Query 013815
Match_columns 436
No_of_seqs 221 out of 721
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 07:40:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013815.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013815hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.1E-53 2.4E-58 448.8 21.7 293 127-435 153-461 (464)
2 PF03016 Exostosin: Exostosin 100.0 1E-44 2.2E-49 354.8 17.1 242 127-387 49-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 2.3E-24 5E-29 224.1 10.7 237 183-431 263-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.2 2.4E-11 5.2E-16 127.4 9.8 350 33-436 42-414 (691)
5 PF00852 Glyco_transf_10: Glyc 97.1 0.0015 3.2E-08 67.3 8.3 155 225-396 139-306 (349)
6 cd03801 GT1_YqgM_like This fam 97.0 0.0073 1.6E-07 57.4 10.9 95 312-409 266-363 (374)
7 cd03814 GT1_like_2 This family 96.5 0.0072 1.6E-07 58.6 7.6 95 311-408 256-352 (364)
8 PLN02871 UDP-sulfoquinovose:DA 96.5 0.017 3.8E-07 60.8 10.5 96 312-410 322-422 (465)
9 cd03822 GT1_ecORF704_like This 96.3 0.011 2.4E-07 57.4 7.5 94 312-409 258-355 (366)
10 cd03821 GT1_Bme6_like This fam 96.3 0.029 6.3E-07 54.0 10.2 93 312-409 272-367 (375)
11 PF00534 Glycos_transf_1: Glyc 96.3 0.0055 1.2E-07 54.7 4.8 85 312-399 83-169 (172)
12 TIGR03449 mycothiol_MshA UDP-N 96.3 0.033 7.1E-07 56.7 10.9 96 312-410 293-390 (405)
13 cd03820 GT1_amsD_like This fam 96.3 0.012 2.7E-07 55.8 7.2 96 312-409 243-340 (348)
14 cd03818 GT1_ExpC_like This fam 96.2 0.045 9.8E-07 56.0 11.3 95 312-409 291-388 (396)
15 cd03794 GT1_wbuB_like This fam 96.0 0.019 4.1E-07 55.4 7.2 95 312-409 285-387 (394)
16 cd05844 GT1_like_7 Glycosyltra 96.0 0.074 1.6E-06 52.7 11.5 95 312-409 255-358 (367)
17 TIGR03088 stp2 sugar transfera 95.9 0.07 1.5E-06 53.6 11.3 95 312-409 263-360 (374)
18 cd03808 GT1_cap1E_like This fa 95.7 0.035 7.5E-07 53.0 7.5 93 312-407 254-349 (359)
19 cd03819 GT1_WavL_like This fam 95.7 0.035 7.5E-07 54.5 7.5 94 312-408 254-352 (355)
20 PRK15427 colanic acid biosynth 95.7 0.094 2E-06 54.6 11.1 94 312-409 289-393 (406)
21 cd03809 GT1_mtfB_like This fam 95.4 0.031 6.7E-07 54.3 6.3 94 312-410 263-358 (365)
22 cd03804 GT1_wbaZ_like This fam 95.2 0.07 1.5E-06 53.1 8.1 72 312-387 252-323 (351)
23 cd03800 GT1_Sucrose_synthase T 95.2 0.046 9.9E-07 54.6 6.6 95 312-409 293-390 (398)
24 cd04962 GT1_like_5 This family 95.1 0.061 1.3E-06 53.3 7.3 94 313-409 262-358 (371)
25 cd04951 GT1_WbdM_like This fam 95.0 0.21 4.6E-06 48.8 10.8 91 313-408 254-347 (360)
26 PRK10307 putative glycosyl tra 95.0 0.12 2.7E-06 53.0 9.6 96 312-410 294-396 (412)
27 cd03823 GT1_ExpE7_like This fa 94.9 0.078 1.7E-06 51.1 7.1 88 312-402 253-343 (359)
28 cd03806 GT1_ALG11_like This fa 94.9 0.2 4.3E-06 52.4 10.7 94 312-409 315-414 (419)
29 PRK09814 beta-1,6-galactofuran 94.6 0.064 1.4E-06 54.2 5.9 89 312-406 217-316 (333)
30 cd03798 GT1_wlbH_like This fam 94.5 0.057 1.2E-06 51.6 5.1 96 311-409 268-364 (377)
31 cd03807 GT1_WbnK_like This fam 94.4 0.095 2.1E-06 50.2 6.4 93 312-409 259-354 (365)
32 PRK15484 lipopolysaccharide 1, 94.2 0.32 7E-06 49.9 10.2 96 312-410 267-366 (380)
33 cd03805 GT1_ALG2_like This fam 94.2 0.47 1E-05 47.6 11.2 93 313-409 291-386 (392)
34 TIGR02149 glgA_Coryne glycogen 94.2 0.13 2.7E-06 51.7 7.0 95 312-409 271-374 (388)
35 TIGR02095 glgA glycogen/starch 94.0 0.34 7.4E-06 51.1 10.1 93 312-409 356-460 (473)
36 KOG2619 Fucosyltransferase [Ca 93.6 0.39 8.6E-06 50.2 9.5 160 225-397 160-328 (372)
37 cd04955 GT1_like_6 This family 93.5 0.54 1.2E-05 46.1 9.9 92 312-409 258-352 (363)
38 cd03816 GT1_ALG1_like This fam 93.2 0.82 1.8E-05 47.6 11.2 86 312-403 305-399 (415)
39 cd04949 GT1_gtfA_like This fam 93.0 0.22 4.7E-06 49.9 6.4 96 312-409 269-366 (372)
40 PRK00654 glgA glycogen synthas 92.9 0.81 1.8E-05 48.5 10.8 84 314-399 349-442 (466)
41 PRK14098 glycogen synthase; Pr 92.8 0.83 1.8E-05 49.1 10.9 94 312-409 372-473 (489)
42 PF13524 Glyco_trans_1_2: Glyc 92.5 0.29 6.3E-06 39.7 5.5 80 325-408 2-83 (92)
43 PRK09922 UDP-D-galactose:(gluc 92.5 0.58 1.2E-05 47.3 8.7 88 313-402 249-340 (359)
44 cd03802 GT1_AviGT4_like This f 91.8 0.51 1.1E-05 45.8 7.2 71 312-387 234-305 (335)
45 cd03817 GT1_UGDG_like This fam 91.6 0.76 1.6E-05 44.3 8.1 91 312-406 269-361 (374)
46 cd03796 GT1_PIG-A_like This fa 91.5 1.1 2.3E-05 46.0 9.5 94 312-410 260-356 (398)
47 TIGR03087 stp1 sugar transfera 91.5 0.61 1.3E-05 47.8 7.6 91 314-410 290-385 (397)
48 cd03791 GT1_Glycogen_synthase_ 91.1 1.5 3.2E-05 46.0 10.2 86 313-400 362-457 (476)
49 PRK14099 glycogen synthase; Pr 90.8 2 4.4E-05 46.1 11.1 94 313-410 360-467 (485)
50 cd04946 GT1_AmsK_like This fam 90.5 2.7 5.9E-05 43.6 11.4 93 313-408 300-398 (407)
51 cd03795 GT1_like_4 This family 90.3 3 6.4E-05 40.7 10.9 95 312-408 254-353 (357)
52 cd03811 GT1_WabH_like This fam 90.1 1.2 2.6E-05 42.2 7.8 82 313-397 255-341 (353)
53 cd03799 GT1_amsK_like This is 90.0 1.3 2.8E-05 43.2 8.1 95 312-409 246-349 (355)
54 TIGR02472 sucr_P_syn_N sucrose 90.0 0.7 1.5E-05 48.4 6.6 95 313-410 328-429 (439)
55 cd03825 GT1_wcfI_like This fam 90.0 1.5 3.3E-05 42.9 8.6 94 312-408 255-351 (365)
56 KOG1387 Glycosyltransferase [C 89.9 2 4.4E-05 44.9 9.5 89 313-406 348-443 (465)
57 cd03792 GT1_Trehalose_phosphor 89.3 1.4 3E-05 44.5 7.9 94 312-410 264-360 (372)
58 PLN02949 transferase, transfer 86.9 1.7 3.7E-05 46.5 7.2 95 313-410 346-445 (463)
59 cd03813 GT1_like_3 This family 86.8 1.7 3.6E-05 46.2 7.0 94 312-408 361-463 (475)
60 PHA01633 putative glycosyl tra 86.6 1.5 3.3E-05 45.2 6.3 42 312-354 214-255 (335)
61 PHA01630 putative group 1 glyc 85.3 2.1 4.6E-05 43.6 6.6 41 312-353 200-240 (331)
62 PRK15490 Vi polysaccharide bio 84.9 5.9 0.00013 43.9 10.1 64 313-379 464-527 (578)
63 TIGR02468 sucrsPsyn_pln sucros 80.3 4.2 9.1E-05 48.0 7.2 95 313-410 559-659 (1050)
64 cd03793 GT1_Glycogen_synthase_ 79.2 2.5 5.5E-05 46.8 4.7 110 313-423 466-589 (590)
65 PF13692 Glyco_trans_1_4: Glyc 79.1 2.5 5.5E-05 35.9 3.8 69 313-386 62-131 (135)
66 PLN02939 transferase, transfer 78.9 6.2 0.00013 46.2 7.8 91 316-410 851-955 (977)
67 TIGR01133 murG undecaprenyldip 77.8 5 0.00011 39.7 6.0 83 314-401 243-334 (348)
68 smart00672 CAP10 Putative lipo 76.6 25 0.00054 34.9 10.5 143 254-404 78-230 (256)
69 PLN02605 monogalactosyldiacylg 74.3 10 0.00022 38.9 7.4 80 313-402 274-362 (382)
70 cd03812 GT1_CapH_like This fam 69.5 12 0.00026 36.6 6.3 72 312-387 257-328 (358)
71 PRK13608 diacylglycerol glucos 69.1 21 0.00046 36.9 8.4 84 313-405 265-355 (391)
72 cd01635 Glycosyltransferase_GT 67.8 31 0.00067 30.7 8.2 40 313-353 173-212 (229)
73 cd04950 GT1_like_1 Glycosyltra 67.7 7.3 0.00016 39.8 4.6 68 312-386 264-336 (373)
74 PLN00142 sucrose synthase 64.6 17 0.00036 42.1 7.0 93 315-410 659-759 (815)
75 PRK05749 3-deoxy-D-manno-octul 62.3 17 0.00038 37.6 6.2 99 313-423 311-415 (425)
76 cd03788 GT1_TPS Trehalose-6-Ph 61.2 12 0.00025 40.0 4.8 90 311-405 350-445 (460)
77 PLN02316 synthase/transferase 60.8 22 0.00047 42.2 7.2 93 317-411 915-1023(1036)
78 PRK00726 murG undecaprenyldiph 59.5 23 0.0005 35.4 6.4 83 313-400 244-336 (357)
79 COG0438 RfaG Glycosyltransfera 55.6 26 0.00057 32.3 5.6 41 313-354 268-308 (381)
80 PLN02275 transferase, transfer 54.6 52 0.0011 33.6 8.1 75 260-353 261-340 (371)
81 PRK15179 Vi polysaccharide bio 54.4 74 0.0016 36.3 9.8 92 313-409 583-681 (694)
82 TIGR03590 PseG pseudaminic aci 52.7 43 0.00094 33.1 6.9 36 310-351 230-265 (279)
83 PRK10125 putative glycosyl tra 52.4 41 0.00088 35.2 7.0 69 311-383 296-364 (405)
84 TIGR02400 trehalose_OtsA alpha 52.3 39 0.00084 36.2 6.9 85 312-402 346-437 (456)
85 cd03785 GT1_MurG MurG is an N- 50.1 27 0.00059 34.5 5.1 84 313-402 244-338 (350)
86 TIGR02918 accessory Sec system 50.1 56 0.0012 35.5 7.8 95 312-408 383-486 (500)
87 TIGR02470 sucr_synth sucrose s 49.9 44 0.00096 38.6 7.2 93 316-411 637-737 (784)
88 PRK13609 diacylglycerol glucos 47.9 62 0.0013 32.8 7.4 80 314-402 266-352 (380)
89 PRK14762 membrane protein; Pro 47.9 13 0.00028 24.4 1.5 15 14-28 2-16 (27)
90 TIGR00236 wecB UDP-N-acetylglu 47.1 2.1E+02 0.0046 28.7 11.1 94 312-425 265-361 (365)
91 TIGR00867 deg-1 degenerin. Thi 41.1 30 0.00066 38.6 4.1 71 13-85 21-108 (601)
92 PF10617 DUF2474: Protein of u 38.4 24 0.00052 25.6 1.9 17 14-30 6-22 (40)
93 PRK00025 lpxB lipid-A-disaccha 35.1 47 0.001 33.5 4.1 86 313-405 253-358 (380)
94 PF00858 ASC: Amiloride-sensit 31.9 19 0.00042 36.8 0.7 43 14-57 22-72 (439)
95 KOG3185 Translation initiation 29.7 46 0.00099 32.2 2.7 32 321-352 20-51 (245)
96 PLN03063 alpha,alpha-trehalose 27.2 1.4E+02 0.0031 34.5 6.7 90 312-405 366-461 (797)
97 PF05686 Glyco_transf_90: Glyc 26.6 2.5E+02 0.0055 29.6 8.0 139 253-401 151-296 (395)
98 PF15582 Imm40: Immunity prote 25.5 76 0.0016 32.2 3.5 63 313-397 260-323 (327)
99 PLN02501 digalactosyldiacylgly 23.7 2.3E+02 0.0049 32.9 7.2 38 316-354 613-650 (794)
100 PLN02846 digalactosyldiacylgly 23.6 2.9E+02 0.0064 29.9 7.9 37 317-354 296-332 (462)
101 COG0707 MurG UDP-N-acetylgluco 23.2 4.6E+02 0.01 27.3 9.0 83 312-402 243-338 (357)
102 smart00436 TOP1Bc Bacterial DN 22.5 41 0.00089 28.2 0.9 32 15-54 37-68 (89)
103 COG0297 GlgA Glycogen synthase 22.0 98 0.0021 33.8 3.9 43 311-353 358-400 (487)
104 TIGR02002 PTS-II-BC-glcB PTS s 21.1 99 0.0021 33.8 3.7 64 16-90 381-444 (502)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.1e-53 Score=448.80 Aligned_cols=293 Identities=39% Similarity=0.657 Sum_probs=241.0
Q ss_pred cCCccccCccCCCCccccCCCcccc-cccccccCCCCCCCchhHHHHHHHHHHHHHhcCCcccCCCCCCeEEEecCCCCc
Q 013815 127 NKNSTVDTVQNAGNVPGPEKGRESE-QSFIQRNDIMGGDSGGNLIQYLRNYVNLISAKHNFWNRTEGADHFLVACHDWAP 205 (436)
Q Consensus 127 ~~~~~v~dp~~A~lfyvPfy~~~~~-~~~~~~~~~~~~~~~~~L~~~l~~~v~~L~~~~PyWnRsgGrDHflV~~~D~g~ 205 (436)
+.-.||.||.+||+||||||+..+. ++.++.+.. ....+.+.++++|.-+.++||||||++|+|||||++|||+.
