Query 013822
Match_columns 436
No_of_seqs 114 out of 1357
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 17:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-101 4E-106 813.2 40.8 425 9-436 84-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 2E-100 6E-105 806.0 44.1 427 9-436 84-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 3E-99 1E-103 797.5 46.8 427 9-436 84-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 3E-100 1E-104 804.9 36.3 428 9-436 85-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.4E-83 8.4E-88 680.4 32.9 403 9-436 89-579 (590)
6 3iyg_H T-complex protein 1 sub 100.0 4.5E-81 1.5E-85 656.7 40.4 376 9-436 81-507 (515)
7 3ruv_A Chaperonin, CPN; double 100.0 3.9E-81 1.3E-85 661.0 40.0 373 9-436 89-512 (543)
8 3iyg_B T-complex protein 1 sub 100.0 8.2E-81 2.8E-85 654.9 40.4 372 9-436 82-504 (513)
9 3ko1_A Chaperonin; 9-fold symm 100.0 4.6E-81 1.6E-85 660.8 38.0 373 9-436 100-526 (553)
10 3aq1_B Thermosome subunit; gro 100.0 9.8E-81 3.3E-85 652.4 38.6 373 9-436 43-469 (500)
11 3p9d_A T-complex protein 1 sub 100.0 2.7E-81 9.3E-86 663.8 34.4 378 9-436 94-541 (559)
12 1q3q_A Thermosome alpha subuni 100.0 3.1E-80 1E-84 654.8 39.3 373 9-436 93-518 (548)
13 3iyg_E T-complex protein 1 sub 100.0 1.2E-79 4E-84 646.8 41.8 381 8-436 79-508 (515)
14 1a6d_A Thermosome (alpha subun 100.0 3.5E-80 1.2E-84 653.9 37.8 373 8-436 91-515 (545)
15 3iyg_D T-complex protein 1 sub 100.0 9.5E-80 3.2E-84 647.5 39.3 380 9-436 81-511 (518)
16 3iyg_A T-complex protein 1 sub 100.0 8.9E-80 3E-84 649.2 39.2 378 9-436 80-521 (529)
17 3p9d_D T-complex protein 1 sub 100.0 8E-81 2.7E-85 656.6 31.1 377 9-436 89-521 (528)
18 1a6d_B Thermosome (beta subuni 100.0 7.8E-80 2.7E-84 651.5 36.8 374 8-436 90-516 (543)
19 3iyg_Q T-complex protein 1 sub 100.0 8.8E-79 3E-83 639.7 40.1 379 9-436 81-505 (512)
20 3p9d_E T-complex protein 1 sub 100.0 6.5E-79 2.2E-83 646.0 35.0 379 9-436 115-551 (562)
21 3iyg_Z T-complex protein 1 sub 100.0 1.7E-78 5.7E-83 637.5 37.0 372 9-436 80-510 (517)
22 3p9d_B T-complex protein 1 sub 100.0 6.5E-80 2.2E-84 650.3 26.0 372 9-436 88-511 (527)
23 3iyg_G T-complex protein 1 sub 100.0 1E-77 3.5E-82 631.6 40.6 373 9-436 79-507 (515)
24 3p9d_G T-complex protein 1 sub 100.0 1.3E-79 4.4E-84 649.8 25.3 375 9-436 94-520 (550)
25 3p9d_F T-complex protein 1 sub 100.0 1.3E-77 4.3E-82 635.0 27.2 373 9-436 87-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 1.4E-76 4.9E-81 628.7 19.0 374 8-436 95-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 8.2E-52 2.8E-56 371.3 14.4 189 110-298 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 3.4E-50 1.2E-54 361.5 16.0 185 113-297 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.4E-40 4.7E-45 285.5 14.8 144 115-258 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 3.4E-22 1.2E-26 181.6 13.4 144 109-306 3-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 1.3E-18 4.3E-23 155.2 13.7 127 113-262 1-154 (159)
32 2lnd_A De novo designed protei 35.1 80 0.0027 23.9 5.5 51 151-201 35-85 (112)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-101 Score=813.20 Aligned_cols=425 Identities=34% Similarity=0.502 Sum_probs=409.3
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchhHHHHHHH
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAK 87 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~~~~l~~vA~ts~~~~~~~~~li~~ 87 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++++|+++.++|.+||++|++ ++.+++++++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liad 162 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAE 162 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHH
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHH
Confidence 699999999999999999999999 99999999999999999999999999999998999999999998 8899999999
Q ss_pred HHHhcccCCceeeecCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcC
Q 013822 88 VFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQG 167 (436)
Q Consensus 88 a~~~vg~~~~I~v~~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~ 167 (436)
|+.+++.+|.|+|+++++..+++++++||+||++|.||||++++++|+.+++||+|+++|++|+++++++++++++.++|
T Consensus 163 Av~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g 242 (546)
T 3rtk_A 163 AMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAG 242 (546)
T ss_dssp HHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTT
T ss_pred HHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcC
Confidence 99999999999999888887889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 013822 168 QSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 247 (436)
Q Consensus 168 ~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~ 247 (436)
+|+||++++|+++||++|+.|+++|++++++||.|+||++|+++|+|||++|||++++++.+++++++++++||+|++|+
T Consensus 243 ~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~ 322 (546)
T 3rtk_A 243 KPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV 322 (546)
T ss_dssp CCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred EecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHH
Q 013822 248 ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 323 (436)
Q Consensus 248 i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 323 (436)
+++++|+||+||+++++++.|+++|+++++.++| ++|+|||++|+|++|||+|||+|+.+++|+||+++||||++|
T Consensus 323 i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r 402 (546)
T 3rtk_A 323 VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAK 402 (546)
T ss_dssp ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHH
T ss_pred EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888 899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCC
Q 013822 324 AAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARG 402 (436)
Q Consensus 324 ~al~~gvV~GGGa~e~~~s~~L~~~~~~~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~~~~~~G~d~~~g 402 (436)
+++++|+|||||++|++++++|++++ .++++|+|+++|++||+.||++||+|||+|+.++ ++|++. ..++|||+.+|
T Consensus 403 ~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g 480 (546)
T 3rtk_A 403 AAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTG 480 (546)
T ss_dssp HHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSC
T ss_pred HHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCC
Confidence 99999999999999999999999887 7899999999999999999999999999999999 999885 35699999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 403 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 403 ~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 481 ~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 481 VYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp CCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.8e-100 Score=806.02 Aligned_cols=427 Identities=36% Similarity=0.523 Sum_probs=415.9
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchhHHHHHHH
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAK 87 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~~~~l~~vA~ts~~~~~~~~~li~~ 87 (436)
+||||||++|||++||+++++++. |+||+.|++||++|++.++++|+++++|+++.++|.+||++|++++++|++++++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liad 163 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAE 163 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHH
Confidence 699999999999999999999999 9999999999999999999999999999998899999999999889999999999
Q ss_pred HHHhcccCCceeeecCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcC
Q 013822 88 VFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQG 167 (436)
Q Consensus 88 a~~~vg~~~~I~v~~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~ 167 (436)
|+.+++.++.|+|++|+++++++++++|++||+||.||||++++++|+.+++||+|+++|++|+++++++++++++.++|
T Consensus 164 Av~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g 243 (547)
T 1kp8_A 164 AMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAG 243 (547)
T ss_dssp HHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGG
T ss_pred HHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999998877999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 013822 168 QSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 247 (436)
Q Consensus 168 ~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~ 247 (436)
+||||++++|+++||++|+.|++++.++|+|||+|+||++|+++|+|||++|||++++++.+++++++++++||+|+.|+
T Consensus 244 ~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~ 323 (547)
T 1kp8_A 244 KPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVV 323 (547)
T ss_dssp CCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE
T ss_pred CCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred EecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHH
Q 013822 248 ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 323 (436)
Q Consensus 248 i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 323 (436)
+++++|+||+||+++++++.|+++|+.+++.++| ++|+||+++|+|++|||+|||+|+++++|+||+++||||++|
T Consensus 324 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r 403 (547)
T 1kp8_A 324 INKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATR 403 (547)
T ss_dssp ECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888 999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCC
Q 013822 324 AAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARG 402 (436)
Q Consensus 324 ~al~~gvV~GGGa~e~~~s~~L~~~~~~~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~~~~~~G~d~~~g 402 (436)
+++++|+|||||++|++++++|++++..++++|+|+++|++||+.||++||+|||+|+.++ ++|++. +.++|||+.+|
T Consensus 404 ~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g 482 (547)
T 1kp8_A 404 AAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATE 482 (547)
T ss_dssp HHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTT
T ss_pred HhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCC
Confidence 9999999999999999999999988666889999999999999999999999999999999 999875 57899999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 403 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 403 ~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 483 ~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 483 EYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp EEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred ccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3e-99 Score=797.50 Aligned_cols=427 Identities=37% Similarity=0.549 Sum_probs=415.4
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchhHHHHHHH
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAK 87 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~~~~l~~vA~ts~~~~~~~~~li~~ 87 (436)
+||||||+||||++||+++++++. |+||+.|++||++|++.++++|+++++|+++.++|.+||++|++ ++.|++++++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~d 162 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIAD 162 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHH
Confidence 699999999999999999999999 99999999999999999999999999999988999999999998 8999999999
Q ss_pred HHHhcccCCceeeecCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcC
Q 013822 88 VFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQG 167 (436)
Q Consensus 88 a~~~vg~~~~I~v~~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~ 167 (436)
|+.+++.++.|+|++|+++++++++++|++||+||.||||++++++|..+++||+|+++|++|+++++++++++++.++|
T Consensus 163 Av~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g 242 (543)
T 1we3_A 163 AMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTG 242 (543)
T ss_dssp HHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTT
T ss_pred HHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcC
Confidence 99999999999999999998877999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 013822 168 QSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 247 (436)
Q Consensus 168 ~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~ 247 (436)
+|+||++++|+++||++|+.|++++.++|+|||+|+||++|+++|+|||++|||++++++.+++++++++++||+|+.|+
T Consensus 243 ~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~ 322 (543)
T 1we3_A 243 KPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR 322 (543)
T ss_dssp CCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEE
T ss_pred CCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred EecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHH
Q 013822 248 ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 323 (436)
Q Consensus 248 i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 323 (436)
+++++|+||+||+++++++.|+++|+.+++.++| ++|+||+++|+|++|||+|||+|+++++|+||+++||||++|
T Consensus 323 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r 402 (543)
T 1we3_A 323 ITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATR 402 (543)
T ss_dssp ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888 899999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCC
Q 013822 324 AAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPA 400 (436)
Q Consensus 324 ~al~~gvV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~-~~~~~G~d~~ 400 (436)
+++++|+|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ ++|++. ++.++|||+.
