Your job contains 1 sequence.
>013823
MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL
TLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQ
NVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKL
YNRECPYDDDDDGGGGGGMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRR
VGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKLTLSGILNFID
GLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKS
HSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGE
EANEVEHEKAKQLKTG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013823
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 774 3.9e-125 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 611 5.7e-107 2
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 620 1.7e-105 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 608 1.5e-104 2
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 604 8.4e-102 2
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 553 9.8e-97 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 492 9.3e-84 2
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 465 1.4e-80 2
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 437 2.8e-80 2
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 784 6.2e-78 1
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 404 5.9e-76 2
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 444 5.9e-74 2
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 422 5.9e-74 2
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 409 5.9e-74 2
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 389 7.6e-74 2
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 433 2.5e-73 2
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 382 1.4e-72 2
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 380 3.7e-72 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 365 2.9e-70 2
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 409 1.1e-68 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 380 2.9e-56 2
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 291 3.2e-51 3
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 296 1.7e-50 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 460 1.3e-43 1
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 268 5.4e-23 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 182 2.5e-22 3
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 166 2.8e-20 2
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 237 1.8e-19 1
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 156 2.7e-18 2
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 149 7.0e-18 2
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 152 2.9e-17 2
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 156 5.2e-17 2
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 153 6.4e-17 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 152 9.3e-17 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 143 2.1e-16 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 148 2.3e-16 2
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 158 2.4e-16 2
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 145 2.5e-16 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 151 2.8e-16 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 153 3.4e-16 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 147 8.0e-16 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 148 1.0e-15 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 144 1.0e-15 2
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 144 1.0e-15 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 148 2.1e-15 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 139 2.6e-15 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 136 7.4e-15 2
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 135 2.4e-14 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 135 3.1e-14 2
TAIR|locus:2115944 - symbol:AT4G05370 "AT4G05370" species... 165 1.5e-11 1
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 129 1.7e-11 2
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 153 2.9e-10 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 97 3.2e-10 2
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 139 4.4e-10 3
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 117 6.2e-10 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 115 3.1e-09 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 113 3.5e-09 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 106 4.5e-09 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 107 1.9e-08 2
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 111 2.3e-08 2
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 105 2.8e-08 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 113 3.0e-08 2
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 106 3.4e-08 3
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 106 3.4e-08 3
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 103 3.8e-08 2
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 103 3.8e-08 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 101 4.1e-08 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 107 4.5e-08 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 109 4.7e-08 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 109 4.7e-08 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 102 5.3e-08 2
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 101 5.4e-08 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 101 6.8e-08 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 101 6.9e-08 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 101 6.9e-08 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 101 6.9e-08 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 101 6.9e-08 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 101 6.9e-08 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 101 6.9e-08 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 101 6.9e-08 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 101 6.9e-08 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 107 7.7e-08 2
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 102 8.1e-08 2
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 106 9.1e-08 3
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 110 1.2e-07 3
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 110 1.2e-07 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 110 1.2e-07 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 109 1.2e-07 2
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 100 1.2e-07 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 100 1.3e-07 2
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 100 1.3e-07 2
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 100 1.3e-07 2
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 100 1.3e-07 2
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 100 1.3e-07 2
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 100 1.3e-07 2
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 100 1.3e-07 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 100 1.4e-07 2
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 100 1.4e-07 2
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 100 1.4e-07 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 141 1.4e-07 2
WARNING: Descriptions of 243 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 774 (277.5 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
Identities = 157/292 (53%), Positives = 209/292 (71%)
Query: 1 MF-SLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNN 59
MF S+S I + S+LF+AY++L G +ML RS N+ +P++LRSY+ T + F P S N
Sbjct: 1 MFPSISNISLSPSSLFTAYASLTGFLMLFRSLFNDEVPERLRSYI-TDLLNRFFTPKSKN 59
Query: 60 LTLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSF 119
LT+V DE G RNQVFDAAE+YLR KI P+T RL+V K +QK+FT+ IEKGEE+ D+F
Sbjct: 60 LTMVIDEIIGFKRNQVFDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTF 119
Query: 120 QNVQLQWKFVCKEPQNNHSG-EKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
+N +L+W +V E +N S EKRY+EL+F KK + V+ YL HVV ++E K++ + V
Sbjct: 120 ENSELRWTYV--ESENEASQKEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAV 177
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
KLY+R+ WG INLEHPSTF+TLAMDP K+ I+DD++RFL+R+EFY
Sbjct: 178 KLYSRDVRASKDDDGMAGAG-WGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFY 236
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
+RVGKAWKRGYLLYGPPGTGKSSLIAAMANYL ++ D + +S+ N +L
Sbjct: 237 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLEL--SSIYENAQL 286
Score = 476 (172.6 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
Identities = 95/173 (54%), Positives = 126/173 (72%)
Query: 257 TGKSSLIAAMANYLSVEMKDRQNDGASV---GSNTKLTLSGILNFIDGLWSSCGDERIIV 313
T +S L+ + S E+ DR+ D G ++TLSG+LNF+DGLWSS GDERIIV
Sbjct: 294 TNRSILVIEDIDCSSAEVVDREADEYQEYEEGYYGRVTLSGLLNFVDGLWSSFGDERIIV 353
Query: 314 FTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQS 373
FTTNHKER+DPALLRPGRMD+HINMSYCT GF+ L SNYLG+ G +H L EIE LI S
Sbjct: 354 FTTNHKERLDPALLRPGRMDMHINMSYCTGLGFRTLVSNYLGLGGLNHPLCEEIEALIDS 413
Query: 374 TDVTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVE 426
T+VTPAE+AEELM+ DD DV L G+V+F++ ++++ SK +++G +++
Sbjct: 414 TEVTPAELAEELMQEDDTDVVLRGVVSFVENRKVEI--SKTKELEGSTCRKLD 464
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 611 (220.1 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 129/299 (43%), Positives = 190/299 (63%)
Query: 1 MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL 60
MF ++P S +F+AY+++AG MM++RS A+ELIP L+ ++ T F S+ L
Sbjct: 1 MFFSKDLPSPTS-VFTAYASMAGYMMMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTL 59
Query: 61 TLVFDEWS-GMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSF 119
TL D+ + GM+ N+++ AA+ YL TKI+PD RL++SK + K+ + + GE V D +
Sbjct: 60 TLTIDDDNMGMN-NEIYRAAQTYLSTKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVY 118
Query: 120 QNVQLQWKFVC--------------------KEPQNNHSGEKRYFELSFHKKHKQTVICY 159
++VQL W+FV + + G+ YFELSF KKHK ++
Sbjct: 119 EDVQLVWRFVTDGGDKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNS 178
Query: 160 YLPHVVERAKEIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPE 219
Y+P++ +AKEI+ E +++ L++ W S+ LEHPSTF+T+AM+ +
Sbjct: 179 YVPYIESKAKEIRDERRILMLHSLN------------SLRWESVILEHPSTFETMAMEDD 226
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQ 278
LK+ +++DLDRF+RRKEFY+RVGKAWKRGYLLYGPPGTGKSSL+AAMANYL ++ D Q
Sbjct: 227 LKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQ 285
Score = 467 (169.5 bits), Expect = 5.7e-107, Sum P(2) = 5.7e-107
Identities = 96/157 (61%), Positives = 120/157 (76%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
+N G S G LTLSG+LNFIDGLWSSCGDERII+FTTNHK+R+DPALLRPGRMD+HI
Sbjct: 330 KNRGESQGP---LTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIY 386
Query: 338 MSYCTVHGFKVLASNYLGIKGKS--HSLFGEIEGLIQSTDVTPAEVAEELMKADDADVAL 395
M +C+ GFK LASNYLG+ + H LF EIE LI +TPA+VAEELMK++DADVAL
Sbjct: 387 MGHCSFQGFKTLASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSEDADVAL 446
Query: 396 EGLVNFLKRKRIQADESKNNDVKGEEAN-EVEHEKAK 431
EGLVN L++ R+++ ES +K +E+ E+E + K
Sbjct: 447 EGLVNVLEKMRLKSKESNPVMMKQKESRLEMEEMRLK 483
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 620 (223.3 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 122/292 (41%), Positives = 189/292 (64%)
Query: 10 TASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSG 69
TA T+ + +++A + ML RS + +P ++ Y+ F +F S+ +T++ +E+ G
Sbjct: 57 TAKTVLTTAASVAATAMLARSLVQDYLPDEVHHYISYGF-RSIFGYFSSQMTIIIEEFEG 115
Query: 70 MSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFV 129
+ N+VF+AAE YL TKI+P +R+KVSK ++ N+ V++E+ EEV D++ V+ QW
Sbjct: 116 FAHNEVFEAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILH 175
Query: 130 CKEPQNNH-----------SGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
C+ ++ H E R FEL+FHKK K + YLP +V+RA +KQE+K +
Sbjct: 176 CRHVESKHFHNPRDLNSTLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTL 235
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
K++ P W S+ L+HPSTF TLAMD ++K +++DLD+F++R++FY
Sbjct: 236 KIFTLS-PENMYGNYSDA---WTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFY 291
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
+RVGKAWKRGYLLYGPPGTGKSSLIAAMAN+L+ ++ D + +V +N++L
Sbjct: 292 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLEL--TAVNNNSEL 341
Score = 444 (161.4 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 93/161 (57%), Positives = 117/161 (72%)
Query: 271 SVEMKDRQNDGASVGSNT-------KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERID 323
S+E+KDR +D S+ K+TLSG+LNFIDGLWSSCGDERII+FTTN+KE++D
Sbjct: 362 SLELKDRTSDEPPRESDDIEDPRYKKVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLD 421
Query: 324 PALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAE 383
ALLRPGRMD+HI+MSYCT FK LA NYL IK H LF +IE I++T+VTPAEVAE
Sbjct: 422 AALLRPGRMDMHIHMSYCTPSTFKALALNYLEIK--EHRLFSKIEEGIEATEVTPAEVAE 479
Query: 384 ELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANE 424
+LM+ D D LEGL+ FLK K+I+ ++ K K E N+
Sbjct: 480 QLMRNDSVDKVLEGLIEFLKVKKIENEQDKAKTEKQELENK 520
Score = 90 (36.7 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 372 QSTD-VTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANE 424
+ TD V EV E+L++ D D LEGLV LK K+I+ D+ K K EE +
Sbjct: 525 EGTDSVVKKEVDEQLVRNDRVDKVLEGLVELLKAKKIEDDQDK---AKHEEVEQ 575
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 608 (219.1 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 131/292 (44%), Positives = 188/292 (64%)
Query: 10 TASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSG 69
TA T +A +++A + +L RS + +P ++ Y+ F + F+ S +T V +E+ G
Sbjct: 11 TAKTALTAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRF-FSYFSYQMTAVIEEFGG 69
Query: 70 MSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFV 129
NQVF+AAE YL TKI+ T R+KV+K +Q N++V++E+ EEV D F V+L W V
Sbjct: 70 FEHNQVFEAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILV 129
Query: 130 CKE--------PQNNHS---GEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
C+ P++ +S E R +ELSF KK K V+ YLP VVE+A IKQ+ K +
Sbjct: 130 CRHVDKKDFRNPRDLNSTLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTL 189
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
K++ + Y W S+ L+HPSTF TLA+DPE+K+ +++DLDRF++RK FY
Sbjct: 190 KIFTVDS-YSVE---------WTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFY 239
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
RVGKAWKRGYLLYGPPGTGKSSLIAA+AN+L+ ++ D D S+ +N +L
Sbjct: 240 GRVGKAWKRGYLLYGPPGTGKSSLIAAIANHLNFDIYDL--DLTSLNNNAEL 289
Score = 447 (162.4 bits), Expect = 1.5e-104, Sum P(2) = 1.5e-104
Identities = 92/158 (58%), Positives = 116/158 (73%)
Query: 257 TGKSSLIAAMANYLSVEMKDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFT 315
T S++ S+E+KDR D + K +TLSG+LNF+DGLWSSCG+ERIIVFT
Sbjct: 296 TANRSILVVEDIDCSIELKDRSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFT 355
Query: 316 TNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTD 375
TN++E++DPALLRPGRMD+HI+MSYCT FKVLASNYL I+ H LF +IE I+ +
Sbjct: 356 TNYREKLDPALLRPGRMDMHIHMSYCTPAAFKVLASNYLEIQ--DHILFEQIEEFIREIE 413
Query: 376 VTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESK 413
VTPAEVAE+LM++D D L+GLV FLK K+ Q D SK
Sbjct: 414 VTPAEVAEQLMRSDSVDKVLQGLVEFLKAKK-QIDNSK 450
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 604 (217.7 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 127/309 (41%), Positives = 194/309 (62%)
Query: 1 MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL 60
MFSL +P A + SAY++L G +M+++ F IP L++Y+ + +L + S L
Sbjct: 1 MFSLRNLPSLAPFV-SAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPST-L 58
Query: 61 TLVFDEW--SGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDS 118
TL+ D+ +GM N+++ AA++Y+ TK+N + ERL++S+ +KN + GE V+D
Sbjct: 59 TLIIDDHIKNGMY-NELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDI 117
Query: 119 FQNVQLQWKFVCKEPQNN---HSGE-------KRYFELSFHKKHKQTVICYYLPHVVERA 168
+Q ++++W+F ++N + GE + ELSF KKH + V+ Y+P+V +A
Sbjct: 118 YQGIEVKWRFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKA 177
Query: 169 KEIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDL 228
K I E K++K+Y+ C Y W S+NLEHPSTFDT+AM+ ELK+ ++ DL
Sbjct: 178 KVINNERKILKMYSYCCMYLK----------WQSVNLEHPSTFDTMAMNEELKRSVMGDL 227
Query: 229 DRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNT 288
DRF+RRK+FY+RVGK WKRGYLLYGPPGTGK+SL+AA+ANYL ++ D Q ++
Sbjct: 228 DRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADL 287
Query: 289 KLTLSGILN 297
+ L G N
Sbjct: 288 RRLLLGTTN 296
Score = 425 (154.7 bits), Expect = 8.4e-102, Sum P(2) = 8.4e-102
Identities = 90/168 (53%), Positives = 116/168 (69%)
Query: 256 GTGKSSLIAAMANYLSVEMKDR---QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERII 312
GT SS++ +V++ R + + GS+ LTLSG+L IDGLWSSCGDERI+
Sbjct: 293 GTTNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSM-LTLSGLLTCIDGLWSSCGDERIV 351
Query: 313 VFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKS-HSLFGEIEGLI 371
+FTT HKER+DPALLRPGRMD+HI+M +C FK LASNYLG+ H L+ EIE LI
Sbjct: 352 IFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLI 411
Query: 372 QSTDVTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKG 419
+ +TPA+VAEELMK +D DVALEGLV LKRKR++ ++ +G
Sbjct: 412 KGEVLTPAQVAEELMKNEDPDVALEGLVKVLKRKRLELEKYDGETGRG 459
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 553 (199.7 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 113/289 (39%), Positives = 187/289 (64%)
Query: 1 MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL 60
+FS +IP AS +FS Y+++ G +M+++ N +IP+ +++++ + + S+ L
Sbjct: 2 VFS-RDIPSPAS-MFSTYASMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFA-GSRSSTL 58
Query: 61 TLVFDEWSGMS-RNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSF 119
TL D+ S M ++++ AA+ YL TKI+P++ RL +++ +K + + GE V+D +
Sbjct: 59 TLTIDQMSSMYIPDELYAAAQAYLSTKISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVY 118
Query: 120 QNVQLQWKFVCKEPQN--------NHSG--EKRYFELSFHKKHKQTVICYYLPHVVERAK 169
++L+W+F+ + N ++ G ++ ELSF KKH+ V+ Y+P+V +AK
Sbjct: 119 NGIKLKWRFLARNKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAK 178
Query: 170 EIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLD 229
E+ + +++K++ C Y W S+N +HPSTFDT+AM+ +LK+ +++DLD
Sbjct: 179 EVNNKRRILKMH---C-YSHMAQT------WQSVNFKHPSTFDTMAMNDDLKRSMIEDLD 228
Query: 230 RFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQ 278
RF+ RK+FY+RVGKAWKRGYLLYGPPGTGKSSL+AAMANYL ++ D Q
Sbjct: 229 RFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQ 277
Score = 428 (155.7 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 89/141 (63%), Positives = 109/141 (77%)
Query: 290 LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVL 349
LTLSG+LN IDGLWSSCG+ERII+FTTN+KE++DPALLRPGRMD+HI M +C+ GFK L
Sbjct: 334 LTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGHCSFQGFKTL 393
Query: 350 ASNYLGIKGKS---HSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
ASNYLG+ ++ H L +I+ LI +TPA+VAEELMK +DAD ALEGLV LKRKR
Sbjct: 394 ASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDEDADAALEGLVKVLKRKR 453
Query: 407 IQA----DESKNNDVK-GEEA 422
++ DESK +K GEEA
Sbjct: 454 LEPKKCDDESKMKKLKEGEEA 474
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 492 (178.3 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 104/284 (36%), Positives = 161/284 (56%)
Query: 11 ASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWS-- 68
A LF T S+M S + +P Q+R YL FY +F +SN++ + F E++
Sbjct: 4 AGGLFGFTGTTMASLMFFWSVYRQFVPYQIRDYLEKCFYK-MFGLVSNSVHIKFTEYTED 62
Query: 69 -GMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWK 127
G+ ++Q +D YL +K +RLK +++ K+ +S++ E V D FQ V++ W
Sbjct: 63 KGLKKSQAYDLIRNYLSSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWS 122
Query: 128 F-VCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECP 186
V K S EKRY LSFH ++++ + YL HV+ KEI + + KLY
Sbjct: 123 LSVWKSNDQADSSEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNN-- 180
Query: 187 YXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWK 246
W ++ +HP+TF+TLAMD E K+ + DL +F + K++YR+VGK WK
Sbjct: 181 -SSQDYSAWREGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWK 239
Query: 247 RGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
RGYLL+GPPGTGKS++I+AMAN+L ++ D + +V N++L
Sbjct: 240 RGYLLFGPPGTGKSTMISAMANFLEYDVYDLEL--TTVKDNSEL 281
Score = 366 (133.9 bits), Expect = 9.3e-84, Sum P(2) = 9.3e-84
Identities = 76/147 (51%), Positives = 103/147 (70%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
+K+TLSG+LN IDGLWS+C E+IIVFTTN+ +++DPAL+R GRMD HI MSYC FK
Sbjct: 341 SKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFK 400
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM-KAD--DADVALEGLVNFLKR 404
VLA NYL I+ SH LFGEI+ L++ TD++PA+VAE LM K+D DAD+ L LV L+
Sbjct: 401 VLAKNYLEIE--SHDLFGEIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSLEE 458
Query: 405 KRIQADESKNNDVKGEEANEVEHEKAK 431
++ +A + + + A + K K
Sbjct: 459 EKEKAKKLAEEEKMKKAARDARRIKKK 485
Score = 44 (20.5 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 12/51 (23%), Positives = 30/51 (58%)
Query: 383 EELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEV-EHEKAKQ 432
+ ++ +D D +L+ L K+K+ + DE + + K +EA ++ + E+ ++
Sbjct: 291 KSIVVIEDIDCSLD-LTGQRKKKK-EEDEDEEEEEKKKEAEKLLKRERGER 339
Score = 40 (19.1 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 404 RKRIQADESKNNDVKGEEANEVEHEKAKQL 433
+K+ + + K N V EE +V H+ +
Sbjct: 483 KKKAEEEHKKKNKV--EENGDVSHDNGNHI 510
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 465 (168.7 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 99/279 (35%), Positives = 161/279 (57%)
Query: 20 TLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWS--GMSRNQVFD 77
T S M + + +P R+Y+ ++H + +S + + F E++ G+ R+Q +D
Sbjct: 13 TTVTSFMFFWAIYKQYVPAHFRAYV-ERYFHKMIGWISYYVDIKFTEYTDEGLKRSQAYD 71
Query: 78 AAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCK--EPQN 135
+ YL +K +RLK ++T K+ S++ EE+ D F+ V+++W K +PQ+
Sbjct: 72 SIRNYLASKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKVIQPQS 131
Query: 136 NH----SGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYXXXX 191
N+ S E+R+F LSFH++H+ +I YL HV+ K I + KLY