T Consensus 153 ~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~ 228 (464)
T KOG1021|consen 153 ESAFRTLDPLEADAFYVPFYASLDYNRALLWPDER----VNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGD 228 (464)
T ss_pred cCceecCChhhCcEEEEcceeeEehhhhcccCCcc----cchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchh
Confidence 3345999999999999999997766 444544321 23445566667777777799999999999999999999987
Q ss_pred hHH---HHHHhhheeehcc-CCCCCCceeC-cceecCCCccCCCCCCccc-----cCCCCCCCCceEEEeecc-CCCCch
Q 013815 206 AET---RIIMANCIRALCN-SDVKEGFVFG-KDVALPETYVLSPQNPLRA-----IGGKPASQRSILAFFAGR-MHGYLR 274 (436)
Q Consensus 206 ~~~---~~~~~n~i~lL~~-~~~~~~~rp~-kDVvIP~~~~~t~~~P~s~-----~~~~~~~~R~~L~fFaG~-~~G~iR 274 (436)
... +....+.++.+++ +.....+.++ +|++|||+. .+||... .+..+..+|++|+||+|+ .+|.+|
T Consensus 229 ~~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~---~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~iR 305 (464)
T KOG1021|consen 229 FRRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPT---IPHPLSPPENSWQGGVPFSNRPILAFFAGAPAGGQIR 305 (464)
T ss_pred eeeccchhhHHHHHHhhCCcceeecccccCCCcccCCCcc---CcCccCccccccccCCCCCCCceEEEEeccccCCcHH
Confidence 654 2333444555666 4556778888 999999984 4454433 235666899999999999 789999
Q ss_pred HHHHhHhhcCCCCcEEEecccCCcCCCCCCCCcccCCchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 275 PILLHHWENKDPDMKIFGQMPMVKGKGKGKGKGKRKGKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 275 ~~L~~~~~~~~~~~~i~~~c~~~~g~~~c~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
+.|+++|++ +++......|+.+ ...++++..|.+.|++|+|||||+||+++|.|+||||.+|||||||+|+
T Consensus 306 ~~L~~~~~~-~~~~~~~~~~~~g--------~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~ 376 (464)
T KOG1021|consen 306 SILLDLWKK-DPDTEVFVNCPRG--------KVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG 376 (464)
T ss_pred HHHHHHhhc-CcCccccccCCCC--------ccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence 999999998 5555444555532 1224778999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcEEEEEcCCChhhH-HHHHhcCCHHHHHHHHHHHHh-hhheeeecC--CCCCccHHHHHHHHHHHHhh
Q 013815 355 FVPPFFEILNWESFAVFVLEKDIPNL-KNILLSISEKRYRRMQMRVKK-VQQHFLWHP--QPVKYDIFHMLLHSIWYNRV 430 (436)
Q Consensus 355 ~~LPFe~~iDw~~fsV~Ipe~dv~~l-~~iL~~Is~e~i~~Mr~~l~~-v~~~f~y~~--~~~~~DAFd~~l~~l~~rR~ 430 (436)
+.+||++++||++|||+|++++++++ .++|.+|+.+++.+||+++++ +.++|.+.. +...+|||+++++++|+|++
T Consensus 377 ~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~ 456 (464)
T KOG1021|consen 377 IQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLH 456 (464)
T ss_pred cccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccc
Confidence 99999999999999999999999988 999999999999999999995 899999998 77789999999999999988
Q ss_pred hhccc
Q 013815 431 FLARA 435 (436)
Q Consensus 431 ~~~~~ 435 (436)
..+.+
T Consensus 457 ~~~~~ 461 (464)
T KOG1021|consen 457 KLRSR 461 (464)
T ss_pred ccccc
Confidence 76643
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=1e-44 Score=354.76 Aligned_cols=242 Identities=31% Similarity=0.479 Sum_probs=179.3
Q ss_pred cCCccccCccCCCCccccCCCcccccccccccCCCCCCCchhHHHHHHHHHHHHHhcCCcccCCCCCCeEEEecCCCCch
Q 013815 127 NKNSTVDTVQNAGNVPGPEKGRESEQSFIQRNDIMGGDSGGNLIQYLRNYVNLISAKHNFWNRTEGADHFLVACHDWAPA 206 (436)
Q Consensus 127 ~~~~~v~dp~~A~lfyvPfy~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~v~~L~~~~PyWnRsgGrDHflV~~~D~g~~ 206 (436)
+.-++|.||++||+||||+|...... ..+. ..........+..++..+.+++|||||++|+||||+.+||||.+
T Consensus 49 ~s~~~T~dp~eAdlF~vP~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~ 122 (302)
T PF03016_consen 49 NSPFRTDDPEEADLFFVPFYSSCYFH-HWWG-----SPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGC 122 (302)
T ss_pred hCCcEeCCHHHCeEEEEEcccccccc-cccC-----CccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccc
Confidence 34479999999999999998755421 1111 01112223334466667777899999999999999999997766
Q ss_pred HHH---HHHhhheeeh-ccCCC-CCCceeCcceecCCCccCCCCCCccccCCCCCCCCceEEEeeccCCC-------Cch
Q 013815 207 ETR---IIMANCIRAL-CNSDV-KEGFVFGKDVALPETYVLSPQNPLRAIGGKPASQRSILAFFAGRMHG-------YLR 274 (436)
Q Consensus 207 ~~~---~~~~n~i~lL-~~~~~-~~~~rp~kDVvIP~~~~~t~~~P~s~~~~~~~~~R~~L~fFaG~~~G-------~iR 274 (436)
... ..+.+.+.++ .+..+ ..+|+|++||++|+.............+..+..+|++|++|+|.+.+ .+|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r 202 (302)
T PF03016_consen 123 SFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVR 202 (302)
T ss_pred cccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhh
Confidence 432 2333333333 23332 56899999999998633222111111234567899999999999752 589
Q ss_pred HHHHhHhhcCCCCcEEEecccCCcCCCCCCCCcccCCchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 275 PILLHHWENKDPDMKIFGQMPMVKGKGKGKGKGKRKGKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 275 ~~L~~~~~~~~~~~~i~~~c~~~~g~~~c~g~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
..|++.|++. ++..+... .....++.+|.+.|++|+|||||+|+++++.||+|||.+|||||||+|+
T Consensus 203 ~~l~~~~~~~-~~~~~~~~------------~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~ 269 (302)
T PF03016_consen 203 QRLLDECKSD-PDFRCSDG------------SETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDD 269 (302)
T ss_pred hHHHHhcccC-Ccceeeec------------ccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCc
Confidence 9999999774 44443210 0112356779999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 355 FVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 355 ~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
++|||+++|||++|||+|+++++++|+++|++|
T Consensus 270 ~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i 302 (302)
T PF03016_consen 270 YVLPFEDVLDWSRFSVRVPEADLPELPEILRSI 302 (302)
T ss_pred ccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-24 Score=224.10 Aligned_cols=237 Identities=17% Similarity=0.243 Sum_probs=171.0
Q ss_pred cCCcccCCCCCCeEEEecCCCCchHHHHHHhh--heee-hccCCC-CCCceeCcceecCCCccCCCCCCccccCCCCCCC
Q 013815 183 KHNFWNRTEGADHFLVACHDWAPAETRIIMAN--CIRA-LCNSDV-KEGFVFGKDVALPETYVLSPQNPLRAIGGKPASQ 258 (436)
Q Consensus 183 ~~PyWnRsgGrDHflV~~~D~g~~~~~~~~~n--~i~l-L~~~~~-~~~~rp~kDVvIP~~~~~t~~~P~s~~~~~~~~~ 258 (436)
..||| |++|+||+++...-- ..+++.+.| ..++ ++.+.+ ...+||+.|++||+...+..-.-..++....+.+
T Consensus 263 slp~w-~~dg~Nhvl~Nl~r~--s~~~n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~ 339 (907)
T KOG2264|consen 263 SLPHW-RTDGFNHVLFNLGRP--SDTQNLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPVNHIAVEKNFVELTPLVPFQ 339 (907)
T ss_pred cCccc-cCCCcceEEEEccCc--cccccceeEeccCceEEEeecceeeeeccCCCcccCcccccccCccceecCcccchh
Confidence 68999 899999999984322 112222222 2232 344554 4589999999998753322211122344566789
Q ss_pred CceEEEeeccCCC------CchHHHHhHhhcC------CCCcEEE---ecccCCcCCCCCC--CCcccCCchhHHHhhcc
Q 013815 259 RSILAFFAGRMHG------YLRPILLHHWENK------DPDMKIF---GQMPMVKGKGKGK--GKGKRKGKMDYIQHMKS 321 (436)
Q Consensus 259 R~~L~fFaG~~~G------~iR~~L~~~~~~~------~~~~~i~---~~c~~~~g~~~c~--g~~~~~~~~~y~~~m~~ 321 (436)
|+||++|+|.+.. ..+.-..++..+- +..+..+ -.|.+ ..+|+ +|..|+....-.+++..
T Consensus 340 RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~---Qe~~SLpewalcg~~~~RrqLlk~ 416 (907)
T KOG2264|consen 340 RKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKN---QENCSLPEWALCGERERRRQLLKS 416 (907)
T ss_pred hheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEeecccc---CCCCCcchhhhccchHHHHHHhcc
Confidence 9999999998752 1333222222211 1112222 23433 34564 67777888899999999
Q ss_pred ccEEEe-eCCCCC-----CchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHH
Q 013815 322 SKYCIC-AKGYEV-----NSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSISEKRYRRM 395 (436)
Q Consensus 322 S~FCL~-P~Gd~~-----~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~Is~e~i~~M 395 (436)
|+|||. |+||+- .-.|++||+..||||||+++...|||++.|||.+.++++|..++++++.+|+++.+.++.+|
T Consensus 417 STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE~HFllrs~~dsDll~m 496 (907)
T KOG2264|consen 417 STFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTEAHFLLRSFEDSDLLEM 496 (907)
T ss_pred ceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhhhCCccccchHHHHHHhcchhhHHHH
Confidence 999996 788853 24799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhheeeecCCCCCcc-HHHHHHHHHHHHhhh
Q 013815 396 QMRVKKVQQHFLWHPQPVKYD-IFHMLLHSIWYNRVF 431 (436)
Q Consensus 396 r~~l~~v~~~f~y~~~~~~~D-AFd~~l~~l~~rR~~ 431 (436)
|| +.+++|.++.+..+ .+++++..| +.|+-
T Consensus 497 RR-----qGRl~wEtYls~~~~~~~tvlA~l-R~rlq 527 (907)
T KOG2264|consen 497 RR-----QGRLFWETYLSDRHLLARTVLAAL-RYRLQ 527 (907)
T ss_pred Hh-----hhhhhHHHHhhHHHHHHHHHHHHH-HHhhC
Confidence 99 66888999887777 677888755 77764
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.24 E-value=2.4e-11 Score=127.41 Aligned_cols=350 Identities=15% Similarity=0.083 Sum_probs=203.7
Q ss_pred cccCccchhhhhccCCCCCCCCccccccccCCcchHHHHHHhhhcCCCCCCCCc---------ccccccccccccccccc
Q 013815 33 FELPYDHVLSSVFSTGKVPAPAVENNSLVTGGLESKSEIASDAVNGLNSTGTHN---------VHEMANDTRTSKAEDAN 103 (436)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 103 (436)
+-.+|+..-.++|--||-- .+|++-+. |-+.+++-.||+-+ +-..-|++|.---
T Consensus 42 ~~w~~s~sp~~~~~~ekR~----------i~d~~~v~---~pa~~p~~e~g~~sc~~~dcf~~y~c~~~~~KvyIy---- 104 (691)
T KOG1022|consen 42 IGWFYSDSPFSLKPIEKRN----------ISDAWPVT---NPAITPASETGLPSCFLADCFLYYQCLFFETKVYIY---- 104 (691)
T ss_pred eeeecCCCCcCCCcccccc----------cccCcccc---ccccCcccccCCccceehhhhhhhhccccccceeEE----
Confidence 3457777777777666532 22333222 22455666666333 3334566663211
Q ss_pred cccccCCCcccccCCccccccc------ccCCccccCccCCCCccccCCCcccccccccccCCCCCCCchhHHHHHHHHH
Q 013815 104 LQADFDDGEDIHEEPTNEKLEG------LNKNSTVDTVQNAGNVPGPEKGRESEQSFIQRNDIMGGDSGGNLIQYLRNYV 177 (436)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~dp~~A~lfyvPfy~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~v 177 (436)
.+.+|-+.+-|-++-++..+-. -.++.-|.|++.|=+| +|-.-. ++.| -|.-.++
T Consensus 105 ~l~~~vd~~s~~~~~T~s~ey~~lleA~~~S~yyt~n~N~aclf-~Ps~d~------lnQn---------~l~~kl~--- 165 (691)
T KOG1022|consen 105 MLGDIVDAKSIDKGATWSPEYIALLEAWHLSFYYTFNYNGACLF-MPSSDE------LNQN---------PLSWKLE--- 165 (691)
T ss_pred ehhhhhhhhcccccccccHHHHHHHHHHHhccceecCCCceEEE-ecchhh------hccC---------cchHHHH---
Confidence 1223333344444555433322 2455567777776543 443211 1111 1222122
Q ss_pred HHHHhcCCcccCCCCCCeEEEe-----cCC-CCchHHHHHHhhheeehccCCCC-CCceeCcceecCCCccCCCCCCccc
Q 013815 178 NLISAKHNFWNRTEGADHFLVA-----CHD-WAPAETRIIMANCIRALCNSDVK-EGFVFGKDVALPETYVLSPQNPLRA 250 (436)
Q Consensus 178 ~~L~~~~PyWnRsgGrDHflV~-----~~D-~g~~~~~~~~~n~i~lL~~~~~~-~~~rp~kDVvIP~~~~~t~~~P~s~ 250 (436)
....++.-.|+ -|.+|..+. .++ ++...... -+++ +....+. -.|++++||.||..+....-
T Consensus 166 ~~ala~l~~wd--rg~nH~~fnmLpGg~p~yntaldv~~--d~a~--~~gggf~tW~yr~g~dv~ipv~Sp~~v~----- 234 (691)
T KOG1022|consen 166 KVALAKLLVWD--RGVNHEGFNMLPGGDPTYNTALDVGQ--DEAW--YSGGGFGTWKYRKGNDVYIPVRSPGNVG----- 234 (691)
T ss_pred HHHHhcccchh--cccceeeEeeccCCCCCccccccCCc--ceeE--EecCCcCcccccCCCccccccccccccC-----
Confidence 23344667897 689999886 122 11100000 0011 1122232 25899999999986322110
Q ss_pred cCCCCCCCCceEEEeeccCC-CCchHHHHhHhhcCCCCcEEEecccCCcCCCCCCCCcccCCchhHHHhhccccEEEeeC
Q 013815 251 IGGKPASQRSILAFFAGRMH-GYLRPILLHHWENKDPDMKIFGQMPMVKGKGKGKGKGKRKGKMDYIQHMKSSKYCICAK 329 (436)
Q Consensus 251 ~~~~~~~~R~~L~fFaG~~~-G~iR~~L~~~~~~~~~~~~i~~~c~~~~g~~~c~g~~~~~~~~~y~~~m~~S~FCL~P~ 329 (436)
....-+.+|.+++-=.|--. ..+|..+.+.....+......+.|.+.. .+.-+-+-.+...+|...+...+||+.-+
T Consensus 235 ~~~~~~g~r~~~l~~~q~n~~pr~r~~l~el~~kh~e~~l~l~~c~nls--l~~r~~~qhH~~~~yp~~l~~~~fc~~~R 312 (691)
T KOG1022|consen 235 RAFLYDGSRYRVLQDCQENYGPRIRVSLIELLSKHEERELELPFCLNLS--LNSRGVRQHHFDVKYPSSLEFIGFCDGDR 312 (691)
T ss_pred ccccCCccceeeeeccccccchHhHHhHHHHHhhccceEEecchhcccc--ccccchhhcccccccccccceeeeEeccc
Confidence 01122344555444443322 3488888877655444555556665431 11112222355678999999999999998
Q ss_pred CCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCCHHHHHHHHHHHHhhhheeeec
Q 013815 330 GYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSISEKRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 330 Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~Is~e~i~~Mr~~l~~v~~~f~y~ 409 (436)
+.+-...-+.+-+.+||+|||..|.+.+||++++||...||+++|..+..+...|++++...+-+||.+.. ..+.
T Consensus 313 ~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~aSv~~~e~~~~~v~~~l~~i~~~~i~sl~~r~~-----~~rl 387 (691)
T KOG1022|consen 313 VTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIVASVWCMEYYAGKVMDALLNIETAGICSLQLRRI-----GSRL 387 (691)
T ss_pred cccCCccceehhhhcccceeeeeehhhhhhhhhhhceeeeEEeehhhHHHHHHHhhcchhcchhhhhhhhh-----hhhH
Confidence 88877888999999999999999999999999999999999999999999999999999999999988443 2232
Q ss_pred CCCCCccHHHHHHHHHHHHhhhhcccC
Q 013815 410 PQPVKYDIFHMLLHSIWYNRVFLARAR 436 (436)
Q Consensus 410 ~~~~~~DAFd~~l~~l~~rR~~~~~~~ 436 (436)
......-+.-.++-+.+..|+.++.+|
T Consensus 388 ~rf~~~~~~~l~~~~~i~~~llp~v~~ 414 (691)
T KOG1022|consen 388 NRFPPFKRGFLLLLSSIGKRLLPVVAI 414 (691)
T ss_pred hhcchHHHHHHHHHHHHhhhhhheeee
Confidence 333333333333334557888776553
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=97.13 E-value=0.0015 Score=67.27 Aligned_cols=155 Identities=12% Similarity=0.181 Sum_probs=70.3
Q ss_pred CCCceeCcceecCCCccCCCCCCccc-cCCCCCCCC-ceEEEeeccCCC-CchHHHHhHhhcCCCCcEEEecccCCcCCC
Q 013815 225 KEGFVFGKDVALPETYVLSPQNPLRA-IGGKPASQR-SILAFFAGRMHG-YLRPILLHHWENKDPDMKIFGQMPMVKGKG 301 (436)
Q Consensus 225 ~~~~rp~kDVvIP~~~~~t~~~P~s~-~~~~~~~~R-~~L~fFaG~~~G-~iR~~L~~~~~~~~~~~~i~~~c~~~~g~~ 301 (436)
.-.|+...||.+||.+.......... ........+ +..++++..+.. ..|..+++.+... -.+...|.|...
