Your job contains 1 sequence.
>013817
MDCTYRKPLKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA
CQPGPRFNPESDESNASVVFLLDLSSIPLPSIWELLKELFVSPDILKLGFKFKQDLIYLS
STFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKEL
QCSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKG
ILEKPDIGNKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKY
GEKILLRECDKAPKTSKKKGRKRSSVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFL
CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQ
IYRVKSLLKNQQLLEV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013817
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152871 - symbol:AT5G24340 species:3702 "Arabi... 1242 1.8e-126 1
UNIPROTKB|F1Q045 - symbol:EXD3 "Uncharacterized protein" ... 179 2.2e-14 2
UNIPROTKB|E1BWV5 - symbol:EXD3 "Uncharacterized protein" ... 142 1.1e-13 3
UNIPROTKB|Q8N9H8 - symbol:EXD3 "Probable exonuclease mut-... 163 1.5e-12 2
ZFIN|ZDB-GENE-091204-349 - symbol:exd3 "exonuclease 3'-5'... 165 1.9e-11 2
UNIPROTKB|F1RVW3 - symbol:EXD3 "Uncharacterized protein" ... 152 2.0e-10 2
FB|FBgn0032924 - symbol:Nbr "Nibbler" species:7227 "Droso... 165 1.8e-09 2
WB|WBGene00003504 - symbol:mut-7 species:6239 "Caenorhabd... 136 3.3e-09 3
UNIPROTKB|P34607 - symbol:mut-7 "Probable exonuclease mut... 136 3.3e-09 3
UNIPROTKB|G3X7J6 - symbol:G3X7J6 "Uncharacterized protein... 163 1.2e-08 2
WB|WBGene00014220 - symbol:ZK1098.3 species:6239 "Caenorh... 128 5.9e-07 2
WB|WBGene00013256 - symbol:Y57A10A.13 species:6239 "Caeno... 110 2.6e-05 2
MGI|MGI:109635 - symbol:Wrn "Werner syndrome homolog (hum... 124 0.00054 3
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend... 112 0.00083 2
>TAIR|locus:2152871 [details] [associations]
symbol:AT5G24340 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002688 EMBL:AB016884
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR002782 Pfam:PF01927 EMBL:BT006449 EMBL:AK227650
IPI:IPI00549160 RefSeq:NP_197822.1 UniGene:At.30964
ProteinModelPortal:Q9FIN8 SMR:Q9FIN8 EnsemblPlants:AT5G24340.1
GeneID:832504 KEGG:ath:AT5G24340 TAIR:At5g24340
HOGENOM:HOG000242294 InParanoid:Q9FIN8 KO:K09122 OMA:NLEFWQC
PhylomeDB:Q9FIN8 ProtClustDB:CLSN2686327 Genevestigator:Q9FIN8
Uniprot:Q9FIN8
Length = 505
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 252/428 (58%), Positives = 309/428 (72%)
Query: 9 LKIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQPGPRFN 68
LKI+LV+ST+S EFTHL + ++S+++ LDAEWKPQ S+ S+FP V+LLQ+AC R +
Sbjct: 5 LKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHSNTSSFPTVTLLQVAC----RLS 60
Query: 69 PESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGC 128
+D S+ VF WELL ++FVSPD+LKLGF+FKQDL+YLSSTF GC
Sbjct: 61 HATDVSD---VFLIDLSSIHLPSVWELLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGC 117
Query: 129 DIGFDRVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKELQCSDWSNR 188
+ GF V+ YLDITSIYN+L HK+ GRK PK+ KSLA ICKE+LDISLSKELQCSDWS R
Sbjct: 118 EGGFQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYR 177
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSSNLDLGLKGILEKPDIG 248
PLTEEQK YAA DAHCL++IF++F+ + + I+ D +++GL+ IL + D
Sbjct: 178 PLTEEQKLYAATDAHCLLQIFDVFEAHLVE------GITVQDLRVINVGLQEILTESDYS 231
Query: 249 NKTVRFKLCEALDIIRATSYYSQCLPEGVVSRVSYLNTMPMDESLVKIVRKYGEKILLRE 308