T Consensus 403 ~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~ 482 (543)
T 1we3_A 403 AAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAA 482 (543)
T ss_dssp HHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETT
T ss_pred HHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCC
Confidence 9999999999999999999999999874 899999999999999999999999999999999 999873 4578999999
Q ss_pred CCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 401 RGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 401 ~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 483 ~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 483 TGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp TTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.8e-100 Score=804.94 Aligned_cols=428 Identities=37% Similarity=0.558 Sum_probs=374.3
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHhcCCchhHHHHHHH
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAK 87 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~~~~l~~vA~ts~~~~~~~~~li~~ 87 (436)
+||||||+||||++||+++++++. |+||+.|++||++|++.++++|+++++|+++.++|.+||++|+++++.|++++++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~d 164 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAE 164 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHH
Confidence 699999999999999999999999 9999999999999999999999999999988889999999999989999999999
Q ss_pred HHHhcccCCceeeecCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcC
Q 013822 88 VFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQG 167 (436)
Q Consensus 88 a~~~vg~~~~I~v~~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~ 167 (436)
|+.+++.++.|+|++|+++++++++++|++||+||.||||++++++|+.+++||+|+++|++|+++++++++++++.++|
T Consensus 165 Av~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g 244 (545)
T 1iok_A 165 AMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQ 244 (545)
T ss_dssp HHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------C
T ss_pred HHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcC
Confidence 99999999999999999998877999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE
Q 013822 168 QSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 247 (436)
Q Consensus 168 ~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~ 247 (436)
+||||++++|+++||++|+.|++++.++|+|||+|+||++|+++|+|||++|||++++++.+++++++++++||+|+.|+
T Consensus 245 ~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~ 324 (545)
T 1iok_A 245 KPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVS 324 (545)
T ss_dssp CCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEE
T ss_pred CCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred EecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHH
Q 013822 248 ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 323 (436)
Q Consensus 248 i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k 323 (436)
+++++|+||+||++++++++|+++++.+++.++| ++|+|||++|+|++|||+|||+|+++++|+||+++||||++|
T Consensus 325 ~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r 404 (545)
T 1iok_A 325 INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATR 404 (545)
T ss_dssp ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888 999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCchHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCC
Q 013822 324 AAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARG 402 (436)
Q Consensus 324 ~al~~gvV~GGGa~e~~~s~~L~~~~~~~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~~~~~~G~d~~~g 402 (436)
+++++|+|||||++|++++++|++++..++++|+|+++|++||+.||++||+|||+|+.++ ++|++..++++|||+.+|
T Consensus 405 ~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g 484 (545)
T 1iok_A 405 AAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTE 484 (545)
T ss_dssp HHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTT
T ss_pred HHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCC
Confidence 9999999999999999999999988666889999999999999999999999999999999 999875457899999999
Q ss_pred ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 403 NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 403 ~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 485 ~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 485 EYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.4e-83 Score=680.40 Aligned_cols=403 Identities=14% Similarity=0.148 Sum_probs=331.8
Q ss_pred ccCCcchHHHHHHHHHHHHHhh-cc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCC--HHHHHHHHHHhcC------Cc
Q 013822 9 LFAGTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVRNLDCQARKITT--FEEIAQVGTTAAN------GD 78 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~l-i~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~--~~~l~~vA~ts~~------~~ 78 (436)
+||||||++|||++||++|+++ +. |+||+.|++||++|++.++++|+++++|++. ++.|.++|+||++ ++
T Consensus 89 ~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~ 168 (590)
T 3p9d_C 89 VGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWS 168 (590)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGH
T ss_pred hCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccH
Confidence 7999999999999999999999 99 9999999999999999999999999999873 6789999998864 36
Q ss_pred hhHHHHHHHHHHhcccCCc----------------eeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecC
Q 013822 79 GEIGELIAKVFEKGWENDL----------------ITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDG 140 (436)
Q Consensus 79 ~~~~~li~~a~~~vg~~~~----------------I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~ 140 (436)
+.|++++++|+.+++.++. |+|+ +|++.. ++++++||+||+++.||.| +.+++|
T Consensus 169 ~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~-ds~lv~Gmvfdk~~~~~~m-------~~~~en 240 (590)
T 3p9d_C 169 EKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVL-DSRVLKGVLLNKDVVHPKM-------SRHIEN 240 (590)
T ss_dssp HHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGG-GCBCCSSEEECCCCSCTTS-------CSCEES
T ss_pred HHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcc-cceeeeEEEEecccCCCCC-------cceeee
Confidence 7899999999999987643 4454 366665 5999999999999988855 357999
Q ss_pred ceEEEeccc-------------cCCHHHHHHHH-----------HHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccE
Q 013822 141 ALVLIYDTK-------------ISNSNVIRQAS-----------LPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKV 196 (436)
Q Consensus 141 p~Il~~d~~-------------i~~~~~i~~~l-----------e~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i 196 (436)
|+|+++|++ +++++++.+++ +++.++|..++|+.++|+++|+++|+.++ |
T Consensus 241 ~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~------I 314 (590)
T 3p9d_C 241 PRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG------C 314 (590)
T ss_dssp CCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT------C
T ss_pred eEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc------c
Confidence 999999984 34566665554 67888874444445569999999999774 4
Q ss_pred EEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-eeEEE---EecceEEEEcCCCChhh--------
Q 013822 197 CIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVI---ATMDNVVIIGGSGELVD-------- 264 (436)
Q Consensus 197 ~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~-a~~v~---i~~~~~~~~~~~~~~~~-------- 264 (436)
++ |++.|+.+|+|||++|||+++++ ++++++++||+ |+.|+ +++++|+||+||+++++
T Consensus 315 ~a-----v~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~ 384 (590)
T 3p9d_C 315 SV-----LRRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQ 384 (590)
T ss_dssp CC-----CCCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBCCCSEEECCEETTEECEEECC--------------
T ss_pred ee-----eccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccc
Confidence 45 56778899999999999999996 89999999999 99985 68899999999999988
Q ss_pred ------------------HHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHH
Q 013822 265 ------------------IQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 326 (436)
Q Consensus 265 ------------------i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al 326 (436)
++.|+++++.+++.++|+ +.+|+++|+||+|||+|||+|+++++|+||+++||||++|+++
T Consensus 385 ~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~-~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av 463 (590)
T 3p9d_C 385 FEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGH-HHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVM 463 (590)
T ss_dssp --------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhcchhhHHHHHHHHHHHHHHhccCCH-HHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988773 3366899999999999999999999999999999999999999
Q ss_pred Hc-CCCCCchHHHHHHHHHHHHhcC-CChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC
Q 013822 327 EE-GIVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 400 (436)
Q Consensus 327 ~~-gvV~GGGa~e~~~s~~L~~~~~-~~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~ 400 (436)
++ |+|||||++|++++++|++++. .++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.
T Consensus 464 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~ 543 (590)
T 3p9d_C 464 LSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGD 543 (590)
T ss_dssp HCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTT
T ss_pred hcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCC
Confidence 98 5999999999999999999865 4899999999999999999999999999999999 999873 5678999999
Q ss_pred CCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 401 RGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 401 ~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 544 ~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 544 KGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp SSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred CCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.5e-81 Score=656.74 Aligned_cols=376 Identities=15% Similarity=0.157 Sum_probs=340.1
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--C----HHHHHHHHHHhcC-----
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--T----FEEIAQVGTTAAN----- 76 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~----~~~l~~vA~ts~~----- 76 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ + ++.|.++|+||++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 799999999999999999999999 999999999999999999999999999984 5 5667999998774
Q ss_pred -CchhHHHHHHHHHHhcccC---Cceeeec--CCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccc-
Q 013822 77 -GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK- 149 (436)
Q Consensus 77 -~~~~~~~li~~a~~~vg~~---~~I~v~~--g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~- 149 (436)
+++.|++++++|+.+++.+ +.|+|+. |++. +++++++||+||++|.||||.++|+ +++||+|+++|++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~L 235 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL-EESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVEL 235 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-cceEEEeeeEEecCccCcccccCCc----cccccEEEEEcccc
Confidence 4678999999999999876 7788874 5555 4799999999999999999987666 7999999999984
Q ss_pred ------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCcc
Q 013822 150 ------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAE 206 (436)
Q Consensus 150 ------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~ 206 (436)
|++++++ .++++++.++|+|+||++++|++.++++|..+ +|++++ +
T Consensus 236 e~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~v~-----~ 304 (515)
T 3iyg_H 236 ELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFCAG-----R 304 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCcccc-----c
Confidence 6677665 66789999999999999999999888877533 356664 5
Q ss_pred chhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHH
Q 013822 207 DRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDK 283 (436)
Q Consensus 207 ~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~ 283 (436)
.++++|||||++|||+++++ ++++++++||+|+.|++. +++|+||++|+++.
T Consensus 305 ~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~-------------------- 359 (515)
T 3iyg_H 305 VPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAK-------------------- 359 (515)
T ss_pred ccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCc--------------------
Confidence 67889999999999999997 899999999999999754 78999999998764
Q ss_pred HHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHc-CCCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHH
Q 013822 284 LKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQI 361 (436)
Q Consensus 284 l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~-gvV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~ 361 (436)
.|||++||+|+++++|+||+++||||++|+++++ ++|||||++|++++++|++++.. ++++|+|+++
T Consensus 360 -----------~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~ 428 (515)
T 3iyg_H 360 -----------TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGA 428 (515)
T ss_pred -----------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 5999999999999999999999999999999998 69999999999999999998764 8999999999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 362 VQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 362 ~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999874 3567999999999999999999999999999999999999999986
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.9e-81 Score=660.99 Aligned_cols=373 Identities=19% Similarity=0.254 Sum_probs=342.2
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------ch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~~------~~ 79 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ ++
T Consensus 89 ~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~ 168 (543)
T 3ruv_A 89 VGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKE 168 (543)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCH
T ss_pred hCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHH
Confidence 799999999999999999999999 999999999999999999999999999987 788999999999863 78
Q ss_pred hHHHHHHHHHHhcccC-Cc-----eeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccc--
Q 013822 80 EIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-- 149 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~-~~-----I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~-- 149 (436)
.|++++++|+.+++.+ |. |+|+ .|++. +++++++||+||++|.||||+ .+++||+|+++|++
T Consensus 169 ~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v~dk~~~~~~m~-------~~~~n~kIll~~~~Le 240 (543)
T 3ruv_A 169 KLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVLVDKERVSAQMP-------KKVTDAKIALLNCAIE 240 (543)
T ss_dssp HHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEEESCCCSCTTSC-------SEEEEEEEEEESSCBS
T ss_pred HHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceEEeccccCcccc-------ccccCcEEEEEccccc
Confidence 9999999999999877 64 7776 46565 479999999999999999985 37899999999984
Q ss_pred -----------cCCHHH-----------HHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccc
Q 013822 150 -----------ISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAED 207 (436)
Q Consensus 150 -----------i~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~ 207 (436)
|+++++ +.++++++.++|+|+||++++|+++++++|+.+ +|++|++ .
T Consensus 241 ~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~~-----v 309 (543)
T 3ruv_A 241 IKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAARR-----V 309 (543)
T ss_dssp CCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEECS-----C
T ss_pred ccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEee-----C
Confidence 556655 667789999999999999999999999999854 4788875 4
Q ss_pred hhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHH
Q 013822 208 RKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKL 284 (436)
Q Consensus 208 r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~l 284 (436)
++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|++++.