T Consensus 139 TMTYr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~~L~~~-~~vd~yG~c~~~---- 213 (349)
T PF00852_consen 139 TMTYRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCNPHSGREEYVRELSKY-IPVDSYGKCGNN---- 213 (349)
T ss_dssp ----------------------------------TSSEEEEE--S-S--H-HHHHHHHHHHTT-S-EEE-SSTT------
T ss_pred ccccccccccccccccccccccccccccccccccCCCceEEEEeeCcCCcccHHHHHHHHHhh-cCeEccCCCCCC----
Confidence 34678889999998643211111100 011122333 455555665542 3588888888765 467777877211
Q ss_pred CCCCCcccCCchhHHHhhccccEEEeeC---CCCCCchhHHHHHhcCceeEEec--C-Cc--cCCCCCCCCCCcEEEEEc
Q 013815 302 KGKGKGKRKGKMDYIQHMKSSKYCICAK---GYEVNSPRVVEAIFYECVPVIIS--D-NF--VPPFFEILNWESFAVFVL 373 (436)
Q Consensus 302 ~c~g~~~~~~~~~y~~~m~~S~FCL~P~---Gd~~~s~Rl~dAi~~GCIPViis--d-~~--~LPFe~~iDw~~fsV~Ip 373 (436)
.........+.+++-||.|+.- ..+.-+--+|+|+.+|||||+++ . ++ .+|=...|+.++|
T Consensus 214 ------~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df----- 282 (349)
T PF00852_consen 214 ------NPCPRDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDF----- 282 (349)
T ss_dssp ------SSS--S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGS-----
T ss_pred ------CCcccccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcC-----
Confidence 0112234889999999999864 44666899999999999999999 3 22 3665777776655
Q ss_pred CCChhhHHHHHhcC--CHHHHHHHH
Q 013815 374 EKDIPNLKNILLSI--SEKRYRRMQ 396 (436)
Q Consensus 374 e~dv~~l~~iL~~I--s~e~i~~Mr 396 (436)
+.+.+|.+.|..+ .++.+.+.-
T Consensus 283 -~s~~~La~yl~~l~~n~~~Y~~yf 306 (349)
T PF00852_consen 283 -KSPKELADYLKYLDKNDELYNKYF 306 (349)
T ss_dssp -SSHHHHHHHHHHHHT-HHHHH---
T ss_pred -CCHHHHHHHHHHHhcCHHHHhhhc
Confidence 2456788888777 355555443
No 6
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=96.97 E-value=0.0073 Score=57.38 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=70.1
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..++.+.|..|++.++|.-....+..++||+.+|| |||.++. -.+.+.+......+.++..+..++.+.|..+ .+
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP 342 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh
Confidence 47789999999999999866666788999999998 6666664 2344555556778888888877777777664 46
Q ss_pred HHHHHHHHHHH-hhhheeeec
Q 013815 390 KRYRRMQMRVK-KVQQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~-~v~~~f~y~ 409 (436)
+...+|.++.+ .+...+.|+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 343 ELRRRLGEAARERVAERFSWD 363 (374)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 77788888776 455555443
No 7
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.55 E-value=0.0072 Score=58.58 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=68.5
Q ss_pred CchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 013815 311 GKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--S 388 (436)
Q Consensus 311 ~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s 388 (436)
...+..+.|..|..|+.|.........++|||.+|| |||.++.-- ..+.+.=....+.++..+...+.+.+..+ .
T Consensus 256 ~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~ 332 (364)
T cd03814 256 DGEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLAD 332 (364)
T ss_pred CHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHcC
Confidence 346788899999999999887767889999999999 788777432 23344434566777777776555555443 5
Q ss_pred HHHHHHHHHHHHhhhheeee
Q 013815 389 EKRYRRMQMRVKKVQQHFLW 408 (436)
Q Consensus 389 ~e~i~~Mr~~l~~v~~~f~y 408 (436)
++...+|.++..+....+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 333 PELRRRMAARARAEAERRSW 352 (364)
T ss_pred HHHHHHHHHHHHHHHhhcCH
Confidence 78888888887776555544
No 8
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=96.48 E-value=0.017 Score=60.81 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=72.6
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCC---CcEEEEEcCCChhhHHHHHhcC-
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNW---ESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw---~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
..+..+.|..+..++.|......+.-++|||.+| +|||.++.-- ..++++- ..-.+.++..+...+.+.|..+
T Consensus 322 ~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 322 GDELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred HHHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3678899999999999987766678899999999 8999887432 2344433 6677888888887766665554
Q ss_pred -CHHHHHHHHHHHHhhhheeeecC
Q 013815 388 -SEKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 388 -s~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
.++...+|.++.++....|.|..
T Consensus 399 ~~~~~~~~~~~~a~~~~~~fsw~~ 422 (465)
T PLN02871 399 ADPELRERMGAAAREEVEKWDWRA 422 (465)
T ss_pred hCHHHHHHHHHHHHHHHHhCCHHH
Confidence 57788889988887766666654
No 9
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.34 E-value=0.011 Score=57.41 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=68.8
Q ss_pred chhHHHhhccccEEEeeCCCC--CCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--
Q 013815 312 KMDYIQHMKSSKYCICAKGYE--VNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI-- 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~--~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I-- 387 (436)
..++.+.|..+.+++.|.... ..+..+.|||.+|| |||.++.-- .+.+.+ ..-.+.++..++..+.+.|..+
T Consensus 258 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~-~~~g~~~~~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 258 DEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLD-GGTGLLVPPGDPAALAEAIRRLLA 333 (366)
T ss_pred HHHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeee-CCCcEEEcCCCHHHHHHHHHHHHc
Confidence 467889999999999998776 67788999999999 999887433 333333 3445667777777666666553
Q ss_pred CHHHHHHHHHHHHhhhheeeec
Q 013815 388 SEKRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 388 s~e~i~~Mr~~l~~v~~~f~y~ 409 (436)
.++...+|+++.++..+.+.|+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 334 DPELAQALRARAREYARAMSWE 355 (366)
T ss_pred ChHHHHHHHHHHHHHHhhCCHH
Confidence 3578888998888776665554
No 10
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=96.32 E-value=0.029 Score=54.02 Aligned_cols=93 Identities=17% Similarity=0.263 Sum_probs=60.7
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.+..++++++|.-....+..++|||.+|| |||.++.-- ..+.+.- ...+.++.+ ...+.+.+..+ .+
T Consensus 272 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~~~ 346 (375)
T cd03821 272 GEDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDD-VDALAAALRRALELP 346 (375)
T ss_pred hHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCC-hHHHHHHHHHHHhCH
Confidence 35678889999999999876666788999999997 777776432 2233322 444445443 24444444333 34
Q ss_pred HHHHHHHHHHHhh-hheeeec
Q 013815 390 KRYRRMQMRVKKV-QQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v-~~~f~y~ 409 (436)
+...+|.++.++. ..+|.|.
T Consensus 347 ~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 347 QRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 7788888877765 6666554
No 11
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.32 E-value=0.0055 Score=54.66 Aligned_cols=85 Identities=21% Similarity=0.188 Sum_probs=56.1
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCC--H
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSIS--E 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~Is--~ 389 (436)
..++.+.+..|.+.++|......+..+.|||.+|| |||.++. -.+.+++.=..-.+.++..++.++.+.+..+- +
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~--~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDI--GGNNEIINDGVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESS--THHHHHSGTTTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccc--cCCceeeccccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 45788999999999999988888999999999999 6666662 12223332222456677778877777776653 3
Q ss_pred HHHHHHHHHH
Q 013815 390 KRYRRMQMRV 399 (436)
Q Consensus 390 e~i~~Mr~~l 399 (436)
+...+|.++.
T Consensus 160 ~~~~~l~~~~ 169 (172)
T PF00534_consen 160 ELRQKLGKNA 169 (172)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4455555544
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.28 E-value=0.033 Score=56.69 Aligned_cols=96 Identities=13% Similarity=0.084 Sum_probs=67.4
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.|..+..|+.|.=.......+.|||.+|| |||.++.-- ..+.+.=....+.++..+...+.+.+..+ .+
T Consensus 293 ~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~ 369 (405)
T TIGR03449 293 PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG--LPVAVADGETGLLVDGHDPADWADALARLLDDP 369 (405)
T ss_pred HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC--cHhhhccCCceEECCCCCHHHHHHHHHHHHhCH
Confidence 46778899999999998655555678999999997 888877422 22344434556777877877665555443 46
Q ss_pred HHHHHHHHHHHhhhheeeecC
Q 013815 390 KRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
+...+|+++.++..++|.|+.
T Consensus 370 ~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 370 RTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 777888888877666666554
No 13
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=96.27 E-value=0.012 Score=55.83 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=68.6
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.|.++.+++.|.........++|||.+||.+| .++....+ +++++-....+.++..++.++.+.+..+ .+
T Consensus 243 ~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 243 TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVI-SFDCPTGP-SEIIEDGVNGLLVPNGDVEALAEALLRLMEDE 320 (348)
T ss_pred cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEE-EecCCCch-HhhhccCcceEEeCCCCHHHHHHHHHHHHcCH
Confidence 36788999999999999866556788999999999655 45432222 2233434567778888877666666665 57
Q ss_pred HHHHHHHHHHHhhhheeeec
Q 013815 390 KRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y~ 409 (436)
+...+|.++.++..+.|-|.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 321 ELRKRMGANARESAERFSIE 340 (348)
T ss_pred HHHHHHHHHHHHHHHHhCHH
Confidence 88888998887777776554
No 14
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.17 E-value=0.045 Score=55.99 Aligned_cols=95 Identities=19% Similarity=0.162 Sum_probs=66.5
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..++.+.|..|..++.|.-....+..++|||++|| |||.++.- +..+++.-..-.+.++..+...+.+.+..+ .+
T Consensus 291 ~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~ 367 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVITDGENGLLVDFFDPDALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--CchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH
Confidence 35678889999999988655545668999999999 88877742 445666555667788888877655555443 46
Q ss_pred HHHHHHHHHHHhhh-heeeec
Q 013815 390 KRYRRMQMRVKKVQ-QHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~-~~f~y~ 409 (436)
+...+|.++.++.. .+|.|.
T Consensus 368 ~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 368 ARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred HHHHHHHHHHHHHHHHhccHH
Confidence 67788888777543 446553
No 15
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=96.01 E-value=0.019 Score=55.43 Aligned_cols=95 Identities=13% Similarity=0.112 Sum_probs=66.5
Q ss_pred chhHHHhhccccEEEeeCCCCCC-----chhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVN-----SPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS 386 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~-----s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~ 386 (436)
..++.+.|..++++++|...+.. ...+.||+.+|| |||.++.-..+ +.+.-....+.++..+...+.+.|..
T Consensus 285 ~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~--~~~~~~~~g~~~~~~~~~~l~~~i~~ 361 (394)
T cd03794 285 KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA--ELVEEAGAGLVVPPGDPEALAAAILE 361 (394)
T ss_pred hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch--hhhccCCcceEeCCCCHHHHHHHHHH
Confidence 46788999999999999776533 456899999997 77777643222 22222256677777788777777766
Q ss_pred C--CHHHHHHHHHHHHhhhh-eeeec
Q 013815 387 I--SEKRYRRMQMRVKKVQQ-HFLWH 409 (436)
Q Consensus 387 I--s~e~i~~Mr~~l~~v~~-~f~y~ 409 (436)
+ .+++..+|.++..+... +|.|.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 362 LLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 5 67888888887776544 55543
No 16
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.98 E-value=0.074 Score=52.65 Aligned_cols=95 Identities=17% Similarity=0.121 Sum_probs=65.5
Q ss_pred chhHHHhhccccEEEeeCCC------CCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh
Q 013815 312 KMDYIQHMKSSKYCICAKGY------EVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd------~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~ 385 (436)
..+..+.|..+..++.|.-. ......++|||.+|| |||.++.--. .+.+.-....+.++..+...+.+.+.
T Consensus 255 ~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~--~e~i~~~~~g~~~~~~d~~~l~~~i~ 331 (367)
T cd05844 255 HAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGI--PEAVEDGETGLLVPEGDVAALAAALG 331 (367)
T ss_pred HHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCc--hhheecCCeeEEECCCCHHHHHHHHH
Confidence 35677889999998887532 123678999999997 9998886432 34444456677888888877666665
Q ss_pred cC--CHHHHHHHHHHHHh-hhheeeec
Q 013815 386 SI--SEKRYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 386 ~I--s~e~i~~Mr~~l~~-v~~~f~y~ 409 (436)
.+ +++...+|.++.++ +..+|.|.
T Consensus 332 ~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 332 RLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 53 46667788877765 44566554
No 17
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.95 E-value=0.07 Score=53.61 Aligned_cols=95 Identities=18% Similarity=0.071 Sum_probs=66.7
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.|..+..+++|.-......-++|||.+|| |||.+|.-- ..+++.-......++..+...+.+.|..+ .+
T Consensus 263 ~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 263 RDDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVALARALQPYVSDP 339 (374)
T ss_pred cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 35678889999999988655556788999999996 999988532 33455555667788888887666666554 45
Q ss_pred HHHHHHHHHHHhh-hheeeec
Q 013815 390 KRYRRMQMRVKKV-QQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v-~~~f~y~ 409 (436)
+...+|.++.++. ..+|.|.
T Consensus 340 ~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 340 AARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 6666776666543 4555554
No 18
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.70 E-value=0.035 Score=52.99 Aligned_cols=93 Identities=17% Similarity=0.090 Sum_probs=65.0
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.|..+.+|+.|.........++|||.+|| |||.++.-.. .+.+.=....+.++..+...+.+.+..+ .+
T Consensus 254 ~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 254 RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEALADAIERLIEDP 330 (359)
T ss_pred cccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHHHHHHHHHHHhCH
Confidence 45678899999999999876666788999999996 7777764322 2334324556777877777666666553 46
Q ss_pred HHHHHHHHHHHhh-hheee
Q 013815 390 KRYRRMQMRVKKV-QQHFL 407 (436)
Q Consensus 390 e~i~~Mr~~l~~v-~~~f~ 407 (436)
+...+|.++.++. ..+|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 331 ELRARMGQAARKRAEEEFD 349 (359)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 7777777776654 44443
No 19
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=95.66 E-value=0.035 Score=54.50 Aligned_cols=94 Identities=19% Similarity=0.118 Sum_probs=68.0
Q ss_pred chhHHHhhccccEEEeeC-CCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh-c--C
Q 013815 312 KMDYIQHMKSSKYCICAK-GYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL-S--I 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~-Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~-~--I 387 (436)
..+..+.|..|..++.|. -.......++|||.+|| |||.++. -+..+.+.-..-.+.++..+...+.+.+. . .
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~ 330 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEALAQALDQILSL 330 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhh
Confidence 467889999999999987 33334678999999999 7777763 24455565555677788888887777763 2 3
Q ss_pred CHHHHHHHHHHHHhh-hheeee
Q 013815 388 SEKRYRRMQMRVKKV-QQHFLW 408 (436)
Q Consensus 388 s~e~i~~Mr~~l~~v-~~~f~y 408 (436)
++++..+|+++.++. ..+|.|
T Consensus 331 ~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 331 LPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred CHHHHHHHHHHHHHHHHHhhhh
Confidence 688888888887764 344544
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=95.66 E-value=0.094 Score=54.62 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=67.4
Q ss_pred chhHHHhhccccEEEeeCC-------CCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHH
Q 013815 312 KMDYIQHMKSSKYCICAKG-------YEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNIL 384 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~G-------d~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL 384 (436)
..+..+.|..+..++.|.= +| ...-+.|||.+|| |||.++.--.| +++.-..-.+.++..+...+.+.+
T Consensus 289 ~~el~~~l~~aDv~v~pS~~~~~g~~Eg-~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~la~ai 364 (406)
T PRK15427 289 SHEVKAMLDDADVFLLPSVTGADGDMEG-IPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQALAQRL 364 (406)
T ss_pred HHHHHHHHHhCCEEEECCccCCCCCccC-ccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHHHHHHH
Confidence 4677899999999999852 23 3567999999996 99988753333 445445567788888888777666
Q ss_pred hcC---CHHHHHHHHHHHHh-hhheeeec
Q 013815 385 LSI---SEKRYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 385 ~~I---s~e~i~~Mr~~l~~-v~~~f~y~ 409 (436)
..+ ++++..+|.++.++ +..+|-|.
T Consensus 365 ~~l~~~d~~~~~~~~~~ar~~v~~~f~~~ 393 (406)
T PRK15427 365 AAFSQLDTDELAPVVKRAREKVETDFNQQ 393 (406)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCHH
Confidence 654 66778888888775 44555543
No 21
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=95.44 E-value=0.031 Score=54.30 Aligned_cols=94 Identities=17% Similarity=0.182 Sum_probs=66.9
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc-C-CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS-I-SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~-I-s~ 389 (436)
..++.+.+..+.+++.|.-....+..++|||.+|| |||.++.-. ..+.+ .+..+.++..+...+.+.|.. + .+
T Consensus 263 ~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~--~~~~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 263 DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVA--GDAALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--cccee--cCceeeeCCCCHHHHHHHHHHHhcCH
Confidence 46778899999999998655445677999999997 777766422 22333 345667777787777777666 3 57
Q ss_pred HHHHHHHHHHHhhhheeeecC
Q 013815 390 KRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
+...+|.++.+++...+.|+.
T Consensus 338 ~~~~~~~~~~~~~~~~~sw~~ 358 (365)
T cd03809 338 ALREELRERGLARAKRFSWEK 358 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 777888888877777766643
No 22
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=95.20 E-value=0.07 Score=53.10 Aligned_cols=72 Identities=13% Similarity=0.028 Sum_probs=49.8
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
..+..+.+..+..+++|.-.+ ....++|||++|| |||.++.--.+ +.+.=....+.++..+...+.+.+..+
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~-~g~~~~Eama~G~-Pvi~~~~~~~~--e~i~~~~~G~~~~~~~~~~la~~i~~l 323 (351)
T cd03804 252 DEELRDLYARARAFLFPAEED-FGIVPVEAMASGT-PVIAYGKGGAL--ETVIDGVTGILFEEQTVESLAAAVERF 323 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCC-CCchHHHHHHcCC-CEEEeCCCCCc--ceeeCCCCEEEeCCCCHHHHHHHHHHH
Confidence 456788999999999986643 4567899999998 99988743222 333323457778777776655555443
No 23
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=95.17 E-value=0.046 Score=54.55 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=67.8
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.+..+..+++|.-.......++|||.+|+ |||.++.- ...+.+.-....+.++..+...+.+.+..+ ++
T Consensus 293 ~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 293 REDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP 369 (398)
T ss_pred HHHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH
Confidence 35678889999999999776666778999999995 99988742 233445444567778877777665555443 47
Q ss_pred HHHHHHHHHHHhhh-heeeec
Q 013815 390 KRYRRMQMRVKKVQ-QHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~-~~f~y~ 409 (436)
+.+.+|.++.++.. .+|.|+
T Consensus 370 ~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 370 ALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 78888888877654 666554
No 24
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.12 E-value=0.061 Score=53.32 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=66.6
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SEK 390 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~e 390 (436)
.+..+.|..+..++.|.-.......+.|||.+| +|||.++.-. ..+++.-..-...++..+...+.+.+..+ .++
T Consensus 262 ~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~ 338 (371)
T cd04962 262 DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDE 338 (371)
T ss_pred ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHH
Confidence 467889999999999975555577899999999 6888877532 33445444445667777777666555443 577
Q ss_pred HHHHHHHHHHhh-hheeeec
Q 013815 391 RYRRMQMRVKKV-QQHFLWH 409 (436)
Q Consensus 391 ~i~~Mr~~l~~v-~~~f~y~ 409 (436)
.+.+|+++.++. ..+|.|.