+K V KLC+A D+IR+ S Q + GVV R + LNTMPMDE+L+KIVRK+GE+ILL+E
Sbjct: 232 SKIVTVKLCKATDVIRSMSENGQNIANGVVPRKTTLNTMPMDENLLKIVRKFGERILLKE 291
Query: 309 CDXXXXXXXXXXXXXXXVIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGL 368
D + K+L DWQGPPPWD SLGGDG PKFL DVMVEGL
Sbjct: 292 SDLLPKKLKKKTRRRVASSTMNTNKQLVCSADWQGPPPWDSSLGGDGCPKFLLDVMVEGL 351
Query: 369 AKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRHQYLIKNQIYRVKSLL 428
AKHLRCVGIDAA P SKKP+ REL+DQ KE RVLLTRD KLLRHQ L K+QIYRVKSLL
Sbjct: 352 AKHLRCVGIDAAIPHSKKPDSRELLDQAFKENRVLLTRDTKLLRHQDLAKHQIYRVKSLL 411
Query: 429 KNQQLLEV 436
KN+QLLEV
Sbjct: 412 KNEQLLEV 419
>UNIPROTKB|F1Q045 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AAEX03006727 EMBL:AAEX03006728
Ensembl:ENSCAFT00000030921 Uniprot:F1Q045
Length = 850
Score = 179 (68.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 59/214 (27%), Positives = 96/214 (44%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
D Y+ P+ IH + S E H A L +VG+D EW+P P+ S++Q
Sbjct: 339 DGYYQPPISREDIHFLASWEDLA-RHEAELLQPGQVVGVDLEWRPSFGTGGR-PQASIMQ 396
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A G F + + L+ +L P I KLG+ DL
Sbjct: 397 VAVG-GRVFLLDLP------LLSQPTGGQASQAFCRLVSQLLSDPSITKLGYGMAGDLRS 449
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQ---LGRKLPKETKSLANICKELLDIS 175
L ++ C + ++ LD+ ++ + LGR + + L+ + +++L
Sbjct: 450 LGAS-CPTLAHVE-KQLRGGLDLLQVHRQMRIADMPALGRGEARGLRGLSLLVQQVLGRP 507
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL+EEQ YAA DA+CL+E++
Sbjct: 508 LDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVY 541
Score = 84 (34.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 341 WQGPPPW-DLSLGGDGYP-KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK 398
WQ P D++ G + +CD M++GLA+ LRC+G+D + R + +
Sbjct: 585 WQEPAAKEDMAPGVPARAFRVVCDNMLQGLARSLRCLGVDVLA-LGTDDDHRRAAEVARQ 643
Query: 399 EKRVLLT 405
E R++LT
Sbjct: 644 EGRIILT 650
Score = 42 (19.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 18/62 (29%), Positives = 26/62 (41%)
Query: 326 VIVDSREKRLDDIGDWQGPPPWDLSLGGDGYPKFLCDVMVEGLAKHLRCVGIDAATPRSK 385
V + S ++ GD + P DL GD P + G HL C ++AA +S
Sbjct: 720 VRLGSPQEDAHSTGD-KADPSEDLQDAGDA-PD---EAPRGGYTSHLSCRWLEAADLQSH 774
Query: 386 KP 387
P
Sbjct: 775 AP 776
>UNIPROTKB|E1BWV5 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AADN02026991 EMBL:AADN02026982 EMBL:AADN02026983
EMBL:AADN02026965 EMBL:AADN02026966 EMBL:AADN02026967
EMBL:AADN02026968 EMBL:AADN02026969 EMBL:AADN02026970
EMBL:AADN02026971 EMBL:AADN02026972 EMBL:AADN02026973
EMBL:AADN02026974 EMBL:AADN02026975 EMBL:AADN02026976
EMBL:AADN02026977 EMBL:AADN02026978 EMBL:AADN02026979
EMBL:AADN02026980 EMBL:AADN02026981 EMBL:AADN02026984
EMBL:AADN02026985 EMBL:AADN02026986 EMBL:AADN02026987
EMBL:AADN02026988 EMBL:AADN02026989 EMBL:AADN02026990
EMBL:AADN02026992 EMBL:AADN02026993 EMBL:AADN02026994
EMBL:AADN02039946 IPI:IPI00573845 ProteinModelPortal:E1BWV5
Ensembl:ENSGALT00000014570 Uniprot:E1BWV5
Length = 725
Score = 142 (55.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 41/118 (34%), Positives = 61/118 (51%)
Query: 96 LKELFVSPDILKLGFKFKQDLIYLSSTFCS--QGCDIGFDRVEPYLDITSIYNHLHHKQL 153
++ L+ I KLG+ DL L++T CS +G D V L I + + L +Q
Sbjct: 445 IQRLYSDATITKLGYGMSGDLSSLAAT-CSTLKGMDKQSQSVVDLLTIDKLVDVLSPEQS 503