T Consensus 310 ~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~-------------------- 364 (543)
T 3ruv_A 310 KKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKA-------------------- 364 (543)
T ss_dssp CHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSS--------------------
T ss_pred CHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCCceEEEEECCCCCce--------------------
Confidence 6789999999999999996 899999999999999754 889999999988753
Q ss_pred HHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHHH
Q 013822 285 KDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIV 362 (436)
Q Consensus 285 ~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~~ 362 (436)
|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|+++|
T Consensus 365 -----------~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~ 433 (543)
T 3ruv_A 365 -----------VTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAF 433 (543)
T ss_dssp -----------EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred -----------eEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHH
Confidence 8999999999999999999999999999999999 9999999999999999998754 89999999999
Q ss_pred HHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 363 QNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 363 a~AL~~ip~~La~NaG~d~~~i-~~l~~~----~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 434 a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 434 ADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp HHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999 999863 3478999999999999999999999999999999999999999997
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.2e-81 Score=654.86 Aligned_cols=372 Identities=17% Similarity=0.212 Sum_probs=340.1
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC-----CHHHHHHHHHHhcC------
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT-----TFEEIAQVGTTAAN------ 76 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~-----~~~~l~~vA~ts~~------ 76 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +.+.|.++|+||++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 799999999999999999999999 999999999999999999999999999987 46789999997764
Q ss_pred CchhHHHHHHHHHHhcccC---Cceeeec--CCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecc---
Q 013822 77 GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT--- 148 (436)
Q Consensus 77 ~~~~~~~li~~a~~~vg~~---~~I~v~~--g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~--- 148 (436)
+++.|++++++|+.+++.+ +.|+|+. |++.. ++++++||+||++|.|| | +.+++||+|+++|+
T Consensus 162 ~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~-ds~lv~G~v~dk~~~~~-m-------~~~~en~kIll~~~~Le 232 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLA-DSYLDEGFLLDKKIGVN-Q-------PKRIENAKILIANTGMD 232 (513)
T ss_pred chHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCcc-ceeEEeeEEEeccccCC-C-------ceeecCceEEEEcCCcc
Confidence 4678999999999999987 7888864 65554 69999999999999988 3 34799999999998
Q ss_pred -----------ccCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCcc
Q 013822 149 -----------KISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAE 206 (436)
Q Consensus 149 -----------~i~~~~~i~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~ 206 (436)
++++++++.+ +++++.++|+|+||++++|+++++++|..+ +|+|||+|++
T Consensus 233 ~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~~~-- 304 (513)
T 3iyg_B 233 TDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHADF-- 304 (513)
T ss_pred cccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecCCH--
Confidence 4667776654 688899999999999999999999999864 5899999975
Q ss_pred chhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHH
Q 013822 207 DRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDK 283 (436)
Q Consensus 207 ~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~ 283 (436)
.+|+|||++|||+++++ ++++++++||+|+.|+ ++++++++|.||+++
T Consensus 305 ---~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------------- 355 (513)
T 3iyg_B 305 ---VGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALG--------------------- 355 (513)
T ss_pred ---HHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEECCeEEEEEecCCCC---------------------
Confidence 45999999999999996 8999999999999986 788999999999764
Q ss_pred HHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHc-CCCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHH
Q 013822 284 LKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQI 361 (436)
Q Consensus 284 l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~-gvV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~ 361 (436)
++|||+|||+|+++++|+||+++||||++|+++++ ++|||||++|++++++|++++.. ++++|+|+++
T Consensus 356 ----------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~ 425 (513)
T 3iyg_B 356 ----------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMES 425 (513)
T ss_pred ----------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHH
Confidence 46999999999999999999999999999999998 69999999999999999998764 8999999999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 362 VQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 362 ~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 426 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 426 YAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999873 4578999999999999999999999999999999999999999986
No 9
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.6e-81 Score=660.80 Aligned_cols=373 Identities=20% Similarity=0.281 Sum_probs=342.5
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------ch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~~------~~ 79 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ ++
T Consensus 100 ~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~ 179 (553)
T 3ko1_A 100 TADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGARE 179 (553)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHH
T ss_pred ccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHH
Confidence 799999999999999999999999 999999999999999999999999999987 788999999999875 68
Q ss_pred hHHHHHHHHHHhcccC--Cc-------eeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecc
Q 013822 80 EIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT 148 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~--~~-------I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~ 148 (436)
.|++++++|+.+++.+ |. |+|+ .|++. +++++++||+||++|.||||+. +++||+|+++|+
T Consensus 180 ~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~dk~~~~~~m~~-------~ien~kIll~d~ 251 (553)
T 3ko1_A 180 YIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVYGIVVDKEVVHPGMPK-------RLENAKIALIDA 251 (553)
T ss_dssp HHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEESEEEECSCBSCTTSCS-------CCBSCEEEEECS
T ss_pred HHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeEEEEecccccCCCCcc-------ccccceEEEecC
Confidence 9999999999999875 65 8887 45555 5799999999999999999853 789999999998
Q ss_pred -------------ccCCHHH-----------HHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCC
Q 013822 149 -------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 204 (436)
Q Consensus 149 -------------~i~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~ 204 (436)
+|+++++ +.++++++.++|+|+||++++|+++++++|+.+ +|++|++
T Consensus 252 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~~--- 322 (553)
T 3ko1_A 252 SLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVRR--- 322 (553)
T ss_dssp CBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEECC---
T ss_pred cccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhhh---
Confidence 4667766 567789999999999999999999999999854 4788875
Q ss_pred ccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccc
Q 013822 205 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTS 281 (436)
Q Consensus 205 ~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s 281 (436)
.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|++++
T Consensus 323 --v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~------------------ 377 (553)
T 3ko1_A 323 --AKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPK------------------ 377 (553)
T ss_dssp --CCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSS------------------
T ss_pred --hhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhhcCcceEEEeccCCCCc------------------
Confidence 46789999999999999996 899999999999999864 88999999998875
Q ss_pred HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHH
Q 013822 282 DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGV 359 (436)
Q Consensus 282 ~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~ 359 (436)
.|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|+
T Consensus 378 -------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 444 (553)
T 3ko1_A 378 -------------SISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAV 444 (553)
T ss_dssp -------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHH
T ss_pred -------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHH
Confidence 48999999999999999999999999999999999 9999999999999999998764 89999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHh
Q 013822 360 QIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKN 434 (436)
Q Consensus 360 ~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~-~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL 434 (436)
++|++||+.||++||+|||+|+.++ .+|++. ++ +++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 445 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL 524 (553)
T 3ko1_A 445 EAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVL 524 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEE
Confidence 9999999999999999999999999 999874 23 689999999999999999999999999999999999999999
Q ss_pred cC
Q 013822 435 AI 436 (436)
Q Consensus 435 ~i 436 (436)
+|
T Consensus 525 ~i 526 (553)
T 3ko1_A 525 RI 526 (553)
T ss_dssp HE
T ss_pred eh
Confidence 86
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=9.8e-81 Score=652.42 Aligned_cols=373 Identities=18% Similarity=0.248 Sum_probs=339.1
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcC------Cch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAAN------GDG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~------~~~ 79 (436)
+||||||++|||++||+++++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++ +++
T Consensus 43 ~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~ 122 (500)
T 3aq1_B 43 VGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKE 122 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHH
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHH
Confidence 799999999999999999999999 999999999999999999999999999986 47899999997754 578
Q ss_pred hHHHHHHHHHHhcccC--Cc--------eeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEec
Q 013822 80 EIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYD 147 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~--~~--------I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d 147 (436)
.|++++++|+.+++.+ |. |+|+ +|++.. ++++++|++||++|.||||+. +++||+|+++|
T Consensus 123 ~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~i~n~kIll~~ 194 (500)
T 3aq1_B 123 KLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSID-DSELIDGLVIDKERSHPNMPE-------KVENAKILLLS 194 (500)
T ss_dssp HHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGG-GCEEESEEEESCCCSSTTSCS-------EEEEEEEEEES
T ss_pred HHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCcc-ceEEEeeeEEeecCCCCCCcc-------cccCCEEEEEe
Confidence 8999999999999865 43 6776 688875 799999999999999999843 78999999999
Q ss_pred cc-------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCC
Q 013822 148 TK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAG 203 (436)
Q Consensus 148 ~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~ 203 (436)
++ |++++++ .+.++++.++|+|+||++++|+++|+++|+.|+ |+||+
T Consensus 195 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~--- 265 (500)
T 3aq1_B 195 CPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR--- 265 (500)
T ss_dssp SCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC---
T ss_pred CCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE---
Confidence 98 5666664 899999999999999999999999999999874 78886
Q ss_pred CccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhcc
Q 013822 204 LAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLST 280 (436)
Q Consensus 204 ~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~ 280 (436)
+.|+++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||+||+++
T Consensus 266 --~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 320 (500)
T 3aq1_B 266 --RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNS------------------ 320 (500)
T ss_dssp --SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTC------------------
T ss_pred --eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEEEecCeEEEEEECCCCC------------------
Confidence 567899999999999999996 899999999999999865 8899999999765
Q ss_pred cHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcC-CChhHHHH
Q 013822 281 SDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQT-TNSDQKIG 358 (436)
Q Consensus 281 s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~-~~~~~~~g 358 (436)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++. .++++|++
T Consensus 321 -------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~ 387 (500)
T 3aq1_B 321 -------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLA 387 (500)
T ss_dssp -------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHH
T ss_pred -------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHH
Confidence 469999999999999999999999999999999999 999999999999999999875 48899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHh
Q 013822 359 VQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKN 434 (436)
Q Consensus 359 ~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL 434 (436)
+++|++||+.||++||+|||+|+.++ .+|++. +..++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 388 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL 467 (500)
T 3aq1_B 388 VSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMIL 467 (500)
T ss_dssp HHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999863 44689999999999999999999999999999999999999999
Q ss_pred cC
Q 013822 435 AI 436 (436)
Q Consensus 435 ~i 436 (436)
+|
T Consensus 468 ~i 469 (500)
T 3aq1_B 468 RI 469 (500)
T ss_dssp CC
T ss_pred HH
Confidence 97
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.7e-81 Score=663.78 Aligned_cols=378 Identities=18% Similarity=0.258 Sum_probs=343.7
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHh-hcccCCC--HHHHHHHHHHhcCC------c
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QARKITT--FEEIAQVGTTAANG------D 78 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~-~s~~i~~--~~~l~~vA~ts~~~------~ 78 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|++ +++|++. .+.|.+||+||+++ +
T Consensus 94 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~ 173 (559)
T 3p9d_A 94 IGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADS 173 (559)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchh
Confidence 799999999999999999999999 999999999999999999999999 9999974 57899999999985 7
Q ss_pred hhHHHHHHHHHHhccc-----CCc-----eeeec--CCCccceeEEeeeEEEeccccccccccccccceeeec--CceEE
Q 013822 79 GEIGELIAKVFEKGWE-----NDL-----ITIFD--RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLD--GALVL 144 (436)
Q Consensus 79 ~~~~~li~~a~~~vg~-----~~~-----I~v~~--g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~--~p~Il 144 (436)
+.|++++++|+.++++ ++. |+|+. |++.. ++++++||+||++|.||||++ .++ ||+|+
T Consensus 174 ~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~lv~G~v~dk~~~~~~m~~-------~ie~~n~kIl 245 (559)
T 3p9d_A 174 DFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLLVPGYALNCTVASQAMPK-------RIAGGNVKIA 245 (559)
T ss_dssp HHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBCCSEECCCCCCSSTTSCS-------EECSSSBCEE
T ss_pred HHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeEeccEEEeecccCCCcce-------eeccCCceEE
Confidence 8999999999999983 244 44443 77776 599999999999999999863 677 99999
Q ss_pred Eecccc-------------CCHHH-----------HHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEE
Q 013822 145 IYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIK 200 (436)
Q Consensus 145 ~~d~~i-------------~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk 200 (436)