Sbjct: 132 NYGQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNN---SSQE 188
Query: 192 XXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLL 251
W ++ HP+TF+TLAMDPE K+ I DL +F + K++Y++VGK WKRGYLL
Sbjct: 189 WYPWRSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLL 248
Query: 252 YGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
+GPPGTGKS++IAA+AN+L ++ D + +V N++L
Sbjct: 249 FGPPGTGKSTMIAAIANFLDYDVYDLEL--TTVKDNSEL 285
Score = 363 (132.8 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 79/172 (45%), Positives = 112/172 (65%)
Query: 273 EMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRM 332
E K+ + +K+TLSG+LN IDGLWS+C E+IIVFTTN +++DPAL+R GRM
Sbjct: 327 EKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRM 386
Query: 333 DVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM-KAD-- 389
D HI MSYC FKVLA NYL I+ +H L+GEIE ++ TD++PA+VAE LM K+D
Sbjct: 387 DNHIEMSYCKFEAFKVLAKNYLEIE--THDLYGEIERKLEETDMSPADVAETLMPKSDEE 444
Query: 390 DADVALEGLVNFLK------RKRIQADESKNNDVKGEEANEVEHEKAKQLKT 435
DAD+ ++ LV L+ RK + +E K + + ++ + E + K+ KT
Sbjct: 445 DADICIKRLVKTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKT 496
Score = 49 (22.3 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 382 AEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEK 429
A+++ KA++A+ + K+++++A E +N +V + N ++ K
Sbjct: 480 AKKMKKAEEAEEKKKKTEEDEKKEKVKAKE-ENGNVSQQNGNSIDLNK 526
Score = 49 (22.3 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 13/56 (23%), Positives = 32/56 (57%)
Query: 382 AEELMKADDADVALEGLVNFLKRKRIQADESKNNDVK-GEEANEVEHEKAKQLKTG 436
++ ++ +D D +L+ L K+K+ + +E + K GE+ +V+ +++K +G
Sbjct: 294 SKSIIVIEDIDCSLD-LTGQRKKKKEEDEEEDGEEKKEGEKKPKVDDKQSKVTLSG 348
Score = 42 (19.8 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 404 RKRIQADESKNNDVKGEEANEVEHEKAKQ 432
+K +A+E++ K EE + E KAK+
Sbjct: 481 KKMKKAEEAEEKKKKTEEDEKKEKVKAKE 509
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 437 (158.9 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 96/280 (34%), Positives = 163/280 (58%)
Query: 5 SEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVF 64
S++P + S +FS Y++ + ML R+ NE++P+++R Y+ + + ++ T V
Sbjct: 6 SQVP-SVSAVFSLYTSFSAITMLFRTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVI 64
Query: 65 DE-WSGMSRNQVFDAAELYLRTKI-NPDTERLKVSKTSRQKNFTVSIEKG----EEVTDS 118
++ W + NQ F AAE+YL T + T +L V +S KN + G ++ D+
Sbjct: 65 EQRWEFVE-NQTFRAAEVYLPTCLAGLSTGKLLVG-SSNLKNPAAEPKLGIPVNTKIIDN 122
Query: 119 FQNVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
F+ + L+W E + + EKRYF L+ K+ ++ ++ Y ++ + A++I + +
Sbjct: 123 FEGIHLEWTLHSVETKK-YLPEKRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENL 181
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
K+Y Y W S EH +TF+TLA++P+LK+ ++DDLD F + K+F+
Sbjct: 182 KIYT----YNQDRSK------WESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFF 231
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQ 278
+ VG+AWKRGYLLYGPPGTGKSS++AA+AN++ + D Q
Sbjct: 232 KSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQ 271
Score = 388 (141.6 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 78/146 (53%), Positives = 102/146 (69%)
Query: 290 LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVL 349
++LSG+LNF+DGLWSSCG+E+II+FTTNHKE++DPALLRPGRMDVHI M CT FK L
Sbjct: 336 ISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCTPFVFKKL 395
Query: 350 ASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVNFLKRKRIQA 409
+ YL K H LF IE LI TPAEV ++LM + +AD+AL+GL FL+ K+++
Sbjct: 396 VALYL--KTDEHVLFDPIEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENKKLK- 452
Query: 410 DESKNNDVKGEEANEVEHEKAKQLKT 435
K D EE E+E + K+ +T
Sbjct: 453 ---KGEDSSVEEEGEIEDAETKEAET 475
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 153/278 (55%), Positives = 203/278 (73%)
Query: 1 MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL 60
MF S+ + S+LFSAY++L G +ML RS ++ +P++LRSY + + F P S L
Sbjct: 1 MFPSSDFSFSPSSLFSAYASLTGFLMLFRSMLHDFVPEKLRSYFSSLLDRF-FTPKSKYL 59
Query: 61 TLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQ 120
T++ DE G++RNQVFDAAE+YLR+KI P+TERL+V K +QK+FT+SIE+GEE+ D+F+
Sbjct: 60 TVIIDENFGLNRNQVFDAAEMYLRSKIGPETERLRVGKIPKQKHFTISIERGEEILDTFE 119
Query: 121 NVQLQWKFVCKEPQNNHSGEK--RYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
+++W +V E N G+K RY+EL+F KK + V+ YL HVV ++EIK+ +VV
Sbjct: 120 ESEVKWSYVQSE---NEKGDKVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVV 176
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
KLY+R+ Y WG INLEHPSTFDTLAMDP K+ I+DDL+RFL+RKEFY
Sbjct: 177 KLYSRDV-YASDDDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFY 235
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKD 276
+RVGKAWKRGYLLYGPPGTGKSSLIAAMANYL ++ D
Sbjct: 236 KRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFD 273
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 96/194 (49%), Positives = 131/194 (67%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQND 280
K ++ + +L+ F + + G L T S++ + E++DR+ +
Sbjct: 256 KSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCNAEVRDREAE 315
Query: 281 GASVGS-NTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
K+TLSGILNFIDGLWSS GDERIIVFTTNHKER+DPALLRPGRMDVHINMS
Sbjct: 316 NQEDEQIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMS 375
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLV 399
YCT GF+ L SNYLG+ G +H L EIE L+ ST+VTPAE+AEELM+ DD DV L G++
Sbjct: 376 YCTGLGFRTLVSNYLGLDGLNHPLCEEIEALVDSTEVTPAELAEELMQDDDTDVVLRGVI 435
Query: 400 NFLKRKRIQADESK 413
+F+++++++ ++K
Sbjct: 436 SFVEKRKVERSKTK 449
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 404 (147.3 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 87/259 (33%), Positives = 139/259 (53%)
Query: 24 SMMLLRSFANELIPQQLRSYLCTTFYHYL---FNPLSNNLTLVFDEWSG--MSRNQVFDA 78
S+M L + +P QLR YL T YL F SN + + F E++G +S+++ +D
Sbjct: 3 SIMFLWPMYKQFVPYQLREYLENTIQKYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDE 62
Query: 79 AELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQNNH- 137
YL + +RLK ++ K+ + ++ E V FQ V + W + ++ H
Sbjct: 63 IGNYLSSISTARAKRLKAKESENSKSLVLCLDDDEAVVVVFQGVNVVWSSTVVDKEDKHN 122
Query: 138 SGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYXXXXXXXXXX 197
S E RY L+F H+ + Y+ HV+ KEI + + KLY
Sbjct: 123 SKEGRYLTLTFENHHRDIITNTYIDHVLREGKEIALKNRERKLYTNN---DSSSYSSWWE 179
Query: 198 XMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGT 257
+W ++ H ++F+TL MD + K+ I DL +F + K++YR+V K WKRGYLL+GPPGT
Sbjct: 180 GLWSNVPFNHHASFETLGMDLDKKEEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGT 239
Query: 258 GKSSLIAAMANYLSVEMKD 276
GKS++I+A+AN+L ++ D
Sbjct: 240 GKSTMISAIANFLEYDVYD 258
Score = 380 (138.8 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 84/169 (49%), Positives = 114/169 (67%)
Query: 273 EMKDRQNDGASVGSN-TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGR 331
E K+ +N G+N + +TLSG+LN IDGLWS+C DE+II+FTTN + +DPAL+R GR
Sbjct: 310 EKKEAENLKRVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGR 369
Query: 332 MDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM-KAD- 389
MD HI MSYC FKVLA NYL + +SH L+GEI L++ DV+PA+VAE LM K+D
Sbjct: 370 MDYHIEMSYCRFEAFKVLAKNYL--ENESHDLYGEIGRLLEEVDVSPADVAENLMPKSDE 427
Query: 390 -DADVALEGLVNFL---KRKRIQADESKNNDVKGEEANEVEHEKAKQLK 434
DAD+ LV L K+K+I+ E++ N K E+ V+ EK ++K
Sbjct: 428 DDADICFRRLVKSLEEEKKKKIEK-EARKNKKKAED--NVKQEKQNKVK 473
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 444 (161.4 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 96/282 (34%), Positives = 155/282 (54%)
Query: 15 FSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSGMSRNQ 74
+++ ++L G + +S + P +LR + F++ +F+ S+ E G++ N+
Sbjct: 5 WTSLASLLGVLAFCQSLMQSIFPPELR-FAFLKFFNRIFHVFSSYCYFDITEIDGVNTNE 63
Query: 75 VFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQ 134
+++A +LYL + ++ RL +++ + T + + + D+F V + W+ V + Q
Sbjct: 64 LYNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVTQRQ 123
Query: 135 NNHSG------EKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYX 188
EKR F L KK K ++ YL +++ERA EI+++ + LY
Sbjct: 124 TQTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNS---- 179
Query: 189 XXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
W S+ +HPSTF+TLAMDP KQ I+DDL F + FY++ G+AWKRG
Sbjct: 180 RGGSLDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRG 239
Query: 249 YLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
YLLYGPPGTGKSS+IAAMANYL ++ D + V SN++L
Sbjct: 240 YLLYGPPGTGKSSMIAAMANYLGYDIYDLEL--TEVHSNSEL 279
Score = 321 (118.1 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 70/181 (38%), Positives = 108/181 (59%)
Query: 260 SSLIAAMANYLSVEMKDRQNDGASV-----GSNTKLTLSGILNFIDGLWSSCGDERIIVF 314
SS +++ +Y E ++ G+ G+ +TLSG+LNF DGLWS CG ERI VF
Sbjct: 310 SSNVSSQRSYYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTDGLWSCCGSERIFVF 369
Query: 315 TTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLG--IKGKSHSLFGEIEGLIQ 372
TTNH E++DPALLR GRMD+HI MS+C K+L NYLG ++ + + E+E +++
Sbjct: 370 TTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVEDINGDVLKEMEMVVE 429
Query: 373 STDVTPAEVAEELMK-ADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKAK 431
++TPA+V+E L+K D + A+ L+ LK + + K+ ++G N E E +
Sbjct: 430 KAEMTPADVSEALIKNRRDKEKAIRELLEDLKSRGER--NVKDGKLRGGSGNLTELEVVE 487
Query: 432 Q 432
+
Sbjct: 488 E 488
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 422 (153.6 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 100/284 (35%), Positives = 155/284 (54%)
Query: 16 SAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSG--MSRN 73
SA +TL + + F L QL +L F F P + + F E+SG R+
Sbjct: 13 SALATLMFVYTIFKQFF-PLFGPQLEPFLYRLFGR--FYPY---IQITFHEYSGEHFKRS 66
Query: 74 QVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEP 133
+ + + YL + ++LK + T K+ +S++ EE+TD F+ +++ W+ KE
Sbjct: 67 EAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIRVWWQSK-KEG 125
Query: 134 QNNHS-------GEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECP 186
S EKRY+ L FH++ ++ +I YL HV+ K I+Q+ + KLY+ P
Sbjct: 126 ATRQSFSFYPEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYSNT-P 184
Query: 187 YXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWK 246
W + EHP+TFDTLAM+ K+ I DL +F + K++Y+++GKAWK
Sbjct: 185 ----GQSHGNNSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWK 240
Query: 247 RGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
RGYLL+GPPGTGKS++IAAMAN+L ++ D + +V NT L
Sbjct: 241 RGYLLFGPPGTGKSTMIAAMANFLEYDVYDLEL--TTVKDNTHL 282
Score = 343 (125.8 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 74/167 (44%), Positives = 108/167 (64%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
+N+G + +K+TLSG+LNFIDGLWS+CG ERIIVFTTN +++DPAL+R GRMD HI
Sbjct: 333 KNEGEN--KESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIE 390
Query: 338 MSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDV--TPAEVAEELM---KADDAD 392
MSYC FKVLA NYL ++ +F EI+ L++ ++ TPA+V E L+ + + +
Sbjct: 391 MSYCCFEAFKVLAKNYLDVE--ESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGE 448
Query: 393 VALEGLVNFLKRKRIQA-----DESKNNDVKGEEANEVEHEKAKQLK 434
L+ L+ LK ++ +A +E + K E+ E+E EK K+ K
Sbjct: 449 TCLKRLIEALKEEKEEAKKKVEEEEEEKQRKKEKVKEIEAEKEKKKK 495
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 409 (149.0 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 92/280 (32%), Positives = 153/280 (54%)
Query: 19 STLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSG--MSRNQVF 76
S LA S++ + + P +LR + L + + + F E+SG R+ V+
Sbjct: 13 SALA-SLVFIYTIFERFFPYRLREHF-EPLAQSLIGFIYPYIQITFHEYSGERFKRSDVY 70
Query: 77 DAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQNN 136
DA + YL + ++L + K+ +S++ EE+TD FQ V++ W+ + ++
Sbjct: 71 DAIQSYLSKDSSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSKKHQSESR 130
Query: 137 ------HSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYXXX 190
+ E R++ L FH++ ++ + YL HV+ K I+ + + KLY+ P
Sbjct: 131 AISFYPKADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSNN-P--SQ 187
Query: 191 XXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYL 250
W + EHP+TFDTLAM+ + K+ I +DL +F K++Y+++GKAWKRGYL
Sbjct: 188 NWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWKRGYL 247
Query: 251 LYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
L+GPPGTGKS++IAAMAN L ++ D + +V NT+L
Sbjct: 248 LFGPPGTGKSTMIAAMANLLEYDVYDLEL--TTVKDNTEL 285
Score = 356 (130.4 bits), Expect = 5.9e-74, Sum P(2) = 5.9e-74
Identities = 75/170 (44%), Positives = 115/170 (67%)
Query: 272 VEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGR 331
+E + +++ G + GS K+TLSG+LNFIDGLWS+CG ERIIVFTTN +++DPAL+R GR
Sbjct: 329 IEKQMKKDQGENKGS--KVTLSGLLNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGR 386
Query: 332 MDVHINMSYCTVHGFKVLASNYLGIKGKS-HSLFGEIEGLIQSTDV--TPAEVAEELMKA 388
MD HI MSYC FKVLA+NYL K + + LF EI+ L++ ++ TPA+V E L+K
Sbjct: 387 MDKHIEMSYCGFEAFKVLANNYLDAKEEDDNELFDEIKRLLEVEEIKMTPADVGENLLKK 446
Query: 389 DDAD---VALEGLVNFLKRKRIQADES-KNNDVKGEEANEVEHEKAKQLK 434
+ + + L+ L+ LK ++ +A ++ + K +E E++ +K ++ K
Sbjct: 447 SEVETKEICLKRLIEALKEEKEEAKRRIEDEEKKKKEEEEIKRKKREEKK 496
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 389 (142.0 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 86/250 (34%), Positives = 132/250 (52%)
Query: 48 FYHYLFNPLSNNLTLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTV 107
F N S + + F E+ N FD E YL K + L+ S+ K +
Sbjct: 49 FSDKFINFFSPYVQINFSEYEDYRVNHAFDPIETYLGAKATDKAKHLRASQVRESKGLVL 108
Query: 108 SIEKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVER 167
++ +V D ++ +++ W E + + +G K +L+FH++ + V Y+ +VVE
Sbjct: 109 KRDE-TKVRDEYEGIRVWW-----EMETDSAGYKT-LKLTFHRRSRDIVTNSYIKYVVEE 161
Query: 168 AKEIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDD 227
K I + K +KL+ P W I+ EHP+TF+TLAMDP+ K+ IL+D
Sbjct: 162 GKSIDAKNKKMKLFTNN-P--SSHWGSSKTSFWRYIDFEHPATFETLAMDPKKKEQILND 218
Query: 228 LDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSN 287
L F K++Y+++GKAWKRGYLLYGPPGTGKS++IAAMAN L+ + D + S
Sbjct: 219 LAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSE 278
Query: 288 TKLTLSGILN 297
+ L+ N
Sbjct: 279 LRKILTATSN 288
Score = 375 (137.1 bits), Expect = 7.6e-74, Sum P(2) = 7.6e-74
Identities = 81/160 (50%), Positives = 105/160 (65%)
Query: 270 LSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRP 329
L + KD D + + +TLSG+LNFIDG+WS+CG ERIIVFTTNH ++DPAL+R
Sbjct: 314 LMIWRKDGDQDNEE--NKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRR 371
Query: 330 GRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKAD 389
GRMD+HI +SYCT FK LA NYL + SH LF +IE L++ T++ PA+VAE LMK +
Sbjct: 372 GRMDMHIELSYCTFEAFKTLAKNYLDLD--SHPLFSKIESLMKETNIAPADVAENLMKKN 429
Query: 390 ---DADVALEGLVNFLKRKR----IQADESKNNDVKGEEA 422
DAD +L L+ L+RK+ Q DE K K EA
Sbjct: 430 RETDADGSLNDLIESLERKKKVQIAQVDEHKEYSNKIVEA 469
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 433 (157.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 95/282 (33%), Positives = 152/282 (53%)
Query: 15 FSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSGMSRNQ 74
+++ ++L G + +S N + P +LR + + ++ F S E G++ N+
Sbjct: 5 WTSLASLLGVLAFCQSLMNSVFPPELR-FAISKLFNKFFKLFSTFCYFDITEIDGVNTNE 63
Query: 75 VFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQ 134
+++A +LYL + ++ RL +++ + T + + + D+F +V + W+ + + Q
Sbjct: 64 LYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVTQRQ 123
Query: 135 NNHSG------EKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYX 188
EKR F L KK K ++ YL +++E+A EI++ + LY
Sbjct: 124 TQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNS---- 179
Query: 189 XXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
W S+ +HPSTFDTLAMDP KQ I++DL F + FY R G+AWKRG
Sbjct: 180 RGGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRG 239
Query: 249 YLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
YLLYGPPGTGKSS+IAAMANYL ++ D + V SN++L
Sbjct: 240 YLLYGPPGTGKSSMIAAMANYLRYDIYDLEL--TEVKSNSEL 279
Score = 326 (119.8 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 72/164 (43%), Positives = 101/164 (61%)
Query: 268 NYLSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALL 327
+Y EM G +G +TLSG+LNF DGLWS CG ERI VFTTNH E++DPALL
Sbjct: 314 SYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALL 373
Query: 328 RPGRMDVHINMSYCTVHGFKVLASNYLGIK-GKSHSL-FGEIEGLIQSTDVTPAEVAEEL 385
R GRMD+HI+MSYCT K+L NYLG + G + + E+ ++ ++TPA+V+E L
Sbjct: 374 RSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSEAL 433
Query: 386 MK-ADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHE 428
+K D + A+ L+ L R R++ +E KN + + + E E
Sbjct: 434 IKNRRDKERAVRELLVDL-RSRVERNE-KNGKSRVQNVSLEEQE 475
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 382 (139.5 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 93/292 (31%), Positives = 147/292 (50%)
Query: 15 FSAYSTLAGSMMLLRSFANELIPQQLR----SYLCTTFYHYLF-NPLSNNLTLVFD---- 65
F + + S+ L + ++ P L+ +L ++F F +S++ T +F
Sbjct: 8 FGSIGSSMASLFFLWATIQQIFPDHLKITIKEFLLSSFQQLCFAQRVSDHFTNLFSPYVE 67
Query: 66 ----EWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQN 121
E S NQ F A + YL +K T+ L+ S+ K + + + V D ++
Sbjct: 68 IHFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKESKGLVLKRNEAK-VRDEYKG 126
Query: 122 VQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLY 181
+ W+ V N RY++L+FH + + + Y+ +VVE K I + K +L+
Sbjct: 127 ANVWWERVVDNDGN------RYYKLTFHNRARTLITNSYIKYVVEEGKSIIVKNKQTRLF 180
Query: 182 NRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRV 241
MW SI EHP++F TLAMDP+ K+ I++DL F KE+Y+++
Sbjct: 181 TNNL----STQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNGKEYYKKI 236
Query: 242 GKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKLTLS 293
GKAWKRGYLLYGPPGTGKS++I+AMAN L+ + D + S K L+
Sbjct: 237 GKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLT 288
Score = 370 (135.3 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 73/158 (46%), Positives = 103/158 (65%)
Query: 267 ANYLSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPAL 326
+N + E R+ G +TLSG+LNFIDG+WS+CG ERI+VFTTNH E++DPAL
Sbjct: 309 SNRIKKESNSRERYGKEDKDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPAL 368
Query: 327 LRPGRMDVHINMSYCTVHGFKVLASNYLGIKGK-SHSLFGEIEGLIQSTDVTPAEVAEEL 385
+R GRMD+HI +SYCT FK+LA NYL + G +H LF EI+ L++ T ++PA+VAE L
Sbjct: 369 IRRGRMDMHIELSYCTYEAFKILAKNYLDLDGDDAHPLFSEIKALLEETKISPADVAENL 428
Query: 386 MKAD---DADVALEGLVNFLKRKRIQADESKNNDVKGE 420
M + D D +L L++ L+ + Q S+ K +
Sbjct: 429 MARNQQIDVDKSLNLLISALEEEN-QYQRSQQEKKKSK 465
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 380 (138.8 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 75/132 (56%), Positives = 98/132 (74%)
Query: 273 EMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRM 332
E+KD + D SN +TLSG+LNFIDG+WS+CG ERI+VFTTNH ++D AL+R GRM
Sbjct: 307 EVKDLKGDKEGKKSNA-VTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRM 365
Query: 333 DVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDAD 392
D+HI +SYCT FK+LA NYL I SH LFGEIE L++ T +TPA+VAE +M A + D
Sbjct: 366 DMHIELSYCTFGAFKILAKNYLNID--SHHLFGEIESLLKETKITPADVAEHMM-AKEVD 422
Query: 393 VALEGLVNFLKR 404
+L+GL+ L+R
Sbjct: 423 GSLKGLIRALER 434
Score = 368 (134.6 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 99/292 (33%), Positives = 154/292 (52%)
Query: 11 ASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHY-LFNPLSNNLT-------- 61
A L S +AG + + S P+Q++ L +F LS+ +
Sbjct: 3 AENLTRIGSNVAG-LFFVWSTLKRYFPRQIQQLLFNAIQRIPIFKRLSDKILEFFSPYAY 61
Query: 62 LVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGE-EVTDSFQ 120
+ F E G N F A + YL K+N + + LK ++ ++N ++ +++ + ++ + ++
Sbjct: 62 IRFREIEGYRYNYAFAAVKTYLGAKVNSEVKNLKGNQV--KENMSLDLKRDDVKIEEEYE 119
Query: 121 NVQLQWK-FVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIK-QEEKVV 178
V++ W+ F C + G K+ L+FH+ + V YL +VVE K IK +++KV+
Sbjct: 120 GVKMWWEIFRCVK------G-KKICRLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKKVM 172
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
L N P +W EHP+TFDTLAMD + K I DL F KE+Y
Sbjct: 173 VLMNN--P--SLNWKTSMKGLWTCTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYY 228
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
R+GKAWKRGYLLYGPPGTGKS++IAAMAN + + D + S+G+N +L
Sbjct: 229 DRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDLEL--TSIGNNWEL 278
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 365 (133.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 78/154 (50%), Positives = 106/154 (68%)
Query: 274 MKDRQNDGASVGSNTK--LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGR 331
M R+ DG K +TLSG+LNFIDG+WS+CG ERII+FTTNH E++DPAL+R GR
Sbjct: 315 MTSRE-DGEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGR 373
Query: 332 MDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKAD-- 389
MD+HI +SYC+ FK+LA NYL + +H LF +IE L++ T + PA+VAE LMK +
Sbjct: 374 MDMHIELSYCSFEAFKILAKNYLDLD--THPLFKKIESLLKETKIAPADVAENLMKKNTE 431
Query: 390 -DADVALEGLVNFLK-RKRI---QADESKNNDVK 418
DAD +L+ L+ L+ +K+I Q DE K+ K
Sbjct: 432 IDADGSLKDLIQALEGKKKIHGAQVDEPKDKYTK 465
Score = 365 (133.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 86/253 (33%), Positives = 138/253 (54%)
Query: 38 QQLRSYLCTTFYHYLFNPLSNNLTLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVS 97
QQL S++ F N S + + F ++ N F A E YL K + L+ S
Sbjct: 42 QQL-SFV-QRFSDRFINFFSPYVEISFSQYEDYQFNHAFAAIETYLGAKATDKAKHLRAS 99
Query: 98 KTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVI 157
+ K + ++ +V D ++ + W E + + +G R F+L+FH++ + V
Sbjct: 100 QVKESKGLVLKRDE-TKVRDEYEGGTVWW-----EMETDSTGY-RTFKLTFHRRSRDIVT 152
Query: 158 CYYLPHVVERAKEIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMD 217
Y+ +V E K I+ + K +KL+ P W I+ EHP++F TLAMD
Sbjct: 153 DSYIKYVFEEGKSIQAKSKQMKLFTNN-P--SSHWGTSKKSFWRYIDFEHPASFHTLAMD 209
Query: 218 PELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDR 277
+ K+ IL+DL F KE+Y+++GKAWKRGYLL+GPPGTGKS++IAAMAN+L+ + D
Sbjct: 210 TKKKEEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDL 269
Query: 278 QNDGASVGSNTKL 290
+ ++ +N++L
Sbjct: 270 EL--TAIRNNSEL 280
Score = 40 (19.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 98 KTSRQKNFTVSIEKGEEVTD 117
K ++KN S E GE+ T+
Sbjct: 307 KRKKEKNLMTSREDGEQGTE 326
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 409 (149.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 97/292 (33%), Positives = 156/292 (53%)