T Consensus 339 ~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 339 LWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 888999888775 5555443
No 25
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=95.04 E-value=0.21 Score=48.80 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=58.6
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC---CH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI---SE 389 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I---s~ 389 (436)
.+..+.|..+.+.+.|.........++|||.+|| |||.+|.-. ..+.+. +....++..+...+.+.+..+ ++
T Consensus 254 ~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~--~~g~~~~~~~~~~~~~~i~~ll~~~~ 328 (360)
T cd04951 254 DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGG--VREVVG--DSGLIVPISDPEALANKIDEILKMSG 328 (360)
T ss_pred ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCC--hhhEec--CCceEeCCCCHHHHHHHHHHHHhCCH
Confidence 4667889999999999876666788999999999 888877421 122232 134456667776655555443 45
Q ss_pred HHHHHHHHHHHhhhheeee
Q 013815 390 KRYRRMQMRVKKVQQHFLW 408 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y 408 (436)
+....|.++-..+...|.|
T Consensus 329 ~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 329 EERDIIGARRERIVKKFSI 347 (360)
T ss_pred HHHHHHHHHHHHHHHhcCH
Confidence 5555565553334555544
No 26
>PRK10307 putative glycosyl transferase; Provisional
Probab=95.04 E-value=0.12 Score=52.96 Aligned_cols=96 Identities=5% Similarity=0.025 Sum_probs=67.0
Q ss_pred chhHHHhhccccEEEeeCCCCC----CchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 312 KMDYIQHMKSSKYCICAKGYEV----NSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~----~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
..+..+.++.+..++.|.=.+. ....++|+|++| +|||.++.--....+++. .-.+.++..++..+.+.|..+
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l 370 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAAL 370 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHH
Confidence 4677889999999998853322 134589999999 688887643223334555 457778888888777777665
Q ss_pred --CHHHHHHHHHHHHh-hhheeeecC
Q 013815 388 --SEKRYRRMQMRVKK-VQQHFLWHP 410 (436)
Q Consensus 388 --s~e~i~~Mr~~l~~-v~~~f~y~~ 410 (436)
+++...+|+++.++ +..+|.|..
T Consensus 371 ~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 371 ARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 46778889888876 445676654
No 27
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=94.88 E-value=0.078 Score=51.12 Aligned_cols=88 Identities=16% Similarity=0.086 Sum_probs=62.6
Q ss_pred chhHHHhhccccEEEeeCC-CCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 013815 312 KMDYIQHMKSSKYCICAKG-YEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--S 388 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~G-d~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s 388 (436)
..+..+.+..+..+++|.- .......++|||.+| +|||.++.- ...+.++.....+.++..++..+.+.+..+ .
T Consensus 253 ~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 253 QEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLIDD 329 (359)
T ss_pred HHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC
Confidence 4778899999999999963 334567899999999 677776632 233455555567888888877666555543 4
Q ss_pred HHHHHHHHHHHHhh
Q 013815 389 EKRYRRMQMRVKKV 402 (436)
Q Consensus 389 ~e~i~~Mr~~l~~v 402 (436)
++...+|+++.++.
T Consensus 330 ~~~~~~~~~~~~~~ 343 (359)
T cd03823 330 PDLLERLRAGIEPP 343 (359)
T ss_pred hHHHHHHHHhHHHh
Confidence 77777887766543
No 28
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.87 E-value=0.2 Score=52.41 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=60.3
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCC---CCcEEEEEcCCChhhHHHHHhc--
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILN---WESFAVFVLEKDIPNLKNILLS-- 386 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iD---w~~fsV~Ipe~dv~~l~~iL~~-- 386 (436)
..+..+.|+.|..++.|.-......-++|||++||.||. ++. -=|.++++. -..-.+.++ +...+.+.+..
T Consensus 315 ~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll 390 (419)
T cd03806 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL 390 (419)
T ss_pred HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH
Confidence 467789999999999987666668899999999997775 442 135555553 222233332 44433333322
Q ss_pred -CCHHHHHHHHHHHHhhhheeeec
Q 013815 387 -ISEKRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 387 -Is~e~i~~Mr~~l~~v~~~f~y~ 409 (436)
.+++....|+++-+++..+|.|+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 391 SLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hCCHHHHHHHHHHHHHHHHhhCHH
Confidence 35666666777777777776654
No 29
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=94.58 E-value=0.064 Score=54.19 Aligned_cols=89 Identities=17% Similarity=0.246 Sum_probs=64.8
Q ss_pred chhHHHhhccccEEEeeCCCC-----------CCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH
Q 013815 312 KMDYIQHMKSSKYCICAKGYE-----------VNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNL 380 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~-----------~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l 380 (436)
+.+..+.+.. .|+|++.+++ ..-..++++|++|+ |||+++.-.++ +.+.=....+.++ ++.++
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~--~~V~~~~~G~~v~--~~~el 290 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA--DFIVENGLGFVVD--SLEEL 290 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH--HHHHhCCceEEeC--CHHHH
Confidence 4555666665 9999988761 11234888888885 99998754333 4444455666666 56789
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhhee
Q 013815 381 KNILLSISEKRYRRMQMRVKKVQQHF 406 (436)
Q Consensus 381 ~~iL~~Is~e~i~~Mr~~l~~v~~~f 406 (436)
.+.|..++++++.+|+++.+++.+.+
T Consensus 291 ~~~l~~~~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 291 PEIIDNITEEEYQEMVENVKKISKLL 316 (333)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987774
No 30
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=94.50 E-value=0.057 Score=51.58 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=61.2
Q ss_pred CchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC-CH
Q 013815 311 GKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI-SE 389 (436)
Q Consensus 311 ~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I-s~ 389 (436)
...+..+.+.++.++++|.........++||+.+|| |||.++.-. ..+.+.-....+.+...+..++.+.|..+ .+
T Consensus 268 ~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~--~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 268 PHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGG--IPEIITDGENGLLVPPGDPEALAEAILRLLAD 344 (377)
T ss_pred CHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCC--hHHHhcCCcceeEECCCCHHHHHHHHHHHhcC
Confidence 346778999999999999877667788999999999 666665322 22334444445777777877665555543 22
Q ss_pred HHHHHHHHHHHhhhheeeec
Q 013815 390 KRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y~ 409 (436)
.+....+++...+...+.|.
T Consensus 345 ~~~~~~~~~~~~~~~~~s~~ 364 (377)
T cd03798 345 PWLRLGRAARRRVAERFSWE 364 (377)
T ss_pred cHHHHhHHHHHHHHHHhhHH
Confidence 22233333444455555443
No 31
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=94.41 E-value=0.095 Score=50.24 Aligned_cols=93 Identities=13% Similarity=0.105 Sum_probs=62.8
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.|..+..+++|......+..+.|||.+|| |||.++.-.. .+.+.= ..+.++..+...+.+.+..+ .+
T Consensus 259 ~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 259 RSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEALAEAIEALLADP 333 (365)
T ss_pred cccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHHHHHHHHHHHhCh
Confidence 45678899999999999877666788999999996 7777763221 222221 55667777776665555544 34
Q ss_pred HHHHHHHHHHHh-hhheeeec
Q 013815 390 KRYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~-v~~~f~y~ 409 (436)
++..+|.++.++ +.++|.|.
T Consensus 334 ~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 334 ALRQALGEAARERIEENFSIE 354 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 677777777665 34556554
No 32
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=94.20 E-value=0.32 Score=49.95 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=61.2
Q ss_pred chhHHHhhccccEEEeeCCC-CCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEE-EEcCCChhhHHHHHhc-CC
Q 013815 312 KMDYIQHMKSSKYCICAKGY-EVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAV-FVLEKDIPNLKNILLS-IS 388 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd-~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV-~Ipe~dv~~l~~iL~~-Is 388 (436)
..+..+.|+.|..|++|... .....-++|||++| +|||.++.--. .+++.-..-.. .++..+...+.+.|.. +.
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~--~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~ 343 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGI--TEFVLEGITGYHLAEPMTSDSIISDINRTLA 343 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCc--HhhcccCCceEEEeCCCCHHHHHHHHHHHHc
Confidence 45678889999999999753 44467899999999 78988875322 23332222232 4556666655555543 23
Q ss_pred HHHHHHHHHHHHh-hhheeeecC
Q 013815 389 EKRYRRMQMRVKK-VQQHFLWHP 410 (436)
Q Consensus 389 ~e~i~~Mr~~l~~-v~~~f~y~~ 410 (436)
+.+..+|.++.++ +..+|.|..
T Consensus 344 d~~~~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 344 DPELTQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHH
Confidence 4445777777764 456666643
No 33
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=94.19 E-value=0.47 Score=47.65 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=58.8
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SEK 390 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~e 390 (436)
.+..+.+..+.+++.|.........+.|||.+| +|||.++.-- +-+-+.+.. -.+.++. +...+.+.+..+ .++
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~~~~ 366 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLANDPD 366 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHhChH
Confidence 455688999999999877665677899999999 5777666422 112233433 3444554 555544444433 356
Q ss_pred HHHHHHHHHHh-hhheeeec
Q 013815 391 RYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 391 ~i~~Mr~~l~~-v~~~f~y~ 409 (436)
...+|+++.++ +...|.|.
T Consensus 367 ~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 367 LADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHhcCHH
Confidence 78888887765 44566554
No 34
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=94.17 E-value=0.13 Score=51.73 Aligned_cols=95 Identities=17% Similarity=0.254 Sum_probs=64.6
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCCh------hhHHHHHh
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDI------PNLKNILL 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv------~~l~~iL~ 385 (436)
..+..+.|..|..++.|.-.......++|||.+|| |||.++.-. ..+++.-....+.++..+. ..+.+.|.
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGG--IPEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCC--HHHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 46678899999999999765555678899999999 888887432 2234433444566666665 55555554
Q ss_pred cC--CHHHHHHHHHHHHh-hhheeeec
Q 013815 386 SI--SEKRYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 386 ~I--s~e~i~~Mr~~l~~-v~~~f~y~ 409 (436)
.+ ++++..+|.++.++ +.++|.|.
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 43 57777888887765 34555553
No 35
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=93.96 E-value=0.34 Score=51.13 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=60.3
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCC-CCC-----cEEEEEcCCChhhHHHHHh
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWE-----SFAVFVLEKDIPNLKNILL 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~i-Dw~-----~fsV~Ipe~dv~~l~~iL~ 385 (436)
.....+.++.+.++++|.-..+......|||.+||.||. ++.--+ .+.+ |.. .-.+.++..+...+.+.|.
T Consensus 356 ~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~--~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~ 432 (473)
T TIGR02095 356 EALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGL--ADTVVDGDPEAESGTGFLFEEYDPGALLAALS 432 (473)
T ss_pred HHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCc--cceEecCCCCCCCCceEEeCCCCHHHHHHHHH
Confidence 344567899999999998887778889999999997665 443222 2222 321 4567778777766555544
Q ss_pred cC------CHHHHHHHHHHHHhhhheeeec
Q 013815 386 SI------SEKRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 386 ~I------s~e~i~~Mr~~l~~v~~~f~y~ 409 (436)
.+ .++...+|.++.. ...|.|.
T Consensus 433 ~~l~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 433 RALRLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 32 4566777776543 2445444
No 36
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.61 E-value=0.39 Score=50.19 Aligned_cols=160 Identities=13% Similarity=0.175 Sum_probs=95.7
Q ss_pred CCCceeCcceecCCCccCCCC-CCccc-cCCCCCCCCceEEEeeccCC-CCchHHHHhHhhcCCCCcEEEecccCCcCCC
Q 013815 225 KEGFVFGKDVALPETYVLSPQ-NPLRA-IGGKPASQRSILAFFAGRMH-GYLRPILLHHWENKDPDMKIFGQMPMVKGKG 301 (436)
Q Consensus 225 ~~~~rp~kDVvIP~~~~~t~~-~P~s~-~~~~~~~~R~~L~fFaG~~~-G~iR~~L~~~~~~~~~~~~i~~~c~~~~g~~ 301 (436)
...|+-+.|+.+||-+..... +|... ....-..+++..+.+.-.+. ...|....+.+... =.+.+.|+|-... .
T Consensus 160 T~Tyr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~~~~~R~~~~~~L~k~-l~iD~YG~c~~~~--~ 236 (372)
T KOG2619|consen 160 TMTYRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCIPRSARLDYYKELMKH-LEIDSYGECLRKN--A 236 (372)
T ss_pred eEEEeccCCCCCccceEeecccCceecccccccccccceeeeeccccCcchHHHHHHHHHHhh-Cceeecccccccc--c
Confidence 346778888999986543322 32111 11111345566666666554 45777777666543 3556677775320 0
Q ss_pred CCCCCcccCCchhHHHhhccccEEEeeC---CCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcC-CCh
Q 013815 302 KGKGKGKRKGKMDYIQHMKSSKYCICAK---GYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE-KDI 377 (436)
Q Consensus 302 ~c~g~~~~~~~~~y~~~m~~S~FCL~P~---Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe-~dv 377 (436)
+ ........+.+..-||-|.-- -...-+.-|+-|+.+|.|||+++......|- + .+--|.|.. ..+
T Consensus 237 ~------~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~fv---P-~~SfI~vdDF~s~ 306 (372)
T KOG2619|consen 237 N------RDPSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENFV---P-PDSFIHVDDFQSP 306 (372)
T ss_pred c------CCCCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCccccccC---C-CcceEehhhcCCH
Confidence 1 123344577888999999754 2344578899999999999999986554442 3 333344443 234
Q ss_pred hhHHHHHhcCC--HHHHHHHHH
Q 013815 378 PNLKNILLSIS--EKRYRRMQM 397 (436)
Q Consensus 378 ~~l~~iL~~Is--~e~i~~Mr~ 397 (436)
.+|...|+.+. +..+.+-.+
T Consensus 307 ~ela~ylk~L~~n~~~Y~~Yf~ 328 (372)
T KOG2619|consen 307 QELAAYLKKLDKNPAAYLSYFE 328 (372)
T ss_pred HHHHHHHHHhhcCHHHHHHHHH
Confidence 57888888885 444444333
No 37
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.46 E-value=0.54 Score=46.09 Aligned_cols=92 Identities=20% Similarity=0.328 Sum_probs=55.3
Q ss_pred chhHHHhhccccEEEeeCCC-CCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCC-hhhHHHHHhcCCH
Q 013815 312 KMDYIQHMKSSKYCICAKGY-EVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKD-IPNLKNILLSISE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd-~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~d-v~~l~~iL~~Is~ 389 (436)
..+..+.+..+..++.|.-. ......++|||.+|| |||.++.- +..+++.-. ...++..+ +.+....|.. .+
T Consensus 258 ~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~l~~~i~~l~~-~~ 331 (363)
T cd04955 258 DQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDDLASLLEELEA-DP 331 (363)
T ss_pred hHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchHHHHHHHHHHh-CH
Confidence 35667888888888888655 445678999999999 77777633 223444332 33344444 3332222222 34
Q ss_pred HHHHHHHHHHHhhh-heeeec
Q 013815 390 KRYRRMQMRVKKVQ-QHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~-~~f~y~ 409 (436)
+.+.+|.++.++.. .+|.|+
T Consensus 332 ~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 332 EEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 67777877776543 345543
No 38
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=93.18 E-value=0.82 Score=47.61 Aligned_cols=86 Identities=15% Similarity=0.178 Sum_probs=55.2
Q ss_pred chhHHHhhccccEEEeeC----CCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 312 KMDYIQHMKSSKYCICAK----GYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~----Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
..++.+.|..+..++.|. |.+ ...-++|||.+|+ |||.++.--. .+++.-..-.+.++ +...|.+.+..+
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G~-PVI~s~~~~~--~eiv~~~~~G~lv~--d~~~la~~i~~l 378 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCGL-PVCALDFKCI--DELVKHGENGLVFG--DSEELAEQLIDL 378 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcCC-CEEEeCCCCH--HHHhcCCCCEEEEC--CHHHHHHHHHHH
Confidence 467888999999987643 333 3567999999999 9999874322 24443233333343 555444444332
Q ss_pred -----CHHHHHHHHHHHHhhh
Q 013815 388 -----SEKRYRRMQMRVKKVQ 403 (436)
Q Consensus 388 -----s~e~i~~Mr~~l~~v~ 403 (436)
++++..+|.++.++..
