IMMGYALGYRRFKLFPA--EI-S-----GGVAAIKAFGGPFGDIR 168 (225)
T ss_dssp CSSCCHHHHHHHHHCSSCEECEE------CSHHH-HHHHHTTTCCEEEETTH--HH-H-----THHHHHHHHHTTTTTCE
T ss_pred eCCCCHHHHHHHHHhCCCEEEee------CCHHH-HHHHHHCCCCEEEEccC--cc-c-----cCHHHHHHHHhhCCCCe
Confidence 111233333221 11122 34456788888888651 10 0 0257788998877 899
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
|++.|||+ .+.+.++++..|+++|. |++++..+.+
T Consensus 169 vvaiGGI~-~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 169 FCPTGGVN-PANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp EEEBSSCC-TTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred EEEECCCC-HHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 99999995 68999999856999999 9877654443
No 264
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=96.60 E-value=0.024 Score=57.85 Aligned_cols=124 Identities=12% Similarity=0.089 Sum_probs=92.6
Q ss_pred CCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~ 242 (436)
...++++++.++ .++.|+..+-+..|-. ++...+.++++++.+ ++.+.|-..-+++.++++
T Consensus 186 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~A~ 249 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQAKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHTASEAV 249 (412)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHhcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCCHHHHH
Confidence 346788887765 4567999998864321 122234456666655 467777777789999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
.+++.+++.|+.+| ++... +-|++..+++++.+++||.+.=.+.+..|+.++++...+|.|++
T Consensus 250 ~~~~~l~~~~l~~i-------EqP~~---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 312 (412)
T 4h1z_A 250 ALIKAMEPHGLWFA-------EAPVR---TEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQP 312 (412)
T ss_dssp HHHHHHGGGCEEEE-------ECCSC---TTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHhhccccccee-------cCCCC---ccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEe
Confidence 99999999998776 22111 34789999999999999999999999999999999877777653
No 265
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=96.59 E-value=0.044 Score=53.08 Aligned_cols=153 Identities=19% Similarity=0.168 Sum_probs=94.2
Q ss_pred CCCCCcHHHHHHHHHhCCCeEEeCcccc---hhhccChhh-hh------hhhhccCCCCCEEEEec--C--CCHHHHHHH
Q 013813 110 MVDNSELPFRMLCRRYGAEAAYTPMLHS---RIFTESEKY-RN------EEFATCKEDRPLFVQFC--A--NDPEILLNA 175 (436)
Q Consensus 110 M~gvtd~~fR~l~~~~Ga~l~~Temisa---~~l~~~~~~-~~------~~~~~~~~e~plivQL~--g--~d~e~~~~A 175 (436)
|.+.=|..+-+++.+.|.+.+++.--.. -++...... .. ..+.......++++=+- + .++++..+.
T Consensus 21 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 6778899999999999999987652111 111111000 00 11111122234555543 2 257777766
Q ss_pred H-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--------------C--CCh
Q 013813 176 A-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--------------F--PNL 238 (436)
Q Consensus 176 A-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--------------g--~~~ 238 (436)
| ++++.|+++|.|--| +...+.|+++.+ .++||.--+.+ + ...
T Consensus 101 a~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a 160 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGG-------------------VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKA 160 (275)
T ss_dssp HHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CH
T ss_pred HHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHH
Confidence 6 566789999999843 123444555543 37788733332 1 123
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccC
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 294 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGG 294 (436)
+++++=|+.++++|++.|.+.+.. -+..++|.+.+++|+|+.|.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp------------~~~a~~it~~l~iP~igIGa 204 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVL------------AELAKKVTETVSCPTIGIGA 204 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC------------HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHhCCCCEEEECC
Confidence 567777889999999999997642 15578999999999998774
No 266
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.56 E-value=0.07 Score=51.87 Aligned_cols=152 Identities=16% Similarity=0.145 Sum_probs=91.8
Q ss_pred CCCCCcHHHHHHHHHhCCCeEEeCcccc---hhhccCh----hh---hhhhhhccCCCCCEEE-Eec-CC---CHHHHHH
Q 013813 110 MVDNSELPFRMLCRRYGAEAAYTPMLHS---RIFTESE----KY---RNEEFATCKEDRPLFV-QFC-AN---DPEILLN 174 (436)
Q Consensus 110 M~gvtd~~fR~l~~~~Ga~l~~Temisa---~~l~~~~----~~---~~~~~~~~~~e~pliv-QL~-g~---d~e~~~~ 174 (436)
|.+.=|..+-+++.+.|.+.+++.--.. .++.... .. ....+.. -.+.|+++ =+- |+ ++++..+
T Consensus 38 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-~~~~~~vvaD~pfgsy~~s~~~a~~ 116 (281)
T 1oy0_A 38 MLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVR-GAPHALVVADLPFGSYEAGPTAALA 116 (281)
T ss_dssp EEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHH-HCTTSEEEEECCTTSSTTCHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-cCCCCeEEEECCCCcccCCHHHHHH
Confidence 6778899999999999999887652111 1111100 00 0001111 12456554 332 22 6777665
Q ss_pred -HHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--------------CCC-
Q 013813 175 -AARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--------------FPN- 237 (436)
Q Consensus 175 -AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--------------g~~- 237 (436)
|.++++ .|+++|.|--| +...+.|+++.+. ++||.--+-+ |.+
T Consensus 117 na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~grt~ 176 (281)
T 1oy0_A 117 AATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQGRGD 176 (281)
T ss_dssp HHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC--------------CH
T ss_pred HHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEeCcH
Confidence 557776 69999999843 1234444454432 6777622211 112
Q ss_pred -hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccC
Q 013813 238 -LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 294 (436)
Q Consensus 238 -~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGG 294 (436)
.+++++=|+.++++|++.|.+.+.. -+..++|.+.+++|+|+.|.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~vp------------~~~a~~it~~l~iP~igIGa 222 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEMVP------------AELATQITGKLTIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESCC------------HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCC------------HHHHHHHHHhCCCCEEEeCC
Confidence 2456677888999999999997642 15578999999999998774
No 267
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.56 E-value=0.004 Score=58.27 Aligned_cols=128 Identities=19% Similarity=0.150 Sum_probs=76.9
Q ss_pred HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe
Q 013813 179 VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV 258 (436)
Q Consensus 179 v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V 258 (436)
.+.|+|+|-|... . +. ...+.+.+.++..++. ++.+.+-+ +... + .+.+.+.|.+.|.+
T Consensus 79 ~~~Gad~Vll~~s----e--r~-------l~~~e~~~~~~~a~~~-Gl~~iv~v--~~~~-e----~~~~~~~~~~~i~~ 137 (219)
T 2h6r_A 79 KDCGCKGTLINHS----E--KR-------MLLADIEAVINKCKNL-GLETIVCT--NNIN-T----SKAVAALSPDCIAV 137 (219)
T ss_dssp HHHTCCEEEESBT----T--BC-------CBHHHHHHHHHHHHHH-TCEEEEEE--SSSH-H----HHHHTTTCCSEEEE
T ss_pred HHcCCCEEEECCc----c--cc-------CCHHHHHHHHHHHHHC-CCeEEEEe--CCch-H----HHHHHhCCCCEEEE
Confidence 3458999988421 0 00 0123356666665433 66555553 3322 2 24456678889989
Q ss_pred ccCcccccCC--CCCccC-H-HHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccchh
Q 013813 259 HGRTRDEKDG--KKFRAD-W-NAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFAG 328 (436)
Q Consensus 259 HgRt~~~~~~--~~g~ad-~-~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~ 328 (436)
+.+..-+... .+...+ . ..++.+++.. ++||++.|||++.+++..+.+. |+|||.||++++.-++....
T Consensus 138 ~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~-gaDgvlVGsAi~~~~d~~~~ 211 (219)
T 2h6r_A 138 EPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDL-GAEGVLLASGVVKAKNVEEA 211 (219)
T ss_dssp CCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTT-TCCCEEESHHHHTCSSHHHH
T ss_pred EeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhC-CCCEEEEcHHHhCcccHHHH
Confidence 8877421110 111112 2 3344455554 7999999999999999997765 99999999999987665443
No 268
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=96.54 E-value=0.019 Score=58.03 Aligned_cols=126 Identities=17% Similarity=0.237 Sum_probs=92.3
Q ss_pred EEec-CCCHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCCh
Q 013813 162 VQFC-ANDPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNL 238 (436)
Q Consensus 162 vQL~-g~d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~ 238 (436)
..++ +.+++++.+.+ +.++.|+..+-+..| | ..+.+. ++++++.+ ++.+.+...-+++.
T Consensus 154 ~~~g~~~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~~~----v~avr~a~~~~~l~vDaN~~~~~ 215 (386)
T 1wue_A 154 ISLGIQEDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYDVEP----VALIRQHFPNLPLMVDANSAYTL 215 (386)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSHHH----HHHHHHHCTTSCEEEECTTCCCG
T ss_pred EEecCCCCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHHHHH----HHHHHHhCCCCeEEEeCCCCCCH
Confidence 3443 34688887766 456779999998765 1 123344 45555544 56777777778888
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++ ++++.+++.++.+|- +... +-||+..+++++.+++||.+.=.+.+.+++.++++...+|.|++=
T Consensus 216 ~~a-~~~~~l~~~~i~~iE-------qP~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik 282 (386)
T 1wue_A 216 ADL-PQLQRLDHYQLAMIE-------QPFA---ADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLK 282 (386)
T ss_dssp GGH-HHHHGGGGSCCSCEE-------CCSC---TTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HHH-HHHHHHHhCCCeEEe-------CCCC---cccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEc
Confidence 888 889999998887762 2111 347888999999999999999999999999999998779988763
No 269
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=96.52 E-value=0.037 Score=56.04 Aligned_cols=130 Identities=12% Similarity=0.221 Sum_probs=96.0
Q ss_pred CCEEEEecCCC-HHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEecc
Q 013813 158 RPLFVQFCAND-PEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d-~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRl 234 (436)
.|+...+...+ ++++.+.++ .++.|+..|-+..| | ..+.+ .++++++.+ ++.+.|-..-
T Consensus 138 v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~-------------~~d~~----~v~avR~~~~~~~l~vDaN~ 199 (388)
T 3qld_A 138 VEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P-------------GRDRA----AIKAVRLRYPDLAIAADANG 199 (388)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T-------------TBSHH----HHHHHHHHCTTSEEEEECTT
T ss_pred EEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c-------------HHHHH----HHHHHHHHCCCCeEEEECCC
Confidence 45556666555 899888775 56789999999865 1 13444 445555554 4667777777
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.+++.. ++.+++.++.+| ++... +-|++..+++++.+++||.+.=.+.+..++.++++...+|.|+
T Consensus 200 ~~~~~~A~~-~~~l~~~~i~~i-------EeP~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~ 268 (388)
T 3qld_A 200 SYRPEDAPV-LRQLDAYDLQFI-------EQPLP---EDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLN 268 (388)
T ss_dssp CCCGGGHHH-HHHGGGGCCSCE-------ECCSC---TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCChHHHHH-HHHHhhCCCcEE-------ECCCC---cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 888888876 788888887766 22111 3478889999999999999998999999999999987789887
Q ss_pred ee
Q 013813 315 SA 316 (436)
Q Consensus 315 IG 316 (436)
+-
T Consensus 269 ~k 270 (388)
T 3qld_A 269 VK 270 (388)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 270
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.48 E-value=0.014 Score=55.11 Aligned_cols=104 Identities=15% Similarity=0.256 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcccCccEEEEeccCC---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCC
Q 013813 211 PLVKSLVEKLALNLNVPVSCKIRVFP---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRI 287 (436)
Q Consensus 211 ~~v~eIv~av~~~~~iPVsVKiRlg~---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~i 287 (436)
..+..+++.+...-++-|+|---.+. +..+..++|+.++++|+.+|.+. ..+.++++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--------------~~~~i~~ir~~v~~ 70 (232)
T 3igs_A 5 SLLEQLDKNIAASGGLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE--------------GIDNLRMTRSLVSV 70 (232)
T ss_dssp CHHHHHHHHHHHHCCEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE--------------SHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhhhcCCEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC--------------CHHHHHHHHHhcCC
Confidence 34566666663333455555422222 34677899999999999998761 24779999999999
Q ss_pred cEEE-c----cC--C---CCHHHHHHHHHhcCcceeeeehHHhhCCccchhh
Q 013813 288 PVLA-N----GN--V---RHMEDVQKCLEETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 288 PVia-n----GG--I---~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i 329 (436)
||++ + || + .+.++++++++. |+|.|.++.++..+|..+.++
T Consensus 71 Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~ 121 (232)
T 3igs_A 71 PIIGIIKRDLDESPVRITPFLDDVDALAQA-GAAIIAVDGTARQRPVAVEAL 121 (232)
T ss_dssp CEEEECBCCCSSCCCCBSCSHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHH
T ss_pred CEEEEEeecCCCcceEeCccHHHHHHHHHc-CCCEEEECccccCCHHHHHHH
Confidence 9986 1 44 3 467789888876 999999998888888655443
No 271
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.45 E-value=0.013 Score=57.53 Aligned_cols=90 Identities=19% Similarity=0.240 Sum_probs=61.8
Q ss_pred HHHHHHHhcccCc-cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE
Q 013813 214 KSLVEKLALNLNV-PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 290 (436)
Q Consensus 214 ~eIv~av~~~~~i-PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi 290 (436)
.+-++++++..+- +|.|-+. +.++ ++.+.++|+|+|-++. .+.+.++++++.+ +++|.
T Consensus 196 ~~ai~~~r~~~~~~kI~vev~---tlee----~~eA~~aGaD~I~ld~------------~~~e~l~~~v~~~~~~~~I~ 256 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEVEVE---NLDE----LDDALKAGADIIMLDN------------FNTDQMREAVKRVNGQARLE 256 (296)
T ss_dssp HHHHHHHHHHSTTSCEEEEES---SHHH----HHHHHHTTCSEEEESS------------CCHHHHHHHHHTTCTTCCEE
T ss_pred HHHHHHHHHhCCCCcEEEEeC---CHHH----HHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeEE
Confidence 4555666655432 4444322 2222 4444578999998863 2346677777666 69999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++||| +.+.+.++.+ +|+|++.+|.....-|+
T Consensus 257 ASGGI-t~~~i~~~a~-~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 257 VSGNV-TAETLREFAE-TGVDFISVGALTKHVRA 288 (296)
T ss_dssp ECCCS-CHHHHHHHHH-TTCSEEECSHHHHEEEC
T ss_pred EECCC-CHHHHHHHHH-cCCCEEEEeHHHcCCCC
Confidence 99999 8999999887 59999999986554454
No 272
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.45 E-value=0.016 Score=55.58 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+..++|+.++++|++.|.|-. -.. .+ .-..+.+..+++.+++||+.-++|.+..++.+++.. |||+|.++..
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt--~~~--~f--~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~-GAD~VlL~~~ 137 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLT--EPH--RF--GGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAF-GASAALLIVA 137 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC--CCS--SS--CCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHT-TCSEEEEEHH
T ss_pred CCHHHHHHHHHHcCCCEEEEec--chh--hh--ccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHc-CCCEEEECcc
Confidence 5778999999999999998831 111 11 124677889999999999999999999999998875 9999999999
Q ss_pred HhhCCccchhh
Q 013813 319 LLENPALFAGF 329 (436)
Q Consensus 319 al~nP~lf~~i 329 (436)
.+. ..++++
T Consensus 138 ~l~--~~l~~l 146 (254)
T 1vc4_A 138 LLG--ELTGAY 146 (254)
T ss_dssp HHG--GGHHHH
T ss_pred chH--HHHHHH
Confidence 887 444433
No 273
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=96.44 E-value=0.026 Score=58.38 Aligned_cols=122 Identities=18% Similarity=0.212 Sum_probs=96.0
Q ss_pred CCHHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++++.|+ .++. ||..|-|..|-. +++.-.+.++++++.+ ++.+.|-..-+|+.++++.
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHH
Confidence 67899988875 4554 999999986531 2344456677777766 6778888778899999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++.+++. +.+| ++. . .+++..+++++.+++||.+.-.+.+..++.++++...+|.|++-
T Consensus 257 ~~~~L~~~-l~~i-------EeP--~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d 316 (445)
T 3vdg_A 257 VAAGLEGV-LEYL-------EDP--T---PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSD 316 (445)
T ss_dssp HHHHTTTT-CSEE-------ECC--S---SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEEC
T ss_pred HHHHHhhH-HHee-------eCC--C---CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeC
Confidence 99999987 7766 221 1 26888999999999999999999999999999998789988874
No 274
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.42 E-value=0.012 Score=55.13 Aligned_cols=141 Identities=11% Similarity=0.093 Sum_probs=85.9
Q ss_pred CCCEE--EEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccC--ccEEEEe
Q 013813 157 DRPLF--VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLN--VPVSCKI 232 (436)
Q Consensus 157 e~pli--vQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~--iPVsVKi 232 (436)
+.+++ +-++ -.|+.+.+++ .+.|+|.|.+|..+. .+.+.+.++.+++.-. ..+.|-+
T Consensus 58 ~~~iflDlKl~-Dip~t~~~~~--~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~ 118 (221)
T 3exr_A 58 DKIIVADTKCA-DAGGTVAKNN--AVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVEL 118 (221)
T ss_dssp TSEEEEEEEEC-SCHHHHHHHH--HTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEEC
T ss_pred CCcEEEEEEee-ccHHHHHHHH--HHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEE
Confidence 44555 4455 5688877763 567999999996322 2335556666654311 2333333
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCc
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGC 310 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGa 310 (436)
-...+.++ ++.+.+.|++.+.+|--...+..+. ....+.++.+++.. +++|...|||+ ++++..+.+. |+
T Consensus 119 lts~~~~~----~~~~~~~~~~~~v~~~a~~~~~~Gv--v~s~~e~~~ir~~~~~~~~i~v~gGI~-~~~~~~~~~a-Ga 190 (221)
T 3exr_A 119 YGDWTYDQ----AQQWLDAGISQAIYHQSRDALLAGE--TWGEKDLNKVKKLIEMGFRVSVTGGLS-VDTLKLFEGV-DV 190 (221)
T ss_dssp CSSCCHHH----HHHHHHTTCCEEEEECCHHHHHHTC--CCCHHHHHHHHHHHHHTCEEEEESSCC-GGGGGGGTTC-CC
T ss_pred cCCCCHHH----HHHHHcCCHHHHHHHHHHhcCCCcc--ccCHHHHHHHHHhhcCCceEEEECCCC-HHHHHHHHHC-CC
Confidence 23334333 3344567999988874332222221 12334466666654 68899999994 6777777765 99
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|.+++||++...++
T Consensus 191 d~~VvG~~I~~a~d 204 (221)
T 3exr_A 191 FTFIAGRGITEAKN 204 (221)
T ss_dssp SEEEECHHHHTSSS
T ss_pred CEEEECchhhCCCC
Confidence 99999999886554
No 275
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=96.42 E-value=0.022 Score=58.96 Aligned_cols=122 Identities=16% Similarity=0.202 Sum_probs=95.7
Q ss_pred CCHHHHHHHHH-HHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAAR-RVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++++.|+ .++. ||..|-|..|-. +++.-.+.++++++.+ ++.+.|-..-+|+.++++.
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKW 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHH
Confidence 57999988775 4555 999999986531 2344456677777766 5778888777899999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++.+++. +.+| ++. . .+++..+++++.+++||.+.-.+.+..++.++++...+|.|++-
T Consensus 255 ~~~~L~~~-l~~i-------EeP--~---~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d 314 (445)
T 3va8_A 255 VAKELEGI-VEYL-------EDP--A---GEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSD 314 (445)
T ss_dssp HHHHTTTT-CSEE-------ESC--B---SHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEEC
T ss_pred HHHHHhhh-cCeE-------eec--C---cCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEec
Confidence 99999987 7766 221 1 26888899999999999999899999999999998789988873
No 276
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.39 E-value=0.0072 Score=57.33 Aligned_cols=148 Identities=11% Similarity=0.111 Sum_probs=95.5
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCch--hh---hc------CcccccccCChHHHHHHHHH------
Q 013813 158 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQR--IA---RR------GNYGAFLMDNLPLVKSLVEK------ 219 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~--~~---~~------~~~Gs~Ll~~p~~v~eIv~a------ 219 (436)
.+++.=+.+.++++..+.++.+ +.|++.||+-+-.|.. .. ++ -+.|. .-+.+.+...+++
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT--Vlt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGT--ILNGEQALAAKEAGATFVV 111 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEEC--CCSHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECC--cCCHHHHHHHHHcCCCEEE
Confidence 5788889999999999999755 5689999997654441 00 00 11233 2246666555544
Q ss_pred -----------HhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CC
Q 013813 220 -----------LALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 287 (436)
Q Consensus 220 -----------v~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~i 287 (436)
+++ .++|+...+. +..+ +..+.++|+|.|-+..... .+ ..++++.++..+ ++
T Consensus 112 sP~~~~~vi~~~~~-~gi~~ipGv~---TptE----i~~A~~~Gad~vK~FPa~~---~g-----G~~~lkal~~p~p~i 175 (232)
T 4e38_A 112 SPGFNPNTVRACQE-IGIDIVPGVN---NPST----VEAALEMGLTTLKFFPAEA---SG-----GISMVKSLVGPYGDI 175 (232)
T ss_dssp CSSCCHHHHHHHHH-HTCEEECEEC---SHHH----HHHHHHTTCCEEEECSTTT---TT-----HHHHHHHHHTTCTTC
T ss_pred eCCCCHHHHHHHHH-cCCCEEcCCC---CHHH----HHHHHHcCCCEEEECcCcc---cc-----CHHHHHHHHHHhcCC
Confidence 221 2444444321 2222 3445789999998865321 11 248899998865 79
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
|++..|||. ++.+.++++. |+.++.+|..+ .++.+.
T Consensus 176 p~~ptGGI~-~~n~~~~l~a-Ga~~~vgGs~l-~~~~~i 211 (232)
T 4e38_A 176 RLMPTGGIT-PSNIDNYLAI-PQVLACGGTWM-VDKKLV 211 (232)
T ss_dssp EEEEBSSCC-TTTHHHHHTS-TTBCCEEECGG-GCHHHH
T ss_pred CeeeEcCCC-HHHHHHHHHC-CCeEEEECchh-cChHHh
Confidence 999999996 8999999986 89988887543 444433
No 277
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.38 E-value=0.018 Score=56.77 Aligned_cols=131 Identities=16% Similarity=0.064 Sum_probs=87.5
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.=.++++.+.+.+ .+||.+.+- .+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ai~l 98 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCG----------NTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATSTAIEL 98 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHHHHHH
Confidence 56677777754 567999987762 234444445566666777666554 489999974 478899999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||
T Consensus 99 a~~A~~~Gadavlv~~P~y~---~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~pnIvgi 166 (316)
T 3e96_A 99 GNAAKAAGADAVMIHMPIHP---YVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPLQNLVGV 166 (316)
T ss_dssp HHHHHHHTCSEEEECCCCCS---CCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTCTTEEEE
T ss_pred HHHHHhcCCCEEEEcCCCCC---CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 99999999999987532211 00111224667888888899986 66 656677887777644344443
No 278
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=96.30 E-value=0.022 Score=57.61 Aligned_cols=125 Identities=9% Similarity=0.032 Sum_probs=93.1
Q ss_pred CCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++++.++ .++.|+..+-+..|-. +++.-.+.++++++.+ ++.+.|-..-+|+.+++++
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~Kikvg~~---------------~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~~ 227 (388)
T 4h83_A 163 EPLGSIADEMHNYQELGLAGVKFKVGGL---------------SAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVD 227 (388)
T ss_dssp CTTCSHHHHHHHHHHHTBSEEEEECSSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCceEeecCCCC---------------CHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHHH
Confidence 34567776665 4566999999886421 2333345567777766 5778888777899999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+++.+++.++.+| ++. ....-|++..+++++.+++||.+.=.+.+..++.++++...+|.|++
T Consensus 228 ~~~~l~~~~~~~i-------EeP--~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 228 LSRRIADLNIRWF-------EEP--VEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHTTTSCCCCE-------ESC--BCSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECC
T ss_pred HHHHhhhcCccee-------ecC--cccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEee
Confidence 9999999998776 221 10012577889999999999999999999999999999877888764
No 279
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.28 E-value=0.047 Score=53.12 Aligned_cols=132 Identities=17% Similarity=0.149 Sum_probs=87.4
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 87 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCG----------TTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEAIAF 87 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHH
Confidence 56667777754 567999987762 234444445666667777666554 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE------ccCCCCHHHHHHHHH-hcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA------NGNVRHMEDVQKCLE-ETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia------nGGI~s~eda~~~l~-~tGaDgV 313 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+. .|---+++.+.++.+ ..++-||
T Consensus 88 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 160 (292)
T 2vc6_A 88 VRHAQNAGADGVLIVSPYYNK---PTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGV 160 (292)
T ss_dssp HHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEE
Confidence 999999999999775432110 00011245677888889999876 454568888888876 4344444
No 280
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.26 E-value=0.1 Score=49.08 Aligned_cols=115 Identities=17% Similarity=0.211 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC-C----ChhhHH
Q 013813 169 PEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF-P----NLQDTI 242 (436)
Q Consensus 169 ~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg-~----~~~d~~ 242 (436)
++.+.+.|+.++ .|+.+|..+ . .+-++++++.+++||.-..|.. . -.....
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~ 91 (229)
T 3q58_A 35 PEIVAAMAQAAASAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYL 91 (229)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSH
T ss_pred cchHHHHHHHHHHCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccH
Confidence 788888887665 489999873 0 2456888999999987444331 1 111223
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+-++.+.++|+|.|.+-...... . ..--++++.+++ .++++++ ++.+.++++++.+. |+|.|.+
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~-p----~~l~~~i~~~~~-~g~~v~~--~v~t~eea~~a~~~-Gad~Ig~ 155 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSR-P----VDIDSLLTRIRL-HGLLAMA--DCSTVNEGISCHQK-GIEFIGT 155 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCC-S----SCHHHHHHHHHH-TTCEEEE--ECSSHHHHHHHHHT-TCSEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCC-h----HHHHHHHHHHHH-CCCEEEE--ecCCHHHHHHHHhC-CCCEEEe
Confidence 34566789999999775432210 0 111356666665 4677665 78999999998886 9999864
No 281
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.24 E-value=0.04 Score=53.48 Aligned_cols=110 Identities=23% Similarity=0.301 Sum_probs=75.6
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccE-EEec-cCcccccCCCCCccCHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSL-LAVH-GRTRDEKDGKKFRADWNAIK 279 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~-I~VH-gRt~~~~~~~~g~ad~~~i~ 279 (436)
-||..+.+..+++++- .+++||.+|.-...+.++....++.+...|... +.+| |-+.-+.+ .....|+..+.
T Consensus 127 Igs~~~~n~~ll~~~a-----~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y-~~~~vdl~~i~ 200 (276)
T 1vs1_A 127 IGARNMQNFPLLREVG-----RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPS-TRFTLDVAAVA 200 (276)
T ss_dssp ECGGGTTCHHHHHHHH-----HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCS-SSSBCBHHHHH
T ss_pred ECcccccCHHHHHHHH-----ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCc-CcchhCHHHHH
Confidence 4788899998877765 358999999655557788888888888999854 4557 43221111 12357899999
Q ss_pred HHHhhCCCcEEEc----cCCCC--HHHHHHHHHhcCcceeeeehH
Q 013813 280 AVKNALRIPVLAN----GNVRH--MEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 280 ~ik~~~~iPVian----GGI~s--~eda~~~l~~tGaDgVmIGRg 318 (436)
.+++..++||++. +|.+. ..-+...+. .||+|+||=+-
T Consensus 201 ~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva-~Ga~Gl~IE~H 244 (276)
T 1vs1_A 201 VLKEATHLPVIVDPSHPAGRRSLVPALAKAGLA-AGADGLIVEVH 244 (276)
T ss_dssp HHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHH-TTCSEEEEEBC
T ss_pred HHHHHhCCCEEEeCCCCCCccchHHHHHHHHHH-cCCCEEEEEec
Confidence 9999889999762 24332 333444455 49999998753
No 282
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.24 E-value=0.018 Score=54.07 Aligned_cols=91 Identities=30% Similarity=0.407 Sum_probs=72.0
Q ss_pred ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 226 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 226 iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
.||..=+|. .+.+++..+++.+.+.|+..|-|.-|+.. ..+.|+.+++.+.-.+|+.|-|.|.++++.++
T Consensus 13 ~~vi~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t~~---------a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVI-DDLVHAIPMAKALVAGGVHLLEVTLRTEA---------GLAAISAIKKAVPEAIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEETTSTT---------HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEc-CCHHHHHHHHHHHHHcCCCEEEEeCCCcc---------HHHHHHHHHHHCCCCeEeeccccCHHHHHHHH
Confidence 355555555 46689999999999999999999877642 35889999998777899999999999999999
Q ss_pred HhcCcceeeeehHHhhCCccchhhh
Q 013813 306 EETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
+. |++.++.= + .||.+.+..+
T Consensus 83 ~A-GA~fivsP-~--~~~evi~~~~ 103 (217)
T 3lab_A 83 DA-GAQFIVSP-G--LTPELIEKAK 103 (217)
T ss_dssp HH-TCSEEEES-S--CCHHHHHHHH
T ss_pred Hc-CCCEEEeC-C--CcHHHHHHHH
Confidence 97 99998752 1 3566655444
No 283
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.21 E-value=0.11 Score=51.08 Aligned_cols=206 Identities=15% Similarity=0.156 Sum_probs=119.5
Q ss_pred HHHHHHhCCC-cEEEccCCCCCcHHHHHHHHHhCCCeEEe-Cc-ccc--hhhccChh-------hhhhhhhccCCCCCEE
Q 013813 94 WAHWTKLGRP-KLIVAPMVDNSELPFRMLCRRYGAEAAYT-PM-LHS--RIFTESEK-------YRNEEFATCKEDRPLF 161 (436)
Q Consensus 94 ~~~~~~lg~~-~i~lAPM~gvtd~~fR~l~~~~Ga~l~~T-em-isa--~~l~~~~~-------~~~~~~~~~~~e~pli 161 (436)
-.||+.+-++ +.++ |.++=|..+-+++.+.|.+.+|+ .. ++. .++..... .....+.....+.|++
T Consensus 7 ~~Lr~ll~~~~~~i~--~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~Pvi 84 (302)
T 3fa4_A 7 TSLRRALENPDSFIV--APGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVI 84 (302)
T ss_dssp HHHHHHHHSTTCCEE--EEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEE
T ss_pred HHHHHHHhCCCCeEE--EecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEE
Confidence 3466665433 2333 34777888889999999998875 32 221 11111110 0001111112378888
Q ss_pred EEe---cCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcc-cccccCChHHHHHHHHHHhc--ccCccEEEEecc
Q 013813 162 VQF---CANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNY-GAFLMDNLPLVKSLVEKLAL--NLNVPVSCKIRV 234 (436)
Q Consensus 162 vQL---~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~-Gs~Ll~~p~~v~eIv~av~~--~~~iPVsVKiRl 234 (436)
+=+ +| +++...+.++.+ +.|+.+|.|--...-+ +.++. |..|....+.+.+|-.++.. ..+.++.|=-|.
T Consensus 85 aD~d~Gyg-~~~~v~~tv~~l~~aGaagv~iEDq~~~K--rcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ART 161 (302)
T 3fa4_A 85 ADADTGYG-GPIMVARTTEQYSRSGVAAFHIEDQVQTK--RCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIART 161 (302)
T ss_dssp EECTTTTS-SHHHHHHHHHHHHHTTCCEEEECSBCCC---------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred EECCCCCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 775 34 588888888655 5699999997543111 11222 23344433444444433321 124566666665
Q ss_pred C----CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEc---cC---CCCHHHHHH
Q 013813 235 F----PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLAN---GN---VRHMEDVQK 303 (436)
Q Consensus 235 g----~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVian---GG---I~s~eda~~ 303 (436)
. ...+++++=++...++|+|.|-+++.+ +.+.++++.+.+ ++|+.+| || ..+.+++.
T Consensus 162 Da~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~-----------~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~- 229 (302)
T 3fa4_A 162 DSLQTHGYEESVARLRAARDAGADVGFLEGIT-----------SREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAK- 229 (302)
T ss_dssp CCHHHHCHHHHHHHHHHHHTTTCSEEEETTCC-----------CHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHH-
T ss_pred cccccCCHHHHHHHHHHHHHcCCCEEeecCCC-----------CHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHH-
Confidence 3 346788888999999999999998753 236678888877 4898775 33 23444443
Q ss_pred HHHhcCcceeeeehHH
Q 013813 304 CLEETGCEGVLSAESL 319 (436)
Q Consensus 304 ~l~~tGaDgVmIGRga 319 (436)
+ -|+..|..+-.+
T Consensus 230 --~-lGv~~v~~~~~~ 242 (302)
T 3fa4_A 230 --E-MGFRIIIFPFAA 242 (302)
T ss_dssp --H-HTCSEEEETTTT
T ss_pred --H-cCCCEEEEchHH
Confidence 3 499888877544
No 284
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.21 E-value=0.18 Score=46.62 Aligned_cols=178 Identities=15% Similarity=0.134 Sum_probs=100.5
Q ss_pred CCCCcHHHHHHHHHhCCCeEEeCcc-cchhhccChhhhhhhhhccCCCCCEEEEecC-CCHHHHHHHHHHHcCCCcEEEE
Q 013813 111 VDNSELPFRMLCRRYGAEAAYTPML-HSRIFTESEKYRNEEFATCKEDRPLFVQFCA-NDPEILLNAARRVEPYCDYVDI 188 (436)
Q Consensus 111 ~gvtd~~fR~l~~~~Ga~l~~Temi-sa~~l~~~~~~~~~~~~~~~~e~plivQL~g-~d~e~~~~AA~~v~~g~D~IdL 188 (436)
-|.|+..=-..+.+.|+|++---+. .+..... ........... +.....|-++- .+++.+.+.++.+ +.|.|.|
T Consensus 7 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~--~ld~vQL 82 (205)
T 1nsj_A 7 CGITNLEDALFSVESGADAVGFVFYPKSKRYIS-PEDARRISVEL-PPFVFRVGVFVNEEPEKILDVASYV--QLNAVQL 82 (205)
T ss_dssp CCCCSHHHHHHHHHHTCSEEEEECCTTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHH--TCSEEEE
T ss_pred CCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhh--CCCEEEE
Confidence 3566665557788899986332232 1221211 11111111111 22334444555 4666666555443 6799999
Q ss_pred ecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCC
Q 013813 189 NLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG 268 (436)
Q Consensus 189 N~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~ 268 (436)
|- . .+++.+.+ ++. ++|+.--++.... .+ + ..+.+..+|++.+..... .++
T Consensus 83 HG-------------~---e~~~~~~~----l~~--~~~vika~~v~~~-~~---l-~~~~~~~~d~~LlD~~~~--~~G 133 (205)
T 1nsj_A 83 HG-------------E---EPIELCRK----IAE--RILVIKAVGVSNE-RD---M-ERALNYREFPILLDTKTP--EYG 133 (205)
T ss_dssp CS-------------C---CCHHHHHH----HHT--TSEEEEEEEESSH-HH---H-HHHGGGTTSCEEEEESCS--SSS
T ss_pred CC-------------C---CCHHHHHH----Hhc--CCCEEEEEEcCCH-HH---H-HHHHHcCCCEEEECCCCC--CCC
Confidence 92 1 24444433 332 3677655555321 22 2 223334489998865432 123
Q ss_pred CCC-ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 269 KKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 269 ~~g-~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
++| ..||+.++.++ ..+.|++..||++ ++.+.++++..++.||=+.+|.-..|
T Consensus 134 GtG~~fdw~~l~~~~-~~~~p~~LAGGL~-peNV~~ai~~~~p~gVDvsSGvE~~p 187 (205)
T 1nsj_A 134 GSGKTFDWSLILPYR-DRFRYLVLSGGLN-PENVRSAIDVVRPFAVDVSSGVEAFP 187 (205)
T ss_dssp SCCSCCCGGGTGGGG-GGSSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGEEET
T ss_pred CCCCccCHHHHHhhh-cCCCcEEEECCCC-HHHHHHHHHhcCCCEEEECCceecCC
Confidence 333 47998776542 3378999999995 78888888877999999998875444
No 285
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.18 E-value=0.041 Score=55.16 Aligned_cols=110 Identities=18% Similarity=0.293 Sum_probs=76.1
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe--ccCcccccCCCCCccCHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV--HGRTRDEKDGKKFRADWNAIK 279 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V--HgRt~~~~~~~~g~ad~~~i~ 279 (436)
-||..+++.++++++- .+++||.+|.-...+.++....++.+.+.|...+++ +|-+.-+.+ .....|+..+.
T Consensus 195 IgAr~~~n~~LL~~va-----~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~-~~~~vdl~ai~ 268 (350)
T 1vr6_A 195 IGARNAQNFRLLSKAG-----SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKA-TRNTLDISAVP 268 (350)
T ss_dssp ECGGGTTCHHHHHHHH-----TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCS-SSSBCCTTHHH
T ss_pred ECcccccCHHHHHHHH-----ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCc-ChhhhhHHHHH
Confidence 4788889988877664 468999999655557788888888888999866655 443221111 12357899999
Q ss_pred HHHhhCCCcEEE-cc---CCCC--HHHHHHHHHhcCcceeeeehH
Q 013813 280 AVKNALRIPVLA-NG---NVRH--MEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 280 ~ik~~~~iPVia-nG---GI~s--~eda~~~l~~tGaDgVmIGRg 318 (436)
.+++..++||++ .. |-+. ..-+...+.. ||||+||=+=
T Consensus 269 ~lk~~~~lpVi~dssHs~G~~~~v~~~a~AAvA~-GA~Gl~IE~H 312 (350)
T 1vr6_A 269 IIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAV-GAHGIIVEVH 312 (350)
T ss_dssp HHHHHBSSCEEECHHHHHCSGGGHHHHHHHHHHH-TCSEEEEEBC
T ss_pred HHHHhhCCCEEEeCCCCCcccchHHHHHHHHHHh-CCCEEEEEec
Confidence 999988999976 22 4332 3334444554 9999998753
No 286
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=96.18 E-value=0.043 Score=56.61 Aligned_cols=122 Identities=14% Similarity=0.182 Sum_probs=95.3
Q ss_pred CCHHHHHHHHHH-HcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAARR-VEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~~-v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++++.|+. ++. ||..|-|..|-. +++.-.+.|+++++.+ ++.+.|-..-+|+.++++.
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHH
Confidence 689999888864 554 999999986531 2344455667777766 5778888777899999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++.+++. +.+| ++. . .+++..+++++.+++||.+.=.+.+..++.++++...+|.|++-
T Consensus 252 ~~~~L~~~-l~~i-------EeP--~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d 311 (441)
T 3vc5_A 252 VGRALDGV-LEYL-------EDP--T---PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLID 311 (441)
T ss_dssp HHHHTTTT-CSEE-------ECC--S---SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHH-HHHh-------hcc--C---CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeec
Confidence 99999987 7665 221 1 27888999999999999998889999999999998789988763
No 287
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=96.16 E-value=0.04 Score=53.13 Aligned_cols=153 Identities=20% Similarity=0.184 Sum_probs=93.8
Q ss_pred CCCCCcHHHHHHHHHhCCCeEEeCc-ccc--hhhccChh----hh---hhhhhccCCCCCEEEEecCC---CHHHHHHHH
Q 013813 110 MVDNSELPFRMLCRRYGAEAAYTPM-LHS--RIFTESEK----YR---NEEFATCKEDRPLFVQFCAN---DPEILLNAA 176 (436)
Q Consensus 110 M~gvtd~~fR~l~~~~Ga~l~~Tem-isa--~~l~~~~~----~~---~~~~~~~~~e~plivQL~g~---d~e~~~~AA 176 (436)
|.+.=|..+-+++.+.|.+.+++.- +.. .++..... .. ...+.......++++=+--. ++++..+.|
T Consensus 21 ~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a 100 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENA 100 (264)
T ss_dssp EEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHH
Confidence 6677899999999999999988752 111 11111100 00 01111112223455554332 677776655
Q ss_pred -HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--------------CCCh---
Q 013813 177 -RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--------------FPNL--- 238 (436)
Q Consensus 177 -~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--------------g~~~--- 238 (436)
++++.|+++|.|--| +...+.|+++.+. ++||.--+-+ |.+.
T Consensus 101 ~rl~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a 160 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG 160 (264)
T ss_dssp HHHHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHH
T ss_pred HHHHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHHH
Confidence 556779999988743 1234455555433 7888732221 2232
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccC
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 294 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGG 294 (436)
+++++=|+.++++|++.|.+.+.. -+..++|.+.+++|+|+.|.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp------------~~~a~~it~~l~iP~igIGa 204 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVP------------VELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCC------------HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHCCCcEEEEecCC------------HHHHHHHHHhCCCCEEEeCC
Confidence 456677888999999999997642 15578999999999998773
No 288
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.14 E-value=0.03 Score=53.87 Aligned_cols=110 Identities=19% Similarity=0.284 Sum_probs=73.8
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEe-ccC-cccccCCCCCccCHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAV-HGR-TRDEKDGKKFRADWNAIK 279 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~V-HgR-t~~~~~~~~g~ad~~~i~ 279 (436)
-||..+++..+++++.+ .++||.+|.-...+.++..+.++.+...|...+++ |-. +.-..+ .....|+..+.
T Consensus 112 Iga~~~~n~~ll~~~a~-----~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~ 185 (262)
T 1zco_A 112 IGARNSQNFELLKEVGK-----VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETA-TRFTLDISAVP 185 (262)
T ss_dssp ECGGGTTCHHHHHHHTT-----SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS-SSSBCCTTHHH
T ss_pred ECcccccCHHHHHHHHh-----cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc-ChhhcCHHHHH
Confidence 36777888887766543 68999999655557888888899999999865554 522 121122 12256888899
Q ss_pred HHHhhCCCcEEEc----cCCCCH--HHHHHHHHhcCcceeeeehH
Q 013813 280 AVKNALRIPVLAN----GNVRHM--EDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 280 ~ik~~~~iPVian----GGI~s~--eda~~~l~~tGaDgVmIGRg 318 (436)
.+++..++||++. +|.+.. .-+..... .|++||||=+-
T Consensus 186 ~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva-~Ga~Gl~iE~H 229 (262)
T 1zco_A 186 VVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYA-IGADGIMVEVH 229 (262)
T ss_dssp HHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHH-TTCSEEEEEBC
T ss_pred HHHhhhCCCEEEEcCCCCCccchHHHHHHHHHH-cCCCEEEEEec
Confidence 9999889998653 233221 22344454 49999999853
No 289
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.12 E-value=0.086 Score=51.56 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=87.3
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~l 99 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGG----------TTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHASIDL 99 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHHHHH
Confidence 56677777754 567999998873 234444445566667777666554 589998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVm 314 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||=
T Consensus 100 a~~A~~~Gadavlv~~P~y~---~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 172 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYN---KPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIK 172 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSS---CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHhcCCCEEEEcCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999977533211 00001124667788888899986 45 4445788888876543444443
No 290
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.11 E-value=0.034 Score=54.76 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=85.8
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++ +++.|+|+|=++ |.-|-+..-..+.-.++++.+.+.+ .+||.+.+-. +..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~----------GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~l 98 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPN----------GNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIEL 98 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTT----------SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC----------cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHH
Confidence 5666777775 456799998766 2234444445666666777666554 5899998643 77889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-c-cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-N-GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-n-GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+. | .|+-+++.+.++.+..++-||
T Consensus 99 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~~pnIvgi 166 (314)
T 3d0c_A 99 GKSAIDSGADCVMIHQPVHPY---ITDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAPLDKLVGI 166 (314)
T ss_dssp HHHHHHTTCSEEEECCCCCSC---CCHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTTCTTEEEE
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHcCCCEEEE
Confidence 999999999999775432210 00011246678888889999865 4 222677888777643344444
No 291
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.11 E-value=0.013 Score=54.90 Aligned_cols=152 Identities=13% Similarity=0.133 Sum_probs=98.5
Q ss_pred CCCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCch--hhh--cCc-----ccccccCChHHHHHHHHH------
Q 013813 156 EDRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQR--IAR--RGN-----YGAFLMDNLPLVKSLVEK------ 219 (436)
Q Consensus 156 ~e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~--~~~--~~~-----~Gs~Ll~~p~~v~eIv~a------ 219 (436)
...|++.=|.+.++++....++.+ +.|++.||+.+-.|.. ..+ +.. -|+.-.-+++.+.+.+++
T Consensus 11 ~~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 11 NTKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp TSCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred hhCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 457899999999999999999765 5589999998765541 111 111 122233356666555544
Q ss_pred -----------HhcccCc------cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHH
Q 013813 220 -----------LALNLNV------PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 282 (436)
Q Consensus 220 -----------v~~~~~i------PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik 282 (436)
.++ .++ |+.-.+- +..+ +..+.++|+|.|-++.-.. .+ ..++++.++
T Consensus 91 sP~~~~evi~~~~~-~~v~~~~~~~~~PG~~---TptE----~~~A~~~Gad~vK~FPa~~---~g-----G~~~lkal~ 154 (217)
T 3lab_A 91 SPGLTPELIEKAKQ-VKLDGQWQGVFLPGVA---TASE----VMIAAQAGITQLKCFPASA---IG-----GAKLLKAWS 154 (217)
T ss_dssp ESSCCHHHHHHHHH-HHHHCSCCCEEEEEEC---SHHH----HHHHHHTTCCEEEETTTTT---TT-----HHHHHHHHH
T ss_pred eCCCcHHHHHHHHH-cCCCccCCCeEeCCCC---CHHH----HHHHHHcCCCEEEECcccc---cc-----CHHHHHHHH
Confidence 221 234 5544421 2222 3445789999998764311 11 147899998
Q ss_pred hhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccc
Q 013813 283 NAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 283 ~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
..+ ++|++..|||+ ++.+.++++. |+..+..| ..+..+.+.