Query: 16 SAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLF---NPLSNNLTLVFDEWSGMSR 72
S Y T S++ + +F ++ L F H+L + S+++ E G++
Sbjct: 2 SDYWTTMASLLGMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVNT 61
Query: 73 NQVFDAAELYLRTKI--------NPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQL 124
N++++A +LYL + + + + RL +++ + T + + +TD F V +
Sbjct: 62 NELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVTI 121
Query: 125 QWKFVCKEPQ-NNHSG-----EKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVV 178
W+ V + Q + S EKR F L +K+ K V+ YL ++V +++EI++ +
Sbjct: 122 LWEHVVVQRQVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEER 181
Query: 179 KLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFY 238
LY W S+ +HPSTFDTLAMDPE K+ I++DL F + FY
Sbjct: 182 LLYTNS----RGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFY 237
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDGASVGSNTKL 290
++ G+AWKRGYLLYGPPGTGKSSLIAAMANYL ++ D + V +N++L
Sbjct: 238 QKTGRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLEL--TEVQNNSEL 287
Score = 306 (112.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 62/152 (40%), Positives = 98/152 (64%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
+ +TLSG+LNF DGLWS CG E+I VFTTNH E++D AL+R GRMD+H++M +C K
Sbjct: 341 SSVTLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALK 400
Query: 348 VLASNYLGIKGKSHS--LFGEIEGLIQSTDVTPAEVAEELMK-ADDADVALEGLVNFLKR 404
+L NYL ++ + + E+E ++ ++TPA+V+E L++ DA+ A+ +V+ LK
Sbjct: 401 ILLKNYLRLEEEDMDSVVLKEMEECVEEAEITPADVSEVLIRNRSDAEKAVREIVSVLKE 460
Query: 405 KRIQADES---KNNDVKG-EEANEVEHEKAKQ 432
+ ++ +S K +G EE E E E+ K+
Sbjct: 461 RVVKRRKSVGLKKKKQEGQEEEEEAEEEQEKR 492
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 380 (138.8 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 76/140 (54%), Positives = 99/140 (70%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
+N + K+TLSG+LNF+DGLWSSC +ERII+FTTNHKE++DPALLRPGRMDVHI
Sbjct: 112 ENQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHIL 171
Query: 338 MSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEG 397
M YCT FK LA+ YL I+ H LF IE + TPAE+ E+LM + D DV L+G
Sbjct: 172 MDYCTPIVFKKLAALYLEIE--EHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKG 229
Query: 398 LVNFLKRKRIQADESKNNDV 417
LV FL+ K++ ES ++++
Sbjct: 230 LVEFLESKKM-TKESVDSEI 248
Score = 217 (81.4 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 38/63 (60%), Positives = 51/63 (80%)
Query: 216 MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMK 275
M+PELK ++ DLD F K+F++ VG+AWKRGYLLYGPPGTGKSSL+AA+AN+++ +
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 276 DRQ 278
D Q
Sbjct: 61 DLQ 63
Score = 40 (19.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 372 QSTDVTPAEVAEELMKADDADVALEGLVNFL 402
++ D T + K D V L GL+NF+
Sbjct: 103 ENKDETEYGENQNKKKKKDPKVTLSGLLNFV 133
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 291 (107.5 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 61/162 (37%), Positives = 101/162 (62%)
Query: 114 EVTDSFQNVQLQWK-FVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIK 172
E D +Q +L+W+ FV K N K+ FEL F +KH+ V Y+P V +AKEIK
Sbjct: 78 EFDDIYQGAKLKWRIFVDKNNIGNIP--KQCFELRFDEKHRDLVFDSYIPFVESKAKEIK 135
Query: 173 QEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFL 232
++++++++ Y W + L+H S+F+T+ M +LK+ ++DD+D F+
Sbjct: 136 SKKRILEMHT----YSHCCDT------WETKILDHHSSFETIVMKEDLKRRLIDDIDLFI 185
Query: 233 RRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEM 274
+++FY+RVG+ W R YLL+G PG GK+SL+AA+A YL+ ++
Sbjct: 186 SKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKYLNFDV 227
Score = 248 (92.4 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 60/147 (40%), Positives = 85/147 (57%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
+K+ LS +L+ + WS+ G R+++FTTN+KER D LL RM++ I M +C FK
Sbjct: 265 SKVALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFK 321
Query: 348 VLASNYLGIKGKS---HSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVNFLKR 404
LASNYLGI + H L+ +I+ LI VTP +V EELMK+ D DVAL+ LV +
Sbjct: 322 TLASNYLGISHDNDAPHRLYPDIKRLIDGQAVTPGQVVEELMKSQDVDVALQSLVRY--- 378
Query: 405 KRIQADESKNNDVKGEEANEVEHEKAK 431
SK ND ++ ++ E K
Sbjct: 379 -----SSSKENDHIDDDLPQIPEETRK 400
Score = 67 (28.6 bits), Expect = 3.2e-51, Sum P(3) = 3.2e-51
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 25 MMLLRSFANELIPQQLRSYLCTTFYHYLFNPLS-----NNLTLVFDEWSGMSR-NQVFDA 78
+ L++S + I + ++ YL ++ YL P S N +T++ +E S R N + A
Sbjct: 3 LKLIKSMV-QAITRPIQ-YLIISYLRYLVGPPSLTHHDNQVTVIIEETSENGRINVIHGA 60
Query: 79 AELYLRTKINPD 90
+ YL KIN D
Sbjct: 61 TQAYLFDKINLD 72
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 296 (109.3 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 68/210 (32%), Positives = 108/210 (51%)
Query: 70 MSRNQVFDAAELYLRT--KI-NPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQW 126
+ N ++ +YL + I N D L K S + + +++ + V D F ++ W
Sbjct: 60 VQENHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNE--IILRLDRNQVVGDEFLGARVCW 117
Query: 127 KFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECP 186
+ E ++ R F L K K+ ++ YL H+ + E++Q +KL+
Sbjct: 118 --INGEDEDG----ARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELKLFINVGI 171
Query: 187 YXXXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWK 246
W SI +HP TFD +AM+ +LK + DL+ FL+ K++Y R+G+ WK
Sbjct: 172 DDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLESFLKGKQYYNRLGRVWK 231
Query: 247 RGYLLYGPPGTGKSSLIAAMANYLSVEMKD 276
R YLLYGP GTGKSS +AAMAN+L ++ D
Sbjct: 232 RSYLLYGPSGTGKSSFVAAMANFLDYDVYD 261
Score = 280 (103.6 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 58/120 (48%), Positives = 83/120 (69%)
Query: 287 NTKLTLSGILNFIDGLWSSC-GDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 345
+T + LSGILNF D + SSC DERI+VFT KE+IDPA+LRPGR+DVHI+ C
Sbjct: 299 STAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTA 358
Query: 346 FKVLASNYLGIKGKSHSLFGEIEGLIQS-TDVTPAEVAEELMKADDADV-ALEGLVNFLK 403
FK LA+NYLG+K H LF ++EG+ Q+ ++PAE+ E ++ ++ AL+ ++N L+
Sbjct: 359 FKTLANNYLGVK--EHKLFSQVEGIFQNGASLSPAEIGELMIANRNSPTRALKHVINALQ 416
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 90/210 (42%), Positives = 139/210 (66%)
Query: 80 ELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQLQWKFVCKEPQNNHS- 138
+ YL +KI+PD +L++++ KN + + +GE V+D ++ ++L+W+++ E +N +
Sbjct: 55 QAYLSSKISPDASKLRMTRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYL--EGRNKKTT 112
Query: 139 --GEK--------RYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKLYNRECPYX 188
GE+ + FELSF KKHK V+ Y+ +V +AK IK+E +++K+++ Y
Sbjct: 113 VVGEETEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKMHS----YS 168
Query: 189 XXXXXXXXXXMWGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRG 248
W S+ EHPSTF T+AM P+LK +++DLDRF++RK++Y+RVGKAWKR
Sbjct: 169 SYTLR------WQSVKFEHPSTFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRS 222
Query: 249 YLLYGPPGTGKSSLIAAMANYLSVEMKDRQ 278
Y LYGPPGTGKSSL+AAMANYL ++ D Q
Sbjct: 223 YFLYGPPGTGKSSLVAAMANYLKFDIYDLQ 252
Score = 302 (111.4 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 71/138 (51%), Positives = 89/138 (64%)
Query: 242 GKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQND-----GASVGSNTKLTLSGIL 296
G A R LL T SS++ SV++ R GA GS T LTLSG+L
Sbjct: 258 GDAQLRSLLL----ATNNSSILLVEDIDCSVDLPTRLQPATTTLGAPKGS-TPLTLSGLL 312
Query: 297 NFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGI 356
N IDGLWSSCGDERI++FTTN+KE +DPALLRPG MD+HI + +C+ GFK+LASNYLG+
Sbjct: 313 NCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYLGHCSFEGFKILASNYLGM 372
Query: 357 KGKS---HSLFGEIEGLI 371
S H L+ +I+ LI
Sbjct: 373 PHDSDDPHRLYPDIKRLI 390
Score = 143 (55.4 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 48/182 (26%), Positives = 94/182 (51%)
Query: 1 MFSLSEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNL 60
+FS ++P A T+FS Y++LAG +M+++ + +IP+ +++++ + ++ +P + L
Sbjct: 2 VFS-KDLPSPA-TMFSTYASLAGYIMMIKPMIHTIIPRPIQNFVFSYIKSFVGSPQAY-L 58
Query: 61 TLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQ 120
+ S +S DA++L + N L +S Q + KG E+ +
Sbjct: 59 S------SKISP----DASKLRMTRDPNNKNVNLHLS----QGEVVSDVYKGIELKWRYL 104
Query: 121 NVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERAKEIKQEEKVVKL 180
+ + V E + FELSF KKHK V+ Y+ +V +AK IK+E +++K+
Sbjct: 105 EGRNKKTTVVGEETEEAIVNWQCFELSFDKKHKDLVVKSYIAYVERKAKVIKEERRIIKM 164
Query: 181 YN 182
++
Sbjct: 165 HS 166
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 268 (99.4 bits), Expect = 5.4e-23, P = 5.4e-23
Identities = 59/181 (32%), Positives = 97/181 (53%)
Query: 49 YHY-LFNPLSNNLTLVFDEWSG--MSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNF 105
Y Y L +SN++ + F+E+SG + +++ FD YL TK RLK +++ + K+
Sbjct: 33 YIYKLMGWVSNSVHIKFNEYSGEGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSL 92
Query: 106 TVSIEKGEEVTDSFQNVQLQWKFVCKEPQNNHS-------GEKRYFELSFHKKHKQTVIC 158
+S++ E V D FQ V+++W +E QN S E+RY LSFH +H++ +
Sbjct: 93 VLSLDDHETVEDVFQGVKVKWSSSVRENQNQSSTNRDKGFAERRYLTLSFHSRHREMITT 152
Query: 159 YYLPHVVERAKEIKQEEKVVKLYNRECPYXXXXXXXXXXXMWGSINLEHPSTFDTLAMDP 218
YL HV+ KEI +++ KLY + W +++ +HP+T +T AMDP
Sbjct: 153 TYLDHVLREGKEIGLKKRERKLYTNNSSHEWISWRLGTN--WSNVSFDHPATLETFAMDP 210
Query: 219 E 219
E
Sbjct: 211 E 211
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 182 (69.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 40/105 (38%), Positives = 63/105 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R+N+ A+ N LT SG+LN IDGL SS D RI++ TTNH ER+ PAL+RPGR+D+ +
Sbjct: 349 RKNNSAA--GNDVLTFSGLLNAIDGLASS--DGRILMMTTNHLERLSPALIRPGRIDLKV 404
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEV 381
Y + H +++ + K H L I +++ ++ A++
Sbjct: 405 KFDYASNHQIELMFKRFFD--QKYHYLIDSINSKLENHQISTAQL 447
Score = 151 (58.2 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGK 259
W I ++ D++ +D + + +++DL F+ K++Y G ++RGYLLYGPPG+GK
Sbjct: 236 WECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGK 295
Query: 260 SSLIAAMA 267
+S I +MA
Sbjct: 296 TSFILSMA 303
Score = 41 (19.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 373 STDVTPAEVAEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEV 425
S D E+ ++ +K+ D D E + N +K + NN K ++ V
Sbjct: 478 SNDKITKEMLDDEIKSYDDDDEEESINNNIKLNKKYNSNGNNNYQKDDKKPSV 530
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 166 (63.5 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R+ G VG + +T SG+LN +DG+ SS DERII TTNH E++DPAL+RPGR+DV
Sbjct: 310 RERSG-EVGFHANVTFSGLLNALDGVTSS--DERIIFMTTNHPEKLDPALVRPGRVDVKA 366
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLI--QSTDVTPAE---VAEELMKADDA 391
+ T + + + + G S + ++ ++ ++T + + V + AD
Sbjct: 367 YLGNATPEQVREMFTRFYG---HSPEMADDLSDIVCPKNTSMASLQGLFVMNKSSPADAV 423
Query: 392 DVALE 396
D+A E
Sbjct: 424 DMAKE 428
Score = 147 (56.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 207 HPST---FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
HP + ++ ++ +K+MI DD+ FLR ++Y G ++RGYLLYGPPG+GK+S +
Sbjct: 200 HPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFL 259
Query: 264 AAMANYLSVEM 274
A+A L ++
Sbjct: 260 YALAGELDYDI 270
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 48/89 (53%), Positives = 61/89 (68%)
Query: 273 EMKDRQNDGASVGSNTK----LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
E KD +G K ++LSG+L F+DGLWS+ +ERII+FTTNHKE++DPA LR
Sbjct: 6 ENKDEGGNGEKQNKKKKNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLR 65
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIK 357
PG+MDVHI M YCT FK L + YL I+
Sbjct: 66 PGKMDVHILMDYCTPVVFKKLDALYLDIR 94
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 156 (60.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 281 GASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 340
G V ++LSG+LN IDG+ ++C + RI+V TTNH E++DPAL+RPGR+D+ I +
Sbjct: 413 GTGVFEKQGVSLSGLLNVIDGV-AAC-EGRILVMTTNHPEKLDPALVRPGRIDLSIAFGH 470
Query: 341 CTVHGFKVLASN-YLGIKG 358
T K L S Y ++G
Sbjct: 471 STTSDIKELFSAIYSTLEG 489
Score = 144 (55.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFL--RRKEFYRRVGKAWKRGYLLYGPPGT 257
W P T+ +D K +DD+ +L R + +Y G ++RGYLL+GPPGT
Sbjct: 262 WSRCMARAPRALSTVVLDKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGT 321
Query: 258 GKSSLIAAMANYLSVEM 274
GK+SL A A L +E+
Sbjct: 322 GKTSLCFAAAGLLGLEL 338
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 149 (57.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
++ +D ++I+ D+ +FL ++Y G ++RGYLLYGPPGTGKSS I A+A L +
Sbjct: 208 SVILDKGKSELIIQDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQL 267
Query: 273 EMKDRQNDGASVGSNTKL 290
+ G SV S+T L
Sbjct: 268 SICILNLAGKSV-SDTSL 284
Score = 143 (55.4 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 279 NDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 338
N S G + LT SG+LN +DG+ +S G RI+ TTNH E++D L+RPGR+D+ I +
Sbjct: 338 NPSVSSGGSA-LTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEI 394
Query: 339 SYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADV-ALEG 397
C+ + + + +L L + +++ +PA++ M + + A+
Sbjct: 395 GLCSSYQMEQM---FLKFYPTDFDLAKQFVEKLENYKFSPAQLQAYFMTYSNNSIEAINN 451
Query: 398 LVNFLKR 404
L +K+
Sbjct: 452 LNELIKK 458
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 152 (58.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
T D++ +D +K+ I++D+ FL + +Y G ++RGYLLYGPPGTGKSS I A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 270 LSVEM 274
L ++
Sbjct: 308 LDYDI 312
Score = 135 (52.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 285 GSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCT 342
G+N +T SG+LN +DG+ S+ +ERI+ TTNH ER+D AL+RPGR+D+ + + T
Sbjct: 363 GAN--VTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDMTVRIGELT 416
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 156 (60.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 41/123 (33%), Positives = 71/123 (57%)
Query: 267 ANYLSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPAL 326
A ++S E +Q A G N ++T SG+LN +DG+ S+ + RI+ TTN+ +R+DPAL
Sbjct: 287 AAFVSREATPQQKS-AFDGLN-RITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPAL 342
Query: 327 LRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSL-FGE-IEGLIQSTDVTPAEVAEE 384
+RPGR+D+ + YCT + + + N+ + + FG+ + +S +PA++
Sbjct: 343 VRPGRIDLKEYIGYCTQYQLEEMFKNFFASSDTTKAEEFGKRVNSFGRSA--SPAQIQGF 400
Query: 385 LMK 387
MK
Sbjct: 401 FMK 403
Score = 126 (49.4 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ +D Q I+ D F++ +Y + G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 191 SVVLDRGTSQRIIADCQDFIKSSLWYTQRGIPYRRGYLLYGPPGCGKSSFITALAGEL 248
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 153 (58.9 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 44/128 (34%), Positives = 70/128 (54%)
Query: 267 ANYLSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPAL 326
A ++S E+ +N A G +LT SG+LN +DG+ SS + RI+ TTN ER+DPAL
Sbjct: 286 AAFVSRELLPTENPLAYQGMG-RLTFSGLLNALDGVASS--EARIVFMTTNFIERLDPAL 342
Query: 327 LRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHS-LFGEIEGLIQSTDVTPAEVAEEL 385
+RPGR+D+ + +C+ + + + + + F E + L TD++ A+V
Sbjct: 343 VRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSE-QALAAHTDLSAAQVQGHF 401
Query: 386 M--KADDA 391
M K D A
Sbjct: 402 MLYKTDPA 409
Score = 128 (50.1 bits), Expect = 6.4e-17, Sum P(2) = 6.4e-17
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ ++ + + I+DD+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 190 SVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 152 (58.6 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 270 LSVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRP 329
+ V +RQ S +T SG+LN +DG+ + G++RI TTN+ ER+DPAL+RP
Sbjct: 333 VDVAFGNRQEMSPDGYSGATVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRP 390
Query: 330 GRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKAD 389
GR+DV + + T L S + G S S + AE AE M
Sbjct: 391 GRVDVKVRVGEATPEQAAELWSRFYGDVDTSGSGRERFIAKLYKLGFF-AEPAEGRMTLR 449
Query: 390 DADVALEGLVNFLKRK 405
+ A++GL FL K
Sbjct: 450 VSAAAIQGL--FLTNK 463
Score = 130 (50.8 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 200 WGSINL-EHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTG 258
W + L ++ + LK+ I++D+ FL R ++Y G ++R YLL+GPPG+G
Sbjct: 225 WAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYLLHGPPGSG 284
Query: 259 KSSLIAAMANYLSVEM 274
KSS I A+A L +
Sbjct: 285 KSSFIHALAGELDYNL 300
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 143 (55.4 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 274 MKDRQNDGASVGSN--TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGR 331
MK R GA V ++ T ++LS +LN IDG+ S G RI++ TTN + +DPAL+RPGR
Sbjct: 339 MKKRARPGAPVPTSPPTPISLSALLNAIDGVSSQEG--RILIMTTNAPQDLDPALIRPGR 396
Query: 332 MDVHI 336
+D+HI
Sbjct: 397 VDMHI 401
Score = 137 (53.3 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRR--KEFYRRVGKAWKRGYLLYGPPGT 257
W I T+ +D K+ +LDD+ +LR +++Y G ++RGYL GPPGT
Sbjct: 204 WNRITTRPSRAISTVILDSCKKKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGT 263
Query: 258 GKSSLIAAMANYLSVEM 274
GK+SL +A+A +++
Sbjct: 264 GKTSLSSALAGVFGLDI 280
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 148 (57.2 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 272 VEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGR 331
V +D ++ + +++T SG+LN +DG+ +C +ER+ TTN+ ER+DPAL+RPGR
Sbjct: 309 VSREDPMSNHPAYQGLSRVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGR 366
Query: 332 MDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGE--IEGLIQ-STDVTPAEVAEE-LMK 387
+D T + S + + S S+ + ++ + + T+++PA + LM
Sbjct: 367 VDRKQYFGNATDGMLSKMFSRFY--RQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMY 424
Query: 388 ADDADVALEGLVNFLK 403
D AL+ + N K
Sbjct: 425 KQDPRAALDNIKNMFK 440
Score = 129 (50.5 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
+++ +D + + +++D F+ +Y G ++RGYL YGPPGTGKSS I+A+A++
Sbjct: 209 ESVILDGRICEELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASH 266
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 158 (60.7 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 40/107 (37%), Positives = 64/107 (59%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + YC+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHWQLTQ 363
Query: 349 LASNYLGIKGKSHSLFGEIEG-LIQ-STDVTPAEVAEELM--KADDA 391
+ + G++ SL G ++Q +T ++PA+V M K D A
Sbjct: 364 MFQRFY--PGQAPSLAEAFAGRVLQVTTQISPAQVQGYFMLYKNDPA 408
Score = 117 (46.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 197 LADRIVRDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 145 (56.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 275 KDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDV 334
+++ ND G N +T SG+LN +DG+ S+ +E I TTNH E++DPALLRPGR+D
Sbjct: 315 REQTNDQ---GFNNGVTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRPGRVDY 369
Query: 335 HINMSYCTVHGFK 347
+ + T H K
Sbjct: 370 KVMIDNATEHQVK 382
Score = 132 (51.5 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ +D + + I++D+ FL E+Y + G ++RGYLLYGPPG+GK+S I A+A L
Sbjct: 214 SVILDEGIAENIVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGEL 271
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 151 (58.2 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 35/95 (36%), Positives = 60/95 (63%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + YC+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 349 LASNYLGIKGKSHSLFGEI-EGLIQSTD-VTPAEV 381
+ + G++ SL E ++++T ++PA+V
Sbjct: 364 MFQRFY--PGQAPSLAENFAEHVLKATSQISPAQV 396
Score = 124 (48.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
D++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 153 (58.9 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 35/95 (36%), Positives = 61/95 (64%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + YC+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 349 LASNYLGIKGKSHSLFGEI-EGLIQSTD-VTPAEV 381
+ + G++ SL E ++++T+ ++PA+V
Sbjct: 364 MFQRFY--PGQAPSLAENFAEHVLRATNQISPAQV 396
Score = 121 (47.7 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 147 (56.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 34/95 (35%), Positives = 61/95 (64%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTN+ +R+DPAL+RPGR+D+ + YC+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 363
Query: 349 LASNYLGIKGKSHSLFGEI-EGLIQST-DVTPAEV 381
+ + G++ SL E ++++T +++PA+V
Sbjct: 364 MFQRFY--PGQAPSLAENFAEHVLKATSEISPAQV 396
Score = 124 (48.7 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
D++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 DSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 148 (57.2 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 35/96 (36%), Positives = 59/96 (61%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + +C+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQLTQ 363
Query: 349 LASNYLGIKGKSHSL---FGEIEGLIQSTDVTPAEV 381
+ + G++ SL F + L +T ++PA+V
Sbjct: 364 MFQRFY--PGQAPSLAESFAD-RALQATTQISPAQV 396
Score = 122 (48.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ ++ L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLEQGLADRIVRDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 144 (55.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 35/120 (29%), Positives = 64/120 (53%)
Query: 269 YLSVEMKDRQNDGASVGSNTKLTL-------SGILNFIDGLWSSCGDERIIVFTTNHKER 321
Y + + N G+N T+ SG+LN +DG+ ++ +ERII TTN+ E+
Sbjct: 324 YTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEK 381
Query: 322 IDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEV 381
+ P L+RPGR+D+ I + Y ++ +K + +L + H L + + Q +++ AE+
Sbjct: 382 LPPTLIRPGRVDMKILIPYANIYQYKKM---FLRFFPEHHELSNKFAKIFQDFNLSMAEI 438
Score = 128 (50.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 204 NLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
N ++ +++ + L + I++D+ FL ++Y G ++R YLL+GPPG GKSSLI
Sbjct: 209 NPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLI 268
Query: 264 AAMANY 269
A+A Y
Sbjct: 269 TALAGY 274
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 144 (55.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 35/120 (29%), Positives = 64/120 (53%)
Query: 269 YLSVEMKDRQNDGASVGSNTKLTL-------SGILNFIDGLWSSCGDERIIVFTTNHKER 321
Y + + N G+N T+ SG+LN +DG+ ++ +ERII TTN+ E+