Query: 154 GRK--LPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L + K L+ + + +L L K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 504 CEDGGLRQPEKGLSLLVQHVLGKPLDKTEQMSNWEKRPLREEQILYAASDAYCLLEVY 561
Score = 82 (33.9 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 360 LCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT 405
+CD M++GL ++LRC+G+D ++ + R+ + +E RV+LT
Sbjct: 630 VCDNMLQGLGRYLRCLGVDVRMLENED-DHRKAAEIARQEGRVILT 674
Score = 74 (31.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 27 RALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLA 60
+ L +VG+D EW+P PRVSLLQLA
Sbjct: 383 KVLKPGQIVGIDMEWRPSFGMVGK-PRVSLLQLA 415
>UNIPROTKB|Q8N9H8 [details] [associations]
symbol:EXD3 "Probable exonuclease mut-7 homolog"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:BX322799 UniGene:Hs.495553 GeneCards:GC09M140201
HGNC:HGNC:26023 ChiTaRS:EXD3 eggNOG:NOG241966 InterPro:IPR002782
Pfam:PF01927 EMBL:AB061798 EMBL:AK055004 EMBL:AK094438
EMBL:BC037355 EMBL:BC110879 IPI:IPI00413242 IPI:IPI00884892
IPI:IPI00884936 IPI:IPI00885207 RefSeq:NP_060290.3 HSSP:Q14191
ProteinModelPortal:Q8N9H8 SMR:Q8N9H8 STRING:Q8N9H8 DMDM:308153580
PeptideAtlas:Q2TAK4 PRIDE:Q8N9H8 Ensembl:ENST00000340951
Ensembl:ENST00000342129 Ensembl:ENST00000479452 GeneID:54932
KEGG:hsa:54932 UCSC:uc004cmp.2 UCSC:uc004cmr.3 UCSC:uc010ncf.1
CTD:54932 HPA:HPA047395 neXtProt:NX_Q8N9H8 PharmGKB:PA164719422
HOVERGEN:HBG108161 InParanoid:Q8N9H8 OMA:QENWADH OrthoDB:EOG4MPHPR
GenomeRNAi:54932 NextBio:58039 ArrayExpress:Q8N9H8 Bgee:Q8N9H8
Genevestigator:Q8N9H8 Uniprot:Q8N9H8
Length = 876
Score = 163 (62.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 2 DCTYRKPL---KIHLVTSTESPEFTHLARALSQS-SLVGLDAEWKPQRSHQSNFPRVSLL 57
D Y+ P+ +HL+ S E + T AL Q +VG+D EW P PR SLL
Sbjct: 361 DRYYQLPIPRENVHLLASWE--DLTRHEGALLQCHQVVGVDVEWTPVFVAGGR-PRPSLL 417
Query: 58 QLACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLI 117
Q+A + G F + + L+ +L P I KLG+ DL
Sbjct: 418 QVAVE-GHVFLLDV------LALSQPPTGQGAQAFSRLVAQLLSDPSITKLGYGMVGDLQ 470
Query: 118 YLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKL---PKETKSLANICKELLDI 174
L T C + ++ +D+ ++ + + +E + L+ + +++L
Sbjct: 471 KLG-TSCPALAHVE-KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLLVQQVLGT 528
Query: 175 SLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEI 208
+L K Q S+W RPL EEQ YAA DA+CL+E+
Sbjct: 529 ALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEV 562
Score = 84 (34.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT 405
+ +CD M++GLA+ LRC+G+DA + + + R + +E R++LT
Sbjct: 631 RVVCDNMLQGLARSLRCLGVDARMLGNGE-DHRRAAEVARQEGRIILT 677
>ZFIN|ZDB-GENE-091204-349 [details] [associations]
symbol:exd3 "exonuclease 3'-5' domain containing 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-091204-349 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 EMBL:BX005370 IPI:IPI00491719
Ensembl:ENSDART00000092011 Uniprot:E7EY45
Length = 861
Score = 165 (63.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 66/221 (29%), Positives = 101/221 (45%)
Query: 5 YRKPL---KIHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLAC 61
Y+ PL +H V + E + A L S+VG+D EW+ S+ RV+L+QLA
Sbjct: 363 YQLPLPRENVHFVETLEEVDKCREA-VLKSGSVVGMDMEWRAGFGTVSS-QRVALIQLAV 420