++|++| +++++ +.++++++.++|+||||++++|+++|+++|+.|+ |++|+
T Consensus 246 l~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~av~ 319 (559)
T 3p9d_A 246 CLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMGVR 319 (559)
T ss_dssp EETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEEES
T ss_pred EEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------CceEc
Confidence 999886 33333 6888999999999999999999999999999885 67876
Q ss_pred eCCCccchhhHHHHHHHHhCCeEeeCCCCCCc-CCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHh
Q 013822 201 AAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTI 276 (436)
Q Consensus 201 ~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~-~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l 276 (436)
+.|+.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|+||+||+++
T Consensus 320 -----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 380 (559)
T 3p9d_A 320 -----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH-------------- 380 (559)
T ss_dssp -----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSS--------------
T ss_pred -----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCC--------------
Confidence 567889999999999999998766654 889999999999997 689999999999764
Q ss_pred hhcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-Chh
Q 013822 277 KLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSD 354 (436)
Q Consensus 277 ~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~ 354 (436)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++++|++++.. +++
T Consensus 381 -----------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 443 (559)
T 3p9d_A 381 -----------------SSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSR 443 (559)
T ss_dssp -----------------CCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTT
T ss_pred -----------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChH
Confidence 569999999999999999999999999999999998 9999999999999999999765 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC------------CeeEeCCCCccccccccCccccccc
Q 013822 355 QKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS------------DLGYNPARGNYVDMFKCGDVDPLKH 418 (436)
Q Consensus 355 ~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~------------~~G~d~~~g~~~d~~~~gI~Dp~~v 418 (436)
+|+|+++|++||+.||++||+|||+|+.++ .+|++. ++. ++|||+.+|++.||++.|||||+.|
T Consensus 444 eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 523 (559)
T 3p9d_A 444 EQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTIS 523 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHH
Confidence 999999999999999999999999999999 999863 333 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 013822 419 VPSEFAKATSMISLKNAI 436 (436)
Q Consensus 419 ~~~al~~A~~~a~~iL~i 436 (436)
|+++|++|+|+|++||||
T Consensus 524 k~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 524 KVKSLKSALEACVAILRI 541 (559)
T ss_dssp HHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999999986
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.1e-80 Score=654.80 Aligned_cols=373 Identities=18% Similarity=0.272 Sum_probs=344.7
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcC------Cch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAAN------GDG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~------~~~ 79 (436)
+||||||+||||++||+++++++. |+||+.|++||++|++.++++|+++++|++ +.++|.++|+||++ +++
T Consensus 93 ~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~ 172 (548)
T 1q3q_A 93 AGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKE 172 (548)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHH
T ss_pred ECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchH
Confidence 799999999999999999999999 999999999999999999999999999987 47899999998764 367
Q ss_pred hHHHHHHHHHHhcccC--C-------ceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecc
Q 013822 80 EIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT 148 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~--~-------~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~ 148 (436)
.|++++++|+.+++++ | .|+|+ +|++.. ++++++|++||++|.||||+. .++||+|+++|+
T Consensus 173 ~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIll~~~ 244 (548)
T 1q3q_A 173 LLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVRGVVIDKEVVHPRMPK-------RVENAKIALINE 244 (548)
T ss_dssp HHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEESSEEESCCCSSTTSCS-------EESSEEEEEECS
T ss_pred HHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEeeEEEeccCCCCCCcc-------eecCCEEEEEec
Confidence 8999999999999865 3 68887 788876 589999999999999999853 689999999999
Q ss_pred c-------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCC
Q 013822 149 K-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 204 (436)
Q Consensus 149 ~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~ 204 (436)
+ |++++++ .+.++++.++|+|+||++++|+++|+++|+.|+ |+||+
T Consensus 245 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 314 (548)
T 1q3q_A 245 ALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR---- 314 (548)
T ss_dssp CBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC----
T ss_pred CcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc----
Confidence 8 6777775 788999999999999999999999999999874 78886
Q ss_pred ccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccc
Q 013822 205 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTS 281 (436)
Q Consensus 205 ~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s 281 (436)
+.|+++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|+++
T Consensus 315 -~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------- 369 (548)
T 1q3q_A 315 -RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP------------------- 369 (548)
T ss_dssp -SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC-------------------
T ss_pred -cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-------------------
Confidence 567899999999999999996 899999999999999764 8899999999875
Q ss_pred HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHH
Q 013822 282 DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGV 359 (436)
Q Consensus 282 ~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~ 359 (436)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+++
T Consensus 370 ------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i 437 (548)
T 1q3q_A 370 ------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAI 437 (548)
T ss_dssp ------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHH
Confidence 469999999999999999999999999999999999 9999999999999999998764 89999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013822 360 QIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNA 435 (436)
Q Consensus 360 ~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~ 435 (436)
++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+
T Consensus 438 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 517 (548)
T 1q3q_A 438 ENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILR 517 (548)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999863 346899999999999999999999999999999999999999999
Q ss_pred C
Q 013822 436 I 436 (436)
Q Consensus 436 i 436 (436)
|
T Consensus 518 i 518 (548)
T 1q3q_A 518 I 518 (548)
T ss_dssp C
T ss_pred H
Confidence 7
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-79 Score=646.77 Aligned_cols=381 Identities=18% Similarity=0.198 Sum_probs=338.5
Q ss_pred cccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCC----HHHHHHHHHHhcCC-----
Q 013822 8 YLFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITT----FEEIAQVGTTAANG----- 77 (436)
Q Consensus 8 ~~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~----~~~l~~vA~ts~~~----- 77 (436)
-+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++. +++|.++|+||+++
T Consensus 79 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~ 158 (515)
T 3iyg_E 79 EIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNS 158 (515)
T ss_pred hhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhH
Confidence 3799999999999999999999999 9999999999999999999999999998853 57899999999984
Q ss_pred -chhHHHHHHHHHHhcccC-------Cceeee--cCCCccceeEEeeeEEEecccccccccccccc-ceeeecCceEEE-
Q 013822 78 -DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNK-KECVLDGALVLI- 145 (436)
Q Consensus 78 -~~~~~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~-~~~~l~~p~Il~- 145 (436)
.+.|++++++|+.++... +.|.|+ .|++.. ++++++||+||++|.||||+++.+. +...+++|+.+.
T Consensus 159 ~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 159 CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEeeEEEecccccccccccCCCceEEEEcCcccccc
Confidence 346888999999888641 346665 477765 5999999999999999999986653 334556665554
Q ss_pred ----eccccCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhh
Q 013822 146 ----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKA 210 (436)
Q Consensus 146 ----~d~~i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~ 210 (436)
++.++++++++ .++++++.++|+|+||++++|+++|+++|+.|+ |.++++++ +.
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~~v~-----k~ 306 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVRWVG-----GP 306 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEeccC-----HH
Confidence 34457777765 678999999999999999999999999999885 66888763 67
Q ss_pred HHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHH
Q 013822 211 IMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLK 285 (436)
Q Consensus 211 ~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i-----~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~l~ 285 (436)
+|+|||++|||+++++ ++++++++||+|+.|++ ++++|+||+||+++.
T Consensus 307 ~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~---------------------- 359 (515)
T 3iyg_E 307 EIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSR---------------------- 359 (515)
T ss_pred HHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCc----------------------
Confidence 8999999999999996 89999999999999976 448899999998865
Q ss_pred HHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHHHH
Q 013822 286 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQ 363 (436)
Q Consensus 286 ~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~~a 363 (436)
.|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|+++|+
T Consensus 360 ---------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a 430 (515)
T 3iyg_E 360 ---------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFA 430 (515)
T ss_pred ---------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 48999999999999999999999999999999999 9999999999999999998765 899999999999
Q ss_pred HHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 364 NALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 364 ~AL~~ip~~La~NaG~d~~~i-~~l~~~----~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
+||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 431 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 431 DALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999 999862 4568999999999999999999999999999999999999999986
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.5e-80 Score=653.94 Aligned_cols=373 Identities=20% Similarity=0.263 Sum_probs=344.1
Q ss_pred cccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC-CHHHHHHHHHHhcC------Cch
Q 013822 8 YLFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT-TFEEIAQVGTTAAN------GDG 79 (436)
Q Consensus 8 ~~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~-~~~~l~~vA~ts~~------~~~ 79 (436)
-+||||||+||||++||+++++++. |+||+.|++||++|++.++++|+++++| + +.++|.++|+||++ +++
T Consensus 91 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~ 169 (545)
T 1a6d_A 91 AVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSND 169 (545)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHH
Confidence 3799999999999999999999999 9999999999999999999999999999 7 78899999998754 468
Q ss_pred hHHHHHHHHHHhcccC---------Cceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecc
Q 013822 80 EIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT 148 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~---------~~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~ 148 (436)
.|++++++|+.+++++ +.|+|+ +|++.. ++++++|++||++|.||||+. .++||+|+++|+
T Consensus 170 ~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIll~~~ 241 (545)
T 1a6d_A 170 FLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISGIVIDKEKVHSKMPD-------VVKNAKIALIDS 241 (545)
T ss_dssp HHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESEEEESCCCSCTTSCS-------EEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEeeEEEeccCCCCCCcc-------eecCCEEEEEec
Confidence 8999999999999865 378887 788876 589999999999999999853 689999999999
Q ss_pred c-------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCC
Q 013822 149 K-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 204 (436)
Q Consensus 149 ~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~ 204 (436)
+ |++++++ .+.++++.++|+|+||++++|+++||++|+.|+ |+||+
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 311 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR---- 311 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC----
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec----
Confidence 8 6666665 788999999999999999999999999999875 78886
Q ss_pred ccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccc
Q 013822 205 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTS 281 (436)
Q Consensus 205 ~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~---~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s 281 (436)
+.|+++|+|||++|||+++++ ++++++++||+|+.|++. +++|+||++|+++
T Consensus 312 -~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------- 366 (545)
T 1a6d_A 312 -RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------------------- 366 (545)
T ss_dssp -SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS-------------------
T ss_pred -cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-------------------
Confidence 567889999999999999996 899999999999999764 7899999999865
Q ss_pred HHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHH
Q 013822 282 DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGV 359 (436)
Q Consensus 282 ~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~ 359 (436)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+++
T Consensus 367 ------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i 434 (545)
T 1a6d_A 367 ------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAI 434 (545)
T ss_dssp ------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred ------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHH
Confidence 469999999999999999999999999999999999 9999999999999999999764 89999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013822 360 QIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNA 435 (436)
Q Consensus 360 ~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~ 435 (436)
++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+
T Consensus 435 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 514 (545)
T 1a6d_A 435 EAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILR 514 (545)
T ss_dssp HHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999863 446899999999999999999999999999999999999999999
Q ss_pred C
Q 013822 436 I 436 (436)
Q Consensus 436 i 436 (436)
|
T Consensus 515 i 515 (545)
T 1a6d_A 515 I 515 (545)
T ss_dssp C
T ss_pred H
Confidence 7
No 15
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.5e-80 Score=647.48 Aligned_cols=380 Identities=17% Similarity=0.188 Sum_probs=333.8
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCCc------h
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAANGD------G 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~~~------~ 79 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~ 160 (518)
T 3iyg_D 81 AGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSS 160 (518)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHH
Confidence 799999999999999999999999 999999999999999999999999999997 7789999999999864 7
Q ss_pred hHHHHHHHHHHhccc---CCc-----eeee--cCCCccceeEEeeeEEEeccccc--cccccccccc--eeeecCceEEE
Q 013822 80 EIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKGMKLEWGLKS--PYFFTHKNKK--ECVLDGALVLI 145 (436)
Q Consensus 80 ~~~~li~~a~~~vg~---~~~-----I~v~--~g~~~~d~~~~i~G~~~d~g~~~--p~~~~~~~~~--~~~l~~p~Il~ 145 (436)
.|++++++|+.+++. ++. |+|+ .|++. +++++++||+||++|.| |+++++++.. .+.+++|++.