T Consensus 155 ~p~p~i~~~ptGGI~-~~N~~~~l~a-Ga~~~vgG-s~l~~~~~i 196 (217)
T 3lab_A 155 GPFPDIQFCPTGGIS-KDNYKEYLGL-PNVICAGG-SWLTESKLL 196 (217)
T ss_dssp TTCTTCEEEEBSSCC-TTTHHHHHHS-TTBCCEEE-SGGGCHHHH
T ss_pred hhhcCceEEEeCCCC-HHHHHHHHHC-CCEEEEEC-hhhcChhHH
Confidence 765 79999999998 7999999986 88887665 555555544
No 292
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.09 E-value=0.1 Score=50.56 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=86.6
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 87 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVG----------TTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEAIEL 87 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHH
Confidence 56677777754 567999998873 234444445566666777666544 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHH-HhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL-EETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l-~~tGaDgV 313 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++. +..++-||
T Consensus 88 a~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (289)
T 2yxg_A 88 SVFAEDVGADAVLSITPYYNK---PTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAV 160 (289)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 999999999999775332110 0001124667788888899986 45 4446888888877 44344444
No 293
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.06 E-value=0.1 Score=51.17 Aligned_cols=133 Identities=16% Similarity=0.090 Sum_probs=87.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ai~l 99 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLG----------TTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKTLKL 99 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHHHHH
Confidence 56677777754 567999998883 234444445566666777666554 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHH-HhcCcceee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL-EETGCEGVL 314 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l-~~tGaDgVm 314 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++. +..++-||=
T Consensus 100 a~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK 173 (306)
T 1o5k_A 100 VKQAEKLGANGVLVVTPYYNK---PTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIX 173 (306)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEe
Confidence 999999999999775332110 0001124667788888899986 44 4345788888877 443444443
No 294
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=96.06 E-value=0.085 Score=53.02 Aligned_cols=131 Identities=8% Similarity=0.140 Sum_probs=96.5
Q ss_pred CCCEEEEecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc---CccEEEEe
Q 013813 157 DRPLFVQFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKI 232 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~---~iPVsVKi 232 (436)
..|+...+...+++++++.++ .++.|+..+-+..|.. +.+.-.+.++++++++ ++.+.|-.
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDa 203 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADG 203 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEee
Confidence 346667888889998887774 5567999999987631 1222234455555443 46777777
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
.-+++..+++.+++.+++.+. +| ++. -.+++.++.+++..++||.+.=.+.+..++.++++...+|.
T Consensus 204 N~~~~~~~A~~~~~~l~~~~~-~i-------EeP-----~~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~ 270 (376)
T 4h2h_A 204 NRGWTTRDALRFSRECPDIPF-VM-------EQP-----CNSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDG 270 (376)
T ss_dssp TTCCCHHHHHHHHHHCTTSCE-EE-------ESC-----SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred ccCCCHHHHHHHHHHHhhccc-cc-------cCC-----cchhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCc
Confidence 778999999999999887764 32 221 12577788999999999999889999999999999877888
Q ss_pred eee
Q 013813 313 VLS 315 (436)
Q Consensus 313 VmI 315 (436)
|++
T Consensus 271 v~~ 273 (376)
T 4h2h_A 271 FGM 273 (376)
T ss_dssp ECC
T ss_pred ccc
Confidence 865
No 295
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.05 E-value=0.085 Score=51.96 Aligned_cols=132 Identities=18% Similarity=0.109 Sum_probs=87.1
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~~~t~~ai~ 110 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLG----------STGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVS--VSDLTTAKTVR 110 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCCCCHHHHHH
Confidence 56677777754 567999998873 234444445566666777666554 5899998 44 46789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHH-HHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKC-LEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~-l~~tGaDgVm 314 (436)
+++.++++|+|++.+..-.... .+...-+++++.|.+.+++||+ +| |---+++.+.++ .+...+-||=
T Consensus 111 la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiK 185 (315)
T 3na8_A 111 RAQFAESLGAEAVMVLPISYWK---LNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVK 185 (315)
T ss_dssp HHHHHHHTTCSEEEECCCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEE
T ss_pred HHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEE
Confidence 9999999999999875432210 0001225667888888899986 55 545567877777 4433444443
No 296
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.05 E-value=0.071 Score=52.06 Aligned_cols=132 Identities=17% Similarity=0.123 Sum_probs=86.3
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++ .++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 87 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVG----------TTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEAVRY 87 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHHHHH
Confidence 5666777775 4567999988773 234444445566666777666544 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||
T Consensus 88 a~~A~~~Gadavlv~~P~y~---~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 159 (297)
T 2rfg_A 88 AQHAQQAGADAVLCVAGYYN---RPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGV 159 (297)
T ss_dssp HHHHHHHTCSEEEECCCTTT---CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEE
T ss_pred HHHHHhcCCCEEEEcCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEE
Confidence 99999999999977533211 00001124667788888899986 45 544678888887654334443
No 297
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.04 E-value=0.094 Score=51.36 Aligned_cols=135 Identities=17% Similarity=0.114 Sum_probs=89.1
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 102 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSG----------TTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHSIRL 102 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHH
Confidence 55667776754 567999998873 234444445566667777666654 579999842 2467899999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceeeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++.++++|+|++.+..-.... .+...-+++++.|.+.+++||+ +| |---+++.+.++.+..++-||=-.
T Consensus 103 a~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds 177 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSK---PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDA 177 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECC
Confidence 999999999999876432110 0011224667888888999986 54 666678888887754444444333
No 298
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.04 E-value=0.013 Score=56.67 Aligned_cols=91 Identities=15% Similarity=0.252 Sum_probs=60.9
Q ss_pred HHHHHHHhcccC--ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-----C
Q 013813 214 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----R 286 (436)
Q Consensus 214 ~eIv~av~~~~~--iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-----~ 286 (436)
.+-++++++..+ +++.+-+. +.++ ++.+.++|+|+|-++.- +.+.++++++.+ +
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~ 229 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE---SFEE----AKNAMNAGADIVMCDNL------------SVLETKEIAAYRDAHYPF 229 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES---SHHH----HHHHHHHTCSEEEEETC------------CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCceEEEEcC---CHHH----HHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCC
Confidence 456666666654 34555332 2233 33445689999988641 134455444333 4
Q ss_pred CcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 287 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 287 iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+||.++||| +.+.+.++++ +|+|++.+|+.....|++
T Consensus 230 ~~i~AsGGI-~~~ni~~~~~-aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 230 VLLEASGNI-SLESINAYAK-SGVDAISVGALIHQATFI 266 (273)
T ss_dssp CEEEEESSC-CTTTHHHHHT-TTCSEEECTHHHHTCCCC
T ss_pred cEEEEECCC-CHHHHHHHHH-cCCcEEEEcHHhcCCCCC
Confidence 999999999 7899999887 499999999987766654
No 299
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=96.01 E-value=0.067 Score=53.82 Aligned_cols=94 Identities=17% Similarity=0.240 Sum_probs=66.3
Q ss_pred hcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCccc------------------------c-------cC--
Q 013813 221 ALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD------------------------E-------KD-- 267 (436)
Q Consensus 221 ~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~------------------------~-------~~-- 267 (436)
......|.++.+-.+.+.+...++++.++++|++.|.|+--+.. + ..
T Consensus 118 ~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g 197 (370)
T 1gox_A 118 ASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKAND 197 (370)
T ss_dssp HTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC-------
T ss_pred HhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccC
Confidence 33333577777555556666778888889999998877532110 0 00
Q ss_pred ---------CCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 268 ---------GKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 268 ---------~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
......+|+.++.+++.+++||+. +++.+.++++.+.+. |+|+|.++
T Consensus 198 ~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~v-K~~~~~e~a~~a~~~-Gad~I~vs 253 (370)
T 1gox_A 198 SGLSSYVAGQIDRSLSWKDVAWLQTITSLPILV-KGVITAEDARLAVQH-GAAGIIVS 253 (370)
T ss_dssp --HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEE-ECCCSHHHHHHHHHT-TCSEEEEC
T ss_pred ccHHHHHHhhcCccchHHHHHHHHHHhCCCEEE-EecCCHHHHHHHHHc-CCCEEEEC
Confidence 001134688899999999999995 778999999998886 99999985
No 300
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.01 E-value=0.027 Score=56.88 Aligned_cols=97 Identities=16% Similarity=0.261 Sum_probs=68.1
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CC
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RI 287 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~i 287 (436)
+++...+.++.+++.-.++|.+-+ +.. .+..+.++.+.++|++.|.|+.-.. . .....+.++++++.. ++
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~v--g~~-~~~~~~~~~lieaGvd~I~idta~G-----~-~~~~~~~I~~ik~~~p~v 150 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAV--GAA-PGNEERVKALVEAGVDVLLIDSSHG-----H-SEGVLQRIRETRAAYPHL 150 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEEC--CSC-TTCHHHHHHHHHTTCSEEEEECSCT-----T-SHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhcCceeEEEEe--ccC-hhHHHHHHHHHhCCCCEEEEeCCCC-----C-CHHHHHHHHHHHHhcCCC
Confidence 577788888888875444444443 322 2345678889999999998852111 1 012246688888876 78
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
||++ |.|.|.++++++.+. |||+|.+|
T Consensus 151 ~Vi~-G~v~t~e~A~~a~~a-GAD~I~vG 177 (366)
T 4fo4_A 151 EIIG-GNVATAEGARALIEA-GVSAVKVG 177 (366)
T ss_dssp EEEE-EEECSHHHHHHHHHH-TCSEEEEC
T ss_pred ceEe-eeeCCHHHHHHHHHc-CCCEEEEe
Confidence 8776 779999999998886 99999995
No 301
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.00 E-value=0.084 Score=52.43 Aligned_cols=133 Identities=17% Similarity=0.089 Sum_probs=88.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~l 121 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILG----------STGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEAVAL 121 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 56667777754 466999998883 234444445666667777666555 489999843 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVm 314 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||=
T Consensus 122 a~~A~~~Gadavlv~~P~Y~~---~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiK 194 (332)
T 2r8w_A 122 AKDAEAAGADALLLAPVSYTP---LTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIK 194 (332)
T ss_dssp HHHHHHHTCSEEEECCCCSSC---CCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEE
Confidence 999999999999775332110 0001125667888888999986 45 4345888888876544444443
No 302
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.00 E-value=0.011 Score=62.81 Aligned_cols=81 Identities=14% Similarity=0.164 Sum_probs=58.0
Q ss_pred HHHHHHcC---ccEEEeccCcccc-cCCCC-CccCHHHHHHHHhh------CCCcEEEccCCCCHHHHHHHHHh------
Q 013813 245 AKMLEDAG---CSLLAVHGRTRDE-KDGKK-FRADWNAIKAVKNA------LRIPVLANGNVRHMEDVQKCLEE------ 307 (436)
Q Consensus 245 ak~le~aG---~d~I~VHgRt~~~-~~~~~-g~ad~~~i~~ik~~------~~iPVianGGI~s~eda~~~l~~------ 307 (436)
++.+.+.| +|+|.+..-.... +.+.. .+..++.++++++. .++||++-||| +.+++.++++.
T Consensus 121 a~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~ 199 (540)
T 3nl6_A 121 VDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNG 199 (540)
T ss_dssp HHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTS
T ss_pred HHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhccccc
Confidence 45567789 9999885433221 11111 13447778887765 48999999999 68999999972
Q ss_pred -cCcceeeeehHHhhCCccc
Q 013813 308 -TGCEGVLSAESLLENPALF 326 (436)
Q Consensus 308 -tGaDgVmIGRgal~nP~lf 326 (436)
.|+|||.++++++..++..
T Consensus 200 ~~GadgvAVvsaI~~a~dp~ 219 (540)
T 3nl6_A 200 KRSLDGICVVSDIIASLDAA 219 (540)
T ss_dssp SCBCSCEEESHHHHTCTTHH
T ss_pred ccCceEEEEeHHHhcCCCHH
Confidence 4899999999999866643
No 303
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=95.98 E-value=0.053 Score=53.01 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=73.0
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCC-CccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-g~ad~~~i~~ 280 (436)
-||..+++.++++++ . .+++||.+|.-...+.++....++.+...|...+++.-|... +++. ...|+..+..
T Consensus 114 IgA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~--~~y~~~~~dl~~i~~ 186 (292)
T 1o60_A 114 LPAFLARQTDLVEAM----A-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN--FGYDNLIVDMLGFSV 186 (292)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE--CSTTCEECCTTHHHH
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHHH
Confidence 478888998865554 3 468999999555457788888889999999866655444332 2231 1268889999
Q ss_pred HHhhC-CCcEEEc---------------cCCCC--HHHHHHHHHhcCcceeeeehH
Q 013813 281 VKNAL-RIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 281 ik~~~-~iPVian---------------GGI~s--~eda~~~l~~tGaDgVmIGRg 318 (436)
+++.. ++||+.. +|... ..-+...+. .|++|+||=+=
T Consensus 187 lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva-~Ga~Gl~IE~H 241 (292)
T 1o60_A 187 MKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLA-VGIAGLFLEAH 241 (292)
T ss_dssp HHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHH-HCCSEEEEEEE
T ss_pred HHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHH-cCCCEEEEEec
Confidence 99887 8999981 23211 122334444 59999998754
No 304
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.98 E-value=0.13 Score=49.96 Aligned_cols=132 Identities=14% Similarity=0.055 Sum_probs=86.1
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 87 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCG----------TTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEAVHL 87 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 56677777764 567999998873 234444445555566676666544 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHH-HhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL-EETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l-~~tGaDgV 313 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++. +..++-||
T Consensus 88 a~~A~~~Gadavlv~~P~y~---~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (294)
T 2ehh_A 88 TAHAKEVGADGALVVVPYYN---KPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVAS 160 (294)
T ss_dssp HHHHHHTTCSEEEEECCCSS---CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHhcCCCEEEECCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEE
Confidence 99999999999977533211 00001124667788888899986 45 4446888888877 43334443
No 305
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=95.98 E-value=0.18 Score=50.36 Aligned_cols=120 Identities=10% Similarity=0.061 Sum_probs=89.6
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
+++++.+.+ +.++.|+..+-+..|- +++.-.+.++++++.+ ++.+.|...-+++.++++++
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~ 207 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYW 207 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 456666555 5667799999987541 3344456666666665 46778887778899999999
Q ss_pred HHHHHHc-CccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--CcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 245 AKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 245 ak~le~a-G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~--iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.+++. ++.+| ++.. .+-||+..+++++.++ +||.+.=.+.+..++.++ ...+|.|.+
T Consensus 208 ~~~l~~~~~i~~i-------EqP~---~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~i 269 (372)
T 3cyj_A 208 AGAFAREAGISYL-------EEPV---SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQA 269 (372)
T ss_dssp HHHHHHHHCCCEE-------ECSS---CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEE
T ss_pred HHHHHhhcCCcEE-------ECCC---CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEec
Confidence 9999998 88776 2211 1347888999999887 799999999999999987 457898876
No 306
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.93 E-value=0.056 Score=51.14 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=74.5
Q ss_pred HHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccC
Q 013813 215 SLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGN 294 (436)
Q Consensus 215 eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGG 294 (436)
++++.+.+. +|..=+|. .+.+++.++++.+.+.|+..|-|.-++.. ..+.|+++++.+.-.+++.|.
T Consensus 26 ~~~~~l~~~---~vv~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t~~---------a~e~I~~l~~~~~~~~iGaGT 92 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAI-DNAEDIIPLGKVLAENGLPAAEITFRSDA---------AVEAIRLLRQAQPEMLIGAGT 92 (232)
T ss_dssp HHHHHHHHH---CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTSTT---------HHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHhC---CEEEEEEc-CCHHHHHHHHHHHHHCCCCEEEEeCCCCC---------HHHHHHHHHHhCCCCEEeECC
Confidence 344555433 44444444 45688999999999999999999777532 358899999887667999999
Q ss_pred CCCHHHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 295 VRHMEDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 295 I~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
|.+.++++.+++. |||+|+..- .||.+....+
T Consensus 93 Vlt~~~a~~Ai~A-GA~fIvsP~---~~~~vi~~~~ 124 (232)
T 4e38_A 93 ILNGEQALAAKEA-GATFVVSPG---FNPNTVRACQ 124 (232)
T ss_dssp CCSHHHHHHHHHH-TCSEEECSS---CCHHHHHHHH
T ss_pred cCCHHHHHHHHHc-CCCEEEeCC---CCHHHHHHHH
Confidence 9999999999997 999998763 4666655443
No 307
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.88 E-value=0.12 Score=50.66 Aligned_cols=132 Identities=12% Similarity=0.146 Sum_probs=86.7
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCC-ChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFP-NLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~-~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+. .|. +..++++
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG--vg~~~t~~ai~ 97 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGG----------STGEAFVQSLSEREQVLEIVAEEAKGKIKLIAH--VGCVSTAESQQ 97 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECe----------eccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--cCCCCHHHHHH
Confidence 56667777754 567999998873 234444445666667777666554 5899988 443 5688999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEE-Ec----cCC-CCHHHHHHHHHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVL-AN----GNV-RHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVi-an----GGI-~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++|+|++.+..-... ..+...-+++.+.|.+.++ +||+ +| .|+ -+++.+.++.+...+-||=
T Consensus 98 la~~A~~~Gadavlv~~P~y~---~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 172 (303)
T 2wkj_A 98 LAASAKRYGFDAVSAVTPFYY---PFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALX 172 (303)
T ss_dssp HHHHHHHHTCSEEEEECCCSS---CCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHhCCCCEEEecCCCCC---CCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEe
Confidence 999999999999977533211 0000112466778888888 9986 45 344 5788888876543444443
No 308
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=95.84 E-value=0.063 Score=53.23 Aligned_cols=122 Identities=14% Similarity=0.283 Sum_probs=92.4
Q ss_pred EecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC-ChhhH
Q 013813 163 QFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NLQDT 241 (436)
Q Consensus 163 QL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~-~~~d~ 241 (436)
.+...+++++++.++...+|+..|-+..|-. . -.+.++++++..+..+.|-..-++ +.+++
T Consensus 129 ~~~~~~~e~~~~~a~~~~~g~~~~K~Kvg~~--------------~----d~~~v~avR~~~~~~l~vDaN~~~t~~~~A 190 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECAGLFNILKVKLGRD--------------N----DKEMIETIRSVTDLPIAVDANQGWKDRQYA 190 (338)
T ss_dssp BCCCCCHHHHHHHHHHHHTTCSSEEEECSSS--------------C----HHHHHHHHHTTCCCCEEEECTTCCCCHHHH
T ss_pred EEeCCCHHHHHHHHHHHHhcccEEEEecCcH--------------H----HHHHHHHHHhhcCCcEEEECcCCCCCHHHH
Confidence 3455789999888865444899999887631 1 245677888888777777777789 48899
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
.++++.+++.|+.+| ++... +-|++..+++++.+++||.+.=.+.+..++.+++ ..+|.|+
T Consensus 191 ~~~~~~l~~~~i~~i-------EeP~~---~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~ 251 (338)
T 3ijl_A 191 LDMIHWLKEKGIVMI-------EQPMP---KEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGIN 251 (338)
T ss_dssp HHHHHHHHHTTEEEE-------ECCSC---TTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEE
T ss_pred HHHHHHHhhCCCCEE-------ECCCC---CCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEE
Confidence 999999999987765 22111 3478889999999999999999999999988765 3677765
No 309
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.82 E-value=0.065 Score=51.41 Aligned_cols=183 Identities=13% Similarity=0.062 Sum_probs=114.7
Q ss_pred CCCCCcHHHHHHHHHhCCCeEEeCc--ccc-hhhccChhhh-h------hhhhccCCCCCEEEEe---cCCCHHHHHHHH
Q 013813 110 MVDNSELPFRMLCRRYGAEAAYTPM--LHS-RIFTESEKYR-N------EEFATCKEDRPLFVQF---CANDPEILLNAA 176 (436)
Q Consensus 110 M~gvtd~~fR~l~~~~Ga~l~~Tem--isa-~~l~~~~~~~-~------~~~~~~~~e~plivQL---~g~d~e~~~~AA 176 (436)
|.++=|..+-+++.+.|.+.+|+-- ++. .++....... . ..+.. -.+.|+++=+ +|+++ +..+.
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r-~~~~pviaD~~~Gyg~~~--~~~~~ 100 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITS-AVSIPVSVDVESGYGLSP--ADLIA 100 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHH-HCSSCEEEECTTCTTCCH--HHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHh-cCCCCEEeccCCCcCcHH--HHHHH
Confidence 7788899999999999999888662 321 1111110000 0 00111 1237888754 34555 44444
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc---cCccEEEEeccCC----------ChhhHHH
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN---LNVPVSCKIRVFP----------NLQDTIK 243 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~---~~iPVsVKiRlg~----------~~~d~~~ 243 (436)
++++.|+++|.|--+... -|..| -..+...+-|++++++ .++|+.|--|.+. ..+++++
T Consensus 101 ~l~~aGa~gv~iEd~~~~-------~~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ 172 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHS-------EGKRV-REAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIK 172 (255)
T ss_dssp HHHHTTCCEEEECSEEGG-------GTTEE-CCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCC-------CCCcc-cCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHH
Confidence 666789999999865411 02223 3455566666666554 2678666666531 1567788
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc--cCC----CCHHHHHHHHHhcCcceeeeeh
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN--GNV----RHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian--GGI----~s~eda~~~l~~tGaDgVmIGR 317 (436)
=++.++++|+|.|.+++.. +.+.++++.+.+++|+..+ ++- .+.+ ++-+ -|+..|..|-
T Consensus 173 ra~a~~eAGAd~i~~e~~~-----------~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~---eL~~-lGv~~v~~~~ 237 (255)
T 2qiw_A 173 RIKLMEQAGARSVYPVGLS-----------TAEQVERLVDAVSVPVNITAHPVDGHGAGDLA---TLAG-LGVRRVTFGP 237 (255)
T ss_dssp HHHHHHHHTCSEEEECCCC-----------SHHHHHHHHTTCSSCBEEECBTTTBBTTBCHH---HHHH-TTCCEEECTT
T ss_pred HHHHHHHcCCcEEEEcCCC-----------CHHHHHHHHHhCCCCEEEEecCCCCCCCCCHH---HHHH-cCCCEEEEHH
Confidence 8899999999999997642 3467889999999998776 333 3444 3333 4999999886
Q ss_pred H
Q 013813 318 S 318 (436)
Q Consensus 318 g 318 (436)
.
T Consensus 238 ~ 238 (255)
T 2qiw_A 238 L 238 (255)
T ss_dssp H
T ss_pred H
Confidence 5
No 310
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=95.82 E-value=0.022 Score=57.48 Aligned_cols=87 Identities=16% Similarity=0.207 Sum_probs=60.2
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccC---H-HHHHHHHhhCCCcEEEccCC---CC
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD---W-NAIKAVKNALRIPVLANGNV---RH 297 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad---~-~~i~~ik~~~~iPVianGGI---~s 297 (436)
+.++..-+......+ +..+.++..|+|++.+|-....+.....|..+ | +.|+.+++.+++||++=| | .+
T Consensus 144 ~~~~ianig~~~~~e---~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s 219 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQ---AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD 219 (365)
T ss_dssp -CCEEEEEETTSCHH---HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC
T ss_pred CCcEEEEeCCCCCHH---HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC
Confidence 566655544433322 56677788999999998665422111122333 3 788999999999999874 6 79
Q ss_pred HHHHHHHHHhcCcceeeee
Q 013813 298 MEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 298 ~eda~~~l~~tGaDgVmIG 316 (436)
.++++.+.+. |+|+|.++
T Consensus 220 ~e~A~~l~~a-Gad~I~V~ 237 (365)
T 3sr7_A 220 VKTIQTAIDL-GVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHH-TCCEEECC
T ss_pred HHHHHHHHHc-CCCEEEEe
Confidence 9999998886 99999883
No 311
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.82 E-value=0.14 Score=51.14 Aligned_cols=132 Identities=16% Similarity=0.065 Sum_probs=86.2
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~l 118 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLG----------SGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARETIEL 118 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 56667777754 567999998873 234444445566667777666554 589998842 2456889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHH-HhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCL-EETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l-~~tGaDgV 313 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++. +..++-||
T Consensus 119 a~~A~~~Gadavlv~~P~Y~---~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgi 191 (343)
T 2v9d_A 119 SQHAQQAGADGIVVINPYYW---KVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGI 191 (343)
T ss_dssp HHHHHHHTCSEEEEECCSSS---CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHhcCCCEEEECCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999977533211 00001124667788888899986 45 4345788888876 43334443
No 312
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.82 E-value=0.055 Score=54.97 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=73.2
Q ss_pred cccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEE-eccCcccccCC-CCCccCHHHHHH
Q 013813 203 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLA-VHGRTRDEKDG-KKFRADWNAIKA 280 (436)
Q Consensus 203 Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~-VHgRt~~~~~~-~~g~ad~~~i~~ 280 (436)
||..+.+.+++.+ +. .+++||.+|.-.+.+.++....++.+.+.|..-|+ +|..+.. ... .....|+..+..
T Consensus 232 gs~~~~n~~LL~~----~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~-yp~~~~~~ldl~~i~~ 305 (385)
T 3nvt_A 232 GARNMQNFELLKA----AG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRT-YEKATRNTLDISAVPI 305 (385)
T ss_dssp CGGGTTCHHHHHH----HH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCC-SCCSSSSBCCTTHHHH
T ss_pred CcccccCHHHHHH----HH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCCCccccCHHHHHH
Confidence 5677778765544 33 46899999966666788888889999999986554 4643432 111 122478999999
Q ss_pred HHhhCCCcEEEc----cCCCCH--HHHHHHHHhcCcceeeeeh
Q 013813 281 VKNALRIPVLAN----GNVRHM--EDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 281 ik~~~~iPVian----GGI~s~--eda~~~l~~tGaDgVmIGR 317 (436)
+++..++||+.. +|-+.. .-+..... .||||+||=+
T Consensus 306 lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA-~GA~gl~iE~ 347 (385)
T 3nvt_A 306 LKKETHLPVMVDVTHSTGRKDLLLPCAKAALA-IEADGVMAEV 347 (385)
T ss_dssp HHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHH-TTCSEEEEEB
T ss_pred HHHhcCCCEEEcCCCCCCccchHHHHHHHHHH-hCCCEEEEEe
Confidence 999889999664 232222 23445555 4999999874
No 313
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.80 E-value=0.64 Score=44.95 Aligned_cols=177 Identities=17% Similarity=0.191 Sum_probs=104.1
Q ss_pred CCCCCCCCchhHhHHHHHHHHHHhCCCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCc-ccch--hhccChhh-------
Q 013813 77 LPSPRGYLSGEARAERAWAHWTKLGRPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPM-LHSR--IFTESEKY------- 146 (436)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Tem-isa~--~l~~~~~~------- 146 (436)
++.+.++.+... +.-++.-|+ +|+ |.+.=|..+-+++.+.|.+.+.|.- +..- ++......
T Consensus 9 ~~~~~~~~t~~~-----lr~~~~~g~-~i~---m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~ 79 (275)
T 3vav_A 9 QESSRPAVTVPK-----LQAMREAGE-KIA---MLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAY 79 (275)
T ss_dssp ----CCCCCHHH-----HHHHHHHTC-CEE---EEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHH
T ss_pred CccccCCcCHHH-----HHHHHHCCC-cEE---EEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHH
Confidence 345556666643 222333333 443 5678899999999999999876652 2111 11111000
Q ss_pred hhhhhhccCCCCCEEEEec-C--CCHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhc
Q 013813 147 RNEEFATCKEDRPLFVQFC-A--NDPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAL 222 (436)
Q Consensus 147 ~~~~~~~~~~e~plivQL~-g--~d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~ 222 (436)
....+...-...|+++=+= | .++++..+.+ ++++.|+++|.|--| ....+.|+++.+
T Consensus 80 h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~ 140 (275)
T 3vav_A 80 HTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGG-------------------EWLAETVRFLVE 140 (275)
T ss_dssp HHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECC-------------------GGGHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCc-------------------hhHHHHHHHHHH
Confidence 0011222233467777764 2 4777776666 566779999999833 123444555543
Q ss_pred ccCccEEEEecc--------------CCC---hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC
Q 013813 223 NLNVPVSCKIRV--------------FPN---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL 285 (436)
Q Consensus 223 ~~~iPVsVKiRl--------------g~~---~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~ 285 (436)
.++||.--+.+ |.+ .+++++=|+.++++|++.|.+-+-. . +.+++|.+.+
T Consensus 141 -~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~vp----------~--~~a~~It~~l 207 (275)
T 3vav_A 141 -RAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAVP----------T--LVAAEVTREL 207 (275)
T ss_dssp -TTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESCC----------H--HHHHHHHHHC
T ss_pred -CCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCCC----------H--HHHHHHHHhC
Confidence 36777643322 222 2356677888999999999886542 1 3578899999
Q ss_pred CCcEEEccC
Q 013813 286 RIPVLANGN 294 (436)
Q Consensus 286 ~iPVianGG 294 (436)
++|+|+.|.
T Consensus 208 ~iP~igIGa 216 (275)
T 3vav_A 208 SIPTIGIGA 216 (275)
T ss_dssp SSCEEEESS
T ss_pred CCCEEEEcc
Confidence 999998873
No 314
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.80 E-value=0.21 Score=48.59 Aligned_cols=134 Identities=14% Similarity=0.070 Sum_probs=89.2
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++ +++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 90 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFG----------TTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDAADQ 90 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHHHHH
Confidence 5666777775 4567999998883 244444456666678888777666 489998843 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC---CCcEE-Ec-----cCCCCHHHHHHHH-HhcC-ccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL---RIPVL-AN-----GNVRHMEDVQKCL-EETG-CEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~---~iPVi-an-----GGI~s~eda~~~l-~~tG-aDgV 313 (436)
++.++++|+|++.+..-..... .+...-+++.+.|.+.+ ++||+ +| |---+++.+.++. +..+ +-||
T Consensus 91 a~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgi 168 (294)
T 3b4u_A 91 SAEALNAGARNILLAPPSYFKN--VSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGV 168 (294)
T ss_dssp HHHHHHTTCSEEEECCCCSSCS--CCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEE
T ss_pred HHHHHhcCCCEEEEcCCcCCCC--CCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEE
Confidence 9999999999997753321100 01111256678888888 89986 45 4345788888877 4433 4444
Q ss_pred e
Q 013813 314 L 314 (436)
Q Consensus 314 m 314 (436)
=
T Consensus 169 K 169 (294)
T 3b4u_A 169 K 169 (294)
T ss_dssp E
T ss_pred E
Confidence 3
No 315
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.79 E-value=0.03 Score=54.24 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+..++|+.++++|+++|.|..- +.. +. -..+.+..+++.+++||+..+.|.+..++.++... |||+|.++-.
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd---~~~-f~--Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~-GAD~VlLi~a 151 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTD---TPS-FQ--GAPEFLTAARQACSLPALRKDFLFDPYQVYEARSW-GADCILIIMA 151 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECC---STT-TC--CCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHT-TCSEEEEETT
T ss_pred CCHHHHHHHHHHCCCCEEEEecc---ccc-cC--CCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHc-CCCEEEEccc
Confidence 47789999999999999977431 111 11 24678899999999999999999999999998875 9999999987
Q ss_pred Hhh
Q 013813 319 LLE 321 (436)
Q Consensus 319 al~ 321 (436)
++.
T Consensus 152 ~L~ 154 (272)
T 3tsm_A 152 SVD 154 (272)
T ss_dssp TSC
T ss_pred ccC
Confidence 764
No 316
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.78 E-value=0.083 Score=49.12 Aligned_cols=130 Identities=10% Similarity=0.112 Sum_probs=76.5
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCAND-PEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d-~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.++++=+=-.| ++....+++.+ +.|+|.|.+|. +++ .+.+..+++... ..-+.|-+-.
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~-----------~~G-----~~~l~~~~~~~~---~~~~~V~~lt 118 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHS-----------CAG-----YESVERALSATD---KHVFVVVKLT 118 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEG-----------GGC-----HHHHHHHHHHCS---SEEEEECCCT
T ss_pred CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEec-----------cCC-----HHHHHHHHHhcC---CCeEEEEEeC
Confidence 567777774443 45556666555 45899999994 222 122333333321 1112232211
Q ss_pred C--CCh-hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHH---H------HH
Q 013813 235 F--PNL-QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME---D------VQ 302 (436)
Q Consensus 235 g--~~~-~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~e---d------a~ 302 (436)
. ... +.....++. .+.|++ ++..+ +.++.+++..+.+ +..+||.--. | ..
T Consensus 119 s~~~~l~~~v~~~a~~-~e~G~d-vV~~~---------------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~ 180 (213)
T 1vqt_A 119 SMEGSLEDYMDRIEKL-NKLGCD-FVLPG---------------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLE 180 (213)
T ss_dssp TSCCCHHHHHHHHHHH-HHHTCE-EECCH---------------HHHHHHTTTCCSC-EEECCBC---------CCBCHH
T ss_pred CCCHHHHHHHHHHHHH-hcCCCE-EEEcH---------------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHH
Confidence 1 112 455677888 999998 43321 3467777777667 8888886432 2 46
Q ss_pred HHHHhcCcceeeeehHHhhCCcc
Q 013813 303 KCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 303 ~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+ ++. |+|++.+||+++..++-
T Consensus 181 ~-i~a-Gad~iVvGR~I~~a~dP 201 (213)
T 1vqt_A 181 E-MKG-IANFAVLGREIYLSENP 201 (213)
T ss_dssp H-HTT-TCSEEEESHHHHTSSCH
T ss_pred H-HHC-CCCEEEEChhhcCCCCH
Confidence 6 665 99999999999877663
No 317
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.74 E-value=0.14 Score=49.93 Aligned_cols=131 Identities=17% Similarity=0.118 Sum_probs=85.9
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~~~t~~ai~ 93 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVG----------TTGESATLSVEEHTAVIEAVVKHVAKRVPVIAG--TGANNTVEAIA 93 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe--CCCcCHHHHHH
Confidence 56667777754 567999998883 234444445566666777666554 4899998 44 46789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
+++.++++|+|++.+..-.... .+..--+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||
T Consensus 94 la~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 166 (297)
T 3flu_A 94 LSQAAEKAGADYTLSVVPYYNK---PSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV 166 (297)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEE
Confidence 9999999999999775332110 0001125667888888899986 44 555677877776643333333
No 318
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.74 E-value=0.2 Score=49.13 Aligned_cols=136 Identities=12% Similarity=0.041 Sum_probs=87.9
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 95 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILA----------NFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQVCAAR 95 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHHHHHH
Confidence 56777777754 577999998873 234444445666667777666654 589999942 2467889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec----cCCCCHHHHHHHHH-hcCcceee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNVRHMEDVQKCLE-ETGCEGVL 314 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an----GGI~s~eda~~~l~-~tGaDgVm 314 (436)
++.++++|+|++.+..-........+...-+++.+.|.+.+++||+ +| |---+++.+.++.+ ..++-||=
T Consensus 96 a~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~pnIvgiK 171 (309)
T 3fkr_A 96 SLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQVAYFX 171 (309)
T ss_dssp HHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHSTTEEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCCCEEEEE
Confidence 9999999999997754221000000111225667888888899976 44 55567888888775 33444443
No 319
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=95.71 E-value=0.095 Score=51.05 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=72.6
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCC-ccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g-~ad~~~i~~ 280 (436)
.||..+++.++++++ . .+++||.+|--...+.++....++.+.+.|.+.|++.-|... +++.. ..|+..+..
T Consensus 116 IgA~~~~n~~LLr~v----a-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~--y~~~~~~vdl~~i~~ 188 (285)
T 3sz8_A 116 VPAFLARQTDLVVAI----A-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS--FGYDNLVVDMLGFRQ 188 (285)
T ss_dssp ECGGGTTCHHHHHHH----H-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE--CSSSCEECCTTHHHH
T ss_pred ECccccCCHHHHHHH----H-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC--CCCCcCccCHHHHHH
Confidence 477888888866554 3 368999999555457778888888899999877766333332 22322 268999999
Q ss_pred HHhhC-CCcEEEc---------------cCCCC--HHHHHHHHHhcCcceeeeeh
Q 013813 281 VKNAL-RIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 281 ik~~~-~iPVian---------------GGI~s--~eda~~~l~~tGaDgVmIGR 317 (436)
+++.. ++||++. ||-+. ..-+...+.. ||||++|=.
T Consensus 189 lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~-GA~gl~IE~ 242 (285)
T 3sz8_A 189 MAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAV-GIAGLFLEA 242 (285)
T ss_dssp HHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHH-CCSEEEEEE
T ss_pred HHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHh-CCCEEEEEe
Confidence 99988 5999983 23221 2234455554 999998863
No 320
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.71 E-value=0.14 Score=50.18 Aligned_cols=132 Identities=14% Similarity=0.060 Sum_probs=84.8
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++ .++.|+|+|=++. .-|-+..-..+.=.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ai~l 103 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAG----------TTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTSVEL 103 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHHHHH
Confidence 5666777775 4567999998873 234444445555566676666554 489998842 2366889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||
T Consensus 104 a~~A~~~Gadavlv~~P~y~---~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 175 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYS---KPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAV 175 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSS---CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEE
T ss_pred HHHHHhcCCCEEEECCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEE
Confidence 99999999999977532211 00001124667788888899986 45 433578888777543333333
No 321
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.69 E-value=0.15 Score=49.63 Aligned_cols=132 Identities=12% Similarity=0.083 Sum_probs=86.4
Q ss_pred CHHHHHHHHH-HHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHH
Q 013813 168 DPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~-~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~ 243 (436)
|.+.+.+-++ .++ .|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..++++
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 90 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGG----------STGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKEAVE 90 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHH
Confidence 5666777775 457 7999998873 234444445666667777666554 589998842 235688999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
+++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||
T Consensus 91 la~~a~~~Gadavlv~~P~y~---~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 163 (293)
T 1f6k_A 91 LGKYATELGYDCLSAVTPFYY---KFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGV 163 (293)
T ss_dssp HHHHHHHHTCSEEEEECCCSS---CCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHhcCCCEEEECCCCCC---CCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEE
Confidence 999999999999977533211 00001124667788888899986 45 333578888887654344444
No 322
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=95.68 E-value=0.046 Score=54.13 Aligned_cols=129 Identities=14% Similarity=0.203 Sum_probs=81.7
Q ss_pred EEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCCh
Q 013813 161 FVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNL 238 (436)
Q Consensus 161 ivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~ 238 (436)
...+...+++++.+.++ +.|+..+-+..|.+ |..+..+ .+.++++++.+ ++.+.|-..-+++.
T Consensus 73 ~~ti~~~~~e~~~~~~~--~~G~~~~KiKvg~~---------g~~~~~d----~~~v~avR~~~G~~~~L~vDaN~~w~~ 137 (327)
T 2opj_A 73 NATVPAVGPEEAARIVA--SSGCTTAKVKVAER---------GQSEAND----VARVEAVRDALGPRGRVRIDVNGAWDV 137 (327)
T ss_dssp CEEECSCCHHHHHHHHH--HHCCSEEEEECCC---------------CH----HHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred eEEeCCCCHHHHHHHHH--HCCCCEEEEEeCCC---------CCCHHHH----HHHHHHHHHHhCCCCEEEEECCCCCCH
Confidence 33455567887655444 56999999987643 1122222 45566666665 46777777778999
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
++++++++.+++.|+.+| ++. . .+++..+++++.+++||.+.=.+.+..++.++++...+|.|.+=
T Consensus 138 ~~A~~~~~~L~~~~l~~i-------EqP--~---~~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik 203 (327)
T 2opj_A 138 DTAVRMIRLLDRFELEYV-------EQP--C---ATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLK 203 (327)
T ss_dssp HHHHHHHHHHGGGCEEEE-------ECC--S---SSHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEEC
T ss_pred HHHHHHHHHHHhcCCcEE-------eCC--C---CCHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeC
Confidence 999999999999887765 221 1 25778889999999999999999999999998887778888764
No 323
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.67 E-value=0.15 Score=50.13 Aligned_cols=132 Identities=17% Similarity=0.129 Sum_probs=87.4
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~~st~~ai~ 108 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVG----------TTGESPTLTHEEHKRIIELCVEQVAKRVPVVAG--AGSNSTSEAVE 108 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEe--CCCCCHHHHHH
Confidence 56677777754 567999997763 234444445555566676666554 5899998 44 46789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHH-hcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE-ETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~-~tGaDgVm 314 (436)
+++.++++|+|++.+..-.... .. ...-+++.+.|.+.+++||+ +| |---+++.+.++.+ ..++-||=
T Consensus 109 la~~A~~~Gadavlv~~P~y~~-~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK 183 (315)
T 3si9_A 109 LAKHAEKAGADAVLVVTPYYNR-PN--QRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVK 183 (315)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC-CC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHhcCCCEEEECCCCCCC-CC--HHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEE
Confidence 9999999999999775432110 00 01125667888888899986 44 55567888888776 33444443
No 324
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.66 E-value=0.13 Score=48.72 Aligned_cols=145 Identities=14% Similarity=0.130 Sum_probs=86.3
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcC-C--CcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc-cCccEEEEec
Q 013813 158 RPLFVQFCANDPEILLNAARRVEP-Y--CDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-LNVPVSCKIR 233 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~-g--~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~-~~iPVsVKiR 233 (436)
.|+++.+ |+..+.++.+.++. + ++.+++|+.. | ..+=.++++.+++. ..+++-+|+
T Consensus 15 ~~~ilal---D~~~l~~~~~~~~~~~~~v~~~Kv~~d~---------~-------~~~G~~~v~~lr~~~~~v~lD~kl- 74 (245)
T 1eix_A 15 SPVVVAL---DYHNRDDALAFVDKIDPRDCRLKVGKEM---------F-------TLFGPQFVRELQQRGFDIFLDLKF- 74 (245)
T ss_dssp CCEEEEE---CCSSHHHHHHHHTTSCTTTCEEEEEHHH---------H-------HHHHHHHHHHHHHTTCCEEEEEEE-
T ss_pred CCeEEEE---CCCCHHHHHHHHHHhCccCcEEEEcHHH---------H-------HHhCHHHHHHHHHCCCcEEEEeec-
Confidence 4677655 44445566666654 4 7899998643 0 12223466677765 567888884
Q ss_pred cCCChhhHHHHHHHHHHcCccEEEeccCcccc----------cCCC--C---------Cc--cCH----------HH---
Q 013813 234 VFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDE----------KDGK--K---------FR--ADW----------NA--- 277 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~----------~~~~--~---------g~--ad~----------~~--- 277 (436)
.........+++.+.++|+|.|+||+-.... ..+. . .. .++ +.
