Query 013818
Match_columns 436
No_of_seqs 366 out of 2309
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 17:40:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013818.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013818hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ulia1 b.33.1.2 (A:17-170) Bi 100.0 5.1E-32 3.7E-36 239.6 11.6 128 79-223 17-153 (154)
2 d2b1xa1 b.33.1.2 (A:1-162) Nap 100.0 1.2E-31 8.6E-36 239.1 13.4 130 77-223 21-161 (162)
3 d2bmoa1 b.33.1.2 (A:3-152) Nit 100.0 3.2E-31 2.3E-35 233.1 13.6 127 80-223 13-150 (150)
4 d2de6a1 b.33.1.2 (A:1-142) Ter 100.0 5.1E-30 3.7E-34 223.9 12.8 114 112-226 22-142 (142)
5 d1z01a1 b.33.1.2 (A:16-163) 2- 100.0 8.5E-29 6.2E-33 217.6 12.7 112 113-225 23-141 (148)
6 d2jzaa1 b.33.1.3 (A:1-122) NAD 99.9 2.5E-25 1.8E-29 188.9 13.1 105 117-226 2-113 (122)
7 d1vm9a_ b.33.1.1 (A:) Toluene- 99.9 2.4E-25 1.7E-29 185.3 11.7 104 118-226 1-106 (109)
8 d2jo6a1 b.33.1.3 (A:1-108) NAD 99.9 1E-24 7.4E-29 181.2 9.5 99 117-220 2-107 (108)
9 d1fqta_ b.33.1.1 (A:) Rieske-t 99.9 5.1E-24 3.7E-28 177.2 13.4 102 118-224 2-105 (109)
10 d3c0da1 b.33.1.3 (A:4-111) NAD 99.9 3.6E-24 2.6E-28 177.8 9.0 100 118-222 2-107 (108)
11 d1rfsa_ b.33.1.1 (A:) ISP subu 99.8 3.7E-20 2.7E-24 157.3 5.5 94 126-224 18-114 (127)
12 d1g8kb_ b.33.1.1 (B:) Arsenite 99.7 7.6E-19 5.6E-23 150.1 6.9 89 121-214 10-111 (133)
13 d2e74d1 b.33.1.1 (D:46-179) IS 99.7 1.6E-18 1.2E-22 148.5 6.0 92 127-223 27-121 (134)
14 d1nyka_ b.33.1.1 (A:) Soluble 99.6 3.3E-16 2.4E-20 137.4 8.5 67 152-222 79-147 (156)
15 d3cx5e1 b.33.1.1 (E:87-215) IS 99.5 1.7E-14 1.3E-18 121.7 9.6 93 123-219 10-128 (129)
16 d1riea_ b.33.1.1 (A:) ISP subu 99.5 1.2E-13 8.5E-18 116.0 10.4 91 124-218 8-125 (127)
17 d1z01a2 d.129.3.3 (A:164-442) 99.3 1.6E-11 1.2E-15 117.0 14.8 199 213-427 3-245 (279)
18 d1jm1a_ b.33.1.1 (A:) Rieske p 99.1 2.1E-11 1.5E-15 110.1 6.7 68 148-219 80-162 (202)
19 d2b1xa2 d.129.3.3 (A:163-441) 97.9 2.7E-05 2E-09 72.8 10.8 37 237-273 24-62 (279)
20 d2bmoa2 d.129.3.3 (A:153-439) 97.7 1.2E-05 9.1E-10 75.1 5.9 36 238-273 25-62 (287)
21 d2de6a2 d.129.3.3 (A:143-384) 97.5 0.00014 1E-08 64.7 9.0 94 335-428 137-235 (242)
22 d1ulia2 d.129.3.3 (A:171-451) 97.4 2.3E-05 1.7E-09 73.1 2.7 37 237-273 24-62 (281)
23 d1wqla2 d.129.3.3 (A:181-459) 97.3 0.00016 1.2E-08 67.3 6.6 36 237-272 24-61 (279)
24 d1vqov1 a.2.2.1 (V:1-65) Ribos 55.5 13 0.00094 25.4 5.8 44 19-62 11-59 (65)
25 d1ubdc1 g.37.1.1 (C:295-322) Y 42.5 3.7 0.00027 23.1 0.7 8 159-166 3-10 (28)
26 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 38.7 24 0.0018 23.8 4.7 15 17-31 24-38 (67)
27 d2zjrv1 a.2.2.1 (V:1-66) Ribos 34.4 42 0.003 22.7 5.7 48 19-66 9-60 (66)
28 d1yzma1 a.2.19.1 (A:456-501) F 33.9 17 0.0012 23.1 3.1 24 16-39 22-45 (46)
29 d1r73a_ a.2.2.1 (A:) Ribosomal 28.8 71 0.0052 21.4 6.1 47 19-65 9-59 (66)
30 d2hepa1 a.2.21.1 (A:1-42) Hypo 25.2 24 0.0018 21.9 2.6 34 5-38 4-40 (42)
31 d1fxkc_ a.2.5.1 (C:) Prefoldin 23.4 47 0.0034 25.2 4.9 34 21-54 97-130 (133)
32 d2gycw1 a.2.2.1 (W:1-60) Ribos 22.0 38 0.0028 22.4 3.4 26 19-44 9-34 (60)
33 d1fpoa2 a.23.1.1 (A:77-171) HS 20.9 79 0.0058 22.5 5.5 60 1-64 20-83 (95)
No 1
>d1ulia1 b.33.1.2 (A:17-170) Biphenyl dioxygenase large subunit BphA1, N-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]}
Probab=99.97 E-value=5.1e-32 Score=239.61 Aligned_cols=128 Identities=19% Similarity=0.291 Sum_probs=116.1
Q ss_pred cCCCCCCChhhhHhhhcccCcccccccCCCCcccccccCceEEeeeCCCCC-CCCeEEEEEcCeeEEEEEcCCCcEEEEe
Q 013818 79 TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 157 (436)
Q Consensus 79 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~l~-~g~~~~~~~~g~~vvv~R~~dG~~~a~~ 157 (436)
+++..++|+++|+.|+++||+ +.|++||++++|+ +|++++++++|++++|+|+.+|+++||.