T Consensus 161 ~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~- 238 (518)
T 3iyg_D 161 LLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD- 238 (518)
T ss_pred HHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh-hhheEeccEEEecccccCCCccccCceEEEEEeeccccccc-
Confidence 899999999999985 554 6776 35555 47999999999999998 5544333321 2233444433
Q ss_pred ecc--ccCCHH-----------HHHHHHHHHHHcCCCEEEE-----ecCcchhhHHHHHHhccCCCccEEEEEeCCCccc
Q 013822 146 YDT--KISNSN-----------VIRQASLPCMMQGQSLLVV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAED 207 (436)
Q Consensus 146 ~d~--~i~~~~-----------~i~~~le~i~~~~~~lvii-----~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~ 207 (436)
++. ++++++ ++.++++++.++|+|+||+ +++|+++++++|+.| +|+|||+|++
T Consensus 239 ~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~--- 309 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDIER--- 309 (518)
T ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEecCCH---
Confidence 232 245554 4678899999999999999 799999999999976 4899999964
Q ss_pred hhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHH
Q 013822 208 RKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDK 283 (436)
Q Consensus 208 r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i---~~-~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~ 283 (436)
.+|+|||++|||+++++ ++++++++||+|+.|++ ++ ++++||++|++.
T Consensus 310 --~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~--------------------- 361 (518)
T 3iyg_D 310 --EDIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCASP--------------------- 361 (518)
T ss_pred --HHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCC---------------------
Confidence 45999999999999997 89999999999999974 45 678999998751
Q ss_pred HHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHH
Q 013822 284 LKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQI 361 (436)
Q Consensus 284 l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~ 361 (436)
+++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|+++
T Consensus 362 ---------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~ 432 (518)
T 3iyg_D 362 ---------GKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRA 432 (518)
T ss_pred ---------CceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHH
Confidence 3679999999999999999999999999999999998 9999999999999999998764 8999999999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 362 VQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 362 ~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
|++||+.||++||+|||+||.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 433 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 433 FADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999 999872 5568999999999999999999999999999999999999999997
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.9e-80 Score=649.18 Aligned_cols=378 Identities=16% Similarity=0.189 Sum_probs=340.6
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHh-hcccCC--CHHHHHHHHHHhcC------Cc
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QARKIT--TFEEIAQVGTTAAN------GD 78 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~-~s~~i~--~~~~l~~vA~ts~~------~~ 78 (436)
+||||||+||||++||++|+++++ |+||+.|++||++|++.++++|++ +++|++ +++.|.++|+||++ ++
T Consensus 80 ~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~ 159 (529)
T 3iyg_A 80 VGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGING 159 (529)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccH
Confidence 799999999999999999999999 999999999999999999999999 999987 67899999999975 36
Q ss_pred hhHHHHHHHHHHhcc---cCC-----c--eeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEe
Q 013822 79 GEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIY 146 (436)
Q Consensus 79 ~~~~~li~~a~~~vg---~~~-----~--I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~ 146 (436)
+.|++++++|+.+++ .+| . |+|+ .|++.. ++++++||+||++|.||+|++ .++||+|+++
T Consensus 160 ~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIlll 231 (529)
T 3iyg_A 160 DFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQM-ESMLINGYALNCVVGSQGMPK-------RIVNAKIACL 231 (529)
T ss_pred HHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCcc-ceEEEeeeEEecCcccccCCc-------ccCCceEEEe
Confidence 889999999999997 333 2 6665 466654 699999999999999999864 6889999999
Q ss_pred cccc-------------CCHH-----------HHHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeC
Q 013822 147 DTKI-------------SNSN-----------VIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAA 202 (436)
Q Consensus 147 d~~i-------------~~~~-----------~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~ 202 (436)
|+++ ++++ .+.++++++.++|+|+||++++|+++++++|+.|+ |++||+
T Consensus 232 ~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~~- 304 (529)
T 3iyg_A 232 DFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVRR- 304 (529)
T ss_pred cCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceecc-
Confidence 9854 2332 26678899999999999999999999999999874 789884
Q ss_pred CCccchhhHHHHHHHHhCCeEeeCCCCCC-cCCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhh
Q 013822 203 GLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKL 278 (436)
Q Consensus 203 ~~~~~r~~~le~la~~tG~~~~s~~~~~~-~~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~ 278 (436)
.++++|+|||++|||+++++..++. .+++++++||+|+.|+ +++++|+||+||+++.
T Consensus 305 ----v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~--------------- 365 (529)
T 3iyg_A 305 ----VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKART--------------- 365 (529)
T ss_pred ----CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCc---------------
Confidence 5678999999999999999865554 3557789999999997 8899999999998764
Q ss_pred cccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHH
Q 013822 279 STSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQK 356 (436)
Q Consensus 279 ~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~ 356 (436)
+|||+|||+|+++++|.||++|||||++|+++++| +|||||++|+++|++|++++.. ++++|
T Consensus 366 ----------------~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq 429 (529)
T 3iyg_A 366 ----------------SASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQ 429 (529)
T ss_pred ----------------eEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHH
Confidence 59999999999999999999999999999999998 9999999999999999999865 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC--------CCeeEeCCCCccccccccCcccccccHHHHHH
Q 013822 357 IGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS--------SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFA 424 (436)
Q Consensus 357 ~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~--------~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~ 424 (436)
+++++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.+|++.||++.|||||+.||+++|+
T Consensus 430 ~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~ 509 (529)
T 3iyg_A 430 LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLK 509 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHH
Confidence 9999999999999999999999999999 999863 22 57999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC
Q 013822 425 KATSMISLKNAI 436 (436)
Q Consensus 425 ~A~~~a~~iL~i 436 (436)
+|+++|++||||
T Consensus 510 ~A~e~a~~iL~i 521 (529)
T 3iyg_A 510 FATEAAITILRI 521 (529)
T ss_pred HHHHHHHHHHhH
Confidence 999999999997
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=8e-81 Score=656.61 Aligned_cols=377 Identities=16% Similarity=0.151 Sum_probs=341.6
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------ch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~~------~~ 79 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +.+.|.++|+||+++ ++
T Consensus 89 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~ 168 (528)
T 3p9d_D 89 AGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSS 168 (528)
T ss_dssp TCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHH
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHH
Confidence 799999999999999999999999 999999999999999999999999999997 788999999999975 67
Q ss_pred hHHHHHHHHHHhccc--CCceeeec-------CCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecccc
Q 013822 80 EIGELIAKVFEKGWE--NDLITIFD-------RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI 150 (436)
Q Consensus 80 ~~~~li~~a~~~vg~--~~~I~v~~-------g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i 150 (436)
.|++++++|+.+++. ++.|+++. |++.. ++++++||+||++|.|||| |+..++||+|++++++|
T Consensus 169 ~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~l 241 (528)
T 3p9d_D 169 FLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQI 241 (528)
T ss_dssp HHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCS
T ss_pred HHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeeeEEeecccCccc------CcccccCceEEEEeccc
Confidence 899999999999986 45554432 77775 5899999999999999995 34589999999999986
Q ss_pred C-------------CHH-----------HHHHHHHHHHHcCCCEEEEecCc-----chhhHHHHHHhccCCCccEEEEEe
Q 013822 151 S-------------NSN-----------VIRQASLPCMMQGQSLLVVAEDV-----ENEVLGDIATDFTCTTEKVCIIKA 201 (436)
Q Consensus 151 ~-------------~~~-----------~i~~~le~i~~~~~~lvii~~~i-----~~~al~~l~~n~~~~~~~i~avk~ 201 (436)
+ +++ .+.++++++.+.|+|+||++++| +++++++|..|+ |++||+
T Consensus 242 e~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~~ 315 (528)
T 3p9d_D 242 SPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVKD 315 (528)
T ss_dssp SCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEEC
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEEe
Confidence 5 443 37889999999999999999999 999999998664 789985
Q ss_pred CCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhh
Q 013822 202 AGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKL 278 (436)
Q Consensus 202 ~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~ 278 (436)
+ ++++|+|||++|||+++++ ++++++++||+|+.|+ ++++++++|.+|++..
T Consensus 316 ~-----~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~--------------- 370 (528)
T 3p9d_D 316 I-----EREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN--------------- 370 (528)
T ss_dssp C-----CTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCGG---------------
T ss_pred C-----CHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEcccccC---------------
Confidence 4 5678999999999999997 7889999999999986 4577889999986321
Q ss_pred cccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHH
Q 013822 279 STSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQK 356 (436)
Q Consensus 279 ~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~ 356 (436)
.+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.. ++++|
T Consensus 371 -------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 437 (528)
T 3p9d_D 371 -------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQA 437 (528)
T ss_dssp -------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHH
T ss_pred -------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHH
Confidence 14689999999999999999999999999999999998 9999999999999999998765 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHH
Q 013822 357 IGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 432 (436)
Q Consensus 357 ~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~ 432 (436)
+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+++|++
T Consensus 438 ~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~ 517 (528)
T 3p9d_D 438 FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKS 517 (528)
T ss_dssp TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999874 457899999999999999999999999999999999999999
Q ss_pred HhcC
Q 013822 433 KNAI 436 (436)
Q Consensus 433 iL~i 436 (436)
||+|
T Consensus 518 iL~i 521 (528)
T 3p9d_D 518 ILRI 521 (528)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 9987
No 18
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=7.8e-80 Score=651.48 Aligned_cols=374 Identities=20% Similarity=0.278 Sum_probs=343.8
Q ss_pred cccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCC--HHHHHHHHHHhcC------Cc
Q 013822 8 YLFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITT--FEEIAQVGTTAAN------GD 78 (436)
Q Consensus 8 ~~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~--~~~l~~vA~ts~~------~~ 78 (436)
-+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++. .++|.++|+||++ ++
T Consensus 90 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~ 169 (543)
T 1a6d_B 90 FVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAK 169 (543)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccH
Confidence 3799999999999999999999999 9999999999999999999999999999874 6789999997754 46
Q ss_pred hhHHHHHHHHHHhcccC--C-------ceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEec
Q 013822 79 GEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYD 147 (436)
Q Consensus 79 ~~~~~li~~a~~~vg~~--~-------~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d 147 (436)
+.|++++++|+.+++++ | .|+|+ +|++.. ++++++||+||++|.||||+. .++||+|+++|
T Consensus 170 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIll~~ 241 (543)
T 1a6d_B 170 DKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLINGIIVDKEKVHPGMPD-------VVKDAKIALLD 241 (543)
T ss_dssp HHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEESEEEESCCCSSTTSCS-------EEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEccEEEecCCCCCCCcc-------eecCCeEEEEe
Confidence 78999999999999876 5 38887 788876 589999999999999999852 68999999999
Q ss_pred cc-------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCC
Q 013822 148 TK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAG 203 (436)
Q Consensus 148 ~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~ 203 (436)
++ |++++++ .++++++.++|+|+||++++|+++|+++|+.|+ |+||+
T Consensus 242 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~--- 312 (543)
T 1a6d_B 242 APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR--- 312 (543)
T ss_dssp SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC---
T ss_pred cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec---
Confidence 98 6666665 788999999999999999999999999999874 78886
Q ss_pred CccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcc
Q 013822 204 LAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLST 280 (436)
Q Consensus 204 ~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i---~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~ 280 (436)
+.|+++|+|||++|||+++++ ++++++++||+|+.|++ ++++|+||+||+++
T Consensus 313 --~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 367 (543)
T 1a6d_B 313 --RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP------------------ 367 (543)
T ss_dssp --SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS------------------
T ss_pred --cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC------------------
Confidence 467889999999999999986 89999999999999975 48899999999875
Q ss_pred cHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcC-CChhHHHH
Q 013822 281 SDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQT-TNSDQKIG 358 (436)
Q Consensus 281 s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~-~~~~~~~g 358 (436)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++.+|++++. .++++|++
T Consensus 368 -------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~ 434 (543)
T 1a6d_B 368 -------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLA 434 (543)
T ss_dssp -------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHH
T ss_pred -------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHH
Confidence 469999999999999999999999999999999999 999999999999999999876 48899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHh
Q 013822 359 VQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKN 434 (436)
Q Consensus 359 ~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL 434 (436)
+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 435 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL 514 (543)
T 1a6d_B 435 IEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMIL 514 (543)
T ss_dssp HHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999863 45689999999999999999999999999999999999999999
Q ss_pred cC
Q 013822 435 AI 436 (436)
Q Consensus 435 ~i 436 (436)
+|
T Consensus 515 ~i 516 (543)
T 1a6d_B 515 RI 516 (543)
T ss_dssp HE
T ss_pred HH
Confidence 86
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.8e-79 Score=639.66 Aligned_cols=379 Identities=16% Similarity=0.201 Sum_probs=336.1
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhh----cccCCCHHHHHHHHHHhcCC-----c
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQ----ARKITTFEEIAQVGTTAANG-----D 78 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~----s~~i~~~~~l~~vA~ts~~~-----~ 78 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++ +.++.++++|.++|+||+++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~ 160 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNE 160 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccch
Confidence 799999999999999999999999 9999999999999999999999998 56777889999999999986 6
Q ss_pred hhHHHHHHHHHHhcccC-Cceeee-------cCCCccceeEEeeeEEEeccccccccccccccce-eeecCce-EEEecc
Q 013822 79 GEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKE-CVLDGAL-VLIYDT 148 (436)
Q Consensus 79 ~~~~~li~~a~~~vg~~-~~I~v~-------~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~-~~l~~p~-Il~~d~ 148 (436)
+.||+++++|+.+++++ +.|+++ .|++. +++++++||+||++|.| |+++.+..+ ..+++|+ +..++.