T Consensus 75 -~Dip~t~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~Vl~ 153 (245)
T 1eix_A 75 -HDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAER 153 (245)
T ss_dssp -CSCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHHHHH
T ss_pred -cccHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHHHHH
Confidence 4332333457888889999999998522100 0000 0 00 000 11
Q ss_pred -------------------HHHHHhhC-CCcEEEccCCCCHH----------HHHHHHHhcCcceeeeehHHhhCCc
Q 013813 278 -------------------IKAVKNAL-RIPVLANGNVRHME----------DVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 278 -------------------i~~ik~~~-~iPVianGGI~s~e----------da~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++++++.. +.+++..|||+.-. .+.++++. |+|.+.+||+++..++
T Consensus 154 ma~~~~~~G~~g~V~~~~ei~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~a-Gad~iVvGr~I~~a~d 229 (245)
T 1eix_A 154 LAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSA-GVDYMVIGRPVTQSVD 229 (245)
T ss_dssp HHHHHHHTTCSEEECCGGGHHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHT-TCSEEEECHHHHTSSS
T ss_pred HHHHHHHcCCCeEEeCHHHHHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHc-CCCEEEECHHHcCCCC
Confidence 33344433 36799999998421 46666765 9999999999998665
No 325
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.64 E-value=0.19 Score=49.06 Aligned_cols=134 Identities=18% Similarity=0.143 Sum_probs=89.3
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc---CccEEEEeccC-CChhhHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL---NVPVSCKIRVF-PNLQDTI 242 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~---~iPVsVKiRlg-~~~~d~~ 242 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..+++
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG--vg~~~t~~ai 93 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVG----------TTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG--AGSNATHEAV 93 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE--CCCSSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe--CCCCCHHHHH
Confidence 56677777754 567999998773 234444445555566666665554 4799988 44 4678999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHh-cCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE-TGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~-tGaDgVmI 315 (436)
++++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++.+. .++-||=-
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKd 170 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNK---PTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKE 170 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999775432110 0001125667888888999986 44 556678888888765 45555543
Q ss_pred e
Q 013813 316 A 316 (436)
Q Consensus 316 G 316 (436)
.
T Consensus 171 s 171 (301)
T 3m5v_A 171 A 171 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 326
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=95.64 E-value=0.056 Score=52.55 Aligned_cols=110 Identities=18% Similarity=0.185 Sum_probs=71.9
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCC-CccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-g~ad~~~i~~ 280 (436)
.||..+++.++++++ . .+++||.+|.-...+.++....+..+...|...+++.-|+.. +++. ...|+..+..
T Consensus 111 Iga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~--~~~~~~~~dl~~i~~ 183 (280)
T 2qkf_A 111 LPAFLARQTDLVVAM----A-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSS--FGYDNLVVDMLGFGV 183 (280)
T ss_dssp ECGGGTTBHHHHHHH----H-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE--CSTTCEECCTTHHHH
T ss_pred ECcccccCHHHHHHH----H-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHHH
Confidence 578888888865554 2 468999999555457788888888899999866655444432 2221 1268888999
Q ss_pred HHhhC-CCcEEEc-----------cCCCCH------HHHHHHHHhcCcceeeeehHH
Q 013813 281 VKNAL-RIPVLAN-----------GNVRHM------EDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 281 ik~~~-~iPVian-----------GGI~s~------eda~~~l~~tGaDgVmIGRga 319 (436)
+++.. ++||+.. |+-... .-+.... ..|+||+||=+=+
T Consensus 184 lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aav-a~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 184 MKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGM-ATRLAGLFLESHP 239 (280)
T ss_dssp HHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHH-TTCCSEEEEEC--
T ss_pred HHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHH-HcCCCEEEEeecC
Confidence 99887 8999983 222211 2233334 4599999987543
No 327
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.64 E-value=0.15 Score=50.11 Aligned_cols=132 Identities=10% Similarity=0.087 Sum_probs=87.3
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaG--vg~~st~eai~ 109 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVG----------TTGESATLDVEEHIQVIRRVVDQVKGRIPVIAG--TGANSTREAVA 109 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--CCCcCHHHHHH
Confidence 66777777764 467999998873 234444445566666666665554 4899997 44 35789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++|+|++.+..-.... .+..--+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||=
T Consensus 110 la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 183 (314)
T 3qze_A 110 LTEAAKSGGADACLLVTPYYNK---PTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIK 183 (314)
T ss_dssp HHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEE
Confidence 9999999999999775432110 0001125667888888899986 44 5566788888776543444443
No 328
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=95.56 E-value=0.11 Score=54.16 Aligned_cols=124 Identities=13% Similarity=0.074 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHH-HHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAAR-RVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~-~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~ 242 (436)
+.+++++++.|+ .++ .||..|-|..|.+ +++.-.+.|+++++.. ++.+.|-..-+++..+++
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai 262 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAWSLNEAI 262 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHH
Confidence 467899888885 456 5999999987642 1233345566676665 567777777788989999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccC----HHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad----~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
.+++.+++. +.+| ++... +-| ++..+++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 263 ~~~~~Le~~-l~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~ 328 (470)
T 3p0w_A 263 ALCKGQGHL-VAYA-------EDPCG---PEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLA 328 (470)
T ss_dssp HHHTTCTTT-CSEE-------ESCBC---CBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBC
T ss_pred HHHHhcccc-ceee-------cCCCC---hhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 999988876 6554 22111 223 57789999999999998767889999999999877887754
No 329
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.52 E-value=0.18 Score=48.91 Aligned_cols=132 Identities=13% Similarity=0.082 Sum_probs=85.5
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~l 89 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNG----------TTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKSIQA 89 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHH
Confidence 55667777754 567999998873 234444444555566666665554 589999842 2467889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++.+...+-||
T Consensus 90 a~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 161 (292)
T 3daq_A 90 SIQAKALGADAIMLITPYYNK---TNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVAL 161 (292)
T ss_dssp HHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEE
Confidence 999999999999775322110 0001124667788888899986 44 556678888877654334343
No 330
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.51 E-value=0.084 Score=51.74 Aligned_cols=107 Identities=20% Similarity=0.202 Sum_probs=73.0
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCC-ccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g-~ad~~~i~~ 280 (436)
.||..+++.++++++ . .+++||.+|--...+.++....++.+.+.|.+.|++--|... +++.. ..|+..+..
T Consensus 137 IgA~~~~n~~LLr~v----a-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~--y~~~~~~vdl~~i~~ 209 (298)
T 3fs2_A 137 IPAFLCRQTDLLIAA----A-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVS--FGYNTLVSDMRALPI 209 (298)
T ss_dssp ECGGGTTCHHHHHHH----H-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEE--CSSSCEECCTTHHHH
T ss_pred ECccccCCHHHHHHH----H-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCCCccCHHHHHH
Confidence 477888888866553 3 468999999555457788888889999999887766334332 22322 268999999
Q ss_pred HHhhCCCcEEEc---------------cCCCC--HHHHHHHHHhcCcceeeeeh
Q 013813 281 VKNALRIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 281 ik~~~~iPVian---------------GGI~s--~eda~~~l~~tGaDgVmIGR 317 (436)
+++ .++||++. ||.+. ..-+...+.. ||||++|=.
T Consensus 210 lk~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAl-GAdGl~IE~ 261 (298)
T 3fs2_A 210 MAG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAV-GVAGFFIET 261 (298)
T ss_dssp HHT-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHH-CCSEEEEEE
T ss_pred HHH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHc-CCCEEEEEe
Confidence 998 79999983 33221 1234455554 999999863
No 331
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.51 E-value=0.12 Score=50.13 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=83.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~l 88 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVG----------TTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEAISL 88 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHH
Confidence 56667777754 466999998883 234444445566666777666554 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHh
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE 307 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~ 307 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+.
T Consensus 89 a~~a~~~Gadavlv~~P~y~---~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (292)
T 2ojp_A 89 TQRFNDSGIVGCLTVTPYYN---RPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKV 154 (292)
T ss_dssp HHHTTTSSCSEEEEECCCSS---CCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTS
T ss_pred HHHHHhcCCCEEEECCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcC
Confidence 99999999999977533211 00001124667788888899986 45 334578888887643
No 332
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.49 E-value=0.21 Score=45.39 Aligned_cols=129 Identities=17% Similarity=0.154 Sum_probs=77.5
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc-cCccEEEEeccCCCh
Q 013813 160 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN-LNVPVSCKIRVFPNL 238 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~-~~iPVsVKiRlg~~~ 238 (436)
|++.+=-.+.++..+.++.+..|+|.|++.. |.. .. +| .++++++++. .++||.+-.-+...
T Consensus 3 li~a~D~~~~~~~~~~~~~~~~~~diie~G~--p~~--~~--~g----------~~~i~~ir~~~~~~~i~~~~~~~~~- 65 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVVDDVDIIEVGT--PFL--IR--EG----------VNAIKAIKEKYPHKEVLADAKIMDG- 65 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHGGGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEECSC-
T ss_pred EEEEeCCCCHHHHHHHHHHhhcCccEEEeCc--HHH--Hh--cc----------HHHHHHHHHhCCCCEEEEEEEeccc-
Confidence 3444444567777777766666789999876 442 11 12 2567777766 47887653222211
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCH-HHHHHHHhhCCCcEEEc-cCCCCH-HHHHHHHHhcCcceeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPVLAN-GNVRHM-EDVQKCLEETGCEGVLS 315 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~-~~i~~ik~~~~iPVian-GGI~s~-eda~~~l~~tGaDgVmI 315 (436)
...+++.+.++|+|+|++|+-... .+. +.++.+++ .+++++.. =+..++ +.++.+.+. |+|.|.+
T Consensus 66 --~~~~~~~~~~~Gad~v~v~~~~~~--------~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v 133 (211)
T 3f4w_A 66 --GHFESQLLFDAGADYVTVLGVTDV--------LTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLEEA-GADMLAV 133 (211)
T ss_dssp --HHHHHHHHHHTTCSEEEEETTSCH--------HHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEE
T ss_pred --hHHHHHHHHhcCCCEEEEeCCCCh--------hHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEE
Confidence 123588889999999999976321 122 33444444 36666642 345665 556676665 9999877
Q ss_pred eh
Q 013813 316 AE 317 (436)
Q Consensus 316 GR 317 (436)
..
T Consensus 134 ~~ 135 (211)
T 3f4w_A 134 HT 135 (211)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 333
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.48 E-value=0.08 Score=52.55 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=62.6
Q ss_pred ccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCcc----CHHHHHHHHhhCCCcEEEc--cCCC
Q 013813 223 NLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA----DWNAIKAVKNALRIPVLAN--GNVR 296 (436)
Q Consensus 223 ~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~a----d~~~i~~ik~~~~iPVian--GGI~ 296 (436)
..+.|+.+.+..+.+.+. +.+.++.+|+|+|.+|.....+.....+.. .++.++.+++.+++||+.- |...
T Consensus 114 ~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~ 190 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGM 190 (349)
T ss_dssp CSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCC
T ss_pred CCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 457899988776555443 456677899999999865432211111111 2578999999899999875 5557
Q ss_pred CHHHHHHHHHhcCcceeeee
Q 013813 297 HMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 297 s~eda~~~l~~tGaDgVmIG 316 (436)
+.++++.+.+. |+|+|.+.
T Consensus 191 ~~~~a~~a~~~-Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASAGKLYEA-GAAAVDIG 209 (349)
T ss_dssp CHHHHHHHHHH-TCSEEEEE
T ss_pred CHHHHHHHHHc-CCCEEEEc
Confidence 89999888875 99999884
No 334
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=95.46 E-value=0.17 Score=52.21 Aligned_cols=124 Identities=13% Similarity=0.115 Sum_probs=90.5
Q ss_pred CCCHHHHHHHHHH-Hc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHH
Q 013813 166 ANDPEILLNAARR-VE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~~-v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~ 242 (436)
+.+++++++.|+. ++ .||..|-|..|.+ +++.-.+.|+++++.. ++.+.|-..-+++..+++
T Consensus 180 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~ 244 (450)
T 3mzn_A 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWKLDEAV 244 (450)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 3578998888864 55 4999999987642 1233345566776665 567777777788999999
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccC----HHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad----~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
.+++.+++. +.+| ++... +-| ++..+++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 245 ~~~~~L~~~-i~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 310 (450)
T 3mzn_A 245 RVLEPIKHL-LSYA-------EDPCG---QEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLA 310 (450)
T ss_dssp HHHGGGGGG-CSEE-------ESSBC---CBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBC
T ss_pred HHHHHhhhc-ccee-------eCCCC---cccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 999999887 6655 22111 123 67789999999999988767889999999999877887754
No 335
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.46 E-value=0.031 Score=54.85 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=61.8
Q ss_pred HHHHHHHHHcCccEEEecc-CcccccCCC--CCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 242 IKYAKMLEDAGCSLLAVHG-RTRDEKDGK--KFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHg-Rt~~~~~~~--~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+.|+..+++|++.|.+-- .+.+..... ....+.+.++++++.+++||++-+++...++++.+.+ .|||.| -...
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~a-aGAD~I-d~s~ 108 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILEE-LKVDML-DESE 108 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHH-TTCSEE-EEET
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHH-cCCCEE-EcCC
Confidence 3779999999999998762 212211111 1134789999999999999999988988888888776 599999 3323
Q ss_pred HhhCCccchhhhh
Q 013813 319 LLENPALFAGFRT 331 (436)
Q Consensus 319 al~nP~lf~~i~~ 331 (436)
.+..+.+...++.
T Consensus 109 ~~~~~~li~~i~~ 121 (297)
T 4adt_A 109 VLTMADEYNHINK 121 (297)
T ss_dssp TSCCSCSSCCCCG
T ss_pred CCCHHHHHHHHHh
Confidence 3456677766654
No 336
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.40 E-value=0.34 Score=47.40 Aligned_cols=133 Identities=14% Similarity=0.036 Sum_probs=87.8
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+- .| .+..++++
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG--vg~~~t~~ai~ 100 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQG----------SNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAG--SGCESTQATVE 100 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHcCCCCcEEEe--cCCCCHHHHHH
Confidence 55667776754 456999998873 345444455666677888877766 5899887 44 46788999
Q ss_pred HHHHHHHcCccEEEeccCcc-cccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTR-DEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~-~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++|+|++.+..-.. ..+.. ...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||=
T Consensus 101 la~~A~~~Gadavlv~~P~y~~~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 176 (307)
T 3s5o_A 101 MTVSMAQVGADAAMVVTPCYYRGRMS--SAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMX 176 (307)
T ss_dssp HHHHHHHTTCSEEEEECCCTTGGGCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCC--HHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEE
Confidence 99999999999997753221 10000 01225667888888899986 44 3345778887776543444443
No 337
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.38 E-value=0.097 Score=50.86 Aligned_cols=126 Identities=17% Similarity=0.121 Sum_probs=79.0
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. .-|-+..-..+.-.++++.+.+.+ .+||.+.+- +.+..+++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ai~l 88 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCG----------TTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAASIAM 88 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHH
Confidence 56667777754 567999998883 234444445556666777665544 489998842 2356889999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHh
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEE 307 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~ 307 (436)
++.++++|+|++.+..-... ..+...-+++.+.|.+.+++||+ +| |---+++.+.++.+.
T Consensus 89 a~~a~~~Gadavlv~~P~y~---~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (291)
T 3a5f_A 89 SKWAESIGVDGLLVITPYYN---KTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCED 154 (291)
T ss_dssp HHHHHHTTCSEEEEECCCSS---CCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTS
T ss_pred HHHHHhcCCCEEEEcCCCCC---CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcC
Confidence 99999999999977532211 00001113445566667788875 44 444577777776543
No 338
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.37 E-value=0.18 Score=48.92 Aligned_cols=132 Identities=13% Similarity=0.122 Sum_probs=85.9
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG--vg~~~t~~ai~ 87 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVG----------TTGEASTLSMEEHTQVIKEIIRVANKRIPIIAG--TGANSTREAIE 87 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCeEEEe--CCCCCHHHHHH
Confidence 56667777754 467999997773 234333344555566776666554 4899988 44 46789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgVm 314 (436)
+++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-||=
T Consensus 88 la~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (291)
T 3tak_A 88 LTKAAKDLGADAALLVTPYYNK---PTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIK 161 (291)
T ss_dssp HHHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 9999999999999775332110 0001125667888888899986 43 5556778877766433444443
No 339
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.36 E-value=0.037 Score=53.58 Aligned_cols=79 Identities=23% Similarity=0.330 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
.+..++|+.+++.|+++|.|.--.. .+.| ..+.++.+++.+++||+..+.|.+..++.++... |||+|.++-+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~----~f~G--s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~-GAD~VlLi~a 144 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQR----RFQG--SLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAH-GADMLLLIVA 144 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGG----GHHH--HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHT-TCSEEEEEGG
T ss_pred CCHHHHHHHHHHcCCCEEEEecChh----hcCC--CHHHHHHHHHhCCCCEEECccccCHHHHHHHHHc-CCCEEEEecc
Confidence 4678899999999999998752211 0111 3577899999999999999999999999998875 9999999988
Q ss_pred HhhCCc
Q 013813 319 LLENPA 324 (436)
Q Consensus 319 al~nP~ 324 (436)
.+.+..
T Consensus 145 ~l~~~~ 150 (272)
T 3qja_A 145 ALEQSV 150 (272)
T ss_dssp GSCHHH
T ss_pred cCCHHH
Confidence 776443
No 340
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=95.36 E-value=0.08 Score=51.60 Aligned_cols=90 Identities=21% Similarity=0.331 Sum_probs=59.0
Q ss_pred HHHHHHhcccC--ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE
Q 013813 215 SLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 290 (436)
Q Consensus 215 eIv~av~~~~~--iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi 290 (436)
+.++.+++..+ ++|.|=++ +.++ ++.+.++|+|+|.++.-+. +.++++.+.+ ++|++
T Consensus 184 ~av~~ar~~~~~~~~IgVev~---t~ee----a~eA~~aGaD~I~ld~~~~------------~~~k~av~~v~~~ipi~ 244 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEVEVR---SLEE----LEEALEAGADLILLDNFPL------------EALREAVRRVGGRVPLE 244 (286)
T ss_dssp HHHHHHHHHSCTTSCEEEEES---SHHH----HHHHHHHTCSEEEEESCCH------------HHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHhCCCCCEEEEEeC---CHHH----HHHHHHcCCCEEEECCCCH------------HHHHHHHHHhCCCCeEE
Confidence 34555555542 34555321 2233 4455678999998876432 2344444433 69999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+.|||+ .+.+.++.+ +|+|+|.+|.....-|++
T Consensus 245 AsGGIt-~eni~~~a~-tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 245 ASGNMT-LERAKAAAE-AGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp EESSCC-HHHHHHHHH-HTCSEEECTHHHHSCCCC
T ss_pred EEcCCC-HHHHHHHHH-cCCCEEEEcHHHcCCCce
Confidence 999996 899999887 599999998766655553
No 341
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.34 E-value=0.66 Score=42.76 Aligned_cols=173 Identities=14% Similarity=0.028 Sum_probs=98.3
Q ss_pred CCCCcHHHHHHHHHhCCCeEEeCcc-cchhhccChhhhhhhhhccCCCCCEEEEecC-CCHHHHHHHHHHHcCCCcEEEE
Q 013813 111 VDNSELPFRMLCRRYGAEAAYTPML-HSRIFTESEKYRNEEFATCKEDRPLFVQFCA-NDPEILLNAARRVEPYCDYVDI 188 (436)
Q Consensus 111 ~gvtd~~fR~l~~~~Ga~l~~Temi-sa~~l~~~~~~~~~~~~~~~~e~plivQL~g-~d~e~~~~AA~~v~~g~D~IdL 188 (436)
-|.|+..=-..+.+.|+|++---+. .+..... ........... +.....|-++- .+++.+.+.++. .+.|.|.|
T Consensus 6 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~-~~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~--~~ld~vQL 81 (203)
T 1v5x_A 6 CGITRLEDALLAEALGAFALGFVLAPGSRRRIA-PEAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEE--ARLQVAQL 81 (203)
T ss_dssp CCCCCHHHHHHHHHHTCSEEEEECCTTCTTBCC-HHHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHH--TTCSEEEE
T ss_pred cCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCC-HHHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHh--hCCCEEEE
Confidence 3566665557788899986432232 1211111 11111111111 22334455555 456665555543 36799999
Q ss_pred ecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCC
Q 013813 189 NLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG 268 (436)
Q Consensus 189 N~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~ 268 (436)
|- . .+++.+.++ .. ++|+.--++.... .+ + .+.+..+|++.+.... +
T Consensus 82 HG-------------~---e~~~~~~~l----~~--~~~vika~~v~~~-~~---l--~~~~~~~d~~LlD~~~-----g 128 (203)
T 1v5x_A 82 HG-------------E---EPPEWAEAV----GR--FYPVIKAFPLEGP-AR---P--EWADYPAQALLLDGKR-----P 128 (203)
T ss_dssp CS-------------C---CCHHHHHHH----TT--TSCEEEEEECSSS-CC---G--GGGGSSCSEEEEECSS-----T
T ss_pred CC-------------C---CCHHHHHHh----cc--CCCEEEEEEcCCh-Hh---h--hhhhcCCCEEEEcCCC-----C
Confidence 92 1 245555443 21 5777766666432 11 1 1233338999886543 1
Q ss_pred CCC-ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 269 KKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 269 ~~g-~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
++| ..||+.++.+. ..+.|++..||++ ++.+.+++ ..++.||=+.+|.-..|
T Consensus 129 GtG~~fdW~~l~~~~-~~~~p~~LAGGL~-peNV~~ai-~~~p~gVDvsSGvE~~p 181 (203)
T 1v5x_A 129 GSGEAYPRAWAKPLL-ATGRRVILAGGIA-PENLEEVL-ALRPYALDLASGVEEAP 181 (203)
T ss_dssp TSCCCCCGGGGHHHH-HTTSCEEECSSCC-STTHHHHH-HHCCSEEEESGGGEEET
T ss_pred CCCCccCHHHHHhhh-ccCCcEEEECCCC-HHHHHHHH-hcCCCEEEeCCceecCC
Confidence 222 57999887632 2468999999995 67887777 56999999998875444
No 342
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.30 E-value=0.046 Score=55.81 Aligned_cols=67 Identities=25% Similarity=0.442 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 242 IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 242 ~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.+.++.+.++|+|.|.+..-.. .+ ...++.++.+++..++||++ |+|.|.++++.+.+. |||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G-----~~-~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~~a-GAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG-----HS-LNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELIEN-GADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC-----SB-HHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHHHT-TCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCC-----Cc-ccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHHHc-CCCEEEEe
Confidence 5678889999999998732111 10 12257788998888899886 789999999998886 99999996
No 343
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=95.26 E-value=0.2 Score=49.25 Aligned_cols=130 Identities=12% Similarity=0.066 Sum_probs=85.4
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++ +++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaG--vg~~~t~~ai~ 93 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAG----------TTAESPTLTHDEELELFAAVQKVVNGRVPLIAG--VGTNDTRDSIE 93 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESS----------TTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--CCCcCHHHHHH
Confidence 4455666665 4567999999883 234444445666677777776665 5899998 44 36788999
Q ss_pred HHHHHHHcCc-cEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCcce
Q 013813 244 YAKMLEDAGC-SLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 244 ~ak~le~aG~-d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDg 312 (436)
+++.++++|+ |++.+..-.... .. ...-+++.+.|.+.+++||+ +| |---+++.+.++.+..++-|
T Consensus 94 la~~A~~~Ga~davlv~~P~y~~-~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 166 (311)
T 3h5d_A 94 FVKEVAEFGGFAAGLAIVPYYNK-PS--QEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNIIG 166 (311)
T ss_dssp HHHHHHHSCCCSEEEEECCCSSC-CC--HHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEE
T ss_pred HHHHHHhcCCCcEEEEcCCCCCC-CC--HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEE
Confidence 9999999996 999775432110 00 01124667888888899986 44 55567788777665433333
No 344
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=95.22 E-value=0.11 Score=51.11 Aligned_cols=95 Identities=12% Similarity=0.176 Sum_probs=70.4
Q ss_pred CChHHHHHHHHHHhcccCccEEEEeccCCC--hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC
Q 013813 208 DNLPLVKSLVEKLALNLNVPVSCKIRVFPN--LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL 285 (436)
Q Consensus 208 ~~p~~v~eIv~av~~~~~iPVsVKiRlg~~--~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~ 285 (436)
..++.+.+.++.+++.++.|+.|-+-.... ..+..+.++.+.++|++.|++|+.. + ++.++.+++.
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~---------p--~~~~~~l~~~- 117 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND---------P--GEHIAEFRRH- 117 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC---------C--HHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC---------c--HHHHHHHHHc-
Confidence 357888888998887777787776544310 2334567788889999999998531 1 5677888775
Q ss_pred CCcEEEccCCCCHHHHHHHHHhcCcceeee-eh
Q 013813 286 RIPVLANGNVRHMEDVQKCLEETGCEGVLS-AE 317 (436)
Q Consensus 286 ~iPVianGGI~s~eda~~~l~~tGaDgVmI-GR 317 (436)
++||+. .+.+.+++..+.+. |+|+|.+ |.
T Consensus 118 gi~vi~--~v~t~~~a~~~~~~-GaD~i~v~g~ 147 (328)
T 2gjl_A 118 GVKVIH--KCTAVRHALKAERL-GVDAVSIDGF 147 (328)
T ss_dssp TCEEEE--EESSHHHHHHHHHT-TCSEEEEECT
T ss_pred CCCEEe--eCCCHHHHHHHHHc-CCCEEEEECC
Confidence 888884 48999999988875 9999998 53
No 345
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=95.22 E-value=0.023 Score=55.73 Aligned_cols=90 Identities=17% Similarity=0.233 Sum_probs=58.5
Q ss_pred HHHHHHhcccC--ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-----CC
Q 013813 215 SLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----RI 287 (436)
Q Consensus 215 eIv~av~~~~~--iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-----~i 287 (436)
+-++++++..+ +++.+=+. +.++ ++.+.++|+|+|-++.- +.+.++++++.+ ++
T Consensus 185 ~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~~ 245 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEVECS---SLQE----AVQAAEAGADLVLLDNF------------KPEELHPTATVLKAQFPSV 245 (299)
T ss_dssp HHHHHHHHHHTTTSCEEEEES---SHHH----HHHHHHTTCSEEEEESC------------CHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHhCCcCCeEEEecC---CHHH----HHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCCe
Confidence 44555555443 34555322 2233 33445689999988641 134455444333 49
Q ss_pred cEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 288 PVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 288 PVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
||.++||| +.+.+.++++ +|+|++.+|......|++
T Consensus 246 ~I~ASGGI-t~~ni~~~~~-aGaD~i~vGs~i~~a~~~ 281 (299)
T 2jbm_A 246 AVEASGGI-TLDNLPQFCG-PHIDVISMGMLTQAAPAL 281 (299)
T ss_dssp EEEEESSC-CTTTHHHHCC-TTCCEEECTHHHHSCCCC
T ss_pred eEEEECCC-CHHHHHHHHH-CCCCEEEEChhhcCCCCc
Confidence 99999999 8899999887 599999999977665665
No 346
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=95.22 E-value=0.039 Score=55.37 Aligned_cols=43 Identities=19% Similarity=0.534 Sum_probs=37.4
Q ss_pred ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 272 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 272 ~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
...|+.++.+++.+++||+.-| |.+.++++.+.+. |+|+|.+.
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~-v~~~e~A~~a~~~-GaD~I~vs 245 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKG-ILTKEDAELAMKH-NVQGIVVS 245 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEE-ECSHHHHHHHHHT-TCSEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHHHc-CCCEEEEe
Confidence 4689999999999999998765 6889999998886 99999874
No 347
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.20 E-value=0.34 Score=47.55 Aligned_cols=131 Identities=12% Similarity=0.098 Sum_probs=86.7
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC-CChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF-PNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg-~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..+++++
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Lt~~Er~~v~~~~v~~~grvpViaG--vg~~~t~~ai~l 94 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLG----------ILGEAPKLDAAEAEAVATRFIKRAKSMQVIVG--VSAPGFAAMRRL 94 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEST----------GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEE--CCCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCc----------cCcChhhCCHHHHHHHHHHHHHHcCCCcEEEe--cCCCCHHHHHHH
Confidence 56777777754 577999998873 234444445555566666665554 5899988 44 467899999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--CcEEE------ccCCCCHHHHHHHHHh-cCcceee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLA------NGNVRHMEDVQKCLEE-TGCEGVL 314 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~--iPVia------nGGI~s~eda~~~l~~-tGaDgVm 314 (436)
++.++++|+|++.+..-... .+...-+++.+.|.+.++ +||+. .|---+++.+.++.+. .++-||=
T Consensus 95 a~~A~~~Gadavlv~~P~~~----~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK 169 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPPSL----RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLK 169 (313)
T ss_dssp HHHHHHHTCSEEEECCCTTC----CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHcCCCEEEECCCCCC----CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEE
Confidence 99999999999987532211 111122566788888887 99875 3555678888887743 3444443
No 348
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.18 E-value=0.21 Score=46.07 Aligned_cols=130 Identities=14% Similarity=0.091 Sum_probs=81.6
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccE--EEEecc
Q 013813 158 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPV--SCKIRV 234 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPV--sVKiRl 234 (436)
.++++.+=-.+.++..+.++.+..|+|.+|+.+ |.. .. +| .++++++++.. +.|+ .+|+
T Consensus 7 ~~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~--~~~--~~--~G----------~~~i~~lr~~~~~~~i~ld~~l-- 68 (218)
T 3jr2_A 7 PMIQIALDQTNLTDAVAVASNVASYVDVIEVGT--ILA--FA--EG----------MKAVSTLRHNHPNHILVCDMKT-- 68 (218)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHGGGCSEEEECH--HHH--HH--HT----------THHHHHHHHHCTTSEEEEEEEE--
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcCCceEEEeCc--HHH--Hh--cC----------HHHHHHHHHhCCCCcEEEEEee--
Confidence 346777766778888888877767899999885 211 01 12 24667776653 4444 5664
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-ccCCCCHHHHHHHHHhcCccee
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-NGNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-nGGI~s~eda~~~l~~tGaDgV 313 (436)
... ...+++.+.++|+|+|++|+-.... .--+.++.+++. ++.+.. .=|+.|.+++.++.+. |+|.+
T Consensus 69 ~d~---p~~~~~~~~~aGad~i~vh~~~~~~-------~~~~~~~~~~~~-g~~~~~d~l~~~T~~~~~~~~~~-g~d~v 136 (218)
T 3jr2_A 69 TDG---GAILSRMAFEAGADWITVSAAAHIA-------TIAACKKVADEL-NGEIQIEIYGNWTMQDAKAWVDL-GITQA 136 (218)
T ss_dssp CSC---HHHHHHHHHHHTCSEEEEETTSCHH-------HHHHHHHHHHHH-TCEEEEECCSSCCHHHHHHHHHT-TCCEE
T ss_pred ccc---HHHHHHHHHhcCCCEEEEecCCCHH-------HHHHHHHHHHHh-CCccceeeeecCCHHHHHHHHHc-Cccce
Confidence 222 2346788999999999999754211 001334445443 665553 4445688888888776 99987
Q ss_pred eeeh
Q 013813 314 LSAE 317 (436)
Q Consensus 314 mIGR 317 (436)
.+..
T Consensus 137 ~~~~ 140 (218)
T 3jr2_A 137 IYHR 140 (218)
T ss_dssp EEEC
T ss_pred eeee
Confidence 6643
No 349
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.16 E-value=1.2 Score=43.08 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=93.6
Q ss_pred CCC-EEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEec
Q 013813 157 DRP-LFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIR 233 (436)
Q Consensus 157 e~p-livQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiR 233 (436)
++| ++|.|.+.+.+++...++.+. .|+|.||+=+.+= .. ..+.+.+.+.+..+++.+ ++|+.+=+|
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l---------~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHF---------AN--VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGC---------TT--TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccc---------cc--cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 445 669999999999998888776 6999999976421 10 123477888999998887 799999888
Q ss_pred c----CC---ChhhHHHHHHHHHHcC-ccEEEeccCcccccCCCCCccCHHHHHHHH---hhCCCcEEEc----cCCCCH
Q 013813 234 V----FP---NLQDTIKYAKMLEDAG-CSLLAVHGRTRDEKDGKKFRADWNAIKAVK---NALRIPVLAN----GNVRHM 298 (436)
Q Consensus 234 l----g~---~~~d~~~~ak~le~aG-~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik---~~~~iPVian----GGI~s~ 298 (436)
. |. +.++-.++.+.+.+.| +++|.|--... -+.++++. +..++.||++ .+--+.
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~-----------~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~ 175 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTG-----------DDEVKATVGYAHQHNVAVIMSNHDFHKTPAA 175 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGC-----------HHHHHHHHHHHHHTTCEEEEEEEESSCCCCH
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCC-----------HHHHHHHHHHHHhCCCEEEEEeecCCCCcCH
Confidence 7 21 3345567778788889 99998853221 13344443 2347788875 334445
Q ss_pred HHHHHHHH---hcCcceeeee
Q 013813 299 EDVQKCLE---ETGCEGVLSA 316 (436)
Q Consensus 299 eda~~~l~---~tGaDgVmIG 316 (436)
+++.+.++ ..|||.|=|+
T Consensus 176 ~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 176 EEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEE
Confidence 55555443 3588877555
No 350
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=95.15 E-value=0.26 Score=44.63 Aligned_cols=128 Identities=20% Similarity=0.199 Sum_probs=75.5
Q ss_pred EEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCCh
Q 013813 160 LFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNL 238 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~ 238 (436)
+++-+-..+.++..+.++.+..|+|.|+++++. . .. +| + ++++.+++.. +.|+.+-+-.. +.
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~--~--~~--~g------~----~~i~~l~~~~~~~~i~~~l~~~-di 65 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAEYVDIIELGTPL--I--KA--EG------L----SVITAVKKAHPDKIVFADMKTM-DA 65 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGGGCSEEEECHHH--H--HH--HC------T----HHHHHHHHHSTTSEEEEEEEEC-SC
T ss_pred EEEEeCCCCHHHHHHHHHHhhccCCEEEECcHH--H--Hh--hC------H----HHHHHHHHhCCCCeEEEEEEec-Cc
Confidence 566666678888888887776688999996532 1 11 12 2 3566666665 77887632232 21
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCH-HHHHHHHhhCCCcE-EEccCCCCHHH-HHHHHHhcCcceeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPV-LANGNVRHMED-VQKCLEETGCEGVLS 315 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~-~~i~~ik~~~~iPV-ianGGI~s~ed-a~~~l~~tGaDgVmI 315 (436)
...+++.+.++|+|+|++|.-.... .. +.++.+++ .++++ +..-...++++ ++.+.+ .|+|.|-+
T Consensus 66 --~~~~~~~a~~~Gad~v~vh~~~~~~--------~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~~-~g~d~v~~ 133 (207)
T 3ajx_A 66 --GELEADIAFKAGADLVTVLGSADDS--------TIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQEVRA-LGAKFVEM 133 (207)
T ss_dssp --HHHHHHHHHHTTCSEEEEETTSCHH--------HHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHH-TTCSEEEE
T ss_pred --cHHHHHHHHhCCCCEEEEeccCChH--------HHHHHHHHHHH-cCCceEEEEecCCChHHHHHHHHH-hCCCEEEE
Confidence 2336788889999999999754311 11 22233333 25555 21224446666 444444 48999844
Q ss_pred e
Q 013813 316 A 316 (436)
Q Consensus 316 G 316 (436)
.
T Consensus 134 ~ 134 (207)
T 3ajx_A 134 H 134 (207)
T ss_dssp E
T ss_pred E
Confidence 4
No 351
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.10 E-value=0.12 Score=50.67 Aligned_cols=116 Identities=17% Similarity=0.237 Sum_probs=74.9
Q ss_pred cCCCcEEE----EecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEE--e--ccC------CChhhHHHHH
Q 013813 180 EPYCDYVD----INLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCK--I--RVF------PNLQDTIKYA 245 (436)
Q Consensus 180 ~~g~D~Id----LN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVK--i--Rlg------~~~~d~~~~a 245 (436)
+-|+|+|- +|.|.|.. ....+.+.++++++. ..++|+.+= + |.| .+.+.....+
T Consensus 139 rlGADaV~~l~~i~~Gs~~e-----------~~~l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 139 DRGVDFAKTLVRINLSDAGT-----------APTLEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp HHTCCEEEEEEEECTTCTTH-----------HHHHHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred HCCCCEEEEEEEECCCChhH-----------HHHHHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 34888866 67777653 112355666666654 448887764 1 322 2334455667
Q ss_pred HHHHHcCcc----EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCC--CHHHHHHHHHh----cCcceeee
Q 013813 246 KMLEDAGCS----LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVR--HMEDVQKCLEE----TGCEGVLS 315 (436)
Q Consensus 246 k~le~aG~d----~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~--s~eda~~~l~~----tGaDgVmI 315 (436)
+...+.|+| .|-+- ++ +.++++.+...+||+..||=. +.+++.+..+. .|+.||.+
T Consensus 207 RiAaELGADs~~tivK~~---------y~-----e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~v 272 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLP---------VV-----EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTV 272 (307)
T ss_dssp HHHHTCSSCCSSEEEEEE---------CC-----TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEE
T ss_pred HHHHHhCCCcCCCEEEeC---------Cc-----HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEee
Confidence 788999999 77551 11 235788888899998888766 45666554432 49999999
Q ss_pred ehHHhh
Q 013813 316 AESLLE 321 (436)
Q Consensus 316 GRgal~ 321 (436)
||-++.
T Consensus 273 GRNIfQ 278 (307)
T 3fok_A 273 GRTLLY 278 (307)
T ss_dssp CTTTSS
T ss_pred chhhcc
Confidence 998776
No 352
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=95.09 E-value=0.083 Score=53.55 Aligned_cols=128 Identities=11% Similarity=0.009 Sum_probs=90.3
Q ss_pred HHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHH
Q 013813 169 PEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYA 245 (436)
Q Consensus 169 ~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~a 245 (436)
++++++.| +.++.||..|-+..|.+.. +-. -..+++.-.+.++++++.+ ++.+.|...-+|+.++++.++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~------~~~-~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~~~A~~~~ 221 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGR------HMP-LWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVL 221 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTT------TSC-HHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCc------ccc-ccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCHHHHHHHH
Confidence 45656555 4567899999999875321 000 0012455566778888865 578888888889999999999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh-----CCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~-----~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+.+++.++.+| ++. . +.|++..+++++. ..+||...=.+. ..++.++++...+|.|++
T Consensus 222 ~~L~~~~l~~i-------EeP--~--~~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~ 284 (392)
T 3v5c_A 222 AALSDVNLYWL-------EAA--F--HEDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHTTTSCCCEE-------ECS--S--SCCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECC
T ss_pred HhcccCCCeEE-------eCC--C--CcCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEe
Confidence 99999988776 221 1 2367777888775 578877766777 788999998867888765
No 353
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.02 E-value=0.11 Score=50.68 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=80.4
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+.+-. .+..+++++
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~l 91 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLG----------STGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVADAVAQ 91 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHH
Confidence 56667777754 567999986652 234444445555566777666554 5799888432 466899999
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHH
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLE 306 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~ 306 (436)
++.++++|+|++.+..-.... .+...-+++.+.|.+.+++||+ +| |---+++.+.++.+
T Consensus 92 a~~a~~~Gadavlv~~P~y~~---~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 92 AKLYEKLGADGILAILEAYFP---LKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp HHHHHHHTCSEEEEEECCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHc
Confidence 999999999999775332110 0001124667788888889975 44 33356777776643
No 354
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.02 E-value=0.076 Score=48.84 Aligned_cols=84 Identities=21% Similarity=0.305 Sum_probs=63.8
Q ss_pred CccEEEEeccCC---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-------ccC
Q 013813 225 NVPVSCKIRVFP---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-------NGN 294 (436)
Q Consensus 225 ~iPVsVKiRlg~---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-------nGG 294 (436)
++-|+|-...+. +.+.+.++++.++++|+++|.+. ..+.++.+++.+++|+++ .++
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~--------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 71 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN--------------TKEDILAIKETVDLPVIGIVKRDYDHSD 71 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE--------------SHHHHHHHHHHCCSCEEEECBCCCTTCC
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC--------------CHHHHHHHHHhcCCCEEeeeccCCCccc
Confidence 345666654443 34577889999999999998652 136789999999999974 445
Q ss_pred C---CCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 295 V---RHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 295 I---~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
+ .+.+++..+++. |+|.|.++..+..+|
T Consensus 72 ~~i~~~~~~i~~~~~~-Gad~v~l~~~~~~~p 102 (223)
T 1y0e_A 72 VFITATSKEVDELIES-QCEVIALDATLQQRP 102 (223)
T ss_dssp CCBSCSHHHHHHHHHH-TCSEEEEECSCSCCS
T ss_pred cccCCcHHHHHHHHhC-CCCEEEEeeecccCc
Confidence 5 567888888875 999999998887777
No 355
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.01 E-value=0.21 Score=48.20 Aligned_cols=108 Identities=14% Similarity=0.219 Sum_probs=67.1
Q ss_pred HHHHHH-HHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHH
Q 013813 169 PEILLN-AARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKM 247 (436)
Q Consensus 169 ~e~~~~-AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~ 247 (436)
.+...+ |.+.+++|+|.||||++.+ ....++.+..+|+++++.+++|++|-.. + .+.++.
T Consensus 33 ~~~a~~~a~~~v~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisIDT~------~-~~v~~a 93 (271)
T 2yci_X 33 PRPIQEWARRQAEKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLDST------N-PDAIEA 93 (271)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEECS------C-HHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEeCC------C-HHHHHH
Confidence 344444 4456788999999997663 2346788999999999888999999832 1 234455
Q ss_pred HHHc--CccEEE-eccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-----ccCCCCHHHHHHHH
Q 013813 248 LEDA--GCSLLA-VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-----NGNVRHMEDVQKCL 305 (436)
Q Consensus 248 le~a--G~d~I~-VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-----nGGI~s~eda~~~l 305 (436)
+.++ |++.|. |.+-. + +|+.+..+....+.||++ .|--.|.++..+.+
T Consensus 94 al~a~~Ga~iINdvs~~~-d---------~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l 149 (271)
T 2yci_X 94 GLKVHRGHAMINSTSADQ-W---------KMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLA 149 (271)
T ss_dssp HHHHCCSCCEEEEECSCH-H---------HHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHH
T ss_pred HHHhCCCCCEEEECCCCc-c---------ccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHH
Confidence 5555 888874 55431 1 123344444455778876 23334544444433
No 356
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=94.98 E-value=0.12 Score=50.99 Aligned_cols=90 Identities=11% Similarity=0.107 Sum_probs=68.9
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
+++.+.+.++.+++.++.|+.|.+-.. ..+..+.++.+.+.|++.|.+|+.. + .+.++.+++ .+++
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~--~~~~~~~~~~~~~~g~d~V~l~~g~---------p--~~~~~~l~~-~g~~ 126 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV--SPWADDLVKVCIEEKVPVVTFGAGN---------P--TKYIRELKE-NGTK 126 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT--STTHHHHHHHHHHTTCSEEEEESSC---------C--HHHHHHHHH-TTCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc--CCCHHHHHHHHHHCCCCEEEECCCC---------c--HHHHHHHHH-cCCc
Confidence 688899999999988888998885441 1234566777889999999998652 1 255677765 4788
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
|+. +|.+.+++..+.+. |+|+|.+
T Consensus 127 v~~--~v~s~~~a~~a~~~-GaD~i~v 150 (326)
T 3bo9_A 127 VIP--VVASDSLARMVERA-GADAVIA 150 (326)
T ss_dssp EEE--EESSHHHHHHHHHT-TCSCEEE
T ss_pred EEE--EcCCHHHHHHHHHc-CCCEEEE
Confidence 875 68999999988875 9999988
No 357
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.97 E-value=0.034 Score=57.77 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehH
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRg 318 (436)
...+.++.+.++|+|.|.+++-. +. ....|+.++.+++.. ++||+ .|+|.+.+++..+++. |+|+|.+|.|
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~-----g~-~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~-Gad~I~vg~g 304 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAH-----GH-SAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDA-GVDVVKVGIG 304 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSC-----TT-CHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHT-TCSEEEECSS
T ss_pred hHHHHHHHHHHcCCCeEEEeeec-----Cc-chhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHc-CCCEEEECcc
Confidence 34567888899999999998721 11 123478899999987 89999 8999999999999886 9999998853
No 358
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.95 E-value=0.25 Score=49.11 Aligned_cols=134 Identities=18% Similarity=0.147 Sum_probs=76.5
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCccccccc-----CChHHHHHHHHHHhcccCccEEEEe--cc---CCC--hh-----
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFLM-----DNLPLVKSLVEKLALNLNVPVSCKI--RV---FPN--LQ----- 239 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll-----~~p~~v~eIv~av~~~~~iPVsVKi--Rl---g~~--~~----- 239 (436)
++++.|+|+|-+.+- ||+.-- .....+.++.++++ ..++|+.+=+ +. +.. .+
T Consensus 118 ~a~~~GADAVk~lv~----------~g~d~~~e~~~~q~~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~ 186 (332)
T 3iv3_A 118 RLKEAGADAVKFLLY----------YDVDGDPQVNVQKQAYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVK 186 (332)
T ss_dssp HHHHTTCSEEEEEEE----------ECTTSCHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTH
T ss_pred HHHHcCCCEEEEEEE----------cCCCchHHHHHHHHHHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccC
Confidence 345679999887641 332100 11234555555543 4489988744 22 111 11
Q ss_pred --hHHHHHHHH--HHcCccEEEecc-Ccc---cccC----CCCCccCHHHHHHHHhhCCCcEE-EccCCCCHHHHHHHHH
Q 013813 240 --DTIKYAKML--EDAGCSLLAVHG-RTR---DEKD----GKKFRADWNAIKAVKNALRIPVL-ANGNVRHMEDVQKCLE 306 (436)
Q Consensus 240 --d~~~~ak~l--e~aG~d~I~VHg-Rt~---~~~~----~~~g~ad~~~i~~ik~~~~iPVi-anGGI~s~eda~~~l~ 306 (436)
.....++.+ .+.|+|.+-+-- ... ++.. -|+..-..+.++++.+...+|+| .+||+ +.++..++++
T Consensus 187 p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~ 265 (332)
T 3iv3_A 187 VHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLV 265 (332)
T ss_dssp HHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHH
Confidence 145567777 577999997741 111 0000 01101112346677777899965 79998 5666666553
Q ss_pred h---cCc--ceeeeehHHhhC
Q 013813 307 E---TGC--EGVLSAESLLEN 322 (436)
Q Consensus 307 ~---tGa--DgVmIGRgal~n 322 (436)
. .|+ .||.+||....+
T Consensus 266 ~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 266 FAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHHHHTCCCCEEEECHHHHTT
T ss_pred HHHHcCCCcceEEeeHHHHHh
Confidence 2 488 999999998776
No 359
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.91 E-value=0.6 Score=45.15 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRl 234 (436)
+.|+ +-+...|.-. |+++ +.|+|.| + .|....++.-| |-.-+.-..+.+...+++|++.+ ..||++-+-.