T Consensus 17 l~~~~Y~~~~~~~~E~~~if~-----------------~~W~~v~~~~el~~~g~~~~~~i~~~~ilv~R~~~g~i~af~ 79 (154)
T d1ulia1 17 LDPRIYTDEALYEQELERIFG-----------------RSWLLMGHETQIPKAGDFMTNYMGEDPVMVVRQKNGEIRVFL 79 (154)
T ss_dssp ECGGGGTCHHHHHHHHHHTTT-----------------TSCEEEEEGGGSCSTTEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred CCHHHcCCHHHHHHHHHHHhc-----------------cCCEEEEEhhhCCCCcceeeeecCCcceeEEeecccceeeee
Confidence 677789999999999999985 6699999999997 5999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCc-ccCCeEeCcCCCceeecCCCccccCCcc-------ccccccccCCeeeecCeEEEcCCC
Q 013818 158 NTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ-------LRNVKIKSLPCFEQEGMIWIWPGD 223 (436)
Q Consensus 158 n~CpHrg~~L~~g~-~~~~~l~CpyHgw~f~~~G~~~~~P~~~-------~~~~~l~~~pv~e~~G~I~v~~~~ 223 (436)
|+|||||++|+.+. ++++.|+||||||+|+.+|+|+.+|..+ ....+|..++|.+++|+||||+++
T Consensus 80 N~C~HRG~~L~~~~~g~~~~l~CpYHgW~f~~~G~~~~iP~~~~~~~~~~~~~~~L~~~~v~~~~G~Ifv~~d~ 153 (154)
T d1ulia1 80 NQCRHRGMRICRADGGNAKSFTCSYHGWAYDTGGNLVSVPFEEQAFPGLRKEDWGPLQARVETYKGLIFANWDA 153 (154)
T ss_dssp SCCTTTCCCSCCSSEEECSCEECTTTCCEECTTCCEEECTTHHHHCTTCCGGGSSCCEEEEEEETTEEEEECCT
T ss_pred cccccCCceeeecCCCccceEEeeeceeEEecCCccccCCcccccCCCCChHHCCCeEEeEEEECCEEEEEeCC
Confidence 99999999999854 5778999999999999999999999643 234678999999999999999964
No 2
>d2b1xa1 b.33.1.2 (A:1-162) Naphthalene 1,2-dioxygenase alpha subunit, N-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
Probab=99.97 E-value=1.2e-31 Score=239.09 Aligned_cols=130 Identities=20% Similarity=0.375 Sum_probs=116.1
Q ss_pred CccCCCCCCChhhhHhhhcccCcccccccCCCCcccccccCceEEeeeCCCCC-CCCeEEEEEcCeeEEEEEcCCCcEEE
Q 013818 77 DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGC 155 (436)
Q Consensus 77 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~l~-~g~~~~~~~~g~~vvv~R~~dG~~~a 155 (436)
-..|++.++|+++|+.|++++|+ +.|++||+++||+ +|++++++++|++++|+|+.||+++|
T Consensus 21 ~~lP~~~Y~d~~~f~~E~~~if~-----------------~~W~~v~~~~el~~~g~~~~~~~~~~~~vv~R~~dG~i~a 83 (162)
T d2b1xa1 21 WTVPAAIINDPEVHDVERERIFG-----------------HAWVFLAHESEIPERGDYVVRYISEDQFIVCRDEGGEIRG 83 (162)
T ss_dssp CEEEGGGSSCHHHHHHHHHHTTT-----------------TSCEEEEEGGGSCSTTEEEEEEETTEEEEEEECTTSCEEE
T ss_pred ccCCHHHcCCHHHHHHHHHHHHc-----------------CCCEEEEEHHHcCCccceeeEeecCCceEEEecCCcceEE
Confidence 34678889999999999999985 6699999999997 69999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCc-ccCCeEeCcCCCceeecCCCccccCCccc--------cccccccCC-eeeecCeEEEcCCC
Q 013818 156 VQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLP-CFEQEGMIWIWPGD 223 (436)
Q Consensus 156 ~~n~CpHrg~~L~~g~-~~~~~l~CpyHgw~f~~~G~~~~~P~~~~--------~~~~l~~~p-v~e~~G~I~v~~~~ 223 (436)
|.|+|||||++|+.|. +.++.|+||||||+||.+|+|+++|..+. .+.+|+.++ |++++|+|||++++
T Consensus 84 ~~N~C~HRG~~l~~~~~g~~~~i~CpYHgW~yd~~G~l~~~P~~~~~~~~~~~~~~~~L~~~~~v~~~~GlIfv~ldP 161 (162)
T d2b1xa1 84 HLNACRHRGMQVCRAEMGNTSHFRCPYHGWTYSNTGSLVGVPAGKDAYGNQLKKSDWNLRPMPNLASYKGLIFGSLDP 161 (162)
T ss_dssp EESSCTTTCCCSCCSSEEECSEEECTTTCCEEETTSCEEECTTTTTTTTTCCCGGGGSCCBCSEEEEETTEEEEESCT
T ss_pred eecccccCcccccccccCccccccCCCceeEEcCCCCeEECCCcccCCCCCCChhhcCCeeeeeEEEECCEEEEEcCC
Confidence 9999999999999875 57789999999999999999999997542 245778886 78899999999964
No 3
>d2bmoa1 b.33.1.2 (A:3-152) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]}
Probab=99.97 E-value=3.2e-31 Score=233.07 Aligned_cols=127 Identities=19% Similarity=0.299 Sum_probs=113.5
Q ss_pred CCCCCCChhhhHhhhcccCcccccccCCCCcccccccCceEEeeeCCCCC-CCCeEEEEEcCeeEEEEEcCCCcEEEEec
Q 013818 80 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQN 158 (436)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~W~~v~~~~~l~-~g~~~~~~~~g~~vvv~R~~dG~~~a~~n 158 (436)
+...++|+++|+.|+++||+ +.|++||+++||+ +|++++++++|.+++|+|+.||+++||.|
T Consensus 13 ~~~~y~D~~~f~~E~~~if~-----------------~~W~~v~~~~elp~~Gd~~~~~i~~~~~vv~R~~dg~i~af~N 75 (150)
T d2bmoa1 13 KLLIHGDKELFQHELKTIFA-----------------RNWLFLTHDSLIPSPGDYVKAKMGVDEVIVSRQNDGSVRAFLN 75 (150)
T ss_dssp EGGGGTCHHHHHHHHHHTTT-----------------TSCEEEEEGGGSCSTTEEEEEEETTEEEEEEECTTSCEEEEES
T ss_pred CccccCCHHHHHHHHHHHHH-----------------cCCeEeehHHHcCCCcceeeeeecCceeEEEecCCCchhhhhh
Confidence 33468999999999999986 5699999999997 69999999999999999999999999999
Q ss_pred CCCCCCCCCCCCc-ccCCeEeCcCCCceeecCCCccccCCcc--------ccccccccCC-eeeecCeEEEcCCC
Q 013818 159 TCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLP-CFEQEGMIWIWPGD 223 (436)
Q Consensus 159 ~CpHrg~~L~~g~-~~~~~l~CpyHgw~f~~~G~~~~~P~~~--------~~~~~l~~~p-v~e~~G~I~v~~~~ 223 (436)
+|||||++|+.|. +..+.|+||||||+||.+|+|+++|..+ ....+|..+| |++++|+|||+++.
T Consensus 76 ~C~HRG~~L~~~~~g~~~~i~CpYHgW~yd~~G~l~~~P~~~~~~~~~~~~~~~~L~~~~~ve~~~G~Ifv~lda 150 (150)
T d2bmoa1 76 VCRHRGKTLVHAEAGNAKGFVCGYHGWGYGSNGELQSVPFEKELYGDAIKKKCLGLKEVPRIESFHGFIYGCFDA 150 (150)
T ss_dssp BCTTTCCBCCCSSEEECSEEECTTTCCEEETTSCEEECTTHHHHTGGGCCGGGCCCCBCSEEEEETTEEEEESCT
T ss_pred hcccccccccccccccccceEecccceeeccccchhcCCCccccCCCCCChhhCCCcccceEEEECCEEEEecCC
Confidence 9999999999987 4678999999999999999999999743 1246789998 77789999999963
No 4
>d2de6a1 b.33.1.2 (A:1-142) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]}
Probab=99.96 E-value=5.1e-30 Score=223.89 Aligned_cols=114 Identities=28% Similarity=0.599 Sum_probs=101.1
Q ss_pred cccccCceEEeeeCCCCCCCCeEEEEEcCeeEEEEEcCCCcEEEEecCCCCCCCCCCCCc--ccCCeEeCcCCCceeec-
Q 013818 112 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS--VNEGRIQCPYHGWEYST- 188 (436)
Q Consensus 112 ~~~~~~~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R~~dG~~~a~~n~CpHrg~~L~~g~--~~~~~l~CpyHgw~f~~- 188 (436)
...|++.|++||+++||++|+++.+++.|++|+|+|+ +|+++|+.|+|||||++|+.|. ..++.|+||||||+||.