T Consensus 379 l~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 379 LSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HhcCCCHHHHHHHHHHHHHhh
Confidence 2678888988776654
No 39
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=92.98 E-value=0.22 Score=49.90 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=65.5
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..+..+.+.++..++.|.-.......+.|||.+|| |||..+--.-| .+.+.=.+-.+.++..+...+.+.|..+ .+
T Consensus 269 ~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~ 346 (372)
T cd04949 269 TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLNDP 346 (372)
T ss_pred CCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHcCH
Confidence 34577889999999998755455688999999999 77766521111 2333334566777777776655555443 46
Q ss_pred HHHHHHHHHHHhhhheeeec
Q 013815 390 KRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f~y~ 409 (436)
+.+.+|+++.++...+|.|.
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78889998888776665543
No 40
>PRK00654 glgA glycogen synthase; Provisional
Probab=92.86 E-value=0.81 Score=48.46 Aligned_cols=84 Identities=10% Similarity=0.118 Sum_probs=55.5
Q ss_pred hHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCC-----cEEEEEcCCChhhHHHHHhcC-
Q 013815 314 DYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWE-----SFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~-----~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
.....++.+.+++.|.=..+......|||.+||+||+-..+ -++ +-+.|.. .-.+.++..+...+.+.|..+
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G~~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l 426 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-GLA-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRAL 426 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-Ccc-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 34577899999999987777788999999999988874321 111 1122321 446777888877665555432
Q ss_pred ----CHHHHHHHHHHH
Q 013815 388 ----SEKRYRRMQMRV 399 (436)
Q Consensus 388 ----s~e~i~~Mr~~l 399 (436)
.++...+|.++.
T Consensus 427 ~~~~~~~~~~~~~~~~ 442 (466)
T PRK00654 427 ELYRQPPLWRALQRQA 442 (466)
T ss_pred HHhcCHHHHHHHHHHH
Confidence 345566666654
No 41
>PRK14098 glycogen synthase; Provisional
Probab=92.81 E-value=0.83 Score=49.12 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=60.2
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCC---CcEEEEEcCCChhhHHHHHhcC-
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNW---ESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw---~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
.....+.++.+.+++.|.-..+......|||++||+||+...+- ++ +.+.|+ ..-.+.++..+...+.+.|..+
T Consensus 372 ~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l 449 (489)
T PRK14098 372 DAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEAL 449 (489)
T ss_pred HHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHH
Confidence 34556889999999999877777889999999999999865421 11 111121 3345667887877665555431
Q ss_pred ----CHHHHHHHHHHHHhhhheeeec
Q 013815 388 ----SEKRYRRMQMRVKKVQQHFLWH 409 (436)
Q Consensus 388 ----s~e~i~~Mr~~l~~v~~~f~y~ 409 (436)
.++++.+|+++. +.+.|.|.
T Consensus 450 ~~~~~~~~~~~~~~~~--~~~~fsw~ 473 (489)
T PRK14098 450 ALYHDEERWEELVLEA--MERDFSWK 473 (489)
T ss_pred HHHcCHHHHHHHHHHH--hcCCCChH
Confidence 356666665533 23445444
No 42
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=92.54 E-value=0.29 Score=39.70 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=45.3
Q ss_pred EEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEc-CCChhhHHHHHhcCCHHHHHHHHHHHHh-h
Q 013815 325 CICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVL-EKDIPNLKNILLSISEKRYRRMQMRVKK-V 402 (436)
Q Consensus 325 CL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ip-e~dv~~l~~iL~~Is~e~i~~Mr~~l~~-v 402 (436)
||.|.-.+..+.|+||+|.+||..|.-.. ..+.+.++..+-.+.+. .+++......|.+ .++++++|.++..+ +
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~---~~~~~~~~~~~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v 77 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISDDS---PGLREIFEDGEHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARERV 77 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEECCh---HHHHHHcCCCCeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Confidence 44453333357899999999997665433 11222344554555554 3344333333323 68888888887765 3
Q ss_pred hheeee
Q 013815 403 QQHFLW 408 (436)
Q Consensus 403 ~~~f~y 408 (436)
..++.|
T Consensus 78 ~~~~t~ 83 (92)
T PF13524_consen 78 LKRHTW 83 (92)
T ss_pred HHhCCH
Confidence 445544
No 43
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=92.47 E-value=0.58 Score=47.29 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=55.1
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC-CHH-
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI-SEK- 390 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I-s~e- 390 (436)
..+.+.+..+..++.|.-.......+.|||++| +|||.++..--+ .+++.=..-.+.++..+...+.+.+..+ .+.
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~-~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGP-RDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCCh-HHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 345566778888888876655678999999999 677777722222 2344334455666888887666666554 222
Q ss_pred --HHHHHHHHHHhh
Q 013815 391 --RYRRMQMRVKKV 402 (436)
Q Consensus 391 --~i~~Mr~~l~~v 402 (436)
....+++++.+.
T Consensus 327 ~~~~~~~~~~~~~~ 340 (359)
T PRK09922 327 KYQHDAIPNSIERF 340 (359)
T ss_pred cCCHHHHHHHHHHh
Confidence 234455544443
No 44
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=91.85 E-value=0.51 Score=45.82 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=46.2
Q ss_pred chhHHHhhccccEEEeeCC-CCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 312 KMDYIQHMKSSKYCICAKG-YEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~G-d~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
..+..+.|+.+.+++.|.- .......++|||.+|| |||.+|.--.+ ++++-..-.+.++. +..+.+.|..+
T Consensus 234 ~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~~~~--e~i~~~~~g~l~~~--~~~l~~~l~~l 305 (335)
T cd03802 234 GAEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRGAVP--EVVEDGVTGFLVDS--VEELAAAVARA 305 (335)
T ss_pred HHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCCCch--hheeCCCcEEEeCC--HHHHHHHHHHH
Confidence 3456788999999999974 2334678999999998 99998854333 44433222333443 55555555544
No 45
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=91.60 E-value=0.76 Score=44.28 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=59.6
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..++.+.|..++++++|......+..++|||.+||-. |.++.- .+.+.+.-..-.+.++..+. .+.+.+..+ .+
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~Pv-I~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~ 344 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPV-VAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQDP 344 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcE-EEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHhCh
Confidence 4678889999999999987666678899999998754 455532 22344443445666666653 333333332 35
Q ss_pred HHHHHHHHHHHhhhhee
Q 013815 390 KRYRRMQMRVKKVQQHF 406 (436)
Q Consensus 390 e~i~~Mr~~l~~v~~~f 406 (436)
+...+|+++.++...++
T Consensus 345 ~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 345 ELRRRLSKNAEESAEKF 361 (374)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66678888877766553
No 46
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=91.51 E-value=1.1 Score=45.98 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=55.0
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC---C
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI---S 388 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I---s 388 (436)
..+..+.+..+..++.|.-.......+.|||.+|| |||.++.--. .++++-. ..+.++. +...+.+.|..+ +
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~--~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGI--PEVLPPD-MILLAEP-DVESIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCc--hhheeCC-ceeecCC-CHHHHHHHHHHHHhCh
Confidence 46788899999999988755445678999999998 5566664332 2444322 2344444 544443333322 2
Q ss_pred HHHHHHHHHHHHhhhheeeecC
Q 013815 389 EKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 389 ~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
.++...+++...++..+|.|..
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHH
Confidence 2222223444445677776665
No 47
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=91.49 E-value=0.61 Score=47.82 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=59.2
Q ss_pred hHHHhhccccEEEeeC--CCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 314 DYIQHMKSSKYCICAK--GYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 314 ~y~~~m~~S~FCL~P~--Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
+....+..+..+++|. +.|. ...+.|||.+|| |||.++.- .+.+..-..-.+.++ .+...+.+.+..+ .+
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~-~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGI-QNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLANP 363 (397)
T ss_pred CHHHHHHhCCEEEecccccCCc-ccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHcCH
Confidence 5677889999999985 4443 467999999998 99988742 122211123345566 6666555555443 46
Q ss_pred HHHHHHHHHHHhh-hheeeecC
Q 013815 390 KRYRRMQMRVKKV-QQHFLWHP 410 (436)
Q Consensus 390 e~i~~Mr~~l~~v-~~~f~y~~ 410 (436)
+...+|.++.++. ..+|.|..
T Consensus 364 ~~~~~~~~~ar~~v~~~fsw~~ 385 (397)
T TIGR03087 364 AEREELGQAARRRVLQHYHWPR 385 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 6778888887764 46676653
No 48
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=91.07 E-value=1.5 Score=45.99 Aligned_cols=86 Identities=10% Similarity=0.128 Sum_probs=55.6
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCC-----cEEEEEcCCChhhHHHHHhcC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWE-----SFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~-----~fsV~Ipe~dv~~l~~iL~~I 387 (436)
....+.++.+.+.+.|.-..+......|||++||.||.-... -++ +-+.|.. .-.+.++..+...+.+.+..+
T Consensus 362 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g-g~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~ 439 (476)
T cd03791 362 ALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG-GLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRA 439 (476)
T ss_pred HHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC-Ccc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHH
Confidence 444578899999999987777788999999999998764322 111 1122332 146667777776555555432
Q ss_pred -----CHHHHHHHHHHHH
Q 013815 388 -----SEKRYRRMQMRVK 400 (436)
Q Consensus 388 -----s~e~i~~Mr~~l~ 400 (436)
.++...+|+++..
T Consensus 440 l~~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 440 LALYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHHHcCHHHHHHHHHHHh
Confidence 3566677766543
No 49
>PRK14099 glycogen synthase; Provisional
Probab=90.83 E-value=2 Score=46.12 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=61.3
Q ss_pred hhHHHhh-ccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCC--------cEEEEEcCCChhhHHHH
Q 013815 313 MDYIQHM-KSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWE--------SFAVFVLEKDIPNLKNI 383 (436)
Q Consensus 313 ~~y~~~m-~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~--------~fsV~Ipe~dv~~l~~i 383 (436)
.+....+ +.+.+.+.|.=..+......|||++||+||+ ++.=-+| +-+.|.. .-.+.++..+...|.+.
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~a 437 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAA 437 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHH
Confidence 4555555 4689999998777788999999999999988 4421111 1122332 34677788887766665
Q ss_pred Hhc----C-CHHHHHHHHHHHHhhhheeeecC
Q 013815 384 LLS----I-SEKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 384 L~~----I-s~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
|.. + .++...+|+++.. ...|.|..
T Consensus 438 i~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 438 LRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred HHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 543 2 4677777887654 34555544
No 50
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=90.50 E-value=2.7 Score=43.62 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=56.2
Q ss_pred hhHHHhhccc--cEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcC-CChhhHHHHHhcC--
Q 013815 313 MDYIQHMKSS--KYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE-KDIPNLKNILLSI-- 387 (436)
Q Consensus 313 ~~y~~~m~~S--~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe-~dv~~l~~iL~~I-- 387 (436)
.+..+.+..+ ..++.|.........+.|||.+|+ |||.++.--.| ++++=..-.+.++. .+...+.+.|..+
T Consensus 300 ~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~ 376 (407)
T cd04946 300 SEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID 376 (407)
T ss_pred HHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 4555666543 333334433334678999999996 99988743333 44543434555654 3565555555443
Q ss_pred CHHHHHHHHHHHHhhh-heeee
Q 013815 388 SEKRYRRMQMRVKKVQ-QHFLW 408 (436)
Q Consensus 388 s~e~i~~Mr~~l~~v~-~~f~y 408 (436)
++++..+|+++.++.+ .+|-+
T Consensus 377 ~~~~~~~m~~~ar~~~~~~f~~ 398 (407)
T cd04946 377 NEEEYQTMREKAREKWEENFNA 398 (407)
T ss_pred CHHHHHHHHHHHHHHHHHHcCH
Confidence 5888899998887654 45443
No 51
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=90.31 E-value=3 Score=40.68 Aligned_cols=95 Identities=12% Similarity=0.062 Sum_probs=62.5
Q ss_pred chhHHHhhccccEEEeeCC--CCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--
Q 013815 312 KMDYIQHMKSSKYCICAKG--YEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI-- 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~G--d~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I-- 387 (436)
..++.+.+..+..|++|.- .......+.|||.+|| |||.++.-..+ +.+.+.....+.++..+...+.+.+..+
T Consensus 254 ~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~-Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 254 DEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGK-PVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred HHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCC-CEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 4567889999999999852 2233567999999975 66666532222 1112235566777778877666666554
Q ss_pred CHHHHHHHHHHHHhh-hheeee
Q 013815 388 SEKRYRRMQMRVKKV-QQHFLW 408 (436)
Q Consensus 388 s~e~i~~Mr~~l~~v-~~~f~y 408 (436)
.+++..+|+++.++. .++|.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 332 DPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred CHHHHHHHHHHHHHHHHHhcch
Confidence 578888999988875 445544
No 52
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=90.10 E-value=1.2 Score=42.16 Aligned_cols=82 Identities=17% Similarity=0.086 Sum_probs=54.2
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH----HHHHhcCC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNL----KNILLSIS 388 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l----~~iL~~Is 388 (436)
.+..+.+..+.++++|.-.......++|||.+||.. |.++.- ...+++.=....+.++.++...+ ..++....
T Consensus 255 ~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~Pv-I~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 331 (353)
T cd03811 255 SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPV-VATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLL 331 (353)
T ss_pred CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCE-EEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccC
Confidence 456788999999999976555577899999999864 445433 22344544556777888877664 33333333
Q ss_pred -HHHHHHHHH
Q 013815 389 -EKRYRRMQM 397 (436)
Q Consensus 389 -~e~i~~Mr~ 397 (436)
++...+|..
T Consensus 332 ~~~~~~~~~~ 341 (353)
T cd03811 332 DPELRERLAA 341 (353)
T ss_pred ChHHHHHHHH
Confidence 555666666
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=89.99 E-value=1.3 Score=43.23 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=63.2
Q ss_pred chhHHHhhccccEEEeeCCC------CCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh
Q 013815 312 KMDYIQHMKSSKYCICAKGY------EVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd------~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~ 385 (436)
..+..+.+.++.++++|... ......++|||.+||-.|. ++.- ...+++.=..-...+++.+...+.+.|.
T Consensus 246 ~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~~--~~~~~i~~~~~g~~~~~~~~~~l~~~i~ 322 (355)
T cd03799 246 QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDVS--GIPELVEDGETGLLVPPGDPEALADAIE 322 (355)
T ss_pred hHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCCC--CcchhhhCCCceEEeCCCCHHHHHHHHH
Confidence 46788999999999998654 3447889999999986665 4432 2234444344566777777766655555
Q ss_pred cC--CHHHHHHHHHHHHhh-hheeeec
Q 013815 386 SI--SEKRYRRMQMRVKKV-QQHFLWH 409 (436)
Q Consensus 386 ~I--s~e~i~~Mr~~l~~v-~~~f~y~ 409 (436)
.+ .+++..+|.++.++. ..+|.|.
T Consensus 323 ~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 323 RLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 43 466678888877653 4555543
No 54
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=89.97 E-value=0.7 Score=48.43 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=61.5
Q ss_pred hhHHHhhccc----cEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC-
Q 013815 313 MDYIQHMKSS----KYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 313 ~~y~~~m~~S----~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
.+..+.+..+ ..++.|.-......-+.|||++|| |||.++.-- ..++++=..-.+.++..|...+.+.+..+
T Consensus 328 ~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll 404 (439)
T TIGR02472 328 DDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDAL 404 (439)
T ss_pred HHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 3445555544 455556544445678999999999 999988532 33455445567778888877666555443
Q ss_pred -CHHHHHHHHHHHHh-hhheeeecC
Q 013815 388 -SEKRYRRMQMRVKK-VQQHFLWHP 410 (436)
Q Consensus 388 -s~e~i~~Mr~~l~~-v~~~f~y~~ 410 (436)
++++..+|.++.++ +..+|.|+.
T Consensus 405 ~~~~~~~~~~~~a~~~~~~~fsw~~ 429 (439)
T TIGR02472 405 SDSSQWQLWSRNGIEGVRRHYSWDA 429 (439)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 46667777777664 556676654
No 55
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=89.97 E-value=1.5 Score=42.89 Aligned_cols=94 Identities=10% Similarity=0.018 Sum_probs=63.5
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--SE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s~ 389 (436)
..++.+.|..|.+++.|......+..++|||.+||- ||.++.- +..+.+.-..-.+.++..+...+.+.|..+ .+
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~ 331 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP 331 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH
Confidence 456778899999999998776678899999999985 5555532 333444434456677777776555555443 46
Q ss_pred HHHHHHHHHHHhhh-heeee
Q 013815 390 KRYRRMQMRVKKVQ-QHFLW 408 (436)
Q Consensus 390 e~i~~Mr~~l~~v~-~~f~y 408 (436)
++..+|+++.++.. +.|.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~s~ 351 (365)
T cd03825 332 DEREELGEAARELAENEFDS 351 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCH
Confidence 66788888776543 34433
No 56
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=89.90 E-value=2 Score=44.87 Aligned_cols=89 Identities=16% Similarity=0.175 Sum_probs=58.4
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecC-----CccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc-
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISD-----NFVPPFFEILNWESFAVFVLEKDIPNLKNILLS- 386 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd-----~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~- 386 (436)
.+..+.+.++.+.+.-.=+......++|+|++|.|||.=.. +++.|++. +-.=+..+++......+|+-
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G-----~~tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDG-----ETTGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCC-----ccceeecCChHHHHHHHHHHH
Confidence 56678899999999888787788999999999999998543 34555432 12223334443333333333
Q ss_pred -CCHHHHHHHHHHHHhhhhee
Q 013815 387 -ISEKRYRRMQMRVKKVQQHF 406 (436)
Q Consensus 387 -Is~e~i~~Mr~~l~~v~~~f 406 (436)
...++...||++-++..-+|
T Consensus 423 ~~~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 KLNYDERNMMRRNARKSLARF 443 (465)
T ss_pred HcCHHHHHHHHHHHHHHHHHh
Confidence 25666788888776654443
No 57
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=89.26 E-value=1.4 Score=44.54 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=60.4
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCC-h-hhHHHHHhcCCH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKD-I-PNLKNILLSISE 389 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~d-v-~~l~~iL~~Is~ 389 (436)
..+....++.+..++.|........-+.|||.+| +|||.++.--++ +.+.-....+.++..+ + ..|.+.|. ++
T Consensus 264 ~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a~~i~~ll~--~~ 338 (372)
T cd03792 264 DLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAAVRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHHHHHHHHHc--CH
Confidence 3566788899999999876655678999999999 599998854333 3333233333444322 1 23444443 46
Q ss_pred HHHHHHHHHHHhh-hheeeecC
Q 013815 390 KRYRRMQMRVKKV-QQHFLWHP 410 (436)
Q Consensus 390 e~i~~Mr~~l~~v-~~~f~y~~ 410 (436)
+...+|.++.++. ...|.|..