T Consensus 28 g~~i-~m~tayDa~s----A~l~e~aG~d~i-l-vGdSl~~~~lG-~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pf 99 (275)
T 3vav_A 28 GEKI-AMLTCYDASF----AALLDRANVDVQ-L-IGDSLGNVLQG-QTTTLPVTLDDIAYHTACVARAQPRALIVADLPF 99 (275)
T ss_dssp TCCE-EEEECCSHHH----HHHHHHTTCSEE-E-ECTTHHHHTTC-CSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCT
T ss_pred CCcE-EEEeCcCHHH----HHHHHHcCCCEE-E-ECcHHHHHHcC-CCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCC
Confidence 3444 4566666543 4445 4599999 4 33333333333 44444445677777788888887 4899999887
Q ss_pred C--CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc
Q 013813 235 F--PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 292 (436)
Q Consensus 235 g--~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian 292 (436)
| .+.+++.+-+..+.++|+++|.+-+... -.+.|+.+.+ .+|||++.
T Consensus 100 gsY~s~~~a~~~a~rl~kaGa~aVklEdg~~----------~~~~i~~l~~-~GIpv~gH 148 (275)
T 3vav_A 100 GTYGTPADAFASAVKLMRAGAQMVKFEGGEW----------LAETVRFLVE-RAVPVCAH 148 (275)
T ss_dssp TSCSSHHHHHHHHHHHHHTTCSEEEEECCGG----------GHHHHHHHHH-TTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCchh----------HHHHHHHHHH-CCCCEEEe
Confidence 5 3566777778888888999999876521 1356777765 48999864
No 360
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=94.90 E-value=0.15 Score=49.64 Aligned_cols=106 Identities=18% Similarity=0.230 Sum_probs=71.4
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc------cEEEe-ccCcccccCCCCC-cc
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC------SLLAV-HGRTRDEKDGKKF-RA 273 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~------d~I~V-HgRt~~~~~~~~g-~a 273 (436)
.||..+++.+++++ +. .+++||.+|--...+.++....++.+.+.|. +.|++ |..+ . +++.. ..
T Consensus 113 IgA~~~~n~~LLr~----~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~-~--y~~~~~~v 184 (288)
T 3tml_A 113 TPAFLCRQTDFIHA----CA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGV-S--FGYNNLVS 184 (288)
T ss_dssp ECGGGTTCHHHHHH----HH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE-E--CSSSCEEC
T ss_pred ECcccccCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC-C--CCCCcCcC
Confidence 47888899886554 33 5689999995554567788888888888887 55654 5443 2 22321 25
Q ss_pred CHHHHHHHHhhCCCcEEEc---------------cCCCCH--HHHHHHHHhcCcceeeeeh
Q 013813 274 DWNAIKAVKNALRIPVLAN---------------GNVRHM--EDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 274 d~~~i~~ik~~~~iPVian---------------GGI~s~--eda~~~l~~tGaDgVmIGR 317 (436)
|+..+..+++ .++||++. ||-+.. .-+...+.. ||||++|=.
T Consensus 185 dl~~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~-GadGl~iE~ 243 (288)
T 3tml_A 185 DMRSLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVAT-GVAGLFMET 243 (288)
T ss_dssp CHHHHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHH-CCSEEEEEE
T ss_pred CHHHHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHc-CCCEEEEee
Confidence 8999999988 89999883 443332 234455554 999999863
No 361
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.86 E-value=0.51 Score=46.41 Aligned_cols=134 Identities=11% Similarity=-0.006 Sum_probs=86.3
Q ss_pred CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccC-CChhhHHH
Q 013813 168 DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVF-PNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg-~~~~d~~~ 243 (436)
|.+.+.+-++. ++.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+. .| .+..++++
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG--vg~~~t~~ai~ 97 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILG----------TNAEAFLLTREERAQLIATARKAVGPDFPIMAG--VGAHSTRQVLE 97 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEE--CCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe--CCCCCHHHHHH
Confidence 56667777754 467999998883 234444445566667777666655 5899998 44 46789999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCC-CCHHHHHHHHH-hcCcceee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNV-RHMEDVQKCLE-ETGCEGVL 314 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI-~s~eda~~~l~-~tGaDgVm 314 (436)
+++.++++|+|++.+..-..-.+. .+...-+++.+.|.+.+++||+ +| .|+ -+++.+.++.+ ..++-||=
T Consensus 98 la~~a~~~Gadavlv~~P~y~~kp-~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiK 175 (318)
T 3qfe_A 98 HINDASVAGANYVLVLPPAYFGKA-TTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVK 175 (318)
T ss_dssp HHHHHHHHTCSEEEECCCCC---C-CCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCcccCCC-CCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEE
Confidence 999999999999977533111000 0001125677888888899986 43 244 57888888776 33444443
No 362
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.86 E-value=0.045 Score=57.32 Aligned_cols=70 Identities=16% Similarity=0.318 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
+..+.++.+.++|+|.|.+|..... . ...++.++.+++.+ ++||++ |+|.+.++++.+.+. |+|+|.+|.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~-----~-~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~a-Gad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGN-----S-VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDA-GVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCC-----S-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHH-TCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCc-----c-hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHc-CCCEEEECC
Confidence 4567788888999999999864311 0 23468899999988 899986 789999999998886 999998854
No 363
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=94.83 E-value=0.078 Score=49.41 Aligned_cols=136 Identities=19% Similarity=0.208 Sum_probs=80.1
Q ss_pred CCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 158 RPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
..++..|...|...+.+.++.+. .|+|.|.+-. . + |... .+...-.++++.+++.++.|+.|-+=. .
T Consensus 7 ~~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i-------~-D--g~fv-~~~~~~~~~~~~lr~~~~~~~~v~lmv-~ 74 (228)
T 1h1y_A 7 AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDI-------M-D--GHFV-PNLTIGAPVIQSLRKHTKAYLDCHLMV-T 74 (228)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEE-------E-B--SSSS-SCBCBCHHHHHHHHTTCCSEEEEEEES-S
T ss_pred CeEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEE-------e-c--CCcC-cchhhCHHHHHHHHhhcCCcEEEEEEe-c
Confidence 34778999999999998887764 5899877663 0 0 1110 010111256666777666666644333 2
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccC-HHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhc--Cccee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD-WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEET--GCEGV 313 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad-~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~t--GaDgV 313 (436)
+. .++++.+.++|+|+|++|+-... .. .+.++.+++. ++.++..=.-.|..+..+.+... ++|.|
T Consensus 75 d~---~~~i~~~~~agad~v~vH~~~~~--------~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~v 142 (228)
T 1h1y_A 75 NP---SDYVEPLAKAGASGFTFHIEVSR--------DNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELV 142 (228)
T ss_dssp CG---GGGHHHHHHHTCSEEEEEGGGCT--------TTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEE
T ss_pred CH---HHHHHHHHHcCCCEEEECCCCcc--------cHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEE
Confidence 22 33566677799999999976432 12 3556666654 55554433444443333333333 79999
Q ss_pred eeeh
Q 013813 314 LSAE 317 (436)
Q Consensus 314 mIGR 317 (436)
.++.
T Consensus 143 l~~s 146 (228)
T 1h1y_A 143 LVMT 146 (228)
T ss_dssp EEES
T ss_pred EEEe
Confidence 8863
No 364
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.77 E-value=0.23 Score=48.14 Aligned_cols=115 Identities=16% Similarity=0.129 Sum_probs=74.4
Q ss_pred CCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg 235 (436)
.|+ +-+...|.-. |++++ .|+|.| + .|....++.-| |-.-+.-..+.+...+++|++.++. +|.+.+-.|
T Consensus 17 ~~i-~~~tayDa~s----A~l~e~aG~d~i-l-vGdSl~~~~lG-~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfg 88 (275)
T 1o66_A 17 EKI-AMLTAYESSF----AALMDDAGVEML-L-VGDSLGMAVQG-RKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFG 88 (275)
T ss_dssp CCE-EEEECCSHHH----HHHHHHTTCCEE-E-ECTTHHHHTTC-CSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTT
T ss_pred CcE-EEEeCcCHHH----HHHHHHcCCCEE-E-ECHHHHHHHcC-CCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 444 4466777542 44554 589998 4 46555554433 5555556678888888888888875 566665443
Q ss_pred ---CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE
Q 013813 236 ---PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 291 (436)
Q Consensus 236 ---~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia 291 (436)
.+.+++++-+..+.++|+++|.+-+.. .-.+.|+.+.+ .+|||++
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEdg~----------e~~~~I~al~~-agIpV~g 136 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEGGV----------WMAETTEFLQM-RGIPVCA 136 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEECSG----------GGHHHHHHHHH-TTCCEEE
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECCcH----------HHHHHHHHHHH-cCCCeEe
Confidence 246777777888888999999997652 11244555554 3788873
No 365
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.73 E-value=0.041 Score=57.67 Aligned_cols=70 Identities=20% Similarity=0.320 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.+..+.++.+.++|+|.|.++..... ....++.++++++.. ++||++ |+|.+.++++.+.+. |||+|.+|
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~~a-GaD~I~Vg 300 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALIEA-GVSAVKVG 300 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHHHH-TCSEEEEC
T ss_pred cchHHHHHHHHhccCceEEecccccc------chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHHHh-CCCEEEEC
Confidence 34466788888999999999755321 123468899999887 889988 889999999998886 99999986
No 366
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=94.72 E-value=0.23 Score=49.09 Aligned_cols=123 Identities=9% Similarity=-0.019 Sum_probs=85.7
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCC
Q 013813 159 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPN 237 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~ 237 (436)
|+...+.|.+++++ .+.++.|+..|-+-.| ++ -.+.++++++.+ ++.+.|-..-+++
T Consensus 121 ~~~~~~~g~~~e~~---~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~~ 178 (342)
T 2okt_A 121 AYGATASGLSNKQL---ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESLD 178 (342)
T ss_dssp ECEEEESSCCHHHH---HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCCC
T ss_pred eeeEEEecCCHHHH---HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 34444424444555 4445679999998764 23 356778888776 4567777666889
Q ss_pred hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 238 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 238 ~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.+++ ++++.+++.++.+| ++... +-|++..++ +.+++||.+.=.+.+..++.++++...+|.|++-
T Consensus 179 ~~~A-~~~~~l~~~~i~~i-------EqP~~---~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k 244 (342)
T 2okt_A 179 RQDF-TQLQLLAREQVLYI-------EEPFK---DISMLDEVA--DGTIPPIALDEKATSLLDIINLIELYNVKVVVLK 244 (342)
T ss_dssp GGGH-HHHHHHGGGCEEEE-------ECCCS---SGGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEEC
T ss_pred HHHH-HHHHHHhhCCCcEE-------ECCCC---CccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 9999 99999999888776 11110 123443444 4568999999999999999999998789988764
No 367
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.65 E-value=0.25 Score=48.38 Aligned_cols=162 Identities=13% Similarity=0.119 Sum_probs=93.2
Q ss_pred CCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEec-CCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAARRVE-PYCDYVDINL-GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~-GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
.|+ +=+...|.-. |++++ .|||.|=+-- ++- ++.- |+-....-..+.+...++.|.+.+++||++-+-.|
T Consensus 22 ~~i-~~~~a~D~~s----A~l~e~aGf~ai~vs~~s~a--~~~~-G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~G 93 (298)
T 3eoo_A 22 QPL-QVVGAITAYA----AKMAEAVGFKAVYLSGGGVA--ANSL-GIPDLGISTMDDVLVDANRITNATNLPLLVDIDTG 93 (298)
T ss_dssp SSE-EEEECSSHHH----HHHHHHHTCSCEEECHHHHH--HHTT-CCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTC
T ss_pred CcE-EEecCCCHHH----HHHHHHcCCCEEEECcHHHH--HHhc-CCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCC
Confidence 444 3456666543 23333 4888887752 211 1111 12222333567777778888888899999999887
Q ss_pred C-ChhhHHHHHHHHHHcCccEEEeccCcccccCCC---CCccCH-HHHHHHHh---hC-CCcEEEccCCCCH--H-----
Q 013813 236 P-NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGK---KFRADW-NAIKAVKN---AL-RIPVLANGNVRHM--E----- 299 (436)
Q Consensus 236 ~-~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~---~g~ad~-~~i~~ik~---~~-~iPVianGGI~s~--e----- 299 (436)
. +..++.+.++.++++|+.+|.+-+.....+.+. +.-.+. +.+.+|+. .. +.+++.++..... +
T Consensus 94 yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldea 173 (298)
T 3eoo_A 94 WGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAA 173 (298)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHH
Confidence 5 456777888999999999999977654222111 111222 34555543 22 3456666655443 2
Q ss_pred --HHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 300 --DVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 300 --da~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
.++.+.+ .|||+|++= + +.++..++++.
T Consensus 174 i~Ra~ay~~-AGAD~if~~-~-~~~~ee~~~~~ 203 (298)
T 3eoo_A 174 IERAIAYVE-AGADMIFPE-A-MKTLDDYRRFK 203 (298)
T ss_dssp HHHHHHHHH-TTCSEEEEC-C-CCSHHHHHHHH
T ss_pred HHHHHhhHh-cCCCEEEeC-C-CCCHHHHHHHH
Confidence 2223333 499999883 2 24666555554
No 368
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=94.61 E-value=0.087 Score=48.86 Aligned_cols=128 Identities=13% Similarity=0.153 Sum_probs=75.9
Q ss_pred EEEEecCCCHHHHHHHHHHHc-CCCcEEEEec--CCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 160 LFVQFCANDPEILLNAARRVE-PYCDYVDINL--GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v~-~g~D~IdLN~--GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
++..|.+.|++.+.+.++.+. .|+|.|++.. |.=..+ .....++++++++.++.|+.+-+=+.
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~-------------~~~~~~~i~~l~~~~~~~~~v~l~vn- 78 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN-------------ITIGPLVVDSLRPITDLPLDVHLMIV- 78 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC-------------BCCCHHHHHHHGGGCCSCEEEEEESS-
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc-------------cccCHHHHHHHHhccCCcEEEEEEec-
Confidence 677888999999998887664 5899888864 110011 11113566677776666766654232
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccC--cccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGR--TRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgR--t~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVm 314 (436)
+..++++.+.++|+|+|++|+- ... ...+.++.+++. ++.++..-.-.+..+..+.+. .++|.|.
T Consensus 79 ---d~~~~v~~~~~~Gad~v~vh~~~~~~~--------~~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~-~~~d~vl 145 (230)
T 1rpx_A 79 ---EPDQRVPDFIKAGADIVSVHCEQSSTI--------HLHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVL-DAVDLVL 145 (230)
T ss_dssp ---SHHHHHHHHHHTTCSEEEEECSTTTCS--------CHHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTT-TTCSEEE
T ss_pred ---CHHHHHHHHHHcCCCEEEEEecCccch--------hHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHH-hhCCEEE
Confidence 2446778888999999999976 321 113556666653 444443322223333333333 3789884
No 369
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=94.59 E-value=0.21 Score=50.27 Aligned_cols=90 Identities=17% Similarity=0.295 Sum_probs=63.5
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCccc--------------c-------------cCC---------
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD--------------E-------------KDG--------- 268 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~--------------~-------------~~~--------- 268 (436)
+.|+++-+=...+.+...+.++.++++|++.|.||.-+.. + ..+
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 4577776533345566677888888888888877532110 0 000
Q ss_pred CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 269 KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 269 ~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
......|+.|+.+++.+++||+.-| |.+.++++.+.+. |+|+|.+.
T Consensus 212 ~d~~~~~~~i~~lr~~~~~PvivK~-v~~~e~a~~a~~~-Gad~I~vs 257 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHSGLPVFVKG-IQHPEDADMAIKR-GASGIWVS 257 (368)
T ss_dssp BCSBCCHHHHHHHHHHSSSCEEEEE-ECSHHHHHHHHHT-TCSEEEEC
T ss_pred cCchhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHHHc-CCCEEEEc
Confidence 0124579999999999999998874 6899999998876 99999883
No 370
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=94.59 E-value=0.29 Score=45.83 Aligned_cols=140 Identities=10% Similarity=0.049 Sum_probs=85.0
Q ss_pred CC-CEEEEecCCCH-HHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DR-PLFVQFCANDP-EILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~-plivQL~g~d~-e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+. ++++=+=-+|. +....+++.+... |.|.+|. ||+. .+.+...++...+. +.-|+|=..+
T Consensus 52 ~~~~VflDlK~~DI~nTv~~~~~~~~~~-d~vTVh~-----------~~G~----~~~~~~a~~~~~~~-~~~v~vLts~ 114 (222)
T 4dbe_A 52 DVEEIIVDFKLADIGYIMKSIVERLSFA-NSFIAHS-----------FIGV----KGSLDELKRYLDAN-SKNLYLVAVM 114 (222)
T ss_dssp CCSEEEEEEEECSCHHHHHHHHTTCTTC-SEEEEES-----------TTCT----TTTHHHHHHHHHHT-TCEEEEEEEC
T ss_pred CCCeEEEEeeecchHHHHHHHHHHHHhC-CEEEEEc-----------CcCc----HHHHHHHHHHHHhc-CCcEEEEEeC
Confidence 55 78877766664 5555566555445 9999994 2220 12233444443321 2345543334
Q ss_pred CC---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHH-HHHHHHHhcCc
Q 013813 235 FP---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHME-DVQKCLEETGC 310 (436)
Q Consensus 235 g~---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~e-da~~~l~~tGa 310 (436)
.. .......+++.++++|++++++.+.. -+.++.+++..+-.++..+||.--. +..++++. |+
T Consensus 115 s~~~~~~~~~~~~a~~a~~~g~~GvV~sat~------------p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~-Ga 181 (222)
T 4dbe_A 115 SHEGWSTLFADYIKNVIREISPKGIVVGGTK------------LDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCA-GA 181 (222)
T ss_dssp SSTTCCCTTHHHHHHHHHHHCCSEEEECTTC------------HHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHH-TC
T ss_pred CCcchHHHHHHHHHHHHHHhCCCEEEECCCC------------HHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHc-CC
Confidence 21 11233678899999999998764321 1346677776543677889887421 45566665 99
Q ss_pred ceeeeehHHhhCCccc
Q 013813 311 EGVLSAESLLENPALF 326 (436)
Q Consensus 311 DgVmIGRgal~nP~lf 326 (436)
|.++|||+++.-++-.
T Consensus 182 d~iVVGR~I~~A~dP~ 197 (222)
T 4dbe_A 182 DYEIIGRSIYNAGNPL 197 (222)
T ss_dssp SEEEECHHHHTSSSHH
T ss_pred CEEEECHHhcCCCCHH
Confidence 9999999999865543
No 371
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=94.55 E-value=0.29 Score=50.57 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHH-Hc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHH
Q 013813 167 NDPEILLNAARR-VE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 167 ~d~e~~~~AA~~-v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~ 243 (436)
.+++++++.|+. ++ .||..|-|..|.+ +++.-.+.|+++++.. ++.+.|-..-+++..+++.
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 248 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQ 248 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCCHHHHHH
Confidence 578998887764 55 5999999987642 1222345566676665 5677777777889999999
Q ss_pred HHHHHHHcCccEEEeccCcccccCCCCCccC----HHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 244 YAKMLEDAGCSLLAVHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 244 ~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad----~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+++.+++. +.+| ++... +-| ++..+++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 249 ~~~~L~~~-l~~i-------EeP~~---~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 313 (455)
T 3pfr_A 249 LCKGLNDV-LTYA-------EDPCI---GENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLA 313 (455)
T ss_dssp HHTTCTTT-CSEE-------ESCBC---CBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBC
T ss_pred HHHhhccc-ceee-------ecCCC---hhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99988876 6555 22111 123 67889999999999988767889999999999877887754
No 372
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.53 E-value=0.11 Score=47.45 Aligned_cols=82 Identities=17% Similarity=0.229 Sum_probs=61.6
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcE-EEccCCCCHHHHHH
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPV-LANGNVRHMEDVQK 303 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPV-ianGGI~s~eda~~ 303 (436)
..|+..=++ +.+.++..+.++.+.+.|++.|.+...+ +...+.++++++..++++ ++.|++.+.++++.
T Consensus 6 ~~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~---------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~ 75 (212)
T 2v82_A 6 KLPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNS---------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDA 75 (212)
T ss_dssp SSCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTS---------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHH
T ss_pred CCCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCC---------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHH
Confidence 456665554 4567888999999999999999885332 122467777877666664 56788999999999
Q ss_pred HHHhcCcceeeeeh
Q 013813 304 CLEETGCEGVLSAE 317 (436)
Q Consensus 304 ~l~~tGaDgVmIGR 317 (436)
+++. |+|+|.+|.
T Consensus 76 a~~~-Gad~V~~~~ 88 (212)
T 2v82_A 76 LARM-GCQLIVTPN 88 (212)
T ss_dssp HHHT-TCCEEECSS
T ss_pred HHHc-CCCEEEeCC
Confidence 8886 999998774
No 373
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=94.52 E-value=0.18 Score=48.60 Aligned_cols=107 Identities=21% Similarity=0.305 Sum_probs=70.1
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCC-CccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-g~ad~~~i~~ 280 (436)
.||..+++.+++++ +. .+++||.+|--...+.++....+..+...|...+++.-|... +++. ...|+..+..
T Consensus 100 IgA~~~rn~~ll~~----~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~--~~y~~~~~dl~~i~~ 172 (267)
T 2nwr_A 100 IPAFLCRQTDLLLA----AA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTT--FGYNNLVVDFRSLPI 172 (267)
T ss_dssp ECGGGTTCHHHHHH----HH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEE--CSSSCEECCTTHHHH
T ss_pred ECcccccCHHHHHH----HH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC--CCCCccccCHHHHHH
Confidence 47778888885554 43 578999999655457778888888899999866655444332 2331 1258888888
Q ss_pred HHhhCCCcEEEc---------------cCCCC--HHHHHHHHHhcCcceeeeehH
Q 013813 281 VKNALRIPVLAN---------------GNVRH--MEDVQKCLEETGCEGVLSAES 318 (436)
Q Consensus 281 ik~~~~iPVian---------------GGI~s--~eda~~~l~~tGaDgVmIGRg 318 (436)
+++. + ||+.. +|-.. ..-+...+. .|+||+||=+-
T Consensus 173 lk~~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava-~Ga~G~mIE~H 224 (267)
T 2nwr_A 173 MKQW-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVA-VGCDGVFMETH 224 (267)
T ss_dssp HTTT-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHH-HCCSEEEEEEE
T ss_pred HHHc-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHH-cCCCEEEEEec
Confidence 8876 6 99873 33211 122334444 59999999753
No 374
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.51 E-value=0.14 Score=49.48 Aligned_cols=167 Identities=14% Similarity=0.186 Sum_probs=98.3
Q ss_pred CCcEEEcc-CCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHc
Q 013813 102 RPKLIVAP-MVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVE 180 (436)
Q Consensus 102 ~~~i~lAP-M~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~ 180 (436)
++|+++|| |.+.++ .|+..+...|.+++.|+-+.......+. .|-++. ..
T Consensus 17 ~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~-------------~p~l~~---------------~~ 67 (311)
T 1ep3_A 17 KNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNP-------------TPRVAE---------------TA 67 (311)
T ss_dssp SSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCC-------------SCCEEE---------------ET
T ss_pred CCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCC-------------CCeEEE---------------CC
Confidence 78999999 988876 5666665567777777766543322111 111110 00
Q ss_pred CCCcEEEEe-cCCCchhhhcCcccccccCChHHH-HHHHHHHhc-ccCccEEEEeccCCChhhHHHHHHHHHH-cCccEE
Q 013813 181 PYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLV-KSLVEKLAL-NLNVPVSCKIRVFPNLQDTIKYAKMLED-AGCSLL 256 (436)
Q Consensus 181 ~g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v-~eIv~av~~-~~~iPVsVKiRlg~~~~d~~~~ak~le~-aG~d~I 256 (436)
... +| +|... ..++.. .++++.+++ ..+.|+.+-+.. .+.++..+.++.+++ +|+|+|
T Consensus 68 --~g~--~~~~g~~~-------------~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~i 129 (311)
T 1ep3_A 68 --SGM--LNAIGLQN-------------PGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAI 129 (311)
T ss_dssp --TEE--EECCCCCB-------------CCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEE
T ss_pred --ccc--ccccCCCC-------------cCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEE
Confidence 011 11 11110 112332 335556665 337888887643 356788888899988 999999
Q ss_pred EeccCccccc-----CCCCCccCHHHHHHHHhhCCCcEEE--ccCCCCHHHHHHHHHhcCcceeee
Q 013813 257 AVHGRTRDEK-----DGKKFRADWNAIKAVKNALRIPVLA--NGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 257 ~VHgRt~~~~-----~~~~g~ad~~~i~~ik~~~~iPVia--nGGI~s~eda~~~l~~tGaDgVmI 315 (436)
.+|--..... .+.....-++.++.+++.+++||+. ..++.+..++.+.++..|+|+|.+
T Consensus 130 ei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 130 ELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp EEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred EEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 9985322110 0000011257788888888899875 346777777555555669999988
No 375
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=94.50 E-value=0.24 Score=52.03 Aligned_cols=90 Identities=22% Similarity=0.275 Sum_probs=63.1
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCccc-------c------------------cCC-----------
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRD-------E------------------KDG----------- 268 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~-------~------------------~~~----------- 268 (436)
..|.++.+-.+.+.+...+++++++++|+++|.||--... . ...
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 4577777655556566677888888899988766532110 0 000
Q ss_pred CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 269 KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 269 ~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
......|+.|+.+++.+++||+.- |+.+.++++.+.+. |+|+|.++
T Consensus 326 ~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~a-Gad~I~vs 371 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKTKLPIVIK-GVQRTEDVIKAAEI-GVSGVVLS 371 (511)
T ss_dssp BCTTCCHHHHHHHHHHCSSCEEEE-EECSHHHHHHHHHT-TCSEEEEC
T ss_pred cChHhHHHHHHHHHHHhCCcEEEE-eCCCHHHHHHHHHc-CCCEEEEc
Confidence 011246999999999999999977 46679999988875 99999983
No 376
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=94.48 E-value=0.36 Score=49.96 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=86.5
Q ss_pred CHHHHHHHH-HHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAA-RRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA-~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ 244 (436)
++++.++.+ +..+ .||+.+-|..|.. +++.-.+.++++++.+ ++++.|-..-+|+.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt~~~Ai~~ 266 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWSLDEAVKI 266 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccCHHHHHHH
Confidence 456655555 3344 4999999886532 2333445667777766 56777777778999999999
Q ss_pred HHHHHHcCccEEEeccCcccccCC-CCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDG-KKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~-~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.++.. +.+| ++... .......+..+++++.+++||.+.-.+.+..++.++++...+|.++.
T Consensus 267 ~~~le~~-l~wi-------EeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~ 330 (464)
T 4g8t_A 267 GKQLKGV-LAYA-------EDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLA 330 (464)
T ss_dssp HHHTTTT-CSCE-------ESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBC
T ss_pred HHHhhhc-ccee-------ecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEec
Confidence 9998765 5544 21111 00012347788999999999999999999999999999877775543
No 377
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=94.48 E-value=1.6 Score=40.93 Aligned_cols=131 Identities=16% Similarity=0.157 Sum_probs=81.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC-
Q 013813 158 RPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP- 236 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~- 236 (436)
.+.++.++. ++++..+.++. .+.|.|.||- -..|+.+. .+++..++||.=-+|+..
T Consensus 71 ~~~~v~v~v-~~~ei~~~i~~--~~ld~vQLHG----------------~E~~~~~~----~l~~~~~~~viKa~~v~~~ 127 (228)
T 4aaj_A 71 PVFLVSTMV-GFSEWAMAIER--TGAQYIQVHS----------------NALPQTID----TLKKEFGVFVMKAFRVPTI 127 (228)
T ss_dssp CEEEEECCC-CHHHHHHHHHH--HTCSEEEECS----------------CCCHHHHH----HHHHHHCCEEEEEEECCSS
T ss_pred CCEEEeccC-chHHHHHHHHh--ccchheeccc----------------ccCHHHHH----HHhhccCceEEEEEEeccc
Confidence 345566655 46655444332 2679999982 12455444 445555677754455532
Q ss_pred --C-hhhHHHHHHHHHHcCccEEEeccCcccccCCCCC-ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcce
Q 013813 237 --N-LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 237 --~-~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g-~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDg 312 (436)
. .++...+...+....+|++.+-.. +++| ..||+.++.+.. +.|++..||++ ++.+.++++..+..|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~d~~LlDs~------GGtG~~fDW~~~~~~~~--~~p~iLAGGL~-peNV~~Ai~~~~P~g 198 (228)
T 4aaj_A 128 SKNPEEDANRLLSEISRYNADMVLLDTG------AGSGKLHDLRVSSLVAR--KIPVIVAGGLN-AENVEEVIKVVKPYG 198 (228)
T ss_dssp CSCHHHHHHHHHHHHHHSCCSEEEEEC-------------CCCHHHHHHHH--HSCEEEESSCC-TTTHHHHHHHHCCSE
T ss_pred ccchhhhHHHHHHHHhccCCCEEccCCC------CCCcCcCChHHHHHhhh--cCCeEEECCCC-HHHHHHHHHHhCCCE
Confidence 1 233444455566678999877532 2222 479998887765 46999999996 688888888778888
Q ss_pred eeeehHHh
Q 013813 313 VLSAESLL 320 (436)
Q Consensus 313 VmIGRgal 320 (436)
|=+..|.=
T Consensus 199 VDVsSGVE 206 (228)
T 4aaj_A 199 VDVSSGVE 206 (228)
T ss_dssp EEESGGGE
T ss_pred EEeCCCCC
Confidence 88887763
No 378
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.47 E-value=0.44 Score=45.82 Aligned_cols=139 Identities=13% Similarity=0.147 Sum_probs=86.8
Q ss_pred CCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCc-cEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV-PVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i-PVsVKiRlg 235 (436)
.|+ +-+...|.-. |++++ .|+|.|=+ |....++.-| |-.-+.-..+.+...+++|++.++. +|.+-+-.|
T Consensus 17 ~~i-~~~tayD~~s----A~l~e~aG~d~ilv--Gdsl~~~~lG-~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfg 88 (264)
T 1m3u_A 17 KRF-ATITAYDYSF----AKLFADEGLNVMLV--GDSLGMTVQG-HDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFM 88 (264)
T ss_dssp CCE-EEEECCSHHH----HHHHHHHTCCEEEE--CTTHHHHTTC-CSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTT
T ss_pred CcE-EEEeCcCHHH----HHHHHHcCCCEEEE--CHHHHHHHcC-CCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 444 4466777542 44554 49999966 6666555443 4555555667778888888888875 456664332
Q ss_pred C--ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-----------ccCC----CCH
Q 013813 236 P--NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-----------NGNV----RHM 298 (436)
Q Consensus 236 ~--~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-----------nGGI----~s~ 298 (436)
. +.+++++.+..+.++|+++|.+-+.. .-.+.|+.+.+ .+|||++ .||. ++.
T Consensus 89 sy~~~~~a~~~a~rl~kaGa~aVklEgg~----------e~~~~I~al~~-agipV~gHiGLtPq~v~~~ggf~v~grt~ 157 (264)
T 1m3u_A 89 AYATPEQAFENAATVMRAGANMVKIEGGE----------WLVETVQMLTE-RAVPVCGHLGLTPQSVNIFGGYKVQGRGD 157 (264)
T ss_dssp SSSSHHHHHHHHHHHHHTTCSEEECCCSG----------GGHHHHHHHHH-TTCCEEEEEESCGGGHHHHTSSCCCCCSH
T ss_pred CcCCHHHHHHHHHHHHHcCCCEEEECCcH----------HHHHHHHHHHH-CCCCeEeeecCCceeecccCCeEEEeCCH
Confidence 1 45677777788888999999887652 11345666654 3799983 4554 344
Q ss_pred HHHHHHH------HhcCcceeee
Q 013813 299 EDVQKCL------EETGCEGVLS 315 (436)
Q Consensus 299 eda~~~l------~~tGaDgVmI 315 (436)
+.+++++ ++.|||+|.+
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 158 EAGDQLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEE
Confidence 4333333 2348998876
No 379
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.47 E-value=0.25 Score=48.53 Aligned_cols=161 Identities=12% Similarity=0.095 Sum_probs=94.6
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEec-CCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINL-GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~-GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.|+ +=+...|.-. |+++ +.|||+|=+-- +.- .+. |+-....-..+.+...++.|.+.+++||++-+-.
T Consensus 28 ~~~i-~~~~ayD~~s----A~l~e~aG~dai~vs~~s~a--~~~--G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~ 98 (305)
T 3ih1_A 28 NEIL-QIPGAHDAMA----ALVARNTGFLALYLSGAAYT--ASK--GLPDLGIVTSTEVAERARDLVRATDLPVLVDIDT 98 (305)
T ss_dssp SSCE-EEEBCSSHHH----HHHHHHTTCSCEEECHHHHH--HHH--TCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTT
T ss_pred CCcE-EEecCcCHHH----HHHHHHcCCCEEEECcHHHH--HhC--CCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3443 4466667542 3444 35899887763 111 111 2333333456667777778877888999999888
Q ss_pred CC-ChhhHHHHHHHHHHcCccEEEeccCcccccCC---CCCccCH-HHHHHH---HhhCCCcEEEccCCCCH--------
Q 013813 235 FP-NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDG---KKFRADW-NAIKAV---KNALRIPVLANGNVRHM-------- 298 (436)
Q Consensus 235 g~-~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~---~~g~ad~-~~i~~i---k~~~~iPVianGGI~s~-------- 298 (436)
|. +..++.+.++.++++|+++|.+-+.....+.+ .+.-.+. +.+.+| ++. +.+++.+|.....
T Consensus 99 Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~a 177 (305)
T 3ih1_A 99 GFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEA 177 (305)
T ss_dssp CSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHH
Confidence 74 44567778899999999999997765322111 1111222 334444 444 6777777766553
Q ss_pred -HHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 299 -EDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 299 -eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++.+.+ .|||+|++= + +.++..++++.
T Consensus 178 i~Ra~ay~e-AGAD~i~~e-~-~~~~~~~~~i~ 207 (305)
T 3ih1_A 178 IERANAYVK-AGADAIFPE-A-LQSEEEFRLFN 207 (305)
T ss_dssp HHHHHHHHH-HTCSEEEET-T-CCSHHHHHHHH
T ss_pred HHHHHHHHH-cCCCEEEEc-C-CCCHHHHHHHH
Confidence 33333444 499999982 2 24445555544
No 380
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.46 E-value=0.29 Score=48.98 Aligned_cols=101 Identities=12% Similarity=0.145 Sum_probs=73.3
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAV 281 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~i 281 (436)
-||.-+++..+++++- ..++||.+|.-.. +.++....++.+.+.|.+.+.+|+-+.-+. .....|+..|..+
T Consensus 130 I~S~~~~n~~LL~~va-----~~gkPviLstGma-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~--~~~~~nL~ai~~l 201 (349)
T 2wqp_A 130 IGSGECNNYPLIKLVA-----SFGKPIILSTGMN-SIESIKKSVEIIREAGVPYALLHCTNIYPT--PYEDVRLGGMNDL 201 (349)
T ss_dssp ECGGGTTCHHHHHHHH-----TTCSCEEEECTTC-CHHHHHHHHHHHHHHTCCEEEEECCCCSSC--CGGGCCTHHHHHH
T ss_pred ECcccccCHHHHHHHH-----hcCCeEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEeccCCCCC--ChhhcCHHHHHHH
Confidence 3677788988877664 3589999996554 778888888888899998888886543222 1225789999999
Q ss_pred HhhC-CCcEEEccCCCCHHHHHHHHHhcCcc
Q 013813 282 KNAL-RIPVLANGNVRHMEDVQKCLEETGCE 311 (436)
Q Consensus 282 k~~~-~iPVianGGI~s~eda~~~l~~tGaD 311 (436)
++.. ++||..++==....-+...+.. ||+
T Consensus 202 k~~f~~lpVg~sdHt~G~~~~~AAvAl-GA~ 231 (349)
T 2wqp_A 202 SEAFPDAIIGLSDHTLDNYACLGAVAL-GGS 231 (349)
T ss_dssp HHHCTTSEEEEECCSSSSHHHHHHHHH-TCC
T ss_pred HHHCCCCCEEeCCCCCcHHHHHHHHHh-CCC
Confidence 9998 8999876633335555566654 888
No 381
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.35 E-value=0.44 Score=46.12 Aligned_cols=122 Identities=11% Similarity=-0.047 Sum_probs=81.8
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC-CChhhHHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYA 245 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~a 245 (436)
|.+.+.+-++ .++.|+|+|=++. ..|-+..-..+.-.++++.+.+.++- |.+. .| .+..++++++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaG--vg~~~t~~ai~la 84 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNG----------TTGLGPALSKDEKRQNLNALYDVTHK-LIFQ--VGSLNLNDVMELV 84 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHTTTCSC-EEEE--CCCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-eEEe--eCCCCHHHHHHHH
Confidence 5666777775 4567999998873 34545555677778889988877754 6666 44 3568899999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec----cCC-CCHHHHHHH
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQKC 304 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an----GGI-~s~eda~~~ 304 (436)
+.++++|+|++.+..-..... .+...-+++.+.|.+.+++||+ +| -|+ -+++.+.++
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 85 KFSNEMDILGVSSHSPYYFPR--LPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHHHTSCCSEEEECCCCSSCS--CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHHHhcCCCEEEEcCCcCCCC--CCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 999999999997753321100 0101125667888888899986 45 243 466666654
No 382
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.28 E-value=0.024 Score=55.52 Aligned_cols=91 Identities=11% Similarity=0.189 Sum_probs=47.6
Q ss_pred HHHHHHHhcccC--ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC------
Q 013813 214 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL------ 285 (436)
Q Consensus 214 ~eIv~av~~~~~--iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~------ 285 (436)
.+-++++++..+ +++.+-+. +.++ ++.+.++|+|+|-++.-. .+.++++++.+
T Consensus 186 ~~ai~~~r~~~~~~~~i~vev~---tlee----~~~A~~aGaD~I~ld~~~------------~~~l~~~v~~l~~~~~g 246 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEVECL---SEDE----ATEAIEAGADVIMLDNFK------------GDGLKMCAQSLKNKWNG 246 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEEECS---SSHH----HHHHHHHTCSEEECCC-------------------------------
T ss_pred HHHHHHHHHhcCcCCeEEEecC---CHHH----HHHHHHcCCCEEEECCCC------------HHHHHHHHHHhcccccC
Confidence 344555555543 35555432 2233 333446899999876421 12333333332
Q ss_pred --CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 286 --RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 286 --~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+++|.++||| +.+.+.++.+ +|+|++.+|+.....|++
T Consensus 247 ~~~v~I~ASGGI-t~~ni~~~~~-~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 247 KKHFLLECSGGL-NLDNLEEYLC-DDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp --CCEEEEECCC-CC------CC-CSCSEEECGGGTSSCCCC
T ss_pred CCCeEEEEECCC-CHHHHHHHHH-cCCCEEEEechhcCCCCC
Confidence 3899999999 8899999886 599999999886555554
No 383
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.27 E-value=0.44 Score=46.00 Aligned_cols=121 Identities=21% Similarity=0.142 Sum_probs=80.3
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC-CChhhHHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYA 245 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~a 245 (436)
|.+.+.+-++ .++.|+|+|=++. .-|-+..-..+.-.++++.+.+.++- |.+. .| .+..++++++
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~G--vg~~~t~~ai~la 83 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAG----------TTGLGPALSLQEKMELTDAATSAARR-VIVQ--VASLNADEAIALA 83 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHHHHCSS-EEEE--CCCSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-EEEe--eCCCCHHHHHHHH
Confidence 5667777775 4567999998873 23444444666667788877776644 7766 44 3568899999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEE-c-----cCCCCHHHHHH
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA-N-----GNVRHMEDVQK 303 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia-n-----GGI~s~eda~~ 303 (436)
+.++++|+|++.+..-..... .+...-+++.+.|.+.+++||+. | |---+++.+.+
T Consensus 84 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 84 KYAESRGAEAVASLPPYYFPR--LSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHTTCSEEEECCSCSSTT--CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCCcCCCC--CCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 999999999997753321100 01011256677888888999864 4 33356777766
No 384
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.23 E-value=0.7 Score=44.92 Aligned_cols=136 Identities=16% Similarity=0.160 Sum_probs=91.4
Q ss_pred CEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--C-
Q 013813 159 PLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F- 235 (436)
Q Consensus 159 plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--g- 235 (436)
.+.+-+|..+.++...| .+.|+|-|||+-+-.. +.+--.+. +++.+++.+++||-+=||. |
T Consensus 39 ~~~lEvc~~s~~~a~~A---~~gGAdRIELc~~l~~---------GGlTPS~g----~i~~a~~~~~ipV~vMIRPRgGd 102 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNA---ERGGADRIELCSGLSE---------GGTTPSMG----VLQVVKQSVQIPVFVMIRPRGGD 102 (287)
T ss_dssp CSEEEEEESSHHHHHHH---HHHTCSEEEECBCGGG---------TCBCCCHH----HHHHHHTTCCSCEEEECCSSSSC
T ss_pred CceEEEEeCCHHHHHHH---HHhCCCEEEECCCCCC---------CCCCCCHH----HHHHHHHhcCCCeEEEEecCCCC
Confidence 36788999998876544 3468999999832111 12222333 3455566678999988887 2
Q ss_pred --CChh---hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCC---CCHHHHHHHHH
Q 013813 236 --PNLQ---DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNV---RHMEDVQKCLE 306 (436)
Q Consensus 236 --~~~~---d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI---~s~eda~~~l~ 306 (436)
.+.. ...+-++.+.++|+|+|+++.=+.+. ..|.+.++++.+.. .++|...=-+ .++..+.+.+.