T Consensus 22 ~~~f~~~W~~v~~~~el~~g~~~~~~i~g~~ivv~r~-~g~v~a~~n~CpHrga~L~~g~~~~~~~~i~Cp~Hgw~fdl~ 100 (142)
T d2de6a1 22 KLGFRNHWYPVMFSKEINEGEPKTLKLLGENLLVNRI-DGKLYCLKDRCLHRGVQLSVKVECKTKSTITCWYHAWTYRWE 100 (142)
T ss_dssp TTCBSSEEEEEEEGGGSCBTCCEEEEETTEEEEEEEE-TTEEEEEESSCTTTCCCGGGGCCCCSTTEEECTTTCEEEETT
T ss_pred hcCCcccCEEEEEHHHCCCCCeEEEEECCEEEEEEEc-CCEEEEEeCccCCCCccCCccccccccCEEeccceeeEEecc
Confidence 4457899999999999999999999999999999996 8999999999999999999875 34578999999999996
Q ss_pred CCCccccCCccc----cccccccCCeeeecCeEEEcCCCCCC
Q 013818 189 DGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWPGDEPP 226 (436)
Q Consensus 189 ~G~~~~~P~~~~----~~~~l~~~pv~e~~G~I~v~~~~~~~ 226 (436)
+|.|+.+|..+. .+.+|++|||++++|+|||++++.+|
T Consensus 101 ~G~~~~~p~~~~~~~~~~~~l~~y~v~e~~G~I~v~l~d~~P 142 (142)
T d2de6a1 101 DGVLCDILTNPTSAQIGRQKLKTYPVQEAKGCVFIYLGDGDP 142 (142)
T ss_dssp TCBEEEETTCTTCTTTTSCBCCBCCEEEETTEEEEEESSSSC
T ss_pred CCceEecCCCcccCCccccCCCEEeEEEECCEEEEEeCCCCC
Confidence 899999987542 24679999999999999999986543
No 5
>d1z01a1 b.33.1.2 (A:16-163) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]}
Probab=99.95 E-value=8.5e-29 Score=217.56 Aligned_cols=112 Identities=23% Similarity=0.507 Sum_probs=99.2
Q ss_pred ccccCceEEeeeCCCCCCCCeEEEEEcCeeEEEEEcCCCcEEEEecCCCCCCCCCCCCc--ccCCeEeCcCCCceeec-C
Q 013818 113 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS--VNEGRIQCPYHGWEYST-D 189 (436)
Q Consensus 113 ~~~~~~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R~~dG~~~a~~n~CpHrg~~L~~g~--~~~~~l~CpyHgw~f~~-~ 189 (436)
..+.+.|++||.++||++|+++.++++|++|+|+| .+|+++||.|+|||||++|+.|. +.++.|+||||||+||. +
T Consensus 23 ~~~~~~W~~v~~~~el~~g~~~~~~i~g~~vvl~~-~~g~i~A~~n~CpHrg~~L~~g~~~~~~~~i~Cp~Hgw~fd~~~ 101 (148)
T d1z01a1 23 WGFINHWYPALFTHELEEDQVQGIQICGVPIVLRR-VNGKVFALKDQCLHRGVRLSEKPTCFTKSTISCWYHGFTFDLET 101 (148)
T ss_dssp TCBCSEEEEEEEGGGSCBTCEEEEEETTEEEEEEE-ETTEEEEEESSCTTTCCCGGGSCCCSSTTEEECTTTCEEEETTT
T ss_pred cCcccccEEEEEHHHCCCCCeEEEEECCEEEEEEE-ECCEEEEEEeecCccccEeEccccccccCEEEecccCCEEecCc
Confidence 34689999999999999999999999999998876 59999999999999999999885 35679999999999996 6
Q ss_pred CCccccCCccc----cccccccCCeeeecCeEEEcCCCCC
Q 013818 190 GKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWPGDEP 225 (436)
Q Consensus 190 G~~~~~P~~~~----~~~~l~~~pv~e~~G~I~v~~~~~~ 225 (436)
|.|+.+|.... ...+|++|||++++|+||||+++++
T Consensus 102 G~~~~~p~~~~~~~~~~~~l~~y~v~~~~g~I~v~l~~~~ 141 (148)
T d1z01a1 102 GKLVTIVANPEDKLIGTTGVTTYPVHEVNGMIFVFVREDD 141 (148)
T ss_dssp CBEEEETTCTTCTTTTSCBCCEECEEEETTEEEEEECCTT
T ss_pred ceEecccccccccCCccCCcceEEEEEECCEEEEEeCCCC
Confidence 99999887542 3578999999999999999997644
No 6
>d2jzaa1 b.33.1.3 (A:1-122) NADH-nitrite reductase small subunit NirD {Erwinia carotovora [TaxId: 554]}
Probab=99.92 E-value=2.5e-25 Score=188.88 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=93.1
Q ss_pred CceEEeeeCCCCCCCCeEEEEEcCeeEEEEEc-CCCcEEEEecCCCCCCCC-CCCCcc----cCCeEeCcCCCceeec-C
Q 013818 117 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACP-LHLGSV----NEGRIQCPYHGWEYST-D 189 (436)
Q Consensus 117 ~~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R~-~dG~~~a~~n~CpHrg~~-L~~g~~----~~~~l~CpyHgw~f~~-~ 189 (436)
..|+.||.++||++|+.+.+.+.|++++|+|. .+|+++|+.|+|||+|++ |+.|.+ ++..|+||||||+||. |
T Consensus 2 s~W~~Vc~~~dl~~g~~~~v~v~g~~v~l~~~~~~g~v~A~~~~CpH~g~~ll~~G~v~~~~~~~~i~Cp~Hg~~F~l~t 81 (122)
T d2jzaa1 2 SQWTTVCKLDDILPGTGVCALVEQQQIAVFRPRNDEQVYAISNIDPFAQASVLSRGIVAEHQDDLWVASPLKKQHFRLYD 81 (122)
T ss_dssp CSEEEEEETTTSCTTBCCEEEETTEEEEEEBCSSSSCCEEEBCCCTTTSSGGGTSSEEEESSSSEEEECSSSCCEEETTT
T ss_pred CCcEEEEEHHHcCCCCeEEEEECCEEEEEEEEcCCCEEEEEecCCCcccccccccceeeeccCCCEEECCCCCCeeeccc
Confidence 36999999999999999999999999999995 579999999999999999 677765 3357999999999995 8
Q ss_pred CCccccCCccccccccccCCeeeecCeEEEcCCCCCC
Q 013818 190 GKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP 226 (436)
Q Consensus 190 G~~~~~P~~~~~~~~l~~~pv~e~~G~I~v~~~~~~~ 226 (436)
|+|+..|+. .|++|||++++|.|||++.+.+.
T Consensus 82 G~~~~~p~~-----~l~~~~v~v~~g~V~v~~~~~~~ 113 (122)
T d2jzaa1 82 GFCLEDGAY-----SVAAYDTQVTNGNVQISIADSDV 113 (122)
T ss_dssp CCBSSCCSS-----CCBCCCEEESSSEEEEECCCCCC
T ss_pred ceeeecccc-----CCCccceEEECCEEEEEeCCcCc
Confidence 999999863 69999999999999999976543
No 7
>d1vm9a_ b.33.1.1 (A:) Toluene-4-monooxygenase system protein C, TmoC {Pseudomonas mendocina [TaxId: 300]}
Probab=99.92 E-value=2.4e-25 Score=185.33 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=94.5
Q ss_pred ceEEeeeCCCCCCCCeEEEEEc-CeeEEEEEcCCCcEEEEecCCCCCCCCCCCCcccCCeEeCcCCCceeec-CCCcccc
Q 013818 118 FWFPVAFSTDLKDDTMVPFDCF-EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYST-DGKCEKM 195 (436)
Q Consensus 118 ~W~~v~~~~~l~~g~~~~~~~~-g~~vvv~R~~dG~~~a~~n~CpHrg~~L~~g~~~~~~l~CpyHgw~f~~-~G~~~~~ 195 (436)
.|..||.++||++|+.+.+.+. |++++|+|..+|+++|+.|+|||+|++|+.|.++++.|+||||||+||. +|.|+..
T Consensus 1 ~w~~vc~~~dl~~g~~~~~~~~~g~~v~v~r~~~g~~~A~~~~CpH~g~~l~~g~~~~~~i~Cp~Hg~~F~l~~G~~~~p 80 (109)
T d1vm9a_ 1 SFEKICSLDDIWVGEMETFETSDGTEVLIVNSEEHGVKAYQAMCPHQEILLSEGSYEGGVITCRAHLWTFNDGTGHGINP 80 (109)
T ss_dssp CCEEEEEGGGSCTTCEEEEECTTCCEEEEEEETTTEEEEEESBCSSSSCBGGGSEEETTEEECTTTCCEEETTTCBBSSS
T ss_pred CeeEEEEHHHCCCCCeEEEEecCCeEEEEEEeCCCeEEEEEeeCCCCCccceeEeccCCEEEcccCCceEECCCccCCCC
Confidence 4999999999999999999985 7999999999999999999999999999999998899999999999995 8999864
Q ss_pred CCccccccccccCCeeeecCeEEEcCCCCCC
Q 013818 196 PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP 226 (436)
Q Consensus 196 P~~~~~~~~l~~~pv~e~~G~I~v~~~~~~~ 226 (436)
|. ..|+.|||++++|.|||.+++..|
T Consensus 81 ~~-----~~L~~~~v~v~~g~v~V~~~~~~P 106 (109)
T d1vm9a_ 81 DD-----AALAEYPVEVKGDDIYVSTKGILP 106 (109)
T ss_dssp SS-----CBCCEECEEEETTEEEECCTTCCC
T ss_pred CC-----CCccEEeEEEECCEEEEEeCCCCC
Confidence 43 479999999999999999866544
No 8
>d2jo6a1 b.33.1.3 (A:1-108) NADH-nitrite reductase small subunit NirD {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=1e-24 Score=181.17 Aligned_cols=99 Identities=18% Similarity=0.203 Sum_probs=88.3
Q ss_pred CceEEeeeCCCCCCCCeEEEEEcCeeEEEEE-cCCCcEEEEecCCCCCCCC-CCCCccc----CCeEeCcCCCceee-cC
Q 013818 117 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACP-LHLGSVN----EGRIQCPYHGWEYS-TD 189 (436)
Q Consensus 117 ~~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R-~~dG~~~a~~n~CpHrg~~-L~~g~~~----~~~l~CpyHgw~f~-~~ 189 (436)
..|++||.++||++|+++.+.+.|++++||| ..+|+++|+.|+|||+|++ |+.|.+. +..|+||||||+|| .|
T Consensus 2 s~W~~vc~~~dl~~g~~~~~~~~g~~i~l~r~~~~g~v~A~~~~CpH~g~~ll~~G~~~~~~~~~~i~Cp~Hg~~F~l~t 81 (108)
T d2jo6a1 2 SQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSD 81 (108)
T ss_dssp CCCEEEEETTTSCTTEEEEEEETTEEEEEEECSSSSCCEEEESSCSSSCCSCSTTSEEEEETTEEEEEETTTTEEEETTT
T ss_pred CCCEEEeEHHHCCCCCeEEEEECCEEEEEEEECcCCEEEEEECcCCCCCCccccceeEeccccCCEEECCCCCceEECCC
Confidence 3699999999999999999999999999999 4689999999999999998 6667653 23699999999999 58
Q ss_pred CCccccCCccccccccccCCeeeecCeEEEc
Q 013818 190 GKCEKMPSTQLRNVKIKSLPCFEQEGMIWIW 220 (436)
Q Consensus 190 G~~~~~P~~~~~~~~l~~~pv~e~~G~I~v~ 220 (436)
|+|+..|.. +|++|||++.+|.|||.