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~~ 360 (372)
T cd03792 339 ELRRKMGANAREHVRENFLITR 360 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHHH
Confidence 7778888887764 45665543
No 58
>PLN02949 transferase, transferring glycosyl groups
Probab=86.90 E-value=1.7 Score=46.54 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=58.9
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCC-CCC-cEEEEEcCCChhhHHHHHhcC---
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEIL-NWE-SFAVFVLEKDIPNLKNILLSI--- 387 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~i-Dw~-~fsV~Ipe~dv~~l~~iL~~I--- 387 (436)
.+..+.+.++.+++.|.-......-+.|||++||+||.-... =|-++++ ++. .-.-++. .++..+.+.+..+
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHHHHHHHHHHHHhC
Confidence 567788899999888876666678899999999988875432 1322322 111 1111122 2555444444332
Q ss_pred CHHHHHHHHHHHHhhhheeeecC
Q 013815 388 SEKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 388 s~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
++++..+|+++.++...+|.++.
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~ 445 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQR 445 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHH
Confidence 56777889888877666665543
No 59
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=86.76 E-value=1.7 Score=46.23 Aligned_cols=94 Identities=16% Similarity=0.100 Sum_probs=63.7
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCC------CcEEEEEcCCChhhHHHHHh
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNW------ESFAVFVLEKDIPNLKNILL 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw------~~fsV~Ipe~dv~~l~~iL~ 385 (436)
..+..+.|..+..++.|.-.......++|||++|| |||.+|.-- ..++++- ....+.++..+...+.+.+.
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~--~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~ 437 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGS--CRELIEGADDEALGPAGEVVPPADPEALARAIL 437 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCC--hHHHhcCCcccccCCceEEECCCCHHHHHHHHH
Confidence 56778889999999988644444678999999999 888876421 1222322 23677788888776666555
Q ss_pred cC--CHHHHHHHHHHHHh-hhheeee
Q 013815 386 SI--SEKRYRRMQMRVKK-VQQHFLW 408 (436)
Q Consensus 386 ~I--s~e~i~~Mr~~l~~-v~~~f~y 408 (436)
.+ +++...+|.++.++ +...|.|
T Consensus 438 ~ll~~~~~~~~~~~~a~~~v~~~~s~ 463 (475)
T cd03813 438 RLLKDPELRRAMGEAGRKRVERYYTL 463 (475)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhCCH
Confidence 53 57778888887775 3444433
No 60
>PHA01633 putative glycosyl transferase group 1
Probab=86.55 E-value=1.5 Score=45.20 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=35.8
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
..+..+.++.+.+.+.|.-......-+.|||++|| |||.++-
T Consensus 214 ~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 214 REYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 45677899999999999777667889999999999 9998864
No 61
>PHA01630 putative group 1 glycosyl transferase
Probab=85.27 E-value=2.1 Score=43.65 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=32.8
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecC
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISD 353 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd 353 (436)
..+..+.++.++.++.|.-......-+.|||++|| |||.++
T Consensus 200 ~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~ 240 (331)
T PHA01630 200 DDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTE 240 (331)
T ss_pred HHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeC
Confidence 46778899999999998755555778999999998 556565
No 62
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=84.94 E-value=5.9 Score=43.86 Aligned_cols=64 Identities=17% Similarity=0.055 Sum_probs=45.4
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhh
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPN 379 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~ 379 (436)
.+..+.|..+..++.|.-.......+.|||.+|| |||.++.--.| +.|.-..-.+.++..|...
T Consensus 464 ~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 464 RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCChhh
Confidence 4566778888988888656656789999999999 99988753332 3343345566677776543
No 63
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=80.29 E-value=4.2 Score=47.97 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=64.2
Q ss_pred hhHHHhhccc----cEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC-
Q 013815 313 MDYIQHMKSS----KYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 313 ~~y~~~m~~S----~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
.+..+.++.+ ..++.|.=..+...-+.|||++|| |||.++.- ...++|.-..-.+.|+..+...|.+.|..+
T Consensus 559 edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL 635 (1050)
T TIGR02468 559 SDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLV 635 (1050)
T ss_pred HHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHh
Confidence 3444555544 355556555556789999999995 99988743 233455445667788888887766666554
Q ss_pred -CHHHHHHHHHHHHhhhheeeecC
Q 013815 388 -SEKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 388 -s~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
.++...+|.++.++..+.|.|..
T Consensus 636 ~Dpelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 636 ADKQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred hCHHHHHHHHHHHHHHHHHCCHHH
Confidence 46778889988877666676654
No 64
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=79.18 E-value=2.5 Score=46.78 Aligned_cols=110 Identities=15% Similarity=0.284 Sum_probs=70.1
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCC-C-CCCC-CCCcEEEEEcC-------CChhhHHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPP-F-FEIL-NWESFAVFVLE-------KDIPNLKN 382 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LP-F-e~~i-Dw~~fsV~Ipe-------~dv~~l~~ 382 (436)
..|.+.++.+.-++.|.-..+++.-..|||++| +|||.++.--++ + .+++ +-....+.|.. +.+..|.+
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 568899999999999988888889999999999 599998864332 0 1222 33356777763 22334444
Q ss_pred HHhc---CCHHHHHHHHHHHHhhhheeeecCCCCCc-cHHHHHHH
Q 013815 383 ILLS---ISEKRYRRMQMRVKKVQQHFLWHPQPVKY-DIFHMLLH 423 (436)
Q Consensus 383 iL~~---Is~e~i~~Mr~~l~~v~~~f~y~~~~~~~-DAFd~~l~ 423 (436)
.|.. .+..+....|..-.++...|.|..-...| .|.+.+|.
T Consensus 545 ~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 545 YMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 4444 23334444343334778888887643333 46666553
No 65
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=79.12 E-value=2.5 Score=35.87 Aligned_cols=69 Identities=16% Similarity=0.120 Sum_probs=40.7
Q ss_pred hhHHHhhccccEEEeeCC-CCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc
Q 013815 313 MDYIQHMKSSKYCICAKG-YEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS 386 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~G-d~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~ 386 (436)
.++.+.++++..+++|.- +...+..++|++.+||-+|. ++. ++...+.-....+.+ ..+..++.+.|..
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~-~~~---~~~~~~~~~~~~~~~-~~~~~~l~~~i~~ 131 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIA-SDN---GAEGIVEEDGCGVLV-ANDPEELAEAIER 131 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEE-EHH---HCHCHS---SEEEE--TT-HHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEE-CCc---chhhheeecCCeEEE-CCCHHHHHHHHHH
Confidence 478999999999999973 22357899999999985555 444 444444335566666 6676666655543
No 66
>PLN02939 transferase, transferring glycosyl groups
Probab=78.89 E-value=6.2 Score=46.19 Aligned_cols=91 Identities=14% Similarity=0.211 Sum_probs=59.5
Q ss_pred HHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCC--------cEEEEEcCCChhhHHHHHhc-
Q 013815 316 IQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWE--------SFAVFVLEKDIPNLKNILLS- 386 (436)
Q Consensus 316 ~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~--------~fsV~Ipe~dv~~l~~iL~~- 386 (436)
...++.+.++++|.=..+...-+.|||++||+||+...+- ++ +-+.|++ .-.+.++..+...+.+.|..
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 4689999999999877888899999999999999754321 11 1122322 23556677777655444432
Q ss_pred ---C--CHHHHHHHHHHHHhhhheeeecC
Q 013815 387 ---I--SEKRYRRMQMRVKKVQQHFLWHP 410 (436)
Q Consensus 387 ---I--s~e~i~~Mr~~l~~v~~~f~y~~ 410 (436)
+ .++...+|+++. +...|.|..
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 2 477788887653 335566654
No 67
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=77.77 E-value=5 Score=39.72 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=51.1
Q ss_pred hHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCC-----CCCCCCcEEEEEcCCC--hhhHHHHHhc
Q 013815 314 DYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFF-----EILNWESFAVFVLEKD--IPNLKNILLS 386 (436)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe-----~~iDw~~fsV~Ipe~d--v~~l~~iL~~ 386 (436)
++.+.|..+..++.+.| ..-++|||.+|+ |||+.+.-.-+-+ +.+......+.++..+ ...|.+.|+.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 78899999999998766 246999999996 6666531100000 1233345556676654 5555444443
Q ss_pred C--CHHHHHHHHHHHHh
Q 013815 387 I--SEKRYRRMQMRVKK 401 (436)
Q Consensus 387 I--s~e~i~~Mr~~l~~ 401 (436)
+ +++...+|.++.++
T Consensus 318 ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLLDPANLEAMAEAARK 334 (348)
T ss_pred HHcCHHHHHHHHHHHHh
Confidence 2 46777778776644
No 68
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=76.64 E-value=25 Score=34.92 Aligned_cols=143 Identities=16% Similarity=0.126 Sum_probs=84.5
Q ss_pred CCCCCCceEEEeeccCCCC-chHHHHhHhhcCCCCc--EEEecccCCcCCCCCCCCcc--cCCchhHHHhhccccEEEee
Q 013815 254 KPASQRSILAFFAGRMHGY-LRPILLHHWENKDPDM--KIFGQMPMVKGKGKGKGKGK--RKGKMDYIQHMKSSKYCICA 328 (436)
Q Consensus 254 ~~~~~R~~L~fFaG~~~G~-iR~~L~~~~~~~~~~~--~i~~~c~~~~g~~~c~g~~~--~~~~~~y~~~m~~S~FCL~P 328 (436)
.+-.+|.-.++|+|+..+. .|..|++...+....+ .+...|.. .+|..... .... .-++...+.||=+..
T Consensus 78 ~pW~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~yKyli~~ 152 (256)
T smart00672 78 TKWSDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDWP----GKCDGEEDAPGFKK-SPLEEQCKHKYKINI 152 (256)
T ss_pred CCccccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecCC----CCChHHhcccCcCC-CCHHHHhhcceEEec
Confidence 4557788999999999876 8999987655532123 34333311 12321100 0111 235566789999999
Q ss_pred CCCCCCchhHHHHHhcCceeEEecCCccCCCCC-CCCCCcEEEEEcC--CC--hhhHHHHHhcCCHHHHHHHHHHHHhhh
Q 013815 329 KGYEVNSPRVVEAIFYECVPVIISDNFVPPFFE-ILNWESFAVFVLE--KD--IPNLKNILLSISEKRYRRMQMRVKKVQ 403 (436)
Q Consensus 329 ~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~-~iDw~~fsV~Ipe--~d--v~~l~~iL~~Is~e~i~~Mr~~l~~v~ 403 (436)
.|.+. |-|+.--|.++++++.....+.-=|.+ ..+|.-|. -|.. ++ +.+..+.+++ .+++.+++-++..+..
T Consensus 153 dG~~~-S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~~i~~~~~-~~~~a~~Ia~~~~~~~ 229 (256)
T smart00672 153 EGVAW-SVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKEAVDWGNE-HDKKAQEIGKRGSEFI 229 (256)
T ss_pred CCccc-hhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 99985 789999999999999987543322222 23455553 2222 23 5555555554 3455555555555543
Q ss_pred h
Q 013815 404 Q 404 (436)
Q Consensus 404 ~ 404 (436)
+
T Consensus 230 ~ 230 (256)
T smart00672 230 Q 230 (256)
T ss_pred H
Confidence 3
No 69
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=74.28 E-value=10 Score=38.86 Aligned_cols=80 Identities=18% Similarity=0.266 Sum_probs=49.8
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCC------CCCCcEEEEEcCCChhhHHHHHhc
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEI------LNWESFAVFVLEKDIPNLKNILLS 386 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~------iDw~~fsV~Ipe~dv~~l~~iL~~ 386 (436)
.+..+.|..|...+.++|.. .+.|||.+|| |||+.+. .|-++. ++ ....+.+ .+...|.+.+..
T Consensus 274 ~~~~~l~~aaDv~V~~~g~~----ti~EAma~g~-PvI~~~~--~pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~ 343 (382)
T PLN02605 274 TNMEEWMGACDCIITKAGPG----TIAEALIRGL-PIILNGY--IPGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAE 343 (382)
T ss_pred ccHHHHHHhCCEEEECCCcc----hHHHHHHcCC-CEEEecC--CCccchhhHHHHHh-CCceeec--CCHHHHHHHHHH
Confidence 36789999999988877632 4899999997 6666652 233332 22 3344443 454444444443
Q ss_pred C--C-HHHHHHHHHHHHhh
Q 013815 387 I--S-EKRYRRMQMRVKKV 402 (436)
Q Consensus 387 I--s-~e~i~~Mr~~l~~v 402 (436)
+ . ++...+|+++.++.
T Consensus 344 ll~~~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 344 WFGDKSDELEAMSENALKL 362 (382)
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 3 2 67777888766543
No 70
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=69.53 E-value=12 Score=36.65 Aligned_cols=72 Identities=14% Similarity=0.046 Sum_probs=46.4
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
..+..+.+..+.++++|.-......-+.|||.+||-.|. ++.-. ..+.+.- ........++...+.+.+..+
T Consensus 257 ~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~-s~~~~--~~~~i~~-~~~~~~~~~~~~~~a~~i~~l 328 (358)
T cd03812 257 RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCIL-SDTIT--KEVDLTD-LVKFLSLDESPEIWAEEILKL 328 (358)
T ss_pred cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEE-EcCCc--hhhhhcc-CccEEeCCCCHHHHHHHHHHH
Confidence 456788999999999998766678899999999995554 55322 2223322 334444455555555555443
No 71
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=69.14 E-value=21 Score=36.88 Aligned_cols=84 Identities=18% Similarity=0.166 Sum_probs=52.0
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCC-----CCcEEEEEcCCChhhHHHHHhcC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILN-----WESFAVFVLEKDIPNLKNILLSI 387 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iD-----w~~fsV~Ipe~dv~~l~~iL~~I 387 (436)
.+..+.|..|.+++..+|. ..+.||+.+|+ |||+.+. .|-++..+ =..+.+.+. +...+.+.+..+
T Consensus 265 ~~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~--~pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~l 335 (391)
T PRK13608 265 KHMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNP--APGQELENALYFEEKGFGKIAD--TPEEAIKIVASL 335 (391)
T ss_pred chHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCC--CCCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHH
Confidence 4677899999999885542 35899999996 8887653 23332211 223444432 333444444332
Q ss_pred --CHHHHHHHHHHHHhhhhe
Q 013815 388 --SEKRYRRMQMRVKKVQQH 405 (436)
Q Consensus 388 --s~e~i~~Mr~~l~~v~~~ 405 (436)
.++.+.+|+++..+..+.
T Consensus 336 l~~~~~~~~m~~~~~~~~~~ 355 (391)
T PRK13608 336 TNGNEQLTNMISTMEQDKIK 355 (391)
T ss_pred hcCHHHHHHHHHHHHHhcCC
Confidence 578888999888776443
No 72
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.76 E-value=31 Score=30.69 Aligned_cols=40 Identities=13% Similarity=-0.035 Sum_probs=30.9
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISD 353 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd 353 (436)
..+...+..|..+++|......+..++|||.+||-.|. ++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~-s~ 212 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIA-TD 212 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEE-cC
Confidence 44455555699999999877788999999999875554 54
No 73
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=67.68 E-value=7.3 Score=39.77 Aligned_cols=68 Identities=12% Similarity=0.127 Sum_probs=41.7
Q ss_pred chhHHHhhccccEEEeeCCCC-----CCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc
Q 013815 312 KMDYIQHMKSSKYCICAKGYE-----VNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS 386 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~-----~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~ 386 (436)
..+..+.+..+..|+.|.-.+ .....++|+|++|+ |||.++ +.++.+...-.+.+ ..+..++.+.+..
T Consensus 264 ~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~-----~~~~~~~~~~~~~~-~~d~~~~~~ai~~ 336 (373)
T cd04950 264 YKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP-----LPEVRRYEDEVVLI-ADDPEEFVAAIEK 336 (373)
T ss_pred HHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC-----cHHHHhhcCcEEEe-CCCHHHHHHHHHH
Confidence 356788899999999996432 12357999999997 777554 22333333323333 3455554444444
No 74
>PLN00142 sucrose synthase
Probab=64.60 E-value=17 Score=42.10 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=59.9
Q ss_pred HHHhhcc-ccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh----c--C
Q 013815 315 YIQHMKS-SKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL----S--I 387 (436)
Q Consensus 315 y~~~m~~-S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~----~--I 387 (436)
....+.. +..+++|.=..+...-+.|||++|| |||.++.--++ ++|.-..-.+.|+..+...+.+.|. . -
T Consensus 659 Lyr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~~--EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~ 735 (815)
T PLN00142 659 LYRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGPA--EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKE 735 (815)
T ss_pred HHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC
Confidence 3444543 3455677656666789999999997 77777643222 3444455677788888765544432 2 2
Q ss_pred CHHHHHHHHHHHH-hhhheeeecC
Q 013815 388 SEKRYRRMQMRVK-KVQQHFLWHP 410 (436)
Q Consensus 388 s~e~i~~Mr~~l~-~v~~~f~y~~ 410 (436)
.++...+|.++.+ ++..+|.|..