T Consensus 161 ~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~ 237 (512)
T 3iyg_Q 161 VFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITET 237 (512)
T ss_pred HHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccc
Confidence 78999999999999876 455543 37676 57999999999999987 666554222 3456665 666666
Q ss_pred c----cCCHHHHHHH-------HH----HHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHH
Q 013822 149 K----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIME 213 (436)
Q Consensus 149 ~----i~~~~~i~~~-------le----~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le 213 (436)
+ |++++++.++ ++ ++.++|+|+||++++|++.++++|.. .+|+|||+|++ .+|+
T Consensus 238 k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k------~~I~av~~~~~-----~dle 306 (512)
T 3iyg_Q 238 KGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK------YNIMLVRLNSK-----WDLR 306 (512)
T ss_pred cceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH------CCeEEEEeCCH-----HHHH
Confidence 6 7888888776 55 78899999999999999999987764 36999999874 3499
Q ss_pred HHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhh
Q 013822 214 DLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAK 290 (436)
Q Consensus 214 ~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i---~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~ 290 (436)
|||++|||+++++ ++++++++||+|+.|++ +++++++|++|+.
T Consensus 307 ~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~----------------------------- 352 (512)
T 3iyg_Q 307 RLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE----------------------------- 352 (512)
T ss_pred HHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEEEcccC-----------------------------
Confidence 9999999999996 89999999999999975 4668999998853
Q ss_pred hcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHH
Q 013822 291 LSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKM 368 (436)
Q Consensus 291 l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~~~a~AL~~ 368 (436)
+|++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|+++|++||+.
T Consensus 353 -~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ 431 (512)
T 3iyg_Q 353 -DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEA 431 (512)
T ss_pred -CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 25789999999999999999999999999999999999 9999999999999999999764 89999999999999999
Q ss_pred HHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC--ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 369 AAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG--NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 369 ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g--~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
||++||+|||+||.++ .+|++. +++++|||+.+| ++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 432 ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 432 IPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRV 505 (512)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999 999873 567899999965 9999999999999999999999999999999986
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.5e-79 Score=645.96 Aligned_cols=379 Identities=19% Similarity=0.212 Sum_probs=333.9
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCCH------HHHHHHHHHhcCC----
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTF------EEIAQVGTTAANG---- 77 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~~------~~l~~vA~ts~~~---- 77 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|+++. +.|.++|+||+++
T Consensus 115 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~ 194 (562)
T 3p9d_E 115 IGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVS 194 (562)
T ss_dssp TSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTT
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhH
Confidence 799999999999999999999999 99999999999999999999999999998632 6899999999974
Q ss_pred --chhHHHHHHHHHHhcccC-------Cceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEe
Q 013822 78 --DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIY 146 (436)
Q Consensus 78 --~~~~~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~ 146 (436)
.+.|++++++|+.++... +.|.|+ .|++.. ++++++||+||++|.||||+++.+ .+..++||+|+++
T Consensus 195 ~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall 272 (562)
T 3p9d_E 195 KDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAIL 272 (562)
T ss_dssp TTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEEESSEEESSCCCTTSCCC------TTCSSCEECEE
T ss_pred HHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhceeeeEEEecCCCCCCcCcccc-cccccccceEEEe
Confidence 357899999999988652 346665 477776 589999999999999999988651 0112245555555
Q ss_pred cc-------------ccCCHHH-----------HHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeC
Q 013822 147 DT-------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAA 202 (436)
Q Consensus 147 d~-------------~i~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~ 202 (436)
++ +|+++++ +.++++++.++|+|+||++++|+++++++|+.|+ |.+|+++
T Consensus 273 ~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~------I~~v~~v 346 (562)
T 3p9d_E 273 TCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND------LPAVRWV 346 (562)
T ss_dssp ESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT------CCCEECC
T ss_pred cccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC------CEEEecc
Confidence 43 3556655 6789999999999999999999999999999886 4578876
Q ss_pred CCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHhh
Q 013822 203 GLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDNVVIIGGSGELVDIQERCEQLRSTIK 277 (436)
Q Consensus 203 ~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i-----~~~~~~~~~~~~~~~~i~~r~~~l~~~l~ 277 (436)
++++|+|||++|||+++++ ++++++++||+|+.|++ ++++|+||++|+++.
T Consensus 347 -----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~-------------- 402 (562)
T 3p9d_E 347 -----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETK-------------- 402 (562)
T ss_dssp -----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCS--------------
T ss_pred -----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCC--------------
Confidence 3567999999999999996 89999999999999987 358899999998764
Q ss_pred hcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhH
Q 013822 278 LSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQ 355 (436)
Q Consensus 278 ~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~ 355 (436)
.|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++
T Consensus 403 -----------------~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 465 (562)
T 3p9d_E 403 -----------------TVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGID 465 (562)
T ss_dssp -----------------CCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTH
T ss_pred -----------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHH
Confidence 48999999999999999999999999999999999 9999999999999999998764 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHH
Q 013822 356 KIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMI 430 (436)
Q Consensus 356 ~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~----~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a 430 (436)
|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|
T Consensus 466 q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a 545 (562)
T 3p9d_E 466 QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLC 545 (562)
T ss_dssp HHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999862 4578999999999999999999999999999999999999
Q ss_pred HHHhcC
Q 013822 431 SLKNAI 436 (436)
Q Consensus 431 ~~iL~i 436 (436)
++||+|
T Consensus 546 ~~iL~i 551 (562)
T 3p9d_E 546 RMILKI 551 (562)
T ss_dssp HHHHTE
T ss_pred HHHHHH
Confidence 999986
No 21
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.7e-78 Score=637.50 Aligned_cols=372 Identities=18% Similarity=0.247 Sum_probs=325.9
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC-CHHHHHHHHHHhcCC------chh
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT-TFEEIAQVGTTAANG------DGE 80 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~-~~~~l~~vA~ts~~~------~~~ 80 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 699999999999999999999999 999999999999999999999999999988 778999999999874 346
Q ss_pred HHHHHHHHHHhcccCC------ceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccccC-
Q 013822 81 IGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS- 151 (436)
Q Consensus 81 ~~~li~~a~~~vg~~~------~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~- 151 (436)
|++++++|+.++...+ .|.|. .|+.. +++++++||+||++|.||||+ .+++||+|+++|++|+
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~dk~~~~p~m~-------~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVLDHGARHPDMK-------KRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEEeccCCCCCcc-------ccccCCeEEEecccccc
Confidence 7777788887775421 23443 45554 579999999999999999864 4799999999998753
Q ss_pred ------------CHHHHH-----------HHHHHHHH--------cCCCEEEEe-cCcchhhHHHHHHhccCCCccEEEE
Q 013822 152 ------------NSNVIR-----------QASLPCMM--------QGQSLLVVA-EDVENEVLGDIATDFTCTTEKVCII 199 (436)
Q Consensus 152 ------------~~~~i~-----------~~le~i~~--------~~~~lvii~-~~i~~~al~~l~~n~~~~~~~i~av 199 (436)
+++++. ..++.+.. .++|+||++ ++|++.++++|..+ +|++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEE
Confidence 333322 23333332 467877775 89999999999875 47898
Q ss_pred EeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCC-ceeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHH
Q 013822 200 KAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRST 275 (436)
Q Consensus 200 k~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~-LG~a~~v---~i~~~~~~~~~~~~~~~~i~~r~~~l~~~ 275 (436)
+++ ++++|+|||++|||+++++ ++++++++ ||+|+ | ++++++|+||++|++++.
T Consensus 306 ~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~----------- 363 (517)
T 3iyg_Z 306 RRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRS----------- 363 (517)
T ss_pred Eec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchh-----------
Confidence 864 4678999999999999996 89999999 99999 9 578999999999988754
Q ss_pred hhhcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-Ch
Q 013822 276 IKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NS 353 (436)
Q Consensus 276 l~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~ 353 (436)
|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++++|++++.. ++
T Consensus 364 --------------------~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g 423 (517)
T 3iyg_Z 364 --------------------VTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKG 423 (517)
T ss_pred --------------------heeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCH
Confidence 8999999999999999999999999999999999 9999999999999999999875 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHH
Q 013822 354 DQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSM 429 (436)
Q Consensus 354 ~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~ 429 (436)
++|+|+++|++||+.+|++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 424 ~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 503 (517)
T 3iyg_Z 424 RAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVI 503 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999873 457899999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 013822 430 ISLKNAI 436 (436)
Q Consensus 430 a~~iL~i 436 (436)
|++||+|
T Consensus 504 a~~iL~i 510 (517)
T 3iyg_Z 504 ATNILLV 510 (517)
T ss_pred HHHHHHH
Confidence 9999986
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.5e-80 Score=650.32 Aligned_cols=372 Identities=20% Similarity=0.230 Sum_probs=337.9
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHHHHHHHHHhhcccCCC-----HHHHHHHHHHhcCC----
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVRNLDCQARKITT-----FEEIAQVGTTAANG---- 77 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~--G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~-----~~~l~~vA~ts~~~---- 77 (436)
+||||||++|||++||++|++++. |+||+.|++||++|++.++++|+++++|+++ +++|.+||+||+++
T Consensus 88 ~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~ 167 (527)
T 3p9d_B 88 VGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILS 167 (527)
T ss_dssp TCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGG
T ss_pred hCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCccc
Confidence 799999999999999999999997 9999999999999999999999999999985 67899999999986
Q ss_pred --chhHHHHHHHHHHhcccCC---ceeeec--CCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccc-
Q 013822 78 --DGEIGELIAKVFEKGWEND---LITIFD--RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK- 149 (436)
Q Consensus 78 --~~~~~~li~~a~~~vg~~~---~I~v~~--g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~- 149 (436)
++.||+++++|+.+++.++ .|+|++ |++.. ++++++||+||++|.||| |+ .++||+|++++++
T Consensus 168 ~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~-ds~lv~G~~~dk~~~~~~----p~----~~~n~kIlll~~~l 238 (527)
T 3p9d_B 168 QDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLS-DSFLDEGFILAKKFGNNQ----PK----RIENAKILIANTTL 238 (527)
T ss_dssp GGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSS-CCCEESSCCCSCCCSSSC----CS----CCSSCEEEEECSCS
T ss_pred chHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcc-ccEEEEeEEEecccCCCC----Ce----eeecceEEEecccc
Confidence 6789999999999999887 788874 65554 699999999999999997 22 4689999998764
Q ss_pred -------------cCCHHHH-----------HHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCc
Q 013822 150 -------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLA 205 (436)
Q Consensus 150 -------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~ 205 (436)
+++++++ .+.++++.++|+|+||++++|++.++++|..|+ |++|++|++
T Consensus 239 e~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~~~- 311 (527)
T 3p9d_B 239 DTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHADF- 311 (527)
T ss_dssp SCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCCHH-
T ss_pred ccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecCCH-
Confidence 3444444 678888999999999999999999999999874 789998753
Q ss_pred cchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccH
Q 013822 206 EDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD 282 (436)
Q Consensus 206 ~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~ 282 (436)
.+|+|||++|||+++++ ++++++++||+|+.|+ ++++++++|.||+++
T Consensus 312 ----~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------------- 362 (527)
T 3p9d_B 312 ----EGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAG-------------------- 362 (527)
T ss_dssp ----HHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCS--------------------
T ss_pred ----HHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCCCC--------------------
Confidence 45999999999999997 8899999999999987 678999999999764
Q ss_pred HHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHH
Q 013822 283 KLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQ 360 (436)
Q Consensus 283 ~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~ 360 (436)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|++
T Consensus 363 -----------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~ 431 (527)
T 3p9d_B 363 -----------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVE 431 (527)
T ss_dssp -----------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHH
T ss_pred -----------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 579999999999999999999999999999999999 9999999999999999998764 899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 361 IVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 361 ~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
+|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 432 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 432 AFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999 999873 4578999999999999999999999999999999999999999986
No 23
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-77 Score=631.58 Aligned_cols=373 Identities=13% Similarity=0.162 Sum_probs=332.8
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC--CHHHHHHHHHHhcCC------ch
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--TFEEIAQVGTTAANG------DG 79 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~--~~~~l~~vA~ts~~~------~~ 79 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ ..