Query: 62 QPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIYLSS 121
Q D+ ++ + ++ L ILKLG+ DL L S
Sbjct: 421 Q---------DQ--VFLLDLCAHAISHHSTTVDFIRALLSDKKILKLGYGMSGDLRSLVS 469
Query: 122 TFCSQGCDIGFD--RVEPYLDITSIYNHLHHKQLGRKL---------PKETKSLANICKE 170
T+ D+ + ++E LD+ I+ L LG K P E K L+ + ++
Sbjct: 470 TWP----DLREEPMKMEGVLDLLLIHQELQRCWLGNKGCRSVEVSEGPAE-KGLSLLVQQ 524
Query: 171 LLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFNI 211
+L L+K Q S+W RPL Q YAA DA+CL++I+ I
Sbjct: 525 VLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIYLI 565
Score = 71 (30.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT 405
+ +CD M++GL + LRC+G+D + + + + E RV+LT
Sbjct: 638 RVVCDNMLQGLGRFLRCLGVDVKMLENTD-DHKVAAELARAEGRVILT 684
>UNIPROTKB|F1RVW3 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 OMA:QENWADH EMBL:CU928955
Ensembl:ENSSSCT00000006434 Uniprot:F1RVW3
Length = 863
Score = 152 (58.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 58/214 (27%), Positives = 91/214 (42%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC Y+ P+ I + S E H A L +V +D EW+P P+ SL+Q
Sbjct: 360 DC-YQLPIAREDIRFLASWEDLA-RHEAELLQPGQVVSVDLEWRPSFGVGGR-PQASLMQ 416
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A + G F + + +L+ L P I KLG+ DL
Sbjct: 417 VAVE-GRVFLLDLPQ------LLSPARGQEPQAFSQLVSRLLADPSITKLGYGMAGDLRS 469
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQL---GRKLPKETKSLANICKELLDIS 175
L ++ C ++ LD+ ++ L G + L+ + +++L
Sbjct: 470 LGAS-CPALAQAQ-KQLRGSLDLLQVHKQLRVVDAPAPGVDGAAGPRGLSLLVQQVLGKP 527
Query: 176 LSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL EEQ YAA DA+CL+E++
Sbjct: 528 LDKTQQLSNWDRRPLGEEQLVYAAADAYCLLEVY 561
Score = 75 (31.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT 405
+ +CD M++GLA+ L C+G+D + + + R + +E R++LT
Sbjct: 618 RVVCDSMLQGLARRLLCLGVDVLVLGTGE-DHRRAAEVARQEGRIVLT 664
>FB|FBgn0032924 [details] [associations]
symbol:Nbr "Nibbler" species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0044748
"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end
processing" evidence=IMP] [GO:0044747 "mature miRNA 3'-end
processing" evidence=IMP] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014134 GO:GO:0003676 GO:GO:0030529
SUPFAM:SSF53098 GO:GO:0000175 GO:GO:0035196 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 EMBL:AY118462 RefSeq:NP_610094.1
UniGene:Dm.30864 ProteinModelPortal:Q9VIF1 SMR:Q9VIF1 IntAct:Q9VIF1
MINT:MINT-282622 PaxDb:Q9VIF1 PRIDE:Q9VIF1
EnsemblMetazoa:FBtr0081499 GeneID:35385 KEGG:dme:Dmel_CG9247
UCSC:CG9247-RA FlyBase:FBgn0032924 InParanoid:Q9VIF1 OMA:AIDARCL
OrthoDB:EOG4X69QB PhylomeDB:Q9VIF1 GenomeRNAi:35385 NextBio:793268
Bgee:Q9VIF1 GO:GO:0043628 Uniprot:Q9VIF1
Length = 625
Score = 165 (63.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 93 WELL-KELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
W LL +F + +I K+GF DL L + Q + YLD+ +++ L +
Sbjct: 475 WRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ---LRLQMPHHYLDLRNLWLELKKQ 531
Query: 152 QLGRKLP-----KETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLI 206
+ G +LP + +L ++ L L+K QCS+W+NRPL EQ YAAIDA CL+
Sbjct: 532 RFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLM 591
Query: 207 EIFNIFQVKVA 217
I+N +V+
Sbjct: 592 LIYNTLIERVS 602