T Consensus 103 F~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg------~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li 176 (287)
T 3iwp_A 103 FLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG------HIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLL 176 (287)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS------CBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC------CcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHH
Confidence 1222 23455777889999999998766542 57888888776653 6888877653 45777777666
Q ss_pred hcCcceeeee
Q 013813 307 ETGCEGVLSA 316 (436)
Q Consensus 307 ~tGaDgVmIG 316 (436)
..|+|.|..+
T Consensus 177 ~lGvdrILTS 186 (287)
T 3iwp_A 177 TLGFERVLTS 186 (287)
T ss_dssp HHTCSEEEEC
T ss_pred HcCCCEEECC
Confidence 6699999874
No 385
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=94.23 E-value=0.14 Score=47.41 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=66.2
Q ss_pred HHHHHHHhcccCccEEEEeccCC---Chh--hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 214 KSLVEKLALNLNVPVSCKIRVFP---NLQ--DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 214 ~eIv~av~~~~~iPVsVKiRlg~---~~~--d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
.++++.+ .-+++++|..-.+. +.+ +..++++.++++|+++|.+. ..+.++.+++.+++|
T Consensus 8 ~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--------------~~~~i~~i~~~~~~p 71 (234)
T 1yxy_A 8 EKLMEQL--KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--------------SVRDIKEIQAITDLP 71 (234)
T ss_dssp HHHHHHH--TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--------------SHHHHHHHHTTCCSC
T ss_pred HHHHHHH--hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--------------CHHHHHHHHHhCCCC
Confidence 3566666 33566666643321 245 77889999999999998763 125688999999999
Q ss_pred EEEc-------cCC---CCHHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 289 VLAN-------GNV---RHMEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 289 Vian-------GGI---~s~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
+++. +++ .+.++++.+++. |+|.|.++-....+|
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~~~i~~~~~~-Gad~V~l~~~~~~~~ 115 (234)
T 1yxy_A 72 IIGIIKKDYPPQEPFITATMTEVDQLAAL-NIAVIAMDCTKRDRH 115 (234)
T ss_dssp EEEECBCCCTTSCCCBSCSHHHHHHHHTT-TCSEEEEECCSSCCT
T ss_pred EEeeEcCCCCccccccCChHHHHHHHHHc-CCCEEEEcccccCCC
Confidence 9742 222 356778887775 999999998887777
No 386
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.19 E-value=2.6 Score=40.05 Aligned_cols=94 Identities=17% Similarity=0.305 Sum_probs=67.3
Q ss_pred CCCC-EEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEe
Q 013813 156 EDRP-LFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKI 232 (436)
Q Consensus 156 ~e~p-livQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKi 232 (436)
+++| ++|-|.|.+.+++.+.++.+ ..|+|.||+=+.+=.. ..+.+.+.+.+..+++.. ++|+.+=+
T Consensus 17 ~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~-----------~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 17 EGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN-----------VENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp SSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc-----------cCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4566 77999999999988777655 4589999998642100 135678889999998876 69999999
Q ss_pred cc----C---CChhhHHHHHHHHHHcC-ccEEEecc
Q 013813 233 RV----F---PNLQDTIKYAKMLEDAG-CSLLAVHG 260 (436)
Q Consensus 233 Rl----g---~~~~d~~~~ak~le~aG-~d~I~VHg 260 (436)
|. | .+.++..++.+.+.+.| +|+|.|--
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 87 2 13344555666666666 89998753
No 387
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.18 E-value=0.7 Score=46.01 Aligned_cols=137 Identities=18% Similarity=0.124 Sum_probs=87.1
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
|.+.+.+-++ +++.|+|+|=++. ..|-+..-..+.-.++++. ...-.+||.+.+- +.+..+++++++
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg-~~st~eai~la~ 112 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYCG----------SMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTG-AVNTASAVAHAV 112 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEESS----------GGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECC-CSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCc----------cCcChhhCCHHHHHHHHHH-HhCCCCcEEEecC-CCCHHHHHHHHH
Confidence 5677777775 4567999998873 2344444455555666666 2222689998842 235688999999
Q ss_pred HHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHh-hCCCcEE-Ec----cCCCCHHHHHHH-HHhcCcceeeeehH
Q 013813 247 MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALRIPVL-AN----GNVRHMEDVQKC-LEETGCEGVLSAES 318 (436)
Q Consensus 247 ~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~-~~~iPVi-an----GGI~s~eda~~~-l~~tGaDgVmIGRg 318 (436)
.++++|+|++.+..-.... ..+...-+++++.|.+ .+++||+ +| |---+++.+.++ .+..++-||=-..+
T Consensus 113 ~A~~~Gadavlv~~P~y~~--~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~pnIvGiKdssg 189 (344)
T 2hmc_A 113 HAQKVGAKGLMVIPRVLSR--GSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEHKNLVGFKEFGG 189 (344)
T ss_dssp HHHHHTCSEEEECCCCSSS--TTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHCTTEEEEEECSC
T ss_pred HHHhcCCCEEEECCCccCC--CCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcCCCEEEEEcCCC
Confidence 9999999999775322110 0000112566788888 7899976 45 434588888887 55444445443333
No 388
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=94.12 E-value=0.085 Score=54.85 Aligned_cols=71 Identities=21% Similarity=0.361 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
.+..+.++.+.++|++.|.+|.... . ....|+.++.+++.+ ++||++ |++.+.++++.+.+. |+|+|.+|-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G-----~-~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~~~-G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG-----H-SRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALIKA-GADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC-----S-SHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHHHT-TCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC-----c-hHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHHHc-CCCEEEEcC
Confidence 4456678889999999999975421 1 123578899999987 799877 788999999888875 999999853
No 389
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=94.09 E-value=0.3 Score=47.06 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=68.2
Q ss_pred HHHHHHHHHhcccCccEEEEeccC-CChhhHHHHHHHHHHcCccEEEeccCcccccCCCC---------------CccCH
Q 013813 212 LVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK---------------FRADW 275 (436)
Q Consensus 212 ~v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~---------------g~ad~ 275 (436)
.+.+..+.+++.-...+..=+-.| ++.+.+.++++.++++|+|.|.+---..++...++ ..--+
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 455666666554444454444445 56788999999999999999988532222211110 00115
Q ss_pred HHHHHHHhh-CCCcEEEccCCCC-----HHHHHHHHHhcCcceeeeehHHhhC
Q 013813 276 NAIKAVKNA-LRIPVLANGNVRH-----MEDVQKCLEETGCEGVLSAESLLEN 322 (436)
Q Consensus 276 ~~i~~ik~~-~~iPVianGGI~s-----~eda~~~l~~tGaDgVmIGRgal~n 322 (436)
+.++++++. +++||++-|=.+. .+...+.+.+.|+|||.+.---+..
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee 136 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEE 136 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGG
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh
Confidence 778888887 8999988653221 2434444444599999986444433
No 390
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.09 E-value=0.057 Score=52.66 Aligned_cols=91 Identities=14% Similarity=0.209 Sum_probs=59.5
Q ss_pred HHHHHHHhcccC--ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-----C
Q 013813 214 KSLVEKLALNLN--VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-----R 286 (436)
Q Consensus 214 ~eIv~av~~~~~--iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-----~ 286 (436)
.+.++.+++..+ +++.|=++ +. +-++.+.++|+|.|-++.-+. +.++++.+.+ +
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~---tl----eea~eA~~aGaD~I~LDn~~~------------e~l~~av~~l~~~~~~ 240 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE---NL----EDALRAVEAGADIVMLDNLSP------------EEVKDISRRIKDINPN 240 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES---SH----HHHHHHHHTTCSEEEEESCCH------------HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCceEEEEeC---CH----HHHHHHHHcCCCEEEECCCCH------------HHHHHHHHHhhccCCC
Confidence 455666666552 45555432 22 334556679999999886322 3333333322 7
Q ss_pred CcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCcc
Q 013813 287 IPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 287 iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~l 325 (436)
+|+.++|||+ .+.+.++.+ +|+|++.+|.....-|++
T Consensus 241 v~ieASGGIt-~eni~~~a~-tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 241 VIVEVSGGIT-EENVSLYDF-ETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp SEEEEEECCC-TTTGGGGCC-TTCCEEEEGGGTSSCCCC
T ss_pred ceEEEECCCC-HHHHHHHHH-cCCCEEEEeHHHcCCCCc
Confidence 8999999995 688888665 699999999877666653
No 391
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.02 E-value=0.54 Score=45.61 Aligned_cols=121 Identities=17% Similarity=-0.004 Sum_probs=81.4
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC-CChhhHHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYA 245 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~a 245 (436)
|.+.+.+-++ +++.|+|+|=++. .-|-+..-..+.-.++++.+.+.++- |.+. .| .+..++++++
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~eEr~~v~~~~~~~~~g-viaG--vg~~~t~~ai~la 84 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNG----------TTGLGPSLSPEEKLENLKAVYDVTNK-IIFQ--VGGLNLDDAIRLA 84 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHTTCSC-EEEE--CCCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHcCC-EEEe--cCCCCHHHHHHHH
Confidence 5666777775 4567999998873 23444455667778888888877754 6666 44 3568899999
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec----cCC-CCHHHHHH
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN----GNV-RHMEDVQK 303 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an----GGI-~s~eda~~ 303 (436)
+.++++|+|++.+..-..... .+...-+++.+.|.+.+++||+ +| -|+ -+++.+.+
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~--~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAPYYYPR--MSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHGGGSCCSEEEEECCCSCSS--CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCCCC--CCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 999999999997753221100 0001125667788888899986 44 243 57777766
No 392
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=93.98 E-value=0.14 Score=51.66 Aligned_cols=104 Identities=14% Similarity=0.216 Sum_probs=63.3
Q ss_pred ccCChHHHH--HHHHHHhcccCccEEEEecc----C-CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCcc-----
Q 013813 206 LMDNLPLVK--SLVEKLALNLNVPVSCKIRV----F-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRA----- 273 (436)
Q Consensus 206 Ll~~p~~v~--eIv~av~~~~~iPVsVKiRl----g-~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~a----- 273 (436)
.+.+|+... ++++.. +-+.|+..-+.. + ++.+...+.++ ..+++++.||--.........|..
T Consensus 100 ~l~~~~~~~s~~~vr~~--ap~~~~~anlg~~ql~~~~~~~~~~~av~---~~~a~al~Ihln~~~~~~~p~g~~~~~~~ 174 (368)
T 3vkj_A 100 AIEKAEARESFAIVRKV--APTIPIIANLGMPQLVKGYGLKEFQDAIQ---MIEADAIAVHLNPAQEVFQPEGEPEYQIY 174 (368)
T ss_dssp HHHCGGGSHHHHHHHHH--CSSSCEEEEEEGGGGGTTCCHHHHHHHHH---HTTCSEEEEECCHHHHHHSSSCCCBCBTH
T ss_pred ccCCHHHHhhHHHHHHh--CcCcceecCcCeeecCCCCCHHHHHHHHH---HhcCCCeEEEecchhhhhCCCCCchhhHH
Confidence 334555433 334432 346788777655 3 55454444444 346667777643221100011112
Q ss_pred CHHHHHHHHhhCCCcEEEc--cCCCCHHHHHHHHHhcCcceeee
Q 013813 274 DWNAIKAVKNALRIPVLAN--GNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 274 d~~~i~~ik~~~~iPVian--GGI~s~eda~~~l~~tGaDgVmI 315 (436)
.++.|+.+++.+++||++= |+..++++++.+.+. |+|+|.+
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~a-Gad~I~V 217 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGISMETAKLLYSY-GIKNFDT 217 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHT-TCCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhC-CCCEEEE
Confidence 3678999999999999984 655789999998875 9999988
No 393
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.96 E-value=0.26 Score=48.57 Aligned_cols=92 Identities=12% Similarity=0.180 Sum_probs=67.9
Q ss_pred ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCc
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIP 288 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iP 288 (436)
+++.+.+.++.+++.++.|+.|.+-.. + .+..+.++.+.++|+|.|.+|+.. + .+.++.+++ .++|
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~-~~~~~~~~~a~~~g~d~V~~~~g~---------p--~~~i~~l~~-~g~~ 112 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S-PFVEDIVDLVIEEGVKVVTTGAGN---------P--SKYMERFHE-AGII 112 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S-TTHHHHHHHHHHTTCSEEEECSSC---------G--GGTHHHHHH-TTCE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C-CCHHHHHHHHHHCCCCEEEECCCC---------h--HHHHHHHHH-cCCe
Confidence 577788888888877778998886441 1 234466778889999999999752 1 234667766 4788
Q ss_pred EEEccCCCCHHHHHHHHHhcCcceeee-eh
Q 013813 289 VLANGNVRHMEDVQKCLEETGCEGVLS-AE 317 (436)
Q Consensus 289 VianGGI~s~eda~~~l~~tGaDgVmI-GR 317 (436)
|+. .|.+.++++.+.+. |+|+|.+ |.
T Consensus 113 v~~--~v~~~~~a~~~~~~-GaD~i~v~g~ 139 (332)
T 2z6i_A 113 VIP--VVPSVALAKRMEKI-GADAVIAEGM 139 (332)
T ss_dssp EEE--EESSHHHHHHHHHT-TCSCEEEECT
T ss_pred EEE--EeCCHHHHHHHHHc-CCCEEEEECC
Confidence 885 47899999887775 9999988 53
No 394
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.93 E-value=0.15 Score=49.30 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=65.4
Q ss_pred cCccEEEEeccCCChhhHHHHHHHHHHcCccEEEecc-Cccccc--CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHH
Q 013813 224 LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHG-RTRDEK--DGKKFRADWNAIKAVKNALRIPVLANGNVRHMED 300 (436)
Q Consensus 224 ~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHg-Rt~~~~--~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~ed 300 (436)
...|+.+-++. .++++.+.++|++.|.+-. ...+.. .+.....+.+.++++++.+++|++.++++.+.++
T Consensus 20 ~~~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~ 92 (297)
T 2zbt_A 20 FKGGVIMDVTT-------PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVE 92 (297)
T ss_dssp GTTEEEEEESS-------HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHH
T ss_pred hhCCeeeeech-------HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHH
Confidence 34566655443 6789999999999997621 111100 0101123578899999999999999988888888
Q ss_pred HHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 301 VQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 301 a~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++.+++. |||+| .|......|.+++.++
T Consensus 93 ~~~~~~a-Gad~v-~~~~~~~~~~~~~~~~ 120 (297)
T 2zbt_A 93 AMILEAI-GVDFI-DESEVLTPADEEHHID 120 (297)
T ss_dssp HHHHHHT-TCSEE-EEETTSCCSCSSCCCC
T ss_pred HHHHHHC-CCCEE-eeeCCCChHHHHHHHH
Confidence 8888875 99999 4544333455555554
No 395
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.88 E-value=0.098 Score=55.13 Aligned_cols=72 Identities=19% Similarity=0.302 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
.+..+-++.|.++|+|.|+|..-... + ..-++.++.+++.. +++ +..|+|-|.+.++.+++. |||+|-+|-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGh-----s-~~v~~~i~~ik~~~p~~~-viaGNVaT~e~a~~Li~a-GAD~vkVGi 351 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGN-----S-VYQIEFIKWIKQTYPKID-VIAGNVVTREQAAQLIAA-GADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCC-----S-HHHHHHHHHHHHHCTTSE-EEEEEECSHHHHHHHHHH-TCSEEEECS
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccc-----c-HHHHHHHHHHHhhCCcce-EEeccccCHHHHHHHHHc-CCCEEeecC
Confidence 45677889999999999988422111 0 12368889998876 555 557899999999999886 999998885
Q ss_pred H
Q 013813 318 S 318 (436)
Q Consensus 318 g 318 (436)
|
T Consensus 352 G 352 (556)
T 4af0_A 352 G 352 (556)
T ss_dssp S
T ss_pred C
Confidence 5
No 396
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=93.88 E-value=1.3 Score=43.33 Aligned_cols=186 Identities=15% Similarity=0.168 Sum_probs=102.3
Q ss_pred CCcEEEccCCCCCcH-HHHHHHHHhCCCeEE----eCcccchhhccChhhhhhhhhccCCCCCEEEEecCCC-HHHHHHH
Q 013813 102 RPKLIVAPMVDNSEL-PFRMLCRRYGAEAAY----TPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCAND-PEILLNA 175 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~-~fR~l~~~~Ga~l~~----Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d-~e~~~~A 175 (436)
.+++++| .++++. .-..++.+.+...++ +|++.+. ...... .++.. .+.++++=+=-.| |+....+
T Consensus 24 ~~~LiVA--LD~~~~~eal~l~~~l~~~v~~vKVG~~lf~~~----G~~~V~-~Lk~~-~g~~IflDlKl~DIpnTv~~a 95 (303)
T 3ru6_A 24 AMKLCVA--LDLSTKEECLQLAKELKNLDIWLKVGLRAYLRD----GFKFIE-ELKKV-DDFKIFLDLKFHDIPNTMADA 95 (303)
T ss_dssp CCEEEEE--CCCSSHHHHHHHHHHTTTSSCEEEECHHHHHHH----THHHHH-HHHHH-CCCEEEEEEEECSCHHHHHHH
T ss_pred CCCEEEE--eCCCCHHHHHHHHHHhCCCccEEEeCHHHHHHh----CHHHHH-HHHHh-hCCCEEEEeeeccCchhHHHH
Confidence 5677776 355443 234566677654333 3332221 111111 12211 1566776665555 5566666
Q ss_pred HHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEE--EEeccCCCh------------hh
Q 013813 176 ARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVS--CKIRVFPNL------------QD 240 (436)
Q Consensus 176 A~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVs--VKiRlg~~~------------~d 240 (436)
++.+. .|+|.|.+|. +|+ ++.+...++..++.-..|.. |-+-...+. +.
T Consensus 96 v~~~a~lGaD~vTVHa-----------~~G-----~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~ 159 (303)
T 3ru6_A 96 CEEVSKLGVDMINIHA-----------SAG-----KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEA 159 (303)
T ss_dssp HHHHHTTTCSEEEEEG-----------GGC-----HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHH
T ss_pred HHHHHhcCCCEEEEec-----------cCC-----HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHH
Confidence 66554 4999999994 221 34455555555433222222 211122221 22
Q ss_pred HHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEccCCCCHH----------HHHHHHHhcC
Q 013813 241 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHME----------DVQKCLEETG 309 (436)
Q Consensus 241 ~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianGGI~s~e----------da~~~l~~tG 309 (436)
...+|+...++|+++++..+ .+ ++.|++..+ -.++..+||+-.. .+.++++. |
T Consensus 160 V~~lA~~a~~~G~dGvV~s~------------~E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~a-G 223 (303)
T 3ru6_A 160 VINFSKISYENGLDGMVCSV------------FE---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMAREN-L 223 (303)
T ss_dssp HHHHHHHHHHTTCSEEECCT------------TT---HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHT-T
T ss_pred HHHHHHHHHHcCCCEEEECH------------HH---HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHc-C
Confidence 34677888899999976621 11 456676653 4578889987221 34455665 9
Q ss_pred cceeeeehHHhhCCccch
Q 013813 310 CEGVLSAESLLENPALFA 327 (436)
Q Consensus 310 aDgVmIGRgal~nP~lf~ 327 (436)
+|.+++||+++..++-..
T Consensus 224 Ad~iVvGr~I~~a~dp~~ 241 (303)
T 3ru6_A 224 SDYIVVGRPIYKNENPRA 241 (303)
T ss_dssp CSEEEECHHHHTSSCHHH
T ss_pred CCEEEEChHHhCCCCHHH
Confidence 999999999998766433
No 397
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=93.87 E-value=0.45 Score=45.58 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=59.3
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
+.+...+-| +.+++|+|.||||+| +......+.+.+++..+...+++||+|-.. + .+.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g------------~~~v~~~ee~~rvv~~i~~~~~~pisIDT~------~-~~v~~ 83 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVG------------PAVQDKVSAMEWLVEVTQEVSNLTLCLDST------N-IKAIE 83 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECS------C-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCC------------CCCCChHHHHHHHHHHHHHhCCCeEEEeCC------C-HHHHH
Confidence 455555545 567789999999974 333456788899999998877999999832 1 13344
Q ss_pred HHHHc--CccEEE-eccCcccccCCCCCccCHHHHHHHHhhCCCcEEE
Q 013813 247 MLEDA--GCSLLA-VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 291 (436)
Q Consensus 247 ~le~a--G~d~I~-VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia 291 (436)
.+.++ |++.|. |.|-. -+++.+..+....+.|+++
T Consensus 84 aAl~a~~Ga~iINdvs~~~----------d~~~~~~~~~a~~~~~vvl 121 (262)
T 1f6y_A 84 AGLKKCKNRAMINSTNAER----------EKVEKLFPLAVEHGAALIG 121 (262)
T ss_dssp HHHHHCSSCEEEEEECSCH----------HHHHHHHHHHHHTTCEEEE
T ss_pred HHHhhCCCCCEEEECCCCc----------ccHHHHHHHHHHhCCcEEE
Confidence 44455 888773 55431 1232344455556788776
No 398
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.85 E-value=0.091 Score=53.33 Aligned_cols=69 Identities=22% Similarity=0.319 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+..+.++.+.++|+|.|.++.-. +.+ ...|+.++.+++.+ ++||++ |++.+.++++.+.+. |+|+|.+|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-----g~~-~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~~~-Gad~I~vg 222 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-----GHS-TRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLISV-GADCLKVG 222 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-----CSS-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHTT-TCSEEEEC
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-----CCh-HHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHHhc-CCCEEEEC
Confidence 34566778889999999985321 111 23478899999988 899987 778999999988875 99999994
No 399
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=93.82 E-value=0.35 Score=49.24 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=85.4
Q ss_pred HcCCCcEEEEecCC-CchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccE
Q 013813 179 VEPYCDYVDINLGC-PQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSL 255 (436)
Q Consensus 179 v~~g~D~IdLN~GC-P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~ 255 (436)
.+.|+..+-+..|- |. .|. .+++.-.+.++++++.+ ++++.|...-+++..+++++++.+++.++.+
T Consensus 171 ~~~Gf~~~K~Kv~~g~~-------~g~---~~~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~ 240 (404)
T 3ekg_A 171 QKMGFIGGKMPLHHGPS-------EGE---EGLKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGLKW 240 (404)
T ss_dssp HHTTCSEEEEECCCCGG-------GHH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCE
T ss_pred HHcCCCEEEEecCCCCc-------ccc---ccHHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcE
Confidence 35689998887641 21 011 12345566778888877 5788888888899999999999999999887
Q ss_pred EEeccCcccccCCCCCccCHHHHHHHHhhCCCcE-EEcc-CCCCHHHHHHHHHhcCcceeee
Q 013813 256 LAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPV-LANG-NVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 256 I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPV-ianG-GI~s~eda~~~l~~tGaDgVmI 315 (436)
| ++... +-|++..+++++.+++|| |+.| .+.+..++.++++...+|.|++
T Consensus 241 i-------EeP~~---~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~ 292 (404)
T 3ekg_A 241 I-------EEALP---PDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQP 292 (404)
T ss_dssp E-------ECCSC---TTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred E-------ecCCC---cccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEec
Confidence 7 22111 347888999999988884 4444 5889999999999867888764
No 400
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.75 E-value=0.82 Score=44.45 Aligned_cols=127 Identities=18% Similarity=0.165 Sum_probs=83.4
Q ss_pred CCHHHHHHHH---HHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHH
Q 013813 167 NDPEILLNAA---RRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTI 242 (436)
Q Consensus 167 ~d~e~~~~AA---~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~ 242 (436)
.+.+++.... +.+ +.|+|+|-+.+--|.. --|.+.+.++++... +++|+.= |..+...+..
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg-----------~iD~~~~~~Li~~a~---~l~vTFH-RAFD~~~d~~ 169 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTEDG-----------HIDKELCMSLMAICR---PLPVTFH-RAFDMVHDPM 169 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----------CBCHHHHHHHHHHHT---TSCEEEC-GGGGGCSCHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC-----------CcCHHHHHHHHHHcC---CCcEEEE-CchhccCCHH
Confidence 3455555444 333 4599998876533431 136788888888754 3677654 3332223456
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+..+.+.+.|++.|-.+|-.... ...++.++++.+.. +|+|++.|||+ .+.+.++++.+|++.+=.
T Consensus 170 ~Ale~Li~lGvdrILTSG~~~~a------~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCDSSA------LEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATEFHC 237 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTSSST------TTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHcCCCEEECCCCCCCh------HHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCEEeE
Confidence 66777888899999777752221 23467777776654 49999999997 477888888789987654
No 401
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.75 E-value=0.21 Score=45.24 Aligned_cols=81 Identities=17% Similarity=0.248 Sum_probs=60.6
Q ss_pred ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEccCCCCHHHHHHH
Q 013813 226 VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANGNVRHMEDVQKC 304 (436)
Q Consensus 226 iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianGGI~s~eda~~~ 304 (436)
.|+.+=+|. .+.++..++++.+.+.|++.|.+|.++.. ..+.++.+++..+ -.+++.|-+.++++++.+
T Consensus 10 ~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~~~---------~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a 79 (205)
T 1wa3_A 10 HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTVPD---------ADTVIKELSFLKEKGAIIGAGTVTSVEQCRKA 79 (205)
T ss_dssp HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTSTT---------HHHHHHHTHHHHHTTCEEEEESCCSHHHHHHH
T ss_pred CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCChh---------HHHHHHHHHHHCCCCcEEEecccCCHHHHHHH
Confidence 366555554 46688899999999999999999977521 1355777877642 235677788999999999
Q ss_pred HHhcCcceeeeehH
Q 013813 305 LEETGCEGVLSAES 318 (436)
Q Consensus 305 l~~tGaDgVmIGRg 318 (436)
.+. |+|.| ++-+
T Consensus 80 ~~~-Gad~i-v~~~ 91 (205)
T 1wa3_A 80 VES-GAEFI-VSPH 91 (205)
T ss_dssp HHH-TCSEE-ECSS
T ss_pred HHc-CCCEE-EcCC
Confidence 886 99999 7644
No 402
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=93.74 E-value=0.6 Score=45.18 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=59.2
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCcc-EEEeccCcccccC--CCCCc--cCHHHHHHHHhhCCCcEEE--ccCCCC
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCS-LLAVHGRTRDEKD--GKKFR--ADWNAIKAVKNALRIPVLA--NGNVRH 297 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d-~I~VHgRt~~~~~--~~~g~--ad~~~i~~ik~~~~iPVia--nGGI~s 297 (436)
+.|+.+-+. +.+.++..+.++.++++|+| +|.+|--...... .+.+. .-++.++.+++.+++||+. ..++ +
T Consensus 93 ~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~-~ 170 (311)
T 1jub_A 93 EGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF-D 170 (311)
T ss_dssp SSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC-S
T ss_pred CCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCC-C
Confidence 688888764 56778889999999999999 9999753211100 01001 1146677777777889874 5555 5
Q ss_pred HHHH---HHHHHhcCcceeeee
Q 013813 298 MEDV---QKCLEETGCEGVLSA 316 (436)
Q Consensus 298 ~eda---~~~l~~tGaDgVmIG 316 (436)
.+++ .+.+++.|+|+|.+-
T Consensus 171 ~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 171 LVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp HHHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEec
Confidence 5554 344555699998763
No 403
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.70 E-value=0.41 Score=46.20 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=66.3
Q ss_pred HHHHHHHHHhcccCccEEEEeccC-CChhhHHHHHHHHHHcCccEEEeccCcccccCCCC---------------CccCH
Q 013813 212 LVKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK---------------FRADW 275 (436)
Q Consensus 212 ~v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~---------------g~ad~ 275 (436)
.+.+.++.+++.-...+..=+-.| ++.+.+.++++.++++|+|.|-+---..++...++ ..--+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 456666776655444555554455 57889999999999999999988432222211110 01125
Q ss_pred HHHHHHHhh-CCCcEEEccCCC-----CHHHHHHHHHhcCcceeeeeh
Q 013813 276 NAIKAVKNA-LRIPVLANGNVR-----HMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 276 ~~i~~ik~~-~~iPVianGGI~-----s~eda~~~l~~tGaDgVmIGR 317 (436)
+.++++++. +++||++-|=.+ ..+...+.+.+.|+|||.+.-
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipD 133 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIAD 133 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECC
Confidence 778888887 799998865221 224333334445999999853
No 404
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.67 E-value=0.6 Score=45.27 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=68.1
Q ss_pred EEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEE-EEeccCC--
Q 013813 161 FVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVS-CKIRVFP-- 236 (436)
Q Consensus 161 ivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVs-VKiRlg~-- 236 (436)
++-+...|.- .|++++ .|+|.| + .|....++.-| |-.-+.-..+.+...+++|++.++.|+. +.+-.|.
T Consensus 36 i~~~tayDa~----sA~l~e~aG~d~i-l-vGdSl~~~~lG-~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~ 108 (281)
T 1oy0_A 36 WAMLTAYDYS----TARIFDEAGIPVL-L-VGDSAANVVYG-YDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYE 108 (281)
T ss_dssp EEEEECCSHH----HHHHHHTTTCCEE-E-ECTTHHHHTTC-CSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSST
T ss_pred EEEEeCcCHH----HHHHHHHcCCCEE-E-ECHHHHHHHcC-CCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCccc
Confidence 3456666754 245554 489998 4 46555554433 4445555667777778888887775654 4433322
Q ss_pred -ChhhHHHH-HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE
Q 013813 237 -NLQDTIKY-AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL 290 (436)
Q Consensus 237 -~~~d~~~~-ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi 290 (436)
+.+++.+- .+.++++|+++|.+-+.. .-.+.|+.+.+. +|||+
T Consensus 109 ~s~~~a~~na~rl~~eaGa~aVklEdg~----------e~~~~I~al~~a-gIpV~ 153 (281)
T 1oy0_A 109 AGPTAALAAATRFLKDGGAHAVKLEGGE----------RVAEQIACLTAA-GIPVM 153 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCCSEEEEEBSG----------GGHHHHHHHHHH-TCCEE
T ss_pred CCHHHHHHHHHHHHHHhCCeEEEECCcH----------HHHHHHHHHHHC-CCCEE
Confidence 34555553 455566999999997652 113456666553 78887
No 405
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.65 E-value=0.51 Score=44.15 Aligned_cols=89 Identities=22% Similarity=0.244 Sum_probs=65.9
Q ss_pred cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHH
Q 013813 227 PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 306 (436)
Q Consensus 227 PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~ 306 (436)
|+..=+|. .+.++..++++.+.+.|++.|.+.-++. ...+.++++++...--+++.|-+.+.++++.+++
T Consensus 18 ~ii~vir~-~~~~~~~~~~~al~~gGv~~iel~~k~~---------~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~ 87 (224)
T 1vhc_A 18 KIVPVIAL-DNADDILPLADTLAKNGLSVAEITFRSE---------AAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKS 87 (224)
T ss_dssp CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHH
T ss_pred CeEEEEeC-CCHHHHHHHHHHHHHcCCCEEEEeccCc---------hHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHH
Confidence 55554555 4668889999999999999998864432 2356788888876445677778999999999998
Q ss_pred hcCcceeeeehHHhhCCccchhh
Q 013813 307 ETGCEGVLSAESLLENPALFAGF 329 (436)
Q Consensus 307 ~tGaDgVmIGRgal~nP~lf~~i 329 (436)
. |||+|.+|. .|+.+....
T Consensus 88 a-GAd~v~~p~---~d~~v~~~a 106 (224)
T 1vhc_A 88 S-GADFVVTPG---LNPKIVKLC 106 (224)
T ss_dssp H-TCSEEECSS---CCHHHHHHH
T ss_pred C-CCCEEEECC---CCHHHHHHH
Confidence 7 999999883 455544433
No 406
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=93.61 E-value=1.1 Score=43.51 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=91.6
Q ss_pred EEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC-Ch
Q 013813 161 FVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-NL 238 (436)
Q Consensus 161 ivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~-~~ 238 (436)
++=+...|.-. |++++ .|||+|=+--. ...++ -|+-....-..+.+...++.|.+.+++||++-+-.|. +.
T Consensus 17 i~~~~a~D~~s----A~~~~~aG~~ai~vs~~-~~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~ 89 (290)
T 2hjp_A 17 FTAMAAHNPLV----AKLAEQAGFGGIWGSGF-ELSAS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNA 89 (290)
T ss_dssp EEEEECSSHHH----HHHHHHHTCSEEEECHH-HHHHH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSH
T ss_pred EEEecCCCHHH----HHHHHHcCCCEEEEChH-HHHHh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCH
Confidence 34466667543 33443 48998876521 11112 2233333456778888889999999999999988874 45
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCC-----CCccCH-HHHHHHH---hhC---CCcEEEccCCC----CHHHHH
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGK-----KFRADW-NAIKAVK---NAL---RIPVLANGNVR----HMEDVQ 302 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~-----~g~ad~-~~i~~ik---~~~---~iPVianGGI~----s~eda~ 302 (436)
+++.+.++.+.++|+++|.+-+.....+.+. +.-... +.+.+|+ +.. +.-|++=-+-. ..+++.
T Consensus 90 ~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai 169 (290)
T 2hjp_A 90 VNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAV 169 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHH
Confidence 6778889999999999999976653211111 111222 3344444 432 33344433322 134443
Q ss_pred ----HHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 303 ----KCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 303 ----~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
.+.+ .|||+|++=-+ +.++..++++.
T Consensus 170 ~Ra~ay~e-AGAd~i~~e~~-~~~~~~~~~i~ 199 (290)
T 2hjp_A 170 RRGQAYEE-AGADAILIHSR-QKTPDEILAFV 199 (290)
T ss_dssp HHHHHHHH-TTCSEEEECCC-CSSSHHHHHHH
T ss_pred HHHHHHHH-cCCcEEEeCCC-CCCHHHHHHHH
Confidence 3334 49999987321 24455555544
No 407
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=93.59 E-value=0.56 Score=46.77 Aligned_cols=96 Identities=11% Similarity=0.088 Sum_probs=68.5
Q ss_pred CChHHHHHHHHHHhcccCccEEEEeccCCC---------------------------------hhhHHHHHHHHHHcCcc
Q 013813 208 DNLPLVKSLVEKLALNLNVPVSCKIRVFPN---------------------------------LQDTIKYAKMLEDAGCS 254 (436)
Q Consensus 208 ~~p~~v~eIv~av~~~~~iPVsVKiRlg~~---------------------------------~~d~~~~ak~le~aG~d 254 (436)
..++.+.+.++.+++.++.|+.|.+=.... .....+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 357888888888887777777776522111 01134567778889999
Q ss_pred EEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee-eh
Q 013813 255 LLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS-AE 317 (436)
Q Consensus 255 ~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI-GR 317 (436)
.|.+|+.. ..++.++.+++ .+++|+. .+.+.++++.+.+. |+|+|.+ |+
T Consensus 125 ~V~~~~g~----------~~~~~i~~~~~-~g~~v~~--~v~t~~~a~~a~~~-GaD~i~v~g~ 174 (369)
T 3bw2_A 125 VVSFHFGV----------PDREVIARLRR-AGTLTLV--TATTPEEARAVEAA-GADAVIAQGV 174 (369)
T ss_dssp EEEEESSC----------CCHHHHHHHHH-TTCEEEE--EESSHHHHHHHHHT-TCSEEEEECT
T ss_pred EEEEeCCC----------CcHHHHHHHHH-CCCeEEE--ECCCHHHHHHHHHc-CCCEEEEeCC
Confidence 99998642 23577888876 4778776 57899999887775 9999998 64
No 408
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.56 E-value=1.6 Score=40.90 Aligned_cols=130 Identities=18% Similarity=0.250 Sum_probs=74.8
Q ss_pred EEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cCc--c--EEEEecc
Q 013813 162 VQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNV--P--VSCKIRV 234 (436)
Q Consensus 162 vQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~i--P--VsVKiRl 234 (436)
+-++ ..|+....+++.+ +.|+|.|.+|.- ++ .+.+..+++.+++. .+. | +.|-...
T Consensus 61 ~kl~-Dip~t~~~~~~~~~~~Gad~vtvH~~-----------~g-----~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~t 123 (239)
T 1dbt_A 61 LKLH-DIPTTVNKAMKRLASLGVDLVNVHAA-----------GG-----KKMMQAALEGLEEGTPAGKKRPSLIAVTQLT 123 (239)
T ss_dssp EEEC-SCHHHHHHHHHHHHTTTCSEEEEEGG-----------GC-----HHHHHHHHHHHHHHSCTTSCCCEEEEECSCT
T ss_pred eccc-cchHHHHHHHHHHHhcCCCEEEEeCc-----------CC-----HHHHHHHHHHHHhhhccCCCCccEEEEEEcC
Confidence 5665 5677777666544 568999999952 11 12344555555443 133 4 4444333
Q ss_pred CCChhhH--------------HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHH
Q 013813 235 FPNLQDT--------------IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHME 299 (436)
Q Consensus 235 g~~~~d~--------------~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~e 299 (436)
..+.++. ..++....+.|.+.++... +.++.+++.. +.+++..|||+.-.
T Consensus 124 s~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~---------------~~i~~lr~~~~~~~i~v~gGI~~~~ 188 (239)
T 1dbt_A 124 STSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV---------------HEAKAIYQAVSPSFLTVTPGIRMSE 188 (239)
T ss_dssp TCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG---------------GGHHHHTTTSCTTCEEEECCBCCTT
T ss_pred CCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH---------------HHHHHHHHhcCCCcEEEeCCcCCCC
Confidence 2221111 1222223456666654332 1245566655 36899999998533
Q ss_pred H----------HHHHHHhcCcceeeeehHHhhCCc
Q 013813 300 D----------VQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 300 d----------a~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
. ..++++. |+|.+.+||+++..++
T Consensus 189 ~~~~dq~rv~tp~~a~~a-Gad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 189 DAANDQVRVATPAIAREK-GSSAIVVGRSITKAED 222 (239)
T ss_dssp SCCTTCSSCBCHHHHHHT-TCSEEEECHHHHTSSC
T ss_pred CCccceeccCCHHHHHHc-CCCEEEEChhhcCCCC
Confidence 2 2666765 9999999999998665
No 409
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.50 E-value=0.59 Score=47.06 Aligned_cols=43 Identities=23% Similarity=0.601 Sum_probs=38.2
Q ss_pred ccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 272 RADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 272 ~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
..+|+.|+.+++.+++||+.- ||.+.++++.+.+. |+|+|.++
T Consensus 211 ~~~~~~i~~i~~~~~~Pv~vk-gv~t~e~a~~a~~a-Gad~I~vs 253 (380)
T 1p4c_A 211 SFNWEALRWLRDLWPHKLLVK-GLLSAEDADRCIAE-GADGVILS 253 (380)
T ss_dssp TCCHHHHHHHHHHCCSEEEEE-EECCHHHHHHHHHT-TCSEEEEC
T ss_pred cccHHHHHHHHHhcCCCEEEE-ecCcHHHHHHHHHc-CCCEEEEc
Confidence 467999999999999999976 48999999999986 99999994
No 410
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.32 E-value=0.29 Score=45.99 Aligned_cols=81 Identities=21% Similarity=0.179 Sum_probs=53.4
Q ss_pred HHHHcCccEEEeccCcccccCC--CCCccC-HHHHH-HHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhh
Q 013813 247 MLEDAGCSLLAVHGRTRDEKDG--KKFRAD-WNAIK-AVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLE 321 (436)
Q Consensus 247 ~le~aG~d~I~VHgRt~~~~~~--~~g~ad-~~~i~-~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~ 321 (436)
.+...+.+.|-+-.|..-+... .+..++ .+.+. .+++.. +++|++.|||++.++++.+... |+||+.||++++.
T Consensus 132 ~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~-~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 132 AVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIEL-GTVGVLLASGVTK 210 (225)
T ss_dssp HHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEESHHHHT
T ss_pred HHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhC-CCCEEEeCHHHHC
Confidence 3456677777777765543210 111222 22222 233333 6899999999999999888775 9999999999998
Q ss_pred CCccchh
Q 013813 322 NPALFAG 328 (436)
Q Consensus 322 nP~lf~~ 328 (436)
-+++..-
T Consensus 211 a~~~~~~ 217 (225)
T 1hg3_A 211 AKDPEKA 217 (225)
T ss_dssp CSSHHHH
T ss_pred CcCHHHH
Confidence 7765543
No 411
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.26 E-value=0.53 Score=45.50 Aligned_cols=157 Identities=16% Similarity=0.135 Sum_probs=94.2
Q ss_pred EEEecCCCHHHHHHHHHHHc-CCCcEEEEe-cCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC--
Q 013813 161 FVQFCANDPEILLNAARRVE-PYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP-- 236 (436)
Q Consensus 161 ivQL~g~d~e~~~~AA~~v~-~g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~-- 236 (436)
++=+...|.-. |++++ .|||.|=+- .+.- . .-||-....-..+.+...++.|.+.+++||++-+-.|.
T Consensus 18 i~~~~a~D~~s----A~~~~~aG~~ai~vsg~s~a--~--~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~ 89 (275)
T 2ze3_A 18 FLLPNAWDVAS----ARLLEAAGFTAIGTTSAGIA--H--ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGH 89 (275)
T ss_dssp EEECEESSHHH----HHHHHHHTCSCEEECHHHHH--H--HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSS
T ss_pred eeEecccCHHH----HHHHHHcCCCEEEECcHHHH--H--hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCC
Confidence 44455566543 23333 488888776 2211 1 12233333446677888888888888999999998874
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCH----HHHHHHHhh---CCCcEEEccCCCCH---------HH
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW----NAIKAVKNA---LRIPVLANGNVRHM---------ED 300 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~----~~i~~ik~~---~~iPVianGGI~s~---------ed 300 (436)
+.+++.+.++.+.++|+.+|.+-+..... + +.-.+. +.|+.+++. .++|++.+|..... +.
T Consensus 90 ~~~~~~~~v~~l~~aGaagv~iED~~~~~--~-k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~ 166 (275)
T 2ze3_A 90 APEDVRRTVEHFAALGVAGVNLEDATGLT--P-TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEER 166 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCSSS--S-SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCcCCC--C-CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhh
Confidence 45678888999999999999997654311 1 111222 233444433 26888888865541 12
Q ss_pred HHHHH------HhcCcceeeeehHHhhCCccchhhh
Q 013813 301 VQKCL------EETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 301 a~~~l------~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
+++++ .+.|||+|++= + +.++..++++.
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e-~-~~~~~~~~~i~ 200 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVP-L-ALQSQDIRALA 200 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECT-T-CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEC-C-CCCHHHHHHHH
Confidence 33322 23499999873 2 34445555554
No 412
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=93.25 E-value=0.69 Score=42.86 Aligned_cols=87 Identities=25% Similarity=0.345 Sum_probs=66.0
Q ss_pred cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHH
Q 013813 227 PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLE 306 (436)
Q Consensus 227 PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~ 306 (436)
||..=+|. .+.++..++++.+.+.|++.|.+.-++. ...+.++++++...-.+++.|-|.+.++++.+++
T Consensus 17 ~~i~v~r~-~~~~~~~~~~~al~~gGv~~iel~~k~~---------~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~ 86 (214)
T 1wbh_A 17 PVVPVIVV-KKLEHAVPMAKALVAGGVRVLNVTLRTE---------CAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTE 86 (214)
T ss_dssp SEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEESCST---------THHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHH
T ss_pred CEEEEEEC-CCHHHHHHHHHHHHHcCCCEEEEeCCCh---------hHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHH
Confidence 55555555 4567889999999999999998875432 2256788888877555777888999999999999
Q ss_pred hcCcceeeeehHHhhCCccch
Q 013813 307 ETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 307 ~tGaDgVmIGRgal~nP~lf~ 327 (436)
. |||+|.+|. .++.+..
T Consensus 87 a-GAd~v~~p~---~d~~v~~ 103 (214)
T 1wbh_A 87 A-GAQFAISPG---LTEPLLK 103 (214)
T ss_dssp H-TCSCEEESS---CCHHHHH
T ss_pred c-CCCEEEcCC---CCHHHHH
Confidence 7 999999883 4555443
No 413
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.24 E-value=0.47 Score=48.06 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=72.1
Q ss_pred ccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc-cEEEeccCcccccCCCCCccCHHHHHH
Q 013813 202 YGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC-SLLAVHGRTRDEKDGKKFRADWNAIKA 280 (436)
Q Consensus 202 ~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~-d~I~VHgRt~~~~~~~~g~ad~~~i~~ 280 (436)
-||.-++|..+++++- ..++||.+|.-.. +.++....++.+.+.|. +.+.+|+-+.-+. .....|+..|..
T Consensus 140 IgS~~~~N~pLL~~va-----~~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt--p~~~~nL~aI~~ 211 (385)
T 1vli_A 140 IASYEINHLPLLKYVA-----RLNRPMIFSTAGA-EISDVHEAWRTIRAEGNNQIAIMHCVAKYPA--PPEYSNLSVIPM 211 (385)
T ss_dssp ECGGGTTCHHHHHHHH-----TTCSCEEEECTTC-CHHHHHHHHHHHHTTTCCCEEEEEECSSSSC--CGGGCCTTHHHH
T ss_pred ECcccccCHHHHHHHH-----hcCCeEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEEeccCCCCC--ChhhcCHHHHHH
Confidence 3677788988877664 3589999996554 77888888889999998 6666686433222 122578999999
Q ss_pred HHhhC-CCcEEEccCCCC-HHHHHHHHHhcCcc
Q 013813 281 VKNAL-RIPVLANGNVRH-MEDVQKCLEETGCE 311 (436)
Q Consensus 281 ik~~~-~iPVianGGI~s-~eda~~~l~~tGaD 311 (436)
+++.. ++||..++=-.. ..-+...+.. ||+
T Consensus 212 Lk~~f~~lpVG~SdHt~G~~~~~~AAvAl-GA~ 243 (385)
T 1vli_A 212 LAAAFPEAVIGFSDHSEHPTEAPCAAVRL-GAK 243 (385)
T ss_dssp HHHHSTTSEEEEEECCSSSSHHHHHHHHT-TCS
T ss_pred HHHHcCCCCEEeCCCCCCchHHHHHHHHc-CCC
Confidence 99998 899977653333 4555566654 888
No 414
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=93.12 E-value=1.4 Score=41.35 Aligned_cols=130 Identities=13% Similarity=0.187 Sum_probs=74.0
Q ss_pred EEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cC--cc--EEEEecc
Q 013813 162 VQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LN--VP--VSCKIRV 234 (436)
Q Consensus 162 vQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~--iP--VsVKiRl 234 (436)
+-++ ..|+....+++.+ +.|+|.|.+|.-. | .+.+...++.+++. .+ .+ +.|....