Sbjct: 324 YTNNDQNSSSNSSIFTGTNNHSTIKTLGVSYSGLLNALDGIVAT--EERIIFMTTNNIEK 381
Query: 322 IDPALLRPGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEV 381
+ P L+RPGR+D+ I + Y ++ +K + +L + H L + + Q +++ AE+
Sbjct: 382 LPPTLIRPGRVDMKILIPYANIYQYKKM---FLRFFPEHHELSNKFAKIFQDFNLSMAEI 438
Score = 128 (50.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 204 NLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
N ++ +++ + L + I++D+ FL ++Y G ++R YLL+GPPG GKSSLI
Sbjct: 209 NPKNKRPINSVILPENLNEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLI 268
Query: 264 AAMANY 269
A+A Y
Sbjct: 269 TALAGY 274
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 148 (57.2 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 38/107 (35%), Positives = 64/107 (59%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + +C+
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQ 363
Query: 349 LASNYLGIKGKSHSLFGEI-EGLIQST-DVTPAEVAEELM--KADDA 391
+ + G++ SL + ++Q+T ++PA+V M K D A
Sbjct: 364 MFQRFY--PGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPA 408
Score = 119 (46.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ ++ + + I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 NSVVLEQGVTERIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 139 (54.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
+ ++ + +LK +++D+ F+ + +YR G ++RGYLLYG PG GKSSLI A+A
Sbjct: 185 SLSSVILADDLKSKLIEDIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGE 244
Query: 270 LSVEM 274
L++++
Sbjct: 245 LNLDI 249
Score = 128 (50.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 276 DRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVH 335
D N+ ++ +N LT SG+LN +DG+ S G RI+ TTN E +D AL+R GR+D+
Sbjct: 294 DSNNNNSN--NNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLK 349
Query: 336 INMSYCT--------VHGFKVLASNYLGIKGKS----HSL-FGEIEGLIQSTDVTPAEVA 382
I +S T H + + N L I+ H L +I+G + +P +
Sbjct: 350 IKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLKYINSPEKAI 409
Query: 383 EEL 385
EE+
Sbjct: 410 EEV 412
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 136 (52.9 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ +D +K+ ILDD+ F++ ++Y G ++RGYLLYGPPG+GK+S I A+A L
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGEL 284
Score = 128 (50.1 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 276 DRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVH 335
++++ G ++ +T SG+LN +DG+ SS +E I TTNH E++D A++RPGR+D
Sbjct: 326 NKRSQTGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPEKLDAAIMRPGRIDYK 383
Query: 336 INMSYCT 342
+ + T
Sbjct: 384 VFVGNAT 390
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 135 (52.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 38/117 (32%), Positives = 64/117 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGF-K 347
+LT SG+LN +DG+ S+ + RI+ TTN+ +R+DPAL+RPGR+D+ + +C+ +
Sbjct: 306 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLAR 363
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM--KADDADVALEGLVNFL 402
+ Y + F E + L S ++ A+V M K D A+E + + L
Sbjct: 364 MFQRFYPEQPPAAAERFAE-QALAVSKQISAAQVQGHFMLYKTDPGG-AIENIHSIL 418
Score = 123 (48.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
++ ++ + + +++D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 190 SVVLEKGVSERLVEDVKEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGEL 247
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 135 (52.6 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 38/117 (32%), Positives = 64/117 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGF-K 347
+LT SG+LN +DG+ S+ + RI+ TTN+ +R+DPAL+RPGR+D+ + +C+ +
Sbjct: 307 RLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQLAR 364
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELM--KADDADVALEGLVNFL 402
+ Y + F E + L S ++ A+V M K D A+E + + L
Sbjct: 365 MFQRFYPEQPPAAAERFAE-QALAVSKQISAAQVQGHFMLYKTDPGG-AIENIHSIL 419
Score = 122 (48.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 213 TLAMDPELKQMILDDLDRFLRRKEFYRRVGKA-WKRGYLLYGPPGTGKSSLIAAMANYL 270
++ ++ + + +++D+ F+ ++Y GKA +RGYLLYGPPG GKSS I A+A L
Sbjct: 190 SVVLEKGVSERLVEDVKEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGEL 248
>TAIR|locus:2115944 [details] [associations]
symbol:AT4G05370 "AT4G05370" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161503
InterPro:IPR025753 Pfam:PF14363 EMBL:BT029322 IPI:IPI00544016
PIR:E85067 RefSeq:NP_192446.1 UniGene:At.51016 PRIDE:Q9M0V8
DNASU:825885 EnsemblPlants:AT4G05370.1 GeneID:825885
KEGG:ath:AT4G05370 TAIR:At4g05370 eggNOG:NOG243159
HOGENOM:HOG000153210 OMA:IIDEFEG PhylomeDB:Q9M0V8
ProtClustDB:CLSN2915942 ArrayExpress:Q9M0V8 Genevestigator:Q9M0V8
Uniprot:Q9M0V8
Length = 149
Score = 165 (63.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 5 SEIPQTASTLFSAYSTLAGSMMLLRSFANELIPQQLRSYLCTTFYHYLFNPLSNNLTLVF 64
++IP + S +FS Y++L+ +L ++ E IP +R ++ + F Y L++N T +
Sbjct: 7 TKIP-SLSAIFSVYTSLSAFTILFKTILYEFIPVNIRDFIISKFTDYFSFYLNSNFTFII 65
Query: 65 DEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVSIEKG----EEVTDSFQ 120
+E S NQ F AA++YL T ++ T R + +S KN + G ++ D F+
Sbjct: 66 EEQSDYVMNQTFRAAQVYLPTLLSRITTRSLLVSSSDLKNPMAKPKFGIPVKAKIIDEFE 125
Query: 121 NVQLQWKFVCKEPQNN--HSGEKR 142
++L+W + + +N S +KR
Sbjct: 126 GIRLEWTLLSAKDNDNPYQSKQKR 149
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 129 (50.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRKE--FYRRVGKAWKRGYLLYGPPGT 257
W + T+ +D E K +L D++ +L+ K +Y G +RGYL +GPPGT
Sbjct: 258 WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGT 317
Query: 258 GKSSLIAAMANYLSVEM 274
GK+SL A+A +E+
Sbjct: 318 GKTSLSFALAGVFGLEI 334
Score = 106 (42.4 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 281 GASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
G G + K +++SG+LN IDG+ + G RI + TTN E +D AL+R GR+D+ +
Sbjct: 403 GRGHGDDQKGISMSGLLNVIDGVAAHEG--RIFIMTTNKPEILDEALIRSGRVDLQV 457
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 153 (58.9 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 35/95 (36%), Positives = 61/95 (64%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
+LT SG+LN +DG+ S+ + RI+ TTNH +R+DPAL+RPGR+D+ + YC+
Sbjct: 88 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQ 145
Query: 349 LASNYLGIKGKSHSLFGEI-EGLIQSTD-VTPAEV 381
+ + G++ SL E ++++T+ ++PA+V
Sbjct: 146 MFQRFY--PGQAPSLAENFAEHVLRATNQISPAQV 178
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 97 (39.2 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 245 WKRGYLLYGPPGTGKSSLIAAMANYL 270
++RGYLLYGPPG GKSS I A+A L
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGEL 29
Score = 78 (32.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKER 321
+LT SG+LN +DG+ S+ + RI+ TTNH +R
Sbjct: 88 RLTFSGLLNALDGVAST--EARIVFMTTNHVDR 118
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 139 (54.0 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 209 STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
+++D + +DP +KQ ++DD F + + Y ++ WKRG + YGPPG GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 269 YLSVEMKD 276
L ++KD
Sbjct: 250 ML-YKLKD 256
Score = 74 (31.1 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 293 SGILNFIDGLWSSCGDERIIVFTTNHKERIDPALL-RPGRMD 333
S LN +DGL ++ D ++ +TNH ER+DP + RP R D
Sbjct: 306 SYFLNEVDGLKNN--DGIFMIGSTNHLERLDPGISKRPSRFD 345
Score = 43 (20.2 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 7 IPQTASTLFSAYSTLAGSMML--LRSFANELIPQQL 40
+P + LF+ Y+ AG+ L ++ ANEL+P L
Sbjct: 49 VPAQTTNLFT-YAQ-AGNAKLTPIQDEANELLPSSL 82
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 117 (46.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 52/167 (31%), Positives = 79/167 (47%)
Query: 281 GASVGSNTKL--TLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALLRPGRMDVHIN 337
G GSN + TL+ +L +DG SS E I+VF TN + +DPALLRPGR D I
Sbjct: 407 GGQFGSNDERESTLNQLLVEMDGFTSS---EHIVVFAGTNRPDVLDPALLRPGRFDRQIT 463
Query: 338 MSYCTVHGFKVLASNYLG-IKGKSH-SLFGEIEGLIQS--TDVTPAEVAEE--LMKADDA 391
+ + G + + +L IK + L + ++ S T V E L+ A
Sbjct: 464 IDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSN 523
Query: 392 DVALEGLVNFLKR-KRIQAD-ESKNNDVKGEEANEVEHEKAKQLKTG 436
++ +V+F + +R+ A E K+ + EE N V H +A G
Sbjct: 524 SNEVQ-MVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAG 569
Score = 107 (42.7 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D E K+ I++ + +FL+ +FY R+G RG +L GPPGTGK+ L A A +
Sbjct: 297 DVAGVD-EAKEEIMEFV-KFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 354
Query: 272 V 272
V
Sbjct: 355 V 355
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 115 (45.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 280 DGASVGSN-TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 338
D +S G + TL +LN +DG + S GD +II+ TN + +DPAL+RPGR+D I +
Sbjct: 294 DTSSRGEQEVQRTLLELLNQLDG-FESRGDVKIIM-ATNRIDSLDPALIRPGRIDRKIEL 351
Query: 339 ---------SYCTVH--GFKVL-ASNYLGIKGKSHSLFG-EIEGLIQSTDVTPAEVAEEL 385
T+H G + A Y + GK S+ G EI+ + + +
Sbjct: 352 PKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKC 411
Query: 386 MKADDADVALEGLV 399
+ DD + A++ ++
Sbjct: 412 VGTDDFEKAVKSVM 425
Score = 96 (38.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD + Q + + ++ L E+Y +G +G +LYG PGTGK+ L A+AN
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 270 LS 271
S
Sbjct: 241 TS 242
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 113 (44.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 41/154 (26%), Positives = 77/154 (50%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + G +II+ TN + +DPALLRPGR+D I
Sbjct: 241 RFSEGTSADREIQRTLMELLNQMDG-FDYLGQTKIIM-ATNRPDTLDPALLRPGRLDRKI 298
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTP-AEVAEELMKADDADVAL 395
+ G + +L K + + E L++ TD T A++ + +A +A+
Sbjct: 299 EIPLPNEVGRMEILKIHLEKVSKQGEI--DYEALVKLTDGTNGADLRNVVTEA--GFIAI 354
Query: 396 EGLVNFLKRKRIQADESKNNDVKGEEANEVEHEK 429
+ +++ + + + K D+K E ++++K
Sbjct: 355 KEDRDYVIQSDLMSAARKVADLKKLEGT-IDYQK 387
Score = 96 (38.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
EL+++I +L L+ E + RVG +G LLYGPPGTGK+ L A+A L V
Sbjct: 143 ELREVI--ELP--LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGV 192
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 106 (42.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + +D ++K+ I + ++ ++ E + +G A +G +LYGPPGTGK+ L A+A
Sbjct: 141 STYDMVGGLDKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 268 NY 269
++
Sbjct: 200 HH 201
Score = 103 (41.3 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 338
+G+S G S + T+ +LN +DG SS D +II+ TN + +DPALLRPGR+D I
Sbjct: 255 EGSSGGDSEVQRTMLELLNQLDGFESS-KDIKIIM-ATNRLDILDPALLRPGRIDRKIEF 312
Query: 339 SYCTV 343
TV
Sbjct: 313 PAPTV 317
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 107 (42.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E KQ ++ ++ FL++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 270 LSV 272
V
Sbjct: 284 AGV 286
Score = 102 (41.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 272 VEMKDRQNDGASVGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ G +G + TL+ +L +DG + G I+V TN + +D ALLR
Sbjct: 328 IDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLR 384
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKA 388
PGR D +++ V G + + G K + + EI + ++ + A++A L +A
Sbjct: 385 PGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAM-RTPGFSGADLANLLNEA 443
Query: 389 DDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKAKQL 433
A +A + K I D+S + V G E + K+K L
Sbjct: 444 --AILAGRRARTSISSKEI--DDSIDRIVAGMEGTVMTDGKSKSL 484
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 111 (44.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG G I++ TN + +DPALLR
Sbjct: 264 IDAVGRQR-GAGLGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLR 320
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMK 387
PGR D I +S + G + + + KGK + +++GL + T +T A++A + +
Sbjct: 321 PGRFDRQIPVSNPDLAGRRAVLRVHS--KGKPMAADADLDGLAKRTVGMTGADLANVINE 378
Query: 388 A 388
A
Sbjct: 379 A 379
Score = 98 (39.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 209 STF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
+TF D +D ++++ ++ FL+ Y+ +G +G LLYGPPGTGK+ L A+A
Sbjct: 160 TTFADVAGVDEAVEELY--EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 268 NYLSV 272
V
Sbjct: 218 GEAGV 222
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 105 (42.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + G +II+ TN + +DPALLR GR+D I
Sbjct: 246 RFSEGTSADREIQRTLMELLNQLDG-FDYLGKTKIIM-ATNRPDTLDPALLRAGRLDRKI 303
Query: 337 NMSYCTVHG-FKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVAL 395
+ G ++L K HS ++EG I V ++++ L AD +V
Sbjct: 304 EIPLPNEVGRLEIL---------KIHSSTVQMEGDIDFESVV--KMSDGLNGADLRNVVT 352
Query: 396 EGLVNFLK--RKRIQADESKNNDVKGEEANEVE 426
E + +K R I D+ K EA ++E
Sbjct: 353 EAGLFAIKDYRDAINQDDFNRAVRKVAEAKKLE 385
Score = 96 (38.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
EL+++I +L L+ E ++RVG +G LLYGPPGTGK+ L A+A+
Sbjct: 148 ELREVI--ELP--LKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 113 (44.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + +D ++K+ I + ++ L+ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 129 STYDMIGGLDQQIKE-IKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 268 NY 269
++
Sbjct: 188 HH 189
Score = 87 (35.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
D A G S + T+ +LN +DG + + I+ TN + +DPALLRPGR+D
Sbjct: 243 DSAGSGDSEVQRTMLELLNQLDGFEPTKNIK--IIMATNRLDILDPALLRPGRID 295
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 106 (42.4 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 208 PSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
P F+ +A E K +L+ +D F++ +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 268 NYLSV 272
+V
Sbjct: 204 TEANV 208
Score = 79 (32.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 350
TL+ +L +DG ++ +++ TN + +D ALLRPGR D + + ++G K +
Sbjct: 273 TLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKIL 330
Query: 351 SNYLGIKGKSHSLFGEIEGLIQST 374
Y+ K KS +IE + + T
Sbjct: 331 EIYIK-KIKSDLKLEDIEKIARLT 353
Score = 66 (28.3 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 367 IEGLIQSTDVTPAEVAEEL--MKAD-DADVALEGLVN---FLKRKRIQADESKNNDVKGE 420
+E QS D T + E L MK D D + +G VN F+KRK + D+ D+ G+
Sbjct: 635 VEQNYQSHDHTLVKNEENLNNMKNDIDDNNTRDGQVNSDSFVKRKEV-TDQ----DINGK 689
Query: 421 EANEVEHEKAKQLK 434
E +E+++++ K+ K
Sbjct: 690 ELSEMDNKEIKENK 703
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 14/68 (20%), Positives = 32/68 (47%)
Query: 368 EGLIQSTDVTPAEV-AEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVE 426
+ ++ +VT ++ +EL + D+ ++ ++ + +I D K D+K ++
Sbjct: 673 DSFVKRKEVTDQDINGKELSEMDNKEIKENKKLDGEELNKIIIDNDKMGDMKKNIKEVIK 732
Query: 427 HEKAKQLK 434
K KQ K
Sbjct: 733 KMKKKQSK 740
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 106 (42.4 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 208 PSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
P F+ +A E K +L+ +D F++ +E Y +G +G LL GPPG+GK+ L A+A
Sbjct: 145 PIRFEEIAGIDESKLELLEVVD-FIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVA 203
Query: 268 NYLSV 272
+V
Sbjct: 204 TEANV 208
Score = 79 (32.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 25/84 (29%), Positives = 44/84 (52%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 350
TL+ +L +DG ++ +++ TN + +D ALLRPGR D + + ++G K +
Sbjct: 273 TLNQLLVEMDGFSNTV--HIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKIL 330
Query: 351 SNYLGIKGKSHSLFGEIEGLIQST 374
Y+ K KS +IE + + T
Sbjct: 331 EIYIK-KIKSDLKLEDIEKIARLT 353
Score = 66 (28.3 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 367 IEGLIQSTDVTPAEVAEEL--MKAD-DADVALEGLVN---FLKRKRIQADESKNNDVKGE 420
+E QS D T + E L MK D D + +G VN F+KRK + D+ D+ G+
Sbjct: 635 VEQNYQSHDHTLVKNEENLNNMKNDIDDNNTRDGQVNSDSFVKRKEV-TDQ----DINGK 689
Query: 421 EANEVEHEKAKQLK 434
E +E+++++ K+ K
Sbjct: 690 ELSEMDNKEIKENK 703
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 14/68 (20%), Positives = 32/68 (47%)
Query: 368 EGLIQSTDVTPAEV-AEELMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVE 426
+ ++ +VT ++ +EL + D+ ++ ++ + +I D K D+K ++
Sbjct: 673 DSFVKRKEVTDQDINGKELSEMDNKEIKENKKLDGEELNKIIIDNDKMGDMKKNIKEVIK 732
Query: 427 HEKAKQLK 434
K KQ K
Sbjct: 733 KMKKKQSK 740
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 103 (41.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R + G S + TL +LN +DG + G+ +II+ TN + +DPAL+RPGR+D I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKI 303
Query: 337 NM 338
+
Sbjct: 304 EI 305
Score = 97 (39.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 238 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Y+RVG +G LLYGPPGTGK+ L AMA+ ++
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNIN 196
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 103 (41.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R + G S + TL +LN +DG + G+ +II+ TN + +DPAL+RPGR+D I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDG-FEELGNVKIIM-ATNRPDVLDPALVRPGRLDRKI 303
Query: 337 NM 338
+
Sbjct: 304 EI 305
Score = 97 (39.2 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 238 YRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Y+RVG +G LLYGPPGTGK+ L AMA+ ++
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMASNIN 196
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 101 (40.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 113 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 171
Score = 98 (39.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 220 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 275
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 107 (42.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + S G ++I+ TN + +DPALLRPGR+D I
Sbjct: 250 RFSEGTSADREIQRTLMELLNQMDG-FDSLGQVKMIM-ATNRPDSLDPALLRPGRLDRKI 307
Query: 337 NM 338
+
Sbjct: 308 EI 309
Score = 92 (37.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E + RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 152 ELREVI--ELP--LLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQL 199
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 109 (43.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + S G ++I+ TN + +DPALLRPGR+D I
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKI 316
Query: 337 NM 338
+
Sbjct: 317 EI 318
Score = 90 (36.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
E ++RVG +G LL+GPPGTGK+ L A+A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 109 (43.4 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + S G ++I+ TN + +DPALLRPGR+D I
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDG-FDSLGKVKVIM-ATNRPDTLDPALLRPGRLDRKI 316
Query: 337 NM 338
+
Sbjct: 317 EI 318
Score = 90 (36.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
E ++RVG +G LL+GPPGTGK+ L A+A+ L
Sbjct: 174 ELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 102 (41.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 185 DIGGLDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Score = 98 (39.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 101 (40.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R ++G S + TL +L +DG + + G +II+ TN + +DPALLRPGR+D
Sbjct: 290 RFSEGTSADREIQRTLMELLTQMDG-FDNLGQTKIIM-ATNRPDTLDPALLRPGRLD 344
Score = 99 (39.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
TFD + E + + + ++ L+ E ++RVG +G LLYGPPGTGK+ L A+A
Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 101 (40.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 184 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 242
Score = 98 (39.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 291 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 346
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 185 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 243
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 292 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 347
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 101 (40.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTS 244
Score = 98 (39.6 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 107 (42.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E KQ ++ ++ FL++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVE-FLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 270 LSV 272
V
Sbjct: 277 AGV 279
Score = 96 (38.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 272 VEMKDRQNDGASVGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ G +G + TL+ +L +DG + G I+V TN + +D ALLR
Sbjct: 321 IDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLR 377
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKA 388
PGR D +++ V G + + G K + E+ + ++ + A++A L +A
Sbjct: 378 PGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAM-RTPGFSGADLANLLNEA 436
Query: 389 DDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKAKQL 433
A +A + K I D+S + V G E + K+K L
Sbjct: 437 --AILAGRRGKTAISSKEI--DDSIDRIVAGMEGTVMTDGKSKSL 477
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 102 (41.0 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 281 GASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
GA +G + TL+ +L+ +DG S DE I++ TN + +DPALLRPGR D H+
Sbjct: 284 GAGLGGGHDEREQTLNQLLSEMDGFDSH--DEVIVMAATNRPDVLDPALLRPGRFDRHV 340
Score = 100 (40.3 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E +M L ++ +LR + ++R+G +G LL GPPGTGK+ L A+A
Sbjct: 173 TFDDVA-GMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 270 LSV 272
V
Sbjct: 232 ADV 234
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 106 (42.4 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 204 NLEHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL 262
N++ P+ TF +A E KQ + ++ FL+ +E ++ +G +G LL GPPGTGK+ L
Sbjct: 150 NMDKPTITFANVAGVDEAKQEV-GEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLL 208
Query: 263 IAAMANYLSV 272
A+A V
Sbjct: 209 AKAIAGEAGV 218
Score = 93 (37.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ IL +DG I++ TN + +DPALLR
Sbjct: 260 IDAVGRQR-GAGLGGGHDEREQTLNQILVEMDGF--DTDTSVIVIAATNRPDILDPALLR 316
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMK 387
PGR D + + + G + + + KGK + +E L + T + A++A L +
Sbjct: 317 PGRFDRRVVLDKPDITGREAILK--IHAKGKPLADTVNLENLAKQTVGFSGADLANLLNE 374
Query: 388 A 388
A
Sbjct: 375 A 375
Score = 42 (19.8 bits), Expect = 9.1e-08, Sum P(3) = 9.1e-08