Score = 48 (22.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 13 LVTSTESPEFTHLARALSQSSLVGLDAEW 41
L+ ++ EF + L Q ++ LD+EW
Sbjct: 410 LIIVNKADEFDRMLYHLQQECVIYLDSEW 438
>WB|WBGene00003504 [details] [associations]
symbol:mut-7 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000335 "negative regulation of transposition,
DNA-mediated" evidence=IMP] [GO:0016458 "gene silencing"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005829 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0048471 GO:GO:0002119
GO:GO:0016246 GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1
ProteinModelPortal:P34607 SMR:P34607 IntAct:P34607 STRING:P34607
PaxDb:P34607 EnsemblMetazoa:ZK1098.8 GeneID:176347
KEGG:cel:CELE_ZK1098.8 UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8
eggNOG:NOG241966 GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149
InParanoid:P34607 OMA:GFDMRND NextBio:892180 GO:GO:0000335
InterPro:IPR002782 Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 136 (52.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 49/181 (27%), Positives = 88/181 (48%)
Query: 93 WE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
W+ LF + +GF + DL ++ T + + + + D+ + ++
Sbjct: 480 WQKFASRLFGDSPVKVVGFDMRNDLDAMA-TIPALKSSMKIEDTKNAFDLKRLAENVCDI 538
Query: 152 QLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ +LPK+T LA++ LL + L K QCS+W RPL ++Q YAA+DA ++E F
Sbjct: 539 DMEILELPKKTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFK 598
Query: 211 IFQVKVAQKGNSCSSISEL-DSSNLDLGLKGILEKPDIGNKTVRFKL-----CEALDIIR 264
+ + ++ N + I ++ SN+ + K D G+K+ R KL E DI+R
Sbjct: 599 KI-LSIVEEKNKDADIEKIVRESNV------MAPKKDKGHKSYR-KLKTIPWLELYDILR 650
Query: 265 A 265
+
Sbjct: 651 S 651
Score = 63 (27.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 10 KIHLVTSTESPEFTHLA---RALSQSSL---VGLDAEWKPQRSHQSNFPRVSLLQL 59
+IH+V TES E +L ++LS VG D+EWKP + +++++QL
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQL 456
Score = 59 (25.8 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPR 383
K + D M+ G K+LR VGID P+
Sbjct: 666 KVIVDTMLIGFGKNLRRVGIDVILPK 691
>UNIPROTKB|P34607 [details] [associations]
symbol:mut-7 "Probable exonuclease mut-7" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0005829 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0048471 GO:GO:0002119 GO:GO:0016246
GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1 ProteinModelPortal:P34607
SMR:P34607 IntAct:P34607 STRING:P34607 PaxDb:P34607
EnsemblMetazoa:ZK1098.8 GeneID:176347 KEGG:cel:CELE_ZK1098.8
UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149 InParanoid:P34607
OMA:GFDMRND NextBio:892180 GO:GO:0000335 InterPro:IPR002782
Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 136 (52.9 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 49/181 (27%), Positives = 88/181 (48%)
Query: 93 WE-LLKELFVSPDILKLGFKFKQDLIYLSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHK 151
W+ LF + +GF + DL ++ T + + + + D+ + ++
Sbjct: 480 WQKFASRLFGDSPVKVVGFDMRNDLDAMA-TIPALKSSMKIEDTKNAFDLKRLAENVCDI 538
Query: 152 QLG-RKLPKETKSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIFN 210
+ +LPK+T LA++ LL + L K QCS+W RPL ++Q YAA+DA ++E F
Sbjct: 539 DMEILELPKKTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFK 598