T Consensus 62 ~kl~-Dip~t~~~~~~~~~~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~~~~G~~~~~~lav~~~T 124 (246)
T 2yyu_A 62 LKLH-DIPNTVKQAMKGLARVGADLVNVHAAG----------G------RRMMEAAIEGLDAGTPSGRMRPRCIAVTQLT 124 (246)
T ss_dssp EEEC-SCHHHHHHHHHHHHHTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCSSSCCCEEEEESSCT
T ss_pred eecc-cchHHHHHHHHHHHhcCCCEEEEECCC----------C------HHHHHHHHHHHHhhcccCCcCCCEEEEEeCC
Confidence 5565 5677766666544 5689999999521 1 23345566666541 23 34 3333222
Q ss_pred CCChhhH--------------HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCH-
Q 013813 235 FPNLQDT--------------IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHM- 298 (436)
Q Consensus 235 g~~~~d~--------------~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~- 298 (436)
..+.++. ..++....+.|.+.++.. . ++ ++.+++.. ..+++..|||+.-
T Consensus 125 s~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~------------~--~e-i~~lr~~~~~~~i~V~gGI~~~g 189 (246)
T 2yyu_A 125 STDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS------------A--NE-AAFIKERCGASFLAVTPGIRFAD 189 (246)
T ss_dssp TCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC------------H--HH-HHHHHHHHCTTSEEEECCCCCCC
T ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC------------H--HH-HHHHHHhcCCCCEEEeCCcCCCC
Confidence 2111111 112222345666654321 1 34 66666654 3568999999842
Q ss_pred H---------HHHHHHHhcCcceeeeehHHhhCCc
Q 013813 299 E---------DVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 299 e---------da~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
. .+.++++. |+|.+.+||+++..++
T Consensus 190 ~~~~dq~rv~t~~~a~~a-Gad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 190 DAAHDQVRVVTPRKARAL-GSDYIVIGRSLTRAAD 223 (246)
T ss_dssp -------CCCCHHHHHHH-TCSEEEECHHHHTSSS
T ss_pred CCcccccccCCHHHHHHc-CCCEEEECHhhcCCCC
Confidence 0 35666665 9999999999998655
No 415
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=92.98 E-value=0.32 Score=45.75 Aligned_cols=126 Identities=20% Similarity=0.119 Sum_probs=73.5
Q ss_pred cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEec
Q 013813 180 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVH 259 (436)
Q Consensus 180 ~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VH 259 (436)
+.|+|+|-|+...- |-.+| .+.+.++... ..++-+.|- .|...+ . +.+...+.+.|-+-
T Consensus 83 ~~Ga~~VllghseR-----R~~~~--------e~~~k~~~A~-~~GL~~ivc--Vge~~e----~-~~~~~~~~~iIaye 141 (226)
T 1w0m_A 83 EAGGSGVILNHSEA-----PLKLN--------DLARLVAKAK-SLGLDVVVC--APDPRT----S-LAAAALGPHAVAVE 141 (226)
T ss_dssp HHTCCEEEECCTTS-----CCBHH--------HHHHHHHHHH-HTTCEEEEE--ESSHHH----H-HHHHHTCCSEEEEC
T ss_pred HcCCCEEEEeeeec-----cCCHH--------HHHHHHHHHH-HCCCEEEEE--eCCHHH----H-HHHhcCCCCEEEEc
Confidence 34899999885431 11111 2444444433 235554454 333222 1 33456677777776
Q ss_pred cCcccccCCCCCccCHHHHH----HHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 260 GRTRDEKDGKKFRADWNAIK----AVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 260 gRt~~~~~~~~g~ad~~~i~----~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
.|..-+....-..+.-+.+. .+++.. +++|++.|||++.++++.+... |+||+.||++++.-+++..
T Consensus 142 p~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~-giDG~LVG~a~l~a~~~~~ 213 (226)
T 1w0m_A 142 PPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRL-GTRGVLLASAAVKAKDPYA 213 (226)
T ss_dssp CGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHT-TCSEEEECHHHHTCSSHHH
T ss_pred ChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhC-CCCEEEECHHHHCCcCHHH
Confidence 66544221000022233222 233333 6899999999999999988775 9999999999998766544
No 416
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.95 E-value=0.81 Score=51.86 Aligned_cols=99 Identities=21% Similarity=0.281 Sum_probs=69.8
Q ss_pred HHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccC--CC--C----CccCHHHHHHHHhhCCC
Q 013813 217 VEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKD--GK--K----FRADWNAIKAVKNALRI 287 (436)
Q Consensus 217 v~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~--~~--~----g~ad~~~i~~ik~~~~i 287 (436)
++.+++.. +.|+.+=+-.+.+.++..+.++.++++|+|+|.||.-...... ++ . ...-++.++.+++.+++
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~ 704 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQI 704 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCC
Confidence 44555544 6788888766777888889999999999999999854322110 10 0 01235678888888889
Q ss_pred cEE--EccCCCCHHHHHHHHHhcCcceeee
Q 013813 288 PVL--ANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 288 PVi--anGGI~s~eda~~~l~~tGaDgVmI 315 (436)
||+ ...++.+..++.+.+.+.|+|+|.+
T Consensus 705 Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 705 PFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp CEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred ceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 988 4667777777666666679999988
No 417
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=92.83 E-value=0.85 Score=44.52 Aligned_cols=163 Identities=12% Similarity=0.154 Sum_probs=93.9
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC
Q 013813 158 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP 236 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~ 236 (436)
.|+ +=+...|.-. |+++ +.|||.|=+--. ...++. -|+-....-..+.+...++.|.+.+++||++-+-.|.
T Consensus 17 ~~i-~~~~a~D~~s----A~~~~~aG~~ai~vs~~-~~a~~~-~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy 89 (295)
T 1xg4_A 17 NPL-QIVGTINANH----ALLAQRAGYQAIYLSGG-GVAAGS-LGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF 89 (295)
T ss_dssp SSE-EEEECSSHHH----HHHHHHTTCSCEEECHH-HHHHTT-TCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS
T ss_pred CcE-EEecCcCHHH----HHHHHHcCCCEEEECch-Hhhhhh-cCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc
Confidence 444 4466667553 3344 358998866521 111111 1233333445677888888888888999999988774
Q ss_pred --ChhhHHHHHHHHHHcCccEEEeccCcccccCCCC----CccCHHHHHHHH---hhC-CCcEEEccCCCCH--------
Q 013813 237 --NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK----FRADWNAIKAVK---NAL-RIPVLANGNVRHM-------- 298 (436)
Q Consensus 237 --~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~----g~ad~~~i~~ik---~~~-~iPVianGGI~s~-------- 298 (436)
+.+++.+.++.+.++|+++|.+-+.....+.+.. .-..-+.+.+|+ +.. +.+++.+|.....
T Consensus 90 g~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~a 169 (295)
T 1xg4_A 90 GSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAA 169 (295)
T ss_dssp SSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHH
Confidence 5677888899999999999999766532221111 111223444444 332 4455566654432
Q ss_pred -HHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 299 -EDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 299 -eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++.+.+ .|||+|++= + +.++..++++.
T Consensus 170 i~ra~ay~e-AGAd~i~~e-~-~~~~~~~~~i~ 199 (295)
T 1xg4_A 170 IERAQAYVE-AGAEMLFPE-A-ITELAMYRQFA 199 (295)
T ss_dssp HHHHHHHHH-TTCSEEEET-T-CCSHHHHHHHH
T ss_pred HHHHHHHHH-cCCCEEEEe-C-CCCHHHHHHHH
Confidence 23334444 599999873 2 23444555444
No 418
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=92.81 E-value=0.61 Score=47.58 Aligned_cols=95 Identities=7% Similarity=0.038 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-
Q 013813 210 LPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR- 286 (436)
Q Consensus 210 p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~- 286 (436)
++.-.+.++++++++ ++.+.+-..-+++.++++++++.+++.++.+| ++.. .+-||+..+++++.++
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~i-------EqPl---~~~d~~~~~~l~~~~~~ 274 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWI-------EECL---PPQQYEGYRELKRNAPA 274 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEE-------ECCS---CTTCHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceE-------eCCC---CcchHHHHHHHHHhcCC
Confidence 344456667777665 46777776667888999999999999988776 2211 1347899999999887
Q ss_pred -CcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 287 -IPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 287 -iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+||.+.=.+.+..+++++++.. +|.|.+
T Consensus 275 ~ipIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 275 GMMVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp TCEEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred CCcEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 8988888899999999999985 998875
No 419
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=92.76 E-value=1.2 Score=41.52 Aligned_cols=137 Identities=12% Similarity=0.017 Sum_probs=76.0
Q ss_pred CCCEEEEecC-CCHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCA-NDPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g-~d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.++++=+-- -.|+....+++. .+.|+|.|.+|.- ++ .+.+...++.+++. +.-|++=..+
T Consensus 64 g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~-----------~G-----~~~l~~~~~~~~~~-g~~v~vLt~~ 126 (228)
T 3m47_A 64 GCRIIADFKVADIPETNEKICRATFKAGADAIIVHGF-----------PG-----ADSVRACLNVAEEM-GREVFLLTEM 126 (228)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEST-----------TC-----HHHHHHHHHHHHHH-TCEEEEECCC
T ss_pred CCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEecc-----------CC-----HHHHHHHHHHHHhc-CCCeEEEEeC
Confidence 3456644433 345666666654 4569999999942 21 23445555554432 3335543233
Q ss_pred CC-C----h-hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC--CcEEEccCCCCH-HHHHHHH
Q 013813 235 FP-N----L-QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR--IPVLANGNVRHM-EDVQKCL 305 (436)
Q Consensus 235 g~-~----~-~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~--iPVianGGI~s~-eda~~~l 305 (436)
.. + . +-...+++...+.|++++.+.+ +. -+.++.+++..+ .++ ..+||..- .+. +++
T Consensus 127 s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a-t~-----------~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~ 192 (228)
T 3m47_A 127 SHPGAEMFIQGAADEIARMGVDLGVKNYVGPS-TR-----------PERLSRLREIIGQDSFL-ISPGVGAQGGDP-GET 192 (228)
T ss_dssp CSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS-SC-----------HHHHHHHHHHHCSSSEE-EECC----------CG
T ss_pred CCccHHHHHHHHHHHHHHHHHHhCCcEEEECC-CC-----------hHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHH
Confidence 21 1 1 1234678888899999986643 21 134667777654 444 77777632 245 666
Q ss_pred HhcCcceeeeehHHhhCCcc
Q 013813 306 EETGCEGVLSAESLLENPAL 325 (436)
Q Consensus 306 ~~tGaDgVmIGRgal~nP~l 325 (436)
+. |+|.+.+||+++..++.
T Consensus 193 ~a-Gad~iVvGr~I~~a~dp 211 (228)
T 3m47_A 193 LR-FADAIIVGRSIYLADNP 211 (228)
T ss_dssp GG-TCSEEEECHHHHTSSCH
T ss_pred Hc-CCCEEEECHHHhCCCCH
Confidence 54 99999999999875543
No 420
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=92.69 E-value=0.28 Score=50.30 Aligned_cols=72 Identities=11% Similarity=0.180 Sum_probs=56.8
Q ss_pred cCCChhhHHHHHHHHHH-cCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEcc-CCCCHHHHHHHHHhcC
Q 013813 234 VFPNLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANG-NVRHMEDVQKCLEETG 309 (436)
Q Consensus 234 lg~~~~d~~~~ak~le~-aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianG-GI~s~eda~~~l~~tG 309 (436)
.+++.++++++++.+++ .++.+| ++.. .+-||+..+++++.+ ++||.+.= -+.+.+++.++++...
T Consensus 265 ~~~t~~~ai~~~~~L~~~~~i~~i-------EePl---~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a 334 (431)
T 2fym_A 265 KAFTSEEFTHFLEELTKQYPIVSI-------EDGL---DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGI 334 (431)
T ss_dssp EEECHHHHHHHHHHHHHHSCEEEE-------ESCS---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCceEE-------ECCC---CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCC
Confidence 34677888999999987 776554 2111 135799999999988 89998777 7899999999999878
Q ss_pred cceeee
Q 013813 310 CEGVLS 315 (436)
Q Consensus 310 aDgVmI 315 (436)
+|.|++
T Consensus 335 ~d~i~i 340 (431)
T 2fym_A 335 ANSILI 340 (431)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999887
No 421
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.66 E-value=2.2 Score=41.52 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=70.4
Q ss_pred ChHHHHHHHHHHhcccCccEEEEec-cC-C-C--------hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHH
Q 013813 209 NLPLVKSLVEKLALNLNVPVSCKIR-VF-P-N--------LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNA 277 (436)
Q Consensus 209 ~p~~v~eIv~av~~~~~iPVsVKiR-lg-~-~--------~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~ 277 (436)
|-+..+++++... ..++.|-.=+- +| . + ..++.+..+.+++.|+|.|.+.-.|..+.|......|++.
T Consensus 119 Ni~~Tk~vv~~ah-~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~ 197 (288)
T 3q94_A 119 NVETTKKVVEYAH-ARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAE 197 (288)
T ss_dssp HHHHHHHHHHHHH-TTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHH
T ss_pred HHHHHHHHHHHHH-HcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHH
Confidence 4455666766654 33555555432 11 1 0 2244555556678999999774444333332233579999
Q ss_pred HHHHHhhCCCcEEEccCCCC-HHHHHHHHHhcCcceeeeehHH
Q 013813 278 IKAVKNALRIPVLANGNVRH-MEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 278 i~~ik~~~~iPVianGGI~s-~eda~~~l~~tGaDgVmIGRga 319 (436)
+++|++.+++|++.-||=.. .++++++++. |+--|=|++.+
T Consensus 198 L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~-Gv~KiNi~Tdl 239 (288)
T 3q94_A 198 MEQVRDFTGVPLVLHGGTGIPTADIEKAISL-GTSKINVNTEN 239 (288)
T ss_dssp HHHHHHHHCSCEEECCCTTCCHHHHHHHHHT-TEEEEEECHHH
T ss_pred HHHHHHhcCCCEEEeCCCCCCHHHHHHHHHc-CCeEEEEChHH
Confidence 99999999999998886444 4667888875 88888777655
No 422
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=92.59 E-value=0.61 Score=47.41 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=73.2
Q ss_pred HHHHHHHHhccc--CccEEEEecc------CCChhhHHHHHHHHHHcCccE-EEeccCcccccCCC-CCccCHHHHHHHH
Q 013813 213 VKSLVEKLALNL--NVPVSCKIRV------FPNLQDTIKYAKMLEDAGCSL-LAVHGRTRDEKDGK-KFRADWNAIKAVK 282 (436)
Q Consensus 213 v~eIv~av~~~~--~iPVsVKiRl------g~~~~d~~~~ak~le~aG~d~-I~VHgRt~~~~~~~-~g~ad~~~i~~ik 282 (436)
..+.++++++.+ ++.+.+-..- +++.++++++++.+++.|+.. +-| ++.... ..+-||+..++++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~i-----EqP~~~~~~~~d~~~~~~l~ 292 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYI-----EGPVDAGNKPDQIRMLTAIT 292 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEE-----ECCCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEE-----ECCcCCCCCcccHHHHHHHH
Confidence 347888998887 3666666666 688889999999999977541 111 211100 0034788899999
Q ss_pred hh-----CCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 283 NA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 283 ~~-----~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+. .++||.+.=.+.+.+++.++++...+|.|.+=
T Consensus 293 ~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik 331 (413)
T 1kko_A 293 KELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIK 331 (413)
T ss_dssp HHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeC
Confidence 88 88999998899999999999998789988863
No 423
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=92.58 E-value=0.53 Score=47.69 Aligned_cols=90 Identities=17% Similarity=0.316 Sum_probs=59.5
Q ss_pred CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcc----------------------c--------cc----CCC-
Q 013813 225 NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTR----------------------D--------EK----DGK- 269 (436)
Q Consensus 225 ~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~----------------------~--------~~----~~~- 269 (436)
+.|+.+-+=...+.+...++++.++++|++.|.|.--+. . +. ...
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 457777753334556667788888888888876621000 0 00 000
Q ss_pred ----------CCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 270 ----------KFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 270 ----------~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
.....|+.|+.+++.+++||+.- ||.+.++++.+.+. |+|+|.++
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~~a-Gad~I~vs 280 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAK-GILRGDDAREAVKH-GLNGILVS 280 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEE-EECCHHHHHHHHHT-TCCEEEEC
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEE-ecCCHHHHHHHHHc-CCCEEEeC
Confidence 11247999999999999999886 46889999998876 99999983
No 424
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.48 E-value=0.82 Score=42.71 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=70.0
Q ss_pred HHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc
Q 013813 213 VKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 292 (436)
Q Consensus 213 v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian 292 (436)
..++++.+.+. ++..=+|. .+.++..++++.+.+.|++.|.+.-++. ...+.++++++...--+++.
T Consensus 16 ~~~~~~~l~~~---~ii~V~r~-~~~~~~~~~~~al~~gGv~~iel~~k~~---------~~~~~i~~l~~~~~~~~iga 82 (225)
T 1mxs_A 16 AARIDAICEKA---RILPVITI-AREEDILPLADALAAGGIRTLEVTLRSQ---------HGLKAIQVLREQRPELCVGA 82 (225)
T ss_dssp HHHHHHHHHHH---SEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEESSST---------HHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHC---CEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEecCCc---------cHHHHHHHHHHhCcccEEee
Confidence 44555555433 55555554 4667889999999999999998864432 23467887887764446777
Q ss_pred cCCCCHHHHHHHHHhcCcceeeeehHHhhCCccch
Q 013813 293 GNVRHMEDVQKCLEETGCEGVLSAESLLENPALFA 327 (436)
Q Consensus 293 GGI~s~eda~~~l~~tGaDgVmIGRgal~nP~lf~ 327 (436)
|-+.+.++++.+++. |||+|.+|. .|+.+..
T Consensus 83 gtvl~~d~~~~A~~a-GAd~v~~p~---~d~~v~~ 113 (225)
T 1mxs_A 83 GTVLDRSMFAAVEAA-GAQFVVTPG---ITEDILE 113 (225)
T ss_dssp ECCCSHHHHHHHHHH-TCSSEECSS---CCHHHHH
T ss_pred CeEeeHHHHHHHHHC-CCCEEEeCC---CCHHHHH
Confidence 889999999999987 999999883 3554443
No 425
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.37 E-value=0.51 Score=46.21 Aligned_cols=53 Identities=21% Similarity=0.219 Sum_probs=34.9
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHh---cccCccEEEEe
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLA---LNLNVPVSCKI 232 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~---~~~~iPVsVKi 232 (436)
+.+...+-| +.+++|+|.||||+|.+ .....+.+.+++..+. +.+++||+|-.
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT 91 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEIARVPVMIDS 91 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeC
Confidence 445555555 56788999999997532 2233455666666554 45689999984
No 426
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=92.26 E-value=0.72 Score=43.93 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=60.0
Q ss_pred HHHHHHHHhcc---cCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCc-------------c---
Q 013813 213 VKSLVEKLALN---LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFR-------------A--- 273 (436)
Q Consensus 213 v~eIv~av~~~---~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~-------------a--- 273 (436)
+.+.++.+++. .-+|+.. -..++.+++.++++.++++|+|.|.+-.-..++.. .|+ .
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~--~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~a--dgp~i~~a~~~al~~G~~~~ 79 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLM--VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVA--DGPTIQVAHEVALKNGIRFE 79 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEE--TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTT--SCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHhcCCceEEEEec--CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCccc--ccHHHHHHHHHHHHcCCCHH
Confidence 44555555432 2234433 23456788999999999999999988432222111 011 1
Q ss_pred -CHHHHHHHHhhC-CCcEEEccCCCC------HHHHHHHHHhcCcceeeee
Q 013813 274 -DWNAIKAVKNAL-RIPVLANGNVRH------MEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 274 -d~~~i~~ik~~~-~iPVianGGI~s------~eda~~~l~~tGaDgVmIG 316 (436)
-++.++++++.+ ++||++-|-.+. ...++.+.+ .|+|||.+.
T Consensus 80 ~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~-aG~dgvii~ 129 (262)
T 2ekc_A 80 DVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSRE-KGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHH-TTCCEEECT
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHH-cCCCEEEEC
Confidence 135688888888 999998643321 233444444 599999985
No 427
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.23 E-value=0.24 Score=49.51 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=54.7
Q ss_pred cEEEEeccCCChhhHHHHHHHHHHc--CccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHH
Q 013813 227 PVSCKIRVFPNLQDTIKYAKMLEDA--GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQK 303 (436)
Q Consensus 227 PVsVKiRlg~~~~d~~~~ak~le~a--G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~ 303 (436)
++.+.+ +...++ .+.++.+.+. |++.|.+|.... . ...-|+.++.+++.. ++||++ |+|.|.++++.
T Consensus 108 ~v~~~~--g~~~~~-~~~~~~l~~~~~g~~~i~i~~~~g-----~-~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~ 177 (351)
T 2c6q_A 108 HLAASS--GTGSSD-FEQLEQILEAIPQVKYICLDVANG-----Y-SEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEE 177 (351)
T ss_dssp TEEEEE--CSSHHH-HHHHHHHHHHCTTCCEEEEECSCT-----T-BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHH
T ss_pred eeEeec--CCChHH-HHHHHHHHhccCCCCEEEEEecCC-----C-cHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHH
Confidence 344443 433333 3445555555 999998874321 1 122478899999988 899884 77899999999
Q ss_pred HHHhcCcceeeee
Q 013813 304 CLEETGCEGVLSA 316 (436)
Q Consensus 304 ~l~~tGaDgVmIG 316 (436)
+.+. |+|+|.++
T Consensus 178 a~~a-GaD~I~v~ 189 (351)
T 2c6q_A 178 LILS-GADIIKVG 189 (351)
T ss_dssp HHHT-TCSEEEEC
T ss_pred HHHh-CCCEEEEC
Confidence 9886 99999886
No 428
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=92.14 E-value=0.45 Score=46.88 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=60.5
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCccccc---ccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAF---LMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIK 243 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~---Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~ 243 (436)
+++...+-| +.+++|+|.||||.-+-.+ |+. .....+.+..+|+++++..++||+|-..- .+
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~-------~~ 96 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWK-------SQ 96 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSC-------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCC-------HH
Confidence 344444444 5678899999999633111 221 12445677788888888789999998321 24
Q ss_pred HHHHHHHcCccEE-EeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc
Q 013813 244 YAKMLEDAGCSLL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN 292 (436)
Q Consensus 244 ~ak~le~aG~d~I-~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian 292 (436)
.++.+.++|++.| .|.|-..+ + +++ .+....++||++-
T Consensus 97 Va~aAl~aGa~iINDVsg~~~d-------~---~m~-~v~a~~~~~vvlm 135 (314)
T 2vef_A 97 VAEAALAAGADLVNDITGLMGD-------E---KMP-HVVAEARAQVVIM 135 (314)
T ss_dssp HHHHHHHTTCCEEEETTTTCSC-------T---THH-HHHHHHTCEEEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCC-------h---HHH-HHHHHcCCCEEEE
Confidence 5677777899988 35543321 1 223 3334457888763
No 429
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.13 E-value=4.8 Score=38.63 Aligned_cols=143 Identities=8% Similarity=0.065 Sum_probs=84.8
Q ss_pred EEecCCCHHHHHHHHHHHcCCCcEEEEecC-CCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC-----
Q 013813 162 VQFCANDPEILLNAARRVEPYCDYVDINLG-CPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF----- 235 (436)
Q Consensus 162 vQL~g~d~e~~~~AA~~v~~g~D~IdLN~G-CP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg----- 235 (436)
++.+..+.+.+.+| ++.|++.|.+-.+ ++.-... ..+-...++.+.+.++++.+++. ++.|..-+...
T Consensus 75 v~~l~~n~~~i~~a---~~~G~~~V~i~~~~S~~h~~~--~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~ 148 (295)
T 1ydn_A 75 YSVLVPNMKGYEAA---AAAHADEIAVFISASEGFSKA--NINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPY 148 (295)
T ss_dssp EEEECSSHHHHHHH---HHTTCSEEEEEEESCHHHHHH--HTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETT
T ss_pred EEEEeCCHHHHHHH---HHCCCCEEEEEEecCHHHHHH--HcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCc
Confidence 33444555554443 4568998888652 3222111 12223344556666777766544 66665433321
Q ss_pred ---CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCC-CcEEEcc----CCCCHHHHHHHHHh
Q 013813 236 ---PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALR-IPVLANG----NVRHMEDVQKCLEE 307 (436)
Q Consensus 236 ---~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~-iPVianG----GI~s~eda~~~l~~ 307 (436)
.+.+...++++.+.+.|++.|.+-.-... .......+.++.+++.++ +|+..-| |+. ...+..+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~----~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla-~an~l~Ai~a 223 (295)
T 1ydn_A 149 DGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR----GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRA-LDNIRVSLEK 223 (295)
T ss_dssp TEECCHHHHHHHHHHHHHHTCSEEEEEETTSC----CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCH-HHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC----cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchH-HHHHHHHHHh
Confidence 35678889999999999999988521110 111234677888988886 8887655 433 3445666775
Q ss_pred cCcceeeee
Q 013813 308 TGCEGVLSA 316 (436)
Q Consensus 308 tGaDgVmIG 316 (436)
|++.|-+.
T Consensus 224 -G~~~vd~s 231 (295)
T 1ydn_A 224 -GLRVFDAS 231 (295)
T ss_dssp -TCCEEEEB
T ss_pred -CCCEEEec
Confidence 99987765
No 430
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=92.09 E-value=0.37 Score=47.21 Aligned_cols=121 Identities=12% Similarity=0.105 Sum_probs=81.1
Q ss_pred EecCCCHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhh
Q 013813 163 QFCANDPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQD 240 (436)
Q Consensus 163 QL~g~d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d 240 (436)
.+.+.+++.+.+.++ .++.|+..+-+..|. ..+ .+.++++++.+ ++.+.+-..-+++.++
T Consensus 127 ~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~--------------~~d----~~~v~avr~~~~~~~l~vDaN~~~~~~~ 188 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLWQAGAKLLKVKLDN--------------HLI----SERMVAIRTAVPDATLIVDANESWRAEG 188 (324)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS--------------SCH----HHHHHHHHHHCTTSEEEEECTTCCCSTT
T ss_pred EeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC--------------chH----HHHHHHHHHhCCCCEEEEECcCCCCHHH
Confidence 355668888877664 567899999987651 112 33456666654 4566666666788889
Q ss_pred HHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 241 TIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 241 ~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
+.++++.+++.++.+|- +... +-|++..++++ .++||.+.=.+.+..++.++++. +|.|.+
T Consensus 189 a~~~~~~l~~~~i~~iE-------qP~~---~~d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~~--~~~i~i 249 (324)
T 1jpd_X 189 LAARCQLLADLGVAMLE-------QPLP---AQDDAALENFI--HPLPICADESCHTRSNLKALKGR--YEMVNI 249 (324)
T ss_dssp HHHHHHHHHHTTCCEEE-------CCSC---TTSCGGGGSSC--CSSCEEESTTCSSGGGHHHHBTT--BSEEEE
T ss_pred HHHHHHHHHhCCCCEEE-------CCCC---CCCHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHhh--CCEEEE
Confidence 99999999999988762 1100 12333333332 57999998889999999988753 665554
No 431
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.07 E-value=0.6 Score=44.55 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=61.6
Q ss_pred HHHHHHHHhccc---CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCC-----------cc----C
Q 013813 213 VKSLVEKLALNL---NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF-----------RA----D 274 (436)
Q Consensus 213 v~eIv~av~~~~---~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g-----------~a----d 274 (436)
+.+.++.+++.- -+|... -..++.++..++++.++++|+|.|.+-.-..++...++. .. -
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~--~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~ 81 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFVT--LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQC 81 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHhcCCceEEEEee--CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHH
Confidence 445555554322 233332 123556888999999999999999984322222111000 01 1
Q ss_pred HHHHHHHHhh-CCCcEEEccCCC-----C-HHHHHHHHHhcCcceeeeehHHh
Q 013813 275 WNAIKAVKNA-LRIPVLANGNVR-----H-MEDVQKCLEETGCEGVLSAESLL 320 (436)
Q Consensus 275 ~~~i~~ik~~-~~iPVianGGI~-----s-~eda~~~l~~tGaDgVmIGRgal 320 (436)
.+.++++++. +++||++-+-.+ . .+.++.+.+ .|+|+|.+.-..+
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~-aGadgii~~d~~~ 133 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQ-VGVDSVLVADVPV 133 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHH-HTCCEEEETTCCG
T ss_pred HHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHH-cCCCEEEEcCCCH
Confidence 3668899988 899998743221 1 344555555 5999999864433
No 432
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=92.05 E-value=3.9 Score=39.06 Aligned_cols=138 Identities=14% Similarity=0.239 Sum_probs=80.8
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cC--ccEEE
Q 013813 157 DRPLFVQFCAND-PEILLNAARRVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LN--VPVSC 230 (436)
Q Consensus 157 e~plivQL~g~d-~e~~~~AA~~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~--iPVsV 230 (436)
+.++++=+=-.| |+..+.+++.+.. |+|.|.+|. +|+ .+.+...++.+.+. .+ .|..+
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~-----------~~G-----~~~~~aa~~~~~~~~~~g~~~~~li 119 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHA-----------LGG-----SQMIKSAKDGLIAGTPAGHSVPKLL 119 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEG-----------GGC-----HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcC-----------CCC-----HHHHHHHHHHHHHhcccCCCCceEE
Confidence 567777776666 5566666666654 899999994 222 23344455544321 11 22222
Q ss_pred Ee-cc-CCC-------------h-hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEcc
Q 013813 231 KI-RV-FPN-------------L-QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANG 293 (436)
Q Consensus 231 Ki-Rl-g~~-------------~-~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianG 293 (436)
-+ -+ ..+ . +....+|+...++|+++++..+ - + ++.+++.. +-.++..+
T Consensus 120 ~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~------------~--e-~~~ir~~~~~~f~~vtP 184 (259)
T 3tfx_A 120 AVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSP------------L--E-VKKLHENIGDDFLYVTP 184 (259)
T ss_dssp EECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCG------------G--G-HHHHHHHHCSSSEEEEC
T ss_pred EEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECH------------H--H-HHHHHhhcCCccEEEcC
Confidence 11 11 111 1 2345678888899999987631 1 1 34555544 33466778
Q ss_pred CCCCHH----H------HHHHHHhcCcceeeeehHHhhCCccc
Q 013813 294 NVRHME----D------VQKCLEETGCEGVLSAESLLENPALF 326 (436)
Q Consensus 294 GI~s~e----d------a~~~l~~tGaDgVmIGRgal~nP~lf 326 (436)
||+-.. | ..++++. |+|.+++||+++..++-.
T Consensus 185 GIr~~g~~~gDQ~Rv~T~~~a~~a-Gad~iVvGr~I~~a~dp~ 226 (259)
T 3tfx_A 185 GIRPAGNAKDDQSRVATPKMAKEW-GSSAIVVGRPITLASDPK 226 (259)
T ss_dssp CCCCC-----------CHHHHHHT-TCSEEEECHHHHTSSSHH
T ss_pred CcCCCCCCcCCccccCCHHHHHHc-CCCEEEEChHHhCCCCHH
Confidence 886421 1 5566765 999999999998866543
No 433
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=92.03 E-value=0.79 Score=47.03 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=69.8
Q ss_pred CChHHHHHHHHHHhcc---c--CccEEEEec--------------cCCChhhHHHHHHH-HHHcCccEEEeccCcccccC
Q 013813 208 DNLPLVKSLVEKLALN---L--NVPVSCKIR--------------VFPNLQDTIKYAKM-LEDAGCSLLAVHGRTRDEKD 267 (436)
Q Consensus 208 ~~p~~v~eIv~av~~~---~--~iPVsVKiR--------------lg~~~~d~~~~ak~-le~aG~d~I~VHgRt~~~~~ 267 (436)
.+.+.+.-++++|+++ + ++.+.+-.- -+++.++++++++. +++.++.+|- ++.
T Consensus 216 ~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE------dPl- 288 (428)
T 3tqp_A 216 NNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE------DGL- 288 (428)
T ss_dssp SHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE------CCS-
T ss_pred cHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe------CCC-
Confidence 3455566678899888 6 455555541 24677888999987 8888866551 111
Q ss_pred CCCCccCHHHHHHHHhhCCCcEEEccC---CCCHHHHHHHHHhcCcceeeee
Q 013813 268 GKKFRADWNAIKAVKNALRIPVLANGN---VRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 268 ~~~g~ad~~~i~~ik~~~~iPVianGG---I~s~eda~~~l~~tGaDgVmIG 316 (436)
.+-||+..+++++.++.||-..|+ +.++++++++++...||.|.+=
T Consensus 289 ---~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 289 ---SENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp ---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred ---CcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 135899999999988766644454 4599999999998778888653
No 434
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.01 E-value=1.2 Score=43.46 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=44.4
Q ss_pred HHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccC---ChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHH
Q 013813 169 PEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMD---NLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 169 ~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~---~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ 244 (436)
++...+.| +.+++|+|.||||.-+--+ |+.-.. ..+.+..+++++++.+++||+|-.. + .+.
T Consensus 62 ~~~a~~~a~~~v~~GAdiIDIGgeStrP-------ga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~---~----~~V 127 (297)
T 1tx2_A 62 VDAAVRHAKEMRDEGAHIIDIGGESTRP-------GFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTY---K----AEV 127 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCC-----------CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECS---C----HHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCC---C----HHH
Confidence 34444444 5668899999999644111 222222 2334555668888777999999842 1 234
Q ss_pred HHHHHHcCccEE
Q 013813 245 AKMLEDAGCSLL 256 (436)
Q Consensus 245 ak~le~aG~d~I 256 (436)
++.+.++|++.|
T Consensus 128 ~~aAl~aGa~iI 139 (297)
T 1tx2_A 128 AKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHTCCEE
T ss_pred HHHHHHcCCCEE
Confidence 555556688877
No 435
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=91.84 E-value=1.1 Score=43.48 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=59.7
Q ss_pred cCccEEEEeccCCChhhHHHHHHHHHHcCcc---EEEeccCcccccC--CCCCc--cCHHHHHHHHhhCCCcEEE--ccC
Q 013813 224 LNVPVSCKIRVFPNLQDTIKYAKMLEDAGCS---LLAVHGRTRDEKD--GKKFR--ADWNAIKAVKNALRIPVLA--NGN 294 (436)
Q Consensus 224 ~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d---~I~VHgRt~~~~~--~~~g~--ad~~~i~~ik~~~~iPVia--nGG 294 (436)
.+.|+.+-+. +.+.++..+.++.++++|+| +|.+|.-...... .+.+. .-++.++.+++.+++||+. .++
T Consensus 92 ~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 92 SKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred CCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4789988875 56778888999999999999 8999753221100 01001 1246778888887889874 455
Q ss_pred CCCHHHH---HHHHHhcC-cceeeee
Q 013813 295 VRHMEDV---QKCLEETG-CEGVLSA 316 (436)
Q Consensus 295 I~s~eda---~~~l~~tG-aDgVmIG 316 (436)
+ +.+++ .+.+.+.| +|+|.+.
T Consensus 171 ~-~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 F-DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp C-CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred C-CHHHHHHHHHHHHhcCCceEEEEe
Confidence 4 55664 33345569 9998653
No 436
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=91.66 E-value=0.5 Score=45.92 Aligned_cols=80 Identities=25% Similarity=0.323 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHcCccEEEeccCcc-ccc--CCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 240 DTIKYAKMLEDAGCSLLAVHGRTR-DEK--DGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 240 d~~~~ak~le~aG~d~I~VHgRt~-~~~--~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+..++++.++++|++.|.+..... ... .+.....+.+.++++++.+++||+++-.+...++++.+++ .|||+|. +
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a-~GAd~V~-~ 106 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEA-MGVDYID-E 106 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHHH-HTCSEEE-E
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHHH-CCCCEEE-E
Confidence 445789999999999995432100 000 1100123678899999999999996443434777777776 5999996 6
Q ss_pred hHHhh
Q 013813 317 ESLLE 321 (436)
Q Consensus 317 Rgal~ 321 (436)
...+.
T Consensus 107 ~~~l~ 111 (305)
T 2nv1_A 107 SEVLT 111 (305)
T ss_dssp CTTSC
T ss_pred eccCC
Confidence 66653
No 437
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=91.61 E-value=0.53 Score=48.72 Aligned_cols=118 Identities=14% Similarity=0.040 Sum_probs=85.7
Q ss_pred HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHHHHHHHHcCccEE
Q 013813 179 VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLL 256 (436)
Q Consensus 179 v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I 256 (436)
.+.||..+-+.+|.... .|. .+++.-.+.|+++++.+ ++.+.|-..-+++..+++++++.+++.++.+|
T Consensus 177 ~~~Gf~~~KlKv~~~~~------~G~---~~~~~di~rv~avRea~G~d~~L~vDaN~~wt~~~Ai~~~~~Le~~~l~~i 247 (455)
T 3fxg_A 177 KAMGFWGGKVPLPFCPD------DGH---EGLRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKACLDLNINWW 247 (455)
T ss_dssp HHHTCSCEEEECCCCGG------GHH---HHHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHTGGGCCSEE
T ss_pred HHcCCCEEEEcCCCCcc------ccc---ccHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHhcccCCccee
Confidence 34588888887642110 011 12445566777888877 57888888888999999999999999998776
Q ss_pred EeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 257 AVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 257 ~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++... +-|++..+++++.+ .+||.+.=.+.+..++.++++...+|.|++
T Consensus 248 -------EEPl~---~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~ 297 (455)
T 3fxg_A 248 -------EECLS---PDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp -------ECCSC---GGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECC
T ss_pred -------cCCCC---cchHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEE
Confidence 22111 34677788888876 478888778999999999998777888764
No 438
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=91.53 E-value=0.54 Score=45.67 Aligned_cols=94 Identities=10% Similarity=0.095 Sum_probs=59.8
Q ss_pred HHHHHHHhcccC-ccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHh-hCCCcEEE
Q 013813 214 KSLVEKLALNLN-VPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKN-ALRIPVLA 291 (436)
Q Consensus 214 ~eIv~av~~~~~-iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~-~~~iPVia 291 (436)
.+.++.+++... .++.|-+. +. +-++.+.++|+|.|.+|.-+.++ --+.++.++. ..+++|.+
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~---t~----eea~eal~aGaD~I~LDn~~~~~--------~~~~v~~l~~~~~~v~iea 246 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD---SL----EQLDAVLPEKPELILLDNFAVWQ--------TQTAVQRRDSRAPTVMLES 246 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES---SH----HHHHHHGGGCCSEEEEETCCHHH--------HHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC---CH----HHHHHHHHcCCCEEEECCCCHHH--------HHHHHHHhhccCCCeEEEE
Confidence 345555555442 25555543 22 33555667999999998743221 0133444444 23689999
Q ss_pred ccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 292 NGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 292 nGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
+|||+ ++.+.++.+ +|+|++.+|.....-|+
T Consensus 247 SGGIt-~~~i~~~a~-tGVD~isvG~l~~~a~~ 277 (284)
T 1qpo_A 247 SGGLS-LQTAATYAE-TGVDYLAVGALTHSVRV 277 (284)
T ss_dssp ESSCC-TTTHHHHHH-TTCSEEECGGGTSSBCC
T ss_pred ECCCC-HHHHHHHHh-cCCCEEEECHHHcCCCC
Confidence 99995 788888776 59999999986555554
No 439
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.35 E-value=0.55 Score=49.20 Aligned_cols=71 Identities=17% Similarity=0.258 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHHHhcCcceeeeeh
Q 013813 239 QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCLEETGCEGVLSAE 317 (436)
Q Consensus 239 ~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l~~tGaDgVmIGR 317 (436)
.+..+.++.+.++|++.|.|..-... . ..-++.++++++.. ++||+ .|+|.+.++++.+.+. |+|+|.+|-
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~----~--~~v~~~i~~i~~~~~~~~vi-~g~v~t~e~a~~~~~a-Gad~i~vg~ 326 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGH----S--QGVIDKVKEVRAKYPSLNII-AGNVATAEATKALIEA-GANVVKVGI 326 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTT----S--HHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHHHH-TCSEEEECS
T ss_pred cchHHHHHHHHhhccceEEecccccc----h--hhhhhHHHHHHHhCCCceEE-eeeeccHHHHHHHHHh-CCCEEEECC
Confidence 34566788889999999999644211 1 22357889998876 47777 4789999999998886 999998853
No 440
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=91.30 E-value=1.4 Score=42.46 Aligned_cols=128 Identities=13% Similarity=-0.003 Sum_probs=82.5
Q ss_pred CHHHHHHHHH-HHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAAR-RVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA~-~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
|.+.+.+-++ .++. +|+|=++. ..|-+..-..+.-.++++.+.+ .+||.+.+- +.+..+++++++
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg-~~~t~~ai~la~ 82 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLVYG----------SNGEGVHLTPEERARGLRALRP--RKPFLVGLM-EETLPQAEGALL 82 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEETC----------TTTTGGGSCHHHHHHHHHTCCC--SSCCEEEEC-CSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh-CCEEEECC----------cCcCchhcCHHHHHHHHHHHHh--CCcEEEeCC-CCCHHHHHHHHH
Confidence 5666777675 4566 88887773 3454545566777788888776 789998843 245688999999
Q ss_pred HHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEE-Ec-----cCCCCHHHHHHHHHhcCccee
Q 013813 247 MLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVL-AN-----GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 247 ~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVi-an-----GGI~s~eda~~~l~~tGaDgV 313 (436)
.++++|+|++.+..-........ ..-+++.+.|.+ ++||+ +| |---+++.+.++.+..++-||
T Consensus 83 ~A~~~Gadavlv~~P~y~~~~~~--~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 151 (283)
T 2pcq_A 83 EAKAAGAMALLATPPRYYHGSLG--AGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALAPHPNVLGI 151 (283)
T ss_dssp HHHHHTCSEEEECCCCTTGGGTT--THHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHTTSTTEEEE
T ss_pred HHHhcCCCEEEecCCcCCCCCCH--HHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHhcCCCEEEE
Confidence 99999999997753221100011 112456677777 78875 45 434578888777643334343
No 441
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=91.11 E-value=0.38 Score=44.79 Aligned_cols=137 Identities=9% Similarity=-0.010 Sum_probs=85.6
Q ss_pred CCCEEEEecCCC-HHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccC
Q 013813 157 DRPLFVQFCAND-PEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVF 235 (436)
Q Consensus 157 e~plivQL~g~d-~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg 235 (436)
+.++++=+=-+| |+..+.+++.+...+|.|.+|..... ...++ .. +. +.-|++=..+.
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~ad~vTvh~~~G~---------~~~~~------~~-~~-----~~~v~vLts~s 108 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDITNSFIAHAFVGV---------EGSLA------SL-SQ-----RVDLFLVLSMS 108 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTTCSEEEEEGGGCT---------TTTHH------HH-HH-----HSEEEEECCCS
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHhhheEEEeCCCCc---------HHHHH------hH-hc-----CCCEEEEEecC
Confidence 677887776666 55566666666444999999952210 11111 11 11 11244443432
Q ss_pred C---ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCH-HHHHHHHHhcCcc
Q 013813 236 P---NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHM-EDVQKCLEETGCE 311 (436)
Q Consensus 236 ~---~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~-eda~~~l~~tGaD 311 (436)
. ..+-...+++...++|++++++.+. ..+.++.+++..+-.++..|||+.- .+..++++. |+|
T Consensus 109 ~~~~~~~~v~~~a~~a~~~G~~GvV~sat------------~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~~~-Gad 175 (215)
T 3ve9_A 109 HPGWNDAFYPYLREVARRVNPKGFVAPAT------------RPSMISRVKGDFPDKLVISPGVGTQGAKPGIALCH-GAD 175 (215)
T ss_dssp STTCCGGGHHHHHHHHHHHCCSEEECCTT------------SHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHHHT-TCS
T ss_pred CcchHHHHHHHHHHHHHHcCCCceeeCCC------------CHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHHHc-CCC
Confidence 1 1234677899999999998876322 1345677887663367888999842 156667765 999
Q ss_pred eeeeehHHhhCCccch
Q 013813 312 GVLSAESLLENPALFA 327 (436)
Q Consensus 312 gVmIGRgal~nP~lf~ 327 (436)
.+.+||+++..++-..