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 73 NQVFDAAELYLRTKINPDTERLKVSKT-----SRQKNFTVSIE--KGEEVTDSFQNVQ 123
+Q+ ++ + +I D+E ++V+ T S K + SI +G ++TD N+Q
Sbjct: 43 SQIITLSQEHKIAEITVDSENIEVTTTDGTKLSTVKEYIASIYDIEGLDLTDVKVNIQ 100
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 268 NY 269
++
Sbjct: 217 HH 218
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 277 RQNDGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R G+ G S + T+ +LN +DG +S ++ ++ TN + +D ALLRPGR+D
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 159 YYLPHVVERAKEIKQE 174
YYL H+ E ++++Q+
Sbjct: 35 YYLQHIHELQRQLRQK 50
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 48/167 (28%), Positives = 85/167 (50%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG S+ G II+ TN + +DPALLR
Sbjct: 259 IDAVGRQR-GAGLGGGHDEREQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLR 315
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVAEELMK 387
PGR D HI + ++G K + + +KGK +++ L + T T A++A + +
Sbjct: 316 PGRFDRHIVVDTPDINGRKEILKVH--VKGKPLGDDVDLDVLARRTPGFTGADLANMVNE 373
Query: 388 ADDADVALEGLVNFLKRKRIQADESKNNDVKG-EEANEVEHEKAKQL 433
A A +A + + ++ E+ + G E+ ++V E+ K+L
Sbjct: 374 A--ALLAARRNKKVINMEEME--EAIERVIAGPEKKSKVISEREKRL 416
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF +A E+K+ + + ++ FL+ Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 270 LSV 272
V
Sbjct: 215 AGV 217
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 48/167 (28%), Positives = 85/167 (50%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG S+ G II+ TN + +DPALLR
Sbjct: 259 IDAVGRQR-GAGLGGGHDEREQTLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLR 315
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVAEELMK 387
PGR D HI + ++G K + + +KGK +++ L + T T A++A + +
Sbjct: 316 PGRFDRHIVVDTPDINGRKEILKVH--VKGKPLGDDVDLDVLARRTPGFTGADLANMVNE 373
Query: 388 ADDADVALEGLVNFLKRKRIQADESKNNDVKG-EEANEVEHEKAKQL 433
A A +A + + ++ E+ + G E+ ++V E+ K+L
Sbjct: 374 A--ALLAARRNKKVINMEEME--EAIERVIAGPEKKSKVISEREKRL 416
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF +A E+K+ + + ++ FL+ Y +G +G LL+G PGTGK+ L A+A
Sbjct: 156 TFADVAGIDEVKEELAEIVE-FLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 270 LSV 272
V
Sbjct: 215 AGV 217
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 142 STYDMVGGLDKQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 268 NY 269
++
Sbjct: 201 HH 202
Score = 86 (35.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 277 RQNDGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R G+ G S + T+ +LN +DG S+ + ++ TN + +DPALLRPGR+D
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFESTKNIK--VLMCTNRIDILDPALLRPGRID 309
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 100 (40.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 234 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 290
Query: 334 VHINM 338
+HI++
Sbjct: 291 IHIDL 295
Score = 95 (38.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 136 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 183
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI++
Sbjct: 299 IHIDL 303
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 100 (40.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 248 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 304
Query: 334 VHINM 338
+HI++
Sbjct: 305 IHIDL 309
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 150 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 197
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 100 (40.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 312
Query: 334 VHINM 338
+HI++
Sbjct: 313 IHIDL 317
Score = 95 (38.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 158 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 100 (40.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 312
Query: 334 VHINM 338
+HI++
Sbjct: 313 IHIDL 317
Score = 95 (38.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 158 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 100 (40.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 312
Query: 334 VHINM 338
+HI++
Sbjct: 313 IHIDL 317
Score = 95 (38.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 158 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 141 (54.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFL--RRKEFYRRVGKAWKRGYLLYGPPGT 257
W S L T+ D ++K+ ++ D+ +L ++FY + G ++RGYLL+GPPGT
Sbjct: 242 WDSTILRPTRPIQTVHFDEQVKKDLIADIINYLDPHTRDFYHQRGIPYRRGYLLHGPPGT 301
Query: 258 GKSSLIAAMANYLSVEM 274
GK+SL A+A+ +E+
Sbjct: 302 GKTSLSLALASMFKLEL 318
Score = 123 (48.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 256 GTGKSSLIAAMANYLSVEMKDRQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVF 314
G + + +AA L + D ++ GS + TLSG+LN +DG+ S G RI+
Sbjct: 354 GIPRRNELAARMTGLDDKDDDEDDEDEENGSGRGRSTLSGLLNVLDGVASQEG--RIVFM 411
Query: 315 TTNHKERIDPALLRPGRMD 333
T+N +++DPAL+RPGR+D
Sbjct: 412 TSNLADKLDPALVRPGRID 430
Score = 57 (25.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 366 EIEGLIQSTDVTPAEVAEELMK-ADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANE 424
E I VTPA + L+ D A +G+ +F+K + ++ +E++ ++ E +
Sbjct: 505 EFASHIPDDAVTPALIQGFLLSHRSDPLAARDGIQDFIKDEMLKLEEAREKALRARET-K 563
Query: 425 VEHEKAKQL 433
K+K L
Sbjct: 564 ARKRKSKAL 572
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMD-- 333
R ++G S + TL +LN +DG + R+ ++ TN + +DPALLRPGR+D
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTL---HRVKMIMATNRPDTLDPALLRPGRLDRK 298
Query: 334 VHINM 338
+HI +
Sbjct: 299 IHIEL 303
Score = 95 (38.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L E ++RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 144 ELREVI--ELP--LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 108 (43.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 206 EHPS-TF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
E P T+ D +D + KQ I + ++ L + Y+++G RG LLYGPPGTGK+ L+
Sbjct: 159 EKPDVTYADVGGLDMQ-KQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLV 217
Query: 264 AAMAN 268
A+AN
Sbjct: 218 KAVAN 222
Score = 86 (35.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 36/148 (24%), Positives = 69/148 (46%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
A G++ ++ L +LN +DG + + ++I+ TN + +DPALLRPGR+D I
Sbjct: 278 AQTGADREVQRILLELLNQMDG-FEQTSNVKVIM-ATNRADTLDPALLRPGRLDRKIEFP 335
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLV 399
+ L + + K S S +++ LI + V +M+ +
Sbjct: 336 SLRDRRERRLIFSTIASK-MSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRY 394
Query: 400 NFLKRKRIQADESKNNDVK-GEEANEVE 426
N ++ +++ + VK G+EA+ +E
Sbjct: 395 NIIQS---DLEDAYSAQVKTGQEADRLE 419
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 112 (44.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 276 DRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVH 335
DR D ++ ++ LT +LN IDG+ G +IV TN IDPALLRPGR+D H
Sbjct: 607 DRDGDSSTTAASNVLT--SLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRH 662
Query: 336 I 336
I
Sbjct: 663 I 663
Score = 88 (36.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 204 NLEHPSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
NL T+D + + +++ ++ L + G + RG LL+GPPGTGK+ L+
Sbjct: 221 NLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLL 280
Query: 264 AAMANYLS 271
+AN ++
Sbjct: 281 RCVANSIT 288
Score = 86 (35.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 203 INLEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSS 261
I LE P + + ELK+ +++ + L + ++ +G + +G LLYGPPG K+
Sbjct: 489 IFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTL 548
Query: 262 LIAAMA-----NYLSVE 273
A+A N+L+V+
Sbjct: 549 TAKALATESGLNFLAVK 565
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 101 (40.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + + G +II+ TN + +DPALLR GR+D I
Sbjct: 281 RFSEGTSADREIQRTLMELLNQMDG-FDTLGQTKIIM-ATNRPDTLDPALLRAGRLDRKI 338
Query: 337 NMSYCTVHG----FKVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVAEELMKA--- 388
+ G FK+ S + +G+ F + E ++ +D A++ + +A
Sbjct: 339 EIGLPNEAGRLEIFKIHTSK-VAKQGE----F-DFEAAVKMSDGFNGADIRNVVTEAGFF 392
Query: 389 ---DDADVALEGLVNFLKRKRIQADESK 413
DD D L+ + +K R AD K
Sbjct: 393 AIRDDRDYILQN--DLMKAVRKVADVKK 418
Score = 93 (37.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
EL+++I +L L+ E + RVG +G LLYGPPGTGK+ L A+A
Sbjct: 183 ELREVI--ELP--LKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 107 (42.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K+ L+++ FLR + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEE-LEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 270 LSV 272
V
Sbjct: 213 AGV 215
Score = 91 (37.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 281 GASVGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
GA G + TL+ +L +DG ++ G II+ TN K+ +DPALLRPGR D ++
Sbjct: 265 GAGYGGGNDEREQTLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 338 MSYCTVHG 345
+ + G
Sbjct: 323 VGNPDIKG 330
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 107 (42.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K+ L+++ FLR + + R+G +G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGIDEAKEE-LEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGE 212
Query: 270 LSV 272
V
Sbjct: 213 AGV 215
Score = 91 (37.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 281 GASVGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
GA G + TL+ +L +DG ++ G II+ TN K+ +DPALLRPGR D ++
Sbjct: 265 GAGYGGGNDEREQTLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 338 MSYCTVHG 345
+ + G
Sbjct: 323 VGNPDIKG 330
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 110 (43.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/62 (37%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 158 STYDMIGGLDQQIKE-IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 268 NY 269
++
Sbjct: 217 HH 218
Score = 82 (33.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 277 RQNDGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R G+ G S + T+ +LN +DG +S ++ ++ TN + +D ALLRPGR+D
Sbjct: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEAS--NKIKVLMATNRIDILDQALLRPGRID 325
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 109 (43.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
KQ I + ++ L E Y+++G RG LLYGPPGTGK+ L A+AN+
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANH 212
Score = 82 (33.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 267 AQTGADREVQRILMELLNQMDGFDQTVNVK--VIMATNRADTLDPALLRPGRLD 318
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 112 (44.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 206 EHP--STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
E P S D +D + KQ + + ++ L + + YR++G RG LLYGPPGTGK+ L+
Sbjct: 127 ERPDVSYADVGGLDVQ-KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLV 185
Query: 264 AAMAN 268
A+AN
Sbjct: 186 KAVAN 190
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM- 338
A G++ ++ L +L +DG G ++ TN + +DPALLRPGR+D I
Sbjct: 246 AQTGADREVQRILIELLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFP 303
Query: 339 SY 340
SY
Sbjct: 304 SY 305
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 103 (41.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R ++G S + TL +LN +DG + + G ++I+ TN + +DPALLRPGR+D
Sbjct: 251 RFSEGTSADREIQRTLMELLNQMDG-FDALGQVKMIM-ATNRPDTLDPALLRPGRLD 305
Score = 88 (36.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
EL+++I +L L + + RVG + +G LLYGPPGTGK+ L A+A+ +
Sbjct: 153 ELREVI--ELP--LLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQM 200
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 105 (42.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 275 KDRQNDGASVGSNTK--LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRM 332
K+R GA G+N + TL+ +L +DG +S D+ +++ TN + +D AL+RPGR
Sbjct: 394 KERGKGGALGGANDEREATLNQLLVEMDGFTTS--DQVVVLAGTNRPDVLDNALMRPGRF 451
Query: 333 DVHINMSYCTVHG 345
D HI + V+G
Sbjct: 452 DRHIQIDSPDVNG 464
Score = 93 (37.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
+F +A E KQ I++ + FL+ Y ++G RG +L GPPGTGK+ L A A
Sbjct: 286 SFKNVAGCDEAKQEIMEFV-HFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 270 LSV 272
+V
Sbjct: 345 ANV 347
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 102 (41.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + + G ++I+ TN + +DPALLRPGR+D I
Sbjct: 248 RFSEGTSADREIQRTLMELLNQLDG-FDNLGKVKMIM-ATNRPDVLDPALLRPGRLDRKI 305
Query: 337 NM 338
+
Sbjct: 306 EI 307
Score = 89 (36.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
L E + RVG +G LLYGPPGTGK+ L A+A+
Sbjct: 159 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 100 (40.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K+ +++ +D FL+ ++ + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 270 LSV 272
+V
Sbjct: 215 ANV 217
Score = 96 (38.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGF-KVL 349
TL+ +L +DG S+ G +I+ TN + +DPALLRPGR D + +S ++G K++
Sbjct: 280 TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKII 337
Query: 350 A 350
A
Sbjct: 338 A 338
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 100 (40.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K+ +++ +D FL+ ++ + ++G +G LL G PGTGK+ L A+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVD-FLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 270 LSV 272
+V
Sbjct: 215 ANV 217
Score = 96 (38.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGF-KVL 349
TL+ +L +DG S+ G +I+ TN + +DPALLRPGR D + +S ++G K++
Sbjct: 280 TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKII 337
Query: 350 A 350
A
Sbjct: 338 A 338
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 104 (41.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALLRPGRMDVHINMSYCTVHGFKVL 349
TL+ +L +DG S+ G ++VF TN + +DPALLRPGR D I + + G K +
Sbjct: 475 TLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDI 531
Query: 350 ASNYLGIKGKSHSLFGEIEGLIQS-TDVTPAEVAEELMKADDADVALEG 397
+L K+ L GE+E + + +TP AD A+V EG
Sbjct: 532 FMVHL----KNIKLDGEMEEIAKKLATLTPG-----FSGADIANVCNEG 571
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 209 STF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
+TF D MD E K+ I++ + FL+ Y+++G +G +L GPPGTGK+ L A A
Sbjct: 351 TTFKDVAGMD-EAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATA 408
Query: 268 NYLSV 272
V
Sbjct: 409 GEAGV 413
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 98 (39.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
Score = 94 (38.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 186 DIGGLDSQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 108 (43.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 275 KDRQNDGASVGSNTKL--TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRM 332
K RQ S G+N + TL+ +L +DG + D +++ TN + +D ALLRPGR
Sbjct: 454 KARQKGNFS-GANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRF 510
Query: 333 DVHINMSYCTVHGFKVLAS---NYLGIKGKSHSLFGEIEGL---IQSTDVTPA--EVAEE 384
D HIN+ + G K + + ++L + G+ L + L D+ E A
Sbjct: 511 DRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALI 570
Query: 385 LMKADDADVALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKA 430
++D+ V L ++R I E K+ + EE V + +A
Sbjct: 571 AARSDEDAVKLNHFEQAIERV-IGGVERKSKLLSPEEKKVVAYHEA 615
Score = 90 (36.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
F +A E K+ I++ + FL+ Y ++G RG +L GPPGTGK+ L A A
Sbjct: 347 FKDVAGCDEAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEA 405
Query: 271 SV 272
V
Sbjct: 406 GV 407
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 101 (40.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + G ++I+ TN + +DPALLRPGR+D I
Sbjct: 248 RFSEGTSADREIQRTLMELLNQLDG-FDQLGKVKMIM-ATNRPDVLDPALLRPGRLDRKI 305
Query: 337 NM 338
+
Sbjct: 306 EI 307
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
L E + RVG +G LLYGPPGTGK+ L A+A+
Sbjct: 159 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 101 (40.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + G ++I+ TN + +DPALLRPGR+D I
Sbjct: 249 RFSEGTSADREIQRTLMELLNQLDG-FDELGKVKMIM-ATNRPDVLDPALLRPGRLDRKI 306
Query: 337 NM 338
+
Sbjct: 307 EI 308
Score = 89 (36.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
L E + RVG +G LLYGPPGTGK+ L A+A+
Sbjct: 160 LMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 98 (39.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 293 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVIM-ATNRIETLDPALIRPGRID 348
Score = 93 (37.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 186 DIGGLDNQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 244
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 102 (41.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 145 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 203
Query: 268 NY 269
++
Sbjct: 204 HH 205
Score = 87 (35.7 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R G+ S + T+ +LN +DG ++ + ++ TN + +DPALLRPGR+D
Sbjct: 257 RIESGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 311
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 99 (39.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST+D + + ++K+ I + ++ ++ E + +G A +G +LYGPPGTGK+ L A+A
Sbjct: 145 STYDMVGGLTKQIKE-IKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 203
Query: 268 NY 269
++
Sbjct: 204 HH 205
Score = 90 (36.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G+ G S + T+ +LN +DG +S + I+ TN + +DPALLRPGR+D
Sbjct: 259 EGSGGGDSEVQRTMLELLNQLDGFETSKNIK--IIMATNRLDILDPALLRPGRID 311
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 107 (42.7 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 206 EHPS-TF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
E P T+ D +D + KQ I + ++ L + + Y ++G RG LLYGPPGTGK+ L+
Sbjct: 165 EKPDVTYADVGGLDMQ-KQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLV 223
Query: 264 AAMAN 268
A+AN
Sbjct: 224 KAVAN 228
Score = 81 (33.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A GS+ ++ L +L +DG S + ++ TN + +DPALLRPGR+D
Sbjct: 284 AQTGSDREVQRILIELLTQMDGFDQSTNVK--VIMATNRADTLDPALLRPGRLD 335
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 96 (38.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 338
T+ +LN +DG + S GD ++I+ TN + +DPAL+RPGR+D I +
Sbjct: 316 TMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
Score = 93 (37.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 203 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 96 (38.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINM 338
T+ +LN +DG + S GD ++I+ TN + +DPAL+RPGR+D I +
Sbjct: 316 TMLELLNQLDG-FDSRGDVKVIM-ATNRIDSLDPALIRPGRIDRKIQL 361
Score = 93 (37.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYGPPGTGK+ L A+AN S
Sbjct: 203 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS 252
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 121 (47.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
+++ + L I+ D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 69 NSVVLQQGLADRIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGEL 127
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 106 (42.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
D +D + KQ I + ++ L + + Y ++G RG LLYGPPGTGK+ L+ A+AN
Sbjct: 156 DVGGLDMQ-KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 81 (33.6 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + ++I+ TN + +DPALLRPGR+D
Sbjct: 267 AQTGADREVQRILLELLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 106 (42.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
D +D + KQ I + ++ L + + Y ++G RG LLYGPPGTGK+ L+ A+AN
Sbjct: 156 DVGGLDMQ-KQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 81 (33.6 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + ++I+ TN + +DPALLRPGR+D
Sbjct: 267 AQTGADREVQRILLELLNQMDG-FDQTSTVKVIM-ATNRADTLDPALLRPGRLD 318
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 98 (39.6 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R ++G S + TL +LN +DG + + +II+ TN + +DPALLRPGR+D I
Sbjct: 246 RFSEGTSADREIQRTLMELLNQMDG-FDTLSKVKIIM-ATNRPDVLDPALLRPGRLDRKI 303
Query: 337 NM 338
+
Sbjct: 304 EI 305
Score = 89 (36.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
E + RVG +G LLYGPPGTGK+ L A+A+ L
Sbjct: 161 ELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNL 195
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 96 (38.9 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ +A E K+ L+++ +FL+ + + ++G +G LL GPPGTGK+ L A+A
Sbjct: 151 TFEDVAGVDEAKEE-LEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 270 LSV 272
V
Sbjct: 210 AGV 212
Score = 96 (38.9 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 281 GASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHIN 337
GA +G + TL+ +L +DG S+ G I++ TN + +DPALLRPGR D +
Sbjct: 262 GAGLGGGHDEREQTLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQVV 319
Query: 338 MSYCTVHG----FKV------LASNY-LGIKGKSHSLFG--EIEGLIQSTDVTPAEVAEE 384
+ V G KV LAS+ LG+ + F ++ ++ + A +
Sbjct: 320 VPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKS 379
Query: 385 LMKADDADVALEG-LVNFLKRKRIQADESKNN 415
++ D D A + L+ +R + ++E K N
Sbjct: 380 FVEMKDFDDAKDKVLMGVERRSMVISEEEKKN 411
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 104 (41.7 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 280 DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
DG+S + + L+ +LN IDG+ G +IV TN + ID ALLRPGR+D HI
Sbjct: 626 DGSSTSAANHV-LTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHI 679
Score = 100 (40.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 276 DRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVH 335
+R ND + G ++ +L +DG+ + G + +++ TN +DPAL RPGR D
Sbjct: 353 NRANDDS--GEVESRVVATLLTLMDGM-GAAG-KVVVIAATNRPNSVDPALRRPGRFDQE 408
Query: 336 INMSYCTVHG-FKVLASNYLGIKGKSHSLFGE-IEGLIQST------DVTPAEVAEELMK 387
+ + V F +L + + H L E I+ + T D+T A E +MK
Sbjct: 409 VEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLT-ALCRESVMK 467
Query: 388 ADDADVALEGLVNFLKRKRIQAD-ESKNNDVKGEEANEVEHEKAK 431
+ + ++ K D ES D++ E+ E K
Sbjct: 468 TIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPK 512
Score = 90 (36.7 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 204 NLEHPSTFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSL 262
NL P ++ + +D E++ + ++ L + + G + RG LL+GPPGTGK+ L