T Consensus 82 G~~~~~p~~-----~l~~y~v~v~~g~V~V~ 107 (108)
T d2jo6a1 82 GLCMEDEQF-----SVKHYEARVKDGVVQLR 107 (108)
T ss_dssp TEETTTTTT-----CCCEEEEEEETTEEEEE
T ss_pred ccCCCCCCC-----cccEEeEEEECCEEEEe
Confidence 999998863 69999999999999984
No 9
>d1fqta_ b.33.1.1 (A:) Rieske-type ferredoxin associated with biphenyl dioxygenase {Burkholderia cepacia [TaxId: 292]}
Probab=99.90 E-value=5.1e-24 Score=177.19 Aligned_cols=102 Identities=18% Similarity=0.262 Sum_probs=93.7
Q ss_pred ceEEeeeCCCCCCCCeEEEEEcCeeEEEEEcCCCcEEEEecCCCCCCCCCCCCc-ccCCeEeCcCCCceeec-CCCcccc
Q 013818 118 FWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRIQCPYHGWEYST-DGKCEKM 195 (436)
Q Consensus 118 ~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R~~dG~~~a~~n~CpHrg~~L~~g~-~~~~~l~CpyHgw~f~~-~G~~~~~ 195 (436)
.|+.||.++||++|+.+.+++.|.+++|+|. +|+++|++|+|||+|++|+.|. ++++.|+||+|||+||. ||+|+..
T Consensus 2 ~w~~v~~~~dl~~g~~~~~~~~~~~i~v~r~-~~~~~A~~~~CpH~g~~l~~g~~~~~~~i~Cp~H~~~F~l~tG~~~~~ 80 (109)
T d1fqta_ 2 KFTRVCDRRDVPEGEALKVESGGTSVAIFNV-DGELFATQDRCTHGDWSLSDGGYLEGDVVECSLHMGKFCVRTGKVKSP 80 (109)
T ss_dssp CCEEEEEGGGSCTTCEEEEEETTEEEEEEEE-TTEEEEEESBCTTSSCBSSTTCCEETTEEECTTTCCEEETTTCCEEES
T ss_pred cEEEeeEHHHCCCCCEEEEEECCEEEEEEEE-CCEEEEEEeeccccCcccccceeecCCEEEccccCCEEECCCccCccC
Confidence 5999999999999999999999999999996 7899999999999999999875 56789999999999995 8999999
Q ss_pred CCccccccccccCCeeeecCeEEEcCCCC
Q 013818 196 PSTQLRNVKIKSLPCFEQEGMIWIWPGDE 224 (436)
Q Consensus 196 P~~~~~~~~l~~~pv~e~~G~I~v~~~~~ 224 (436)
|... .|++||+++.+|.|||+++.+
T Consensus 81 p~~~----~l~~~~v~~~~g~i~v~~~~~ 105 (109)
T d1fqta_ 81 PPCE----ALKIFPIRIEDNDVLVDFEAG 105 (109)
T ss_dssp SCCS----CCCBCCEEEETTEEEECTTCC
T ss_pred CCCC----CCCEEeEEEECCEEEEEeCCC
Confidence 9853 699999999999999998754
No 10
>d3c0da1 b.33.1.3 (A:4-111) NADH-nitrite reductase small subunit NirD {Vibrio parahaemolyticus [TaxId: 670]}
Probab=99.90 E-value=3.6e-24 Score=177.84 Aligned_cols=100 Identities=14% Similarity=0.014 Sum_probs=89.0
Q ss_pred ceEEeeeCCCCCCCCeEEEEEcCeeEEEEEcCCCcEEEEecCCCCCCCCCCCCc-c----cCCeEeCcCCCceee-cCCC
Q 013818 118 FWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-V----NEGRIQCPYHGWEYS-TDGK 191 (436)
Q Consensus 118 ~W~~v~~~~~l~~g~~~~~~~~g~~vvv~R~~dG~~~a~~n~CpHrg~~L~~g~-~----~~~~l~CpyHgw~f~-~~G~ 191 (436)
.|+.||.++||++|+.+.+.+.|.+++|+|..+|+++|++|+|||+|++|..+. + .+..|+||||||+|| .+|+
T Consensus 2 ~~v~vc~~~dl~~g~~~~~~~~g~~i~v~r~~~g~~~A~~~~CpH~g~~L~~~g~~~~~~~~~~i~Cp~Hg~~Fdl~tG~ 81 (108)
T d3c0da1 2 TKVKLCQLDDLMPFIGATVLIEGERVALFYIPDSGVYAVQDWDPIGKAYVMSRGIVGDINGEMCVASPLYKQHFSLKSGQ 81 (108)
T ss_dssp CEEEEEEGGGSCBTCCEEEEETTEEEEEEEETTTEEEEEESEETTTTEECGGGSEEEESSSSEEEECTTTCCEEETTTCB
T ss_pred CcEEEEEHHHCCCCCEEEEEECCEEEEEEEeCCCCEEEEEccCCCCCcccccccEEEecCCceEEeccccccEEeccCCc
Confidence 589999999999999999999999999999989999999999999999987643 2 123699999999999 5999
Q ss_pred ccccCCccccccccccCCeeeecCeEEEcCC
Q 013818 192 CEKMPSTQLRNVKIKSLPCFEQEGMIWIWPG 222 (436)
Q Consensus 192 ~~~~P~~~~~~~~l~~~pv~e~~G~I~v~~~ 222 (436)
|+..|.. +|++|||++.+|.|||...
T Consensus 82 ~~~~p~~-----~l~~y~v~v~~g~V~V~~~ 107 (108)
T d3c0da1 82 CLEDEAH-----CLKTWRVTVDDNQVCYLAK 107 (108)
T ss_dssp BSSCTTC-----BCCEECEEESSSEEEEECC
T ss_pred cccCCCC-----cccEEeEEEECCEEEEEec
Confidence 9988763 6999999999999999763
No 11
>d1rfsa_ b.33.1.1 (A:) ISP subunit from chloroplast cytochrome bf complex {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=99.78 E-value=3.7e-20 Score=157.34 Aligned_cols=94 Identities=18% Similarity=0.348 Sum_probs=77.1
Q ss_pred CCCCCCCeEEEE-EcCeeEEEEEc--CCCcEEEEecCCCCCCCCCCCCcccCCeEeCcCCCceeecCCCccccCCccccc
Q 013818 126 TDLKDDTMVPFD-CFEEPWVIFRG--KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN 202 (436)
Q Consensus 126 ~~l~~g~~~~~~-~~g~~vvv~R~--~dG~~~a~~n~CpHrg~~L~~g~~~~~~l~CpyHgw~f~~~G~~~~~P~~~~~~ 202 (436)
.+.++|+...+. +.|.++++++. .+|+++||+|+|||+||+|.+|.. ++.|+||||||+||.+|+|+.+|+.