Query: 211 IFQVKVAQKGNSCSSISEL-DSSNLDLGLKGILEKPDIGNKTVRFKL-----CEALDIIR 264
+ + ++ N + I ++ SN+ + K D G+K+ R KL E DI+R
Sbjct: 599 KI-LSIVEEKNKDADIEKIVRESNV------MAPKKDKGHKSYR-KLKTIPWLELYDILR 650
Query: 265 A 265
+
Sbjct: 651 S 651
Score = 63 (27.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 10 KIHLVTSTESPEFTHLA---RALSQSSL---VGLDAEWKPQRSHQSNFPRVSLLQL 59
+IH+V TES E +L ++LS VG D+EWKP + +++++QL
Sbjct: 403 QIHMV-KTES-EMNYLCSEIKSLSDEPAPVYVGFDSEWKPSNLTAVHDSKIAIIQL 456
Score = 59 (25.8 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPR 383
K + D M+ G K+LR VGID P+
Sbjct: 666 KVIVDTMLIGFGKNLRRVGIDVILPK 691
>UNIPROTKB|G3X7J6 [details] [associations]
symbol:G3X7J6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
OMA:QENWADH EMBL:DAAA02032393 EMBL:DAAA02032394
Ensembl:ENSBTAT00000032625 Uniprot:G3X7J6
Length = 724
Score = 163 (62.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 59/216 (27%), Positives = 99/216 (45%)
Query: 2 DCTYRKPLK---IHLVTSTESPEFTHLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQ 58
DC Y+ P+ I+ + S E H L +VG+D EW+P PRVSL+Q
Sbjct: 358 DC-YQLPISRDDIYFLASWEELA-RHEDTLLQPGQVVGVDLEWRPSFGTGGR-PRVSLMQ 414
Query: 59 LACQPGPRFNPESDESNASVVFXXXXXXXXXXXXWELLKELFVSPDILKLGFKFKQDLIY 118
+A + G F + ++ +L+ +L P I KLG+ DL
Sbjct: 415 VAVE-GRVFLLDLPRLSSPA------GGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRS 467
Query: 119 LSSTFCSQGCDIGFDRVEPYLDITSIYNHLHHKQLGRKLPKET-----KSLANICKELLD 173
L +++ + G +++ LD+ ++ + + R P + L+ + +++L
Sbjct: 468 LGTSYPALA-QAG-QKLQGGLDLLQVHRQM--RVADRPAPAVDGAAGPRGLSLLVQQVLG 523
Query: 174 ISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
L K Q S+W RPL E Q YAA DA+CL+E++
Sbjct: 524 KPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLEVY 559
Score = 44 (20.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 361 CDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSKEKRVLLT 405
C +GL+ L C G DA + ++ + I +E RV+LT
Sbjct: 630 CARSSQGLSSRLPCRGGDAKSIVARDAHA-QAIGVARQEGRVILT 673
>WB|WBGene00014220 [details] [associations]
symbol:ZK1098.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:Z22176 eggNOG:NOG241966 GeneTree:ENSGT00390000006843
PIR:C88558 PIR:S40926 RefSeq:NP_499104.1 UniGene:Cel.9500
ProteinModelPortal:P34603 SMR:P34603 PaxDb:P34603
EnsemblMetazoa:ZK1098.3 GeneID:176346 KEGG:cel:CELE_ZK1098.3
UCSC:ZK1098.3 CTD:176346 WormBase:ZK1098.3 HOGENOM:HOG000019150
InParanoid:P34603 OMA:PLILCDK NextBio:892176 Uniprot:P34603
Length = 784
Score = 128 (50.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 52/220 (23%), Positives = 95/220 (43%)
Query: 6 RKPLKIHLVTSTESPEF--THLARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQLACQP 63
+K I +V + + E + L L + +G D+E+KP + R++++QL
Sbjct: 417 QKKYPIRIVQNEQDLEILLSELGE-LEEGMYIGYDSEFKPYHLIDVSTSRLAIIQLF--- 472
Query: 64 GPRFNPESDESNASVVFXXXXXXXXXXXXW-ELLKELFVSPDILKLGFKFKQDLIYLSST 122
F ++ N + W L K LF S +GF +QD I T
Sbjct: 473 ---FKDKAWLINCVAI----DNLASRDDVWIRLYKGLFESNKFSIVGFDIRQD-IEAMFT 524
Query: 123 FCSQGCDIGFDRVEPYLDITSIYNHLHHKQLG-RKLPKETKSLANICKELLDISLSKELQ 181
S + + ++ + + S+ +++ + L +T L+ + L+ + + K Q
Sbjct: 525 VPSINKNFKIENIQNVICVKSLAENVNALSMDILNLSTKTSKLSVLADHLVGLKMDKSEQ 584
Query: 182 CSDWSNRPLTEEQKNYAAIDAHCLIEIFNIFQ--VKVAQK 219
C +W RPL Q YA +DA + +F +FQ V+V +K