Sbjct: 237 NLPEPLSYAAVGGLDKEIESL-KSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTML 295
Query: 263 IAAMAN 268
+ +AN
Sbjct: 296 LRVVAN 301
Score = 86 (35.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 203 INLEHPSTF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSS 261
I LE P + + ELK + + + L E + R+G + +G LLYGPPG K+
Sbjct: 506 IFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTL 565
Query: 262 LIAAMA-----NYLSVE 273
A+A N+L+V+
Sbjct: 566 TAKALATESGINFLAVK 582
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 98 (39.6 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
FD +A E K+ L ++ FL++ E + VG +G LL GPPGTGK+ L A+A
Sbjct: 171 FDDVAGIDEAKEE-LQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 271 SV 272
V
Sbjct: 230 GV 231
Score = 94 (38.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 272 VEMKDRQNDGASVGSNT---KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG + G II+ TN + +D AL+R
Sbjct: 273 IDAVGRQR-GAGIGGGNDEREQTLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMR 329
Query: 329 PGRMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKA 388
PGR D + + G K + L + ++ L E+ I S A A
Sbjct: 330 PGRFDRQVMVDAPDYSGRKEI----LEVHARNKKLAPEVS--IDSI----ARRTPGFSGA 379
Query: 389 DDADVALEGLVNFLKRKR-----IQADESKNNDVKGEEANEVEHEKAKQL 433
D A++ E + +R++ ++ D++ + V G E + K+K+L
Sbjct: 380 DLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRL 429
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 101 (40.6 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 31/81 (38%), Positives = 41/81 (50%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D E K+ + + +D FLR + R+G RG LL GPPGTGK+ L A+A +
Sbjct: 268 DVQGVD-EAKEELEEIVD-FLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEAN 325
Query: 272 VE---MKDRQNDGASVGSNTK 289
V M Q D VG K
Sbjct: 326 VPFFFMSGSQFDEMYVGVGAK 346
Score = 92 (37.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVF--TTNHKERIDPALLRPGRMDVH 335
Q A ++ + TL+ +L +DG + +VF TN E +DPAL RPGR D H
Sbjct: 373 QKRNARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRH 432
Query: 336 INMSYCTVHG 345
I++ V G
Sbjct: 433 IHVPLPDVRG 442
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 98 (39.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/62 (33%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LL+GPPGTGK+ L A+A
Sbjct: 156 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 268 NY 269
++
Sbjct: 215 HH 216
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G+S G S + T+ +LN +DG ++ + ++ TN + +DPALLRPGR+D
Sbjct: 270 EGSSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPGRID 322
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 100 (40.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 350
T++ +L+ +DG + G I++ TN ++ +D ALLRPGR DV + +S G K +
Sbjct: 420 TINQLLSEMDGFHQNAGV--IVLGATNRRDDLDQALLRPGRFDVEVMVSTPDFTGRKEIL 477
Query: 351 SNYL 354
S YL
Sbjct: 478 SLYL 481
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ E + +G +G LL GPPGTGK+ L A+A
Sbjct: 298 TFEDVKGCDEAKQE-LKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGE 356
Query: 270 LSV 272
V
Sbjct: 357 AKV 359
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 103 (41.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/160 (26%), Positives = 75/160 (46%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG ++ G II+ TN + +DPALLR
Sbjct: 263 IDAVGRQR-GAGLGGGHDEREQTLNQLLVEMDGFGANEGI--IIIAATNRPDILDPALLR 319
Query: 329 PGRMDVHINMSYCTVHG----FKVLASN--------YLGIKGKSHSLFG-EIEGLIQSTD 375
PGR D I + V+G KV A N I ++ G ++E L+
Sbjct: 320 PGRFDRQITVDRPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAA 379
Query: 376 VTPAEVAEELMKADDADVALEGLV-NFLKRKRIQADESKN 414
+ A ++ + D D A + ++ K+ R+ +++ +N
Sbjct: 380 LVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVISEKERN 419
Score = 88 (36.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D D E ++++ ++ FL+ + VG +G LL GPPGTGK+ L A+A
Sbjct: 163 DVAGADEEKQELV--EVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAG 220
Query: 272 V 272
V
Sbjct: 221 V 221
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 112 (44.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 40/136 (29%), Positives = 67/136 (49%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++ +DG + + G+ +++ F TN +DPAL+RPGR+D I
Sbjct: 294 RFDDGAGGDNEVQRTMLELITQLDG-FDARGNIKVM-FATNRPSTLDPALMRPGRIDRKI 351
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALE 396
S V G +N L I KS S+ +I + S + P EL VA E
Sbjct: 352 EFSLPDVEG----RANILRIHAKSMSVERDIRWELISR-LCPNATGAELRS-----VATE 401
Query: 397 -GLVNFLKRKRIQADE 411
G+ R+++ ++
Sbjct: 402 AGMFAIRARRKVATEK 417
Score = 74 (31.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 247 RGYLLYGPPGTGKSSLIAAMAN 268
+G LLYGPPGTGK+ A+AN
Sbjct: 220 KGALLYGPPGTGKTLCARAVAN 241
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 96 (38.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++++ TN E +DPAL+RPGR+D
Sbjct: 296 KRYDSNSGGEREIQRTMLELLNQLDG-FDSRGDVKVLM-ATNRIESLDPALIRPGRID 351
Score = 91 (37.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D +D ++++ I + ++ L E+Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 189 DVGGLDQQIQE-IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTS 247
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 146 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 268 NY 269
++
Sbjct: 205 HH 206
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 260 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 312
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 98 (39.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
KQ + + ++ L E Y ++G G L+YGPPGTGK+ L+ A+AN V
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQV 198
Score = 87 (35.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
A G++ ++ L +LN +DG S + ++ TN + +DPALLRPGR+D I
Sbjct: 250 AQTGADREVQRILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIEFP 307
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVA 382
+++ + S + IE + TD ++ A++A
Sbjct: 308 LPDRKQKRLIFQTIISKMNVSSDV--NIESFVVRTDKISAADIA 349
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 98 (39.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 221 KQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
KQ + + ++ L E Y ++G G L+YGPPGTGK+ L+ A+AN V
Sbjct: 147 KQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQV 198
Score = 87 (35.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
A G++ ++ L +LN +DG S + ++ TN + +DPALLRPGR+D I
Sbjct: 250 AQTGADREVQRILLELLNQMDGFDKSTNVK--VIMATNRADTLDPALLRPGRLDRKIEFP 307
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVA 382
+++ + S + IE + TD ++ A++A
Sbjct: 308 LPDRKQKRLIFQTIISKMNVSSDV--NIESFVVRTDKISAADIA 349
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 152 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 268 NY 269
++
Sbjct: 211 HH 212
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 266 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 318
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 268 NY 269
++
Sbjct: 213 HH 214
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 268 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 105 (42.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 154 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 268 NY 269
++
Sbjct: 213 HH 214
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 268 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 320
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 100 (40.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E PS ++ + KQ + + ++ L Y+++G RG LLYGPPGTGK+ L
Sbjct: 143 EKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAK 202
Query: 265 AMANYLS 271
A+A++ S
Sbjct: 203 AVAHHTS 209
Score = 85 (35.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG S + ++ TN ++ +DPALLRPGR+D
Sbjct: 262 AQTGADREVQRILMELLNQMDGFDVSVNVK--VIMATNRQDTLDPALLRPGRLD 313
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 102 (41.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 275 KDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
K R S G++ + TL+ IL +DG +S D+ +++ TN + +D AL+RPGR D
Sbjct: 508 KSRSAKNFSGGNDERESTLNQILTEMDGFNTS--DQVVVLAGTNRPDVLDKALMRPGRFD 565
Query: 334 VHINMSYCTVHGFK 347
HI++ T+ G K
Sbjct: 566 RHISIDRPTMDGRK 579
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
D MD E K I++ + FL+ E ++++G RG +L GPPGTGK+ L A A
Sbjct: 403 DVAGMD-EAKVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATA 456
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 95 (38.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + ++ ++K+ I + ++ ++ E + +G +G LLYGPPGTGK+ L A+A
Sbjct: 142 STYEMVGGLEKQIKE-IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 268 NY 269
++
Sbjct: 201 HH 202
Score = 90 (36.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 271 SVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPG 330
S+ + G S S + T+ +LN +DG ++ + ++ TN + +DPALLRPG
Sbjct: 249 SIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDPALLRPG 306
Query: 331 RMD 333
R+D
Sbjct: 307 RID 309
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 100 (40.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPALLRPGR+D
Sbjct: 296 KRYDANSGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
Score = 85 (35.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS 247
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 100 (40.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + S GD ++I+ TN E +DPALLRPGR+D
Sbjct: 296 KRYDAHSGGEREIQRTMLELLNQLDG-FDSRGDVKVIL-ATNRIESLDPALLRPGRID 351
Score = 85 (35.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 198 QEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS 247
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 106 (42.4 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 39/145 (26%), Positives = 75/145 (51%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 350
TL +L +DG + + +I+ TN +DPALLRPGR D HI++ + G +
Sbjct: 416 TLLQLLTEMDGFEGN--SQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEII 473
Query: 351 SNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVAEELMKADDADVALEGLVNFLKRKRI-Q 408
+YL K H++ + + + ++T T A+++ + A A++ + N + I Q
Sbjct: 474 DHYL--KKVKHTVEVKADTIARATPGFTGADLSNLINTA-----AIKAVQNGKETISIKQ 526
Query: 409 ADESKNNDVKGE-EANEVEHEKAKQ 432
D+++++ + G N V E+A++
Sbjct: 527 IDDARDDILMGRARLNAVMSEEARR 551
Score = 88 (36.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 208 PSTFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
P++FD + E+K+ + + +D L + Y +G +G LL G PGTGK+ L A+A
Sbjct: 296 PTSFDDVKGIQEVKEELEEIVDYLLHPTK-YNSIGAKLPKGVLLSGEPGTGKTLLARAIA 354
Query: 268 NYLSV 272
V
Sbjct: 355 GEAGV 359
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 81 LYLRTKINPDTERLKVSKTSRQKNFTVSIEKGEEVTDSFQNVQ 123
L+L + +T +K + ++ + F ++ + SF +V+
Sbjct: 261 LFLVYSLTSETSTVKEANGNKPQYFAKEYDETNQTPTSFDDVK 303
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 98 (39.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 271 SVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPG 330
SV K R N G S G ++ +S +L +DG+ S GD +V TN + +D ALLRPG
Sbjct: 918 SVAPK-RGNQGDSGGVMDRI-VSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPG 975
Query: 331 RMD 333
R D
Sbjct: 976 RFD 978
Score = 96 (38.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
+K ILD +D L+ E + G + G L YGPPGTGK+ L A+A S+
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSL 874
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 98 (39.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 271 SVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPG 330
SV K R N G S G ++ +S +L +DG+ S GD +V TN + +D ALLRPG
Sbjct: 918 SVAPK-RGNQGDSGGVMDRI-VSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPG 975
Query: 331 RMD 333
R D
Sbjct: 976 RFD 978
Score = 96 (38.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
+K ILD +D L+ E + G + G L YGPPGTGK+ L A+A S+
Sbjct: 823 VKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSL 874
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 141 STYEMIGGLDKQIKE-IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 268 NY 269
++
Sbjct: 200 HH 201
Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G S G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 254 EGGSGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 306
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 99 (39.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 39/138 (28%), Positives = 61/138 (44%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKV 348
K+TL+ +L +DG + G I+V TN E +D AL+RPGR D HI + V G +
Sbjct: 344 KMTLNQMLVELDGFKQNEGI--IVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 401
Query: 349 LASNYLG--IKGKSHSLFGEIEGL--IQSTDVTPAEVAEELMKADDA--DVALEGLVNFL 402
+ +++ +K + L G D+ L A D DV + L F
Sbjct: 402 ILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDL-EFA 460
Query: 403 KRKRIQADESKNNDVKGE 420
K + + E K+ + E
Sbjct: 461 KDRIMMGSERKSAVISDE 478
Score = 90 (36.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 225 LDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
L+++ +LR + + R+G +G LL GPPGTGK+ L A+A V
Sbjct: 239 LEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGV 286
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 99 (39.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ + + ++ ++ E + +G + +G LLYGPPGTGK+ L A+A
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 268 NY 269
++
Sbjct: 235 HH 236
Score = 84 (34.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 36/132 (27%), Positives = 59/132 (44%)
Query: 280 DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
+G S + T+ +LN +DG S+ + ++ TN + +D ALLRPGR+D I
Sbjct: 290 EGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLV 399
V L I + +L I+ L +TD+ AE +KA V E +
Sbjct: 348 NPNVEA----RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAE--VKA----VCTEAGM 397
Query: 400 NFLKRKRIQADE 411
L+ +R+ +
Sbjct: 398 FALRERRVHVTQ 409
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 101 RQKNFTVSI--EKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHK 150
R KN + I E E+ ++ N + SG KRY+EL +
Sbjct: 9 RSKNLSEGIKNEISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEE 60
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 99 (39.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ + + ++ ++ E + +G + +G LLYGPPGTGK+ L A+A
Sbjct: 176 STYEMVGGLDQQVKE-VKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 268 NY 269
++
Sbjct: 235 HH 236
Score = 84 (34.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 36/132 (27%), Positives = 59/132 (44%)
Query: 280 DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
+G S + T+ +LN +DG S+ + ++ TN + +D ALLRPGR+D I
Sbjct: 290 EGEHGDSEVQRTMMELLNQLDGFESTQNIK--VIMCTNRIDILDEALLRPGRIDRKIEFP 347
Query: 340 YCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLV 399
V L I + +L I+ L +TD+ AE +KA V E +
Sbjct: 348 NPNVEA----RMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAE--VKA----VCTEAGM 397
Query: 400 NFLKRKRIQADE 411
L+ +R+ +
Sbjct: 398 FALRERRVHVTQ 409
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 101 RQKNFTVSI--EKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHK 150
R KN + I E E+ ++ N + SG KRY+EL +
Sbjct: 9 RSKNLSEGIKNEISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEE 60
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 103 (41.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + ++ +LK I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 269 ----YLSV 272
Y+SV
Sbjct: 410 EVGAYVSV 417
Score = 86 (35.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + R++V TN + +D AL RPGR D I +
Sbjct: 471 KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 103 (41.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + ++ +LK I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLNSQLKA-IREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 269 ----YLSV 272
Y+SV
Sbjct: 410 EVGAYVSV 417
Score = 86 (35.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + R++V TN + +D AL RPGR D I +
Sbjct: 471 KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Score = 72 (30.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+ + G+ L+ +L +DG+ + ++ TN +RID AL+RPGR+D
Sbjct: 736 RGSSSGAGNVADRVLAQLLTEMDGI-EQLKNVTVLA-ATNRPDRIDKALMRPGRID 789
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 103 (41.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 147 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 204
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 205 EFSLPDLEG 213
Score = 73 (30.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 31 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 90
Query: 265 AMAN 268
A+AN
Sbjct: 91 AVAN 94
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 107 (42.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + ++ +LK+ I + ++ L++ E ++ G + RG LLYGPPGTGK+ + A+AN
Sbjct: 345 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 269 ----YLSV 272
Y+SV
Sbjct: 404 EVGAYVSV 411
Score = 80 (33.2 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + +++V TN +D AL RPGR D I +
Sbjct: 465 KRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 515
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 106 (42.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + + +LK I + ++ L+R E ++ G + RG LLYGPPGTGK+ + A+AN
Sbjct: 316 TYDMIGGLSSQLKT-IRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIAN 374
Score = 80 (33.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + +++V TN +D AL RPGR D I +
Sbjct: 436 KRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEI 486
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 102 (41.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLR 328
++ RQ GA +G + TL+ +L +DG S + II+ TN + +DPALLR
Sbjct: 262 IDAVGRQR-GAGLGGGHDEREQTLNQLLVEMDGF--SANEGIIIIAATNRADILDPALLR 318
Query: 329 PGRMDVHINMSYCTVHG----FKVLASNY-----LGIKG---KSHSLFG-EIEGLIQSTD 375
PGR D I + V G KV A N + +K ++ G ++E L+
Sbjct: 319 PGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAA 378
Query: 376 VTPAEVAEELMKADDADVALEGLV-NFLKRKRIQADESKN 414
+ A ++ + A D D A + ++ K+ R+ + + +N
Sbjct: 379 LVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERN 418
Score = 83 (34.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D D E ++++ ++ FL+ + +G +G LL GPPGTGK+ L A A
Sbjct: 162 DVAGADEEKQELV--EVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAG 219
Query: 272 V 272
V
Sbjct: 220 V 220
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 96 (38.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 40/152 (26%), Positives = 71/152 (46%)
Query: 271 SVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPG 330
SV K R N G S G ++ +S +L +DG+ S+ D ++ TN + +D ALLRPG
Sbjct: 835 SVAPK-RGNQGDSGGVMDRI-VSQLLAELDGM-STDADGVFVIGATNRPDLLDEALLRPG 891
Query: 331 RMDVHINMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADD 390
R D + Y + N L + L +++ LI+ + P AD
Sbjct: 892 RFD---KLLYLGIPDTDTKQLNILEALTRKFVLDNDVK-LIELAKLCPFNYTG----ADF 943
Query: 391 ADVALEGLVNFLKR--KRIQADESKNNDVKGE 420
+ + ++N + R + ++ S++N++ GE
Sbjct: 944 YALCSDAMLNAMSRIARMVEKKVSQHNELTGE 975
Score = 94 (38.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
T+D + +K ILD +D L+ E + G + G L YGPPGTGK+ + A+A
Sbjct: 730 TWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATN 788
Query: 270 LSV 272
S+
Sbjct: 789 FSL 791
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 98 (39.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
F +A E KQ +++ + +FL+ E Y ++G RG +L GPPGTGK+ L A A
Sbjct: 372 FKDVAGMAEAKQEVMEFV-KFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 271 SV 272
V
Sbjct: 431 GV 432
Score = 90 (36.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 277 RQNDGASVGSNTK--LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDV 334
+++ G + G+N + TL+ +L +DG +S D +++ TN + +D AL+RPGR D
Sbjct: 480 QRSKGNATGANDERETTLNQLLVEMDGFDTS--DHVVVLAGTNRPDILDRALMRPGRFDR 537
Query: 335 HINMSYCTVHGFKVLASNYL 354
H+++ + G K + +L
Sbjct: 538 HVHIDNPELLGRKEIFDVHL 557
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + GD ++I+ TN E +DPAL+RPGR+D
Sbjct: 290 KRYDSNSGGEREIQRTMLELLNQLDG-FDDRGDVKVIM-ATNKIETLDPALIRPGRID 345
Score = 88 (36.0 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 192 QEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 241
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 99 (39.9 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 210 TFDTL-AMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
TFD + MD E K + + +D +L+ E Y R+G +G LL GPPGTGK+ L A+A
Sbjct: 246 TFDDVRGMD-EAKLEVEEIVD-YLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAG 303
Query: 269 YLSV 272
V
Sbjct: 304 EAQV 307
Score = 87 (35.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLA 350
T++ +L+ +DG + G I++ TN + +D ALLRPGR DV + + + G +V
Sbjct: 368 TINQLLSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAG-RVDI 424
Query: 351 SNYLGIKGKSHSLFGEIEGLIQ---STDVTPAEVAEELMKAD---DADVALEGLVNFLK- 403
N+ + HS G I+ + ST T A++ + +A D A+E + +L
Sbjct: 425 FNFY-LSKIVHS--GGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDE 481
Query: 404 -RKRIQADESKNND-VKGEEANE--VEHEKAKQL 433
R R+ ++ + EEAN HE L
Sbjct: 482 ARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTL 515
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ +A E K+ +++ +D FL+ ++ ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 270 LSV 272
+V
Sbjct: 213 ANV 215
Score = 87 (35.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 345
TL+ +L +DG S+ G II+ TN + +D ALLRPGR D + +S ++G
Sbjct: 278 TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTISIPDING 330
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 97 (39.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ +A E K+ +++ +D FL+ ++ ++++G +G LL G PGTGK+ L A+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVD-FLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 270 LSV 272
+V
Sbjct: 213 ANV 215
Score = 87 (35.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 345
TL+ +L +DG S+ G II+ TN + +D ALLRPGR D + +S ++G
Sbjct: 278 TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQVTISIPDING 330
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 104 (41.7 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 203 INLEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSS 261