T Consensus 176 ~iVvGr~I~~a~dp~~ 191 (215)
T 3ve9_A 176 YEIVGRSVYQSADPVR 191 (215)
T ss_dssp EEEECHHHHTSSSHHH
T ss_pred EEEeCHHHcCCCCHHH
Confidence 9999999998665443
No 442
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=91.09 E-value=1.5 Score=41.91 Aligned_cols=132 Identities=18% Similarity=0.173 Sum_probs=84.1
Q ss_pred EEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc-CC----
Q 013813 162 VQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV-FP---- 236 (436)
Q Consensus 162 vQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl-g~---- 236 (436)
+-+|..+.++...| .+.|+|-|||+.+-.. | .|--....+ +.+++.+++||.|=||. +.
T Consensus 4 lEvc~~s~~~a~~A---~~~GAdRIELc~~L~~-----G----GlTPS~g~i----~~~~~~~~ipv~vMIRPR~GdF~Y 67 (256)
T 1twd_A 4 LEICCYSMECALTA---QQNGADRVELCAAPKE-----G----GLTPSLGVL----KSVRQRVTIPVHPIIRPRGGDFCY 67 (256)
T ss_dssp EEEEESSHHHHHHH---HHTTCSEEEECBCGGG-----T----CBCCCHHHH----HHHHHHCCSCEEEBCCSSSSCSCC
T ss_pred EEEEeCCHHHHHHH---HHcCCCEEEEcCCccc-----C----CCCCCHHHH----HHHHHHcCCceEEEECCCCCCCcC
Confidence 45666666654433 4568999999853211 1 132333444 34455668999999987 21
Q ss_pred ChhhH---HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccC---CCCHHHHHHHHHhcC
Q 013813 237 NLQDT---IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGN---VRHMEDVQKCLEETG 309 (436)
Q Consensus 237 ~~~d~---~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGG---I~s~eda~~~l~~tG 309 (436)
+..+. .+=++.+.++|+++|.+-.=+.+ |..|.+.++++.+.. +++|..-=- +.++..+.+.|...|
T Consensus 68 s~~E~~~M~~Di~~~~~~GadGvV~G~Lt~d------g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG 141 (256)
T 1twd_A 68 SDGEFAAILEDVRTVRELGFPGLVTGVLDVD------GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELG 141 (256)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEECCBCTT------SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeECCC------CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcC
Confidence 22222 33466788999999988655543 258889888887654 677765432 467777777666669
Q ss_pred cceeee
Q 013813 310 CEGVLS 315 (436)
Q Consensus 310 aDgVmI 315 (436)
++.|.-
T Consensus 142 ~~rILT 147 (256)
T 1twd_A 142 IARVLT 147 (256)
T ss_dssp CCEEEE
T ss_pred CCEEEC
Confidence 998873
No 443
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=91.04 E-value=0.97 Score=43.77 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=46.6
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
+++...+.| +.+++|+|.||||.-+-.+ |.-.-......+.+..+++++++. ++||+|-..- .+.++
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrp----ga~~v~~~eE~~Rv~pvi~~l~~~-~~piSIDT~~-------~~va~ 94 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRP----GATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMR-------ADVAR 94 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC------------------HHHHHHHHHHHHHT-TCCEEEECSC-------HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCC----CCCCCCHHHHHHHHHHHHHHhhcC-CCEEEEeCCC-------HHHHH
Confidence 566666555 5778999999999532111 100112234456677777777765 8999998321 23566
Q ss_pred HHHHcCccEE-Eecc
Q 013813 247 MLEDAGCSLL-AVHG 260 (436)
Q Consensus 247 ~le~aG~d~I-~VHg 260 (436)
.+.++|++.| .|.|
T Consensus 95 aAl~aGa~iINdvsg 109 (280)
T 1eye_A 95 AALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHTTCCEEEETTT
T ss_pred HHHHcCCCEEEECCC
Confidence 6667788877 3443
No 444
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=90.77 E-value=1.4 Score=43.97 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=60.5
Q ss_pred cccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHH
Q 013813 203 GAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVK 282 (436)
Q Consensus 203 Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik 282 (436)
||.=++|..+++++- ..++||.+|.-.. +.++....++.+.+.|.+.+.+|+-+.-+. .....|+..|..++
T Consensus 118 ~S~~~~N~pLL~~va-----~~gKPviLstGms-tl~Ei~~Ave~i~~~g~~viLlhC~s~YPt--~~~~~nL~aI~~Lk 189 (350)
T 3g8r_A 118 ASCSFTDWPLLERIA-----RSDKPVVASTAGA-RREDIDKVVSFMLHRGKDLTIMHCVAEYPT--PDDHLHLARIKTLR 189 (350)
T ss_dssp CSSSTTCHHHHHHHH-----TSCSCEEEECTTC-CHHHHHHHHHHHHTTTCCEEEEECCCCSSC--CGGGCCTTHHHHHH
T ss_pred CcccccCHHHHHHHH-----hhCCcEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCC--CcccCCHHHHHHHH
Confidence 455578888777664 3689999996554 778888888888888988667786543221 12357899999999
Q ss_pred hhC-CCcEEEc
Q 013813 283 NAL-RIPVLAN 292 (436)
Q Consensus 283 ~~~-~iPVian 292 (436)
+.. ++||..+
T Consensus 190 ~~fp~lpVG~S 200 (350)
T 3g8r_A 190 QQYAGVRIGYS 200 (350)
T ss_dssp HHCTTSEEEEE
T ss_pred HHCCCCCEEcC
Confidence 988 8999776
No 445
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=90.76 E-value=3.9 Score=37.65 Aligned_cols=141 Identities=13% Similarity=0.067 Sum_probs=71.7
Q ss_pred EEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccE-EEEe--ccC
Q 013813 160 LFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPV-SCKI--RVF 235 (436)
Q Consensus 160 livQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPV-sVKi--Rlg 235 (436)
+.++........+.++.+.+ +.|+|+|||....|...... ..+.+.+.++++. .++.+ ++-. ...
T Consensus 9 lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~-------~~~~~~~~~~~~~----~gl~~~~~~~~~~~~ 77 (272)
T 2q02_A 9 FCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTD-------DLNYNQVRNLAEK----YGLEIVTINAVYPFN 77 (272)
T ss_dssp EEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTT-------TCCHHHHHHHHHH----TTCEEEEEEEETTTT
T ss_pred hhhcccccCCCCHHHHHHHHHHcCCCEEEeecccccccccc-------ccCHHHHHHHHHH----cCCeEEechhhhccC
Confidence 55555443222344555444 45999999987555311100 1234444444433 35554 3322 121
Q ss_pred C-C---hhhHHHHHHHHHHcCccEEEeccCcccccCCCC-C-ccCHHHHHHHHhhCCCcEEEc------cCCCCHHHHHH
Q 013813 236 P-N---LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-F-RADWNAIKAVKNALRIPVLAN------GNVRHMEDVQK 303 (436)
Q Consensus 236 ~-~---~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-g-~ad~~~i~~ik~~~~iPVian------GGI~s~eda~~ 303 (436)
. + .+...+.++.+.+.|++.|.+|+..... .... . ...+..+..+.+..++.+..- .-+.+.+++.+
T Consensus 78 ~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~ 156 (272)
T 2q02_A 78 QLTEEVVKKTEGLLRDAQGVGARALVLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQ 156 (272)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHH
Confidence 1 1 1234566777889999999998654321 0000 0 001122223333446665442 24678999999
Q ss_pred HHHhcCccee
Q 013813 304 CLEETGCEGV 313 (436)
Q Consensus 304 ~l~~tGaDgV 313 (436)
+++..+ +.|
T Consensus 157 l~~~v~-~~~ 165 (272)
T 2q02_A 157 LIREAG-SPF 165 (272)
T ss_dssp HHHHHT-CCC
T ss_pred HHHHhC-cCe
Confidence 998766 544
No 446
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.75 E-value=1.8 Score=42.01 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHcCCCcEEEEecCC-CchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc--C------CC
Q 013813 167 NDPEILLNAARRVEPYCDYVDINLGC-PQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV--F------PN 237 (436)
Q Consensus 167 ~d~e~~~~AA~~v~~g~D~IdLN~GC-P~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl--g------~~ 237 (436)
.+.+.+..|+ +.|++.|.+-.++ +..+ +.+.+-...+..+.+.++++.+++. ++.|.+-+-. + .+
T Consensus 84 ~~~~~i~~a~---~aG~~~v~i~~~~s~~~~--~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~ 157 (302)
T 2ftp_A 84 PNLKGFEAAL---ESGVKEVAVFAAASEAFS--QRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDVD 157 (302)
T ss_dssp CSHHHHHHHH---HTTCCEEEEEEESCHHHH--HHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCCC
T ss_pred CCHHHHHHHH---hCCcCEEEEEEecCHHHH--HHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCC
Confidence 5666555544 4689998885544 3211 1123334455566677777776643 5555433322 2 34
Q ss_pred hhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEcc----CCCCHHHHHHHHHhcCcce
Q 013813 238 LQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANG----NVRHMEDVQKCLEETGCEG 312 (436)
Q Consensus 238 ~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianG----GI~s~eda~~~l~~tGaDg 312 (436)
.+...++++.+.+.|++.|.+-.-... .......+.++.+++.+ ++|+..-| |.. ...+..+++. |++.
T Consensus 158 ~~~~~~~~~~~~~~G~d~i~l~DT~G~----~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla-~An~laAv~a-Ga~~ 231 (302)
T 2ftp_A 158 PRQVAWVARELQQMGCYEVSLGDTIGV----GTAGATRRLIEAVASEVPRERLAGHFHDTYGQA-LANIYASLLE-GIAV 231 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESSSC----CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCH-HHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCC----cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHH-HHHHHHHHHh-CCCE
Confidence 577889999999999999988521111 11123467888888887 68987665 343 3456677775 9998
Q ss_pred eeeehH
Q 013813 313 VLSAES 318 (436)
Q Consensus 313 VmIGRg 318 (436)
|-..=+
T Consensus 232 vd~tv~ 237 (302)
T 2ftp_A 232 FDSSVA 237 (302)
T ss_dssp EEEBGG
T ss_pred EEeccc
Confidence 776544
No 447
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=90.72 E-value=0.43 Score=44.51 Aligned_cols=86 Identities=13% Similarity=0.173 Sum_probs=56.9
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCC-----------CccC----HHHHHHHHhhCCCcEEEccCCCC---
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-----------FRAD----WNAIKAVKNALRIPVLANGNVRH--- 297 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-----------g~ad----~~~i~~ik~~~~iPVianGGI~s--- 297 (436)
++.++..+.++.++++ +|.|.+---..++...+. ...+ .+.++++++.+++||.+-++++.
T Consensus 16 ~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~ 94 (248)
T 1geq_A 16 PDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYR 94 (248)
T ss_dssp SCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhh
Confidence 3447888999999999 999987511111110000 0112 67888999888999888766654
Q ss_pred ---HHHHHHHHHhcCcceeeeehHHhhCC
Q 013813 298 ---MEDVQKCLEETGCEGVLSAESLLENP 323 (436)
Q Consensus 298 ---~eda~~~l~~tGaDgVmIGRgal~nP 323 (436)
.+.++.+++. |+|+|.++--...++
T Consensus 95 ~~~~~~~~~~~~~-Gad~v~~~~~~~~~~ 122 (248)
T 1geq_A 95 AGVRNFLAEAKAS-GVDGILVVDLPVFHA 122 (248)
T ss_dssp HCHHHHHHHHHHH-TCCEEEETTCCGGGH
T ss_pred cCHHHHHHHHHHC-CCCEEEECCCChhhH
Confidence 4677777775 999999985444333
No 448
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.65 E-value=0.68 Score=45.17 Aligned_cols=88 Identities=18% Similarity=0.292 Sum_probs=56.8
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGa 310 (436)
.|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .+..||
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~-Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPT-TTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGA 112 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTT-SCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCC
Confidence 35566778899999999999999988876421 11111124455555543 5898744444444444433 334699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 113 davlv~~P~y~~~~ 126 (304)
T 3cpr_A 113 DGLLVVTPYYSKPS 126 (304)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988876665
No 449
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.64 E-value=4.5 Score=37.85 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=89.5
Q ss_pred CCCEEEEe------cCCCHHHHHHHH---HHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCc
Q 013813 157 DRPLFVQF------CANDPEILLNAA---RRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV 226 (436)
Q Consensus 157 e~plivQL------~g~d~e~~~~AA---~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i 226 (436)
+.|+.|=| |..+.+++.... +.+ +.|+|+|-+-+--|.. .=|.+.+++++++.. ++
T Consensus 54 ~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-----------~iD~~~~~~Li~~a~---~~ 119 (224)
T 2bdq_A 54 GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN-----------HIDTEAIEQLLPATQ---GL 119 (224)
T ss_dssp TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----------SBCHHHHHHHHHHHT---TC
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-----------CcCHHHHHHHHHHhC---CC
Confidence 45666555 235566665544 333 4599999887654431 136788888887754 56
Q ss_pred cEEEEeccCCCh--hhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHH
Q 013813 227 PVSCKIRVFPNL--QDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQ 302 (436)
Q Consensus 227 PVsVKiRlg~~~--~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~ 302 (436)
+++.= |..+.. .+..+-.+.+.+.|++.|--+|..... +..-..+.++++.+.. ++-|+..|||+. +.+.
T Consensus 120 ~vTFH-RAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~----~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~-~Ni~ 193 (224)
T 2bdq_A 120 PLVFH-MAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGE----PIIENIKHIKALVEYANNRIEIMVGGGVTA-ENYQ 193 (224)
T ss_dssp CEEEC-GGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCC----CGGGGHHHHHHHHHHHTTSSEEEECSSCCT-TTHH
T ss_pred eEEEE-CchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCC----cHHHHHHHHHHHHHhhCCCeEEEeCCCCCH-HHHH
Confidence 76654 443333 555666788889999999777654321 0122356666665532 578888899974 7788
Q ss_pred HHHHhcCcceeee
Q 013813 303 KCLEETGCEGVLS 315 (436)
Q Consensus 303 ~~l~~tGaDgVmI 315 (436)
++++.+|++.+=.
T Consensus 194 ~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 194 YICQETGVKQAHG 206 (224)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHhhCCCEEcc
Confidence 8887889988763
No 450
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=90.63 E-value=0.53 Score=46.38 Aligned_cols=82 Identities=12% Similarity=0.123 Sum_probs=45.7
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAK 246 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak 246 (436)
+++...+-| +.+++|+|.||||.-+-.+....++-.-......+.+..+|+++++..++||+|-..- .+.++
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~-------~~Va~ 119 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR-------PRVMR 119 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-------HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-------HHHHH
Confidence 555555555 5678999999999532211000000000112234457778888888789999998432 12344
Q ss_pred HHHHcCccEE
Q 013813 247 MLEDAGCSLL 256 (436)
Q Consensus 247 ~le~aG~d~I 256 (436)
.+.++|++.|
T Consensus 120 aAl~aGa~iI 129 (314)
T 3tr9_A 120 EAVNTGADMI 129 (314)
T ss_dssp HHHHHTCCEE
T ss_pred HHHHcCCCEE
Confidence 4444566655
No 451
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=90.57 E-value=2.9 Score=42.51 Aligned_cols=90 Identities=9% Similarity=0.054 Sum_probs=52.6
Q ss_pred HhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCC-----CHHHHHHHHHHHc-CCCcEEEEecCCCchhh
Q 013813 124 RYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCAN-----DPEILLNAARRVE-PYCDYVDINLGCPQRIA 197 (436)
Q Consensus 124 ~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~-----d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~ 197 (436)
+-|+|++..|.+++-. ..+.....++ ..+.|+++++.-. +-..+.+++..++ .++++|-+||++
T Consensus 150 ~~GvDlll~ETi~~~~---Eakaa~~a~~--~~~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~~~avGvNC~~----- 219 (406)
T 1lt8_A 150 KKNVDFLIAEYFEHVE---EAVWAVETLI--ASGKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCHF----- 219 (406)
T ss_dssp HHTCSEEEECCCSCHH---HHHHHHHHHG--GGTSCEEEEECCBTTBCTTCCCHHHHHHHHHTTTCSEEEEESSS-----
T ss_pred hCCCCEEEEcccCCHH---HHHHHHHHHH--HhCCcEEEEEEECCCCCcCCCcHHHHHHHhhcCCCCEEEecCCC-----
Confidence 3489999999887521 0001111122 1247888887531 2223444444443 479999999853
Q ss_pred hcCcccccccCChHHHHHHHHHHhccc-----CccEEEEecc
Q 013813 198 RRGNYGAFLMDNLPLVKSLVEKLALNL-----NVPVSCKIRV 234 (436)
Q Consensus 198 ~~~~~Gs~Ll~~p~~v~eIv~av~~~~-----~iPVsVKiRl 234 (436)
.|+.+..+++.+++.. ++||+|.=..
T Consensus 220 -----------gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNa 250 (406)
T 1lt8_A 220 -----------DPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 250 (406)
T ss_dssp -----------CHHHHHHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred -----------CHHHHHHHHHHHHHhhhhcCCCccEEEecCC
Confidence 2566677777776543 7899988443
No 452
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=90.53 E-value=10 Score=35.34 Aligned_cols=137 Identities=11% Similarity=0.076 Sum_probs=82.4
Q ss_pred CEEEEecC-CCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 159 PLFVQFCA-NDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 159 plivQL~g-~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
.+++-|.| .+.+++.+.++.+ +.|+|.||+=+.+ +.. .+.+.+.+.++.+++.. ++|+.+=+|.-
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~---------l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQ---------FEN---VTVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTT---------STT---CCHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecc---------ccc---CCHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 37799999 9998877766555 5589999998653 111 14678889999998877 78999988862
Q ss_pred -------CChhhHHHHHHHHHHc-CccEEEeccCcccccCCCCCccCHHHHHHHH---hhCCCcEEEcc----CCCCHHH
Q 013813 236 -------PNLQDTIKYAKMLEDA-GCSLLAVHGRTRDEKDGKKFRADWNAIKAVK---NALRIPVLANG----NVRHMED 300 (436)
Q Consensus 236 -------~~~~d~~~~ak~le~a-G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik---~~~~iPVianG----GI~s~ed 300 (436)
.+.++-.++.+.+.+. |+++|.|--.... +-+.++.+. ...+..||++= +--+.++
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~e 143 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADI---------DIEKHQRIITHLQQYNKEVIISHHNFESTPPLDE 143 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTTS---------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCCC---------ChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHH
Confidence 1334556677777766 6999988543200 112233332 23356777663 2334455
Q ss_pred HHHHHH---hcCcceeeee
Q 013813 301 VQKCLE---ETGCEGVLSA 316 (436)
Q Consensus 301 a~~~l~---~tGaDgVmIG 316 (436)
+.+.++ ..|||.|=|+
T Consensus 144 l~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 144 LQFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp HHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 555443 3588877655
No 453
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.53 E-value=0.57 Score=45.71 Aligned_cols=88 Identities=22% Similarity=0.323 Sum_probs=58.1
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH---HhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l---~~tGa 310 (436)
.|.+...++++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++. +..|+
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~-Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 111 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESPT-TTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGA 111 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhh-CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 35567778899999999999999988876421 11111124455555544 68988655544555555433 34599
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+....+..|.
T Consensus 112 davlv~~P~y~~~s 125 (304)
T 3l21_A 112 HGLLVVTPYYSKPP 125 (304)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988877764
No 454
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=90.49 E-value=1 Score=42.96 Aligned_cols=159 Identities=19% Similarity=0.149 Sum_probs=89.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEec-CCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRV-EPYCDYVDINL-GCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~-GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.|++ =+...|.-. |+++ +.|||.|=+-- +.- . .-||-....-..+.+...++.|.+.+++||++-+-.
T Consensus 19 ~~~i~-~~~ayD~~s----A~~~~~aG~dai~vg~~s~a--~--~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~ 89 (255)
T 2qiw_A 19 GKLLV-LPTVWDTWS----AGLVEEAGFSGLTIGSHPVA--D--ATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVES 89 (255)
T ss_dssp CCCEE-CCEESSHHH----HHHHHHTTCSCEEECHHHHH--H--HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTT
T ss_pred CCcEE-EecCcCHHH----HHHHHHcCCCEEEEChHHHH--H--hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCC
Confidence 44543 355556432 3344 35888886651 111 1 122333344566778888888888889999999988
Q ss_pred CCChhhHHHHHHHHHHcCccEEEeccCcccccCCCC-Ccc--CHHHHHHHHhh---CCCcEEEccCCCC-----------
Q 013813 235 FPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKK-FRA--DWNAIKAVKNA---LRIPVLANGNVRH----------- 297 (436)
Q Consensus 235 g~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~-g~a--d~~~i~~ik~~---~~iPVianGGI~s----------- 297 (436)
|..... .+.++.+.++|+++|.+-+..... +.. .+. -.+.|+.+++. .++|++.+|-...
T Consensus 90 Gyg~~~-~~~~~~l~~aGa~gv~iEd~~~~~--~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~ 166 (255)
T 2qiw_A 90 GYGLSP-ADLIAQILEAGAVGINVEDVVHSE--GKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDP 166 (255)
T ss_dssp CTTCCH-HHHHHHHHHTTCCEEEECSEEGGG--TTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSH
T ss_pred CcCcHH-HHHHHHHHHcCCcEEEECCCCCCC--CCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHH
Confidence 753222 777888889999999997654211 100 011 12334444443 2688666665443
Q ss_pred HHHH----HHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 298 MEDV----QKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 298 ~eda----~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
.+++ +.+.+ .|||+|++= + +.++...+++.
T Consensus 167 ~~~ai~ra~a~~e-AGAd~i~~e-~-~~~~~~~~~i~ 200 (255)
T 2qiw_A 167 MVEAIKRIKLMEQ-AGARSVYPV-G-LSTAEQVERLV 200 (255)
T ss_dssp HHHHHHHHHHHHH-HTCSEEEEC-C-CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCcEEEEc-C-CCCHHHHHHHH
Confidence 2333 23333 499999882 2 33334444443
No 455
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=90.46 E-value=0.57 Score=45.42 Aligned_cols=87 Identities=16% Similarity=0.250 Sum_probs=57.7
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH---HhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l---~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+-|-|.+... .+..-..+.++.+.+.+ ++|||+.-|-.+.+++.++. +..|||
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~-Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPT-LTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccccc-CCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 5566778889999999999999888776421 11111124455555543 68988655555556655443 345999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 100 avlv~~P~y~~~~ 112 (292)
T 3daq_A 100 AIMLITPYYNKTN 112 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988776664
No 456
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=90.38 E-value=1.1 Score=44.31 Aligned_cols=95 Identities=15% Similarity=0.312 Sum_probs=60.1
Q ss_pred ccccCChHH-----HHHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHH
Q 013813 204 AFLMDNLPL-----VKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNA 277 (436)
Q Consensus 204 s~Ll~~p~~-----v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~ 277 (436)
+.|.++... +.+.++++++.. ..++.|=+. +.++ ++.+.++|+|.|-+..- +.+.
T Consensus 204 ~vlikdnHi~~~G~i~~Av~~ar~~~p~~kIeVEVd---tlde----a~eAl~aGaD~I~LDn~------------~~~~ 264 (320)
T 3paj_A 204 AYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETE---TLAE----LEEAISAGADIIMLDNF------------SLEM 264 (320)
T ss_dssp CEEECHHHHHHHTSHHHHHHHHHHHSTTSCEEEEES---SHHH----HHHHHHTTCSEEEEESC------------CHHH
T ss_pred hhccHHHHHHHhCCHHHHHHHHHHhCCCCeEEEEEC---CHHH----HHHHHHcCCCEEEECCC------------CHHH
Confidence 445555442 234555555544 345555432 2333 34455689999988542 2355
Q ss_pred HHHHHhhC--CCcEEEccCCCCHHHHHHHHHhcCcceeeeehHH
Q 013813 278 IKAVKNAL--RIPVLANGNVRHMEDVQKCLEETGCEGVLSAESL 319 (436)
Q Consensus 278 i~~ik~~~--~iPVianGGI~s~eda~~~l~~tGaDgVmIGRga 319 (436)
++++++.+ +++|.++|||+ .+.+.++.+ +|+|++.+|.--
T Consensus 265 l~~av~~l~~~v~ieaSGGIt-~~~I~~~a~-tGVD~isvGalt 306 (320)
T 3paj_A 265 MREAVKINAGRAALENSGNIT-LDNLKECAE-TGVDYISVGALT 306 (320)
T ss_dssp HHHHHHHHTTSSEEEEESSCC-HHHHHHHHT-TTCSEEECTHHH
T ss_pred HHHHHHHhCCCCeEEEECCCC-HHHHHHHHH-cCCCEEEECcee
Confidence 66666554 78999999996 788888765 699999999643
No 457
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.33 E-value=0.63 Score=45.21 Aligned_cols=87 Identities=17% Similarity=0.247 Sum_probs=57.1
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .+..|+|
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESAT-LSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccc-CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 5566778888999999999999988876421 11111123445555543 5898865444455555443 3446999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 105 avlv~~P~y~~~~ 117 (297)
T 3flu_A 105 YTLSVVPYYNKPS 117 (297)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877665
No 458
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.22 E-value=0.64 Score=45.29 Aligned_cols=86 Identities=21% Similarity=0.344 Sum_probs=55.9
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEE-ccCCCCHHHHHHH---HHhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLA-NGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVia-nGGI~s~eda~~~---l~~tGa 310 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+ .|+..+ +++.+. .+..||
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~-Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t-~~ai~la~~A~~~Ga 108 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGESPT-LTSEEKVALYRHVVSVVDKRVPVIAGTGSNNT-HASIDLTKKATEVGV 108 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSCH-HHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCceEEeCCCCCCH-HHHHHHHHHHHhcCC
Confidence 4556678889999999999999888876421 11111124445555543 589874 455444 444433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 109 davlv~~P~y~~~s 122 (301)
T 1xky_A 109 DAVMLVAPYYNKPS 122 (301)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999988877665
No 459
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.19 E-value=2.7 Score=41.41 Aligned_cols=163 Identities=10% Similarity=-0.004 Sum_probs=91.8
Q ss_pred CCEEEEecCCCHHHHHHHHHHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccC
Q 013813 158 RPLFVQFCANDPEILLNAARRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVF 235 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg 235 (436)
.|+ +=+...|.-. |+++ +.|||.|=+--. ...++.- |+-....-..+.+...++.|.+.+ ++||++.+-.|
T Consensus 39 ~~i-~~~~ayD~~s----A~i~e~aGfdai~vs~~-~~a~~~l-G~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~G 111 (318)
T 1zlp_A 39 GSV-LMPGVQDALS----AAVVEKTGFHAAFVSGY-SVSAAML-GLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTG 111 (318)
T ss_dssp SSE-EEEEECSHHH----HHHHHHTTCSEEEECHH-HHHHHHH-CCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTC
T ss_pred CcE-EEecCCCHHH----HHHHHHcCCCEEEECcH-HHhhHhc-CCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCC
Confidence 444 3466667543 3344 358999876521 1111111 122223445677788888888888 99999999887
Q ss_pred C-ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCC---ccC-HHHHHH---HHhhC-CCcEEEccCCCCH--------
Q 013813 236 P-NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKF---RAD-WNAIKA---VKNAL-RIPVLANGNVRHM-------- 298 (436)
Q Consensus 236 ~-~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g---~ad-~~~i~~---ik~~~-~iPVianGGI~s~-------- 298 (436)
. +..++.+.++.+.++|+++|.+-+.....+.+..+ -.. -+.+.+ +++.. .-+++.+|.....
T Consensus 112 yg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~a 191 (318)
T 1zlp_A 112 GGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEG 191 (318)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHH
Confidence 4 45677888999999999999997665322211110 111 133334 33332 3345555544432
Q ss_pred -HHHHHHHHhcCcceeeeehHHhhCCccchhhh
Q 013813 299 -EDVQKCLEETGCEGVLSAESLLENPALFAGFR 330 (436)
Q Consensus 299 -eda~~~l~~tGaDgVmIGRgal~nP~lf~~i~ 330 (436)
++++.+.+ .|||+|++= + +.++..++++.
T Consensus 192 i~Ra~Ay~e-AGAd~i~~e-~-~~~~e~~~~i~ 221 (318)
T 1zlp_A 192 IRRANLYKE-AGADATFVE-A-PANVDELKEVS 221 (318)
T ss_dssp HHHHHHHHH-TTCSEEEEC-C-CCSHHHHHHHH
T ss_pred HHHHHHHHH-cCCCEEEEc-C-CCCHHHHHHHH
Confidence 23333334 599999873 2 24444555443
No 460
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.19 E-value=0.62 Score=45.08 Aligned_cols=87 Identities=15% Similarity=0.276 Sum_probs=57.3
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .+..|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEAST-LSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccccccc-CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 5566778889999999999999888876421 11111124445555543 5898865454455555543 3346999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 99 avlv~~P~y~~~~ 111 (291)
T 3tak_A 99 AALLVTPYYNKPT 111 (291)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999988877775
No 461
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=90.18 E-value=1.4 Score=44.62 Aligned_cols=97 Identities=11% Similarity=0.142 Sum_probs=72.2
Q ss_pred HHHHHHHHhcccC--ccEEEEeccC------CChhhHHHHHHHHHHc--Ccc-EEEeccCcccccCCCC-CccCHHHHHH
Q 013813 213 VKSLVEKLALNLN--VPVSCKIRVF------PNLQDTIKYAKMLEDA--GCS-LLAVHGRTRDEKDGKK-FRADWNAIKA 280 (436)
Q Consensus 213 v~eIv~av~~~~~--iPVsVKiRlg------~~~~d~~~~ak~le~a--G~d-~I~VHgRt~~~~~~~~-g~ad~~~i~~ 280 (436)
..+.+++|++.++ +.+.+-..-+ ++.++++++++.+++. ++. +| ++..... .+-||+..++
T Consensus 218 d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~~~~a~~~~~~L~~~~~~i~~~i-------EqP~~~~~~~~d~~~~~~ 290 (413)
T 1kcz_A 218 LRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAMADYIQTLAEAAKPFHLRI-------EGPMDVEDRQKQMEAMRD 290 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHHHHHHTTSCEEE-------ECSBCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEecCCCcccccCCCHHHHHHHHHHHHhhcCCcceEE-------ecCCCCCCCcccHHHHHH
Confidence 4577888888774 5566665556 7888999999999987 555 33 2110000 1237888899
Q ss_pred HHhh-----CCCcEEEccCCCCHHHHHHHHHhcCcceeeee
Q 013813 281 VKNA-----LRIPVLANGNVRHMEDVQKCLEETGCEGVLSA 316 (436)
Q Consensus 281 ik~~-----~~iPVianGGI~s~eda~~~l~~tGaDgVmIG 316 (436)
+++. .++||.+.=.+.+.+++.++++...+|.|.+=
T Consensus 291 l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik 331 (413)
T 1kcz_A 291 LRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIK 331 (413)
T ss_dssp HHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEEC
T ss_pred HHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 9988 78999998889999999999998788988764
No 462
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.18 E-value=0.91 Score=42.86 Aligned_cols=102 Identities=19% Similarity=0.255 Sum_probs=58.5
Q ss_pred HHHHHHHHhcccCccEEEEeccC-CChhhHHHHHHHHHHcCccEEEeccCccccc---------------CCCCCccCHH
Q 013813 213 VKSLVEKLALNLNVPVSCKIRVF-PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEK---------------DGKKFRADWN 276 (436)
Q Consensus 213 v~eIv~av~~~~~iPVsVKiRlg-~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~---------------~~~~g~ad~~ 276 (436)
+.+.++.+++.-...+..=+=.| ++.++..+.++.++++|+|.|.+-.-..++. .+.....-++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~ 84 (262)
T 1rd5_A 5 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLE 84 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 34455555433222333222233 4557888999999999999998842222111 0000011246
Q ss_pred HHHHHHhhCCCcEEEccCCCCHH---HHHHHHHhcCcceeeee
Q 013813 277 AIKAVKNALRIPVLANGNVRHME---DVQKCLEETGCEGVLSA 316 (436)
Q Consensus 277 ~i~~ik~~~~iPVianGGI~s~e---da~~~l~~tGaDgVmIG 316 (436)
.++++++.+++||++++... +. .++.+.+ .|+|+|.+.
T Consensus 85 ~i~~ir~~~~~Pv~~m~~~~-~~~~~~~~~a~~-aGadgv~v~ 125 (262)
T 1rd5_A 85 MLREVTPELSCPVVLLSYYK-PIMFRSLAKMKE-AGVHGLIVP 125 (262)
T ss_dssp HHHHHGGGCSSCEEEECCSH-HHHSCCTHHHHH-TTCCEEECT
T ss_pred HHHHHHhcCCCCEEEEecCc-HHHHHHHHHHHH-cCCCEEEEc
Confidence 68888888899999875222 21 1233555 599999985
No 463
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.17 E-value=6.5 Score=37.35 Aligned_cols=130 Identities=17% Similarity=0.192 Sum_probs=85.2
Q ss_pred CCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCC---ChhhHH
Q 013813 166 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFP---NLQDTI 242 (436)
Q Consensus 166 g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~---~~~d~~ 242 (436)
|-.+..+....+.+.++.|++-+- +|++.+-..+.+++.++-.+++ +++|+..=-+.. .-....
T Consensus 22 glg~~~~~d~Le~~g~yID~lKfg------------~Gt~~l~~~~~l~eki~l~~~~-gV~v~~GGTl~E~~~~qg~~~ 88 (251)
T 1qwg_A 22 GLPPKFVEDYLKVCGDYIDFVKFG------------WGTSAVIDRDVVKEKINYYKDW-GIKVYPGGTLFEYAYSKGKFD 88 (251)
T ss_dssp SCCHHHHHHHHHHHGGGCSEEEEC------------TTGGGGSCHHHHHHHHHHHHTT-TCEEEECHHHHHHHHHTTCHH
T ss_pred CCCHHHHHHHHHHhhhhcceEEec------------CceeeecCHHHHHHHHHHHHHc-CCeEECCcHHHHHHHHcCcHH
Confidence 456677777777777788998876 5777777888999999887654 666665411000 012445
Q ss_pred HHHHHHHHcCccEEEeccCcccccCCCCCccCH-HHHHHHHhhCCCcEEEccCCCCH--------H----HHHHHHHhcC
Q 013813 243 KYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADW-NAIKAVKNALRIPVLANGNVRHM--------E----DVQKCLEETG 309 (436)
Q Consensus 243 ~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~-~~i~~ik~~~~iPVianGGI~s~--------e----da~~~l~~tG 309 (436)
++.+.+.+.|.+.|-|...+.+-. .-+| ++|+++++. +..|+..=|..++ + .+++.|+. |
T Consensus 89 ~yl~~~k~lGf~~iEiS~G~i~l~-----~~~~~~~I~~~~~~-G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeA-G 161 (251)
T 1qwg_A 89 EFLNECEKLGFEAVEISDGSSDIS-----LEERNNAIKRAKDN-GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDA-G 161 (251)
T ss_dssp HHHHHHHHHTCCEEEECCSSSCCC-----HHHHHHHHHHHHHT-TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHcCCCEEEECCCcccCC-----HHHHHHHHHHHHHC-CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHC-C
Confidence 678888999999999988776421 1223 466666654 4455554344444 3 34556676 9
Q ss_pred cceeee
Q 013813 310 CEGVLS 315 (436)
Q Consensus 310 aDgVmI 315 (436)
|+.|||
T Consensus 162 A~~Vii 167 (251)
T 1qwg_A 162 ADYVII 167 (251)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 999998
No 464
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=90.15 E-value=0.75 Score=44.75 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=56.5
Q ss_pred HHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE
Q 013813 214 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL 290 (436)
Q Consensus 214 ~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi 290 (436)
.+.++.+++.. .+++.|-+. +.+ -++.+.++|+|.|-+..-+ .+.++++.+.+ ++++.
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~---tl~----ea~eAl~aGaD~I~LDn~~------------~~~l~~av~~~~~~v~ie 246 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT---NLD----ELNQAIAAKADIVMLDNFS------------GEDIDIAVSIARGKVALE 246 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES---SHH----HHHHHHHTTCSEEEEESCC------------HHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeC---CHH----HHHHHHHcCCCEEEEcCCC------------HHHHHHHHHhhcCCceEE
Confidence 34455555432 456666432 223 3444567899999886422 24455555543 78999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++|||+ .+.+.++.+ +|+|.+.+|.-.-.-|+
T Consensus 247 aSGGIt-~~~i~~~a~-tGVD~IsvGalt~sa~~ 278 (287)
T 3tqv_A 247 VSGNID-RNSIVAIAK-TGVDFISVGAITKHIKA 278 (287)
T ss_dssp EESSCC-TTTHHHHHT-TTCSEEECSHHHHSBCC
T ss_pred EECCCC-HHHHHHHHH-cCCCEEEEChhhcCCcc
Confidence 999995 688888665 69999999854433333
No 465
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.09 E-value=0.57 Score=45.98 Aligned_cols=87 Identities=16% Similarity=0.289 Sum_probs=57.2
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH---HhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l---~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|+|
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~-Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESAT-LDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGG-CCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 5566778888999999999999888876421 11111123444455543 58988655544555555433 346999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 121 avlv~~P~y~~~s 133 (314)
T 3qze_A 121 ACLLVTPYYNKPT 133 (314)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999988877775
No 466
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=90.08 E-value=0.35 Score=47.44 Aligned_cols=120 Identities=14% Similarity=0.158 Sum_probs=81.5
Q ss_pred CCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc-CccEEEEeccCCChhhHHHH
Q 013813 166 ANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL-NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 166 g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ 244 (436)
..+++++++.++.. .|+..+-+..|.+ +++.-.+.++++++.+ ++.+.|-..-+++.+++.++
T Consensus 113 ~~~~~~~~~~a~~~-~G~~~~KiKvG~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~ 176 (322)
T 1r6w_A 113 NGDPDDLILKLADM-PGEKVAKVRVGLY---------------EAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQF 176 (322)
T ss_dssp CSCHHHHHHHHHTC-CSSEEEEEECSSS---------------CHHHHHHHHHHHHHHCTTEEEEEECTTCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHh-CCCceEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHH
Confidence 56888877666543 6888888876531 3555567778887766 34455554457888889999
Q ss_pred HHHHHHc---CccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHHHhcCcceeee
Q 013813 245 AKMLEDA---GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 245 ak~le~a---G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l~~tGaDgVmI 315 (436)
++.+++. ++.+| ++. . .+++..+++++.+++||.+.=.+.+.+ . +.++..++|.|++
T Consensus 177 ~~~l~~~~~~~i~~i-------EqP--~---~~~~~~~~l~~~~~ipIa~dE~~~~~~-~-~~~~~~a~d~i~i 236 (322)
T 1r6w_A 177 AKYVNPDYRDRIAFL-------EEP--C---KTRDDSRAFARETGIAIAWDESLREPD-F-AFVAEEGVRAVVI 236 (322)
T ss_dssp HHTSCTTTGGGEEEE-------ECC--B---SSHHHHHHHHHHHCCCEEESGGGGSTT-C-CCCCCTTEEEEEE
T ss_pred HHHhhhhccCCeeEE-------ECC--C---CChHHHHHHHHhCCCCEEeCCCCCChh-H-hhhhcCCCCEEEE
Confidence 9988887 66655 211 1 246778888888899999988887743 3 4444446676654
No 467
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=90.03 E-value=1.8 Score=46.01 Aligned_cols=63 Identities=30% Similarity=0.401 Sum_probs=44.0
Q ss_pred HHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHc--C
Q 013813 175 AARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDA--G 252 (436)
Q Consensus 175 AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~a--G 252 (436)
|.+.+++|+|.||||.| +......+.+.+++..+++.+++||+|-.. + .+.++...++ |
T Consensus 346 A~~~v~~GAdiIDIgpg------------~~~v~~~ee~~rvv~~i~~~~~vpisIDT~---~----~~v~eaal~~~~G 406 (566)
T 1q7z_A 346 AKTQVEKGAEVLDVNFG------------IESQIDVRYVEKIVQTLPYVSNVPLSLDIQ---N----VDLTERALRAYPG 406 (566)
T ss_dssp HHHHHHTTCSEEEEECS------------SGGGSCHHHHHHHHHHHHHHTCSCEEEECC---C----HHHHHHHHHHCSS
T ss_pred HHHHHHCCCCEEEECCC------------CCCCCHHHHHHHHHHHHHhhCCceEEEeCC---C----HHHHHHHHHhcCC
Confidence 33567889999999943 333466788899999888778999999832 1 1234444455 8
Q ss_pred ccEE
Q 013813 253 CSLL 256 (436)
Q Consensus 253 ~d~I 256 (436)
++.|
T Consensus 407 ~~iI 410 (566)
T 1q7z_A 407 RSLF 410 (566)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 7765
No 468
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=90.02 E-value=2.6 Score=42.20 Aligned_cols=130 Identities=12% Similarity=0.008 Sum_probs=0.0
Q ss_pred CHHHHHHHH-HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhccc--CccEEEEeccCCChhhHHHH
Q 013813 168 DPEILLNAA-RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNL--NVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 168 d~e~~~~AA-~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~--~iPVsVKiRlg~~~~d~~~~ 244 (436)
|.+.+.+-+ ..++.|+|+|=++ |.-|-+..-..+.=.++++.+.+.+ .+||.+.+ .+.+..+++++
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~----------GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv-g~~st~eai~l 146 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVG----------GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT-GSNSTREAIHA 146 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES----------STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEec----------ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec-CCCCHHHHHHH
Q ss_pred HHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc------cCCCCHHHHHHHHHhcCccee
Q 013813 245 AKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN------GNVRHMEDVQKCLEETGCEGV 313 (436)
Q Consensus 245 ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian------GGI~s~eda~~~l~~tGaDgV 313 (436)
++.++++|+|++.+..-....... ..-+++.+.|.+. +||+.- |---+++.+.++.+..++-||
T Consensus 147 a~~A~~~Gadavlvv~PyY~k~sq---~gl~~hf~~IA~a--~PiilYNiP~rTg~~ls~e~l~~La~~pnIvGI 216 (360)
T 4dpp_A 147 TEQGFAVGMHAALHINPYYGKTSI---EGLIAHFQSVLHM--GPTIIYNVPGRTGQDIPPRAIFKLSQNPNLAGV 216 (360)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCCH---HHHHHHHHTTGGG--SCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCCCCCH---HHHHHHHHHHHHh--CCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEE
No 469
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.98 E-value=0.66 Score=44.93 Aligned_cols=87 Identities=16% Similarity=0.231 Sum_probs=56.7
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHHH---hcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCLE---ETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l~---~tGaD 311 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+..+ ..|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESAT-LNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 5566778889899999999999988876421 11111124445555543 589875444444455554433 35999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+-...+..|.