T Consensus 18 ~~~~~G~~~l~~~~~g~~~~lvv~~d~~~~v~A~~~~C~H~g~~l~~~~~-~~~~~Cp~Hg~~Fd~~G~~~~~Pa~---- 92 (127)
T d1rfsa_ 18 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAA-ENKFICPCHGSQYNNQGRVVRGPAP---- 92 (127)
T ss_dssp HHSCTTCEEEEECGGGCEEEEEBCTTSSBCSEEEECBCTTTCCBCCEETT-TTEEECTTTCCEEETTCCEEESSCC----
T ss_pred cccCCCcceeeeeecCCceEEEEEeCCCCEEEEEcCCCCCCCCCccCccc-CCeEEcCCCCeEECCCCCCCcCCCC----
Confidence 455667654444 56777666655 455899999999999999998864 4799999999999999999999985
Q ss_pred cccccCCeeeecCeEEEcCCCC
Q 013818 203 VKIKSLPCFEQEGMIWIWPGDE 224 (436)
Q Consensus 203 ~~l~~~pv~e~~G~I~v~~~~~ 224 (436)
..|+.|++++.+|.|||....+
T Consensus 93 ~~L~~~~v~v~~g~i~v~~~~~ 114 (127)
T d1rfsa_ 93 LSLALAHCDVDDGKVVFVPWTE 114 (127)
T ss_dssp SCCCEEEEEEETTEEEEEECCS
T ss_pred CCcceEeEEEECCEEEEEcCCc
Confidence 4899999999999999987543
No 12
>d1g8kb_ b.33.1.1 (B:) Arsenite oxidase Rieske subunit {Alcaligenes faecalis [TaxId: 511]}
Probab=99.74 E-value=7.6e-19 Score=150.12 Aligned_cols=89 Identities=20% Similarity=0.293 Sum_probs=76.4
Q ss_pred EeeeCCCCCCCCeEEEEE--cCeeEEEEEc---------CCCcEEEEecCCCCCCCCCCCCcccCCeEeCcCCCceeec-
Q 013818 121 PVAFSTDLKDDTMVPFDC--FEEPWVIFRG---------KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYST- 188 (436)
Q Consensus 121 ~v~~~~~l~~g~~~~~~~--~g~~vvv~R~---------~dG~~~a~~n~CpHrg~~L~~g~~~~~~l~CpyHgw~f~~- 188 (436)
.|+.+++|++|+++.+.+ .+.+.+++|. .||+++||+|+|||+|++|+++. .++.|.||||||+||.
T Consensus 10 ~v~~~~~l~~~~p~~f~yp~~~~p~~lVr~g~~v~~~~g~~g~i~A~~~~CpH~g~~l~~~~-~~~~i~Cp~Hg~~Fd~~ 88 (133)
T d1g8kb_ 10 AVSVAKNLAANEPVSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSVLCTHMGCPTSYDS-SSKTFSCPCHFTEFDAE 88 (133)
T ss_dssp EEEEGGGCCBTCCEEEECSSTTSEEEEEECSSCCTTCBTTTTCEEEEECBCTTTCCBCEEET-TTTEEECTTTCCEEEGG
T ss_pred heEEHHHCCCCCCEEEeccCCCCCEEEEEcCCceeEEECCCCEEEEEehhcCCCCcccccCc-ccCEEECCCCCeEEecC
Confidence 789999999999999886 6788999885 46999999999999999999876 4579999999999995
Q ss_pred -CCCccccCCccccccccccCCeeeec
Q 013818 189 -DGKCEKMPSTQLRNVKIKSLPCFEQE 214 (436)
Q Consensus 189 -~G~~~~~P~~~~~~~~l~~~pv~e~~ 214 (436)
+|+++.+|+.+ .|+.|+++..+
T Consensus 89 ~~G~~~~gPa~~----~L~~~~v~ve~ 111 (133)
T d1g8kb_ 89 KAGQMICGEATA----DLPRVLLRYDA 111 (133)
T ss_dssp GTTEEEESSCSS----CCCEEEEEEET
T ss_pred CCceEeCCCCCC----CCCeEeEEEEC
Confidence 69999999854 67778876543
No 13
>d2e74d1 b.33.1.1 (D:46-179) ISP subunit from the cytochrome b6f complex, soluble domain {Mastigocladus laminosus [TaxId: 83541]}
Probab=99.72 E-value=1.6e-18 Score=148.49 Aligned_cols=92 Identities=18% Similarity=0.304 Sum_probs=71.4
Q ss_pred CCCCCCe-EEEEEcCee--EEEEEcCCCcEEEEecCCCCCCCCCCCCcccCCeEeCcCCCceeecCCCccccCCcccccc
Q 013818 127 DLKDDTM-VPFDCFEEP--WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 203 (436)
Q Consensus 127 ~l~~g~~-~~~~~~g~~--vvv~R~~dG~~~a~~n~CpHrg~~L~~g~~~~~~l~CpyHgw~f~~~G~~~~~P~~~~~~~ 203 (436)
..++|+. ....+.|.+ +++.|+.+|+++||+|+|||+||+|++|.. ++.|.||||||+||.+|.|+.+|+. .
T Consensus 27 ~~~~g~~~l~~~~~g~~~~~~v~~~~~g~~~A~~~~C~H~G~~l~~g~~-~~~~~Cp~Hg~~Fd~~G~~~~gPa~----~ 101 (134)
T d2e74d1 27 SHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAA-ENKFKCPCHGSQYDETGKVIRGPAP----L 101 (134)
T ss_dssp SSCSTTCEEEECGGGCEEEEC-----CCCSEEEECBCTTTCCBCCBCTT-TSCEEETTTTEEECSSSCBCSSSCC----S
T ss_pred ccCCCceEeeeecCCCceEEEEEeCCCCcEEEEeccccCCEEEcccccc-CCccCCCCCCcEECCCCCEEeCCCC----C
Confidence 3344443 333445556 555577889999999999999999999985 4789999999999999999999984 4
Q ss_pred ccccCCeeeecCeEEEcCCC
Q 013818 204 KIKSLPCFEQEGMIWIWPGD 223 (436)
Q Consensus 204 ~l~~~pv~e~~G~I~v~~~~ 223 (436)
.|++|++++.+|.|||.+..
T Consensus 102 ~L~~y~v~v~~~~i~V~p~~ 121 (134)
T d2e74d1 102 SLALCHATVQDDNIVLTPWT 121 (134)
T ss_dssp CCCEEEEECCTTSCEEEECC
T ss_pred CcceeeEEEECCEEEEeCCc
Confidence 79999999999999997644
No 14
>d1nyka_ b.33.1.1 (A:) Soluble Rieske protein {Thermus thermophilus [TaxId: 274]}
Probab=99.62 E-value=3.3e-16 Score=137.37 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=60.2
Q ss_pred cEEEEecCCCCCCCCCCCCcccCCeEeCcCCCceeec--CCCccccCCccccccccccCCeeeecCeEEEcCC
Q 013818 152 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYST--DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPG 222 (436)
Q Consensus 152 ~~~a~~n~CpHrg~~L~~g~~~~~~l~CpyHgw~f~~--~G~~~~~P~~~~~~~~l~~~pv~e~~G~I~v~~~ 222 (436)
.++||+|+|||+||+|+.+...++.|.||||||+||. .|.++.+|+. ..|+.||+++.+|.|||.-+
T Consensus 79 ~i~A~~~~CtH~g~~l~~~~~~~~~~~Cp~Hgs~FD~~~gg~v~~gPa~----~~L~~~~~~~~~g~i~v~~d 147 (156)
T d1nyka_ 79 GVVAYSAVCTHLGCIVSQWVADEEAALCPCHGGVYDLRHGAQVIAGPPP----RPVPQLPVRVEDGVLVAAGE 147 (156)
T ss_dssp TEEEEECBCTTTCCBCCEEEGGGTEEECTTTCCEEEGGGTTEEEESSCS----SCCCEECEEEETTEEEECSS
T ss_pred cEEEEcccCcccccccccccccCCeeeccccceEEecCCCceEeCCCCC----CCCCEEEEEEECCEEEEeec
Confidence 4899999999999999998888899999999999995 5888998874 47999999999999999643
No 15
>d3cx5e1 b.33.1.1 (E:87-215) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.51 E-value=1.7e-14 Score=121.72 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=81.5
Q ss_pred eeCCCCCCCCeEEEEEcCeeEEEEEc--------------------------CCCcEEEEecCCCCCCCCCCCCcccCCe
Q 013818 123 AFSTDLKDDTMVPFDCFEEPWVIFRG--------------------------KDGIPGCVQNTCAHRACPLHLGSVNEGR 176 (436)
Q Consensus 123 ~~~~~l~~g~~~~~~~~g~~vvv~R~--------------------------~dG~~~a~~n~CpHrg~~L~~g~~~~~~ 176 (436)
-.+++|++|+.+++..-|+|++|.|. .++++.++..+|+|.||.+.+.....+.