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 799999999999999999999999 999999999999999999999999999987 367899999999873 23
Q ss_pred hHHHHHHHHHHhcccC--C--------ceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEec
Q 013822 80 EIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYD 147 (436)
Q Consensus 80 ~~~~li~~a~~~vg~~--~--------~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d 147 (436)
.+++++++|+..+..+ + .|.|+ +|++.. ++++++||+||++|.||+|+ ..++||+|+++|
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~-ds~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~ 230 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIE-DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLD 230 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcc-cceEEeeEEEeCCCCCCCCc-------ceeeeeEEEEEc
Confidence 4667889999888622 2 15554 577765 69999999999999999764 479999999999
Q ss_pred c-------------ccCCHHHHHHHHH-----------HHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCC
Q 013822 148 T-------------KISNSNVIRQASL-----------PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAG 203 (436)
Q Consensus 148 ~-------------~i~~~~~i~~~le-----------~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~ 203 (436)
+ +|++++++.++++ ++.+.|.+++|+.++|++.++++|..+ +|+|++
T Consensus 231 ~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av~--- 301 (515)
T 3iyg_G 231 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAIR--- 301 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceeec---
Confidence 8 5778888888777 788888777777789999999988854 477874
Q ss_pred CccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-eeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhc
Q 013822 204 LAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLS 279 (436)
Q Consensus 204 ~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~-a~~v~i---~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~ 279 (436)
+.++++|||||++|||+++++ ++++++++||+ |+.|++ ++++|+||+||+++.
T Consensus 302 --~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~---------------- 358 (515)
T 3iyg_G 302 --RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPK---------------- 358 (515)
T ss_pred --cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEEEEECCceEEEEeCCCCCC----------------
Confidence 567889999999999999997 89999999999 999974 456899999998874
Q ss_pred ccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHc-CCCCCchHHHHHHHHHHHHhcCC-ChhHHH
Q 013822 280 TSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKI 357 (436)
Q Consensus 280 ~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~-gvV~GGGa~e~~~s~~L~~~~~~-~~~~~~ 357 (436)
.|||+|||+|+++++|+||++|||||++|+++++ ++|||||++|++++++|++++.. ++++|+
T Consensus 359 ---------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~ 423 (515)
T 3iyg_G 359 ---------------ACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQW 423 (515)
T ss_pred ---------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHH
Confidence 4999999999999999999999999999999965 69999999999999999998764 899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHH
Q 013822 358 GVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 432 (436)
Q Consensus 358 g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~----~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~ 432 (436)
|+++|++||+.||++||+|||+||.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~ 503 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVL 503 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 999863 245799999999999999999999999999999999999999
Q ss_pred HhcC
Q 013822 433 KNAI 436 (436)
Q Consensus 433 iL~i 436 (436)
||+|
T Consensus 504 iL~i 507 (515)
T 3iyg_G 504 LLRI 507 (515)
T ss_pred HHHH
Confidence 9986
No 24
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.3e-79 Score=649.80 Aligned_cols=375 Identities=17% Similarity=0.167 Sum_probs=335.8
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCCC-----HHHHHHHHHHhcC------
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITT-----FEEIAQVGTTAAN------ 76 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~~-----~~~l~~vA~ts~~------ 76 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++++|++. .+.|.++|+||++
T Consensus 94 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~ 173 (550)
T 3p9d_G 94 VGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHN 173 (550)
T ss_dssp TSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGG
T ss_pred hCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccc
Confidence 799999999999999999999999 9999999999999999999999999999863 5679999999864
Q ss_pred CchhHHHHHHHHHHhccc-C------CceeeecCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEeccc
Q 013822 77 GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK 149 (436)
Q Consensus 77 ~~~~~~~li~~a~~~vg~-~------~~I~v~~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~ 149 (436)
+++.|++++++|+.++++ + +.+++ +|++..| +++++||+||++|.||||.+.|+ .++||+|+++|++
T Consensus 174 ~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~d-s~lv~G~~~dk~~~s~yf~~~~~----~~en~kIll~~~~ 247 (550)
T 3p9d_G 174 NADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEE-SLFINGVAFKKTFSYAGFEQQPK----KFNNPKILSLNVE 247 (550)
T ss_dssp GHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGG-CCCCSSEEECCCSSCTTCSCSCS----CCSSCCEEEECSC
T ss_pred cHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccc-eeEEeeEEEeccccccccccCcc----cccCceEEEeccc
Confidence 367899999999999984 3 34444 4777765 69999999999999999987666 4999999999997
Q ss_pred -------------cCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCc
Q 013822 150 -------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLA 205 (436)
Q Consensus 150 -------------i~~~~~i~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~ 205 (436)
|++++++.+ .++++.++|+++|+++++|++.++++|..+ +|+++++
T Consensus 248 Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v~~---- 317 (550)
T 3p9d_G 248 LELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCAGR---- 317 (550)
T ss_dssp CSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEEEC----
T ss_pred cccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccccC----
Confidence 455655544 677888999999999999999998866633 4778764
Q ss_pred cchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccH
Q 013822 206 EDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD 282 (436)
Q Consensus 206 ~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i---~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~ 282 (436)
.++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||+++
T Consensus 318 -v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~-------------------- 371 (550)
T 3p9d_G 318 -VSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA-------------------- 371 (550)
T ss_dssp -CCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC--------------------
T ss_pred -cCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC--------------------
Confidence 56788999999999999996 89999999999999975 68899999999865
Q ss_pred HHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHHhcCC-ChhHHHHHH
Q 013822 283 KLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQ 360 (436)
Q Consensus 283 ~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~~~~~-~~~~~~g~~ 360 (436)
++|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++++.. ++++|+|++
T Consensus 372 -----------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~ 440 (550)
T 3p9d_G 372 -----------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIIN 440 (550)
T ss_dssp -----------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHH
T ss_pred -----------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHH
Confidence 469999999999999999999999999999999998 9999999999999999998754 899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 013822 361 IVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 361 ~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~---~~~~~G~d~~~g~~~d~~~~gI~Dp~~v~~~al~~A~~~a~~iL~i 436 (436)
+|++||+.||++||+|||+|+.++ ++|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 441 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 441 AFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSV 520 (550)
T ss_dssp HHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999 999873 4678999999999999999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.3e-77 Score=634.96 Aligned_cols=373 Identities=17% Similarity=0.237 Sum_probs=323.7
Q ss_pred ccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccCC----CHHHHHHHHHHhcCC------
Q 013822 9 LFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT----TFEEIAQVGTTAANG------ 77 (436)
Q Consensus 9 ~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i~----~~~~l~~vA~ts~~~------ 77 (436)
+||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++++|++ +++.|.+||+||+++
T Consensus 87 ~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~ 166 (546)
T 3p9d_F 87 TGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADL 166 (546)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHH
T ss_pred hCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhH
Confidence 799999999999999999999999 999999999999999999999999999984 668899999999984
Q ss_pred chhHHHHHHHHHHhcccC-------Cceeee--cCCCccceeEEeeeEEEeccccccccccccccceeeecCceEEEecc
Q 013822 78 DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT 148 (436)
Q Consensus 78 ~~~~~~li~~a~~~vg~~-------~~I~v~--~g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~ 148 (436)
.+.|++++++|+.++.+. ..|.+. +|+.. +++++++||+||++|.||+|+ .+++||+|+++|+
T Consensus 167 ~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~-~ds~lv~G~v~dk~~~~~~m~-------~~~en~kIll~~~ 238 (546)
T 3p9d_F 167 TEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP-KDTTFIKGLVLDHGGRHPDMP-------TRVKNAYVLILNV 238 (546)
T ss_dssp CSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT-TTCCCCSSCEESCCCCSSSSC-------SSBCSCCCCEECC
T ss_pred HHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc-cccEEEeeEEEecccccccCc-------ceecCceEEEecC
Confidence 457899999999888531 135554 35555 469999999999999999764 4799999999997
Q ss_pred ccC-------------CHHH-----------HHHHHHHHHH---------cCCCEEEEe-cCcchhhHHHHHHhccCCCc
Q 013822 149 KIS-------------NSNV-----------IRQASLPCMM---------QGQSLLVVA-EDVENEVLGDIATDFTCTTE 194 (436)
Q Consensus 149 ~i~-------------~~~~-----------i~~~le~i~~---------~~~~lvii~-~~i~~~al~~l~~n~~~~~~ 194 (436)
+++ ++++ +...++.+.. +|+|+||++ ++|+++|+++|+.|+
T Consensus 239 ~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g----- 313 (546)
T 3p9d_F 239 SLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN----- 313 (546)
T ss_dssp CSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT-----
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC-----
Confidence 653 2211 2233444443 567866665 599999999999875
Q ss_pred cEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEE---EEecceEEEEcCCCChhhHHHHHHH
Q 013822 195 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV---IATMDNVVIIGGSGELVDIQERCEQ 271 (436)
Q Consensus 195 ~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v---~i~~~~~~~~~~~~~~~~i~~r~~~ 271 (436)
|+++|++ ++++|+|||++|||+++++ ++++++++||+|+.| .+++++|+||+||++++
T Consensus 314 -I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~-------- 374 (546)
T 3p9d_F 314 -ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPK-------- 374 (546)
T ss_dssp -CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCS--------
T ss_pred -CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHCCcccEEEEEEecCceEEEEecCCCCc--------
Confidence 6888864 4568999999999999996 899999999999999 57899999999999875
Q ss_pred HHHHhhhcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHHcC-CCCCchHHHHHHHHHHHH---
Q 013822 272 LRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK--- 347 (436)
Q Consensus 272 l~~~l~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~~g-vV~GGGa~e~~~s~~L~~--- 347 (436)
.|||+|||+|+++++|+||+++||||++|+++++| +|||||++|++++++|++
T Consensus 375 -----------------------~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 431 (546)
T 3p9d_F 375 -----------------------SCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANM 431 (546)
T ss_dssp -----------------------CEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHT
T ss_pred -----------------------eEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhh
Confidence 49999999999999999999999999999999998 999999999999999998
Q ss_pred hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc--------CCCCeeEeCCCCccccccccCcccccc
Q 013822 348 LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ--------DSSDLGYNPARGNYVDMFKCGDVDPLK 417 (436)
Q Consensus 348 ~~~~-~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~--------~~~~~G~d~~~g~~~d~~~~gI~Dp~~ 417 (436)
++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.