+N E P F +A E K+ + + +D FL+ E Y ++G +G LL GPPGTGK+
Sbjct: 168 VNSEKPKVKFSDVAGVEEAKEEVKEIVD-FLKYPERYIKLGAKIPKGLLLVGPPGTGKTL 226
Query: 262 LIAAMANYLSV 272
L A+A V
Sbjct: 227 LAKAVAGEADV 237
Score = 80 (33.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 275 KDRQNDGASVGSNTK-LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
K R G G++ + TL+ +L +DG + I++ TN E +D ALLRPGR D
Sbjct: 284 KSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPV-IVLAATNRPEVLDAALLRPGRFD 342
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 94 (38.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF +A E K+ + + ++ FLR + ++++G +G LL GPPGTGK+ L A+A
Sbjct: 155 TFHDVAGIDEAKEELAEIVE-FLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 213
Query: 270 LSV 272
V
Sbjct: 214 AKV 216
Score = 90 (36.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHG 345
TL+ +L +DG ++ G II+ TN + +DPALLRPGR D I +S + G
Sbjct: 279 TLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQITISIPDIAG 331
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 105 (42.0 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + ++ +LK+ I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 342 TYDMIGGLNSQLKE-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 269 ----YLSV 272
Y+SV
Sbjct: 401 EVGAYVSV 408
Score = 80 (33.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + +++V TN +D AL RPGR D I +
Sbjct: 462 KRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 512
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 95 (38.5 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 38/143 (26%), Positives = 65/143 (45%)
Query: 283 SVGSNTKLTLSGILNFIDGLWSSCGDER--IIVFTTNHKERIDPALLRPGRMDVHINMSY 340
S+ ++ ++ +L +DGL D R ++ TN + IDPA+LRPGR+D + +
Sbjct: 645 SLSESSSRVVNTLLTELDGL----NDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIEL 700
Query: 341 CTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALEGLVN 400
K+ + + KSH + + ++ E AD A + E V
Sbjct: 701 PNTEE-KL---DIIKTLTKSHGT--PLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVL 754
Query: 401 FLKRKRIQADESKN---NDVKGE 420
LKRK Q++E ++ ND+ E
Sbjct: 755 ALKRKFFQSEEIQSVLDNDLDKE 777
Score = 91 (37.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
++R E Y +VG + G LL+GPPG GK+ L A+AN
Sbjct: 553 IKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589
Score = 79 (32.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
E + G RG LL+GPPG GK+S+ A+A L V
Sbjct: 229 EIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQV 265
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 106 (42.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 45/149 (30%), Positives = 72/149 (48%)
Query: 287 NTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGF 346
+TK TL +L +DG + G I++ TN + +DPAL RPGR D HI + V G
Sbjct: 476 HTKKTLHQLLVEMDGFEQNEGI--IVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGR 533
Query: 347 KVLASNYLGIKGKSHSLFGEIEGLIQSTD-VTPAEVAEELMKADDADVALEGLVNFLKRK 405
+ + YL +GK S +++ + + T A++A L+ A+EG K
Sbjct: 534 EEILELYL--QGKPMSEDVDVKAIARGTPGFNGADLAN-LVNIAAIKAAVEGAE---KLS 587
Query: 406 RIQADESKNNDVKGEEANEV-EHEKAKQL 433
Q + +K+ V G E + E +K+L
Sbjct: 588 SEQLEFAKDRIVMGTERKTMFVSEDSKKL 616
Score = 79 (32.9 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF + + KQ L+++ +L+ + R+G +G LL G PGTGK+ L A+A
Sbjct: 360 TFKDVKGCDDAKQE-LEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 418
Query: 270 LSV 272
V
Sbjct: 419 AGV 421
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 97 (39.2 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ I + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 161 DIGGMDMQ-KQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 217
Score = 81 (33.6 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 272 AQTGADREVQRILLELLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 323
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 102 (41.0 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 172 STYEMVGGLDTQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVA 230
Query: 268 NY 269
++
Sbjct: 231 HH 232
Score = 76 (31.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 280 DGASVG-SNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+G+ G S + T+ +LN +DG ++ + ++ TN + +D ALLRPGR+D
Sbjct: 286 EGSRGGDSEVQRTMLELLNQLDGFEATKNIK--VIMATNRIDILDSALLRPGRID 338
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 104 (41.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 203 INLEHPS-TF-DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKS 260
+ ++HP+ +F D MD LK++ ++ ++ EFY ++G RG LL+GPPG GK+
Sbjct: 241 LEVQHPTESFRDIGGMDSTLKELC--EMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKT 298
Query: 261 SLIAAMANYLSVEMKD 276
L A++ L + + +
Sbjct: 299 FLARAISGQLKMPLME 314
Score = 82 (33.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R + G S T++ ++ +L +DG+ G I+ TN + IDPA+LRPGR+D +
Sbjct: 771 RSDGGDGNNSGTRI-VNQLLTEMDGVEERKGV--YILAATNRPDIIDPAILRPGRLDTIL 827
Query: 337 NMSY 340
+ +
Sbjct: 828 YVGF 831
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 99 (39.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TFD +A E K+ + +L FLR ++R+G G LL GPPGTGK+ L A+A
Sbjct: 154 TFDDVAGVDEAKEEV-KELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 270 LSV 272
V
Sbjct: 213 AKV 215
Score = 83 (34.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 281 GASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALLRPGRMD 333
GA +G + TL+ +L +DG G E IIV TN + +DPALLRPGR D
Sbjct: 265 GAGLGGGHDEREQTLNQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPGRFD 318
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 101 (40.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIAAM 266
R +G W RG LLYGPPGTGK+SL+ A+
Sbjct: 49 RTLGLKWPRGLLLYGPPGTGKTSLVRAV 76
Score = 84 (34.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 203 INLEHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSS 261
I +E P T+D + +LK+ + ++ ++ + ++G + RG LL+GPPG K++
Sbjct: 276 ITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTT 335
Query: 262 LIAAMAN 268
L A AN
Sbjct: 336 LAKAAAN 342
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 277 RQNDGASVGSNT--KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDV 334
++ D +S S+T + LS +L +DGL + G +++ TN ID AL+RPGR D+
Sbjct: 394 KRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGI--LVLAATNRPYAIDAALMRPGRFDL 451
Score = 71 (30.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 304 SSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
SS ++V +TN + IDPAL R GR D + +S
Sbjct: 159 SSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVS 194
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 275 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 332
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 333 EFSLPDLEG 341
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 159 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 218
Query: 265 AMAN 268
A+AN
Sbjct: 219 AVAN 222
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 115 (45.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/173 (28%), Positives = 93/173 (53%)
Query: 257 TGKSSLI-AAMANYLSVEMKDRQNDGAS-VGSNTKLTLSGILNFIDGLWSSCGDERIIVF 314
+G++SL+ + + + + R N G+S G N + ++ +L+ IDG+ S + +++
Sbjct: 350 SGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSV-VNQLLSKIDGVNSL--NNILLIG 406
Query: 315 TTNHKERIDPALLRPGRMDVHINMSYCTVHG-FKVLASNYLGIKGKSHSLFGEIEGLIQS 373
TN + ID ALLRPGR ++HI +S G ++L + ++ S+ L ++ +++
Sbjct: 407 MTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMR-MSNKLSSDVN-ILEL 464
Query: 374 TDVTP----AEVAEELMKADDADVALEGLVNFLK-RKRIQADE---SKNNDVK 418
+ TP AE+ E L++ + A E +NF K I AD+ +KN+ +K
Sbjct: 465 AERTPNFSGAEI-EGLVR-NTVSYAFERHINFNDLTKPINADDIMITKNDFMK 515
Score = 67 (28.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 215 AMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
A+D E K + + +++ +G +LYGPPGTGK+ LIA
Sbjct: 256 ALDEEFKTIFRRTFASRIYPNYIIKQLSIKHVKGMILYGPPGTGKT-LIA 304
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 115 (45.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/173 (28%), Positives = 93/173 (53%)
Query: 257 TGKSSLI-AAMANYLSVEMKDRQNDGAS-VGSNTKLTLSGILNFIDGLWSSCGDERIIVF 314
+G++SL+ + + + + R N G+S G N + ++ +L+ IDG+ S + +++
Sbjct: 350 SGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSV-VNQLLSKIDGVNSL--NNILLIG 406
Query: 315 TTNHKERIDPALLRPGRMDVHINMSYCTVHG-FKVLASNYLGIKGKSHSLFGEIEGLIQS 373
TN + ID ALLRPGR ++HI +S G ++L + ++ S+ L ++ +++
Sbjct: 407 MTNRIDLIDEALLRPGRFELHIEISLPNKEGRIQILNIHTKNMR-MSNKLSSDVN-ILEL 464
Query: 374 TDVTP----AEVAEELMKADDADVALEGLVNFLK-RKRIQADE---SKNNDVK 418
+ TP AE+ E L++ + A E +NF K I AD+ +KN+ +K
Sbjct: 465 AERTPNFSGAEI-EGLVR-NTVSYAFERHINFNDLTKPINADDIMITKNDFMK 515
Score = 67 (28.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 215 AMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
A+D E K + + +++ +G +LYGPPGTGK+ LIA
Sbjct: 256 ALDEEFKTIFRRTFASRIYPNYIIKQLSIKHVKGMILYGPPGTGKT-LIA 304
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + + +LK I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 269 ----YLSV 272
Y+SV
Sbjct: 410 EVGAYVSV 417
Score = 82 (33.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + +++V TN +D AL RPGR D I +
Sbjct: 471 KRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 80 (33.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 281 GASVGSNTKL--TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
G+S+G+ L+ +L +DG+ D I+ TN +RID AL+RPGR+D
Sbjct: 737 GSSLGAGNVADRVLAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRID 789
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 102 (41.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++ +DG + G+ +++ F TN +DPALLRPGR+D +
Sbjct: 318 RFDDGAGGDNEVQRTMLELITQLDG-FDPRGNIKVM-FATNRPNTLDPALLRPGRIDRKV 375
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSL 363
S + G +N I KS S+
Sbjct: 376 EFSLPDLEG----RANIFRIHSKSMSV 398
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 247 RGYLLYGPPGTGKSSLIAAMAN 268
+G LLYGPPGTGK+ A+AN
Sbjct: 244 KGILLYGPPGTGKTLCARAVAN 265
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 283 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 340
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 341 EFSLPDLEG 349
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 167 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 226
Query: 265 AMAN 268
A+AN
Sbjct: 227 AVAN 230
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 284 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 341
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 342 EFSLPDLEG 350
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 265 AMAN 268
A+AN
Sbjct: 228 AVAN 231
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 103 (41.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 285 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 342
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 343 EFSLPDLEG 351
Score = 73 (30.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 169 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 228
Query: 265 AMAN 268
A+AN
Sbjct: 229 AVAN 232
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 165 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 221
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 276 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 327
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 95 (38.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
D MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 166 DIGGMDIQ-KQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH 222
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + ++ TN + +DPALLRPGR+D
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVK--VIMATNRADTLDPALLRPGRLD 328
>DICTYBASE|DDB_G0276153 [details] [associations]
symbol:nsfA "N-ethylmaleimide-sensitive fusion
protein" species:44689 "Dictyostelium discoideum" [GO:0006928
"cellular component movement" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276153 GO:GO:0005524 GO:GO:0016020
GO:GO:0046872 GO:GO:0015031 GO:GO:0006909 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006928 GO:GO:0010008 GO:GO:0006935
GO:GO:0030659 HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 KO:K06027 OMA:MTSGQRV
EMBL:AF006826 RefSeq:XP_643273.1 ProteinModelPortal:Q75JI3
IntAct:Q75JI3 STRING:Q75JI3 EnsemblProtists:DDB0185052
GeneID:8620316 KEGG:ddi:DDB_G0276153 Uniprot:Q75JI3
Length = 738
Score = 110 (43.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 41/149 (27%), Positives = 72/149 (48%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
RQ D + VG + ++ +L IDG+ S + +++ TN K+ ID ALLRPGR++VH+
Sbjct: 344 RQGD-SGVGDSV---VNQLLAMIDGVESL--NNILVIGMTNRKDMIDEALLRPGRLEVHV 397
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALE 396
+S HG + + K H+ + + DV A A A++ E
Sbjct: 398 EISLPDEHGREQIF--------KIHTAKMRDQNALDK-DVNLANYAHTTRNYSGAEI--E 446
Query: 397 GLV----NFLKRKRIQADESKNNDVKGEE 421
G+V ++ +++ KN ++K E+
Sbjct: 447 GVVKSAASYAFSRQVDTKNIKNVEIKPED 475
Score = 71 (30.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 239 RRVGKAWKRGYLLYGPPGTGKSSLIA 264
+++G +G LLYGPPGTGK+ LIA
Sbjct: 250 KKLGVNHVKGMLLYGPPGTGKT-LIA 274
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 100 (40.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++ +DG + G+ +++ F TN +DPALLRPGR+D +
Sbjct: 295 RFDDGAGGDNEVQRTMLELITQLDG-FDPRGNIKVM-FATNRPNTLDPALLRPGRIDRKV 352
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEI 367
S + G +N I K+ S+ +I
Sbjct: 353 EFSLPDLEG----RANIFRIHSKTMSVEKDI 379
Score = 76 (31.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
E + ++G +G LLYGPPGTGK+ A+AN
Sbjct: 210 ERFVKLGIDPPKGILLYGPPGTGKTLCARAVAN 242
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 92 (37.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 291 TLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVL 349
T+ +LN +DG +SS DERI ++ TN + +DPAL+R GR+D I + T
Sbjct: 294 TMLELLNQLDG-FSS--DERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA---- 346
Query: 350 ASNYLGIKGKSHSLFGEI--EGLIQSTD 375
+ L I + ++ ++ E L +STD
Sbjct: 347 RARILQIHSRKMNVHPDVNFEELARSTD 374
Score = 84 (34.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMANYLSVEMKDRQNDGASVGSNT 288
+ KE + ++G +G LLYGPPGTGK+ + AA N +++ Q +G
Sbjct: 191 MTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 250
Query: 289 KL 290
KL
Sbjct: 251 KL 252
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 92 (37.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 221 KQM--ILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
KQM I + ++ L+ E + +VG +G LLYGPPGTGK+ L A+A
Sbjct: 177 KQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVA 225
Score = 84 (34.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 38/155 (24%), Positives = 71/155 (45%)
Query: 277 RQNDGASVGSN-TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD-- 333
++ D + G + TL +L +DG + + GD +II TN + +DPA+LRPGR D
Sbjct: 278 KRTDALTGGDREVQRTLMQLLAEMDG-FDARGDVKIIG-ATNRPDILDPAILRPGRFDRI 335
Query: 334 VHI-------NMSYCTVHGFKV-LAS--NYLGIKGKSHSLFG-EIEGLIQSTDVTPAEVA 382
+ + + +H K+ LA N I + G E++ + +
Sbjct: 336 IEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIREL 395
Query: 383 EELMKADDADVALEGLVNFLKRKRIQADESKNNDV 417
+ + DD A+E + +++K+++ E + DV
Sbjct: 396 RDYVTMDDFRKAVEKI---MEKKKVKVKEPAHLDV 427
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 95 (38.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G +I+ TN E +D AL+RPGR D+ + + V G
Sbjct: 395 SRQTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 452
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + + K
Sbjct: 453 EILKWYLNKIKYDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-DMVTMKE 508
Query: 407 IQADESKNNDVKGEEANEVE-HEKAKQL 433
++ SK+ + G E VE EK K +
Sbjct: 509 LEF--SKDKILMGPERRSVEIDEKNKTI 534
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + +G +G LL GPPGTGK+ L A+A
Sbjct: 276 TFEHVKGVEEAKQE-LQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 334
Query: 270 LSV 272
V
Sbjct: 335 ADV 337
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 95 (38.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G +I+ TN E +D AL+RPGR D+ + + V G
Sbjct: 400 SRQTINQLLAEMDGFKPNEGV--VIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGRT 457
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + + K
Sbjct: 458 EILKWYLNKIKYDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-DMVTMKE 513
Query: 407 IQADESKNNDVKGEEANEVE-HEKAKQL 433
++ SK+ + G E VE EK K +
Sbjct: 514 LEF--SKDKILMGPERRSVEIDEKNKTI 539
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + +G +G LL GPPGTGK+ L A+A
Sbjct: 281 TFEHVKGVEEAKQE-LQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 339
Query: 270 LSV 272
V
Sbjct: 340 ADV 342
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 95 (38.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
E+K+ + + + L K Y + + +G LLYGPPG GK+ L A+AN
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 275 KDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDV 334
K+R ++ + S+ ++ IL IDG+ I+ TN + +D AL RPGR+D
Sbjct: 1041 KERNSNTNNDASDR--VINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGRLD- 1095
Query: 335 HINMSYCTVHGFKVLASNYLGI-KGKSHSLFGEIEGLIQSTD-VTPAEVAEELMKADDAD 392
+ Y ++ K S + I K + +I + + T+ + A++ A +
Sbjct: 1096 --KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA--VN 1151
Query: 393 VALEGLVNFLK-RKRIQADESKNN 415
A++ ++ L RK+ Q ++ K N
Sbjct: 1152 EAIKETIHLLNIRKKEQEEQRKKN 1175
Score = 61 (26.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 28/132 (21%), Positives = 55/132 (41%)
Query: 49 YHYLFNPLSNNLTLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVS 108
Y +F PL+ TL+ ++ + M+++ +D L N T ++ K ++ NF S
Sbjct: 803 YTNMF-PLNRKNTLLQNDKNEMNKDSSYDKKTDALDNYKNDSTIDMEKKKNKKKSNFFFS 861
Query: 109 IEKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERA 168
+ E + NV + K K P N +K + + +K T+ + H +
Sbjct: 862 NDDEETKNKNKTNVNQKKK---KNP--NDKLDKNERRIPAYILNKLTIKAKHFQHALNIC 916
Query: 169 KEIKQEEKVVKL 180
E+ V++
Sbjct: 917 NPSSLRERQVQI 928
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 95 (38.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
E+K+ + + + L K Y + + +G LLYGPPG GK+ L A+AN
Sbjct: 941 EVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 275 KDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDV 334
K+R ++ + S+ ++ IL IDG+ I+ TN + +D AL RPGR+D
Sbjct: 1041 KERNSNTNNDASDR--VINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGRLD- 1095
Query: 335 HINMSYCTVHGFKVLASNYLGI-KGKSHSLFGEIEGLIQSTD-VTPAEVAEELMKADDAD 392
+ Y ++ K S + I K + +I + + T+ + A++ A +
Sbjct: 1096 --KLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA--VN 1151
Query: 393 VALEGLVNFLK-RKRIQADESKNN 415
A++ ++ L RK+ Q ++ K N
Sbjct: 1152 EAIKETIHLLNIRKKEQEEQRKKN 1175
Score = 61 (26.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 28/132 (21%), Positives = 55/132 (41%)
Query: 49 YHYLFNPLSNNLTLVFDEWSGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQKNFTVS 108
Y +F PL+ TL+ ++ + M+++ +D L N T ++ K ++ NF S
Sbjct: 803 YTNMF-PLNRKNTLLQNDKNEMNKDSSYDKKTDALDNYKNDSTIDMEKKKNKKKSNFFFS 861
Query: 109 IEKGEEVTDSFQNVQLQWKFVCKEPQNNHSGEKRYFELSFHKKHKQTVICYYLPHVVERA 168
+ E + NV + K K P N +K + + +K T+ + H +
Sbjct: 862 NDDEETKNKNKTNVNQKKK---KNP--NDKLDKNERRIPAYILNKLTIKAKHFQHALNIC 916
Query: 169 KEIKQEEKVVKL 180
E+ V++
Sbjct: 917 NPSSLRERQVQI 928
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 103 (41.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D I
Sbjct: 326 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLDRKI 383
Query: 337 NMSYCTVHG 345
S + G
Sbjct: 384 EFSLPDLEG 392
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 206 EHPS-TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIA 264
E P T+ + E + + + ++ L E + +G +G LL+GPPGTGK+
Sbjct: 210 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 269
Query: 265 AMAN 268
A+AN
Sbjct: 270 AVAN 273
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 209 STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
+TF +A E K+ + + L +LR ++++G +G L+ GPPGTGK+ L A+A
Sbjct: 149 TTFADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 207
Query: 269 YLSV 272
V
Sbjct: 208 EAKV 211
Score = 89 (36.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALL 327
++ RQ GA +G + TL+ +L +DG G+E IIV TN + +DPALL
Sbjct: 253 IDAVGRQR-GAGLGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALL 308
Query: 328 RPGRMDVHINMSYCTVHG 345
RPGR D + + V G
Sbjct: 309 RPGRFDRQVVVGLPDVRG 326
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 92 (37.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALL 327
++ RQ GA VG + TL+ +L +DG G+E IIV TN + +DPALL
Sbjct: 257 IDAVGRQR-GAGVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALL 312
Query: 328 RPGRMDVHINMSYCTVHG 345
RPGR D + + V G
Sbjct: 313 RPGRFDRQVVVGLPDVRG 330
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 209 STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
+TF +A E K+ + + +D +LR ++++G G L+ GPPGTGK+ L A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 269 YLSV 272
V
Sbjct: 212 EAKV 215
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 92 (37.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Query: 272 VEMKDRQNDGASVGSN---TKLTLSGILNFIDGLWSSCGDERIIVFT-TNHKERIDPALL 327
++ RQ GA VG + TL+ +L +DG G+E IIV TN + +DPALL
Sbjct: 257 IDAVGRQR-GAGVGGGHDEREQTLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALL 312
Query: 328 RPGRMDVHINMSYCTVHG 345
RPGR D + + V G
Sbjct: 313 RPGRFDRQVVVGLPDVRG 330
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 209 STFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
+TF +A E K+ + + +D +LR ++++G G L+ GPPGTGK+ L A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKELVD-YLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 269 YLSV 272
V
Sbjct: 212 EAKV 215
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 277 RQNDGASVGSNT-KLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
++ D S G + T+ +LN +DG + + D ++I+ TN E +DPAL+RPGR+D
Sbjct: 292 KRYDSQSGGEREIQRTMLELLNQLDG-FDARTDVKVIM-ATNRIETLDPALIRPGRID 347
Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
D ++ ++++M + ++ L E Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 185 DIGGLEAQVQEM-KEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTS 243