T Consensus 10 VDis~l~pG~~~~V~WrGkPVfI~~Rt~e~i~~~~~~~~~~l~dp~~~~~r~~~~~~~v~~~~CtHlGC~~~~~~~~~~~ 89 (129)
T d3cx5e1 10 VNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGG 89 (129)
T ss_dssp EEGGGCCTTCEEEEEETTEEEEEEECCHHHHHHHHCSCGGGCSSCCCSTTTCSSTTEEEEECCCTTTSCCCEEEETTTTE
T ss_pred EehhhCCCCCeEEEEeCCceEEEEecCHHHhhhccccccccccccccchhccccccEEEEEeeccCcceeeeeccCcCCe
Confidence 36788999999999999999988754 2478999999999999999887666689
Q ss_pred EeCcCCCceeecCCCccccCCccccccccccCCeeeecCeEEE
Q 013818 177 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 219 (436)
Q Consensus 177 l~CpyHgw~f~~~G~~~~~P~~~~~~~~l~~~pv~e~~G~I~v 219 (436)
|.|||||++||.+|+.+.+|+. ..|..+|+...++.|.|
T Consensus 90 ~~CPCHgs~fd~~G~v~~GPA~----~~L~~~~~~~~~~~i~i 128 (129)
T d3cx5e1 90 WFCPCHGSHYDISGRIRKGPAP----LNLEIPAYEFDGDKVIV 128 (129)
T ss_dssp EEETTTTEEECTTCCEEESSCC----SCCCCCCEEEETTEEEE
T ss_pred EEEcCcCCCCCCCCCEEeCCCC----CCCCCCcEEEECCEEEE
Confidence 9999999999999999999984 58999999998887765
No 16
>d1riea_ b.33.1.1 (A:) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.46 E-value=1.2e-13 Score=116.02 Aligned_cols=91 Identities=19% Similarity=0.299 Sum_probs=77.8
Q ss_pred eCCCCCCCCeEEEEEcCeeEEEEEc--------------------------CCCcEEEEecCCCCCCCCCCCCcccCCeE
Q 013818 124 FSTDLKDDTMVPFDCFEEPWVIFRG--------------------------KDGIPGCVQNTCAHRACPLHLGSVNEGRI 177 (436)
Q Consensus 124 ~~~~l~~g~~~~~~~~g~~vvv~R~--------------------------~dG~~~a~~n~CpHrg~~L~~g~~~~~~l 177 (436)
.+++|++|+.+++..-|+|+.|.|. .++++.++..+|+|.||...+...+.+.|
T Consensus 8 DlS~lepG~~~~V~WrGkPvfV~rRt~e~i~~~~~~~~~~l~dp~~~~~r~~~~~~~~~~~~CtHlGC~~~~~~~~~~~f 87 (127)
T d1riea_ 8 KLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGY 87 (127)
T ss_dssp EGGGSCTTCEEEEEETTEEEEEEECCHHHHHHHHTCCGGGCSSCCCGGGTCSSTTEEEEECCCTTTSCCCEETCTTTEEE
T ss_pred ehhhCCCCCEEEEEECCceeEEEecCHHHhhhhhccchhhhcCccccccccccceEEEEEeccCCCCceeecccccCCeE
Confidence 5678899999999999999998864 26889999999999999988766555789
Q ss_pred eCcCCCceeecCCCccccCCccccccccccCCeeeec-CeEE
Q 013818 178 QCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQE-GMIW 218 (436)
Q Consensus 178 ~CpyHgw~f~~~G~~~~~P~~~~~~~~l~~~pv~e~~-G~I~ 218 (436)
.|||||++||.+|+.+.+|+ +..|..+|+...+ +.|-
T Consensus 88 ~CPCHgs~fd~~Grv~~GPA----p~~L~~p~~~~~~d~~v~ 125 (127)
T d1riea_ 88 YCPCHGSHYDASGRIRKGPA----PLNLEVPSYEFTSDDMVI 125 (127)
T ss_dssp EETTTTEEEETTCCEEESSC----CSCCCCCCEEESSSSEEE
T ss_pred EecCcCCcCCCCCCEEcCCC----CCCCCCCcEEEeCCCEEE
Confidence 99999999999999999997 4578889988765 4443
No 17
>d1z01a2 d.129.3.3 (A:164-442) 2-oxo-1,2-dihydroquinoline 8-monooxygenase, oxygenase component OxoO {Pseudomonas putida [TaxId: 303]}
Probab=99.29 E-value=1.6e-11 Score=117.02 Aligned_cols=199 Identities=14% Similarity=0.143 Sum_probs=108.4
Q ss_pred ecCeEEEcCCCCC--CCCCCCCCCC--CCCcEEeEEEEEEeecCchhhhhccCCCCCCCCCCcccccCC---CCCCc---
Q 013818 213 QEGMIWIWPGDEP--PTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---WSVPS--- 282 (436)
Q Consensus 213 ~~G~I~v~~~~~~--~~~~lp~~~~--~~~~~~~~~~~~~~~~nwk~~~EN~~D~~H~~~vH~~t~~~~---~~~p~--- 282 (436)
..|++||++++.. |.+.+|+++. .++..+.. ....++|||-..+||.+|++|+ |+|..+.... ...+.
T Consensus 3 ~~~~~~~~~~~~~~~~~p~~p~~p~~~~~~~~~~~-~~~~~~~NWlQ~~En~iD~aH~-fLH~~s~~~~~~d~~~~~g~~ 80 (279)
T d1z01a2 3 AHDLPFRFPERSEQFPHPLWPSSPSVLDDNAVVHG-MHRTGFGNWRIACENGFDNAHI-LVHKDNTIVHAMDWVLPLGLL 80 (279)
T ss_dssp GGGSCCCTTTTTTTSCCTTSCCCCCTTSTTEEEEE-EEEEEESCHHHHHTTTTCTTGG-GGGTTCHHHHHTTCCCCSEEE
T ss_pred ccCCceecCCccccCCCCCCCCCCcccCCCceEEE-EEEEeecchhhhhhcCcChhhe-eeecccccccccccccccccc
Confidence 4688999987643 3333444432 23444333 5668999999999999999998 9998653210 00000
Q ss_pred -----eeeeecCCCCCCcccc------------------------CCCccceecCCeeEEEEeeecCCCCcCCCCccccc
Q 013818 283 -----LVKFLTPASGLQGYWD------------------------PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 333 (436)
Q Consensus 283 -----~~~~~~~~~~~~~~~~------------------------~~~~~~~f~~P~~~~~~~~~~~~g~~~~~~~~~~~ 333 (436)
............+..+ .+.....+..|+..+... .|.
T Consensus 81 ~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~~~~v~~---~p~----------- 146 (279)
T d1z01a2 81 PTSDDCIAVVEDDDGPKGMMQWLFTDKWAPVLENQELGLKVEGLKGRHYRTSVVLPGVLMVEN---WPE----------- 146 (279)
T ss_dssp ECSTTSEEEECCSSSCCEEEECTTSTTEEEECEETTTTEECCCCCCCCCEEEEETTTEEEEET---CSS-----------
T ss_pred cccccccceeeccCCCcceeeeeccccccceeecccCceecccccccccccceecCceeeccC---CCC-----------
Confidence 0000000001111000 001112344555443211 111
Q ss_pred ceeEEEEEeecCCCCceeeeeeeeccchhhccCcchHHHH---HHH-HHHHHHhhHHHHHHHHHhhccCCCC-CCCcccc
Q 013818 334 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRH-FAEQVLNEDLRLVLGQQERMNNGAN-VWNLPVG 408 (436)
Q Consensus 334 ~~~~~~~~~~P~s~~~tr~~~~~~~~~~~~~~~~p~~~~~---~~~-~~~~v~~ED~~ile~qq~~l~~g~~-~~~l~~~ 408 (436)
..+.++...+|+++++|++++.+++.+........+.... +.. -...|..||..++|+|++-...... ..|....