Sbjct: 585 CGNWQCRPLRRNQIIYAVMDA---VAVFEVFQKIVEVVRK 621
Score = 66 (28.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 358 KFLCDVMVEGLAKHLRCVGIDAATPRSKKPEPRELIDQTSK----EKRVLLT 405
K + D MV GL K+LR +G D PR E +E + + K E+R++++
Sbjct: 679 KIVVDTMVLGLGKNLRLLGFDVYIPRDVT-ELKEFLRKMDKMEESEQRLVIS 729
>WB|WBGene00013256 [details] [associations]
symbol:Y57A10A.13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL117195
GeneTree:ENSGT00390000006843 PIR:T31632 PIR:T31633
RefSeq:NP_496590.1 ProteinModelPortal:Q9NA69 STRING:Q9NA69
PaxDb:Q9NA69 EnsemblMetazoa:Y57A10A.13 GeneID:174858
KEGG:cel:CELE_Y57A10A.13 UCSC:Y57A10A.13 CTD:174858
WormBase:Y57A10A.13 eggNOG:NOG281262 HOGENOM:HOG000021974
InParanoid:Q9NA69 OMA:MILAYQL NextBio:885800 Uniprot:Q9NA69
Length = 710
Score = 110 (43.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 162 KSLANICKELLDISLSKELQCSDWSNRPLTEEQKNYAAIDAHCLIEIF 209
K L+ IC++LL L K QCS W RPL Q YAA+DA+C++ ++
Sbjct: 627 KGLSFICEKLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674
Score = 68 (29.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 95 LLKELFVSPDILKLGFKFKQDLIYLSSTF 123
+L LF +P+I+K+GF+F +DL L + F
Sbjct: 504 VLSYLFETPEIVKIGFQFGEDLHQLRAAF 532
>MGI|MGI:109635 [details] [associations]
symbol:Wrn "Werner syndrome homolog (human)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000403
"Y-form DNA binding" evidence=ISO] [GO:0000405 "bubble DNA binding"
evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO;IGI;IMP] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=ISO] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003678 "DNA helicase
activity" evidence=ISO] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=ISO]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO;IMP] [GO:0006260
"DNA replication" evidence=ISO;IMP] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0006979 "response to oxidative
stress" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISO;IDA] [GO:0009267 "cellular
response to starvation" evidence=ISO] [GO:0009378 "four-way
junction helicase activity" evidence=ISO] [GO:0010225 "response to
UV-C" evidence=ISO] [GO:0010259 "multicellular organismal aging"
evidence=ISO;IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030145 "manganese
ion binding" evidence=ISO] [GO:0031297 "replication fork
processing" evidence=ISO] [GO:0032066 "nucleolus to nucleoplasm
transport" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0040009 "regulation of growth rate" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043138 "3'-5'
DNA helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051345 "positive regulation of hydrolase
activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
evidence=ISO] [GO:0071480 "cellular response to gamma radiation"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 MGI:MGI:109635
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145 GO:GO:0006310
GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 eggNOG:COG0514
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0032066 KO:K10900 CTD:7486
HOGENOM:HOG000146447 HOVERGEN:HBG000325 OMA:GIEGDQW
OrthoDB:EOG4DNF3J EMBL:D86527 EMBL:D86526 EMBL:AF091215
EMBL:AF091216 EMBL:AF241636 EMBL:AC153789 EMBL:AC115809
EMBL:BC050921 EMBL:BC060700 IPI:IPI00113830 PIR:T17452 PIR:T30247