T Consensus 432 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 511 (546)
T 3p9d_F 432 NKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYR 511 (546)
T ss_dssp TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHH
T ss_pred hhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHH
Confidence 4654 899999999999999999999999999999999 999863 456899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 013822 418 HVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 418 v~~~al~~A~~~a~~iL~i 436 (436)
||+++|++|+++|++||+|
T Consensus 512 vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 512 VLRNAITGATGIASNLLLC 530 (546)
T ss_dssp HHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.4e-76 Score=628.70 Aligned_cols=374 Identities=16% Similarity=0.157 Sum_probs=331.5
Q ss_pred cccCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHHhhcccC----CCHHHHHHHHHHhcC-----C
Q 013822 8 YLFAGTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKI----TTFEEIAQVGTTAAN-----G 77 (436)
Q Consensus 8 ~~GDGTTt~vvLa~~ll~~~~~li~-G~~p~~I~~G~~~a~~~~~~~L~~~s~~i----~~~~~l~~vA~ts~~-----~ 77 (436)
-+||||||++|||++||++|++++. |+||+.|++||++|++.++++|++++.++ .+.+.|.++|+||++ +
T Consensus 95 e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~ 174 (568)
T 3p9d_H 95 DMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGS 174 (568)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTC
T ss_pred eeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcch
Confidence 3799999999999999999999999 99999999999999999999999999876 567889999999874 3
Q ss_pred chhHHHHHHHHHHhcccC-----C-------ceeeec--CCCccceeEEeeeEEEeccccccccccccccceeeec---C
Q 013822 78 DGEIGELIAKVFEKGWEN-----D-------LITIFD--RKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLD---G 140 (436)
Q Consensus 78 ~~~~~~li~~a~~~vg~~-----~-------~I~v~~--g~~~~d~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~---~ 140 (436)
++.|++++++|+.+++++ + .|+|+. |++.. ++++++|++|+++|. +| ...++ |
T Consensus 175 ~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS~lv~G~v~dk~~~--~m-------~~~i~~~~n 244 (568)
T 3p9d_H 175 EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NSTVIKGMVFNREPE--GH-------VKSLSEDKK 244 (568)
T ss_dssp HHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GCEEESSCCBSSCBS--SG-------GGSCCCCSS
T ss_pred HHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hheeeccEEEeeccc--CC-------cEEEecCCc
Confidence 678999999999999874 3 577764 87776 589999999999974 23 34677 9
Q ss_pred ceEEEeccc-------------cCCHHHHHH-----------HHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccE
Q 013822 141 ALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKV 196 (436)
Q Consensus 141 p~Il~~d~~-------------i~~~~~i~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i 196 (436)
|+|++++++ +++++++.+ +++++.+.|+|+||++++|++.++++|..+ +|
T Consensus 245 ~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI 318 (568)
T 3p9d_H 245 HKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GI 318 (568)
T ss_dssp CEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TC
T ss_pred ceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------Ce
Confidence 999999987 566766654 688899999999999999999999999876 48
Q ss_pred EEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHH
Q 013822 197 CIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLR 273 (436)
Q Consensus 197 ~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~ 273 (436)
+|||+|+ +.+|+|||++|||+++++ ++++++++||+|+.|+ +++++|+||++|++
T Consensus 319 ~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------ 376 (568)
T 3p9d_H 319 LVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------ 376 (568)
T ss_dssp EEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------
T ss_pred EEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEecCceEEEEecCCC------------
Confidence 9999885 457999999999999997 8999999999999985 45689999999863
Q ss_pred HHhhhcccHHHHHHHhhhcCCeEEEEEccCchhHHHHHHHHHHHHHHHHHHHHH--c-CCCCCchHHHHHHHHHHHHhcC
Q 013822 274 STIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE--E-GIVPGSGVALLYASKELDKLQT 350 (436)
Q Consensus 274 ~~l~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~~l~E~~~~~~DAl~a~k~al~--~-gvV~GGGa~e~~~s~~L~~~~~ 350 (436)
|++++|||+|||+|+++++|+||++|||||++|++++ + ++|||||++|++++++|++++.
T Consensus 377 -----------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~ 439 (568)
T 3p9d_H 377 -----------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGE 439 (568)
T ss_dssp -----------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhc
Confidence 2346799999999999999999999999999999999 5 6999999999999999999876
Q ss_pred C-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----------CCCCeeEeCCCCc---cccccccCccc
Q 013822 351 T-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-----------DSSDLGYNPARGN---YVDMFKCGDVD 414 (436)
Q Consensus 351 ~-~~~~~~g~~~~a~AL~~ip~~La~NaG~d~~~i-~~l~~~-----------~~~~~G~d~~~g~---~~d~~~~gI~D 414 (436)
. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|+ +.||++.||||
T Consensus 440 ~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~d 519 (568)
T 3p9d_H 440 RTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYD 519 (568)
T ss_dssp TCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEE
Confidence 4 899999999999999999999999999999999 999874 3457999999997 99999999999
Q ss_pred ccccHHHHHHHHHHHHHHHhcC
Q 013822 415 PLKHVPSEFAKATSMISLKNAI 436 (436)
Q Consensus 415 p~~v~~~al~~A~~~a~~iL~i 436 (436)
|+.||+++|++|+|+|++||||
T Consensus 520 p~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 520 MLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp HHHHHHHHHHCCEECBCCC---
T ss_pred cHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999987
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-52 Score=371.27 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.3
Q ss_pred eEEeeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhc
Q 013822 110 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 189 (436)
Q Consensus 110 ~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~ 189 (436)
+++++||.||+||+||||++++++|.++|+||+||++|.||+++++++|+||++.++|+||+||++|++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 013822 190 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 269 (436)
Q Consensus 190 ~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~~~~~~~~i~~r~ 269 (436)
++|.+++||||+||||++|+..|+|||.+|||++++++.++++++++.++||+|++|++++++|+++.|.+++++|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccc----HHHHHHHhhhcCCeEEE
Q 013822 270 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 298 (436)
Q Consensus 270 ~~l~~~l~~~~s----~~l~~Rla~l~g~~~tI 298 (436)
++|+++++.++| ++|+||||||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 89999999999999875
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=3.4e-50 Score=361.47 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=181.1
Q ss_pred eeeEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCC
Q 013822 113 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 192 (436)
Q Consensus 113 i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~ 192 (436)
.+||.||+||+||||++++++|+++|+||+||++|.||+++++++|+||.+.++++||+||++|++++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 013822 193 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 272 (436)
Q Consensus 193 ~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~~~~~~~~i~~r~~~l 272 (436)
++++||||+|+||++|+..|+|||.+|||++++++.++++++++.++||+|++|+|++++|+++.|.+++++|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeEE
Q 013822 273 RSTIKLSTS----DKLKDRLAKLSGGYAV 297 (436)
Q Consensus 273 ~~~l~~~~s----~~l~~Rla~l~g~~~t 297 (436)
+++++.++| ++|+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999988 8999999999999974
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.4e-40 Score=285.49 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=141.9
Q ss_pred eEEEeccccccccccccccceeeecCceEEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCc
Q 013822 115 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 194 (436)
Q Consensus 115 G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~ 194 (436)
||+||+||+||||++++++|.++++||+||++|.||+++++++|+||++.++|+||+||++|++++||++|+.|+++|++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEEEecceEEEEcC
Q 013822 195 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 258 (436)
Q Consensus 195 ~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~i~~~~~~~~~~ 258 (436)
+++|||+|+||++|+..|+|||.+|||++++++.++++++++.++||+|++|++++++|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.88 E-value=3.4e-22 Score=181.65 Aligned_cols=144 Identities=10% Similarity=0.163 Sum_probs=119.3
Q ss_pred eeEEeeeEEEeccccccccccccccceeeecCceEEEeccccC-------------CHH-----------HHHHHHHHHH
Q 013822 109 ELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCM 164 (436)
Q Consensus 109 ~~~~i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~-----------~i~~~le~i~ 164 (436)
+|++++|++|++++.+|.|+ ..++||+|++++++++ +++ .+...++++.
T Consensus 3 dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68999999999999988664 3689999999998654 222 2456788899
Q ss_pred HcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCcee-e
Q 013822 165 MQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-C 243 (436)
Q Consensus 165 ~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~-a 243 (436)
+.|.++|+++++|++.|+++|..+ +|++|++. ++++|+|||++|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999999999999999999999876 47899864 5678999999999999997 89999999999 9
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEEccCchh
Q 013822 244 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 306 (436)
Q Consensus 244 ~~v~---i~~~~~~~~~~~~~~~~i~~r~~~l~~~l~~~~s~~l~~Rla~l~g~~~tI~v~G~t~~ 306 (436)
+.|+ +++++++||+||++++ .|||++||++.+
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred cEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 9986 6788999999998775 499999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.78 E-value=1.3e-18 Score=155.18 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=107.3
Q ss_pred eeeEEEeccccccccccccccceeeecCceEEEeccccC-------------CHHH-----------HHHHHHHHHHcCC
Q 013822 113 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 168 (436)
Q Consensus 113 i~G~~~d~g~~~p~~~~~~~~~~~~l~~p~Il~~d~~i~-------------~~~~-----------i~~~le~i~~~~~ 168 (436)
++|++|++++.+|.|++ .++||+|++++++++ ++++ +...++++.++|.
T Consensus 1 i~Gvv~~k~~~~~~mpk-------~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPD-------VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSCS-------EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCCc-------CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999999987643 688999999998654 3332 4567888999999
Q ss_pred CEEEEecCcchhhHHHHHHhccCCCccEEEEEeCCCccchhhHHHHHHHHhCCeEeeCCCCCCcCCCCCCCceeeeEEE-
Q 013822 169 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 247 (436)
Q Consensus 169 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~le~la~~tG~~~~s~~~~~~~~~~~~~~LG~a~~v~- 247 (436)
++|+++++|++.|+++|..+ +|++|+++ ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999999876 48899864 5678999999999999997 8999999999999985
Q ss_pred --EecceEEEEcCCCCh
Q 013822 248 --ATMDNVVIIGGSGEL 262 (436)
Q Consensus 248 --i~~~~~~~~~~~~~~ 262 (436)
+++++++||+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 678899999999875
No 32
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=35.15 E-value=80 Score=23.86 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCcchhhHHHHHHhccCCCccEEEEEe
Q 013822 151 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKA 201 (436)
Q Consensus 151 ~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~ 201 (436)
.+.+++..+++..++.|+||+++-.+-+..-.+.|-....+..+..-++|.
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnefqneakkegvsydvlks 85 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKS 85 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhcc
Confidence 456788888999999999999988877665555443222222244445554
Done!