T Consensus 147 ~~~~~~~w~VPIDD~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qD~~a~es~gpi~~~~~drt~E~L~~ 226 (279)
T d1z01a2 147 EHVVQYEWYVPITDDTHEYWEILVRVCPTDEDRKKFQYRYDHMYKPLCLHGFNDSDLYAREAMQNFYYDGTGWDDEQLVA 226 (279)
T ss_dssp TTCEEEEEEEESSSSEEEEEEEEEEECCSHHHHHHHHHHHHTTHHHHTTTTHHHHHHHHHHHHHHHHHTSHHHHHCCCCG
T ss_pred CCceEEEEEcccCCCcEEEEEEEeecCCChhhhhHHHHHHHHhhcccccCCCchhhHHHHHccCcccccCCCCccccccc
Confidence 1133455568999999998877666543221111111111 111 1233778999999999997654321 2357789
Q ss_pred CCHHHHHHHHHHHHHHccC
Q 013818 409 YDKLGVRYRLWRDALEKGA 427 (436)
Q Consensus 409 aD~~~v~~Rrwl~~l~~g~ 427 (436)
+|+++++|||++.+..++-
T Consensus 227 sD~~Iv~~Rrll~~~~r~i 245 (279)
T d1z01a2 227 TDISPITWRKLASRWNRGI 245 (279)
T ss_dssp GGHHHHHHHHHHHHHCSCB
T ss_pred ccHHHHHHHHHHHHHHHhh
Confidence 9999999999988775443
No 18
>d1jm1a_ b.33.1.1 (A:) Rieske protein II (SoxF) {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=99.14 E-value=2.1e-11 Score=110.12 Aligned_cols=68 Identities=22% Similarity=0.420 Sum_probs=57.1
Q ss_pred cCCCcEEEEecCCCCCCCCCCCCc-----------ccCCeEeCcCCCceeec--CCCccccCCccccccccccCCeeee-
Q 013818 148 GKDGIPGCVQNTCAHRACPLHLGS-----------VNEGRIQCPYHGWEYST--DGKCEKMPSTQLRNVKIKSLPCFEQ- 213 (436)
Q Consensus 148 ~~dG~~~a~~n~CpHrg~~L~~g~-----------~~~~~l~CpyHgw~f~~--~G~~~~~P~~~~~~~~l~~~pv~e~- 213 (436)
+.+|+|+||+++|||.||++.+.. ..++.|.|||||++||. +|+++.+|+.+ .|..++++..
T Consensus 80 Gp~~~ivA~s~iCtHlGC~~~~~~~~~~~~~~~~~~~~~~i~CpcHgS~FD~~~gG~v~~GPA~~----pLp~v~Le~d~ 155 (202)
T d1jm1a_ 80 GPNGTIFAFSDVCVHLGCQLPAQVIVSSESDPGLYAKGADLHCPCHGSIYALKDGGVVVSGPAPR----PLPIVILDYDS 155 (202)
T ss_dssp TTTTCEEEEESBCTTTCCBCCTTEEESSTTSSEEETTTTEEECTTTCCEEEGGGTSEEEESSCCS----CCCBEEEEECT
T ss_pred CCCCeEEEEeCcCCCCCCcccccccccccccccccCCCCEEEccCcCCEEcCCCCCeEeCCCCCC----CcCccEEEEeC
Confidence 468999999999999999997631 24578999999999995 59999999854 7899998865
Q ss_pred -cCeEEE
Q 013818 214 -EGMIWI 219 (436)
Q Consensus 214 -~G~I~v 219 (436)
.|.||+
T Consensus 156 ~~g~iyA 162 (202)
T d1jm1a_ 156 STGDIYA 162 (202)
T ss_dssp TTCEEEE
T ss_pred CCCeEEE
Confidence 599994
No 19
>d2b1xa2 d.129.3.3 (A:163-441) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
Probab=97.88 E-value=2.7e-05 Score=72.79 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=30.6
Q ss_pred CCcEEeE-EEEEEeecCchhhhhccC-CCCCCCCCCccc
Q 013818 237 SGFEIHA-EIVMELPIEHGLLLDNLL-DLAHAPFTHTST 273 (436)
Q Consensus 237 ~~~~~~~-~~~~~~~~nwk~~~EN~~-D~~H~~~vH~~t 273 (436)
.+.++.+ ..++.++||||+.+||++ |.||++++|.+.
T Consensus 24 ~glev~~g~~r~~i~~NWKl~~EN~~~D~YH~~~tH~S~ 62 (279)
T d2b1xa2 24 AGLQVVGAPQRWVIDANWKLGADNFVGDAYHTMMTHRSM 62 (279)
T ss_dssp SCEEECSCCEEEEESSCTHHHHHHHHHCCTTHHHHTHHH
T ss_pred CceEEecCceEEEEcCCCchhhhcCCCcCCCccccchhH
Confidence 3456554 567899999999999986 999999999854
No 20
>d2bmoa2 d.129.3.3 (A:153-439) Nitrobenzene dioxygenase alpha subunit, NBDO-alpha {Comamonas sp. JS765 [TaxId: 58226]}
Probab=97.75 E-value=1.2e-05 Score=75.14 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=29.8
Q ss_pred CcEEeE-EEEEEeecCchhhhhccC-CCCCCCCCCccc
Q 013818 238 GFEIHA-EIVMELPIEHGLLLDNLL-DLAHAPFTHTST 273 (436)
Q Consensus 238 ~~~~~~-~~~~~~~~nwk~~~EN~~-D~~H~~~vH~~t 273 (436)
+.++.+ ..++.++||||+.+||++ |.||++++|...
T Consensus 25 ~lev~~g~~r~~~~~NWKl~~ENf~~D~YH~~~~H~s~ 62 (287)
T d2bmoa2 25 GLELVGPPGKVVVKANWKSFAENFVGDGYHVGWTHAAA 62 (287)
T ss_dssp CEEEEEEEEEEEESSCHHHHHHHHHHBCTTHHHHTHHH
T ss_pred CeEEEcceEEEEECCCcchHhhcccccccCCCccchhH
Confidence 455544 557889999999999986 999999999854
No 21
>d2de6a2 d.129.3.3 (A:143-384) Terminal oxygenase component of carbazole CarAa {Janthinobacterium sp. j3 [TaxId: 213804]}
Probab=97.52 E-value=0.00014 Score=64.66 Aligned_cols=94 Identities=13% Similarity=0.162 Sum_probs=62.9
Q ss_pred eeEEEEEeecCCCCceeeeeeeeccchhhccCcch---HHHHHH-HHHHHHHhhHHHHHHHHHhhccCCCC-CCCccccC
Q 013818 335 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWR-HFAEQVLNEDLRLVLGQQERMNNGAN-VWNLPVGY 409 (436)
Q Consensus 335 ~~~~~~~~~P~s~~~tr~~~~~~~~~~~~~~~~p~---~~~~~~-~~~~~v~~ED~~ile~qq~~l~~g~~-~~~l~~~a 409 (436)
++.++-..+|+++++.+|+..+.+.-........| ++..|+ .....+.++|+..-|++|.=+..+.. ..+.....
T Consensus 137 ~~~qyEwYVPId~~~h~Y~q~l~k~~~t~ee~~~F~~efe~~wk~~al~gFNddDi~AReamq~FY~dd~GW~~E~L~~p 216 (242)
T d2de6a2 137 DMMQFEWYVPIDENTHYYFQTLGKPCANDEERKKYEQEFESKWKPMALEGFNNDDIWAREAMVDFYADDKGWVNEILFES 216 (242)
T ss_dssp TCEEEEEEEEEETTEEEEEEEEEEECSSHHHHHHHHHHHHHTHHHHTTTTTTHHHHHHHHHTHHHHHTSTHHHHCCCCGG
T ss_pred CceEEEEEEEecCCcEEEEEEEEeecCCHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHhhhhhccCCCCcHhhccCc
Confidence 46677677999999999988776532211111111 122222 22356788999999999886665422 12466789
Q ss_pred CHHHHHHHHHHHHHHccCC
Q 013818 410 DKLGVRYRLWRDALEKGAK 428 (436)
Q Consensus 410 D~~~v~~Rrwl~~l~~g~~ 428 (436)
|..++++||...+..+|..
T Consensus 217 D~~Ii~WRklaS~~nRGIq 235 (242)
T d2de6a2 217 DEAIVAWRKLASEHNQGIQ 235 (242)
T ss_dssp GHHHHHHHHHHHHHCSCBC
T ss_pred cccHHHHHHHHHHhccccC
Confidence 9999999999999988864
No 22
>d1ulia2 d.129.3.3 (A:171-451) Biphenyl dioxygenase large subunit BphA1, C-terminal domain {Rhodococcus sp. (strain RHA1) [TaxId: 101510]}
Probab=97.42 E-value=2.3e-05 Score=73.09 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=29.8
Q ss_pred CCcEEe-EEEEEEeecCchhhhhccC-CCCCCCCCCccc
Q 013818 237 SGFEIH-AEIVMELPIEHGLLLDNLL-DLAHAPFTHTST 273 (436)
Q Consensus 237 ~~~~~~-~~~~~~~~~nwk~~~EN~~-D~~H~~~vH~~t 273 (436)
.+.++. +..++.++||||+.+||++ |.||++++|...