T Consensus 736 Dp~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 736 DPSYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 5777888887764 4667888765
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=62.31 E-value=17 Score=37.56 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=57.1
Q ss_pred hhHHHhhccccEEEeeCCC-CCCchhHHHHHhcCceeEEecCCccCCCCCC---CCCCcEEEEEcCCChhhHHHHHhcC-
Q 013815 313 MDYIQHMKSSKYCICAKGY-EVNSPRVVEAIFYECVPVIISDNFVPPFFEI---LNWESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd-~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~---iDw~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
.+..+.+..+..|+++... .....-+.|||.+|| |||.+++.. -+.+. +.-..+.+. ..|...|.+.|..+
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~--~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQ--VEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEE--ECCHHHHHHHHHHHh
Confidence 4677888999987775332 113455999999996 888766421 11121 111233333 44555555544432
Q ss_pred -CHHHHHHHHHHHHhhhheeeecCCCCCccHHHHHHH
Q 013815 388 -SEKRYRRMQMRVKKVQQHFLWHPQPVKYDIFHMLLH 423 (436)
Q Consensus 388 -s~e~i~~Mr~~l~~v~~~f~y~~~~~~~DAFd~~l~ 423 (436)
+++...+|.++.++..... .++.+.+++
T Consensus 387 ~~~~~~~~m~~~a~~~~~~~--------~~~~~~~~~ 415 (425)
T PRK05749 387 TDPDARQAYGEAGVAFLKQN--------QGALQRTLQ 415 (425)
T ss_pred cCHHHHHHHHHHHHHHHHhC--------ccHHHHHHH
Confidence 4777788888776654331 246666665
No 76
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=61.21 E-value=12 Score=39.98 Aligned_cols=90 Identities=10% Similarity=0.024 Sum_probs=61.0
Q ss_pred CchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCce---eEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc-
Q 013815 311 GKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECV---PVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS- 386 (436)
Q Consensus 311 ~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCI---PViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~- 386 (436)
...+..+.++.+.-++.|.-......-..|||.+||= |||+++.--.+-+ ..-.+.|+..+...+.+.|..
T Consensus 350 ~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~ 424 (460)
T cd03788 350 PREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRA 424 (460)
T ss_pred CHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHH
Confidence 3567788899999999886554446778999999996 6898874322211 123677888887766655543
Q ss_pred --CCHHHHHHHHHHHHhhhhe
Q 013815 387 --ISEKRYRRMQMRVKKVQQH 405 (436)
Q Consensus 387 --Is~e~i~~Mr~~l~~v~~~ 405 (436)
.++++..+|.++.++....
T Consensus 425 l~~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 425 LTMPLEERRERHRKLREYVRT 445 (460)
T ss_pred HcCCHHHHHHHHHHHHHHHHh
Confidence 3667777777766665444
No 77
>PLN02316 synthase/transferase
Probab=60.78 E-value=22 Score=42.21 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=57.5
Q ss_pred HhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCC------------CcEEEEEcCCChhhHHHHH
Q 013815 317 QHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNW------------ESFAVFVLEKDIPNLKNIL 384 (436)
Q Consensus 317 ~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw------------~~fsV~Ipe~dv~~l~~iL 384 (436)
..++.+.+.++|.=..+......+||++||+||+-..+ =+| +-+.|+ ..-.+.++..+...|...|
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG-GL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL 992 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG-GLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL 992 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC-CcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHH
Confidence 68999999999988888899999999999999995432 111 112233 1346677777776544433
Q ss_pred hc-CC--HHHHHHHHHHHHh-hhheeeecCC
Q 013815 385 LS-IS--EKRYRRMQMRVKK-VQQHFLWHPQ 411 (436)
Q Consensus 385 ~~-Is--~e~i~~Mr~~l~~-v~~~f~y~~~ 411 (436)
.. +. .+....|++..++ +.+.|.|...
T Consensus 993 ~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 993 NRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 22 21 1223334444443 3456777653
No 78
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=59.47 E-value=23 Score=35.45 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=51.5
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccC------CCCCCCCCCcEEEEEcCCC--hhhHHHHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVP------PFFEILNWESFAVFVLEKD--IPNLKNIL 384 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~L------PFe~~iDw~~fsV~Ipe~d--v~~l~~iL 384 (436)
.++.+.|..++.+++..| ..-++|||.+|+--|++...... ..+.+.+ ....+.++.++ ...|.+.+
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~~l~~~i 318 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPEKLAEKL 318 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHHHHHHHH
Confidence 467899999999998766 24599999999755555321111 1112233 34577787766 44555555
Q ss_pred hcC--CHHHHHHHHHHHH
Q 013815 385 LSI--SEKRYRRMQMRVK 400 (436)
Q Consensus 385 ~~I--s~e~i~~Mr~~l~ 400 (436)
+.+ .++...+|+++.+
T Consensus 319 ~~ll~~~~~~~~~~~~~~ 336 (357)
T PRK00726 319 LELLSDPERLEAMAEAAR 336 (357)
T ss_pred HHHHcCHHHHHHHHHHHH
Confidence 443 3666677777643
No 79
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=55.63 E-value=26 Score=32.30 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=30.2
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
....+.+..+...+.|.-.......+.||+.+| +|||.++.
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~ 308 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDV 308 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCC
Confidence 455667777899999954322344599999999 99988764
No 80
>PLN02275 transferase, transferring glycosyl groups
Probab=54.58 E-value=52 Score=33.59 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=49.7
Q ss_pred ceEEEeeccCCCCchHHHHhHhhcC-CCCcEEEecccCCcCCCCCCCCcccCCchhHHHhhccccEEEeeCC----CCCC
Q 013815 260 SILAFFAGRMHGYLRPILLHHWENK-DPDMKIFGQMPMVKGKGKGKGKGKRKGKMDYIQHMKSSKYCICAKG----YEVN 334 (436)
Q Consensus 260 ~~L~fFaG~~~G~iR~~L~~~~~~~-~~~~~i~~~c~~~~g~~~c~g~~~~~~~~~y~~~m~~S~FCL~P~G----d~~~ 334 (436)
++-|.+.|. |..|..+.+..+.. -.++.+.+.. ....++.+.|..+..|+.|.. .+ .
T Consensus 261 ~i~l~ivG~--G~~~~~l~~~~~~~~l~~v~~~~~~---------------~~~~~~~~~l~~aDv~v~~~~s~~~e~-~ 322 (371)
T PLN02275 261 RLLFIITGK--GPQKAMYEEKISRLNLRHVAFRTMW---------------LEAEDYPLLLGSADLGVSLHTSSSGLD-L 322 (371)
T ss_pred CeEEEEEeC--CCCHHHHHHHHHHcCCCceEEEcCC---------------CCHHHHHHHHHhCCEEEEecccccccc-c
Confidence 477888885 66777776665542 1234443211 124678889999999987632 22 2
Q ss_pred chhHHHHHhcCceeEEecC
Q 013815 335 SPRVVEAIFYECVPVIISD 353 (436)
Q Consensus 335 s~Rl~dAi~~GCIPViisd 353 (436)
...++|||++|| |||.++
T Consensus 323 p~~llEAmA~G~-PVVa~~ 340 (371)
T PLN02275 323 PMKVVDMFGCGL-PVCAVS 340 (371)
T ss_pred cHHHHHHHHCCC-CEEEec
Confidence 467999999996 888776
No 81
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=54.44 E-value=74 Score=36.25 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=53.8
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCCh--h----hHHHHHhc
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDI--P----NLKNILLS 386 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv--~----~l~~iL~~ 386 (436)
.+....|..+...+.|.-......-+.|||.+|| |||.++.--. .++|.-..-.+.++..+. + .|.+.|..
T Consensus 583 ~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG~--~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 583 RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGGA--GEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred chHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCCh--HHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 3566778888888877555556789999999996 7777774322 234433445666776553 2 34444443
Q ss_pred CCHHHHHHHHHHHHh-hhheeeec
Q 013815 387 ISEKRYRRMQMRVKK-VQQHFLWH 409 (436)
Q Consensus 387 Is~e~i~~Mr~~l~~-v~~~f~y~ 409 (436)
.. .-.+|+++.++ +..+|.|.
T Consensus 660 l~--~~~~l~~~ar~~a~~~FS~~ 681 (694)
T PRK15179 660 CA--ADPGIARKAADWASARFSLN 681 (694)
T ss_pred hh--ccHHHHHHHHHHHHHhCCHH
Confidence 22 12345555543 34455443
No 82
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=52.72 E-value=43 Score=33.15 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=29.1
Q ss_pred CCchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEe
Q 013815 310 KGKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVII 351 (436)
Q Consensus 310 ~~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPVii 351 (436)
....+..+.|..+...++..| + .++|++.+| +|+|+
T Consensus 230 ~~~~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~ 265 (279)
T TIGR03590 230 IDVENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLA 265 (279)
T ss_pred eCHHHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEE
Confidence 345678899999999999766 2 299999999 67775
No 83
>PRK10125 putative glycosyl transferase; Provisional
Probab=52.38 E-value=41 Score=35.24 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=51.0
Q ss_pred CchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHH
Q 013815 311 GKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNI 383 (436)
Q Consensus 311 ~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~i 383 (436)
+..+..+.++.+...+.|.-......-+.|||++|| |||.+|-=-.| ++++-. -.+.++..|+..|.+.
T Consensus 296 ~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~gG~~--Eiv~~~-~G~lv~~~d~~~La~~ 364 (405)
T PRK10125 296 DKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSDAAR--EVLQKS-GGKTVSEEEVLQLAQL 364 (405)
T ss_pred CHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCCChH--HhEeCC-cEEEECCCCHHHHHhc
Confidence 446678888889988888766666788999999995 88887743333 345433 5788899998877753
No 84
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=52.30 E-value=39 Score=36.25 Aligned_cols=85 Identities=12% Similarity=0.090 Sum_probs=57.0
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCcee----EEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhc-
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVP----VIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLS- 386 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIP----Viisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~- 386 (436)
..+....++.+.-|++|+=......-..|||++|+ | ||+++.-=.+ +.+. -++.|+..|...+.+.|..
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 56788889999999997644434677999999996 7 8888743222 1122 3678888888766665533
Q ss_pred --CCHHHHHHHHHHHHhh
Q 013815 387 --ISEKRYRRMQMRVKKV 402 (436)
Q Consensus 387 --Is~e~i~~Mr~~l~~v 402 (436)
.++++..++.+++++.
T Consensus 420 L~~~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 420 LTMPLEEREERHRAMMDK 437 (456)
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 3566666555555443
No 85
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=50.11 E-value=27 Score=34.48 Aligned_cols=84 Identities=15% Similarity=0.194 Sum_probs=51.9
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC-c------cCCCCCCCCCCcEEEEEcCC--ChhhHHHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN-F------VPPFFEILNWESFAVFVLEK--DIPNLKNI 383 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~-~------~LPFe~~iDw~~fsV~Ipe~--dv~~l~~i 383 (436)
.++.+.|..+++.+++.|. .-+.|||.+|+- ||+.+. . ..+.+.+.+ ....+.++.. +...|.+.
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~P-vv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~l~~~ 317 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGLP-AILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPERLAAA 317 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCCC-EEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHHHHHH
Confidence 5778899999999987762 348999999975 554331 1 111122223 3456666655 56555555
Q ss_pred HhcC--CHHHHHHHHHHHHhh
Q 013815 384 LLSI--SEKRYRRMQMRVKKV 402 (436)
Q Consensus 384 L~~I--s~e~i~~Mr~~l~~v 402 (436)
++.+ +++...+|+++.++.
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 318 LLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred HHHHhcCHHHHHHHHHHHHhc
Confidence 5443 467777788766543
No 86
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=50.10 E-value=56 Score=35.47 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=56.2
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcC----CC----hhhHHHH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLE----KD----IPNLKNI 383 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe----~d----v~~l~~i 383 (436)
..+..+.+..+.-++.|.=.......+.|||.+|| |||.+|--.-| .++|.=..-.+.++. .+ +..|.+.
T Consensus 383 ~~~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~-~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~ 460 (500)
T TIGR02918 383 HRNLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN-PTFIEDNKNGYLIPIDEEEDDEDQIITALAEK 460 (500)
T ss_pred CCCHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC-HHHccCCCCEEEEeCCccccchhHHHHHHHHH
Confidence 34566778888877777644445788999999997 66666621111 233432333344441 22 3333333
Q ss_pred Hhc-CCHHHHHHHHHHHHhhhheeee
Q 013815 384 LLS-ISEKRYRRMQMRVKKVQQHFLW 408 (436)
Q Consensus 384 L~~-Is~e~i~~Mr~~l~~v~~~f~y 408 (436)
+.. +.++++.+|.++..+....|.|
T Consensus 461 I~~ll~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 461 IVEYFNSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHhChHHHHHHHHHHHHHHHhcCH
Confidence 222 2466788998888887776554
No 87
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=49.93 E-value=44 Score=38.56 Aligned_cols=93 Identities=10% Similarity=0.088 Sum_probs=60.9
Q ss_pred HHhhcc-ccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC------C
Q 013815 316 IQHMKS-SKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI------S 388 (436)
Q Consensus 316 ~~~m~~-S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I------s 388 (436)
...++. ...+++|.=..+...-+.|||++||-+ |.++.=-++ +.|.-..-.+.|+..+...+.+.|..+ .
T Consensus 637 yr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPV-VAT~~GG~~--EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~d 713 (784)
T TIGR02470 637 YRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPT-FATRFGGPL--EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDED 713 (784)
T ss_pred HHHhhccCcEEEECCcccCCCHHHHHHHHcCCCE-EEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 333443 356677877777789999999999855 445532222 334335567778888877655555432 5
Q ss_pred HHHHHHHHHHHH-hhhheeeecCC
Q 013815 389 EKRYRRMQMRVK-KVQQHFLWHPQ 411 (436)
Q Consensus 389 ~e~i~~Mr~~l~-~v~~~f~y~~~ 411 (436)
++...+|.++.+ ++..+|.|...
T Consensus 714 p~~~~~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 714 PSYWQKISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 778888888765 46788888763
No 88
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=47.88 E-value=62 Score=32.79 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=46.0
Q ss_pred hHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCC-----CCCCCcEEEEEcCCChhhHHHHHhcC-
Q 013815 314 DYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFE-----ILNWESFAVFVLEKDIPNLKNILLSI- 387 (436)
Q Consensus 314 ~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~-----~iDw~~fsV~Ipe~dv~~l~~iL~~I- 387 (436)
+..+.|..|...+..+| ..-+.|||.+|+ |||+.+. .|-++ .+.-..+.+.+ .+...|.+.+..+
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~--~~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKP--VPGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCC--CCCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHH
Confidence 46688889987655333 345899999997 5776542 12111 11112344433 4445454444433
Q ss_pred -CHHHHHHHHHHHHhh
Q 013815 388 -SEKRYRRMQMRVKKV 402 (436)
Q Consensus 388 -s~e~i~~Mr~~l~~v 402 (436)
.++.+.+|+++..++
T Consensus 337 ~~~~~~~~m~~~~~~~ 352 (380)
T PRK13609 337 QDDMKLLQMKEAMKSL 352 (380)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 467788888876553
No 89
>PRK14762 membrane protein; Provisional
Probab=47.85 E-value=13 Score=24.35 Aligned_cols=15 Identities=27% Similarity=0.565 Sum_probs=12.0
Q ss_pred hhhhHhhhHHHHHhh
Q 013815 14 KRLLWLMGIMLTVIV 28 (436)
Q Consensus 14 ~~~~~~~~~~~~~~~ 28 (436)
|-++|.|+|.|-|-|
T Consensus 2 ki~lw~i~iifligl 16 (27)
T PRK14762 2 KIILWAVLIIFLIGL 16 (27)
T ss_pred eeHHHHHHHHHHHHH
Confidence 568999999987654
No 90
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=47.11 E-value=2.1e+02 Score=28.75 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=52.7
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC-ccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--C
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN-FVPPFFEILNWESFAVFVLEKDIPNLKNILLSI--S 388 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~-~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~~I--s 388 (436)
..++...|..+.+++.+.|. -+.||+.+|| |||...+ -..| +.+. ....+.++ .+...|.+.+..+ .