T Consensus 99 avlv~~P~y~~~s 111 (292)
T 2ojp_A 99 GCLTVTPYYNRPS 111 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877664
No 470
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=89.94 E-value=2.6 Score=38.30 Aligned_cols=118 Identities=18% Similarity=0.218 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cCccEEEEeccCCChhhHHHHH
Q 013813 168 DPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNVPVSCKIRVFPNLQDTIKYA 245 (436)
Q Consensus 168 d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~iPVsVKiRlg~~~~d~~~~a 245 (436)
+.++..+.++.+......++++.|.=. .+| ++ +++++++. ..+++.+| +.+-......++
T Consensus 10 ~l~~~~~~~~~~~~~~~~~kv~~~~f~------~~G------~~----~i~~lr~~~~~~v~~D~k--l~DI~~t~~~~v 71 (208)
T 2czd_A 10 EGERAIKIAKSVKDYISMIKVNWPLIL------GSG------VD----IIRRLKEETGVEIIADLK--LADIPNTNRLIA 71 (208)
T ss_dssp SHHHHHHHHHHHGGGCSEEEEEHHHHH------HHC------TT----HHHHHHHHHCCEEEEEEE--ECSCHHHHHHHH
T ss_pred CHHHHHHHHHHhcccccEEEecHHHHH------hhC------HH----HHHHHHHcCCCEEEEEee--eCchHHHHHHHH
Confidence 333333333333344678888854210 123 22 33445544 45677777 543334556778
Q ss_pred HHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCC----------HHHHHHHHHhcCcceeee
Q 013813 246 KMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRH----------MEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 246 k~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s----------~eda~~~l~~tGaDgVmI 315 (436)
+.+.++|+|.|+||+-... +.++.+++..++.+ +-+... .+.+..+-.+.|++|+.+
T Consensus 72 ~~~~~~Gad~vtvh~~~g~-----------~~i~~~~~~~gv~v--l~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~ 138 (208)
T 2czd_A 72 RKVFGAGADYVIVHTFVGR-----------DSVMAVKELGEIIM--VVEMSHPGALEFINPLTDRFIEVANEIEPFGVIA 138 (208)
T ss_dssp HHHHHTTCSEEEEESTTCH-----------HHHHHHHTTSEEEE--ECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEEC
T ss_pred HHHHhcCCCEEEEeccCCH-----------HHHHHHHHhCCcEE--EEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEE
Confidence 8889999999999975421 33666666543333 333221 122233334459999876
Q ss_pred e
Q 013813 316 A 316 (436)
Q Consensus 316 G 316 (436)
+
T Consensus 139 ~ 139 (208)
T 2czd_A 139 P 139 (208)
T ss_dssp C
T ss_pred C
Confidence 6
No 471
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=89.88 E-value=0.69 Score=45.09 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=56.0
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEE-ccCCCCHHHHHHH---HHhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLA-NGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVia-nGGI~s~eda~~~---l~~tGa 310 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+ .|+..+ +++.++ .+..|+
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~-Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t-~~ai~la~~A~~~Ga 107 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEAFV-QSLSEREQVLEIVAEEAKGKIKLIAHVGCVST-AESQQLAASAKRYGF 107 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTTSEEEEECCCSSH-HHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH-HHHHHHHHHHHhCCC
Confidence 5556678889999999999999888876421 11111124445555543 689874 555444 444433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 108 davlv~~P~y~~~s 121 (303)
T 2wkj_A 108 DAVSAVTPFYYPFS 121 (303)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEecCCCCCCCC
Confidence 99999988877665
No 472
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=89.85 E-value=1.6 Score=42.77 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=64.4
Q ss_pred HHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEE-EeccCCChhhHHHHHHHHHHcCcc-
Q 013813 177 RRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC-KIRVFPNLQDTIKYAKMLEDAGCS- 254 (436)
Q Consensus 177 ~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsV-KiRlg~~~~d~~~~ak~le~aG~d- 254 (436)
+.++.|+|.||||+.+--+ | +.--.++...++|+.+++.+++|++| - .| +.+.-.+.++.+.++|++
T Consensus 82 ~~v~~GAdiIDIg~~StrP-------~-~~~vs~eee~~vV~~v~~~~~vplsI~D--T~-~~~~~~~V~eaal~aga~~ 150 (310)
T 2h9a_B 82 KCVEYGADIVALRLVSAHP-------D-GQNRSGAELAEVCKAVADAIDVPLMIIG--CG-VEEKDAEIFPVIGEALSGR 150 (310)
T ss_dssp HHHHTTCSEEEEECGGGCT-------T-TTCCCHHHHHHHHHHHHHHCSSCEEEEC--CS-CHHHHHHHHHHHHHHTTTS
T ss_pred HHHHcCCcEEEEeCccCCC-------C-CCCCCHHHHHHHHHHHHHhCCceEEEEC--CC-CCCCCHHHHHHHHHhCCCC
Confidence 5677899999999853111 1 12245677777999998888999999 5 21 122234567777788886
Q ss_pred --EE-EeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHHHHHHH
Q 013813 255 --LL-AVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 255 --~I-~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~eda~~~l 305 (436)
.| .+.+- +++.+..+....+.||++-.- .+.+.+++.+
T Consensus 151 k~iINdvs~~------------~~~~~~~~aa~~g~~vv~m~~-~dv~~l~~~~ 191 (310)
T 2h9a_B 151 NCLLSSATKD------------NYKPIVATCMVHGHSVVASAP-LDINLSKQLN 191 (310)
T ss_dssp CCEEEEECTT------------THHHHHHHHHHHTCEEEEECS-SCHHHHHHHH
T ss_pred CCEEEECCCC------------ccHHHHHHHHHhCCCEEEECh-hHHHHHHHHH
Confidence 33 23221 244555566667889887652 1334444433
No 473
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=89.75 E-value=1.4 Score=45.12 Aligned_cols=71 Identities=15% Similarity=0.316 Sum_probs=55.3
Q ss_pred CChhhHHHHHHHHHH-cCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccC-CCCHHHHHHHHHhcCcc
Q 013813 236 PNLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGN-VRHMEDVQKCLEETGCE 311 (436)
Q Consensus 236 ~~~~d~~~~ak~le~-aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGG-I~s~eda~~~l~~tGaD 311 (436)
++.++++++++.+.+ .++.+| ++.. .+-||+..+++++.+ ++||.+.-- +.+.+++.++++...+|
T Consensus 279 ~t~~eai~~~~~l~~~~~i~~i-------EePl---~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d 348 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYPIITI-------EDGM---DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAAN 348 (444)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE-------ESCS---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS
T ss_pred CCHHHHHHHHHHHHHhCCcEEE-------ECCC---ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCC
Confidence 567888899988864 776554 2111 135899999999988 899988877 99999999999987889
Q ss_pred eeeee
Q 013813 312 GVLSA 316 (436)
Q Consensus 312 gVmIG 316 (436)
.|++=
T Consensus 349 ~i~ik 353 (444)
T 1w6t_A 349 SILIK 353 (444)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88763
No 474
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=89.66 E-value=0.69 Score=44.81 Aligned_cols=87 Identities=13% Similarity=0.079 Sum_probs=56.2
Q ss_pred ChhhHHHHHHHHHH-cCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH---HhcCc
Q 013813 237 NLQDTIKYAKMLED-AGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~-aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l---~~tGa 310 (436)
|.+....+++.+.+ .|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|+
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENFM-LSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchhh-CCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 55566788888999 99999999888776421 11111124455555543 58987544444445454433 34699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 101 davlv~~P~y~~~~ 114 (293)
T 1f6k_A 101 DCLSAVTPFYYKFS 114 (293)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988877665
No 475
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=89.65 E-value=2.4 Score=41.21 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=60.8
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEe-cCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRVE-PYCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl 234 (436)
+.|+ +=+...|+-. |++++ .|||.|=+- .++-. . -|+-....-..+.+...++.|.+.+++||++-+-.
T Consensus 18 ~~~i-~~~~a~D~~s----A~~~~~aG~~ai~vsg~~~a~--~--lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~ 88 (295)
T 1s2w_A 18 KDLE-FIMEAHNGLS----ARIVQEAGFKGIWGSGLSVSA--Q--LGVRDSNEASWTQVVEVLEFMSDASDVPILLDADT 88 (295)
T ss_dssp SSCE-EEEEECSHHH----HHHHHHHTCSCEEECCHHHHH--T--C---------CHHHHHHHHHHHHTCSSCEEEECCS
T ss_pred CCcE-EEecCCCHHH----HHHHHHcCCCEEEeChHHHHH--h--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCC
Confidence 3444 3466667554 23333 488888776 22221 0 11222222345667778888888899999999887
Q ss_pred CC-ChhhHHHHHHHHHHcCccEEEeccCc
Q 013813 235 FP-NLQDTIKYAKMLEDAGCSLLAVHGRT 262 (436)
Q Consensus 235 g~-~~~d~~~~ak~le~aG~d~I~VHgRt 262 (436)
|. +..++.+.++.+.++|+++|.+-+..
T Consensus 89 Gyg~~~~v~~~v~~l~~aGaagv~iED~~ 117 (295)
T 1s2w_A 89 GYGNFNNARRLVRKLEDRGVAGACLEDKL 117 (295)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEEEECBC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEECCCC
Confidence 74 44567788899999999999997664
No 476
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=89.63 E-value=0.69 Score=44.75 Aligned_cols=88 Identities=17% Similarity=0.216 Sum_probs=56.7
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHHH---HhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKCL---EETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~l---~~tGa 310 (436)
.|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+.. +..|+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATT-MTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGV 97 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCC
Confidence 45566778889899999999999988876421 11111124445555543 58987544444445554433 44699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 98 davlv~~P~y~~~s 111 (291)
T 3a5f_A 98 DGLLVITPYYNKTT 111 (291)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999988876664
No 477
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.63 E-value=0.58 Score=45.96 Aligned_cols=87 Identities=15% Similarity=0.245 Sum_probs=57.2
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+-|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+. .+..|||
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~-Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPT-LTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccc-cCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 5566778899999999999999888776421 11111124455555543 5898765454455555543 3446999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 120 avlv~~P~y~~~~ 132 (315)
T 3si9_A 120 AVLVVTPYYNRPN 132 (315)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877664
No 478
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.59 E-value=0.67 Score=44.94 Aligned_cols=86 Identities=15% Similarity=0.130 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE-EccCCCCHHHHHHHH---HhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL-ANGNVRHMEDVQKCL---EETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi-anGGI~s~eda~~~l---~~tGa 310 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++||| +.|+.. .+++.++. +..|+
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~-t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCS-VGSRERQAILSSFIAAGIAPSRIVTGVLVDS-IEDAADQSAEALNAGA 99 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHHTTCCGGGEEEEECCSS-HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcc-HHHHHHHHHHHHhcCC
Confidence 5566778889999999999999988876421 11111224455555554 58987 455544 44444333 34699
Q ss_pred ceeeeehHHhhC-Cc
Q 013813 311 EGVLSAESLLEN-PA 324 (436)
Q Consensus 311 DgVmIGRgal~n-P~ 324 (436)
|+||+....+.. |.
T Consensus 100 davlv~~P~y~~~~s 114 (294)
T 3b4u_A 100 RNILLAPPSYFKNVS 114 (294)
T ss_dssp SEEEECCCCSSCSCC
T ss_pred CEEEEcCCcCCCCCC
Confidence 999999888766 54
No 479
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.57 E-value=0.71 Score=44.73 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=57.0
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGa 310 (436)
.|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+. .+..|+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPT-LTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 35667778899999999999999888876421 11111124445555543 5898744444444444433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 97 davlv~~P~y~~~s 110 (294)
T 2ehh_A 97 DGALVVVPYYNKPT 110 (294)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988877664
No 480
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.57 E-value=0.76 Score=44.42 Aligned_cols=87 Identities=20% Similarity=0.316 Sum_probs=56.8
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE-EccCCCCHHHHHHH---HHhcC
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL-ANGNVRHMEDVQKC---LEETG 309 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi-anGGI~s~eda~~~---l~~tG 309 (436)
.|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++||| +.|+..+ +++.+. .+..|
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t-~~ai~la~~a~~~G 95 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPT-LSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCT-EEAIELSVFAEDVG 95 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSEEEEECCCSSH-HHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH-HHHHHHHHHHHhcC
Confidence 36667778899999999999999888876431 11111124445555543 58987 4555544 444433 34469
Q ss_pred cceeeeehHHhhCCc
Q 013813 310 CEGVLSAESLLENPA 324 (436)
Q Consensus 310 aDgVmIGRgal~nP~ 324 (436)
+|+||+-...+..|.
T Consensus 96 adavlv~~P~y~~~s 110 (289)
T 2yxg_A 96 ADAVLSITPYYNKPT 110 (289)
T ss_dssp CSEEEEECCCSSCCC
T ss_pred CCEEEECCCCCCCCC
Confidence 999999988877665
No 481
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=89.55 E-value=12 Score=38.37 Aligned_cols=152 Identities=14% Similarity=0.072 Sum_probs=84.6
Q ss_pred CCEEEEecCC--CHHHHHHHHHH-HcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc---cCccEEEE
Q 013813 158 RPLFVQFCAN--DPEILLNAARR-VEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN---LNVPVSCK 231 (436)
Q Consensus 158 ~plivQL~g~--d~e~~~~AA~~-v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~---~~iPVsVK 231 (436)
.|+++=+=.. ++....+.++. ++.|+.+|.|--..... .+.|..++.-+-..+...+=|++++.+ .+.++.|=
T Consensus 153 lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~-KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~Ii 231 (435)
T 3lg3_A 153 LPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAV-KKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLI 231 (435)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGG-CBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCc-cccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 8999887432 44456666655 45699999998544211 122333333333444433333444332 35555555
Q ss_pred eccC--------------------------------CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHH
Q 013813 232 IRVF--------------------------------PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIK 279 (436)
Q Consensus 232 iRlg--------------------------------~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~ 279 (436)
-|.. ...+++++=++...+ |+|.|-++... .+.+.++
T Consensus 232 ARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~----------~~~~ei~ 300 (435)
T 3lg3_A 232 ARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETST----------PDLALAK 300 (435)
T ss_dssp EEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSS----------CCHHHHH
T ss_pred EEcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCC----------CCHHHHH
Confidence 5543 346677777888888 99999987653 2345555
Q ss_pred HHHhhCC----CcEE-EccC-CCC------HHHHHH---HHHhcCcceeeeehHHhh
Q 013813 280 AVKNALR----IPVL-ANGN-VRH------MEDVQK---CLEETGCEGVLSAESLLE 321 (436)
Q Consensus 280 ~ik~~~~----iPVi-anGG-I~s------~eda~~---~l~~tGaDgVmIGRgal~ 321 (436)
++.+.++ ..++ +|.. ..+ .++++. -|..-|+..|.++-+.+.
T Consensus 301 ~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~r 357 (435)
T 3lg3_A 301 RFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIH 357 (435)
T ss_dssp HHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHH
T ss_pred HHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHH
Confidence 5555432 3333 4332 233 333332 244458999998866544
No 482
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=89.53 E-value=1.7 Score=43.43 Aligned_cols=116 Identities=16% Similarity=0.243 Sum_probs=81.0
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCC-CCHHHHHHHHHhcCcceeee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNV-RHMEDVQKCLEETGCEGVLS 315 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI-~s~eda~~~l~~tGaDgVmI 315 (436)
+.+.+++-++.|.++|++.|-+.--+ ..+.+.++.|++..++|+++ || +++.-+.++++. |+|.+-|
T Consensus 44 D~~atv~Qi~~l~~aG~diVRvavp~---------~~~a~al~~I~~~~~vPlva--DiHf~~~lal~a~e~-G~dklRI 111 (366)
T 3noy_A 44 DVEATLNQIKRLYEAGCEIVRVAVPH---------KEDVEALEEIVKKSPMPVIA--DIHFAPSYAFLSMEK-GVHGIRI 111 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHCSSCEEE--ECCSCHHHHHHHHHT-TCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC---------hHHHHHHHHHHhcCCCCEEE--eCCCCHHHHHHHHHh-CCCeEEE
Confidence 45677777888999999999774322 12357789999999999875 77 789999999986 9999999
Q ss_pred ehHHhhCCccchhhhhh--hhcc-------CCc-------ccCCCCHHHHHHHHHHHHHHHHhCC
Q 013813 316 AESLLENPALFAGFRTA--EWIV-------GSE-------EISKDGNLDQADLLVEYLKLCEKYP 364 (436)
Q Consensus 316 GRgal~nP~lf~~i~~~--~~~~-------~~~-------~~~~~~~~~~~~~~~~yl~~~~~~~ 364 (436)
-=|-+.+.+-|.++-.. ++.. .|+ ....++.....+-+.+|.+++++++
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 99999988766654210 0000 000 0011344556677888888888765
No 483
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.32 E-value=0.75 Score=44.90 Aligned_cols=88 Identities=19% Similarity=0.289 Sum_probs=56.8
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCc
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGa 310 (436)
.|.+....+++.+.+.|+++|.+.|-|.+...- +..-..+.++.+.+.+ ++|||+.=|=.+.+++.+. .+..||
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L-s~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTV-NEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGC-CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhC-CHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCC
Confidence 366677788999999999999998888764211 1111124445555543 5898744443444444433 234699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 109 davlv~~P~y~~~s 122 (306)
T 1o5k_A 109 NGVLVVTPYYNKPT 122 (306)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988877664
No 484
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=89.26 E-value=0.74 Score=45.79 Aligned_cols=87 Identities=14% Similarity=0.150 Sum_probs=56.4
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGaD 311 (436)
|.+...++++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.+. .+..|||
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~-Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQ-LGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 5566778899999999999999988876421 11111124455555544 5898754443444444443 3346999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+-...+..|.
T Consensus 129 avlv~~P~Y~~~s 141 (343)
T 2v9d_A 129 GIVVINPYYWKVS 141 (343)
T ss_dssp EEEEECCSSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877664
No 485
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=89.25 E-value=2.3 Score=40.98 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=56.5
Q ss_pred HHHH-HHHHHHHcCCCcEEEEecCCCchhhhcCccccccc---CChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHH
Q 013813 169 PEIL-LNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLM---DNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKY 244 (436)
Q Consensus 169 ~e~~-~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll---~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ 244 (436)
.+.. .+|-+++++|+|.|||.. +... =|+... ...+.+.-+++++++ .++||+|-.+- .+.
T Consensus 29 ~~~a~~~a~~m~~~GAdiIDIGg-eSTR------Pga~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~~-------~~V 93 (270)
T 4hb7_A 29 VETAINRVKAMIDEGADIIDVGG-VSTR------PGHEMVTLEEELNRVLPVVEAIVG-FDVKISVDTFR-------SEV 93 (270)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEES-CCCS------TTCCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECSC-------HHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECC-ccCC------CCCCCCchHHHHHHHHHHHHHhhc-CCCeEEEECCC-------HHH
Confidence 3433 444467789999999983 2221 133322 234556677778764 58999998542 245
Q ss_pred HHHHHHcCccEEE-eccCcccccCCCCCccCHHHHHHHHhhCCCcEEE
Q 013813 245 AKMLEDAGCSLLA-VHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLA 291 (436)
Q Consensus 245 ak~le~aG~d~I~-VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVia 291 (436)
++.+.++|++.|. |.+...+ -+++..++ ..++|++.
T Consensus 94 a~~al~aGa~iINDVs~g~~d----------~~m~~~va-~~~~~~vl 130 (270)
T 4hb7_A 94 AEACLKLGVDMINDQWAGLYD----------HRMFQIVA-KYDAEIIL 130 (270)
T ss_dssp HHHHHHHTCCEEEETTTTSSC----------THHHHHHH-HTTCEEEE
T ss_pred HHHHHHhccceeccccccccc----------hhHHHHHH-HcCCCeEE
Confidence 6677778888773 4433222 23333333 35677765
No 486
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=89.22 E-value=3.8 Score=40.87 Aligned_cols=167 Identities=11% Similarity=0.080 Sum_probs=93.2
Q ss_pred CCcEEEccCCCCCcHHHHHHHHHhCCCeEEeCcccchhhccChhhhhhhhhccCCCCCEEEEecCCCHHHHHHHHHHHcC
Q 013813 102 RPKLIVAPMVDNSELPFRMLCRRYGAEAAYTPMLHSRIFTESEKYRNEEFATCKEDRPLFVQFCANDPEILLNAARRVEP 181 (436)
Q Consensus 102 ~~~i~lAPM~gvtd~~fR~l~~~~Ga~l~~Temisa~~l~~~~~~~~~~~~~~~~e~plivQL~g~d~e~~~~AA~~v~~ 181 (436)
++|+++|-=..-.+..+-..+...|.+.+.+.-++.+.-.. +..|-++-+ .
T Consensus 47 ~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~G-------------Np~PR~~~~----------------~ 97 (354)
T 4ef8_A 47 ANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREG-------------NPTPRYQAL----------------P 97 (354)
T ss_dssp SSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCC-------------SCSCCEEEE----------------T
T ss_pred CCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCC-------------CCCCcEEec----------------c
Confidence 67888887777555555455556788877766664433111 122333322 0
Q ss_pred CCcEEEEe-cCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHH---HcCccEEE
Q 013813 182 YCDYVDIN-LGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLE---DAGCSLLA 257 (436)
Q Consensus 182 g~D~IdLN-~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le---~aG~d~I~ 257 (436)
.++ || +|-+.. | .+...+-++.+++..+.||.+-+ .|.+.++..+.++.++ +.|+|+|.
T Consensus 98 --~~~-iN~~G~~n~-------G------~~~~~~~l~~~~~~~~~pvivsI-~G~~~~d~~~~a~~l~~~~~~g~d~ie 160 (354)
T 4ef8_A 98 --LGS-INSMGLPNN-------G------FDFYLAYAAEQHDYGKKPLFLSM-SGLSMRENVEMCKRLAAVATEKGVILE 160 (354)
T ss_dssp --TEE-EECCCCCBC-------C------HHHHHHHHHHTCCTTTCCEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred --hhh-hccCCCCCc-------C------HHHHHHHHHHHhhcCCCcEEEEe-ccCCHHHHHHHHHHHhhhhhcCCCEEE
Confidence 122 34 232221 1 23333333444444578988875 3667888888999988 67999998
Q ss_pred eccCcccccCCCCCccC----HHHHHHHHhhCCCcEEE--ccCCCCHHHHHHH---HHhcC-cceeee
Q 013813 258 VHGRTRDEKDGKKFRAD----WNAIKAVKNALRIPVLA--NGNVRHMEDVQKC---LEETG-CEGVLS 315 (436)
Q Consensus 258 VHgRt~~~~~~~~g~ad----~~~i~~ik~~~~iPVia--nGGI~s~eda~~~---l~~tG-aDgVmI 315 (436)
|.--......+.....+ .++++.+++.+++||++ .=++ +.+++.++ +...| +|+|.+
T Consensus 161 lNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~-d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 161 LNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp EECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCC-SHHHHHHHHHHHHTCTTEEEEEE
T ss_pred EeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCC-CHHHHHHHHHHHHhCCCccEEEE
Confidence 85332111111100112 45667778888899864 3344 45444444 44667 999875
No 487
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.09 E-value=0.71 Score=45.68 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=56.1
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE-EccCCCCHHHHHHH---HHhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL-ANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi-anGGI~s~eda~~~---l~~tGa 310 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++||| +.|+..+ +++.+. .+..|+
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~-Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st-~eai~la~~A~~~Ga 130 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYMY-LTREERRRAIEAAATILRGRRTLMAGIGALRT-DEAVALAKDAEAAGA 130 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSEEEEEECCSSH-HHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH-HHHHHHHHHHHhcCC
Confidence 5566778889999999999999988876421 11111124455555544 58987 5555554 444433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+....+..|.
T Consensus 131 davlv~~P~Y~~~s 144 (332)
T 2r8w_A 131 DALLLAPVSYTPLT 144 (332)
T ss_dssp SEEEECCCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988876665
No 488
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=89.07 E-value=5.1 Score=36.84 Aligned_cols=135 Identities=15% Similarity=0.110 Sum_probs=79.7
Q ss_pred CCEEEEecCCCHHHHHHHHHHHc-CCCcEEEEecCCCchhhhcCcccc---cccCChHHHHHHHHHHhcccCccEEEEe-
Q 013813 158 RPLFVQFCANDPEILLNAARRVE-PYCDYVDINLGCPQRIARRGNYGA---FLMDNLPLVKSLVEKLALNLNVPVSCKI- 232 (436)
Q Consensus 158 ~plivQL~g~d~e~~~~AA~~v~-~g~D~IdLN~GCP~~~~~~~~~Gs---~Ll~~p~~v~eIv~av~~~~~iPVsVKi- 232 (436)
-++.+|...-....+.++.+.++ .|+|+|||...-|... .+.+ ....+++.+.++-+.+.+ .++.++.=.
T Consensus 10 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~ 84 (262)
T 3p6l_A 10 WRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTGV 84 (262)
T ss_dssp EEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred cEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEEec
Confidence 45777776654445667776554 5999999986543210 1111 112245556666555543 355443221
Q ss_pred ccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEc---c-C-CCCHHHHHHHHHh
Q 013813 233 RVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLAN---G-N-VRHMEDVQKCLEE 307 (436)
Q Consensus 233 Rlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVian---G-G-I~s~eda~~~l~~ 307 (436)
-.....+.....++.+...|++.|.+|.. ...|+.+..+.+..++.+..- + - +.+++++.++++.
T Consensus 85 ~~~~~~~~~~~~i~~A~~lGa~~v~~~~~----------~~~~~~l~~~a~~~gv~l~~En~~~~~~~~~~~~~~~ll~~ 154 (262)
T 3p6l_A 85 YVAEKSSDWEKMFKFAKAMDLEFITCEPA----------LSDWDLVEKLSKQYNIKISVHNHPQPSDYWKPENLLKAISG 154 (262)
T ss_dssp ECCSSTTHHHHHHHHHHHTTCSEEEECCC----------GGGHHHHHHHHHHHTCEEEEECCSSSSSSSSHHHHHHHHTT
T ss_pred cCCccHHHHHHHHHHHHHcCCCEEEecCC----------HHHHHHHHHHHHHhCCEEEEEeCCCccccCCHHHHHHHHHh
Confidence 12234456667788888999999999852 234777777776656554321 2 1 2478888888874
No 489
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.06 E-value=0.68 Score=44.98 Aligned_cols=86 Identities=15% Similarity=0.235 Sum_probs=56.1
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE-EccCCCCHHHHHHH---HHhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL-ANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi-anGGI~s~eda~~~---l~~tGa 310 (436)
|.+...++++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++||| +.|+..+ +++.+. .+..|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~-Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESPT-LTEEEHKRVVALVAEQAQGRVPVIAGAGSNNP-VEAVRYAQHAQQAGA 96 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSCBEEECCCSSH-HHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhh-CCHHHHHHHHHHHHHHhCCCCeEEEccCCCCH-HHHHHHHHHHHhcCC
Confidence 5566778899999999999999888876421 11111124445555543 58886 4555544 444433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 97 davlv~~P~y~~~s 110 (297)
T 2rfg_A 97 DAVLCVAGYYNRPS 110 (297)
T ss_dssp SEEEECCCTTTCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999988887665
No 490
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.06 E-value=0.81 Score=44.52 Aligned_cols=88 Identities=17% Similarity=0.254 Sum_probs=58.2
Q ss_pred CChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC---CCcEEEccCCCCHHHHHHHH---HhcC
Q 013813 236 PNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL---RIPVLANGNVRHMEDVQKCL---EETG 309 (436)
Q Consensus 236 ~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~---~iPVianGGI~s~eda~~~l---~~tG 309 (436)
.|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++. +..|
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~-Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~G 103 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESAT-LTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHG 103 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGG-SCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 35667778899999999999999988876421 11111124455555543 58988655544555555433 3469
Q ss_pred cceeeeehHHhhCCc
Q 013813 310 CEGVLSAESLLENPA 324 (436)
Q Consensus 310 aDgVmIGRgal~nP~ 324 (436)
+|+||+-...+..|.
T Consensus 104 adavlv~~P~y~~~s 118 (301)
T 3m5v_A 104 ADGILSVAPYYNKPT 118 (301)
T ss_dssp CSEEEEECCCSSCCC
T ss_pred CCEEEEcCCCCCCCC
Confidence 999999988887775
No 491
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=89.06 E-value=0.81 Score=44.76 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=55.7
Q ss_pred HHHHHHHhccc-CccEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhh--CCCcEE
Q 013813 214 KSLVEKLALNL-NVPVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNA--LRIPVL 290 (436)
Q Consensus 214 ~eIv~av~~~~-~iPVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~--~~iPVi 290 (436)
.+.++++++.. ..++.|-+. +.++ ++.+.++|+|.|-+..-+ .+.++++.+. .++++.
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd---tlde----~~eAl~aGaD~I~LDn~~------------~~~l~~av~~i~~~v~ie 257 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE---TLDQ----LRTALAHGARSVLLDNFT------------LDMMRDAVRVTEGRAVLE 257 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES---SHHH----HHHHHHTTCEEEEEESCC------------HHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC---CHHH----HHHHHHcCCCEEEECCCC------------HHHHHHHHHHhCCCCeEE
Confidence 34555555543 344444432 2333 444556899999886422 2445554443 368999
Q ss_pred EccCCCCHHHHHHHHHhcCcceeeeehHHhhCCc
Q 013813 291 ANGNVRHMEDVQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 291 anGGI~s~eda~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
++|||+ .+.+.++.+ +|+|++.+|.....-|+
T Consensus 258 aSGGI~-~~~i~~~a~-tGVD~isvG~lt~sa~~ 289 (298)
T 3gnn_A 258 VSGGVN-FDTVRAIAE-TGVDRISIGALTKDVRA 289 (298)
T ss_dssp EESSCS-TTTHHHHHH-TTCSEEECGGGGTSCCC
T ss_pred EEcCCC-HHHHHHHHH-cCCCEEEECCeecCCCc
Confidence 999995 678888776 69999999975444443
No 492
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=88.94 E-value=2.4 Score=42.41 Aligned_cols=82 Identities=21% Similarity=0.291 Sum_probs=57.5
Q ss_pred CCCCEEEEecCCC----H-HHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEE
Q 013813 156 EDRPLFVQFCAND----P-EILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSC 230 (436)
Q Consensus 156 ~e~plivQL~g~d----~-e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsV 230 (436)
.+.|+.||=+.+. . ....+..++.++|||.|++-+ |. +...+.+..+++.+++|+++
T Consensus 28 G~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvav--p~----------------~~~a~al~~I~~~~~vPlva 89 (366)
T 3noy_A 28 GDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAV--PH----------------KEDVEALEEIVKKSPMPVIA 89 (366)
T ss_dssp TTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEEC--CS----------------HHHHHHHHHHHHHCSSCEEE
T ss_pred CCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCC--CC----------------hHHHHHHHHHHhcCCCCEEE
Confidence 5789999988764 3 344444456678999999953 42 22356778888889999999
Q ss_pred EeccCCChhhHHHHHHHHHHcCccEEEeccC
Q 013813 231 KIRVFPNLQDTIKYAKMLEDAGCSLLAVHGR 261 (436)
Q Consensus 231 KiRlg~~~~d~~~~ak~le~aG~d~I~VHgR 261 (436)
.|-. +. .+|..+.++|+|.+-+.+.
T Consensus 90 DiHf--~~----~lal~a~e~G~dklRINPG 114 (366)
T 3noy_A 90 DIHF--AP----SYAFLSMEKGVHGIRINPG 114 (366)
T ss_dssp ECCS--CH----HHHHHHHHTTCSEEEECHH
T ss_pred eCCC--CH----HHHHHHHHhCCCeEEECCc
Confidence 9533 33 3455577899999977644
No 493
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.87 E-value=0.62 Score=45.73 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=57.1
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEEEccCCCCHHHHHHH---HHhcCcc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVLANGNVRHMEDVQKC---LEETGCE 311 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVianGGI~s~eda~~~---l~~tGaD 311 (436)
|.+....+++.+.+.|+++|.+-|-|.+... .+..-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .+..|||
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~-Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAY-LSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 5566778899999999999999888776421 11111124455555543 5888765454455555443 3346999
Q ss_pred eeeeehHHhhCCc
Q 013813 312 GVLSAESLLENPA 324 (436)
Q Consensus 312 gVmIGRgal~nP~ 324 (436)
+||+....+..|.
T Consensus 122 avlv~~P~y~~~s 134 (315)
T 3na8_A 122 AVMVLPISYWKLN 134 (315)
T ss_dssp EEEECCCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988877765
No 494
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=88.83 E-value=1.3 Score=43.16 Aligned_cols=71 Identities=21% Similarity=0.196 Sum_probs=41.6
Q ss_pred HHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEeccCCChhhHHHHHHHHHHcCc
Q 013813 174 NAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRVFPNLQDTIKYAKMLEDAGC 253 (436)
Q Consensus 174 ~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRlg~~~~d~~~~ak~le~aG~ 253 (436)
+|.+.+++|+|.||||.-+--+ |.-.-......+.+..+++++++. ++||+|-..- .+.++.+.++|+
T Consensus 57 ~a~~~v~~GAdIIDIGgeSTrP----ga~~v~~~eE~~Rv~pvI~~l~~~-~vpiSIDT~~-------~~Va~aAl~aGa 124 (294)
T 2dqw_A 57 RAREMVAEGADILDLGAESTRP----GAAPVPVEEEKRRLLPVLEAVLSL-GVPVSVDTRK-------PEVAEEALKLGA 124 (294)
T ss_dssp HHHHHHHHTCSEEEEECC---------------CCHHHHHHHHHHHHHTT-CSCEEEECSC-------HHHHHHHHHHTC
T ss_pred HHHHHHHCCCCEEEECCCcCCC----CCCCCCHHHHHHHHHHHHHHHHhC-CCeEEEECCC-------HHHHHHHHHhCC
Confidence 4446678899999999733111 000111233456677788888766 8999998321 234555556688
Q ss_pred cEE
Q 013813 254 SLL 256 (436)
Q Consensus 254 d~I 256 (436)
+.|
T Consensus 125 ~iI 127 (294)
T 2dqw_A 125 HLL 127 (294)
T ss_dssp SEE
T ss_pred CEE
Confidence 765
No 495
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=88.81 E-value=0.85 Score=41.51 Aligned_cols=83 Identities=7% Similarity=0.039 Sum_probs=56.5
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhCCCcEEEccCCCCHHH-HHHHHHhcCcceeee
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNALRIPVLANGNVRHMED-VQKCLEETGCEGVLS 315 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~~iPVianGGI~s~ed-a~~~l~~tGaDgVmI 315 (436)
+..+..+.++.+++.|++++.+-- .+...........+.++++++.++.|+.+-+.|.+.++ ++.+++ .|+|+|.+
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~--~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~-~gad~v~v 90 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDI--MDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQ-AGADIMTI 90 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEE--EBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHH-HTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEe--ecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHH-cCCCEEEE
Confidence 456777888999999999875531 11110000122378899999888899999999998864 544444 59999998
Q ss_pred ehHHhhC
Q 013813 316 AESLLEN 322 (436)
Q Consensus 316 GRgal~n 322 (436)
.-.....
T Consensus 91 h~~~~~~ 97 (220)
T 2fli_A 91 HTESTRH 97 (220)
T ss_dssp EGGGCSC
T ss_pred ccCcccc
Confidence 7554433
No 496
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=88.64 E-value=3.5 Score=38.59 Aligned_cols=119 Identities=14% Similarity=0.060 Sum_probs=77.0
Q ss_pred cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCccEEEEecc-CC----ChhhH---HHHHHHHHHc
Q 013813 180 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNVPVSCKIRV-FP----NLQDT---IKYAKMLEDA 251 (436)
Q Consensus 180 ~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~iPVsVKiRl-g~----~~~d~---~~~ak~le~a 251 (436)
+.|+|-|||+.+-.. | .+--....++.+... .+.+++||.|=||. +. +..+. .+=++.+.++
T Consensus 19 ~~GAdRIELc~~L~~-----G----GlTPS~g~i~~~~~~-~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 19 KAIISRVELCDNLAV-----G----GTTPSYGVIKEANQY-LHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVEL 88 (224)
T ss_dssp TTTCCEEEEEBCGGG-----T----CBCCCHHHHHHHHHH-HHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HcCCCEEEEcCCccc-----C----CcCCCHHHHHHHHHh-hhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Confidence 458999999953211 1 233334445444211 25668999999987 21 22222 3346678899
Q ss_pred CccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccC---C--CCHHHHHHHHHhcCcceee
Q 013813 252 GCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGN---V--RHMEDVQKCLEETGCEGVL 314 (436)
Q Consensus 252 G~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGG---I--~s~eda~~~l~~tGaDgVm 314 (436)
|+|+|.+-.=+.+ |..|.+.++++.+.. +++|..-=- + .++..+.+.|...|++.|.
T Consensus 89 GadGvV~G~Lt~d------g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rIL 151 (224)
T 2bdq_A 89 ESDALVLGILTSN------NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRIL 151 (224)
T ss_dssp TCSEEEECCBCTT------SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEeeECCC------CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEE
Confidence 9999988655544 268999998887654 678776443 3 6777777777667999886
No 497
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=88.59 E-value=7.5 Score=36.05 Aligned_cols=87 Identities=20% Similarity=0.272 Sum_probs=52.0
Q ss_pred CCCEEEEecCCCHHHHHHHHHHHcCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cCccEEEEecc
Q 013813 157 DRPLFVQFCANDPEILLNAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNVPVSCKIRV 234 (436)
Q Consensus 157 e~plivQL~g~d~e~~~~AA~~v~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~iPVsVKiRl 234 (436)
..++++.+=-.+.++..+.++.+.+.++.+.+++ +.- . .+| ++ +++++++. ..+.+.+| +
T Consensus 12 ~~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~--~lf--~--~~G------~~----~v~~l~~~~g~~v~lD~K--l 73 (228)
T 3m47_A 12 MNRLILAMDLMNRDDALRVTGEVREYIDTVKIGY--PLV--L--SEG------MD----IIAEFRKRFGCRIIADFK--V 73 (228)
T ss_dssp GGGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEH--HHH--H--HHC------TH----HHHHHHHHHCCEEEEEEE--E
T ss_pred CCCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcH--HHH--H--hcC------HH----HHHHHHhcCCCeEEEEEe--e
Confidence 3467777655565555555554444578998875 221 1 123 23 33444442 34566666 5
Q ss_pred CCChhh-HHHHHHHHHHcCccEEEeccCc
Q 013813 235 FPNLQD-TIKYAKMLEDAGCSLLAVHGRT 262 (436)
Q Consensus 235 g~~~~d-~~~~ak~le~aG~d~I~VHgRt 262 (436)
. ++.+ ...+++.+.++|+|.++||+-.
T Consensus 74 ~-DipnTv~~~~~~~~~~gad~vtvh~~~ 101 (228)
T 3m47_A 74 A-DIPETNEKICRATFKAGADAIIVHGFP 101 (228)
T ss_dssp C-SCHHHHHHHHHHHHHTTCSEEEEESTT
T ss_pred c-ccHhHHHHHHHHHHhCCCCEEEEeccC
Confidence 5 4443 4557888889999999999753
No 498
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=88.58 E-value=6.6 Score=37.43 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=88.5
Q ss_pred CCCEEEEe------cCCCHHHHHHHH---HHH-cCCCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcccCc
Q 013813 157 DRPLFVQF------CANDPEILLNAA---RRV-EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALNLNV 226 (436)
Q Consensus 157 e~plivQL------~g~d~e~~~~AA---~~v-~~g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~~~i 226 (436)
+.|+.|=| |..+.+++.... +.+ +.|+|+|-+-+--|.. .=|.+.+.+++++.. +.
T Consensus 51 ~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-----------~iD~~~~~~Li~~a~---~~ 116 (256)
T 1twd_A 51 TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG-----------NVDMPRMEKIMAAAG---PL 116 (256)
T ss_dssp CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----------SBCHHHHHHHHHHHT---TS
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-----------CcCHHHHHHHHHHhC---CC
Confidence 45666555 235566666554 333 4599999887654431 136788888887754 56
Q ss_pred cEEEEeccCCChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHHHHHHH
Q 013813 227 PVSCKIRVFPNLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMEDVQKCL 305 (436)
Q Consensus 227 PVsVKiRlg~~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~eda~~~l 305 (436)
+++.= |..+...+..+-.+.+.+.|++.|--+|....- .-..+.++++.+.. ++-|++.|||+. +.+.+++
T Consensus 117 ~vTFH-RAfD~~~d~~~ale~L~~lG~~rILTSG~~~~a------~~g~~~L~~Lv~~a~~i~Im~GgGv~~-~Ni~~l~ 188 (256)
T 1twd_A 117 AVTFH-RAFDMCANPLYTLNNLAELGIARVLTSGQKSDA------LQGLSKIMELIAHRDAPIIMAGAGVRA-ENLHHFL 188 (256)
T ss_dssp EEEEC-GGGGGCSCHHHHHHHHHHHTCCEEEECTTSSST------TTTHHHHHHHHTSSSCCEEEEESSCCT-TTHHHHH
T ss_pred cEEEE-CchhccCCHHHHHHHHHHcCCCEEECCCCCCCH------HHHHHHHHHHHHhhCCcEEEecCCcCH-HHHHHHH
Confidence 76553 443333455666778888999999777654321 22356677776533 677888899974 6677777
Q ss_pred HhcCcceeeee
Q 013813 306 EETGCEGVLSA 316 (436)
Q Consensus 306 ~~tGaDgVmIG 316 (436)
.+|+..+=.+
T Consensus 189 -~tGv~e~H~S 198 (256)
T 1twd_A 189 -DAGVLEVHSS 198 (256)
T ss_dssp -HHTCSEEEEC
T ss_pred -HcCCCeEeEC
Confidence 6899887755
No 499
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=88.39 E-value=8.6 Score=36.08 Aligned_cols=124 Identities=15% Similarity=0.261 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcC-CCcEEEEecCCCchhhhcCcccccccCChHHHHHHHHHHhcc--cCccEEEEeccCCChhhH----
Q 013813 169 PEILLNAARRVEP-YCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLALN--LNVPVSCKIRVFPNLQDT---- 241 (436)
Q Consensus 169 ~e~~~~AA~~v~~-g~D~IdLN~GCP~~~~~~~~~Gs~Ll~~p~~v~eIv~av~~~--~~iPVsVKiRlg~~~~d~---- 241 (436)
++....+++.+.. |+|.|.+| .+|+ ++.+...++...+. .+.|..+-+-...+.++.
T Consensus 72 ~nTv~~~~~~~~~~gad~vTvh-----------~~~G-----~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~ 135 (239)
T 3tr2_A 72 PQTVAGACRAVAELGVWMMNIH-----------ISGG-----RTMMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKT 135 (239)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE-----------GGGC-----HHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHH
T ss_pred chHHHHHHHHHHhCCCCEEEEe-----------ccCC-----HHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHh
Q ss_pred -----------HHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC-CCcEEEccCCCCHHH---------
Q 013813 242 -----------IKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL-RIPVLANGNVRHMED--------- 300 (436)
Q Consensus 242 -----------~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~-~iPVianGGI~s~ed--------- 300 (436)
.++++...++|++++++.+.. +..+++.. .-.++...||+-..+
T Consensus 136 ~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~~e---------------~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~ 200 (239)
T 3tr2_A 136 LGIQEKVPDIVCRMATLAKSAGLDGVVCSAQE---------------AALLRKQFDRNFLLVTPGIRLETDEKGDQKRVM 200 (239)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHTCCEEECCHHH---------------HHHHHTTCCTTSEEEECCBC----------CCB
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCCEEEECchh---------------HHHHHHhcCCCcEEECCCcCCCCCCcCcccccC
Q ss_pred -HHHHHHhcCcceeeeehHHhhCCc
Q 013813 301 -VQKCLEETGCEGVLSAESLLENPA 324 (436)
Q Consensus 301 -a~~~l~~tGaDgVmIGRgal~nP~ 324 (436)
..++++. |+|.+++||+++..++
T Consensus 201 t~~~~~~a-Gad~lVvGr~I~~a~d 224 (239)
T 3tr2_A 201 TPRAAIQA-GSDYLVIGRPITQSTD 224 (239)
T ss_dssp CHHHHHHH-TCSEEEECHHHHTSSS
T ss_pred CHHHHHHc-CCCEEEEChHHhCCCC
No 500
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.32 E-value=0.71 Score=44.68 Aligned_cols=86 Identities=15% Similarity=0.224 Sum_probs=56.1
Q ss_pred ChhhHHHHHHHHHHcCccEEEeccCcccccCCCCCccCHHHHHHHHhhC--CCcEE-EccCCCCHHHHHHH---HHhcCc
Q 013813 237 NLQDTIKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWNAIKAVKNAL--RIPVL-ANGNVRHMEDVQKC---LEETGC 310 (436)
Q Consensus 237 ~~~d~~~~ak~le~aG~d~I~VHgRt~~~~~~~~g~ad~~~i~~ik~~~--~iPVi-anGGI~s~eda~~~---l~~tGa 310 (436)
|.+....+++.+.+.|+++|.+.|-|.+... .+..-..+.++.+.+.+ ++||| +.|+-.+. ++.++ .+..|+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~-Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~-~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPT-LSKSEHEQVVEITIKTANGRVPVIAGAGSNSTA-EAIAFVRHAQNAGA 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGG-SCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHH-HHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhh-CCHHHHHHHHHHHHHHhCCCCcEEEecCCccHH-HHHHHHHHHHHcCC
Confidence 5566778899999999999999888876421 11111124445555543 58886 55555554 44433 344699
Q ss_pred ceeeeehHHhhCCc
Q 013813 311 EGVLSAESLLENPA 324 (436)
Q Consensus 311 DgVmIGRgal~nP~ 324 (436)
|+||+-...+..|.
T Consensus 97 davlv~~P~y~~~s 110 (292)
T 2vc6_A 97 DGVLIVSPYYNKPT 110 (292)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999988876664
Done!