RefSeq:NP_001116294.1 RefSeq:NP_035851.3 UniGene:Mm.228805 PDB:2E6L
PDB:2E6M PDBsum:2E6L PDBsum:2E6M ProteinModelPortal:O09053
SMR:O09053 DIP:DIP-27642N STRING:O09053 PhosphoSite:O09053
PaxDb:O09053 PRIDE:O09053 Ensembl:ENSMUST00000033990
Ensembl:ENSMUST00000033991 GeneID:22427 KEGG:mmu:22427
InParanoid:Q80YP9 EvolutionaryTrace:O09053 NextBio:302865
Bgee:O09053 CleanEx:MM_WRN Genevestigator:O09053
GermOnline:ENSMUSG00000031583 Uniprot:O09053
Length = 1401
Score = 124 (48.7 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 132 FD-RVEPYLDITSIYNHLHHKQLGRKLP-KETKSLANICKELLDISLSKE--LQCSDWSN 187
FD ++E ++++T + N KL ET SL + K +L L K+ ++CS+WSN
Sbjct: 145 FDVKLESFVELTDVANE--------KLKCAETWSLNGLVKHVLGKQLLKDKSIRCSNWSN 196
Query: 188 RPLTEEQKNYAAIDAHCLIEIFNIFQVKVAQKGNSCSSISELDSS--NLDLGLKGIL--- 242
PLTE+QK YAA DA+ + I+ K+ G++ + + L+ + NL L +K L
Sbjct: 197 FPLTEDQKLYAATDAYAGLIIYQ----KLGNLGDT-AQVFALNKAEENLPLEMKKQLNSI 251
Query: 243 --EKPDIGNKTVRFKL-CEALDIIRATSYYSQCLPEGVVS 279
E D+ N RF + C L+ ++ + + E + S
Sbjct: 252 SEEMRDLAN---RFPVTCRNLETLQRVPVILKSISENLCS 288
Score = 50 (22.7 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
++ LS +VG D EW P RV+++QL
Sbjct: 63 ISMRLSDGDVVGFDMEWPPIYKPGKR-SRVAVIQL 96
Score = 39 (18.8 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 377 IDAATPRSKKPEPRELIDQTSKEKRVLLTRDAKLLRH 413
+D A R E + ID S+ K LL ++++H
Sbjct: 1150 LDMAKMRPTTVENMKQIDGVSEGKAALLAPLLEVIKH 1186
>UNIPROTKB|Q14191 [details] [associations]
symbol:WRN "Werner syndrome ATP-dependent helicase"
species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
"regulation of growth rate" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031297 "replication fork processing" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0010259 "multicellular organismal aging" evidence=IMP]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
[GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
evidence=IDA] [GO:0009378 "four-way junction helicase activity"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
"positive regulation of hydrolase activity" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0009267 "cellular response to starvation"
evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
Uniprot:Q14191
Length = 1432
Score = 112 (44.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 32/86 (37%), Positives = 52/86 (60%)
Query: 132 FD-RVEPYLDITSIYNHLHHKQLGRKLPKETKSLANICKELLDISLSKE--LQCSDWSNR 188
FD +++ ++++T + N K+L K ET SL ++ K LL L K+ ++CS+WS
Sbjct: 151 FDIKLKNFVELTDVAN----KKL--KCT-ETWSLNSLVKHLLGKQLLKDKSIRCSNWSKF 203
Query: 189 PLTEEQKNYAAIDAHCLIEIFNIFQV 214
PLTE+QK YAA DA+ I+ ++
Sbjct: 204 PLTEDQKLYAATDAYAGFIIYRNLEI 229
Score = 58 (25.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 25 LARALSQSSLVGLDAEWKPQRSHQSNFPRVSLLQL 59
++ +LS +VG D EW P + + +V+L+QL
Sbjct: 69 ISMSLSDGDVVGFDMEWPPLYN-RGKLGKVALIQL 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 409 0.00079 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 619 (66 KB)
Total size of DFA: 272 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.46u 0.10s 33.56t Elapsed: 00:00:02
Total cpu time: 33.47u 0.10s 33.57t Elapsed: 00:00:02
Start: Mon May 20 15:27:24 2013 End: Mon May 20 15:27:26 2013