T Consensus 265 ~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~~~~~~~--e~~~-~g~~~lv~-~d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLRDTTERP--ETVE-AGTNKLVG-TDKENITKAAKRLLTD 334 (365)
T ss_pred hHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECCCCCCCh--HHHh-cCceEEeC-CCHHHHHHHHHHHHhC
Confidence 45688899999998877643 2799999986 7776532 2222 3333 33444554 4555555444432 3
Q ss_pred HHHHHHHHHHHHhhhheeeecCCCCCccHHHHHHHHH
Q 013815 389 EKRYRRMQMRVKKVQQHFLWHPQPVKYDIFHMLLHSI 425 (436)
Q Consensus 389 ~e~i~~Mr~~l~~v~~~f~y~~~~~~~DAFd~~l~~l 425 (436)
++...+|.++. .+.+..+|...+++.|
T Consensus 335 ~~~~~~~~~~~----------~~~g~~~a~~ri~~~l 361 (365)
T TIGR00236 335 PDEYKKMSNAS----------NPYGDGEASERIVEEL 361 (365)
T ss_pred hHHHHHhhhcC----------CCCcCchHHHHHHHHH
Confidence 44444444311 1123455777777644
No 91
>TIGR00867 deg-1 degenerin. This model is designed from the invertebrate members of the ENaC family.
Probab=41.12 E-value=30 Score=38.61 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=46.8
Q ss_pred chhhhHhhhHHHHHhhh--------hhccccCccchhhhhccCCCCCCCCcc---ccccccCC---cchHHHHHHh---h
Q 013815 13 TKRLLWLMGIMLTVIVA--------FQYFELPYDHVLSSVFSTGKVPAPAVE---NNSLVTGG---LESKSEIASD---A 75 (436)
Q Consensus 13 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~---~ 75 (436)
..|++|++-+.+++.++ -+|++-|=-+-+...| +++|=|++| .|.++.+- .|.+++.... +
T Consensus 21 ~~R~~W~~~~l~~~~~~~~~~~~~i~~y~~~p~v~~i~~~~--~~~~FPaVTICnlN~~r~s~~~~~~~~~~~~~~~~~~ 98 (601)
T TIGR00867 21 WSRYFWVALFLFCLLMFAYQAYILISKYNRYEKIVDIELKF--ETAPFPAITVCNLNPYKYSLARSVPAISETLDAFERA 98 (601)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeEeeecc--cCCCCCEEEecCCCcchhhhhccCchHHHHHHHHHHH
Confidence 47999999888666554 4688888877777776 488888888 34555553 3455544333 6
Q ss_pred hcCCCCCCCC
Q 013815 76 VNGLNSTGTH 85 (436)
Q Consensus 76 ~~~~~~~~~~ 85 (436)
|+..|.+..+
T Consensus 99 ~~~~~~~~~~ 108 (601)
T TIGR00867 99 IDKSNKSEGD 108 (601)
T ss_pred hhhccccccc
Confidence 6666544433
No 92
>PF10617 DUF2474: Protein of unknown function (DUF2474); InterPro: IPR018895 This family of short proteins has no known function.
Probab=38.44 E-value=24 Score=25.60 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=13.2
Q ss_pred hhhhHhhhHHHHHhhhh
Q 013815 14 KRLLWLMGIMLTVIVAF 30 (436)
Q Consensus 14 ~~~~~~~~~~~~~~~~~ 30 (436)
|||.|+++|=.+-+++.
T Consensus 6 kRl~W~v~iW~~SV~aL 22 (40)
T PF10617_consen 6 KRLGWFVLIWAASVLAL 22 (40)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999976655543
No 93
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=35.09 E-value=47 Score=33.48 Aligned_cols=86 Identities=15% Similarity=0.219 Sum_probs=48.3
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCC----CCCCcEE--------------EEEcC
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEI----LNWESFA--------------VFVLE 374 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~----iDw~~fs--------------V~Ipe 374 (436)
.+..+.+..+..++++.|. -..||+.+|| |||+.... -||... +....+. +..++
T Consensus 253 ~~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 325 (380)
T PRK00025 253 GQKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKV-SPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEE 325 (380)
T ss_pred ccHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEcc-CHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCC
Confidence 3567889999999998653 3459999997 66665433 122200 0011111 11123
Q ss_pred CChhhHHHHHhcC--CHHHHHHHHHHHHhhhhe
Q 013815 375 KDIPNLKNILLSI--SEKRYRRMQMRVKKVQQH 405 (436)
Q Consensus 375 ~dv~~l~~iL~~I--s~e~i~~Mr~~l~~v~~~ 405 (436)
.+...|.+.+..+ .++...+|.++..++.+.
T Consensus 326 ~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~ 358 (380)
T PRK00025 326 ATPEKLARALLPLLADGARRQALLEGFTELHQQ 358 (380)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3334454444433 567777888887666554
No 94
>PF00858 ASC: Amiloride-sensitive sodium channel; InterPro: IPR001873 The apical membrane of many tight epithelia contains sodium channels that are primarily characterised by their high affinity to the diuretic blocker amiloride [, , , ]. These channels mediate the first step of active sodium reabsorption essential for the maintenance of body salt and water homeostasis []. In vertebrates, the channels control reabsorption of sodium in kidney, colon, lung and sweat glands; they also play a role in taste perception. Members of the epithelial Na+ channel (ENaC) family fall into four subfamilies, termed alpha, beta, gamma and delta []. The proteins exhibit the same apparent topology, each with two transmembrane (TM) spanning segments, separated by a large extracellular loop. In most ENaC proteins studied to date, the extracellular domains are highly conserved and contain numerous cysteine residues, with flanking C-terminal amphipathic TM regions, postulated to contribute to the formation of the hydrophilic pores of the oligomeric channel protein complexes. It is thought that the well-conserved extracellular domains serve as receptors to control the activities of the channels. Vertebrate ENaC proteins are similar to degenerins of Caenorhabditis elegans []: deg-1, del-1, mec-4, mec-10 and unc-8. These proteins can be mutated to cause neuronal degradation, and are also thought to form sodium channels. Structurally, the proteins that belong to this family consist of about 510 to 920 amino acid residues. They are made of an intracellular N terminus region followed by a transmembrane domain, a large extracellular loop, a second transmembrane segment and a C-terminal intracellular tail [].; GO: 0005272 sodium channel activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 2QTS_B 3S3W_C 3IJ4_A 3S3X_A 3HGC_A 2K2B_A.
Probab=31.88 E-value=19 Score=36.84 Aligned_cols=43 Identities=26% Similarity=0.637 Sum_probs=30.1
Q ss_pred hhhhHhhhHHHHHhhh--------hhccccCccchhhhhccCCCCCCCCccc
Q 013815 14 KRLLWLMGIMLTVIVA--------FQYFELPYDHVLSSVFSTGKVPAPAVEN 57 (436)
Q Consensus 14 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (436)
.|++|++-+.++++++ -.|++-|--+.+...+.. ++|=|+++=
T Consensus 22 ~R~~W~~~~~~~~~~~~~~~~~~~~~y~~~p~~~~i~~~~~~-~~~FPaVTI 72 (439)
T PF00858_consen 22 ERLFWLLVVVVSFILFIYQIYLLIERYLSYPTSTTIETDYNP-NIPFPAVTI 72 (439)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEEEEEE--S-SEE--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEeeecccc-cccCCeEEE
Confidence 4999998887776654 369999999999887777 999999974
No 95
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=29.66 E-value=46 Score=32.25 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=28.1
Q ss_pred cccEEEeeCCCCCCchhHHHHHhcCceeEEec
Q 013815 321 SSKYCICAKGYEVNSPRVVEAIFYECVPVIIS 352 (436)
Q Consensus 321 ~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViis 352 (436)
.-+|||+..|.+..-...||+=..+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 44799999999988899999999999999843
No 96
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=27.22 E-value=1.4e+02 Score=34.49 Aligned_cols=90 Identities=8% Similarity=-0.053 Sum_probs=56.5
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCce---eEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh---
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECV---PVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL--- 385 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCI---PViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~--- 385 (436)
..++...++.+.-|++|+=......-..|+|++|+- ++|+++--=-+- .+ ..-++.|+..|...+.+.+.
T Consensus 366 ~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~--~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 366 FNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQ--SL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchh--hh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 367788999999999987433335669999999983 277776321111 12 33588898888876555442
Q ss_pred cCCHHHHHHHHHHHHhhhhe
Q 013815 386 SISEKRYRRMQMRVKKVQQH 405 (436)
Q Consensus 386 ~Is~e~i~~Mr~~l~~v~~~ 405 (436)
..++++..++.+.+.+....
T Consensus 442 ~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 442 NMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred hCCHHHHHHHHHHHHHhhhh
Confidence 23556555555545444333
No 97
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=26.64 E-value=2.5e+02 Score=29.57 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=76.4
Q ss_pred CCCCCCCceEEEeeccCCCC-chHHHHhHhhcCCC--CcEEEecccCCcCCCCCCCCcccCCchhHHHhhccccEEEeeC
Q 013815 253 GKPASQRSILAFFAGRMHGY-LRPILLHHWENKDP--DMKIFGQMPMVKGKGKGKGKGKRKGKMDYIQHMKSSKYCICAK 329 (436)
Q Consensus 253 ~~~~~~R~~L~fFaG~~~G~-iR~~L~~~~~~~~~--~~~i~~~c~~~~g~~~c~g~~~~~~~~~y~~~m~~S~FCL~P~ 329 (436)
..+-.+|.-.+||+|+..+. .|..|++.-.+... +..+....... .. .......-++...+.||-+...
T Consensus 151 ~~pW~~K~p~afWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~---~~-----~~~~~~~~l~~~~~yKYli~id 222 (395)
T PF05686_consen 151 RVPWEDKKPKAFWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDK---EY-----KPGFKHVPLEDQCKYKYLIYID 222 (395)
T ss_pred CCChhhcccceEECCCcCCCcchhHHHHHhccCCccceeeechhhhhh---hc-----cccccccCHHHHhhhheeecCC
Confidence 34556788899999999754 59888764333211 22222111000 00 0011122356667889999999
Q ss_pred CCCCCchhHHHHHhcCceeEEecCCccCCCCC-CCCCCcEEEEEcC-CChhhHHHHHhcC--CHHHHHHHHHHHHh
Q 013815 330 GYEVNSPRVVEAIFYECVPVIISDNFVPPFFE-ILNWESFAVFVLE-KDIPNLKNILLSI--SEKRYRRMQMRVKK 401 (436)
Q Consensus 330 Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~-~iDw~~fsV~Ipe-~dv~~l~~iL~~I--s~e~i~~Mr~~l~~ 401 (436)
|.+. |-|+.--|.+|++.+.....+.-=|.+ ..+|.-|. -|.. ++..+|.+.++=. .+++.+++-++..+
T Consensus 223 G~~~-S~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYV-PV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~ 296 (395)
T PF05686_consen 223 GNAW-SGRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYV-PVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQR 296 (395)
T ss_pred Ccee-ehhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEE-EeccccchhhHHHHhhhcccChHHHHHHHHHHHH
Confidence 9985 789999999999999876543322222 34566553 3333 3444444444322 23444444444433
No 98
>PF15582 Imm40: Immunity protein 40
Probab=25.51 E-value=76 Score=32.20 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=38.3
Q ss_pred hhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCCCCCCCCcEEEEEcCCChhhHHHHHh-cCCHHH
Q 013815 313 MDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILL-SISEKR 391 (436)
Q Consensus 313 ~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe~~iDw~~fsV~Ipe~dv~~l~~iL~-~Is~e~ 391 (436)
....+++++|+||+|---...++. ..||+|+ ..|+..|..+.-..+..+++ +|-+.+
T Consensus 260 ~~~Y~LF~DSTF~F~NiNG~~~~~-------------------~Im~~D~---~~Ysf~vs~~~s~~v~~Iyn~GIYDK~ 317 (327)
T PF15582_consen 260 MKMYDLFCDSTFCFCNINGTHTRF-------------------SIMHSDI---DNYSFDVSDNSSKIVRWIYNRGIYDKE 317 (327)
T ss_pred HHHHHHhhhceEEEEEecCceeee-------------------eeeeccc---cceeeEEEecChHHHHHHHhcccccch
Confidence 456789999999999766665443 3477764 33444444333234555553 466666
Q ss_pred HHHHHH
Q 013815 392 YRRMQM 397 (436)
Q Consensus 392 i~~Mr~ 397 (436)
-.+||+
T Consensus 318 ~~~~~~ 323 (327)
T PF15582_consen 318 DRIRRF 323 (327)
T ss_pred hhhhhh
Confidence 666664
No 99
>PLN02501 digalactosyldiacylglycerol synthase
Probab=23.69 E-value=2.3e+02 Score=32.89 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=26.9
Q ss_pred HHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 316 IQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 316 ~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
.+.+..++..+.|.-......-+.|||++|| |||..+.
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~Gl-PVVATd~ 650 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAMGK-FVVCADH 650 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHcCC-CEEEecC
Confidence 3567777766666544444688999999997 7777764
No 100
>PLN02846 digalactosyldiacylglycerol synthase
Probab=23.57 E-value=2.9e+02 Score=29.93 Aligned_cols=37 Identities=14% Similarity=0.114 Sum_probs=26.8
Q ss_pred HhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCC
Q 013815 317 QHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDN 354 (436)
Q Consensus 317 ~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~ 354 (436)
+.+..++.++.|.-..-...-+.|||++|+ |||..|.
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-PVVa~~~ 332 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-IVVCANH 332 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCC-cEEEecC
Confidence 566666776666555445788999999996 7777764
No 101
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=23.19 E-value=4.6e+02 Score=27.33 Aligned_cols=83 Identities=18% Similarity=0.264 Sum_probs=56.1
Q ss_pred chhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecCCccCCCC---CC------CCCCcEEEEEcCCCh--hhH
Q 013815 312 KMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFF---EI------LNWESFAVFVLEKDI--PNL 380 (436)
Q Consensus 312 ~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd~~~LPFe---~~------iDw~~fsV~Ipe~dv--~~l 380 (436)
..++.+.|+.|.-++|=+|.+ -+.|+..+ ++|+|+- .+|.. +. +-=...+..+++.++ .+|
T Consensus 243 ~~dm~~~~~~ADLvIsRaGa~----Ti~E~~a~-g~P~Ili---P~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l 314 (357)
T COG0707 243 IDDMAALLAAADLVISRAGAL----TIAELLAL-GVPAILV---PYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKL 314 (357)
T ss_pred HhhHHHHHHhccEEEeCCccc----HHHHHHHh-CCCEEEe---CCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHH
Confidence 356788899999999987765 26666665 5898883 33332 00 112356889999884 366
Q ss_pred HHHHhcC--CHHHHHHHHHHHHhh
Q 013815 381 KNILLSI--SEKRYRRMQMRVKKV 402 (436)
Q Consensus 381 ~~iL~~I--s~e~i~~Mr~~l~~v 402 (436)
.+.|..+ +++++.+|.++...+
T Consensus 315 ~~~i~~l~~~~~~l~~m~~~a~~~ 338 (357)
T COG0707 315 AELILRLLSNPEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhc
Confidence 6666554 369999999987655
No 102
>smart00436 TOP1Bc Bacterial DNA topoisomeraes I ATP-binding domain. Extension of TOPRIM in Bacterial DNA topoisomeraes I and III, Eukaryotic DNA topoisomeraes III, reverse gyrase beta subunit
Probab=22.51 E-value=41 Score=28.16 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=24.3
Q ss_pred hhhHhhhHHHHHhhhhhccccCccchhhhhccCCCCCCCC
Q 013815 15 RLLWLMGIMLTVIVAFQYFELPYDHVLSSVFSTGKVPAPA 54 (436)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (436)
++=||+|+.+|-+++-.+-+ ..+|.|.+-||-
T Consensus 37 ~~D~l~G~n~Sr~~t~~~~~--------~~ls~GRVQtpt 68 (89)
T smart00436 37 ILDRLIGFNLSRLLTKKLRK--------GVLSAGRVQTPT 68 (89)
T ss_pred HHHHHHhHhhhHHHHHHhCC--------CCcceecchHHH
Confidence 34499999999988876543 368888888874
No 103
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=22.01 E-value=98 Score=33.83 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=36.7
Q ss_pred CchhHHHhhccccEEEeeCCCCCCchhHHHHHhcCceeEEecC
Q 013815 311 GKMDYIQHMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISD 353 (436)
Q Consensus 311 ~~~~y~~~m~~S~FCL~P~Gd~~~s~Rl~dAi~~GCIPViisd 353 (436)
+..-+.+..+.|.+=|+|.=..|-.-.-..||++|||||+-..
T Consensus 358 ~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~t 400 (487)
T COG0297 358 DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRET 400 (487)
T ss_pred cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEccc
Confidence 4566778889999999998777788889999999999999764
No 104
>TIGR02002 PTS-II-BC-glcB PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998).
Probab=21.09 E-value=99 Score=33.82 Aligned_cols=64 Identities=23% Similarity=0.388 Sum_probs=35.9
Q ss_pred hhHhhhHHHHHhhhhhccccCccchhhhhccCCCCCCCCccccccccCCcchHHHHHHhhhcCCCCCCCCccccc
Q 013815 16 LLWLMGIMLTVIVAFQYFELPYDHVLSSVFSTGKVPAPAVENNSLVTGGLESKSEIASDAVNGLNSTGTHNVHEM 90 (436)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (436)
+++++|+.++++..| ++.=++..-.++|||-+.+.-......+.+|.|.+++++++ |.+|+..+
T Consensus 381 ~~~~igi~~~~vy~f---------vf~~~I~k~~l~TpGRe~~~~~~~~~~~~~~~a~~ii~~lG--G~~NI~~v 444 (502)
T TIGR02002 381 LFIIVGIGYAIIYYF---------LFRFLIKKLNLKTPGREDATAEAKATGEPSELAFDVVAALG--GKENITSL 444 (502)
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHcCCCCCCCCccccccccccccchhHHHHHHHcC--CCcccccc
Confidence 455667776666554 34445667789999998531000011123467777777765 44554333
Done!