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 100 (40.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 205 LEHPST-FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI 263
L HPS F+ + + E + I L +R E Y +G RG+LL+GPPG GK+ L
Sbjct: 252 LYHPSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLA 310
Query: 264 AAMANYLSVEM 274
A+A L + M
Sbjct: 311 QAIAGELELPM 321
Score = 82 (33.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R++D S G++ ++ ++ +L +DGL + + I+ TN + IDPA+LRPGR+D
Sbjct: 689 RRSDRES-GASVRV-VNQLLTEMDGLENR--QQVFIMAATNRPDIIDPAILRPGRLD 741
Score = 67 (28.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 36/145 (24%), Positives = 56/145 (38%)
Query: 295 ILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVLASNY 353
+L +D L + +++V TN + +DPAL R GR D I C +
Sbjct: 383 LLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREI----CLGIPDEAAREKI 438
Query: 354 LGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMK-ADDADVALEGLVNFL----KRKRIQ 408
L + L G + + +TP V +LM +A + V +RK +Q
Sbjct: 439 LQTLCRKLKLPGSFD-FLHLAHLTPGYVGADLMALCREAAMCTVNRVLIKSEEQQRKYVQ 497
Query: 409 ADESKNNDVKGEEANEVEHEKAKQL 433
A + + G E E KQL
Sbjct: 498 AGGNTAEESVGIETEIPVEENTKQL 522
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 98 (39.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R +DG + + T+ I+N +DG + + G+ ++++ TN + +DPALLRPGR+D
Sbjct: 277 RFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLM-ATNRPDTLDPALLRPGRLD 331
Score = 76 (31.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 236 EFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
E + ++G +G L YGPPGTGK+ L A+AN
Sbjct: 192 EKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 101 (40.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 210 TFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
T+D + + +LK I + ++ L++ E ++ G RG LLYGPPGTGK+ + A+AN
Sbjct: 351 TYDMIGGLSSQLKA-IREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 269 ----YLSV 272
Y+SV
Sbjct: 410 EVGAYVSV 417
Score = 80 (33.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 289 KLTLSGILNFIDGLWSSCGDERIIVF-TTNHKERIDPALLRPGRMDVHINM 338
K ++ +L +DG+ S + +++V TN +D AL RPGR D I +
Sbjct: 471 KRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Score = 78 (32.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 278 QNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+ + G+ L+ +L +DG+ D I+ TN +RID AL+RPGR+D
Sbjct: 736 RGSSSGAGNVADRVLAQLLTEMDGI-EQLKDVTILA-ATNRPDRIDKALMRPGRID 789
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 98 (39.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF +A E K+ L+++ FLR E Y R+G RG LL G PGTGK+ L A+A
Sbjct: 323 TFADVAGVDEAKEE-LEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 270 LSV 272
V
Sbjct: 382 AEV 384
Score = 82 (33.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 277 RQNDGA-SVGSNTKL--TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
+ DG +GSN + TL+ +L +DG S+ I++ TN + +DPAL RPGR D
Sbjct: 431 KSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAV--IVLGATNRADVLDPALRRPGRFD 488
Query: 334 VHINMSYCTVHGFKVLASNYLGIK----GKSHSLFGEIEGLIQSTDVTPAEVA----EEL 385
+ + G + + ++ K G +L G I + +T T A++A E
Sbjct: 489 RVVTVETPDKIGRESILRVHVSKKELPLGDDVNL-GSIASM--TTGFTGADLANLVNEAA 545
Query: 386 MKADDADVALEGLVNFLK--RKRIQADESKNNDVKG-EEANEVEHE 428
+ A + ++F++ + I E K+ +KG E+A HE
Sbjct: 546 LLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHE 591
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 100 (40.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +DGA + + T+ ++N +DG + G+ ++++ TN + +DPALLRPGR+D +
Sbjct: 279 RFDDGAGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALLRPGRLDRKV 336
Query: 337 NMSYCTVHG 345
+ G
Sbjct: 337 EFGLPDLEG 345
Score = 73 (30.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 247 RGYLLYGPPGTGKSSLIAAMAN 268
+G L+YGPPGTGK+ A+AN
Sbjct: 205 KGVLMYGPPGTGKTLCARAVAN 226
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 90 (36.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E K L D+ FLR + + +G +G LL GPPGTGK+ L A+A
Sbjct: 293 TFEHVKGVEEAKNE-LQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 351
Query: 270 LSV 272
V
Sbjct: 352 ADV 354
Score = 89 (36.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G I++ TN E +D AL+RPGR D+ + + V G
Sbjct: 412 SRQTINQLLAEMDGFKPNEGV--IVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGRT 469
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL K K S + E + + T + AE+ E L+ A +G + + K
Sbjct: 470 EILEWYLK-KIKVDSAI-DAEIIARGTVGFSGAEL-ENLVNQAALKAAADGK-DLVTMKE 525
Query: 407 IQADESKNNDVKGEEANEVEHEKAKQLKT 435
++ +K+ + G E VE +K + T
Sbjct: 526 LKF--AKDKILMGPERRSVEIDKRNKTIT 552
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 93 (37.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 280 DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVF--TTNHKERIDPALLRPGRMDVHIN 337
DG+ G ++ +L IDG+ G ++ + F TN E +D ALLRPGR+D
Sbjct: 595 DGSGAGDRV---MNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLD---Q 644
Query: 338 MSYCTVHGFKVLASNYLGIKGKSHSLFG-EIEGLIQST-DVTPAEVAEELMKADDADV-- 393
+ Y + S I K I+ L Q T + A++AE +A A +
Sbjct: 645 LIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD 704
Query: 394 ALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKAKQ 432
A++ K+ +++ K N+ N+V H K +Q
Sbjct: 705 AIDA-EEMNKKSKLELSNKKENEQNETNENDV-HNKTEQ 741
Score = 87 (35.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
LR ++ +G RG LLYGPPG+GK+ + A+AN
Sbjct: 227 LRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVAN 263
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
L++MIL +D + + + G + RG L YGPPG GK+ L A+A+ S
Sbjct: 492 LREMILYPIDH----PDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECS 539
Score = 80 (33.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 285 GSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 344
G + +S +L +DG+ S G + +++ TN + IDPAL R GR D I++ +
Sbjct: 321 GEVERRVVSQLLTLMDGI-KSRG-QVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 345 G-FKVL 349
G F++L
Sbjct: 379 GRFEIL 384
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 205 LEHPSTFDTLAMDP 218
L HP F TL + P
Sbjct: 227 LRHPGLFKTLGVKP 240
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 93 (37.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 43/159 (27%), Positives = 70/159 (44%)
Query: 280 DGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVF--TTNHKERIDPALLRPGRMDVHIN 337
DG+ G ++ +L IDG+ G ++ + F TN E +D ALLRPGR+D
Sbjct: 595 DGSGAGDRV---MNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLD---Q 644
Query: 338 MSYCTVHGFKVLASNYLGIKGKSHSLFG-EIEGLIQST-DVTPAEVAEELMKADDADV-- 393
+ Y + S I K I+ L Q T + A++AE +A A +
Sbjct: 645 LIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD 704
Query: 394 ALEGLVNFLKRKRIQADESKNNDVKGEEANEVEHEKAKQ 432
A++ K+ +++ K N+ N+V H K +Q
Sbjct: 705 AIDA-EEMNKKSKLELSNKKENEQNETNENDV-HNKTEQ 741
Score = 87 (35.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
LR ++ +G RG LLYGPPG+GK+ + A+AN
Sbjct: 227 LRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVAN 263
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 220 LKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
L++MIL +D + + + G + RG L YGPPG GK+ L A+A+ S
Sbjct: 492 LREMILYPIDH----PDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECS 539
Score = 80 (33.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 285 GSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 344
G + +S +L +DG+ S G + +++ TN + IDPAL R GR D I++ +
Sbjct: 321 GEVERRVVSQLLTLMDGI-KSRG-QVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN 378
Query: 345 G-FKVL 349
G F++L
Sbjct: 379 GRFEIL 384
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 205 LEHPSTFDTLAMDP 218
L HP F TL + P
Sbjct: 227 LRHPGLFKTLGVKP 240
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 97 (39.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
TFD A +K+ L ++ R L+ E ++ G +G LL+GPPGTGK+ L A+A
Sbjct: 314 TFDDFAGQEYIKRE-LQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIA 370
Score = 83 (34.3 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 38/134 (28%), Positives = 61/134 (45%)
Query: 285 GSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVH 344
G+ + L IL +DG + + +++ TN + +DPALLR GR D I + +
Sbjct: 433 GAEREQGLLQILTEMDG-FKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKD 491
Query: 345 G----FKVLASN-YLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKAD------DAD- 392
G KV A N + + + L E+ + D T AE+ L +A D D
Sbjct: 492 GRLAILKVHARNKFFRSEDEKEELLQEVAE--NTEDFTGAELQNVLNEAGILTARKDLDY 549
Query: 393 VALEGLVNFLKRKR 406
+ E L+ LKR++
Sbjct: 550 IGREELLEALKRQK 563
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 99 (39.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 202 SINLEHPST--FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGK 259
S+NL P +D + E++Q+++D + + E + + + G LLYGPPGTGK
Sbjct: 506 SVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGK 565
Query: 260 SSLIAAMA-----NYLSVE 273
+ L +A N++SV+
Sbjct: 566 TLLAGVIARESRMNFISVK 584
Score = 82 (33.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHI 336
R +D V T ++ +L +DG+ G ++ T+ + IDPALLRPGR+D +
Sbjct: 627 RGHDNTGV---TDRVVNQLLTQLDGVEGLQGV--YVLAATSRPDLIDPALLRPGRLDKCV 681
Query: 337 NMSYCTVHGFKVLASNYLGIKGKSHSLFGEIEGLIQSTDVTPAEVAEELMKADDADVALE 396
YC +V L + S L +++ L VT + +L KA + LE
Sbjct: 682 ---YCPPPD-QVSRLEILNVLSDSLPLADDVD-LQHVASVTDSFTGADL-KALLYNAQLE 735
Query: 397 GLVNFLKRKRIQADESKNND 416
L L +Q D S ++D
Sbjct: 736 ALHGMLLSSGLQ-DGSSSSD 754
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 95 (38.5 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 212 DTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
D +MD + KQ + + ++ L E Y+++G RG L+YGPPG GK+ L +A+++
Sbjct: 115 DIGSMDIQ-KQEVWEAMELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHM 172
Score = 76 (31.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 282 ASVGSNTKLT--LSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
A G++ ++ L +LN +DG + + I+ TN K+ +DP LLRPG +D
Sbjct: 226 AQTGADREVQRILLELLNQMDGFDQNISVKAIMA--TNRKDTLDPTLLRPGHLD 277
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 88 (36.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 291 TLSGILNFIDGLWSSCGDERI-IVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFKVL 349
T+ +LN +DG +SS D+RI ++ TN + +DPAL+R GR+D I + T
Sbjct: 293 TMLELLNQLDG-FSS--DDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA---- 345
Query: 350 ASNYLGIKGKSHSLFGEI--EGLIQSTD 375
L I + ++ ++ E L +STD
Sbjct: 346 RGRILQIHSRKMNVNADVNFEELARSTD 373
Score = 85 (35.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLI---AAMANYLSVEMKDRQNDGASVGSNT 288
+ KE + ++G +G LLYGPPGTGK+ + AA N +++ Q +G
Sbjct: 190 MTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGA 249
Query: 289 KLTLSGIL 296
KL L
Sbjct: 250 KLVRDAFL 257
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 93 (37.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ +A E+K M L +L FL+ + Y+ G +G L+ GPPG GK+ + A+A
Sbjct: 150 TFNDVAGVDEVK-MELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGE 208
Query: 270 LSV 272
V
Sbjct: 209 AGV 211
Score = 82 (33.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMS 339
TL+ +L +DG + G I++ TN E +DPALLR GR D I +S
Sbjct: 271 TLNQLLTQMDGFEDNSGV--IVIAATNKIELMDPALLRSGRFDRRIFLS 317
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 97 (39.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 221 KQM--ILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
KQM I + ++ LR + ++ +G RG LLYGPPGTGK+ + A+AN
Sbjct: 229 KQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVAN 278
Score = 93 (37.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
E+KQ + + + + E + + G + RG L YGPPGTGK+ L A+AN
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Score = 82 (33.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 275 KDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
K R G + ++ +L +DG+ S ++ TN E++DPAL RPGR+D
Sbjct: 603 KARGGSVGDAGGASDRVVNQLLTEMDGMTSK--KNVFVIGATNRPEQLDPALCRPGRLD 659
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 96 (38.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSV 272
E KQ + + +D +L+ E Y+R+G RG LL GPPG GK+ L A+A V
Sbjct: 348 EAKQEVKEFVD-YLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQV 400
Score = 83 (34.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 281 GASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 340
G ++ TL+ +L +DG+ + G +++ +TN + +D ALLRPGR D HI +
Sbjct: 456 GQGSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFDRHILIDL 513
Query: 341 CTVHGFKVLASNYL 354
T+ K + +L
Sbjct: 514 PTLAERKEIFEKHL 527
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 98 (39.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 44/174 (25%), Positives = 79/174 (45%)
Query: 271 SVEMKDRQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPG 330
+V K N + + TL+ +L +DG+ ++ D I++ +TN + +D AL+RPG
Sbjct: 385 AVGKKRSTNVSGFANAEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADVLDNALMRPG 442
Query: 331 RMDVHINMSYCTVHGFKVLASNYL-GIKGKSHSLF-----GEIEGLIQSTDVTPAEVAEE 384
R+D HI + T+ + + +L G+K + F E+ D+ A + E
Sbjct: 443 RLDRHIFIDLPTLQERREIFEQHLKGLKLIQDASFYSQHLAELTPGFSGADI--ANICNE 500
Query: 385 --LMKADDADVALEGLVNF-LKRKRIQADESKNNDVKGEEANEVE--HEKAKQL 433
L A + +++ NF +R+ A +K N + E +V HE L
Sbjct: 501 AALHAAREGHKSIDTF-NFEYAVERVIAGTAKRNKILSPEERKVVAFHESGHAL 553
Score = 80 (33.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 211 FDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYL 270
F +A E K + + +D +L+ + Y ++G +G LL GPPG GK+ L A+A
Sbjct: 281 FKDVAGMHEAKMEVKEFVD-YLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 339
Query: 271 SV 272
V
Sbjct: 340 QV 341
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 87 (35.7 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 291 TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
T+ +LN +DG +S D ++I+ TN +DPAL+RPGR+D
Sbjct: 314 TMLELLNQLDGFDTSQRDIKVIM-ATNRISDLDPALIRPGRID 355
Score = 86 (35.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 222 QMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLS 271
Q I + ++ L E Y +G +G +LYG PGTGK+ L A+AN S
Sbjct: 201 QEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 250
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 92 (37.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R +DG + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLD 340
Score = 80 (33.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
L E Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 197 LLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 92 (37.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 277 RQNDGASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
R +DG + + T+ ++N +DG + G+ ++++ TN + +DPAL+RPGR+D
Sbjct: 286 RFDDGQGGDNEVQRTMLELINQLDG-FDPRGNIKVLM-ATNRPDTLDPALMRPGRLD 340
Score = 80 (33.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 232 LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 268
L E Y +G +G LLYGPPGTGK+ A+AN
Sbjct: 197 LLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 105 (42.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 22/62 (35%), Positives = 41/62 (66%)
Query: 209 STFDTLA-MDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA 267
ST++ + +D ++K+ I + ++ ++ E + +G A +G LLYGPPGTGK+ L A+A
Sbjct: 69 STYEMIGGLDKQIKE-IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 127
Query: 268 NY 269
++
Sbjct: 128 HH 129
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 89 (36.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 398 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + K
Sbjct: 456 EILKWYLNKIKFDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-EMVTMKE 511
Query: 407 IQADESKNNDVKGEEANEVE 426
++ SK+ + G E VE
Sbjct: 512 LEF--SKDKILMGPERRSVE 529
Score = 88 (36.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 279 TFEHVKGVEEAKQE-LQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 270 LSV 272
V
Sbjct: 338 ADV 340
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 405 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 462
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL K K S E E + + T + AE+ E L+ A++G + + K
Sbjct: 463 EILKWYLK-KIKVDSAV-EAEVIARGTVGFSGAEL-ENLVNQAALKAAVDGK-DMVTMKE 518
Query: 407 IQADESKNNDVKGEEANEVEHEK 429
++ +K+ + G E E +K
Sbjct: 519 LEF--AKDKILMGPERRSAEIDK 539
Score = 86 (35.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E K L ++ FLR + + +G +G LL GPPGTGK+ L A+A
Sbjct: 286 TFEHVKGVEEAKNE-LQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 344
Query: 270 LSV 272
V
Sbjct: 345 ADV 347
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 89 (36.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 398 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + K
Sbjct: 456 EILKWYLNKIKFDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-EMVTMKE 511
Query: 407 IQADESKNNDVKGEEANEVE 426
++ SK+ + G E VE
Sbjct: 512 LEF--SKDKILMGPERRSVE 529
Score = 88 (36.0 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 279 TFEHVKGVEEAKQE-LQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337
Query: 270 LSV 272
V
Sbjct: 338 ADV 340
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 93 (37.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 219 ELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLSVE 273
++K ILD + L K+ + G + G LLYGPPGTGK+ L A+A N+LSV+
Sbjct: 665 DVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 723
Score = 86 (35.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 281 GASVGSNTKL--TLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMD 333
GAS S + +S +L IDGL S + I+ +N + IDPALLRPGR D
Sbjct: 767 GASGDSGGVMDRVVSQMLAEIDGL-SDSSQDLFIIGASNRPDLIDPALLRPGRFD 820
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 89 (36.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 432 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 489
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + K
Sbjct: 490 EILKWYLNKIKFDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-EMVTMKE 545
Query: 407 IQADESKNNDVKGEEANEVE 426
++ SK+ + G E VE
Sbjct: 546 LEF--SKDKILMGPERRSVE 563
Score = 88 (36.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 313 TFEHVKGVEEAKQE-LQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 371
Query: 270 LSV 272
V
Sbjct: 372 ADV 374
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 96 (38.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 286 SNTK--LTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTV 343
SNT+ TL+ +L +DG+ ++ D I++ +TN + +D AL+RPGR+D HI + T+
Sbjct: 416 SNTEEEQTLNQLLVEMDGMGTT--DHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTL 473
Query: 344 HGFKVLASNYLGI 356
K + +L I
Sbjct: 474 QERKEIFEQHLKI 486
Score = 81 (33.6 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
+F +A E K + + +D +L+ + Y ++G +G LL GPPG GK+ L A+A
Sbjct: 298 SFKDVAGMREAKMEVKEFVD-YLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATE 356
Query: 270 LSV 272
V
Sbjct: 357 AQV 359
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 131 (51.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 37/122 (30%), Positives = 63/122 (51%)
Query: 223 MILDDLDRF-LRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANYLSVEMKDRQNDG 281
++L+D+D L R E ++G + + G+ +S + + ++ G
Sbjct: 375 VLLEDIDTAGLTRTE--EKIGHSVRTNTKTTTTTGSNATSPPSGPNEWKVTDLARALKGG 432
Query: 282 -ASVGSNTKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSY 340
S G ++LSG+LN IDG+ S G R+++ TTN E +D AL+RPGR+D+ + S
Sbjct: 433 RGSDGEQKGISLSGLLNAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFSN 490
Query: 341 CT 342
T
Sbjct: 491 AT 492
Score = 123 (48.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 200 WGSINLEHPSTFDTLAMDPELKQMILDDLDRFLRRK--EFYRRVGKAWKRGYLLYGPPGT 257
W S+ +T+ +D + K +L D++ +L+ + +Y G +RGYL +GPPGT
Sbjct: 271 WTSVANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPPGT 330
Query: 258 GKSSLIAAMANYLSVEM 274
GK+SL A+A +++
Sbjct: 331 GKTSLSFALAGVFGLDI 347
Score = 41 (19.5 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 68 SGMSRNQVFDAAELYLRTKINPDTERLKVSKTSRQ 102
S +S +++FD ++L + + RL +++T+ Q
Sbjct: 102 SVVSDDEIFDHVMVWLAAQPRTERSRLLMAETALQ 136
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 89 (36.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 451 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 508
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + K
Sbjct: 509 EILKWYLNKIKFDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-EMVTMKE 564
Query: 407 IQADESKNNDVKGEEANEVE 426
++ SK+ + G E VE
Sbjct: 565 LEF--SKDKILMGPERRSVE 582
Score = 88 (36.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 332 TFEHVKGVEEAKQE-LQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 390
Query: 270 LSV 272
V
Sbjct: 391 ADV 393
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 89 (36.4 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 288 TKLTLSGILNFIDGLWSSCGDERIIVFTTNHKERIDPALLRPGRMDVHINMSYCTVHGFK 347
++ T++ +L +DG + G II+ TN E +D AL+RPGR D+ + + V G
Sbjct: 456 SRQTINQLLAEMDGFKPNEGV--IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 513
Query: 348 VLASNYLGIKGKSHSLFGEIEGLIQST-DVTPAEVAEELMKADDADVALEGLVNFLKRKR 406
+ YL S+ EI + + T + AE+ E L+ A++G + K
Sbjct: 514 EILKWYLNKIKFDQSVDPEI--IARGTVGFSGAEL-ENLVNQAALKAAVDGK-EMVTMKE 569
Query: 407 IQADESKNNDVKGEEANEVE 426
++ SK+ + G E VE
Sbjct: 570 LEF--SKDKILMGPERRSVE 587
Score = 88 (36.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 210 TFDTLAMDPELKQMILDDLDRFLRRKEFYRRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 269
TF+ + E KQ L ++ FL+ + + +G +G LL GPPGTGK+ L A+A
Sbjct: 337 TFEHVKGVEEAKQE-LQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395
Query: 270 LSV 272
V
Sbjct: 396 ADV 398
WARNING: HSPs involving 93 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 425 0.00084 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 343
No. of states in DFA: 617 (66 KB)
Total size of DFA: 274 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.13u 0.11s 38.24t Elapsed: 00:00:02
Total cpu time: 38.16u 0.11s 38.27t Elapsed: 00:00:02
Start: Mon May 20 15:40:06 2013 End: Mon May 20 15:40:08 2013
WARNINGS ISSUED: 2