T Consensus 24 ~g~ev~~g~~r~~~~~NWKl~~ENf~~D~YH~~~~H~~~ 62 (281)
T d1ulia2 24 AGTEAIPGIQKWVIPCNWKFAAEQFCSDMYHAGTTSHLS 62 (281)
T ss_dssp TCEEECSCCEEEEECSCHHHHHHHHHHBHHHHHTTTTHH
T ss_pred CceEEecCceEEEecCCCeehhhcCCCCCccchhhhhhH
Confidence 355554 3457889999999999987 999999999754
No 23
>d1wqla2 d.129.3.3 (A:181-459) Large subunit of cumene dioxygenase cumA1 {Pseudomonas fluorescens [TaxId: 294]}
Probab=97.27 E-value=0.00016 Score=67.27 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=28.5
Q ss_pred CCcEEe-EEEEEEeecCchhhhhccC-CCCCCCCCCcc
Q 013818 237 SGFEIH-AEIVMELPIEHGLLLDNLL-DLAHAPFTHTS 272 (436)
Q Consensus 237 ~~~~~~-~~~~~~~~~nwk~~~EN~~-D~~H~~~vH~~ 272 (436)
.++++. +..++.++||||+.+||+. |.||+..+|..
T Consensus 24 ~g~ev~~g~~r~~~~~NWKl~~ENf~~D~YH~~~~hh~ 61 (279)
T d1wqla2 24 AVTQVITGMQKTVIPCNWKFAAEQFCSDMYHAGTMAHL 61 (279)
T ss_dssp TCEEECSCCEEEEESSCHHHHHHHHHHBCHHHHTTTTH
T ss_pred CceEEeccceEeeecCCceehhhcCCCCCcChhhhhhh
Confidence 345544 3567889999999999975 99999888864
No 24
>d1vqov1 a.2.2.1 (V:1-65) Ribosomal protein L29 (L29p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=55.53 E-value=13 Score=25.43 Aligned_cols=44 Identities=18% Similarity=0.248 Sum_probs=28.9
Q ss_pred cchhhHHHHHHHHHHHHHHHH-HHhhhhH----HHHHHHHhhHHHHHHh
Q 013818 19 KSIGTMKKELAELQEDLAQAH-RQVHISE----ARVATALDKLAYMEAL 62 (436)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~ 62 (436)
+|...|.++|.+|.+||.+-+ .|....+ +++...-...|++..+
T Consensus 11 ls~~eL~~~l~elk~El~~LR~~q~~~gql~~~~~ik~~Rk~IARi~Tv 59 (65)
T d1vqov1 11 MTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTI 59 (65)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHH
Confidence 689999999999999999987 3443322 3444444444444443
No 25
>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.45 E-value=3.7 Score=23.05 Aligned_cols=8 Identities=38% Similarity=1.381 Sum_probs=6.5
Q ss_pred CCCCCCCC
Q 013818 159 TCAHRACP 166 (436)
Q Consensus 159 ~CpHrg~~ 166 (436)
.|||+||.
T Consensus 3 ~CphkgC~ 10 (28)
T d1ubdc1 3 ACPHKGCT 10 (28)
T ss_dssp ECCSTTCC
T ss_pred cCCcccHH
Confidence 49999985
No 26
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.69 E-value=24 Score=23.84 Aligned_cols=15 Identities=27% Similarity=0.651 Sum_probs=11.8
Q ss_pred hccchhhHHHHHHHH
Q 013818 17 DYKSIGTMKKELAEL 31 (436)
Q Consensus 17 ~~~~~~~~~~~~~~~ 31 (436)
+.+|||++..||..-
T Consensus 24 ~l~sV~diE~eLerC 38 (67)
T d1k1fa_ 24 ELRSVGDIEQELERA 38 (67)
T ss_dssp CCSSHHHHHHHHHHH
T ss_pred hhccHhHHHHHHHHH
Confidence 678999998887653
No 27
>d2zjrv1 a.2.2.1 (V:1-66) Ribosomal protein L29 (L29p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=34.38 E-value=42 Score=22.68 Aligned_cols=48 Identities=15% Similarity=0.180 Sum_probs=31.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhH----HHHHHHHhhHHHHHHhhhhh
Q 013818 19 KSIGTMKKELAELQEDLAQAHRQVHISE----ARVATALDKLAYMEALVNDR 66 (436)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 66 (436)
+|...|.++|.+|.+||-.-.-|....+ +++...-...+++..+.+.+
T Consensus 9 ~s~~eL~~~l~~lk~elf~LRfq~~tgql~n~~~ik~~Rk~IARi~Tvl~er 60 (66)
T d2zjrv1 9 LQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAEL 60 (66)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999887765544332 34444444555555544443
No 28
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.92 E-value=17 Score=23.06 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=19.1
Q ss_pred hhccchhhHHHHHHHHHHHHHHHH
Q 013818 16 RDYKSIGTMKKELAELQEDLAQAH 39 (436)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~ 39 (436)
.-+.-|.+|.+-|-+||+|+.+-+
T Consensus 22 ~R~dEV~~Le~NLreLq~e~~~qq 45 (46)
T d1yzma1 22 GRMDEVRTLQENLRQLQDEYDQQQ 45 (46)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhc
Confidence 334458899999999999998754
No 29
>d1r73a_ a.2.2.1 (A:) Ribosomal protein L29 (L29p) {Thermotoga maritima [TaxId: 2336]}
Probab=28.77 E-value=71 Score=21.42 Aligned_cols=47 Identities=13% Similarity=0.220 Sum_probs=29.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhhhH----HHHHHHHhhHHHHHHhhhh
Q 013818 19 KSIGTMKKELAELQEDLAQAHRQVHISE----ARVATALDKLAYMEALVND 65 (436)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 65 (436)
+|...|.++|.+|.+||.+..-|-...+ .++...-..+|++..+.+.
T Consensus 9 ls~~eL~~~l~~l~~el~~LRfq~~~gql~~~~~i~~~Rk~IARi~Tvl~e 59 (66)
T d1r73a_ 9 YTDEELKNLLEEKKRQLMELRFQLAMGQLKNTSLIKLTKRDIARIKTILRE 59 (66)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999887765533221 3344444445555544443
No 30
>d2hepa1 a.2.21.1 (A:1-42) Hypothetical protein YnzC {Bacillus subtilis [TaxId: 1423]}
Probab=25.21 E-value=24 Score=21.89 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=22.6
Q ss_pred hHHHHhhChhhhhccchhhH---HHHHHHHHHHHHHH
Q 013818 5 EKVVEVLNPLARDYKSIGTM---KKELAELQEDLAQA 38 (436)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 38 (436)
.+..+-+|+||+..|+.|-= ++|-+.|.+||.++
T Consensus 4 ~~~i~RINeLakK~K~~gLT~~E~~EQ~~LR~eYl~~ 40 (42)
T d2hepa1 4 NAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKG 40 (42)
T ss_dssp SHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 45567899999999986633 33445566666554
No 31
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.41 E-value=47 Score=25.15 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=23.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 013818 21 IGTMKKELAELQEDLAQAHRQVHISEARVATALD 54 (436)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 (436)
+..|++++..|++++.+...++...+..+...++
T Consensus 97 i~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~~ 130 (133)
T d1fxkc_ 97 KNELESTLQKMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567777777777777777777766666655544
No 32
>d2gycw1 a.2.2.1 (W:1-60) Ribosomal protein L29 (L29p) {Escherichia coli [TaxId: 562]}
Probab=21.97 E-value=38 Score=22.43 Aligned_cols=26 Identities=23% Similarity=0.243 Sum_probs=21.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhh
Q 013818 19 KSIGTMKKELAELQEDLAQAHRQVHI 44 (436)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 44 (436)
+|+..|.++|.+|.+||-+..-|...
T Consensus 9 ls~~eL~~~l~~l~~el~~lRfq~~~ 34 (60)
T d2gycw1 9 KSVEELNTELLNLLREQFNLRMQAAS 34 (60)
T ss_dssp SCHHHHHHHHHHHHHHHHHCCCSTTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999876655443
No 33
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=20.88 E-value=79 Score=22.53 Aligned_cols=60 Identities=18% Similarity=0.257 Sum_probs=32.5
Q ss_pred CchhhHHHHhhChhhhhccchh----hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhHHHHHHhhh
Q 013818 1 MLLHEKVVEVLNPLARDYKSIG----TMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVN 64 (436)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (436)
|.+|+++.|+-+ +.+...+. .+++.+..+..+++++=..-...+ ....+.||-++.++..
T Consensus 20 ME~RE~lee~~~--~~d~~~l~~l~~ei~~~~~~~~~~l~~~~~~~d~~~--A~~~~~kLkF~~kl~~ 83 (95)
T d1fpoa2 20 LELREELDEIEQ--AKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDA--AADTCRKLRFLDKLRS 83 (95)
T ss_dssp HHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH--HHHHHHHhHHHHHHHH
Confidence 567888887732 22222233 345555555556665544333333 3355777888776654
Done!